Citrus Sinensis ID: 001059
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1170 | 2.2.26 [Sep-21-2011] | |||||||
| Q9LX30 | 1241 | Probable serine/threonine | yes | no | 0.989 | 0.933 | 0.691 | 0.0 | |
| Q9HGN1 | 1576 | Serine/threonine-protein | yes | no | 0.662 | 0.491 | 0.312 | 7e-84 | |
| Q558U1 | 2258 | Probable serine/threonine | yes | no | 0.589 | 0.305 | 0.275 | 2e-68 | |
| Q550L8 | 1358 | Probable serine/threonine | no | no | 0.589 | 0.508 | 0.275 | 3e-68 | |
| P15442 | 1659 | Serine/threonine-protein | yes | no | 0.504 | 0.355 | 0.302 | 1e-61 | |
| Q9QZ05 | 1648 | Eukaryotic translation in | yes | no | 0.564 | 0.401 | 0.299 | 2e-61 | |
| Q9P2K8 | 1649 | Eukaryotic translation in | yes | no | 0.560 | 0.397 | 0.285 | 3e-58 | |
| P19525 | 551 | Interferon-induced, doubl | no | no | 0.227 | 0.482 | 0.330 | 3e-36 | |
| Q63184 | 513 | Interferon-induced, doubl | yes | no | 0.254 | 0.580 | 0.311 | 1e-35 | |
| Q9Z1Z1 | 1108 | Eukaryotic translation in | no | no | 0.164 | 0.174 | 0.355 | 5e-32 |
| >sp|Q9LX30|GCN2_ARATH Probable serine/threonine-protein kinase GCN2 OS=Arabidopsis thaliana GN=GCN2 PE=2 SV=2 | Back alignment and function desciption |
|---|
Score = 1641 bits (4249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 817/1181 (69%), Positives = 933/1181 (79%), Gaps = 23/1181 (1%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
MGYED D+SA+L+VRCLPGYPYKCPKLQITPE+GLT +DA+ LL LL+DQANSNAREGRV
Sbjct: 73 MGYEDTDISAMLIVRCLPGYPYKCPKLQITPEQGLTTADAEKLLSLLEDQANSNAREGRV 132
Query: 61 MIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASKSCSSKVPFVYGF 119
MIFNLVEAAQEFLSEI+P ESVP L S+Q E +S +KSCS PFVYGF
Sbjct: 133 MIFNLVEAAQEFLSEIIPESHDEESVPCLTAHRSTQFIEQPMLSNIAKSCSGG-PFVYGF 191
Query: 120 IDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGT 179
IDLFSG ++ +W L DENRG+V SV SH D S ++ +K DKN+K +
Sbjct: 192 IDLFSGLEDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHQKPDKNLKRFEDHAKEEVA 249
Query: 180 ALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDSLLQDHGSNNDGG 238
P AKL+TV+EEN DD S S ++ + VE+G+ + E ++S LQD + +D
Sbjct: 250 LPAPIAKLNTVQEENVDDTSISSFDSSKST---DDVESGLFQNEKKESNLQDDTAEDDST 306
Query: 239 DTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGI 298
++E + L S+S SL QDQ Q +KDL++VHLLR+AC S G L DALPQI EL+ LGI
Sbjct: 307 NSESESLGSWSSDSLAQDQVPQISKKDLLMVHLLRVACTSRGPLADALPQITDELHELGI 366
Query: 299 FSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFE 358
SE DLASK S FN+TF F+Q M S+ V QFW+P DS PN SLPSSRYLNDFE
Sbjct: 367 LSEEVLDLASKSSPDFNRTFEHAFNQNMASTSVPQFWEPPSDSCEPNASLPSSRYLNDFE 426
Query: 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
EL+PLG GGFGHVVLCKNKLDGR YAVKKIRLKDK +PVN RI+REVATLSRLQHQHVVR
Sbjct: 427 ELKPLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKEIPVNSRIVREVATLSRLQHQHVVR 486
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
YYQAWFETGV D + WGS T SS FS A S ++ Q+N LESTYLYIQMEYCPR
Sbjct: 487 YYQAWFETGVVDPFAGANWGSKTAGSSMFSYSGAVSTEIPEQDNNLESTYLYIQMEYCPR 546
Query: 479 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
TLRQVFESY+HFDK+ AWHL RQIVEGLAHIHGQGIIHRD TPNNIFFDARNDIKIGDFG
Sbjct: 547 TLRQVFESYNHFDKDFAWHLIRQIVEGLAHIHGQGIIHRDFTPNNIFFDARNDIKIGDFG 606
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598
LAKFLKLEQLDQD F TD G VD TGQ GTYFYTAPEIEQ WPKIDEKADMYSLG+V
Sbjct: 607 LAKFLKLEQLDQDGGFSTDVAGSGVDSTGQAGTYFYTAPEIEQDWPKIDEKADMYSLGVV 666
Query: 599 FFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658
FFELWHPF TAMER ++L++LK KGELP WV +F EQ SLLRRLMSPSPSDRPSATELL
Sbjct: 667 FFELWHPFGTAMERHVILTNLKLKGELPLKWVNEFPEQASLLRRLMSPSPSDRPSATELL 726
Query: 659 QDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK-HHAGTLRLNRDNTS 717
+ A PP+ME ELLDNILR+M +SED+S+YD+VVS IFDEE L+MK H + RL D+ S
Sbjct: 727 KHAFPPRMESELLDNILRIMQTSEDSSVYDRVVSVIFDEEVLEMKSHQSSRSRLCADD-S 785
Query: 718 SIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLL 777
IQY++++TELRDYVV++TKE+FRQHCAKHLE+ PM LL DCPQF R TVKLLT+GGD+L
Sbjct: 786 YIQYTEINTELRDYVVEITKEVFRQHCAKHLEVIPMRLLSDCPQFSRKTVKLLTNGGDML 845
Query: 778 ELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEA 837
EL +ELRLPF+ W NQKSSFKRYEIS VYRRAIGHSPPN LQ DFDI+GG +LTEA
Sbjct: 846 ELCYELRLPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTLSLTEA 905
Query: 838 EVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQS 897
EVLKV +DI T FH SCDIHLNHGDLL+AIWSWAGIKAEHR KVAELL+MMGSLRPQS
Sbjct: 906 EVLKVIVDITTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAEHRRKVAELLSMMGSLRPQS 965
Query: 898 SEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKAL 957
SE K KWV IRRQLLQEL L EAVVNRLQTV RFCG ADQALPRLRGAL AD+PTRKAL
Sbjct: 966 SERKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRADRPTRKAL 1025
Query: 958 DEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1012
DEL YLR+WRIE++++ID LMPP ESYHRNLFFQVF KE T +G LLAVGG
Sbjct: 1026 DELSNLLTYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSNDGVLLAVGG 1085
Query: 1013 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSR 1072
RYD+L+ + DRE+ + N P VG SLALETI QH P+D +P+RNE TSVLVCSR
Sbjct: 1086 RYDWLVQEVCDREH-----KMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLVCSR 1140
Query: 1073 GGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGA---Q 1129
GGGGLLV+RMELVAELWE++IKA+FVP PDPSLTEQYEYA+EH+IKCLVI+T++G Q
Sbjct: 1141 GGGGLLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGVAQNQ 1200
Query: 1130 KGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1170
VKVRHL++KKEK V RE LV+FLLDA+A QFRNPS+WS
Sbjct: 1201 IEFVKVRHLELKKEKVVGREELVKFLLDAMAVQFRNPSVWS 1241
|
Protein kinase that may be involved in the phosphorylation of the alpha subunit of eIF-2. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1 |
| >sp|Q9HGN1|GCN2_SCHPO Serine/threonine-protein kinase gcn2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gcn2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 313 bits (801), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 290/928 (31%), Positives = 424/928 (45%), Gaps = 153/928 (16%)
Query: 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL--KDKSLPVNDRILREVATL 408
SRY DFEEL+ LG GGFG VV KN++DGR YAVKK+ L DK N RILREV TL
Sbjct: 550 SRYETDFEELEFLGRGGFGEVVKVKNRIDGRFYAVKKLVLLSDDKE---NSRILREVMTL 606
Query: 409 SRLQHQHVVRYYQAWFETGV----------------------ADFDGDSMWGSGTLASST 446
SRL H+HVVRYY AW ET DF S + L+S
Sbjct: 607 SRLHHEHVVRYYTAWVETEANDTVTEIISSDSESLSQSLNMAVDFRQSSSLPADKLSSLD 666
Query: 447 --FSNRAASSAD----------------------------------VTGQENKLESTYLY 470
F + SSAD V QEN L +T LY
Sbjct: 667 IHFEDDYNSSADEEDPEASDISFQYSNTSDKEGSSDKDSSIEEASSVKTQENGLNAT-LY 725
Query: 471 IQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
IQMEYC + +L+ + D + W LFRQI+E LA+IH +G++HRDL P NIF D
Sbjct: 726 IQMEYCEKLSLQDIIR--DKIPVDEMWRLFRQILEALAYIHSRGMMHRDLKPGNIFLDEN 783
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKID 587
++K+GDFGLA + Q + D + D T VGT Y APE+ + + D
Sbjct: 784 RNVKLGDFGLATENENYQDNNDKW--KNRQSADEDLTTGVGTALYVAPELLSRRNGVRYD 841
Query: 588 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSW--VAKFSEQESLLRRLMS 645
K DMYSLGI+ FE+ FST+MER ++ ++ PS ++ S + ++ L+
Sbjct: 842 AKVDMYSLGIILFEMCMTFSTSMERIRIIDTIRSPSISFPSTFPFSRASHEFKVIHCLLQ 901
Query: 646 PSPSDRPSATELLQ-DALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKH 704
P+ RPS+ ELL+ +A+PP++ E + LR++ S+ +T Y K++ +F + + +H
Sbjct: 902 HDPTKRPSSQELLESEAIPPKVGEEFIQEGLRLL-SNPNTPYYLKLLKVLFGQ--VPDRH 958
Query: 705 HAGTLRLNRDNTSSI--QYSD------LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL 756
T N S + + SD L +RD+VV+V FR+H AK E E L
Sbjct: 959 KDFTYDFNLSEESGVLSKVSDRGWDSLLACLVRDHVVKV----FRRHGAK--ERESHILF 1012
Query: 757 GDCPQFKRN--TVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGH 814
Q+ ++ +V LL G LL+L ++ LP+ R N K Y IS V+R A G
Sbjct: 1013 PKSSQYDKDQASVSLLDKNGTLLQLPYDTVLPYARNVARNAVEEEKTYLISDVFREAKGG 1072
Query: 815 SPPNRYLQGDFDIIGGASALT--EAEVLKVTMDIVTRFFH-AESCDIHLNHGDLLEAIWS 871
P + FDI + L +AE +K +++T ESC I +NH D+L +I
Sbjct: 1073 GRPKAIKEISFDITTNSDNLDWYDAETIKALDEVLTEIPSLTESC-ILINHADILSSILD 1131
Query: 872 WAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLR 931
+ + + R +L + S +R QL E + ++ L R
Sbjct: 1132 YLQVSKDKRRMATHILGQINQRLTLSQ--------VRNQLRIESLVPSTTLDDLSLFDFR 1183
Query: 932 FCGAADQALPRLRGALPADKP--TRKALDEL-----YLRIWRIEKNIYIDAL-MPPIESY 983
++ +LR + P R AL+ + LR +I +Y L + E Y
Sbjct: 1184 --ENYEEGASKLRKIFGKEMPQKMRTALNYMERVVKLLRALKISHQLYFMPLCVYNFEFY 1241
Query: 984 HRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASL 1043
L FQ ++ EK L+ GGRYD L+ R +D + A + + VG
Sbjct: 1242 DGGLMFQAINLAEK-------SELICAGGRYDKLV-RFFDPPLMRTARKKHV---VGICF 1290
Query: 1044 ALETII----------------QHYPVDFKPVRNEAG------TSVLVCSRGGGGLLVER 1081
ALE ++ +H P P G VLV S G +L E+
Sbjct: 1291 ALEKLVFSMLRYIRFHNSKQSSKHSP---SPTLKSVGPWAPRRVDVLVTSIGKDSIL-EK 1346
Query: 1082 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQ-KGLVKVRHLDV 1140
L+ ELW NI+A V SL E + I ++++ Q + VK R++
Sbjct: 1347 CSLLQELWALNIQADIVLRGASSLEEIVTHYRSEGINWVLVVRQKNTQMEHSVKARNILK 1406
Query: 1141 KKEKEVQRESLVRFLLDAIASQFRNPSL 1168
++ E++ + + +LL I + RN S+
Sbjct: 1407 NEDDEIRFDEVGMWLLGEINERKRNESM 1434
|
Phosphorylates eIF-2. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q558U1|IFKA_DICDI Probable serine/threonine-protein kinase ifkA OS=Dictyostelium discoideum GN=ifkA PE=2 SV=1 | Back alignment and function description |
|---|
Score = 261 bits (668), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 222/806 (27%), Positives = 361/806 (44%), Gaps = 116/806 (14%)
Query: 444 SSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQI 502
S SN + S + ++ E+ LYIQMEYC + TL+ + ++ +E A+ L RQI
Sbjct: 1238 SRVVSNNSKLSTSSSRKKPPKETHTLYIQMEYCSKKTLKTLIDNVGGIAEEEAFRLLRQI 1297
Query: 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK----FLKLEQLDQDAAFPTDT 558
VEGL HIH Q IIHRDL P NIF D ++KIGDFGLA K + L+ + +
Sbjct: 1298 VEGLNHIHSQQIIHRDLKPANIFIDNEQNVKIGDFGLATSGAPVSKSDDLNSSTSNTANN 1357
Query: 559 GGVS-------------------VDGTGQVGTYFYTAPEI-EQGWPKIDEKADMYSLGIV 598
+S + TG VGT FY PEI E+ K DMYSLGI+
Sbjct: 1358 INLSSSTNSTAQQTPMWDLNDENLSMTGGVGTPFYCCPEILEKNTKHYGTKVDMYSLGII 1417
Query: 599 FFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658
FFE+ F T MER +L DL+ + PP + + +Q ++R L+S P+ RPS +LL
Sbjct: 1418 FFEMCFQFQTQMERSNILRDLRDNLKFPPGFESTKPDQTQIIRSLLSRDPTQRPSTKQLL 1477
Query: 659 QDA-LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTS 717
+ LP +ME ++L ++ + ++ S++ ++ +F L H + L N S
Sbjct: 1478 ESGLLPSKMEDDILKEAIKTI-ANPTISLFSYLMEKLF---CLSNDEHIMSRYLYTSNPS 1533
Query: 718 SIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKR-----NTVKLLTH 772
+ + R+ +++F H + + I+ L P N K L
Sbjct: 1534 ---LTPMHLICREKTFSRLEKIFLNHGS--IRIDTPTLFPKNPTNSTHPGAANVAKFLDE 1588
Query: 773 GGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGAS 832
G ++ L ++L +P+ R + + KRY S VYRR+ P + DFDIIG +
Sbjct: 1589 SGTVVYLPYDLTIPWARHVVIHNIQQAKRYTFSKVYRRSQPGFSPKELYECDFDIIGPSK 1648
Query: 833 A--LTEAEVLKVTMDIVTRF-----------------FHAESCDIHLNHGDLLEAIWSWA 873
+ +++AE L++ ++I+ F + + I +NH LL++I S
Sbjct: 1649 SRHISDAETLRIIIEIMEEFKDELFGNNSGSNSGSGSGGSINYKIRINHYGLLDSILSEC 1708
Query: 874 GIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFC 933
G++ V + +A + W+ W + Q L+E L+ ++V+ + T R
Sbjct: 1709 GVEKRFFTVVYQTVAQL--------HWRLNWAQV-AQSLKEHGLSASIVSNISTY-FRQR 1758
Query: 934 GAADQALPRLRGALPADKPTRKALDELY-----LRIWRIEKNIYIDALMPPIESYHRNLF 988
G Q + +L L K + +L L++ I +D + Y+ L
Sbjct: 1759 GELAQCVTQLESLLANHKEATTGISDLKILVRNLQMINIIPRFLLDLSLIHNHQYYEGLV 1818
Query: 989 FQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETI 1048
FQ + ++ + ++ GGRYD L+ + + N SGVG +LA E I
Sbjct: 1819 FQAY-IERPTLSNPSRTEIIMSGGRYDKLIKSLHPNPSLS----NNIVSGVGVTLACEKI 1873
Query: 1049 I-------QHYPVD-FKPV---RN-------------------------EAGTSVLVCSR 1072
+ QH + F RN ++ V VCS
Sbjct: 1874 VNSVLNYRQHLLNNCFNTTYTRRNKDPPNSNNNPNNNNLNNNVSIFTKFQSHIEVFVCSL 1933
Query: 1073 GGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGL 1132
G LL E++++ ++LW IKA + S + Y E+ I +VIL + Q G
Sbjct: 1934 -GSSLLGEKLQVASQLWSAGIKADYSQTDYYSSEDIYSNCRENGIPWVVILREKAFQIGK 1992
Query: 1133 VKVRHLDVKKEKEVQRESLVRFLLDA 1158
+KV+ ++ ++E+ V R+ LV F L +
Sbjct: 1993 LKVKQIETRQERTVARKDLVDFFLKS 2018
|
Phosphorylates eIF2-alpha, from 1 to 7 hours after the onset of development or during the preaggregation state, resulting in a shift from polysomes to free ribosomes for bulk mRNA. Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q550L8|IFKB_DICDI Probable serine/threonine-protein kinase ifkB OS=Dictyostelium discoideum GN=ifkB PE=2 SV=1 | Back alignment and function description |
|---|
Score = 261 bits (666), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 222/806 (27%), Positives = 361/806 (44%), Gaps = 116/806 (14%)
Query: 444 SSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQI 502
S SN + S + ++ E+ LYIQMEYC + TL+ + ++ +E A+ L RQI
Sbjct: 338 SRVVSNNSKLSTSSSRKKPPKETHTLYIQMEYCSKKTLKTLIDNVGGIAEEEAFRLLRQI 397
Query: 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK----FLKLEQLDQDAAFPTDT 558
VEGL HIH Q IIHRDL P NIF D ++KIGDFGLA K + L+ + +
Sbjct: 398 VEGLNHIHSQQIIHRDLKPANIFIDNEQNVKIGDFGLATSGAPVSKSDDLNSSTSNAANN 457
Query: 559 GGVS-------------------VDGTGQVGTYFYTAPEI-EQGWPKIDEKADMYSLGIV 598
+S + TG VGT FY PEI E+ K DMYSLGI+
Sbjct: 458 INLSSSTNSTAQQTPMWDLNDENLSMTGGVGTPFYCCPEILEKNTKHYGTKVDMYSLGII 517
Query: 599 FFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658
FFE+ F T MER +L DL+ + PP + + +Q ++R L+S P+ RPS +LL
Sbjct: 518 FFEMCFQFQTQMERSNILRDLRDNLKFPPGFESTKPDQTQIIRSLLSRDPTQRPSTKQLL 577
Query: 659 QDA-LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTS 717
+ LP +ME ++L ++ + ++ S++ ++ +F L H + L N S
Sbjct: 578 ESGLLPSKMEDDILKEAIKTI-ANPTISLFSYLMEKLF---CLSNDEHIMSRYLYTSNPS 633
Query: 718 SIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKR-----NTVKLLTH 772
+ + R+ +++F H + + I+ L P N K L
Sbjct: 634 ---LTPMHLICREKTFSRLEKIFLNHGS--IRIDTPTLFPKNPTNSTHPGAANVAKFLDE 688
Query: 773 GGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGAS 832
G ++ L ++L +P+ R + + KRY S VYRR+ P + DFDIIG +
Sbjct: 689 SGTVVYLPYDLTIPWARHVVIHNIQQAKRYTFSKVYRRSQPGFSPKELYECDFDIIGPSK 748
Query: 833 A--LTEAEVLKVTMDIVTRF-----------------FHAESCDIHLNHGDLLEAIWSWA 873
+ +++AE L++ ++I+ F + + I +NH LL++I S
Sbjct: 749 SRHISDAETLRIIIEIMEEFKDELFGNNSGSNSGSGSGGSINYKIRINHYGLLDSILSEC 808
Query: 874 GIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFC 933
G++ V + +A + W+ W + Q L+E L+ ++V+ + T R
Sbjct: 809 GVEKRFFTVVYQTVAQL--------HWRLNWAQV-AQSLKEHGLSASIVSNISTY-FRQR 858
Query: 934 GAADQALPRLRGALPADKPTRKALDELY-----LRIWRIEKNIYIDALMPPIESYHRNLF 988
G Q + +L L K + +L L++ I +D + Y+ L
Sbjct: 859 GELAQCVTQLESLLANHKEATTGISDLKILVRNLQMINIIPRFLLDLSLIHNHQYYEGLV 918
Query: 989 FQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETI 1048
FQ + ++ + ++ GGRYD L+ + + N SGVG +LA E I
Sbjct: 919 FQAY-IERPTLSNPSRTEIIMSGGRYDKLIKSLHPNPSLS----NNIVSGVGVTLACEKI 973
Query: 1049 I-------QHYPVD-FKPV---RN-------------------------EAGTSVLVCSR 1072
+ QH + F RN ++ V VCS
Sbjct: 974 VNSVLNYRQHLLNNCFNTTYTRRNKDPPNSNNNPNNNNLNNNVSIFTKFQSHIEVFVCSL 1033
Query: 1073 GGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGL 1132
G LL E++++ ++LW IKA + S + Y E+ I +VIL + Q G
Sbjct: 1034 -GSSLLGEKLQVASQLWSAGIKADYSQTDYYSSEDIYSNCRENGIPWVVILREKAFQIGK 1092
Query: 1133 VKVRHLDVKKEKEVQRESLVRFLLDA 1158
+KV+ ++ ++E+ V R+ LV F L +
Sbjct: 1093 LKVKQIETRQERTVARKDLVDFFLKS 1118
|
Dictyostelium discoideum (taxid: 44689) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P15442|GCN2_YEAST Serine/threonine-protein kinase GCN2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GCN2 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 238 bits (608), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 206/682 (30%), Positives = 335/682 (49%), Gaps = 92/682 (13%)
Query: 469 LYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
L+IQMEYC RTL + S + + ++ W LFRQI+E L++IH QGIIHRDL P NIF
Sbjct: 784 LFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFI 843
Query: 527 DARNDIKIGDFGLAKFL--KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584
D ++KIGDFGLAK + L+ L D+ + G S + T +GT Y A E+ G
Sbjct: 844 DESRNVKIGDFGLAKNVHRSLDILKLDSQ---NLPGSSDNLTSAIGTAMYVATEVLDGTG 900
Query: 585 KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKG-ELPPSW-VAKFSEQESLLRR 642
+EK DMYSLGI+FFE+ +PFST MER +L L+ E PP + K ++ ++R
Sbjct: 901 HYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRL 960
Query: 643 LMSPSPSDRPSATELLQDA-LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLD 701
L+ P+ RP A LL LP + + E++ L+ + S+ + +V S+F++
Sbjct: 961 LIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL-SNPSSPWQQQVRESLFNQS--- 1016
Query: 702 MKHHAGTLRLNRDNT--SSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDC 759
++ T + DN+ +S ++++ LR + + ++FR+H P +
Sbjct: 1017 ---YSLTNDILFDNSVPTSTPFANI---LRSQMTEEVVKIFRKHGGIENNAPPR-IFPKA 1069
Query: 760 PQF-KRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHS--- 815
P + +N ++L GG +L+L ++L P R+ N K+Y + VYR HS
Sbjct: 1070 PIYGTQNVYEVLDKGGTVLQLQYDLTYPMARYLSKNPSLISKQYRMQHVYRPP-DHSRSS 1128
Query: 816 -PPNRYLQGDFDIIGGASA---LTEAEVLKVTMDIVTRF--FHAESCDIHLNHGDLLEAI 869
P ++ + DFDII +S+ +AE LK+ +I+T F F + LNH D+LE++
Sbjct: 1129 LEPRKFGEIDFDIISKSSSESGFYDAESLKIIDEILTVFPVFEKTNTFFILNHADILESV 1188
Query: 870 WSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 929
+++ I R V+ +L+ +G R + ++ +L +LN++ +N L+
Sbjct: 1189 FNFTNIDKAQRPLVSRMLSQVGFAR--------SFKEVKNELKAQLNISSTALNDLELFD 1240
Query: 930 LRF-CGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESY 983
R AA + L +L P K +L + YL+ + +N+ I L ++
Sbjct: 1241 FRLDFEAAKKRLYKLMIDSPHLKKIEDSLSHISKVLSYLKPLEVARNVVISPLSNYNSAF 1300
Query: 984 HRN--LFFQVFSVKEKYPATLVEGT---LLAVGGRYDYLLHRMWDREYVGYASRTNPPSG 1038
++ +F V+ +G+ ++A GGRYD L+ + R +S T
Sbjct: 1301 YKGGIMFHAVYD----------DGSSRNMIAAGGRYDTLIS-FFARPSGKKSSNTR--KA 1347
Query: 1039 VGASLALETII---QHY-------------------PVDFKPVRNEAGTSVLVCSRGGGG 1076
VG +LA ETI Q+Y VD+KP R VL+ S
Sbjct: 1348 VGFNLAWETIFGIAQNYFKLASGNRIKKRNRFLKDTAVDWKPSR----CDVLISSFSNSL 1403
Query: 1077 LLVERMELVAELWEENIKAQFV 1098
L + ++ LW++NIKA +
Sbjct: 1404 LDTIGVTILNTLWKQNIKADML 1425
|
Stimulates GCN4 translation in amino acid-starved cells by phosphorylating the alpha subunit of eIF-2 (SUI2) on 'Ser-52'. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9QZ05|E2AK4_MOUSE Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Mus musculus GN=Eif2ak4 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 238 bits (608), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 220/734 (29%), Positives = 354/734 (48%), Gaps = 73/734 (9%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
YLYIQMEYC + TLR + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 795 YLYIQMEYCEKSTLRDTIDQGLFRDTSRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 854
Query: 527 DARNDIKIGDFGLAK-----FLKLEQLDQ--DAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579
D+ + +KIGDFGLA + +Q DQ D +D G TG VGT Y +PE+
Sbjct: 855 DSDDHVKIGDFGLATDHLAFTAEGKQDDQAGDGVIKSDPSG---HLTGMVGTALYVSPEV 911
Query: 580 EQGWPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQKGELPPSWVAKF--- 633
QG K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ P + F
Sbjct: 912 -QGSTKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTS--PKFPDDFDDG 968
Query: 634 --SEQESLLRRLMSPSPSDRPSATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDK 689
++Q+S++ L++ P+ RP+A ELL+ L PPQME L +L ++ D Y
Sbjct: 969 EHTKQKSVISWLLNHDPAKRPTAMELLKSELLPPPQMEESELHEVLHHTLANIDGKAYRT 1028
Query: 690 VVSSIFDEE---TLDMKHHAGTLRLN-RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCA 745
++S IF + +D + + L+ N T+ IQ +T +R +F++H A
Sbjct: 1029 MMSQIFCQHISPAIDYTYDSDILKGNFLIRTAKIQQLVCETIVR---------VFKRHGA 1079
Query: 746 KHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 804
L P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I
Sbjct: 1080 VQL-CTPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCI 1138
Query: 805 SSVYR-RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIH 859
V+R R + P L+ FDI+ S+L AE + +I+ F + I+
Sbjct: 1139 ERVFRPRKLDRFHPKELLECAFDIVTSTTNSSLPTAETIYTIYEIIQEFPALQERNYSIY 1198
Query: 860 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAE 919
LNH LL+AI GI + +V +L + + E ++K+ L+L+
Sbjct: 1199 LNHTMLLKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFC--------NLSLSS 1250
Query: 920 AVVNRL-----QTVGLRFCGAADQALPRLR-GALPADKPTRKALDELY--LRIWRIEKNI 971
+ RL Q L+ +L + + G K + K L+++ L+ ++ +
Sbjct: 1251 NSLCRLYKFIEQKGDLQDLTPTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQV 1310
Query: 972 YIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYAS 1031
I+ + H + FQ + ++ + E +LA GGRYD L+ + + VG
Sbjct: 1311 SINLGLVYKVQQHTGIIFQFLAFSKRRQRVVPE--ILAAGGRYDLLIPKFRGPQTVGPV- 1367
Query: 1032 RTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1091
P+ VG S+A++ I +PV + +LV S G + + L +LW
Sbjct: 1368 ----PTAVGVSIAIDKIFAAVLNMEEPV-TVSSCDLLVVSVGQMS-MSRAINLTQKLWTA 1421
Query: 1092 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1151
I A+ + S E EY H+I + +++D + VKV+ + KE++ ++ L
Sbjct: 1422 GITAEIMYDWSQSQEELQEYCRHHEITYVALVSD--KEGSHVKVKSFE--KERQTEKRVL 1477
Query: 1152 VRFLLDAIASQFRN 1165
L+D + + R
Sbjct: 1478 ESDLVDHVMQKLRT 1491
|
Can phosphorylate the alpha subunit of EIF2 and may mediate translational control. Mus musculus (taxid: 10090) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|Q9P2K8|E2AK4_HUMAN Eukaryotic translation initiation factor 2-alpha kinase 4 OS=Homo sapiens GN=EIF2AK4 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 227 bits (579), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 211/738 (28%), Positives = 348/738 (47%), Gaps = 82/738 (11%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
YLYIQMEYC + TLR + + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 797 YLYIQMEYCEKSTLRDTIDQGLYRDTVRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 856
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-----------TGQVGTYFYT 575
D+ + +KIGDFGLA AF D+ G TG VGT Y
Sbjct: 857 DSDDHVKIGDFGLAT--------DHLAFSADSKQDDQTGDLIKSDPSGHLTGMVGTALYV 908
Query: 576 APEIEQGWPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQKGELPPSWVAK 632
+PE+ QG K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ P +
Sbjct: 909 SPEV-QGSTKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTS--PKFPED 965
Query: 633 F-----SEQESLLRRLMSPSPSDRPSATELLQDAL--PPQMEYELLDNILRMMHSSEDTS 685
F ++Q+S++ L++ P+ RP+ATELL+ L PPQME L +L ++ D
Sbjct: 966 FDDGEHAKQKSVISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLTNVDGK 1025
Query: 686 IYDKVVSSIFDEE---TLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQ 742
Y +++ IF + +D + + L+ N +S +++ +V + +F++
Sbjct: 1026 AYRTMMAQIFSQRISPAIDYTYDSDILKGN--------FSIRTAKMQQHVCETIIRIFKR 1077
Query: 743 HCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKR 801
H A L P+ L + ++ N L + H G L+ L +LR+PF R+ N + KR
Sbjct: 1078 HGAVQL-CTPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRIPFARYVARNNILNLKR 1136
Query: 802 YEISSVYR-RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESC 856
Y I V+R R + P L+ FDI+ S L AE++ +I+ F +
Sbjct: 1137 YCIERVFRPRKLDRFHPKELLECAFDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQERNY 1196
Query: 857 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELN 916
I+LNH LL+AI GI + +V +L + + E ++K+ L+
Sbjct: 1197 SIYLNHTMLLKAILLHCGIPEDKLSQVYIILYDAVTEKLTRREVEAKFC--------NLS 1248
Query: 917 LAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD-------KPTRKALDELY--LRIWRI 967
L+ + RL + G +P + + K K L+E+ L+ I
Sbjct: 1249 LSSNSLCRLYKF-IEQKGDLQDLMPTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLGI 1307
Query: 968 EKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYV 1027
+ + I+ + H + FQ + ++ + E +LA GGRYD L+ + + +
Sbjct: 1308 KLQVLINLGLVYKVQQHNGIIFQFVAFIKRRQRAVPE--ILAAGGRYDLLIPQFRGPQAL 1365
Query: 1028 GYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAE 1087
G P+ +G S+A++ I ++ + + +LV S G + + L +
Sbjct: 1366 GPV-----PTAIGVSIAIDKISAAV-LNMEESVTISSCDLLVVSVGQMS-MSRAINLTQK 1418
Query: 1088 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQ 1147
LW I A+ + S E EY H+I + +++D VKV+ + KE++ +
Sbjct: 1419 LWTAGITAEIMYDWSQSQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTE 1474
Query: 1148 RESLVRFLLDAIASQFRN 1165
+ L L+D + + R
Sbjct: 1475 KRVLETELVDHVLQKLRT 1492
|
Can phosphorylate the alpha subunit of EIF2 and may mediate translational control. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
| >sp|P19525|E2AK2_HUMAN Interferon-induced, double-stranded RNA-activated protein kinase OS=Homo sapiens GN=EIF2AK2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 154 bits (390), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/315 (33%), Positives = 164/315 (52%), Gaps = 49/315 (15%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 411
R+ DF+E++ +G GGFG V K+++DG+ Y +K+++ N++ REV L++L
Sbjct: 262 RFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN------NEKAEREVKALAKL 315
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H ++V Y W FD D +L SS + + ++ ++ ++ L+I
Sbjct: 316 DHVNIVHYNGCW-----DGFDYDPETSDDSLESSDYDPENSKNS------SRSKTKCLFI 364
Query: 472 QMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
QME+C + TL Q E + DK LA LF QI +G+ +IH + +IHRDL P+NIF
Sbjct: 365 QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD 424
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG--TGQVGTYFYTAPE--IEQGWP 584
+KIGDFGL LK DG T GT Y +PE Q +
Sbjct: 425 TKQVKIGDFGLVTSLK------------------NDGKRTRSKGTLRYMSPEQISSQDYG 466
Query: 585 KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644
K + D+Y+LG++ EL H TA E +DL+ G + + K +++LL++L+
Sbjct: 467 K---EVDLYALGLILAELLHVCDTAFETSKFFTDLRD-GIISDIFDKK---EKTLLQKLL 519
Query: 645 SPSPSDRPSATELLQ 659
S P DRP+ +E+L+
Sbjct: 520 SKKPEDRPNTSEILR 534
|
Following activation by double-stranded RNA in the presence of ATP, the kinase becomes autophosphorylated and can catalyze the phosphorylation of the translation initiation factor EIF2S1, which leads to an inhibition of the initiation of protein synthesis. Double-stranded RNA is generated during the course of a viral infection. In addition to serine/threonine-protein kinase activity, also has tyrosine-protein kinase activity: phosphorylates CDK1 upon DNA damage. CDK1 phosphorylation triggers CDK1 polyubiquitination and subsequent proteolysis, thus leading to G2 arrest. Homo sapiens (taxid: 9606) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 0 EC: . EC: 2 |
| >sp|Q63184|E2AK2_RAT Interferon-induced, double-stranded RNA-activated protein kinase OS=Rattus norvegicus GN=Eif2ak2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 170/347 (48%), Gaps = 49/347 (14%)
Query: 316 KTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCK 375
+ F +F + R S PS D +L R+ DFE+++ +G GGFG V K
Sbjct: 196 RDFEDIFMNGLREKRKSGVKVPSDDVLRNKYTL-DDRFSKDFEDIEEIGSGGFGQVFKAK 254
Query: 376 NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435
+++DG+ YA+K+I K + REV L+ L H ++V+Y W E D+D ++
Sbjct: 255 HRIDGKTYAIKRITYNTK------KAKREVQALAELNHANIVQYRVCW-EGEDYDYDPEN 307
Query: 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHF--DK 492
G ++ ++ L+IQME+C + TL+Q E + DK
Sbjct: 308 --------------------STNGDTSRYKTRCLFIQMEFCDKGTLQQWLEKRNRSQEDK 347
Query: 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 552
L LF QIV G+ +IH +G+IHRDL P NIF IKIGDFGLA L ++
Sbjct: 348 ALVLELFEQIVTGVDYIHSKGLIHRDLKPGNIFLVDEKHIKIGDFGLATAL------END 401
Query: 553 AFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMER 612
P T GT Y +PE + + ++ D+++LG++ EL H T E+
Sbjct: 402 GNPR---------TKYTGTPQYMSPEQKSSLVEYGKEVDIFALGLILAELLHICKTDSEK 452
Query: 613 QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
I L + G ++++SLL++L+S P +RP+ +E+L+
Sbjct: 453 -IEFFQLLRNGIFSDDIFD--NKEKSLLQKLLSSKPRERPNTSEILK 496
|
Following activation by double-stranded RNA in the presence of ATP, the kinase becomes autophosphorylated and can catalyze the phosphorylation of the translation initiation factor EIF2S1, which leads to an inhibition of the initiation of protein synthesis. Double-stranded RNA is generated during the course of a viral infection. In addition to serine/threonine-protein kinase activity, also has tyrosine-protein kinase activity: phosphorylates CDK1 upon DNA damage. CDK1 phosphorylation triggers CDK1 polyubiquitination and subsequent proteolysis, thus leading to G2 arrest. Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 0 EC: . EC: 2 |
| >sp|Q9Z1Z1|E2AK3_RAT Eukaryotic translation initiation factor 2-alpha kinase 3 OS=Rattus norvegicus GN=Eif2ak3 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 140 bits (354), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 15/208 (7%)
Query: 468 YLYIQMEYCPR-------TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520
YLYIQM+ C + R E +H + H+F QI E + +H +G++HRDL
Sbjct: 875 YLYIQMQLCRKENLKDWMNRRCSMEDREH---RVCLHIFLQIAEAVQFLHSKGLMHRDLK 931
Query: 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580
P+NIFF + +K+GDFGL + ++ +Q P TGQVGT Y +PE
Sbjct: 932 PSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATH---TGQVGTKLYMSPEQI 988
Query: 581 QGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 640
G K D++SLG++ FEL +PFST MER L+D++ + PP + K+ ++ ++
Sbjct: 989 HG-NNYSHKVDIFSLGLILFELLYPFSTQMERVRTLTDVRNL-KFPPLFTQKYPQEHMMV 1046
Query: 641 RRLMSPSPSDRPSATELLQDALPPQMEY 668
+ ++SPSP +RP AT+++++A+ +E+
Sbjct: 1047 QDMLSPSPMERPEATDIIENAVFENLEF 1074
|
Phosphorylates the alpha subunit of eukaryotic translation-initiation factor 2 (EIF2), leading to its inactivation and thus to a rapid reduction of translational initiation and repression of global protein synthesis. Serves as a critical effector of unfolded protein response (UPR)-induced G1 growth arrest due to the loss of cyclin-D1 (CCND1). Rattus norvegicus (taxid: 10116) EC: 2 EC: . EC: 7 EC: . EC: 1 EC: 1 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1170 | ||||||
| 359478149 | 1244 | PREDICTED: probable serine/threonine-pro | 0.992 | 0.933 | 0.740 | 0.0 | |
| 255585505 | 1162 | eif2alpha kinase, putative [Ricinus comm | 0.935 | 0.941 | 0.726 | 0.0 | |
| 356544520 | 1222 | PREDICTED: probable serine/threonine-pro | 0.973 | 0.932 | 0.706 | 0.0 | |
| 30694992 | 1241 | non-specific serine/threonine protein ki | 0.989 | 0.933 | 0.691 | 0.0 | |
| 334186129 | 1265 | non-specific serine/threonine protein ki | 0.989 | 0.915 | 0.691 | 0.0 | |
| 297817238 | 1242 | kinase family protein [Arabidopsis lyrat | 0.988 | 0.931 | 0.692 | 0.0 | |
| 449446446 | 1298 | PREDICTED: probable serine/threonine-pro | 0.978 | 0.882 | 0.635 | 0.0 | |
| 7801691 | 1271 | protein kinase like [Arabidopsis thalian | 0.988 | 0.909 | 0.659 | 0.0 | |
| 297743778 | 859 | unnamed protein product [Vitis vinifera] | 0.670 | 0.912 | 0.790 | 0.0 | |
| 357164402 | 1246 | PREDICTED: probable serine/threonine-pro | 0.973 | 0.914 | 0.524 | 0.0 |
| >gi|359478149|ref|XP_002264839.2| PREDICTED: probable serine/threonine-protein kinase GCN2-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1740 bits (4507), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 874/1181 (74%), Positives = 977/1181 (82%), Gaps = 20/1181 (1%)
Query: 2 GYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVM 61
GY++LDVSALLLVRCLPGYPYKCPKLQITPEKGL+K DADNLL LLQDQAN+NAREGRVM
Sbjct: 72 GYDNLDVSALLLVRCLPGYPYKCPKLQITPEKGLSKGDADNLLSLLQDQANANAREGRVM 131
Query: 62 IFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVSASKSCSSKVPFVYGFID 121
+FNLVEAAQEFLSEIVP+GQS+ +VP T++SSQ F +K CSSK P VYGFID
Sbjct: 132 VFNLVEAAQEFLSEIVPVGQSHAAVPCSNTDNSSQLFLQDVSICNKGCSSKGPMVYGFID 191
Query: 122 LFSGCGESWHWGLGIDENRGVVPSVPSHASDGSN--YEVMWRKIDKNVKPLMIPDANQGT 179
LFSG G+SWHWG +DE R + S +HASDGS Y + +K+DKN KPL + + NQG
Sbjct: 192 LFSGTGDSWHWGFEMDETR-ISSSSHAHASDGSKHGYGIEGKKLDKNTKPLTMQNTNQGQ 250
Query: 180 ALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI--KGENRDSLLQDHGSNNDG 237
P+ KLD ++EE EDD+ SIS SS S EE N K EN+D ++ + D
Sbjct: 251 LPSPTVKLDALEEEIEDDSESISFFGSSRSLREELAGNVTTEKQENKDFSPEEDTAEEDD 310
Query: 238 GDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLG 297
GD E D ES S+ S+ DQ S +EKDL++VHLLRLAC S G L DALP+I TELYNLG
Sbjct: 311 GDIESDASESLSYVSVIHDQTSHTVEKDLLMVHLLRLACASKGGLADALPEITTELYNLG 370
Query: 298 IFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDF 357
IFSE RDLA+KPSS FNKTF+ VF Q +VSSR+SQFWKP D G + SLPSSRYLNDF
Sbjct: 371 IFSEPVRDLATKPSSFFNKTFDHVFRQHVVSSRISQFWKPPSDFGGQSTSLPSSRYLNDF 430
Query: 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417
EELQPLGHGGFGHVVLCKNKLDGR YAVKKIRLKDKS PV DRILREVATLSRLQHQHVV
Sbjct: 431 EELQPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSPPVYDRILREVATLSRLQHQHVV 490
Query: 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 477
RYYQAWFETGV+ GD+ WGS T ASS+FS + ASSADV ENKLESTYLYIQMEYCP
Sbjct: 491 RYYQAWFETGVSGSFGDTTWGSMTPASSSFSYKGASSADVNVHENKLESTYLYIQMEYCP 550
Query: 478 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 537
RTLRQ+FESY HFDKELAWHLFRQIVEGL HIHGQGIIHRDLTPNNIFFDARNDIKIGDF
Sbjct: 551 RTLRQMFESYSHFDKELAWHLFRQIVEGLVHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 610
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597
GLAKFLKLEQLDQD P DT GVSVD TGQVGTYFYTAPEIEQGWPKIDEKADMYSLG+
Sbjct: 611 GLAKFLKLEQLDQDPGVPPDTTGVSVDRTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGV 670
Query: 598 VFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657
VFFELWHPF TAMER IVL+DLKQKGELP SWVA+F EQ SLL+ LMSPSPSDRP ATEL
Sbjct: 671 VFFELWHPFGTAMERSIVLNDLKQKGELPSSWVAEFPEQASLLQHLMSPSPSDRPFATEL 730
Query: 658 LQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKH--HAGTLRLNRDN 715
LQ A PP+MEYELLDNILR M +SEDT +YDKVV++IFD+E L K+ H G LRL D+
Sbjct: 731 LQHAFPPRMEYELLDNILRTMQTSEDTGVYDKVVNAIFDKEMLSAKNLQHFGRLRLVGDD 790
Query: 716 TSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGD 775
TSSIQY+D DTELRD+V +VT+E+FR HCAK LE+ P+ LL DCPQ RNTVKLLTHGGD
Sbjct: 791 TSSIQYTDSDTELRDHVSEVTREVFRHHCAKRLEVVPIRLLDDCPQTIRNTVKLLTHGGD 850
Query: 776 LLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALT 835
++EL HELRLPF+ W I+NQKSSFKRYE+S VYRRAIGHS PNRYLQGDFD+IGGA+ALT
Sbjct: 851 MIELCHELRLPFVNWVITNQKSSFKRYEVSYVYRRAIGHSAPNRYLQGDFDMIGGATALT 910
Query: 836 EAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRP 895
EAEV+KV MDIVT FFH+ SC IHLNHGDLLEAIWSW GIKAEHR+KVAELL+MM SLRP
Sbjct: 911 EAEVIKVAMDIVTHFFHSNSCGIHLNHGDLLEAIWSWIGIKAEHRQKVAELLSMMSSLRP 970
Query: 896 QSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRK 955
QS E K KWVVIRRQL QELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRK
Sbjct: 971 QSPERKLKWVVIRRQLQQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRK 1030
Query: 956 ALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAV 1010
ALDEL YLR+WRIEK+++IDALMPP ESYHR+LFFQ++ +KE P +L EG LLA+
Sbjct: 1031 ALDELADLFSYLRVWRIEKHVFIDALMPPTESYHRDLFFQIYLMKENNPGSLKEGVLLAI 1090
Query: 1011 GGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVC 1070
GGRYD LL M +AS++NPP VG SLALET+IQH +D +P RNE G +VLVC
Sbjct: 1091 GGRYDQLLREMC------FASKSNPPGAVGVSLALETVIQHSSMDIRPFRNEVGINVLVC 1144
Query: 1071 SRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQ- 1129
SRGGGGLL ERMELVA LWEENIKA+FVPV DPSLTEQYEYA+EHDIKCLVI+TDTG
Sbjct: 1145 SRGGGGLLEERMELVAGLWEENIKAEFVPVSDPSLTEQYEYANEHDIKCLVIITDTGVSP 1204
Query: 1130 KGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1170
VKVRHL++KKEKEV+RE+LV+F L +IA+QFRN S+W+
Sbjct: 1205 TDFVKVRHLELKKEKEVERENLVKF-LHSIATQFRNLSIWN 1244
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255585505|ref|XP_002533444.1| eif2alpha kinase, putative [Ricinus communis] gi|223526706|gb|EEF28940.1| eif2alpha kinase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1662 bits (4304), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 835/1150 (72%), Positives = 925/1150 (80%), Gaps = 56/1150 (4%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
MGYEDLDVSALL VRCLPGYP+KCPKLQITPE GLTK+D DNLL LL DQANSNAREGRV
Sbjct: 33 MGYEDLDVSALLSVRCLPGYPFKCPKLQITPENGLTKTDVDNLLSLLHDQANSNAREGRV 92
Query: 61 MIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVSASKSCSSKVPFVYGFI 120
MIFNLVEAAQEFLSEI+P+ + E+V +S Q F+G AVS++K CSS PFVYGFI
Sbjct: 93 MIFNLVEAAQEFLSEIIPVNPTPETVLCSARDSVGQLFQGIAVSSNKICSSSWPFVYGFI 152
Query: 121 DLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSN--YEVMWRKIDKNVKPLMIPDANQG 178
DLFSG GESW WGL +D+NRGV S+ SH DGS YEV +K+DK KPLM+ D QG
Sbjct: 153 DLFSGSGESWDWGLAVDDNRGVNSSIKSHLLDGSKAGYEVQEKKLDKVTKPLMLQDPKQG 212
Query: 179 TALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGIKGENRDSLLQDHGSNNDGG 238
+ P AKLDT++EE E+DN+SIST DSS S EE VEN + G+ S ++ G+ +D
Sbjct: 213 PLVSPGAKLDTLEEETEEDNKSIST-DSSRSLTEESVENEMGGKEVTST-EESGAEDDDA 270
Query: 239 DTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGI 298
+ E + E S ASLG + ++ IEKDLI+VH+LRLAC S G DALPQI EL NLG+
Sbjct: 271 ELESEPWELPSSASLGHHEVTRTIEKDLIMVHMLRLACASKGVSADALPQITRELCNLGV 330
Query: 299 FSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFE 358
FSE DLA KPSS FN+TF+ VFHQ MVSS+VSQFWKP+ D G N SLP+SRYLNDFE
Sbjct: 331 FSEGACDLACKPSSIFNETFDHVFHQHMVSSKVSQFWKPTSDLGGSNTSLPNSRYLNDFE 390
Query: 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
ELQPLGHGGFGHVVLCKNKLDGR YAVKKIRLKDKSLPVNDRILREVATLSRLQH HVVR
Sbjct: 391 ELQPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSLPVNDRILREVATLSRLQHLHVVR 450
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS---------ADVTGQENKLESTYL 469
YYQAWFETGV GD+ W T ASST S ASS AD+ GQ+ KL+STYL
Sbjct: 451 YYQAWFETGVVGSFGDTSWDYSTAASSTISYHGASSTISYHGASSADI-GQDVKLDSTYL 509
Query: 470 YIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
YIQMEYCPRTLRQVFESY HFDKEL WH FRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR
Sbjct: 510 YIQMEYCPRTLRQVFESYKHFDKELVWHQFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 569
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
NDIKIGDFGLAKFLKLEQLD DA PTDT GVS DGTGQVGTYFYTAPEIEQGWPKIDEK
Sbjct: 570 NDIKIGDFGLAKFLKLEQLDHDATLPTDTSGVSADGTGQVGTYFYTAPEIEQGWPKIDEK 629
Query: 590 ADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649
DMYSLG+VFFELWHPF TAMER I+LSDLKQKGELP SWVA+F EQ SLLR+LMSPSPS
Sbjct: 630 VDMYSLGVVFFELWHPFGTAMERHIILSDLKQKGELPSSWVAQFPEQASLLRQLMSPSPS 689
Query: 650 DRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK---HHA 706
DRPSAT+LL++A PP+ME ELLD ILR M +SED S+YDKVV+SIFDEE L MK H
Sbjct: 690 DRPSATDLLKNAFPPRMESELLDKILRTMQTSEDRSVYDKVVNSIFDEEILSMKSHHQHV 749
Query: 707 GTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNT 766
G L + D++S IQY+DLDTELRDYVV+ +EMF++HCAKHLEI P+ LL DCPQF R T
Sbjct: 750 GLLGMGGDDSSCIQYADLDTELRDYVVEAAREMFKRHCAKHLEIIPVRLLDDCPQFSRKT 809
Query: 767 VKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFD 826
VKLLTHGGDLLEL HELRLPF+ W I+NQK SFKRYE+SSVYRRAIGHSPPNRYLQGDFD
Sbjct: 810 VKLLTHGGDLLELCHELRLPFVSWLIANQKFSFKRYEVSSVYRRAIGHSPPNRYLQGDFD 869
Query: 827 IIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAEL 886
IIGGASALTEAEV+KVTMDIVTRFF ++SCDIHLNHGDLL+AIWSW GIK EHR+KVAEL
Sbjct: 870 IIGGASALTEAEVIKVTMDIVTRFFLSDSCDIHLNHGDLLDAIWSWVGIKPEHRQKVAEL 929
Query: 887 LAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGA 946
L+MMGSLRPQSSE KSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA DQALPRLRGA
Sbjct: 930 LSMMGSLRPQSSERKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAVDQALPRLRGA 989
Query: 947 LPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPAT 1001
LPAD PTRKALDEL YL++W+IE ++YI+ALMPP E+YHR LFFQ YP
Sbjct: 990 LPADSPTRKALDELSDLVIYLKVWKIEHHVYINALMPPTENYHRGLFFQFL-----YP-- 1042
Query: 1002 LVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRN 1061
+ +T+PP VG SLALETIIQH PVDF+P RN
Sbjct: 1043 ---------------------------FVQKTHPPGAVGTSLALETIIQHSPVDFRPTRN 1075
Query: 1062 EAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLV 1121
E T++LVCSRGGGGLLVERM LVAELWE NIKA+FVP+ DPSLTEQYEYASEHDI+CLV
Sbjct: 1076 ETSTNILVCSRGGGGLLVERMGLVAELWEANIKAEFVPISDPSLTEQYEYASEHDIRCLV 1135
Query: 1122 ILTDTGAQKG 1131
I+TD G G
Sbjct: 1136 IITDAGESNG 1145
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356544520|ref|XP_003540698.1| PREDICTED: probable serine/threonine-protein kinase GCN2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 1648 bits (4267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 831/1176 (70%), Positives = 946/1176 (80%), Gaps = 37/1176 (3%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
MGYEDLDVSA+L VRCLPGYP+KCPKLQITPEKGL+++DA LL LLQDQA NAREGRV
Sbjct: 76 MGYEDLDVSAVLAVRCLPGYPFKCPKLQITPEKGLSEADAKKLLSLLQDQATLNAREGRV 135
Query: 61 MIFNLVEAAQEFLSEIVPLGQSNES-VPGLVTESSSQSFEGSAVSASKSCSSKVPFVYGF 119
MI+NLVEAAQEFLS I P+ ++N+S + + ES+ + F S +K S FVYGF
Sbjct: 136 MIYNLVEAAQEFLSGIEPIAKTNDSKLLHSMVESNEELFPKDMTSVNKKGS----FVYGF 191
Query: 120 IDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGT 179
IDLFSGCGE+W W G+DE S+ D S + + +K D PL++ +
Sbjct: 192 IDLFSGCGETWSWSFGMDETAVKSSSLSPSKLDAS--KPLEKKSDSKETPLIMQE----- 244
Query: 180 ALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGIKGENRDSLLQDHGSNNDGGD 239
+P AKLDTV E +ED N S+S T SS S +E++V N +GE ++ ++ + ++ G
Sbjct: 245 --LP-AKLDTVGEVSEDSNNSLSLTSSSRSLVEDFVGNKNEGEKEYFIVDEYTTEHNEGI 301
Query: 240 TEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGIF 299
E + ES S SL Q SQ +EKDLI+VH+LRL C S G+ D LPQ+ TEL NLGI
Sbjct: 302 NESESSESLSSESLPHHQPSQTVEKDLIMVHMLRLVCASKGTFADCLPQVVTELCNLGII 361
Query: 300 SERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEE 359
S+ RD+AS+P S FNKTFN+VF + + SSR+SQFWKP D G N SRYLNDFEE
Sbjct: 362 SDSARDMASEPPSIFNKTFNRVFQKHLASSRISQFWKP--DIGGSNTVPHGSRYLNDFEE 419
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 419
L+PLGHGGFGHVVLCKNKLDGR YAVKKIRLKDKS+P DRILREVATLSRLQHQHVVRY
Sbjct: 420 LRPLGHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSMP--DRILREVATLSRLQHQHVVRY 477
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 479
YQAWFETGV+D GDS WGS T SSTFS +AA+S D G EN+LESTYLYIQMEYCPRT
Sbjct: 478 YQAWFETGVSDSYGDSTWGSKTTVSSTFSYKAATSNDALGHENQLESTYLYIQMEYCPRT 537
Query: 480 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 539
LRQVFESY+HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL
Sbjct: 538 LRQVFESYNHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 597
Query: 540 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 599
AKFLKLEQLDQD P D GVS+DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG+VF
Sbjct: 598 AKFLKLEQLDQDLGHPADATGVSIDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVF 657
Query: 600 FELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
FELWHPF T MER ++LSDLKQK E+P +WV +F EQESLLR+LMSP+PSDRPSATELLQ
Sbjct: 658 FELWHPFGTGMERHVILSDLKQKREVPHTWVVEFPEQESLLRQLMSPAPSDRPSATELLQ 717
Query: 660 DALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSI 719
+A P +ME ELLD+ILR M SEDTSIYDKV+++IFDEE L KH R N+SSI
Sbjct: 718 NAFPQRMESELLDDILRTMQKSEDTSIYDKVLNAIFDEEMLSTKH-------IRQNSSSI 770
Query: 720 QYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLEL 779
QY+D +TE+RDYVV +E+FRQHCAKHLEI M LL DCPQF RN VKLLTHGGD+LEL
Sbjct: 771 QYTDFETEVRDYVVDANREIFRQHCAKHLEIPTMRLLDDCPQFNRNAVKLLTHGGDMLEL 830
Query: 780 SHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEV 839
HELRLPF+ W ISNQKSSFKRYEIS V+RRAIGHS PN YLQGDFDIIGG SALTEAEV
Sbjct: 831 CHELRLPFVNWIISNQKSSFKRYEISCVFRRAIGHSSPNHYLQGDFDIIGGTSALTEAEV 890
Query: 840 LKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSE 899
+KVT DIVT FFH +SCDIHLNHGDLL+AIWSW G+K EHR KVAELL+MMGSLRPQSSE
Sbjct: 891 IKVTRDIVTCFFHEDSCDIHLNHGDLLDAIWSWIGVKVEHRLKVAELLSMMGSLRPQSSE 950
Query: 900 WKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDE 959
KSKWVVIRRQLLQELNLAEA+VNRLQTVGLRFCG+ADQALPRLRGALP+DK KALDE
Sbjct: 951 RKSKWVVIRRQLLQELNLAEAMVNRLQTVGLRFCGSADQALPRLRGALPSDKRAFKALDE 1010
Query: 960 L-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014
L LRIWRI+KNIYIDALMPP ESYHR+LFFQV+ KE P +L EG LLAVGGRY
Sbjct: 1011 LSELVSLLRIWRIDKNIYIDALMPPTESYHRDLFFQVYLRKENSPGSLSEGALLAVGGRY 1070
Query: 1015 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGG 1074
DYL H++W +Y G NPP+GVG SLALETIIQ+ PVDFKP RNEA ++LVCSRGG
Sbjct: 1071 DYLFHQLWSSDYKG-----NPPTGVGTSLALETIIQNCPVDFKPNRNEASINILVCSRGG 1125
Query: 1075 GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTG-AQKGLV 1133
GGLLVERMELVAELWEEN KA+FVP PDPSLTEQYEYA+EH IKCLVI+TDT + G V
Sbjct: 1126 GGLLVERMELVAELWEENFKAEFVPTPDPSLTEQYEYANEHGIKCLVIITDTDFSLTGSV 1185
Query: 1134 KVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLW 1169
KVRHL+ K+EK V++++LV+FL DA+A+QFRNPS+W
Sbjct: 1186 KVRHLEHKREKNVEKKNLVKFLSDAMATQFRNPSIW 1221
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30694992|ref|NP_191500.2| non-specific serine/threonine protein kinase [Arabidopsis thaliana] gi|68052253|sp|Q9LX30.2|GCN2_ARATH RecName: Full=Probable serine/threonine-protein kinase GCN2 gi|24940154|emb|CAD30860.1| GCN2 homologue [Arabidopsis thaliana] gi|332646397|gb|AEE79918.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1641 bits (4249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 817/1181 (69%), Positives = 933/1181 (79%), Gaps = 23/1181 (1%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
MGYED D+SA+L+VRCLPGYPYKCPKLQITPE+GLT +DA+ LL LL+DQANSNAREGRV
Sbjct: 73 MGYEDTDISAMLIVRCLPGYPYKCPKLQITPEQGLTTADAEKLLSLLEDQANSNAREGRV 132
Query: 61 MIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASKSCSSKVPFVYGF 119
MIFNLVEAAQEFLSEI+P ESVP L S+Q E +S +KSCS PFVYGF
Sbjct: 133 MIFNLVEAAQEFLSEIIPESHDEESVPCLTAHRSTQFIEQPMLSNIAKSCSGG-PFVYGF 191
Query: 120 IDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGT 179
IDLFSG ++ +W L DENRG+V SV SH D S ++ +K DKN+K +
Sbjct: 192 IDLFSGLEDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHQKPDKNLKRFEDHAKEEVA 249
Query: 180 ALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDSLLQDHGSNNDGG 238
P AKL+TV+EEN DD S S ++ + VE+G+ + E ++S LQD + +D
Sbjct: 250 LPAPIAKLNTVQEENVDDTSISSFDSSKST---DDVESGLFQNEKKESNLQDDTAEDDST 306
Query: 239 DTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGI 298
++E + L S+S SL QDQ Q +KDL++VHLLR+AC S G L DALPQI EL+ LGI
Sbjct: 307 NSESESLGSWSSDSLAQDQVPQISKKDLLMVHLLRVACTSRGPLADALPQITDELHELGI 366
Query: 299 FSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFE 358
SE DLASK S FN+TF F+Q M S+ V QFW+P DS PN SLPSSRYLNDFE
Sbjct: 367 LSEEVLDLASKSSPDFNRTFEHAFNQNMASTSVPQFWEPPSDSCEPNASLPSSRYLNDFE 426
Query: 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
EL+PLG GGFGHVVLCKNKLDGR YAVKKIRLKDK +PVN RI+REVATLSRLQHQHVVR
Sbjct: 427 ELKPLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKEIPVNSRIVREVATLSRLQHQHVVR 486
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
YYQAWFETGV D + WGS T SS FS A S ++ Q+N LESTYLYIQMEYCPR
Sbjct: 487 YYQAWFETGVVDPFAGANWGSKTAGSSMFSYSGAVSTEIPEQDNNLESTYLYIQMEYCPR 546
Query: 479 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
TLRQVFESY+HFDK+ AWHL RQIVEGLAHIHGQGIIHRD TPNNIFFDARNDIKIGDFG
Sbjct: 547 TLRQVFESYNHFDKDFAWHLIRQIVEGLAHIHGQGIIHRDFTPNNIFFDARNDIKIGDFG 606
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598
LAKFLKLEQLDQD F TD G VD TGQ GTYFYTAPEIEQ WPKIDEKADMYSLG+V
Sbjct: 607 LAKFLKLEQLDQDGGFSTDVAGSGVDSTGQAGTYFYTAPEIEQDWPKIDEKADMYSLGVV 666
Query: 599 FFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658
FFELWHPF TAMER ++L++LK KGELP WV +F EQ SLLRRLMSPSPSDRPSATELL
Sbjct: 667 FFELWHPFGTAMERHVILTNLKLKGELPLKWVNEFPEQASLLRRLMSPSPSDRPSATELL 726
Query: 659 QDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK-HHAGTLRLNRDNTS 717
+ A PP+ME ELLDNILR+M +SED+S+YD+VVS IFDEE L+MK H + RL D+ S
Sbjct: 727 KHAFPPRMESELLDNILRIMQTSEDSSVYDRVVSVIFDEEVLEMKSHQSSRSRLCADD-S 785
Query: 718 SIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLL 777
IQY++++TELRDYVV++TKE+FRQHCAKHLE+ PM LL DCPQF R TVKLLT+GGD+L
Sbjct: 786 YIQYTEINTELRDYVVEITKEVFRQHCAKHLEVIPMRLLSDCPQFSRKTVKLLTNGGDML 845
Query: 778 ELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEA 837
EL +ELRLPF+ W NQKSSFKRYEIS VYRRAIGHSPPN LQ DFDI+GG +LTEA
Sbjct: 846 ELCYELRLPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTLSLTEA 905
Query: 838 EVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQS 897
EVLKV +DI T FH SCDIHLNHGDLL+AIWSWAGIKAEHR KVAELL+MMGSLRPQS
Sbjct: 906 EVLKVIVDITTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAEHRRKVAELLSMMGSLRPQS 965
Query: 898 SEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKAL 957
SE K KWV IRRQLLQEL L EAVVNRLQTV RFCG ADQALPRLRGAL AD+PTRKAL
Sbjct: 966 SERKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRADRPTRKAL 1025
Query: 958 DEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1012
DEL YLR+WRIE++++ID LMPP ESYHRNLFFQVF KE T +G LLAVGG
Sbjct: 1026 DELSNLLTYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSNDGVLLAVGG 1085
Query: 1013 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSR 1072
RYD+L+ + DRE+ + N P VG SLALETI QH P+D +P+RNE TSVLVCSR
Sbjct: 1086 RYDWLVQEVCDREH-----KMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLVCSR 1140
Query: 1073 GGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGA---Q 1129
GGGGLLV+RMELVAELWE++IKA+FVP PDPSLTEQYEYA+EH+IKCLVI+T++G Q
Sbjct: 1141 GGGGLLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGVAQNQ 1200
Query: 1130 KGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1170
VKVRHL++KKEK V RE LV+FLLDA+A QFRNPS+WS
Sbjct: 1201 IEFVKVRHLELKKEKVVGREELVKFLLDAMAVQFRNPSVWS 1241
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334186129|ref|NP_001190135.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] gi|332646398|gb|AEE79919.1| non-specific serine/threonine protein kinase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1639 bits (4245), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 817/1181 (69%), Positives = 933/1181 (79%), Gaps = 23/1181 (1%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
MGYED D+SA+L+VRCLPGYPYKCPKLQITPE+GLT +DA+ LL LL+DQANSNAREGRV
Sbjct: 97 MGYEDTDISAMLIVRCLPGYPYKCPKLQITPEQGLTTADAEKLLSLLEDQANSNAREGRV 156
Query: 61 MIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASKSCSSKVPFVYGF 119
MIFNLVEAAQEFLSEI+P ESVP L S+Q E +S +KSCS PFVYGF
Sbjct: 157 MIFNLVEAAQEFLSEIIPESHDEESVPCLTAHRSTQFIEQPMLSNIAKSCSGG-PFVYGF 215
Query: 120 IDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGT 179
IDLFSG ++ +W L DENRG+V SV SH D S ++ +K DKN+K +
Sbjct: 216 IDLFSGLEDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHQKPDKNLKRFEDHAKEEVA 273
Query: 180 ALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDSLLQDHGSNNDGG 238
P AKL+TV+EEN DD S S ++ + VE+G+ + E ++S LQD + +D
Sbjct: 274 LPAPIAKLNTVQEENVDDTSISSFDSSKST---DDVESGLFQNEKKESNLQDDTAEDDST 330
Query: 239 DTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGI 298
++E + L S+S SL QDQ Q +KDL++VHLLR+AC S G L DALPQI EL+ LGI
Sbjct: 331 NSESESLGSWSSDSLAQDQVPQISKKDLLMVHLLRVACTSRGPLADALPQITDELHELGI 390
Query: 299 FSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFE 358
SE DLASK S FN+TF F+Q M S+ V QFW+P DS PN SLPSSRYLNDFE
Sbjct: 391 LSEEVLDLASKSSPDFNRTFEHAFNQNMASTSVPQFWEPPSDSCEPNASLPSSRYLNDFE 450
Query: 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
EL+PLG GGFGHVVLCKNKLDGR YAVKKIRLKDK +PVN RI+REVATLSRLQHQHVVR
Sbjct: 451 ELKPLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKEIPVNSRIVREVATLSRLQHQHVVR 510
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
YYQAWFETGV D + WGS T SS FS A S ++ Q+N LESTYLYIQMEYCPR
Sbjct: 511 YYQAWFETGVVDPFAGANWGSKTAGSSMFSYSGAVSTEIPEQDNNLESTYLYIQMEYCPR 570
Query: 479 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
TLRQVFESY+HFDK+ AWHL RQIVEGLAHIHGQGIIHRD TPNNIFFDARNDIKIGDFG
Sbjct: 571 TLRQVFESYNHFDKDFAWHLIRQIVEGLAHIHGQGIIHRDFTPNNIFFDARNDIKIGDFG 630
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598
LAKFLKLEQLDQD F TD G VD TGQ GTYFYTAPEIEQ WPKIDEKADMYSLG+V
Sbjct: 631 LAKFLKLEQLDQDGGFSTDVAGSGVDSTGQAGTYFYTAPEIEQDWPKIDEKADMYSLGVV 690
Query: 599 FFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658
FFELWHPF TAMER ++L++LK KGELP WV +F EQ SLLRRLMSPSPSDRPSATELL
Sbjct: 691 FFELWHPFGTAMERHVILTNLKLKGELPLKWVNEFPEQASLLRRLMSPSPSDRPSATELL 750
Query: 659 QDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK-HHAGTLRLNRDNTS 717
+ A PP+ME ELLDNILR+M +SED+S+YD+VVS IFDEE L+MK H + RL D+ S
Sbjct: 751 KHAFPPRMESELLDNILRIMQTSEDSSVYDRVVSVIFDEEVLEMKSHQSSRSRLCADD-S 809
Query: 718 SIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLL 777
IQY++++TELRDYVV++TKE+FRQHCAKHLE+ PM LL DCPQF R TVKLLT+GGD+L
Sbjct: 810 YIQYTEINTELRDYVVEITKEVFRQHCAKHLEVIPMRLLSDCPQFSRKTVKLLTNGGDML 869
Query: 778 ELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEA 837
EL +ELRLPF+ W NQKSSFKRYEIS VYRRAIGHSPPN LQ DFDI+GG +LTEA
Sbjct: 870 ELCYELRLPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTLSLTEA 929
Query: 838 EVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQS 897
EVLKV +DI T FH SCDIHLNHGDLL+AIWSWAGIKAEHR KVAELL+MMGSLRPQS
Sbjct: 930 EVLKVIVDITTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAEHRRKVAELLSMMGSLRPQS 989
Query: 898 SEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKAL 957
SE K KWV IRRQLLQEL L EAVVNRLQTV RFCG ADQALPRLRGAL AD+PTRKAL
Sbjct: 990 SERKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRADRPTRKAL 1049
Query: 958 DEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1012
DEL YLR+WRIE++++ID LMPP ESYHRNLFFQVF KE T +G LLAVGG
Sbjct: 1050 DELSNLLTYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSNDGVLLAVGG 1109
Query: 1013 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSR 1072
RYD+L+ + DRE+ + N P VG SLALETI QH P+D +P+RNE TSVLVCSR
Sbjct: 1110 RYDWLVQEVCDREH-----KMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLVCSR 1164
Query: 1073 GGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGA---Q 1129
GGGGLLV+RMELVAELWE++IKA+FVP PDPSLTEQYEYA+EH+IKCLVI+T++G Q
Sbjct: 1165 GGGGLLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIITESGVAQNQ 1224
Query: 1130 KGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1170
VKVRHL++KKEK V RE LV+FLLDA+A QFRNPS+WS
Sbjct: 1225 IEFVKVRHLELKKEKVVGREELVKFLLDAMAVQFRNPSVWS 1265
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297817238|ref|XP_002876502.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] gi|297322340|gb|EFH52761.1| kinase family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1638 bits (4242), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 819/1182 (69%), Positives = 938/1182 (79%), Gaps = 25/1182 (2%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
MGYED+D+SA+L+VRCLPGYPYKCPKLQITPE+GLT +DA+ LL LL+DQANSNAREGRV
Sbjct: 74 MGYEDIDISAMLVVRCLPGYPYKCPKLQITPEQGLTTADAEKLLSLLEDQANSNAREGRV 133
Query: 61 MIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASKSCSSKVPFVYGF 119
MIFNLVEAAQEFLSEI+P E VP L S+Q E +S +KSC+ PFVYGF
Sbjct: 134 MIFNLVEAAQEFLSEIIPESHDEEPVPCLTAHRSAQFIEQPMLSNKAKSCTGG-PFVYGF 192
Query: 120 IDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGT 179
IDLFSG ++ +W L DENRG+V SV SH D S ++ K DKN+K + A +
Sbjct: 193 IDLFSGLEDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHEKSDKNLKRF-VDHAKEEI 249
Query: 180 AL-IPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDSLLQDHGSNNDG 237
AL P+AKL+TV+E+N DD S S ++ + VE+G+ + E ++S LQD + +D
Sbjct: 250 ALPAPTAKLNTVQEDNVDDTSISSFDSSKST---DDVESGLFQNEKKESNLQDDTAEDDS 306
Query: 238 GDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLG 297
++E + L S+S SL QDQ Q +KDL++VHLLR+AC S G L DALPQI EL+ LG
Sbjct: 307 SNSESESLGSWSSDSLSQDQVPQISKKDLLMVHLLRVACTSRGPLADALPQITDELHQLG 366
Query: 298 IFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDF 357
I SE DLASK S FN+TF F+Q MVS+ V QFW+P DSG PN SLPSSRYLNDF
Sbjct: 367 ILSEEALDLASKSSPDFNRTFEHAFNQNMVSTSVPQFWEPPSDSGEPNASLPSSRYLNDF 426
Query: 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417
EEL+PLG GGFGHVVLCKNKLDGR YAVKKIRLK+K +PVN RI+REVATLSRLQHQHVV
Sbjct: 427 EELKPLGQGGFGHVVLCKNKLDGRQYAVKKIRLKEKEIPVNSRIVREVATLSRLQHQHVV 486
Query: 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 477
RYYQAWFETGV D + WGS T SS FS A S ++ Q+N LESTYLYIQMEYCP
Sbjct: 487 RYYQAWFETGVVDPFAGANWGSKTAGSSMFSYSGAVSTEIPEQDNNLESTYLYIQMEYCP 546
Query: 478 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 537
RTLRQVFESY+HFDK+ AWHL RQIVEGLAHIHGQGIIHRD TPNNIFFDARNDIKIGDF
Sbjct: 547 RTLRQVFESYNHFDKDFAWHLIRQIVEGLAHIHGQGIIHRDFTPNNIFFDARNDIKIGDF 606
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597
GLAKFLKLEQLDQD F TD G VD TGQ GTYFYTAPEIEQ WPKIDEKADMYSLG+
Sbjct: 607 GLAKFLKLEQLDQDGGFSTDVAGSGVDSTGQAGTYFYTAPEIEQDWPKIDEKADMYSLGV 666
Query: 598 VFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657
VFFELWHPF TAMER ++L+DLK KGELP WV +F EQ SLLRRLMSPSPSDRPSATEL
Sbjct: 667 VFFELWHPFGTAMERHVILTDLKLKGELPLKWVNEFPEQASLLRRLMSPSPSDRPSATEL 726
Query: 658 LQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK-HHAGTLRLNRDNT 716
L+ A PP+ME ELLDNILR+M +SED+S+YD+VVS IFDEE L+MK H + + RL D+
Sbjct: 727 LKHAFPPRMESELLDNILRIMQTSEDSSVYDRVVSVIFDEEVLEMKSHQSSSSRLCADD- 785
Query: 717 SSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDL 776
S IQY++++TELRDYVV +TKE+FRQHCAKHLE+ PM LL DCPQF R TVKLLT+GGD+
Sbjct: 786 SYIQYTEINTELRDYVVDITKEVFRQHCAKHLEVIPMRLLSDCPQFSRKTVKLLTNGGDM 845
Query: 777 LELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTE 836
LEL +ELRLPF+ W NQKSSFKRYEIS VYRRAIGHSPPN LQ DFDI+GG +LTE
Sbjct: 846 LELCYELRLPFVNWISVNQKSSFKRYEISHVYRRAIGHSPPNPCLQADFDIVGGTPSLTE 905
Query: 837 AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQ 896
AEVLKV +DI T FH SCDIHLNHGDLL+AIWSWAGIKAEHR KVAELL+MMGSLRPQ
Sbjct: 906 AEVLKVIVDITTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAEHRRKVAELLSMMGSLRPQ 965
Query: 897 SSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKA 956
SSE K KWV IRRQLLQEL L EAVVNRLQTV RFCG ADQALPRLRGAL AD+PTRKA
Sbjct: 966 SSERKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQALPRLRGALRADRPTRKA 1025
Query: 957 LDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1011
LDEL YLR+WRIE++++ID LMPP ESYHRNLFFQVF KE T +G LLAVG
Sbjct: 1026 LDELSNLLTYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFLTKENSSGTSSDGVLLAVG 1085
Query: 1012 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCS 1071
GRYD+L+ + DREY + N P VG SLALETI QH P+D +P+RNE TSVLVCS
Sbjct: 1086 GRYDFLVQEVCDREY-----KMNLPGAVGVSLALETIFQHLPMDLRPIRNEVSTSVLVCS 1140
Query: 1072 RGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGA--- 1128
RGGGGLLV+RMELVAELWE++IKA+FVP PDPSLTEQYEYA+EH+IKCLVI+ ++G
Sbjct: 1141 RGGGGLLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYANEHEIKCLVIIAESGVAQN 1200
Query: 1129 QKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1170
Q VKVRHL++KKEK V RE LV+FLLDA+A QFRNPS+WS
Sbjct: 1201 QIEFVKVRHLELKKEKVVGREELVKFLLDAMAVQFRNPSVWS 1242
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449446446|ref|XP_004140982.1| PREDICTED: probable serine/threonine-protein kinase GCN2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1554 bits (4024), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 794/1250 (63%), Positives = 923/1250 (73%), Gaps = 105/1250 (8%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
MG+ED DVSAL V+ LPGYPYKCPKL ITPE+GL K D + LL LL +QAN NAR+GR+
Sbjct: 74 MGFEDRDVSALFSVKYLPGYPYKCPKLLITPERGLAKGDTEKLLSLLHEQANYNARDGRI 133
Query: 61 MIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVSASKSCSSKVPFVYGFI 120
MIFNL EAAQEFLSEIV +G+SNES T S+SQ S K K P+VYG+I
Sbjct: 134 MIFNLAEAAQEFLSEIVTIGESNESAVRSHTASTSQLLPEKTTSNEK----KGPYVYGYI 189
Query: 121 DLFSGCGESWHWGLGIDE--NRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQG 178
DLFSG GE W W +DE N P V G+ V +K+DK L ++ +G
Sbjct: 190 DLFSGSGELWSWSFDMDEKLNSLAQPLVADSLKLGA---VQEKKLDKVQNLLARQNSKRG 246
Query: 179 TALIPSAKLDTVKEE---------------------NEDDNRS-----ISTTDSSTSPM- 211
L PS+ L T++EE NED N S TDS T+P
Sbjct: 247 ELLSPSSNLGTLEEETEGDSQSKSSSNSRRSLIVQRNEDGNEGEMQDRTSATDSLTTPAI 306
Query: 212 -----------------------------EEW-------------VENGIKGENRDSLLQ 229
++W +E+ + DS+L
Sbjct: 307 DSAAFCAKSPSHDSERHNGKPIPICEHCKKQWHTRSSVGSYMVVSLEHEVLIPGLDSILT 366
Query: 230 DHGSNNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQI 289
+ D +E + E +SFAS +Q SQ ++D+++VHLL LAC G L DALP++
Sbjct: 367 SDVAEGDDHGSESEASE-WSFASFSNEQESQTTDRDIMMVHLLHLACAPKGPLADALPKL 425
Query: 290 ATELYNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLP 349
A+EL NLG+ S+ DLASKPSS F+K F F ++M ++ SQFW + D G S
Sbjct: 426 ASELCNLGVLSKAALDLASKPSSTFHKKFKTAFQEQMNATSFSQFW--TSDFGGSASSQL 483
Query: 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 409
SSRYLNDFEEL+PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK LPVNDRILREVATLS
Sbjct: 484 SSRYLNDFEELKPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKILPVNDRILREVATLS 543
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
RLQHQHVVRYYQAW+E+GV+D G++ WGS T SSTFS + AS+ D ENK ESTYL
Sbjct: 544 RLQHQHVVRYYQAWYESGVSDSYGEAAWGSMTPLSSTFSYKGASATDAE-HENKTESTYL 602
Query: 470 YIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
YIQMEYCPRTLRQ FESY FDKELAWHLF QIVEGLAHIHGQGIIHRDLTP+NIFFDAR
Sbjct: 603 YIQMEYCPRTLRQDFESYTRFDKELAWHLFHQIVEGLAHIHGQGIIHRDLTPSNIFFDAR 662
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
NDIKIGDFGLAKFLKLEQLDQD P DT GVS+DGTGQVGTYFYTAPEIEQGWPKIDEK
Sbjct: 663 NDIKIGDFGLAKFLKLEQLDQDVGVPLDTTGVSIDGTGQVGTYFYTAPEIEQGWPKIDEK 722
Query: 590 ADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649
ADMYSLGIVFFELWHPF+TAMER +VLSDLKQKGELP WVA+FSEQ SLLRRLMS SPS
Sbjct: 723 ADMYSLGIVFFELWHPFATAMERHLVLSDLKQKGELPTVWVAEFSEQASLLRRLMSQSPS 782
Query: 650 DRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMK---HHA 706
+RPSA+ELLQ A PP+MEY+LLDNILR M SSED+SIYD+VV++IFDEE+L MK H
Sbjct: 783 ERPSASELLQHAFPPRMEYQLLDNILRTMKSSEDSSIYDRVVNAIFDEESLVMKDDRHDC 842
Query: 707 GTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNT 766
G T++IQY+DL TE+RD+V+ T+EMFR HCAKHLE+ MYLL Q RNT
Sbjct: 843 G--------TATIQYTDLGTEVRDHVIDATREMFRLHCAKHLEMSSMYLLDSSTQINRNT 894
Query: 767 VKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFD 826
VKLL+HGGD+LEL HELRLPF+ W + +QKSSFKRY+IS VYRRAIGHSPPNRYLQGDFD
Sbjct: 895 VKLLSHGGDILELCHELRLPFLNWLVFSQKSSFKRYDISYVYRRAIGHSPPNRYLQGDFD 954
Query: 827 IIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAEL 886
IIGG SALTEAEV+KVT+DI++ FF+++SCDIHLNHGDLL AIWSW G+KAEHR KVAEL
Sbjct: 955 IIGGTSALTEAEVIKVTVDIISYFFNSDSCDIHLNHGDLLNAIWSWVGVKAEHRHKVAEL 1014
Query: 887 LAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGA 946
L+MM SLRPQSSE KSKWVVIRRQLLQEL LA+AVVNRLQTV RFCGA DQALPRLRGA
Sbjct: 1015 LSMMVSLRPQSSERKSKWVVIRRQLLQELKLAQAVVNRLQTVVFRFCGAVDQALPRLRGA 1074
Query: 947 LPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPAT 1001
LP DK KALDEL YLR+WR+E N+YIDALM P E YHR++FFQV+ KE P +
Sbjct: 1075 LPTDKSMHKALDELLNLFNYLRVWRLETNVYIDALMSPTEGYHRDIFFQVYLTKENNPGS 1134
Query: 1002 LVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRN 1061
EG LLA+GGRYDYLL +MW R Y +++PP GVG S+ALETIIQ +D KP+RN
Sbjct: 1135 HPEGALLAIGGRYDYLLQQMWSRSY-----KSSPPGGVGTSIALETIIQQSALDLKPIRN 1189
Query: 1062 EAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLV 1121
E TSVL+CSR GGGLL+ERMELV ELWEE IKAQ VP PDPSLTEQYEYA+EHDIKCLV
Sbjct: 1190 EGSTSVLICSR-GGGLLLERMELVVELWEEKIKAQLVPTPDPSLTEQYEYANEHDIKCLV 1248
Query: 1122 ILTDTG-AQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1170
I+TD+G + G VKVRHL++KKEK+V+R +V+FL +A+A+QF+NP +W+
Sbjct: 1249 IITDSGVSNTGSVKVRHLELKKEKKVERTYIVKFLQEAMANQFKNPLIWN 1298
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|7801691|emb|CAB91611.1| protein kinase like [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 1551 bits (4015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 791/1200 (65%), Positives = 909/1200 (75%), Gaps = 44/1200 (3%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
MGYED D+SA+L+VRCLPGYPYKCPKLQITPE+G +++L +Q S +GRV
Sbjct: 86 MGYEDTDISAMLIVRCLPGYPYKCPKLQITPEQGHGNIFYNDILYGIQ--KCSMLTQGRV 143
Query: 61 MIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSAVS-ASKSCSSKVPFVYGF 119
MIFNLVEAAQEFLSEI+P ESVP L S+Q E +S +KSCS PFVYGF
Sbjct: 144 MIFNLVEAAQEFLSEIIPESHDEESVPCLTAHRSTQFIEQPMLSNIAKSCSGG-PFVYGF 202
Query: 120 IDLFSGCGESWHWGLGIDENRGVVPSVPSHASDGSNYEVMWRKIDKNVKPLMIPDANQGT 179
IDLFSG ++ +W L DENRG+V SV SH D S ++ +K DKN+K +
Sbjct: 203 IDLFSGLEDARNWSLTPDENRGIVSSVQSHPLDTSR--ILHQKPDKNLKRFEDHAKEEVA 260
Query: 180 ALIPSAKLDTVKEENEDDNRSISTTDSSTSPMEEWVENGI-KGENRDSLLQDHGSNNDGG 238
P AKL+TV+EEN DD S S ++ + VE+G+ + E ++S LQD + +D
Sbjct: 261 LPAPIAKLNTVQEENVDDTSISSFDSSKST---DDVESGLFQNEKKESNLQDDTAEDDST 317
Query: 239 DTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGI 298
++E + L S+S SL QDQ Q +KDL++VHLLR+AC S G L DALPQI EL+ LGI
Sbjct: 318 NSESESLGSWSSDSLAQDQVPQISKKDLLMVHLLRVACTSRGPLADALPQITDELHELGI 377
Query: 299 FSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFE 358
SE DLASK S FN+TF F+Q M S+ V QFW+P DS PN SLPSSRYLNDFE
Sbjct: 378 LSEEVLDLASKSSPDFNRTFEHAFNQNMASTSVPQFWEPPSDSCEPNASLPSSRYLNDFE 437
Query: 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI----------------- 401
EL+PLG GGFGHVVLCKNKLDGR YAVKKIRLKDK +PVN RI
Sbjct: 438 ELKPLGQGGFGHVVLCKNKLDGRQYAVKKIRLKDKEIPVNSRIIGLEYNAKSVFTCARYE 497
Query: 402 -LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 460
LREVATLSRLQHQHVVRYYQAWFETGV D + WGS T SS FS A S ++ Q
Sbjct: 498 VLREVATLSRLQHQHVVRYYQAWFETGVVDPFAGANWGSKTAGSSMFSYSGAVSTEIPEQ 557
Query: 461 ENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520
+N LESTYLYIQMEYCPRTLRQVFESY+HFDK+ AWHL RQIVEGLAHIHGQGIIHRD T
Sbjct: 558 DNNLESTYLYIQMEYCPRTLRQVFESYNHFDKDFAWHLIRQIVEGLAHIHGQGIIHRDFT 617
Query: 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580
PNNIFFDARNDIKIGDFGLAKFLKLEQLDQD F TD G VD TGQ GTYFYTAPEIE
Sbjct: 618 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDGGFSTDVAGSGVDSTGQAGTYFYTAPEIE 677
Query: 581 QGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 640
Q WPKIDEKADMYSLG+VFFELWHPF TAMER ++L++LK KGELP WV +F EQ SLL
Sbjct: 678 QDWPKIDEKADMYSLGVVFFELWHPFGTAMERHVILTNLKLKGELPLKWVNEFPEQASLL 737
Query: 641 RRLMSPSPSDRPSATELLQDALPPQMEYELLDN-ILRMMHSSEDTSIYDKVVSSIFDEET 699
RRLMSPSPSDRPSATELL+ A PP+ME ELLD+ +++ + +S IFDEE
Sbjct: 738 RRLMSPSPSDRPSATELLKHAFPPRMESELLDSEFFAVLYLCQLHMNVLGRLSVIFDEEV 797
Query: 700 LDMK-HHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD 758
L+MK H + RL D+ S IQY++++TELRDYVV++TKE+FRQHCAKHLE+ PM LL D
Sbjct: 798 LEMKSHQSSRSRLCADD-SYIQYTEINTELRDYVVEITKEVFRQHCAKHLEVIPMRLLSD 856
Query: 759 CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPN 818
CPQF R TVKLLT+GGD+LEL +ELRLPF+ W NQKSSFKRYEIS VYRRAIGHSPPN
Sbjct: 857 CPQFSRKTVKLLTNGGDMLELCYELRLPFVHWISVNQKSSFKRYEISHVYRRAIGHSPPN 916
Query: 819 RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAE 878
LQ DFDI+GG +LTEAEVLKV +DI T FH SCDIHLNHGDLL+AIWSWAGIKAE
Sbjct: 917 PCLQADFDIVGGTLSLTEAEVLKVIVDITTHIFHRGSCDIHLNHGDLLDAIWSWAGIKAE 976
Query: 879 HREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQ 938
HR KVAELL+MMGSLRPQSSE K KWV IRRQLLQEL L EAVVNRLQTV RFCG ADQ
Sbjct: 977 HRRKVAELLSMMGSLRPQSSERKLKWVFIRRQLLQELKLPEAVVNRLQTVASRFCGDADQ 1036
Query: 939 ALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFS 993
ALPRLRGAL AD+PTRKALDEL YLR+WRIE++++ID LMPP ESYHRNLFFQVF
Sbjct: 1037 ALPRLRGALRADRPTRKALDELSNLLTYLRVWRIEEHVHIDVLMPPTESYHRNLFFQVFL 1096
Query: 994 VKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1053
KE T +G LLAVGGRYD+L+ + DRE+ + N P VG SLALETI QH P
Sbjct: 1097 TKENSSGTSNDGVLLAVGGRYDWLVQEVCDREH-----KMNLPGAVGVSLALETIFQHLP 1151
Query: 1054 VDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYAS 1113
+D +P+RNE TSVLVCSRGGGGLLV+RMELVAELWE++IKA+FVP PDPSLTEQYEYA+
Sbjct: 1152 MDLRPIRNEVSTSVLVCSRGGGGLLVQRMELVAELWEKSIKAEFVPTPDPSLTEQYEYAN 1211
Query: 1114 EHDIKCLVILTDTGA---QKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSLWS 1170
EH+IKCLVI+T++G Q VKVRHL++KKEK V RE LV+FLLDA+A QFRNPS+WS
Sbjct: 1212 EHEIKCLVIITESGVAQNQIEFVKVRHLELKKEKVVGREELVKFLLDAMAVQFRNPSVWS 1271
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297743778|emb|CBI36661.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1303 bits (3372), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 631/798 (79%), Positives = 691/798 (86%), Gaps = 14/798 (1%)
Query: 364 GHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAW 423
GHGGFGHVVLCKNKLDGR YAVKKIRLKDKS PV DRILREVATLSRLQHQHVVRYYQAW
Sbjct: 30 GHGGFGHVVLCKNKLDGRQYAVKKIRLKDKSPPVYDRILREVATLSRLQHQHVVRYYQAW 89
Query: 424 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV 483
FETGV+ GD+ WGS T ASS+FS + ASSADV ENKLESTYLYIQMEYCPRTLRQ+
Sbjct: 90 FETGVSGSFGDTTWGSMTPASSSFSYKGASSADVNVHENKLESTYLYIQMEYCPRTLRQM 149
Query: 484 FESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543
FESY HFDKELAWHLFRQIVEGL HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL
Sbjct: 150 FESYSHFDKELAWHLFRQIVEGLVHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 209
Query: 544 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 603
KLEQLDQD P DT GVSVD TGQVGTYFYTAPEIEQGWPKIDEKADMYSLG+VFFELW
Sbjct: 210 KLEQLDQDPGVPPDTTGVSVDRTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGVVFFELW 269
Query: 604 HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663
HPF TAMER IVL+DLKQKGELP SWVA+F EQ SLL+ LMSPSPSDRP ATELLQ A P
Sbjct: 270 HPFGTAMERSIVLNDLKQKGELPSSWVAEFPEQASLLQHLMSPSPSDRPFATELLQHAFP 329
Query: 664 PQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKH--HAGTLRLNRDNTSSIQY 721
P+MEYELLDNILR M +SEDT +YDKVV++IFD+E L K+ H G LRL D+TSSIQY
Sbjct: 330 PRMEYELLDNILRTMQTSEDTGVYDKVVNAIFDKEMLSAKNLQHFGRLRLVGDDTSSIQY 389
Query: 722 SDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSH 781
+D DTELRD+V +VT+E+FR HCAK LE+ P+ LL DCPQ RNTVKLLTHGGD++EL H
Sbjct: 390 TDSDTELRDHVSEVTREVFRHHCAKRLEVVPIRLLDDCPQTIRNTVKLLTHGGDMIELCH 449
Query: 782 ELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLK 841
ELRLPF+ W I+NQKSSFKRYE+S VYRRAIGHS PNRYLQGDFD+IGGA+ALTEAEV+K
Sbjct: 450 ELRLPFVNWVITNQKSSFKRYEVSYVYRRAIGHSAPNRYLQGDFDMIGGATALTEAEVIK 509
Query: 842 VTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWK 901
V MDIVT FFH+ SC IHLNHGDLLEAIWSW GIKAEHR+KVAELL+MM SLRPQS E K
Sbjct: 510 VAMDIVTHFFHSNSCGIHLNHGDLLEAIWSWIGIKAEHRQKVAELLSMMSSLRPQSPERK 569
Query: 902 SKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL- 960
KWVVIRRQL QELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL
Sbjct: 570 LKWVVIRRQLQQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELA 629
Query: 961 ----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDY 1016
YLR+WRIEK+++IDALMPP ESYHR+LFFQ++ +KE P +L EG LLA+GGRYD
Sbjct: 630 DLFSYLRVWRIEKHVFIDALMPPTESYHRDLFFQIYLMKENNPGSLKEGVLLAIGGRYDQ 689
Query: 1017 LLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGG 1076
LL M +AS++NPP VG SLALET+IQH +D +P RNE G +VLVCSRGGGG
Sbjct: 690 LLREM------CFASKSNPPGAVGVSLALETVIQHSSMDIRPFRNEVGINVLVCSRGGGG 743
Query: 1077 LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQ-KGLVKV 1135
LL ERMELVA LWEENIKA+FVPV DPSLTEQYEYA+EHDIKCLVI+TDTG VKV
Sbjct: 744 LLEERMELVAGLWEENIKAEFVPVSDPSLTEQYEYANEHDIKCLVIITDTGVSPTDFVKV 803
Query: 1136 RHLDVKKEKEVQRESLVR 1153
RHL++KKEKEV+RE+LV+
Sbjct: 804 RHLELKKEKEVERENLVK 821
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|357164402|ref|XP_003580041.1| PREDICTED: probable serine/threonine-protein kinase GCN2-like [Brachypodium distachyon] | Back alignment and taxonomy information |
|---|
Score = 1186 bits (3068), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 634/1208 (52%), Positives = 813/1208 (67%), Gaps = 69/1208 (5%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
MG+ DL+VSA+L V C PGYP KCPKL+I PEK L+K DAD LL LL DQAN +REGRV
Sbjct: 70 MGFGDLNVSAILDVICFPGYPNKCPKLRIIPEKNLSKEDADRLLSLLVDQANIYSREGRV 129
Query: 61 MIFNLVEAAQEFLSEIVPLGQSNESVPGLVTESSSQSFEGSA-VSASKSCSSKVPFVYGF 119
MIF+LVEAAQEFLSEI P S + P L + + Q+ V + ++Y
Sbjct: 130 MIFDLVEAAQEFLSEIAPANDSASTDPHLGSSTIQQTTNADVKVGIDSGPCPGISYIYHL 189
Query: 120 IDLFSGCGESWHWGLGIDENRGVVPSVPSHASD-GSNYEVMWRKIDKNV----------- 167
DL+S + W + +GV P+ S + GS + R K V
Sbjct: 190 FDLYSQLSDDNSW-----QRQGVDPTTDSARKNVGSQVKSNVRSKRKTVDEKSRFSADKV 244
Query: 168 ---KPLMIPDANQGTAL--------IPSAKLDTVKEENEDDNRSISTTDS---STSPMEE 213
K + +A Q + +PS L V EE ++D +++ST+D S +P
Sbjct: 245 NAAKSSSLDNAEQQHVMKHSFTRDAVPS--LHVVAEETDNDRKTLSTSDGGGLSDTPERS 302
Query: 214 W-VENGIKGENRDSLLQDHGSNNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLL 272
+ V + + + D D + G ++ S+A D AS++ ++DLILVHLL
Sbjct: 303 FSVVHETEDSDADEAWNDEECGSASGSSQ-------SYAPDMFDDASRNKKRDLILVHLL 355
Query: 273 RLACQSTGSLTDALPQIATELYNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVS 332
RLAC S SL+ ALP I++EL N+G+ SE ++L S+ + F +TF+ VF Q+M+SS S
Sbjct: 356 RLACASKDSLSGALPVISSELCNIGVLSEWAKELISESPADFGETFDHVFGQQMISSECS 415
Query: 333 QFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD 392
FW+ S PN SRYLNDFEEL+ LG GGFG V LCKNKLDGR YAVKKIRL D
Sbjct: 416 LFWRADNSSSRPN-----SRYLNDFEELRSLGQGGFGRVALCKNKLDGRQYAVKKIRLND 470
Query: 393 KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 452
+S VN++ILREVATLSRLQHQHVVRYYQAW ET + GS T SS FS
Sbjct: 471 RSPQVNEKILREVATLSRLQHQHVVRYYQAWVETEYGHHHVLNTGGSRTAESSMFSYDDI 530
Query: 453 SSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHG 511
S +D G NK ESTYLYIQMEYCPRTLRQ E+Y FD + AWHLFRQIVEGLAH+H
Sbjct: 531 SLSDA-GAGNKQESTYLYIQMEYCPRTLRQDLETYSSSFDFDRAWHLFRQIVEGLAHVHS 589
Query: 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
QGIIHRDLTP+NIFFD RNDIKIGDFGLAKFLKLEQLD D PT+ GVS+DGTGQVGT
Sbjct: 590 QGIIHRDLTPSNIFFDVRNDIKIGDFGLAKFLKLEQLDNDQYLPTEAIGVSMDGTGQVGT 649
Query: 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVA 631
YFYTAPE+EQ WP+I+EK DMYS G++FFELWHPFSTAMER +VL+DLKQKG+ P SW A
Sbjct: 650 YFYTAPEVEQKWPQINEKVDMYSAGVIFFELWHPFSTAMERHLVLTDLKQKGDSPISWAA 709
Query: 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVV 691
+F Q +LLRRL+ PSPSDRPSA ELLQ+ LPP+ME E L+++LRM+ + EDT +YD+V+
Sbjct: 710 QFPGQSNLLRRLLCPSPSDRPSAVELLQNELPPRMEDEWLNDVLRMIQTPEDTYVYDQVI 769
Query: 692 SSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIE 751
S+IF+E+ L K ++ R+++ + +E + +++V+KE+F++HCAK +I
Sbjct: 770 STIFNEDRLVAK-----MQCQRESSKKSTCKNDYSEFLESIIEVSKEVFKRHCAKRFQIS 824
Query: 752 PMYLL-GDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRR 810
P++ L G + TVK+L G++LEL +ELR PF+ W +NQ SS+KRYE+S V+RR
Sbjct: 825 PLHTLDGKSTEISGKTVKVLIQRGEMLELCYELRTPFVMWIAANQVSSYKRYEVSWVHRR 884
Query: 811 AIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIW 870
A+GHS P R+LQGDFDIIGG+S +TEAEV+KV +D+V RF+ +++ I LNH L EA+
Sbjct: 885 AVGHSTPYRFLQGDFDIIGGSSPITEAEVIKVALDLVRRFYDSKATVIRLNHSKLAEAVC 944
Query: 871 SWAGIKAEHREKVAELL-AMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 929
SWAG+ + R+ VAE L + + P ++ KS+W +IR QLLQ+L L+E VV +L
Sbjct: 945 SWAGVPHDRRQNVAEFLSSTLVQYCPDKADRKSQWSLIRGQLLQDLRLSEEVVEKLHKAD 1004
Query: 930 LRFCGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYH 984
RFCG+AD L RLRG L DK KALD+L LR+W +E++I ID LMPP + Y+
Sbjct: 1005 QRFCGSADLVLARLRGTLFYDKSACKALDDLSTFLKCLRVWSVEEHITIDVLMPPSDYYY 1064
Query: 985 RNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLA 1044
+LFFQV+S KE P LLAVGGRYD L+ + WD+ Y ++ PP VG S+A
Sbjct: 1065 TDLFFQVYS-KEGNPVPSSHEKLLAVGGRYDMLMEQAWDKTY-----KSKPPGAVGVSIA 1118
Query: 1045 LETIIQHYP-VDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDP 1103
LE + + P D R E SVLVCS+GGGGLL ERMELVAELWE NIKAQFVP+ DP
Sbjct: 1119 LEKFLPNNPSSDVWLPRIEHSISVLVCSKGGGGLLNERMELVAELWEANIKAQFVPLEDP 1178
Query: 1104 SLTEQYEYASEHDIKCLVILTDTG-AQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162
SL EQYEYAS+HDIKCLV +T+ G +Q L+KVRHLD KKEK+V+RE +V+FL DAI+ Q
Sbjct: 1179 SLQEQYEYASDHDIKCLVFITEAGLSQTDLMKVRHLDAKKEKDVKREDIVKFLSDAISLQ 1238
Query: 1163 FRNPSLWS 1170
F+NP++WS
Sbjct: 1239 FKNPTIWS 1246
|
Source: Brachypodium distachyon Species: Brachypodium distachyon Genus: Brachypodium Family: Poaceae Order: Poales Class: Liliopsida Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1170 | ||||||
| UNIPROTKB|E2RS10 | 1651 | EIF2AK4 "Uncharacterized prote | 0.577 | 0.409 | 0.282 | 1e-72 | |
| DICTYBASE|DDB_G0272837 | 2258 | ifkA "PEK family protein kinas | 0.388 | 0.201 | 0.248 | 5.3e-72 | |
| POMBASE|SPBC36B7.09 | 1576 | gcn2 "eIF2 alpha kinase Gcn2" | 0.588 | 0.436 | 0.287 | 1.6e-71 | |
| UNIPROTKB|Q9P2K8 | 1649 | EIF2AK4 "Eukaryotic translatio | 0.573 | 0.406 | 0.270 | 1.2e-70 | |
| MGI|MGI:1353427 | 1648 | Eif2ak4 "eukaryotic translatio | 0.572 | 0.406 | 0.280 | 3.1e-70 | |
| UNIPROTKB|D4A7V9 | 1649 | Eif2ak4 "Protein Eif2ak4" [Rat | 0.572 | 0.406 | 0.276 | 8.9e-70 | |
| UNIPROTKB|E1BAL6 | 1649 | EIF2AK4 "Uncharacterized prote | 0.575 | 0.408 | 0.272 | 1e-69 | |
| DICTYBASE|DDB_G0276829 | 1358 | ifkB "PEK family protein kinas | 0.388 | 0.334 | 0.248 | 3e-67 | |
| RGD|1311439 | 1572 | Eif2ak4 "eukaryotic translatio | 0.572 | 0.426 | 0.276 | 1.5e-66 | |
| SGD|S000002691 | 1659 | GCN2 "Protein kinase" [Sacchar | 0.509 | 0.359 | 0.295 | 6.6e-65 |
| UNIPROTKB|E2RS10 EIF2AK4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 594 (214.2 bits), Expect = 1.0e-72, Sum P(4) = 1.0e-72
Identities = 202/715 (28%), Positives = 329/715 (46%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
YLYIQMEYC + TLR + + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 800 YLYIQMEYCEKSTLRDTIDQGLYQDTIRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 859
Query: 527 DARNDIKIGDFGLAK---FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIE-QG 582
D+ + +KIGDFGLA + D A Y +PE++
Sbjct: 860 DSDDHVKIGDFGLATDHLAFTADGKQDDTADHLIKSDPSGHLTGMVGTALYVSPEVQGSS 919
Query: 583 WPKIDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQEX 638
P ++K D++SLGI+FFE+ +HP TA ER VL+ L+ + P + + ++Q+
Sbjct: 920 RPTYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPEDFDDGEHTKQKS 979
Query: 639 XXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFD 696
ATELL+ L PPQME L +L ++ D Y +++ IF
Sbjct: 980 VISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLANVDGKAYRTMMAQIFS 1039
Query: 697 EETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL 756
+ + T N SI+ S + + D +V++ F++H A L P+ L
Sbjct: 1040 QRVSPAIDY--TYDSNMPKGFSIRTSKIQQHVCDTIVRI----FKKHGAVQL-CTPLLLP 1092
Query: 757 GDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR-RAIGH 814
+ ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R R +
Sbjct: 1093 QNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFRPRKLDR 1152
Query: 815 SPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGDLLEAIW 870
P L+ FDI+ S+L AEV+ +I+ F + I+LNH LL+AI+
Sbjct: 1153 FHPKELLECAFDIVTSTTNSSLPTAEVIYTICEIIQEFPALQERNYSIYLNHTMLLKAIF 1212
Query: 871 SWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 930
GI + +V +L + + E ++K+ + L + + + L
Sbjct: 1213 LHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGDLQDL 1272
Query: 931 RFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIESYHRNL 987
A + + + G K K L+E+ L+ I+ + I+ L+ ++ H +
Sbjct: 1273 T--PAINSLIKQKTGVAQLVKYGLKDLEEIIGLLKKLGIKLQVLINLGLVYKVQQ-HNGV 1329
Query: 988 FFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALET 1047
FQ +V + + E +LA GGRYD L+ + + +G P+ VG S+A++
Sbjct: 1330 IFQFVAVIRRRQRAISE--ILAAGGRYDLLIPQFRGPQALGPV-----PTAVGVSIAIDK 1382
Query: 1048 IIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTE 1107
I +PV + +L+ S G + + L +LW I AQ + S E
Sbjct: 1383 ISAAILNMEEPV-TISSCDLLIVSVGQMSMS-RAINLTQKLWSAGITAQIMYDWSQSQEE 1440
Query: 1108 QYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162
EY H+I + +++D G VK + + EK VQ L+ +L + ++
Sbjct: 1441 LQEYCRYHEITYVALVSDKGGSYVKVKSFEKERQTEKLVQESDLIDHVLQKLRTK 1495
|
|
| DICTYBASE|DDB_G0272837 ifkA "PEK family protein kinase IfkA" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 332 (121.9 bits), Expect = 5.3e-72, Sum P(6) = 5.3e-72
Identities = 126/507 (24%), Positives = 219/507 (43%)
Query: 573 FYTAPEI-EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVA 631
FY PEI E+ K DMYSLGI+FFE+ F T MER +L DL+ + PP + +
Sbjct: 1391 FYCCPEILEKNTKHYGTKVDMYSLGIIFFEMCFQFQTQMERSNILRDLRDNLKFPPGFES 1450
Query: 632 KFSEQEXXXXXXXXXXXXXXXXATELLQDAL-PPQMEYELLDNILRMMHSSEDTSIYDKV 690
+Q +LL+ L P +ME ++L ++ + ++ S++ +
Sbjct: 1451 TKPDQTQIIRSLLSRDPTQRPSTKQLLESGLLPSKMEDDILKEAIKTI-ANPTISLFSYL 1509
Query: 691 VSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLE- 749
+ +F L H + L N S + + R+ +++F H + ++
Sbjct: 1510 MEKLF---CLSNDEHIMSRYLYTSNPS---LTPMHLICREKTFSRLEKIFLNHGSIRIDT 1563
Query: 750 --IEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSV 807
+ P N K L G ++ L ++L +P+ R + + KRY S V
Sbjct: 1564 PTLFPKNPTNSTHPGAANVAKFLDESGTVVYLPYDLTIPWARHVVIHNIQQAKRYTFSKV 1623
Query: 808 YRRAI-GHSPPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRF----FHAESCD--- 857
YRR+ G SP Y + DFDIIG + + +++AE L++ ++I+ F F S
Sbjct: 1624 YRRSQPGFSPKELY-ECDFDIIGPSKSRHISDAETLRIIIEIMEEFKDELFGNNSGSNSG 1682
Query: 858 ----------IHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVI 907
I +NH LL++I S G++ V + +A + W+ W +
Sbjct: 1683 SGSGGSINYKIRINHYGLLDSILSECGVEKRFFTVVYQTVAQL--------HWRLNWAQV 1734
Query: 908 RRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRI 967
Q L+E L+ ++V+ + T R G Q + +L L K + +L + + +
Sbjct: 1735 A-QSLKEHGLSASIVSNISTY-FRQRGELAQCVTQLESLLANHKEATTGISDLKILVRNL 1792
Query: 968 EK-NIY----IDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1022
+ NI +D + Y+ L FQ + ++ + ++ GGRYD L+ +
Sbjct: 1793 QMINIIPRFLLDLSLIHNHQYYEGLVFQAY-IERPTLSNPSRTEIIMSGGRYDKLIKSLH 1851
Query: 1023 DREYVGYASRTNPPSGVGASLALETII 1049
+ N SGVG +LA E I+
Sbjct: 1852 PNPSLS----NNIVSGVGVTLACEKIV 1874
|
|
| POMBASE|SPBC36B7.09 gcn2 "eIF2 alpha kinase Gcn2" [Schizosaccharomyces pombe (taxid:4896)] | Back alignment and assigned GO terms |
|---|
Score = 564 (203.6 bits), Expect = 1.6e-71, Sum P(3) = 1.6e-71
Identities = 222/772 (28%), Positives = 350/772 (45%)
Query: 444 SSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQI 502
SS + ++ V QEN L +T LYIQMEYC + +L+ + D + W LFRQI
Sbjct: 700 SSDKDSSIEEASSVKTQENGLNAT-LYIQMEYCEKLSLQDIIR--DKIPVDEMWRLFRQI 756
Query: 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPXXXXXXX 562
+E LA+IH +G++HRDL P NIF D ++K+GDFGLA + Q D + +
Sbjct: 757 LEALAYIHSRGMMHRDLKPGNIFLDENRNVKLGDFGLATENENYQ-DNNDKWKNRQSADE 815
Query: 563 XXXXXXXXXYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLK 620
Y APE+ + + D K DMYSLGI+ FE+ FST+MER ++ ++
Sbjct: 816 DLTTGVGTA-LYVAPELLSRRNGVRYDAKVDMYSLGIILFEMCMTFSTSMERIRIIDTIR 874
Query: 621 QKG-ELPPSW-VAKFSEQEXXXXXXXXXXXXXXXXATELLQ-DALPPQMEYELLDNILRM 677
P ++ ++ S + + ELL+ +A+PP++ E + LR+
Sbjct: 875 SPSISFPSTFPFSRASHEFKVIHCLLQHDPTKRPSSQELLESEAIPPKVGEEFIQEGLRL 934
Query: 678 MHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSI--QYSDL--DTEL----R 729
+ S+ +T Y K++ +F + + +H T N S + + SD D+ L R
Sbjct: 935 L-SNPNTPYYLKLLKVLFGQ--VPDRHKDFTYDFNLSEESGVLSKVSDRGWDSLLACLVR 991
Query: 730 DYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRN--TVKLLTHGGDLLELSHELRLPF 787
D+VV+V FR+H AK E E L Q+ ++ +V LL G LL+L ++ LP+
Sbjct: 992 DHVVKV----FRRHGAK--ERESHILFPKSSQYDKDQASVSLLDKNGTLLQLPYDTVLPY 1045
Query: 788 IRWAISNQKSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALT--EAEVLKVTMD 845
R N K Y IS V+R A G P + FDI + L +AE +K +
Sbjct: 1046 ARNVARNAVEEEKTYLISDVFREAKGGGRPKAIKEISFDITTNSDNLDWYDAETIKALDE 1105
Query: 846 IVTRFFH-AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKW 904
++T ESC I +NH D+L +I + + + R +L + R S+
Sbjct: 1106 VLTEIPSLTESC-ILINHADILSSILDYLQVSKDKRRMATHILGQINQ-RLTLSQ----- 1158
Query: 905 VVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPT--RKALDEL-- 960
+R QL E + ++ L R ++ +LR + P R AL+ +
Sbjct: 1159 --VRNQLRIESLVPSTTLDDLSLFDFR--ENYEEGASKLRKIFGKEMPQKMRTALNYMER 1214
Query: 961 ---YLRIWRIEKNIYIDAL-MPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDY 1016
LR +I +Y L + E Y L FQ ++ EK L+ GGRYD
Sbjct: 1215 VVKLLRALKISHQLYFMPLCVYNFEFYDGGLMFQAINLAEK-------SELICAGGRYDK 1267
Query: 1017 LLHRMWDREYVGYASRTNPPSGVGASLALETII----------------QHYPVD-FKPV 1059
L+ R +D + A + + VG ALE ++ +H P K V
Sbjct: 1268 LV-RFFDPPLMRTARKKHV---VGICFALEKLVFSMLRYIRFHNSKQSSKHSPSPTLKSV 1323
Query: 1060 RNEAG--TSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDI 1117
A VLV S G +L E+ L+ ELW NI+A V SL E + I
Sbjct: 1324 GPWAPRRVDVLVTSIGKDSIL-EKCSLLQELWALNIQADIVLRGASSLEEIVTHYRSEGI 1382
Query: 1118 KCLVILTDTGAQ-KGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPSL 1168
++++ Q + VK R++ ++ E++ + + +LL I + RN S+
Sbjct: 1383 NWVLVVRQKNTQMEHSVKARNILKNEDDEIRFDEVGMWLLGEINERKRNESM 1434
|
|
| UNIPROTKB|Q9P2K8 EIF2AK4 "Eukaryotic translation initiation factor 2-alpha kinase 4" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 558 (201.5 bits), Expect = 1.2e-70, Sum P(3) = 1.2e-70
Identities = 195/721 (27%), Positives = 330/721 (45%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
YLYIQMEYC + TLR + + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 797 YLYIQMEYCEKSTLRDTIDQGLYRDTVRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 856
Query: 527 DARNDIKIGDFGLAK---FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQGW 583
D+ + +KIGDFGLA + D Y +PE+ QG
Sbjct: 857 DSDDHVKIGDFGLATDHLAFSADSKQDDQTGDLIKSDPSGHLTGMVGTALYVSPEV-QGS 915
Query: 584 PK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQE 637
K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ + P + + ++Q+
Sbjct: 916 TKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPEDFDDGEHAKQK 975
Query: 638 XXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSIF 695
ATELL+ L PPQME L +L ++ D Y +++ IF
Sbjct: 976 SVISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLTNVDGKAYRTMMAQIF 1035
Query: 696 DEE---TLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEP 752
+ +D + + L+ N +S +++ +V + +F++H A L P
Sbjct: 1036 SQRISPAIDYTYDSDILKGN--------FSIRTAKMQQHVCETIIRIFKRHGAVQL-CTP 1086
Query: 753 MYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR-R 810
+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R R
Sbjct: 1087 LLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRIPFARYVARNNILNLKRYCIERVFRPR 1146
Query: 811 AIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGDLL 866
+ P L+ FDI+ S L AE++ +I+ F + I+LNH LL
Sbjct: 1147 KLDRFHPKELLECAFDIVTSTTNSFLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTMLL 1206
Query: 867 EAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQ 926
+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1207 KAILLHCGIPEDKLSQVYIILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQKGD 1266
Query: 927 TVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIESY 983
L + + + G K K L+E+ L+ I+ + I+ L+ ++
Sbjct: 1267 LQDLM--PTINSLIKQKTGIAQLVKYGLKDLEEVVGLLKKLGIKLQVLINLGLVYKVQQ- 1323
Query: 984 HRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASL 1043
H + FQ + ++ + E +LA GGRYD L+ + + +G P+ +G S+
Sbjct: 1324 HNGIIFQFVAFIKRRQRAVPE--ILAAGGRYDLLIPQFRGPQALGPV-----PTAIGVSI 1376
Query: 1044 ALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDP 1103
A++ I ++ + + +LV S G + + L +LW I A+ +
Sbjct: 1377 AIDKISAAV-LNMEESVTISSCDLLVVSVGQMSMS-RAINLTQKLWTAGITAEIMYDWSQ 1434
Query: 1104 SLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQF 1163
S E EY H+I + +++D VKV+ + KE++ ++ L L+D + +
Sbjct: 1435 SQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTEKRVLETELVDHVLQKL 1490
Query: 1164 R 1164
R
Sbjct: 1491 R 1491
|
|
| MGI|MGI:1353427 Eif2ak4 "eukaryotic translation initiation factor 2 alpha kinase 4" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 561 (202.5 bits), Expect = 3.1e-70, Sum P(3) = 3.1e-70
Identities = 203/723 (28%), Positives = 332/723 (45%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
YLYIQMEYC + TLR + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 795 YLYIQMEYCEKSTLRDTIDQGLFRDTSRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 854
Query: 527 DARNDIKIGDFGLAK----FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 582
D+ + +KIGDFGLA F + D A Y +PE+ QG
Sbjct: 855 DSDDHVKIGDFGLATDHLAFTAEGKQDDQAGDGVIKSDPSGHLTGMVGTALYVSPEV-QG 913
Query: 583 WPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQ 636
K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ + P + + ++Q
Sbjct: 914 STKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPDDFDDGEHTKQ 973
Query: 637 EXXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 694
+ A ELL+ L PPQME L +L ++ D Y ++S I
Sbjct: 974 KSVISWLLNHDPAKRPTAMELLKSELLPPPQMEESELHEVLHHTLANIDGKAYRTMMSQI 1033
Query: 695 FDEE---TLDMKHHAGTLRLN-RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEI 750
F + +D + + L+ N T+ IQ +T +V+V F++H A L
Sbjct: 1034 FCQHISPAIDYTYDSDILKGNFLIRTAKIQQLVCET-----IVRV----FKRHGAVQL-C 1083
Query: 751 EPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR 809
P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R
Sbjct: 1084 TPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFR 1143
Query: 810 -RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGD 864
R + P L+ FDI+ S+L AE + +I+ F + I+LNH
Sbjct: 1144 PRKLDRFHPKELLECAFDIVTSTTNSSLPTAETIYTIYEIIQEFPALQERNYSIYLNHTM 1203
Query: 865 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNR 924
LL+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1204 LLKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQK 1263
Query: 925 LQTVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIE 981
L + + + G K + K L+++ L+ ++ + I+ L+ ++
Sbjct: 1264 GDLQDLT--PTINSLIKQKTGVAQLVKYSLKDLEDVVGLLKKLGVKLQVSINLGLVYKVQ 1321
Query: 982 SYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA 1041
H + FQ + ++ + E +LA GGRYD L+ + + VG P+ VG
Sbjct: 1322 Q-HTGIIFQFLAFSKRRQRVVPE--ILAAGGRYDLLIPKFRGPQTVGPV-----PTAVGV 1373
Query: 1042 SLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1101
S+A++ I +PV + +LV S G + + L +LW I A+ +
Sbjct: 1374 SIAIDKIFAAVLNMEEPV-TVSSCDLLVVSVGQMSMS-RAINLTQKLWTAGITAEIMYDW 1431
Query: 1102 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161
S E EY H+I + +++D VKV+ + KE++ ++ L L+D +
Sbjct: 1432 SQSQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTEKRVLESDLVDHVMQ 1487
Query: 1162 QFR 1164
+ R
Sbjct: 1488 KLR 1490
|
|
| UNIPROTKB|D4A7V9 Eif2ak4 "Protein Eif2ak4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 556 (200.8 bits), Expect = 8.9e-70, Sum P(3) = 8.9e-70
Identities = 200/723 (27%), Positives = 332/723 (45%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
YLYIQMEYC + TLR + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 796 YLYIQMEYCEKSTLRDTIDQGLFRDTSRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 855
Query: 527 DARNDIKIGDFGLAK----FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 582
D+ + +KIGDFGLA F + D A Y +PE+ QG
Sbjct: 856 DSDDHVKIGDFGLATDHLAFNAEGKQDDQAGDHVIKSDPSGHLTGMVGTALYVSPEV-QG 914
Query: 583 WPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQ 636
K ++K D++SLGI+ FE+ +HP TA ER VL+ L+ + P + + ++Q
Sbjct: 915 STKSAYNQKVDLFSLGIILFEMSYHPMVTASERIFVLNQLRDPTSPKFPDDFEDGEHTKQ 974
Query: 637 EXXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 694
+ A ELL+ L PPQME L +L ++ D Y ++S +
Sbjct: 975 KSVISWLLNHDPAKRPTAMELLKSELLPPPQMEESELHEVLHHTLANTDGKAYRTMMSQL 1034
Query: 695 FDEET---LDMKHHAGTLRLN-RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEI 750
F + + +D + + L+ N T+ IQ +T +V+V F++H A L
Sbjct: 1035 FCQHSSPAIDYTYDSDILKGNFLIRTAKIQQLVCET-----IVRV----FKRHGAVQL-C 1084
Query: 751 EPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR 809
P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R
Sbjct: 1085 TPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFR 1144
Query: 810 -RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGD 864
R + P L+ FDI+ S+L AE + +++ F + I+LNH
Sbjct: 1145 PRKLDRFHPKELLECAFDIVTSTANSSLPTAETIYTIYEVIQEFPALQERNYSIYLNHTM 1204
Query: 865 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNR 924
LL+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1205 LLKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQK 1264
Query: 925 LQTVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIE 981
L + + + G K + K L+E+ L+ ++ + I+ L+ ++
Sbjct: 1265 GDLQDLT--PTINSLIKQKTGIAQLVKYSLKDLEEVVGLLKKLGVKLQVSINLGLVYKVQ 1322
Query: 982 SYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA 1041
H + FQ + ++ + E +LA GGRYD L+ + + +G P+ VG
Sbjct: 1323 Q-HNGIIFQFLAFSKRRQRVVPE--ILAAGGRYDLLIPKFRGPQALGPV-----PTAVGV 1374
Query: 1042 SLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1101
S+A++ I +PV + +LV S G + + L +LW I A+ +
Sbjct: 1375 SIAIDKIFAAVLNMGEPV-TVSSCDLLVVSAGQMSMS-RAINLTQKLWTAGITAEIMYDW 1432
Query: 1102 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161
S E EY H+I + +++D VKV+ + KE++ ++ L L+D +
Sbjct: 1433 SQSQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTEKRVLESDLVDHVMQ 1488
Query: 1162 QFR 1164
+ R
Sbjct: 1489 KLR 1491
|
|
| UNIPROTKB|E1BAL6 EIF2AK4 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 562 (202.9 bits), Expect = 1.0e-69, Sum P(3) = 1.0e-69
Identities = 196/720 (27%), Positives = 331/720 (45%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
YLYIQMEYC + TLR + + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 796 YLYIQMEYCEKSTLRDTIDQGLYRDTVRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 855
Query: 527 DARNDIKIGDFGLAK----FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 582
D+ + +KIGDFGLA F + D + Y +PE+ QG
Sbjct: 856 DSDDHVKIGDFGLATDHLAFAADGKQDDTSGDHLIKSDPSGHLTGMVGTALYVSPEV-QG 914
Query: 583 WPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQ 636
K ++K D++SLGI+FFE+ +HP TA ER VL+ L+ + P + + ++Q
Sbjct: 915 STKSAYNQKVDLFSLGIIFFEMSYHPMVTASERIFVLNQLRDPTSPKFPEDFDDGEHTKQ 974
Query: 637 EXXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 694
+ ATELL+ L PPQME L +L ++ D Y ++ I
Sbjct: 975 KSVISWLLNHDPAKRPTATELLKSELLPPPQMEESELHEVLHHTLANVDGKAYRTMMGQI 1034
Query: 695 FDEE---TLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIE 751
F + +D + + L+ + SI+ + + + + ++++ F++H A L
Sbjct: 1035 FAQRISPAIDYTYDSDILK----GSFSIRTAKIQQHVCETIIRI----FKRHGAVQL-CT 1085
Query: 752 PMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR- 809
P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R
Sbjct: 1086 PLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFRP 1145
Query: 810 RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGDL 865
R + P L+ FDI+ S+L AE++ +I+ F + I+LNH L
Sbjct: 1146 RKLDRFHPKELLECAFDIVTSTTNSSLPTAEIIYTIYEIIQEFPALQERNYSIYLNHTML 1205
Query: 866 LEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 925
L+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1206 LKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSSSLCRLYKFIEQKG 1265
Query: 926 QTVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIES 982
+ L + + + G K K L+E+ L+ + I+ + I+ L+ ++
Sbjct: 1266 ELQDLT--PTINSLIKQKTGVAQLVKYGLKDLEEVVGLLKKFGIKLQVLINLGLVYKVQQ 1323
Query: 983 YHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGAS 1042
H + FQ + + + E +LA GGRYD L+ + + +G P+ +G S
Sbjct: 1324 -HSGIIFQFVAFIRRRQRAISE--ILAAGGRYDLLIPQFRGPQALGPV-----PTAIGVS 1375
Query: 1043 LALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPD 1102
+A++ I +PV + +LV S G + + L +LW I A+ +
Sbjct: 1376 IAIDKITTAVLNMEEPV-TVSSCDLLVVSVGQMSMS-RAINLTQKLWSAGITAEIMYDWS 1433
Query: 1103 PSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162
S E EY H+I + +++D VK D + EK V LV ++ + ++
Sbjct: 1434 QSQEELQEYCRHHEITYVALVSDKEGSHVKVKSFEKDRQTEKRVPESDLVDHVVQKLRTK 1493
|
|
| DICTYBASE|DDB_G0276829 ifkB "PEK family protein kinase IfkB" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 332 (121.9 bits), Expect = 3.0e-67, Sum P(4) = 3.0e-67
Identities = 126/507 (24%), Positives = 219/507 (43%)
Query: 573 FYTAPEI-EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVA 631
FY PEI E+ K DMYSLGI+FFE+ F T MER +L DL+ + PP + +
Sbjct: 491 FYCCPEILEKNTKHYGTKVDMYSLGIIFFEMCFQFQTQMERSNILRDLRDNLKFPPGFES 550
Query: 632 KFSEQEXXXXXXXXXXXXXXXXATELLQDAL-PPQMEYELLDNILRMMHSSEDTSIYDKV 690
+Q +LL+ L P +ME ++L ++ + ++ S++ +
Sbjct: 551 TKPDQTQIIRSLLSRDPTQRPSTKQLLESGLLPSKMEDDILKEAIKTI-ANPTISLFSYL 609
Query: 691 VSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLE- 749
+ +F L H + L N S + + R+ +++F H + ++
Sbjct: 610 MEKLF---CLSNDEHIMSRYLYTSNPS---LTPMHLICREKTFSRLEKIFLNHGSIRIDT 663
Query: 750 --IEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSV 807
+ P N K L G ++ L ++L +P+ R + + KRY S V
Sbjct: 664 PTLFPKNPTNSTHPGAANVAKFLDESGTVVYLPYDLTIPWARHVVIHNIQQAKRYTFSKV 723
Query: 808 YRRAI-GHSPPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRF----FHAESCD--- 857
YRR+ G SP Y + DFDIIG + + +++AE L++ ++I+ F F S
Sbjct: 724 YRRSQPGFSPKELY-ECDFDIIGPSKSRHISDAETLRIIIEIMEEFKDELFGNNSGSNSG 782
Query: 858 ----------IHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVI 907
I +NH LL++I S G++ V + +A + W+ W +
Sbjct: 783 SGSGGSINYKIRINHYGLLDSILSECGVEKRFFTVVYQTVAQL--------HWRLNWAQV 834
Query: 908 RRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRI 967
Q L+E L+ ++V+ + T R G Q + +L L K + +L + + +
Sbjct: 835 A-QSLKEHGLSASIVSNISTY-FRQRGELAQCVTQLESLLANHKEATTGISDLKILVRNL 892
Query: 968 EK-NIY----IDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1022
+ NI +D + Y+ L FQ + ++ + ++ GGRYD L+ +
Sbjct: 893 QMINIIPRFLLDLSLIHNHQYYEGLVFQAY-IERPTLSNPSRTEIIMSGGRYDKLIKSLH 951
Query: 1023 DREYVGYASRTNPPSGVGASLALETII 1049
+ N SGVG +LA E I+
Sbjct: 952 PNPSLS----NNIVSGVGVTLACEKIV 974
|
|
| RGD|1311439 Eif2ak4 "eukaryotic translation initiation factor 2 alpha kinase 4" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 556 (200.8 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 200/723 (27%), Positives = 332/723 (45%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
YLYIQMEYC + TLR + D W LFR+I++GLA+IH +G+IHRDL P NIF
Sbjct: 719 YLYIQMEYCEKSTLRDTIDQGLFRDTSRLWRLFREILDGLAYIHEKGMIHRDLKPVNIFL 778
Query: 527 DARNDIKIGDFGLAK----FLKLEQLDQDAAFPXXXXXXXXXXXXXXXXYFYTAPEIEQG 582
D+ + +KIGDFGLA F + D A Y +PE+ QG
Sbjct: 779 DSDDHVKIGDFGLATDHLAFNAEGKQDDQAGDHVIKSDPSGHLTGMVGTALYVSPEV-QG 837
Query: 583 WPK--IDEKADMYSLGIVFFEL-WHPFSTAMERQIVLSDLKQ--KGELPPSWV-AKFSEQ 636
K ++K D++SLGI+ FE+ +HP TA ER VL+ L+ + P + + ++Q
Sbjct: 838 STKSAYNQKVDLFSLGIILFEMSYHPMVTASERIFVLNQLRDPTSPKFPDDFEDGEHTKQ 897
Query: 637 EXXXXXXXXXXXXXXXXATELLQDAL--PPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 694
+ A ELL+ L PPQME L +L ++ D Y ++S +
Sbjct: 898 KSVISWLLNHDPAKRPTAMELLKSELLPPPQMEESELHEVLHHTLANTDGKAYRTMMSQL 957
Query: 695 FDEET---LDMKHHAGTLRLN-RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEI 750
F + + +D + + L+ N T+ IQ +T +V+V F++H A L
Sbjct: 958 FCQHSSPAIDYTYDSDILKGNFLIRTAKIQQLVCET-----IVRV----FKRHGAVQL-C 1007
Query: 751 EPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR 809
P+ L + ++ N L + H G L+ L +LR+PF R+ N + KRY I V+R
Sbjct: 1008 TPLLLPRNRQIYEHNEAALFMDHSGMLVMLPFDLRVPFARYVARNNILNLKRYCIERVFR 1067
Query: 810 -RAIGHSPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRF--FHAESCDIHLNHGD 864
R + P L+ FDI+ S+L AE + +++ F + I+LNH
Sbjct: 1068 PRKLDRFHPKELLECAFDIVTSTANSSLPTAETIYTIYEVIQEFPALQERNYSIYLNHTM 1127
Query: 865 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNR 924
LL+AI GI + +V +L + + E ++K+ + L + + +
Sbjct: 1128 LLKAILLHCGIPEDKLSQVYVILYDAVTEKLTRREVEAKFCNLSLSSNSLCRLYKFIEQK 1187
Query: 925 LQTVGLRFCGAADQALPRLRGALPADKPTRKALDELY--LRIWRIEKNIYID-ALMPPIE 981
L + + + G K + K L+E+ L+ ++ + I+ L+ ++
Sbjct: 1188 GDLQDLT--PTINSLIKQKTGIAQLVKYSLKDLEEVVGLLKKLGVKLQVSINLGLVYKVQ 1245
Query: 982 SYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGA 1041
H + FQ + ++ + E +LA GGRYD L+ + + +G P+ VG
Sbjct: 1246 Q-HNGIIFQFLAFSKRRQRVVPE--ILAAGGRYDLLIPKFRGPQALGPV-----PTAVGV 1297
Query: 1042 SLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1101
S+A++ I +PV + +LV S G + + L +LW I A+ +
Sbjct: 1298 SIAIDKIFAAVLNMGEPV-TVSSCDLLVVSAGQMSMS-RAINLTQKLWTAGITAEIMYDW 1355
Query: 1102 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161
S E EY H+I + +++D VKV+ + KE++ ++ L L+D +
Sbjct: 1356 SQSQEELQEYCRHHEITYVALVSDKEGSH--VKVKSFE--KERQTEKRVLESDLVDHVMQ 1411
Query: 1162 QFR 1164
+ R
Sbjct: 1412 KLR 1414
|
|
| SGD|S000002691 GCN2 "Protein kinase" [Saccharomyces cerevisiae (taxid:4932)] | Back alignment and assigned GO terms |
|---|
Score = 540 (195.1 bits), Expect = 6.6e-65, Sum P(4) = 6.6e-65
Identities = 203/687 (29%), Positives = 330/687 (48%)
Query: 463 KLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520
K +ST L+IQMEYC RTL + S + + ++ W LFRQI+E L++IH QGIIHRDL
Sbjct: 779 KKKST-LFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLK 837
Query: 521 PNNIFFDARNDIKIGDFGLAKFL--KLEQLDQDAA-FPXXXXXXXXXXXXXXXXYFYTAP 577
P NIF D ++KIGDFGLAK + L+ L D+ P Y A
Sbjct: 838 PMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTA----MYVAT 893
Query: 578 EIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKG-ELPPSWVA-KFSE 635
E+ G +EK DMYSLGI+FFE+ +PFST MER +L L+ E PP + K
Sbjct: 894 EVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKV 953
Query: 636 QEXXXXXXXXXXXXXXXXATELLQDA-LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 694
++ A LL LP + + E++ L+ + S+ + +V S+
Sbjct: 954 EKKIIRLLIDHDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL-SNPSSPWQQQVRESL 1012
Query: 695 FDEETLDMKHHAGTLRLNRDNT--SSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEP 752
F++ ++ T + DN+ +S ++++ LR + + ++FR+H P
Sbjct: 1013 FNQS------YSLTNDILFDNSVPTSTPFANI---LRSQMTEEVVKIFRKHGGIENNAPP 1063
Query: 753 MYLLGDCPQF-KRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRA 811
+ P + +N ++L GG +L+L ++L P R+ N K+Y + VYR
Sbjct: 1064 R-IFPKAPIYGTQNVYEVLDKGGTVLQLQYDLTYPMARYLSKNPSLISKQYRMQHVYRPP 1122
Query: 812 IGHS----PPNRYLQGDFDIIGGASALT---EAEVLKVTMDIVTRF--FHAESCDIHLNH 862
HS P ++ + DFDII +S+ + +AE LK+ +I+T F F + LNH
Sbjct: 1123 -DHSRSSLEPRKFGEIDFDIISKSSSESGFYDAESLKIIDEILTVFPVFEKTNTFFILNH 1181
Query: 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVV 922
D+LE+++++ I R V+ +L+ +G R +K ++ +L +LN++ +
Sbjct: 1182 ADILESVFNFTNIDKAQRPLVSRMLSQVGFAR----SFKE----VKNELKAQLNISSTAL 1233
Query: 923 NRLQTVGLRF-CGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDAL 976
N L+ R AA + L +L P K +L + YL+ + +N+ I
Sbjct: 1234 NDLELFDFRLDFEAAKKRLYKLMIDSPHLKKIEDSLSHISKVLSYLKPLEVARNVVIS-- 1291
Query: 977 MPPIESYHRNLFFQVFSVKEKYPATLVEGT---LLAVGGRYDYLLHRMWDREYVGYASRT 1033
P+ +Y+ + F++ + + A +G+ ++A GGRYD L+ + R G S +
Sbjct: 1292 --PLSNYN-SAFYKGGIM---FHAVYDDGSSRNMIAAGGRYDTLIS-FFARPS-GKKS-S 1342
Query: 1034 NPPSGVGASLALETII---QHY-------------------PVDFKPVRNEAGTSVLVCS 1071
N VG +LA ETI Q+Y VD+KP R + VL+ S
Sbjct: 1343 NTRKAVGFNLAWETIFGIAQNYFKLASGNRIKKRNRFLKDTAVDWKPSRCD----VLISS 1398
Query: 1072 RGGGGLLVERMELVAELWEENIKAQFV 1098
L + ++ LW++NIKA +
Sbjct: 1399 FSNSLLDTIGVTILNTLWKQNIKADML 1425
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q9LX30 | GCN2_ARATH | 2, ., 7, ., 1, 1, ., 1 | 0.6917 | 0.9897 | 0.9331 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1170 | |||
| smart00220 | 254 | smart00220, S_TKc, Serine/Threonine protein kinase | 1e-65 | |
| pfam00069 | 260 | pfam00069, Pkinase, Protein kinase domain | 4e-59 | |
| cd00180 | 215 | cd00180, PKc, Catalytic domain of Protein Kinases | 1e-56 | |
| cd08215 | 258 | cd08215, STKc_Nek, Catalytic domain of the Protein | 1e-53 | |
| cd06606 | 260 | cd06606, STKc_MAPKKK, Catalytic domain of the Prot | 6e-47 | |
| cd08529 | 256 | cd08529, STKc_FA2-like, Catalytic domain of the Pr | 1e-39 | |
| cd08217 | 265 | cd08217, STKc_Nek2, Catalytic domain of the Protei | 4e-39 | |
| cd05122 | 253 | cd05122, PKc_STE, Catalytic domain of STE family P | 3e-36 | |
| cd08530 | 256 | cd08530, STKc_CNK2-like, Catalytic domain of the P | 8e-35 | |
| cd07829 | 282 | cd07829, STKc_CDK_like, Catalytic domain of Cyclin | 2e-34 | |
| cd05579 | 265 | cd05579, STKc_MAST_like, Catalytic domain of Micro | 1e-33 | |
| COG0515 | 384 | COG0515, SPS1, Serine/threonine protein kinase [Ge | 4e-33 | |
| cd08221 | 256 | cd08221, STKc_Nek9, Catalytic domain of the Protei | 1e-32 | |
| cd06626 | 264 | cd06626, STKc_MEKK4, Catalytic domain of the Prote | 3e-32 | |
| cd06623 | 264 | cd06623, PKc_MAPKK_plant_like, Catalytic domain of | 1e-31 | |
| cd05581 | 280 | cd05581, STKc_PDK1, Catalytic domain of the Protei | 3e-31 | |
| cd07832 | 286 | cd07832, STKc_CCRK, Catalytic domain of the Serine | 5e-31 | |
| cd08218 | 256 | cd08218, STKc_Nek1, Catalytic domain of the Protei | 6e-31 | |
| cd06627 | 254 | cd06627, STKc_Cdc7_like, Catalytic domain of Cell | 9e-31 | |
| cd05118 | 283 | cd05118, STKc_CMGC, Catalytic domain of CMGC famil | 1e-30 | |
| cd07834 | 330 | cd07834, STKc_MAPK, Catalytic domain of the Serine | 1e-30 | |
| cd06614 | 286 | cd06614, STKc_PAK, Catalytic domain of the Protein | 5e-30 | |
| cd08225 | 257 | cd08225, STKc_Nek5, Catalytic domain of the Protei | 2e-29 | |
| PLN02972 | 763 | PLN02972, PLN02972, Histidyl-tRNA synthetase | 4e-29 | |
| cd05123 | 250 | cd05123, STKc_AGC, Catalytic domain of AGC family | 5e-29 | |
| cd07840 | 287 | cd07840, STKc_CDK9_like, Catalytic domain of Cycli | 3e-28 | |
| cd07833 | 288 | cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep | 6e-28 | |
| cd08224 | 267 | cd08224, STKc_Nek6_Nek7, Catalytic domain of the P | 2e-27 | |
| cd06632 | 258 | cd06632, STKc_MEKK1_plant, Catalytic domain of the | 3e-27 | |
| cd08219 | 255 | cd08219, STKc_Nek3, Catalytic domain of the Protei | 4e-27 | |
| cd06628 | 267 | cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o | 2e-26 | |
| cd06609 | 274 | cd06609, STKc_MST3_like, Catalytic domain of Mamma | 2e-26 | |
| cd06629 | 272 | cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o | 3e-26 | |
| cd08220 | 256 | cd08220, STKc_Nek8, Catalytic domain of the Protei | 3e-26 | |
| cd05572 | 262 | cd05572, STKc_cGK_PKG, Catalytic domain of the Pro | 4e-26 | |
| COG0124 | 429 | COG0124, HisS, Histidyl-tRNA synthetase [Translati | 2e-25 | |
| cd06612 | 256 | cd06612, STKc_MST1_2, Catalytic domain of the Prot | 6e-25 | |
| smart00219 | 257 | smart00219, TyrKc, Tyrosine kinase, catalytic doma | 1e-24 | |
| cd06605 | 265 | cd06605, PKc_MAPKK, Catalytic domain of the dual-s | 1e-24 | |
| smart00221 | 258 | smart00221, STYKc, Protein kinase; unclassified sp | 1e-24 | |
| cd07835 | 283 | cd07835, STKc_CDK1_like, Catalytic domain of Cycli | 1e-23 | |
| cd06610 | 267 | cd06610, STKc_OSR1_SPAK, Catalytic domain of the P | 1e-23 | |
| cd08223 | 257 | cd08223, STKc_Nek4, Catalytic domain of the Protei | 3e-23 | |
| cd07861 | 285 | cd07861, STKc_CDK1_euk, Catalytic domain of the Se | 5e-23 | |
| cd08528 | 269 | cd08528, STKc_Nek10, Catalytic domain of the Prote | 6e-23 | |
| cd07839 | 284 | cd07839, STKc_CDK5, Catalytic domain of the Serine | 6e-23 | |
| cd05580 | 290 | cd05580, STKc_PKA, Catalytic domain of the Protein | 6e-23 | |
| cd07856 | 328 | cd07856, STKc_Sty1_Hog1, Catalytic domain of the S | 7e-23 | |
| cd05573 | 350 | cd05573, STKc_ROCK_NDR_like, Catalytic domain of R | 1e-22 | |
| pfam07714 | 258 | pfam07714, Pkinase_Tyr, Protein tyrosine kinase | 2e-22 | |
| cd07830 | 283 | cd07830, STKc_MAK_like, Catalytic domain of Male g | 2e-22 | |
| PTZ00266 | 1021 | PTZ00266, PTZ00266, NIMA-related protein kinase; P | 8e-22 | |
| cd06613 | 262 | cd06613, STKc_MAP4K3_like, Catalytic domain of Mit | 8e-22 | |
| cd07841 | 298 | cd07841, STKc_CDK7, Catalytic domain of the Serine | 9e-22 | |
| cd07838 | 287 | cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc | 2e-21 | |
| cd07860 | 284 | cd07860, STKc_CDK2_3, Catalytic domain of the Seri | 8e-21 | |
| cd06625 | 263 | cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ | 1e-20 | |
| cd05578 | 258 | cd05578, STKc_Yank1, Catalytic domain of the Prote | 3e-20 | |
| cd00192 | 262 | cd00192, PTKc, Catalytic domain of Protein Tyrosin | 6e-20 | |
| cd07865 | 310 | cd07865, STKc_CDK9, Catalytic domain of the Serine | 6e-20 | |
| cd07837 | 295 | cd07837, STKc_CdkB_plant, Catalytic domain of the | 2e-19 | |
| cd07854 | 342 | cd07854, STKc_MAPK4_6, Catalytic domain of the Ser | 3e-19 | |
| cd06651 | 266 | cd06651, STKc_MEKK3, Catalytic domain of the Prote | 3e-19 | |
| cd06621 | 287 | cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of | 4e-19 | |
| PLN00009 | 294 | PLN00009, PLN00009, cyclin-dependent kinase A; Pro | 5e-19 | |
| cd07847 | 286 | cd07847, STKc_CDKL1_4, Catalytic domain of the Ser | 5e-19 | |
| cd08222 | 260 | cd08222, STKc_Nek11, Catalytic domain of the Prote | 5e-19 | |
| cd06917 | 277 | cd06917, STKc_NAK1_like, Catalytic domain of Funga | 7e-19 | |
| PTZ00267 | 478 | PTZ00267, PTZ00267, NIMA-related protein kinase; P | 8e-19 | |
| cd06652 | 265 | cd06652, STKc_MEKK2, Catalytic domain of the Prote | 1e-18 | |
| cd07864 | 302 | cd07864, STKc_CDK12, Catalytic domain of the Serin | 2e-18 | |
| cd07851 | 343 | cd07851, STKc_p38, Catalytic domain of the Serine/ | 8e-18 | |
| cd05038 | 284 | cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai | 2e-17 | |
| cd06640 | 277 | cd06640, STKc_MST4, Catalytic domain of the Protei | 3e-17 | |
| cd05599 | 364 | cd05599, STKc_NDR_like, Catalytic domain of Nuclea | 3e-17 | |
| cd06611 | 280 | cd06611, STKc_SLK_like, Catalytic domain of Ste20- | 5e-17 | |
| PRK13184 | 932 | PRK13184, pknD, serine/threonine-protein kinase; R | 5e-17 | |
| cd08229 | 267 | cd08229, STKc_Nek7, Catalytic domain of the Protei | 5e-17 | |
| cd07855 | 334 | cd07855, STKc_ERK5, Catalytic domain of the Serine | 5e-17 | |
| cd07845 | 309 | cd07845, STKc_CDK10, Catalytic domain of the Serin | 6e-17 | |
| cd07836 | 284 | cd07836, STKc_Pho85, Catalytic domain of the Serin | 7e-17 | |
| cd05629 | 377 | cd05629, STKc_NDR_like_fungal, Catalytic domain of | 1e-16 | |
| cd05612 | 291 | cd05612, STKc_PRKX_like, Catalytic domain of PRKX- | 1e-16 | |
| cd05611 | 260 | cd05611, STKc_Rim15_like, Catalytic domain of fung | 2e-16 | |
| cd05081 | 284 | cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) | 2e-16 | |
| cd07859 | 338 | cd07859, STKc_TDY_MAPK_plant, Catalytic domain of | 2e-16 | |
| cd07853 | 372 | cd07853, STKc_NLK, Catalytic domain of the Serine/ | 2e-16 | |
| PTZ00024 | 335 | PTZ00024, PTZ00024, cyclin-dependent protein kinas | 3e-16 | |
| cd07843 | 293 | cd07843, STKc_CDC2L1, Catalytic domain of the Seri | 4e-16 | |
| cd07849 | 336 | cd07849, STKc_ERK1_2_like, Catalytic domain of Ext | 5e-16 | |
| cd07858 | 337 | cd07858, STKc_TEY_MAPK_plant, Catalytic domain of | 6e-16 | |
| cd07879 | 342 | cd07879, STKc_p38delta_MAPK13, Catalytic domain of | 8e-16 | |
| cd06644 | 292 | cd06644, STKc_STK10_LOK, Catalytic domain of the P | 1e-15 | |
| cd08228 | 267 | cd08228, STKc_Nek6, Catalytic domain of the Protei | 1e-15 | |
| cd06641 | 277 | cd06641, STKc_MST3, Catalytic domain of the Protei | 2e-15 | |
| cd06624 | 268 | cd06624, STKc_ASK, Catalytic domain of the Protein | 3e-15 | |
| cd07850 | 353 | cd07850, STKc_JNK, Catalytic domain of the Serine/ | 3e-15 | |
| cd07846 | 286 | cd07846, STKc_CDKL2_3, Catalytic domain of the Ser | 5e-15 | |
| cd07880 | 343 | cd07880, STKc_p38gamma_MAPK12, Catalytic domain of | 6e-15 | |
| cd07875 | 364 | cd07875, STKc_JNK1, Catalytic domain of the Serine | 6e-15 | |
| cd06642 | 277 | cd06642, STKc_STK25-YSK1, Catalytic domain of the | 1e-14 | |
| cd06630 | 268 | cd06630, STKc_MEKK1, Catalytic domain of the Prote | 2e-14 | |
| PTZ00283 | 496 | PTZ00283, PTZ00283, serine/threonine protein kinas | 2e-14 | |
| cd05574 | 316 | cd05574, STKc_phototropin_like, Catalytic domain o | 2e-14 | |
| cd06617 | 283 | cd06617, PKc_MKK3_6, Catalytic domain of the dual- | 2e-14 | |
| cd05582 | 318 | cd05582, STKc_RSK_N, N-terminal catalytic domain o | 2e-14 | |
| cd06638 | 286 | cd06638, STKc_myosinIIIA, Catalytic domain of the | 4e-14 | |
| TIGR03903 | 1266 | TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas | 4e-14 | |
| cd07874 | 355 | cd07874, STKc_JNK3, Catalytic domain of the Serine | 5e-14 | |
| cd05584 | 323 | cd05584, STKc_p70S6K, Catalytic domain of the Prot | 5e-14 | |
| cd06607 | 307 | cd06607, STKc_TAO, Catalytic domain of the Protein | 6e-14 | |
| cd07852 | 337 | cd07852, STKc_MAPK15, Catalytic domain of the Seri | 6e-14 | |
| cd00773 | 261 | cd00773, HisRS-like_core, Class II Histidinyl-tRNA | 6e-14 | |
| cd06653 | 264 | cd06653, STKc_MEKK3_like_1, Catalytic domain of MA | 8e-14 | |
| cd07876 | 359 | cd07876, STKc_JNK2, Catalytic domain of the Serine | 9e-14 | |
| cd07877 | 345 | cd07877, STKc_p38alpha_MAPK14, Catalytic domain of | 9e-14 | |
| cd05600 | 333 | cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun | 1e-13 | |
| cd06618 | 296 | cd06618, PKc_MKK7, Catalytic domain of the dual-sp | 1e-13 | |
| cd06659 | 297 | cd06659, STKc_PAK6, Catalytic domain of the Protei | 1e-13 | |
| cd06608 | 275 | cd06608, STKc_myosinIII_like, Catalytic domain of | 1e-13 | |
| cd07878 | 343 | cd07878, STKc_p38beta_MAPK11, Catalytic domain of | 2e-13 | |
| cd05583 | 288 | cd05583, STKc_MSK_N, N-terminal catalytic domain o | 2e-13 | |
| cd07842 | 316 | cd07842, STKc_CDK8_like, Catalytic domain of Cycli | 2e-13 | |
| cd05577 | 277 | cd05577, STKc_GRK, Catalytic domain of the Protein | 3e-13 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 7e-13 | |
| cd07872 | 309 | cd07872, STKc_PCTAIRE2, Catalytic domain of the Se | 7e-13 | |
| cd06631 | 265 | cd06631, STKc_YSK4, Catalytic domain of the Protei | 8e-13 | |
| cd05628 | 363 | cd05628, STKc_NDR1, Catalytic domain of the Protei | 9e-13 | |
| cd07873 | 301 | cd07873, STKc_PCTAIRE1, Catalytic domain of the Se | 9e-13 | |
| cd07857 | 332 | cd07857, STKc_MPK1, Catalytic domain of the Serine | 1e-12 | |
| PRK00037 | 412 | PRK00037, hisS, histidyl-tRNA synthetase; Reviewed | 1e-12 | |
| PTZ00263 | 329 | PTZ00263, PTZ00263, protein kinase A catalytic sub | 1e-12 | |
| PLN00034 | 353 | PLN00034, PLN00034, mitogen-activated protein kina | 1e-12 | |
| cd05080 | 283 | cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma | 2e-12 | |
| cd07844 | 291 | cd07844, STKc_PCTAIRE_like, Catalytic domain of PC | 2e-12 | |
| cd06639 | 291 | cd06639, STKc_myosinIIIB, Catalytic domain of the | 2e-12 | |
| PHA03209 | 357 | PHA03209, PHA03209, serine/threonine kinase US3; P | 3e-12 | |
| cd05586 | 330 | cd05586, STKc_Sck1_like, Catalytic domain of Suppr | 3e-12 | |
| cd05632 | 285 | cd05632, STKc_GRK5, Catalytic domain of the Protei | 3e-12 | |
| cd05603 | 321 | cd05603, STKc_SGK2, Catalytic domain of the Protei | 4e-12 | |
| cd05630 | 285 | cd05630, STKc_GRK6, Catalytic domain of the Protei | 4e-12 | |
| cd06616 | 288 | cd06616, PKc_MKK4, Catalytic domain of the dual-sp | 4e-12 | |
| cd07848 | 287 | cd07848, STKc_CDKL5, Catalytic domain of the Serin | 5e-12 | |
| cd05592 | 316 | cd05592, STKc_nPKC_theta_delta, Catalytic domain o | 6e-12 | |
| cd07871 | 288 | cd07871, STKc_PCTAIRE3, Catalytic domain of the Se | 6e-12 | |
| cd06620 | 284 | cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of | 6e-12 | |
| cd06635 | 317 | cd06635, STKc_TAO1, Catalytic domain of the Protei | 6e-12 | |
| TIGR00442 | 397 | TIGR00442, hisS, histidyl-tRNA synthetase | 6e-12 | |
| cd05570 | 318 | cd05570, STKc_PKC, Catalytic domain of the Protein | 1e-11 | |
| cd06634 | 308 | cd06634, STKc_TAO2, Catalytic domain of the Protei | 1e-11 | |
| cd05614 | 332 | cd05614, STKc_MSK2_N, N-terminal catalytic domain | 1e-11 | |
| cd07869 | 303 | cd07869, STKc_PFTAIRE1, Catalytic domain of the Se | 2e-11 | |
| smart00591 | 107 | smart00591, RWD, domain in RING finger and WD repe | 2e-11 | |
| cd06615 | 308 | cd06615, PKc_MEK, Catalytic domain of the dual-spe | 2e-11 | |
| PLN00181 | 793 | PLN00181, PLN00181, protein SPA1-RELATED; Provisio | 2e-11 | |
| cd07831 | 282 | cd07831, STKc_MOK, Catalytic domain of the Serine/ | 3e-11 | |
| cd05608 | 280 | cd05608, STKc_GRK1, Catalytic domain of the Protei | 3e-11 | |
| cd00859 | 91 | cd00859, HisRS_anticodon, HisRS Histidyl-anticodon | 4e-11 | |
| cd05627 | 360 | cd05627, STKc_NDR2, Catalytic domain of the Protei | 5e-11 | |
| cd05601 | 330 | cd05601, STKc_CRIK, Catalytic domain of the Protei | 5e-11 | |
| cd06645 | 267 | cd06645, STKc_MAP4K3, Catalytic domain of the Prot | 5e-11 | |
| cd05605 | 285 | cd05605, STKc_GRK4_like, Catalytic domain of G pro | 5e-11 | |
| cd06633 | 313 | cd06633, STKc_TAO3, Catalytic domain of the Protei | 5e-11 | |
| cd06658 | 292 | cd06658, STKc_PAK5, Catalytic domain of the Protei | 6e-11 | |
| cd05039 | 256 | cd05039, PTKc_Csk_like, Catalytic domain of C-term | 6e-11 | |
| cd05633 | 279 | cd05633, STKc_GRK3, Catalytic domain of the Protei | 6e-11 | |
| cd05040 | 257 | cd05040, PTKc_Ack_like, Catalytic domain of the Pr | 7e-11 | |
| cd05624 | 331 | cd05624, STKc_MRCK_beta, Catalytic domain of the P | 1e-10 | |
| cd05597 | 331 | cd05597, STKc_DMPK_like, Catalytic domain of Myoto | 1e-10 | |
| cd05609 | 305 | cd05609, STKc_MAST, Catalytic domain of the Protei | 1e-10 | |
| cd06646 | 267 | cd06646, STKc_MAP4K5, Catalytic domain of the Prot | 1e-10 | |
| pfam05773 | 113 | pfam05773, RWD, RWD domain | 1e-10 | |
| cd05606 | 278 | cd05606, STKc_beta_ARK, Catalytic domain of the Pr | 1e-10 | |
| PHA03207 | 392 | PHA03207, PHA03207, serine/threonine kinase US3; P | 2e-10 | |
| cd06648 | 285 | cd06648, STKc_PAK_II, Catalytic domain of the Prot | 3e-10 | |
| cd05610 | 669 | cd05610, STKc_MASTL, Catalytic domain of the Prote | 4e-10 | |
| cd06657 | 292 | cd06657, STKc_PAK4, Catalytic domain of the Protei | 4e-10 | |
| cd05596 | 370 | cd05596, STKc_ROCK, Catalytic domain of the Protei | 4e-10 | |
| cd05621 | 370 | cd05621, STKc_ROCK2, Catalytic domain of the Prote | 4e-10 | |
| cd05631 | 285 | cd05631, STKc_GRK4, Catalytic domain of the Protei | 8e-10 | |
| cd05619 | 316 | cd05619, STKc_nPKC_theta, Catalytic domain of the | 9e-10 | |
| cd07863 | 288 | cd07863, STKc_CDK4, Catalytic domain of the Serine | 9e-10 | |
| cd05620 | 316 | cd05620, STKc_nPKC_delta, Catalytic domain of the | 1e-09 | |
| cd05587 | 324 | cd05587, STKc_cPKC, Catalytic domain of the Protei | 1e-09 | |
| cd06637 | 272 | cd06637, STKc_TNIK, Catalytic domain of the Protei | 1e-09 | |
| cd06649 | 331 | cd06649, PKc_MEK2, Catalytic domain of the dual-sp | 1e-09 | |
| cd05598 | 376 | cd05598, STKc_LATS, Catalytic domain of the Protei | 2e-09 | |
| cd05059 | 256 | cd05059, PTKc_Tec_like, Catalytic domain of Tec-li | 2e-09 | |
| cd05622 | 371 | cd05622, STKc_ROCK1, Catalytic domain of the Prote | 3e-09 | |
| cd07870 | 291 | cd07870, STKc_PFTAIRE2, Catalytic domain of the Se | 3e-09 | |
| cd07862 | 290 | cd07862, STKc_CDK6, Catalytic domain of the Serine | 3e-09 | |
| PHA03212 | 391 | PHA03212, PHA03212, serine/threonine kinase US3; P | 4e-09 | |
| cd06643 | 282 | cd06643, STKc_SLK, Catalytic domain of the Protein | 4e-09 | |
| PHA03211 | 461 | PHA03211, PHA03211, serine/threonine kinase US3; P | 4e-09 | |
| PTZ00036 | 440 | PTZ00036, PTZ00036, glycogen synthase kinase; Prov | 5e-09 | |
| cd05613 | 290 | cd05613, STKc_MSK1_N, N-terminal catalytic domain | 5e-09 | |
| cd05079 | 284 | cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma | 6e-09 | |
| cd05604 | 325 | cd05604, STKc_SGK3, Catalytic domain of the Protei | 7e-09 | |
| cd06636 | 282 | cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr | 8e-09 | |
| cd05625 | 382 | cd05625, STKc_LATS1, Catalytic domain of the Prote | 8e-09 | |
| cd06650 | 333 | cd06650, PKc_MEK1, Catalytic domain of the dual-sp | 8e-09 | |
| cd05591 | 321 | cd05591, STKc_nPKC_epsilon, Catalytic domain of th | 1e-08 | |
| cd06619 | 279 | cd06619, PKc_MKK5, Catalytic domain of the dual-sp | 1e-08 | |
| cd06647 | 293 | cd06647, STKc_PAK_I, Catalytic domain of the Prote | 1e-08 | |
| cd05590 | 320 | cd05590, STKc_nPKC_eta, Catalytic domain of the Pr | 2e-08 | |
| cd05602 | 325 | cd05602, STKc_SGK1, Catalytic domain of the Protei | 3e-08 | |
| cd08216 | 314 | cd08216, PK_STRAD, Pseudokinase domain of STE20-re | 3e-08 | |
| cd05034 | 261 | cd05034, PTKc_Src_like, Catalytic domain of Src ki | 3e-08 | |
| cd05110 | 303 | cd05110, PTKc_HER4, Catalytic domain of the Protei | 4e-08 | |
| cd05623 | 332 | cd05623, STKc_MRCK_alpha, Catalytic domain of the | 4e-08 | |
| cd05148 | 261 | cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro | 5e-08 | |
| cd05626 | 381 | cd05626, STKc_LATS2, Catalytic domain of the Prote | 6e-08 | |
| cd05065 | 269 | cd05065, PTKc_EphR_B, Catalytic domain of the Prot | 8e-08 | |
| cd05068 | 261 | cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re | 8e-08 | |
| cd07868 | 317 | cd07868, STKc_CDK8, Catalytic domain of the Serine | 9e-08 | |
| cd05589 | 324 | cd05589, STKc_PKN, Catalytic domain of the Protein | 1e-07 | |
| cd05094 | 291 | cd05094, PTKc_TrkC, Catalytic domain of the Protei | 1e-07 | |
| pfam13393 | 308 | pfam13393, tRNA-synt_His, Histidyl-tRNA synthetase | 1e-07 | |
| PRK12292 | 391 | PRK12292, hisZ, ATP phosphoribosyltransferase regu | 1e-07 | |
| cd05052 | 263 | cd05052, PTKc_Abl, Catalytic domain of the Protein | 2e-07 | |
| cd05615 | 323 | cd05615, STKc_cPKC_alpha, Catalytic domain of the | 2e-07 | |
| cd05067 | 260 | cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro | 2e-07 | |
| cd05066 | 267 | cd05066, PTKc_EphR_A, Catalytic domain of the Prot | 2e-07 | |
| cd07867 | 317 | cd07867, STKc_CDC2L6, Catalytic domain of Serine/T | 2e-07 | |
| cd05042 | 269 | cd05042, PTKc_Aatyk, Catalytic domain of the Prote | 3e-07 | |
| COG3705 | 390 | COG3705, HisZ, ATP phosphoribosyltransferase invol | 4e-07 | |
| TIGR03724 | 199 | TIGR03724, arch_bud32, Kae1-associated kinase Bud3 | 5e-07 | |
| PRK14879 | 211 | PRK14879, PRK14879, serine/threonine protein kinas | 5e-07 | |
| cd05575 | 323 | cd05575, STKc_SGK, Catalytic domain of the Protein | 7e-07 | |
| cd07866 | 311 | cd07866, STKc_BUR1, Catalytic domain of the Serine | 8e-07 | |
| cd05607 | 277 | cd05607, STKc_GRK7, Catalytic domain of the Protei | 8e-07 | |
| cd05616 | 323 | cd05616, STKc_cPKC_beta, Catalytic domain of the P | 8e-07 | |
| PHA03390 | 267 | PHA03390, pk1, serine/threonine-protein kinase 1; | 9e-07 | |
| cd05093 | 288 | cd05093, PTKc_TrkB, Catalytic domain of the Protei | 1e-06 | |
| cd05585 | 312 | cd05585, STKc_YPK1_like, Catalytic domain of Yeast | 1e-06 | |
| cd05072 | 261 | cd05072, PTKc_Lyn, Catalytic domain of the Protein | 2e-06 | |
| cd06622 | 286 | cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of | 2e-06 | |
| cd05109 | 279 | cd05109, PTKc_HER2, Catalytic domain of the Protei | 2e-06 | |
| cd05576 | 237 | cd05576, STKc_RPK118_like, Catalytic domain of the | 2e-06 | |
| TIGR00443 | 313 | TIGR00443, hisZ_biosyn_reg, ATP phosphoribosyltran | 3e-06 | |
| cd05084 | 252 | cd05084, PTKc_Fes, Catalytic domain of the Protein | 3e-06 | |
| cd05588 | 329 | cd05588, STKc_aPKC, Catalytic domain of the Protei | 3e-06 | |
| cd05114 | 256 | cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro | 3e-06 | |
| cd06655 | 296 | cd06655, STKc_PAK2, Catalytic domain of the Protei | 4e-06 | |
| cd05092 | 280 | cd05092, PTKc_TrkA, Catalytic domain of the Protei | 5e-06 | |
| cd05060 | 257 | cd05060, PTKc_Syk_like, Catalytic domain of Spleen | 5e-06 | |
| cd05595 | 323 | cd05595, STKc_PKB_beta, Catalytic domain of the Pr | 5e-06 | |
| cd05112 | 256 | cd05112, PTKc_Itk, Catalytic domain of the Protein | 6e-06 | |
| PLN03225 | 566 | PLN03225, PLN03225, Serine/threonine-protein kinas | 6e-06 | |
| cd05069 | 260 | cd05069, PTKc_Yes, Catalytic domain of the Protein | 6e-06 | |
| cd05073 | 260 | cd05073, PTKc_Hck, Catalytic domain of the Protein | 6e-06 | |
| cd05057 | 279 | cd05057, PTKc_EGFR_like, Catalytic domain of Epide | 7e-06 | |
| cd05113 | 256 | cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro | 7e-06 | |
| cd05033 | 266 | cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec | 7e-06 | |
| cd05049 | 280 | cd05049, PTKc_Trk, Catalytic domain of the Protein | 8e-06 | |
| cd06654 | 296 | cd06654, STKc_PAK1, Catalytic domain of the Protei | 9e-06 | |
| cd05082 | 256 | cd05082, PTKc_Csk, Catalytic domain of the Protein | 1e-05 | |
| cd05063 | 268 | cd05063, PTKc_EphR_A2, Catalytic domain of the Pro | 1e-05 | |
| cd06656 | 297 | cd06656, STKc_PAK3, Catalytic domain of the Protei | 1e-05 | |
| COG3642 | 204 | COG3642, COG3642, Mn2+-dependent serine/threonine | 1e-05 | |
| cd05618 | 329 | cd05618, STKc_aPKC_iota, Catalytic domain of the P | 2e-05 | |
| cd05571 | 323 | cd05571, STKc_PKB, Catalytic domain of the Protein | 2e-05 | |
| cd05617 | 327 | cd05617, STKc_aPKC_zeta, Catalytic domain of the P | 2e-05 | |
| cd05070 | 260 | cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Pro | 4e-05 | |
| cd05045 | 290 | cd05045, PTKc_RET, Catalytic domain of the Protein | 6e-05 | |
| cd05071 | 262 | cd05071, PTKc_Src, Catalytic domain of the Protein | 7e-05 | |
| cd05116 | 257 | cd05116, PTKc_Syk, Catalytic domain of the Protein | 8e-05 | |
| PHA03210 | 501 | PHA03210, PHA03210, serine/threonine kinase US3; P | 9e-05 | |
| cd05594 | 325 | cd05594, STKc_PKB_alpha, Catalytic domain of the P | 9e-05 | |
| PRK09605 | 535 | PRK09605, PRK09605, bifunctional UGMP family prote | 1e-04 | |
| cd05085 | 250 | cd05085, PTKc_Fer, Catalytic domain of the Protein | 1e-04 | |
| PTZ00426 | 340 | PTZ00426, PTZ00426, cAMP-dependent protein kinase | 1e-04 | |
| cd05046 | 275 | cd05046, PTK_CCK4, Pseudokinase domain of the Prot | 1e-04 | |
| cd05051 | 296 | cd05051, PTKc_DDR, Catalytic domain of the Protein | 1e-04 | |
| cd05108 | 316 | cd05108, PTKc_EGFR, Catalytic domain of the Protei | 1e-04 | |
| cd05096 | 304 | cd05096, PTKc_DDR1, Catalytic domain of the Protei | 1e-04 | |
| cd05593 | 328 | cd05593, STKc_PKB_gamma, Catalytic domain of the P | 2e-04 | |
| cd05115 | 257 | cd05115, PTKc_Zap-70, Catalytic domain of the Prot | 2e-04 | |
| cd05056 | 270 | cd05056, PTKc_FAK, Catalytic domain of the Protein | 2e-04 | |
| cd05083 | 254 | cd05083, PTKc_Chk, Catalytic domain of the Protein | 3e-04 | |
| pfam03129 | 93 | pfam03129, HGTP_anticodon, Anticodon binding domai | 3e-04 | |
| PHA02882 | 294 | PHA02882, PHA02882, putative serine/threonine kina | 4e-04 | |
| PLN03224 | 507 | PLN03224, PLN03224, probable serine/threonine prot | 4e-04 | |
| cd05120 | 155 | cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphot | 5e-04 | |
| PRK12420 | 423 | PRK12420, PRK12420, histidyl-tRNA synthetase; Prov | 6e-04 | |
| cd05100 | 334 | cd05100, PTKc_FGFR3, Catalytic domain of the Prote | 7e-04 | |
| cd05041 | 251 | cd05041, PTKc_Fes_like, Catalytic domain of Fes-li | 7e-04 | |
| cd05101 | 304 | cd05101, PTKc_FGFR2, Catalytic domain of the Prote | 0.001 | |
| cd05055 | 302 | cd05055, PTKc_PDGFR, Catalytic domain of the Prote | 0.001 | |
| cd05106 | 374 | cd05106, PTKc_CSF-1R, Catalytic domain of the Prot | 0.001 | |
| cd05050 | 288 | cd05050, PTKc_Musk, Catalytic domain of the Protei | 0.002 | |
| cd05098 | 307 | cd05098, PTKc_FGFR1, Catalytic domain of the Prote | 0.002 | |
| cd05086 | 268 | cd05086, PTKc_Aatyk2, Catalytic domain of the Prot | 0.002 | |
| cd05032 | 277 | cd05032, PTKc_InsR_like, Catalytic domain of Insul | 0.002 | |
| cd05087 | 269 | cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t | 0.004 | |
| cd05099 | 314 | cd05099, PTKc_FGFR4, Catalytic domain of the Prote | 0.004 | |
| COG4248 | 637 | COG4248, COG4248, Uncharacterized protein with pro | 0.004 |
| >gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Score = 222 bits (567), Expect = 1e-65
Identities = 87/309 (28%), Positives = 131/309 (42%), Gaps = 63/309 (20%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+E L+ LG G FG V L ++K G+ A+K I+ K K +RILRE+ L +L+H ++
Sbjct: 1 YEILEKLGEGSFGKVYLARDKKTGKLVAIKVIK-KKKIKKDRERILREIKILKKLKHPNI 59
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
VR Y FE LY+ MEYC
Sbjct: 60 VRLY-DVFED---------------------------------------EDKLYLVMEYC 79
Query: 477 P-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
L + + ++ A RQI+ L ++H +GI+HRDL P NI D +K+
Sbjct: 80 EGGDLFDLLKKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLDEDGHVKLA 139
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFGLA+ L + T VGT Y APE+ G + D++SL
Sbjct: 140 DFGLARQLDPGEKL----------------TTFVGTPEYMAPEVLLG-KGYGKAVDIWSL 182
Query: 596 GIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 651
G++ +EL PF + + + + P S + + L+R+L+ P R
Sbjct: 183 GVILYELLTGKPPFPGDDQLLELFKKIGKPKPPFPPPEWDISPEAKDLIRKLLVKDPEKR 242
Query: 652 PSATELLQD 660
+A E LQ
Sbjct: 243 LTAEEALQH 251
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254 |
| >gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain | Back alignment and domain information |
|---|
Score = 203 bits (519), Expect = 4e-59
Identities = 91/312 (29%), Positives = 128/312 (41%), Gaps = 63/312 (20%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+E L+ LG G FG V K+K G+ AVK ++ + + + RE+ L RL H ++
Sbjct: 1 YELLRKLGSGSFGTVYKAKHKGTGKIVAVKILKKRSEKSKKDQTARREIRILRRLSHPNI 60
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
VR FE +LY+ MEYC
Sbjct: 61 VRLI-DAFED---------------------------------------KDHLYLVMEYC 80
Query: 477 PRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
L ++ A + QI+ GL ++H GIIHRDL P NI D +KI
Sbjct: 81 EGGDLFDYLSRGGPLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLDENGVVKIA 140
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFGLAK L S T VGT +Y APE+ G K D++SL
Sbjct: 141 DFGLAKKL---------------LKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSL 185
Query: 596 GIVFFEL---WHPFSTA-MERQIVLSDLKQKGELPPSWVAKFSEQE---SLLRRLMSPSP 648
G++ +EL PFS + Q+ L L S E L+++ ++ P
Sbjct: 186 GVILYELLTGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDP 245
Query: 649 SDRPSATELLQD 660
S RP+A E+LQ
Sbjct: 246 SKRPTAEEILQH 257
|
Length = 260 |
| >gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Score = 195 bits (497), Expect = 1e-56
Identities = 82/301 (27%), Positives = 128/301 (42%), Gaps = 90/301 (29%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
LG GGFG V L ++K G+ A+K I+ +D S + +LRE+ L +L H ++V+ Y
Sbjct: 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLE-ELLREIEILKKLNHPNIVKLYGV 59
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR 481
+ + +LY+ MEYC +L+
Sbjct: 60 FEDEN----------------------------------------HLYLVMEYCEGGSLK 79
Query: 482 QVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-IKIGDFGL 539
+ + + ++ + QI+EGL ++H GIIHRDL P NI D+ N +K+ DFGL
Sbjct: 80 DLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGL 139
Query: 540 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 599
+K L VGT Y APE+ G EK+D++SLG++
Sbjct: 140 SKLL---------------TSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184
Query: 600 FELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
+EL +LK L+R+++ P RPSA E+L+
Sbjct: 185 YEL--------------PELKD-----------------LIRKMLQKDPEKRPSAKEILE 213
Query: 660 D 660
Sbjct: 214 H 214
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215 |
| >gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Score = 187 bits (478), Expect = 1e-53
Identities = 85/314 (27%), Positives = 134/314 (42%), Gaps = 70/314 (22%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
+E ++ +G G FG V L + K DG+ Y +K+I L + S + L EV L +L H +
Sbjct: 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPN 60
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+++YY E+ E L I MEY
Sbjct: 61 IIKYY----------------------------------------ESFEEKGKLCIVMEY 80
Query: 476 CPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
L Q + F +E F Q+ L ++H + I+HRD+ P NIF +
Sbjct: 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNG 140
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
+K+GDFG++K L VGT +Y +PE+ Q P + K+
Sbjct: 141 LVKLGDFGISK-----VLSSTVDL----------AKTVVGTPYYLSPELCQNKP-YNYKS 184
Query: 591 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQ-ESLLRRLMS 645
D++SLG V +EL HPF ++ L LK + +P +S + +L+ L+
Sbjct: 185 DIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYPPIPSQ----YSSELRNLVSSLLQ 240
Query: 646 PSPSDRPSATELLQ 659
P +RPS ++LQ
Sbjct: 241 KDPEERPSIAQILQ 254
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258 |
| >gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Score = 168 bits (429), Expect = 6e-47
Identities = 91/307 (29%), Positives = 128/307 (41%), Gaps = 66/307 (21%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
LG G FG V L +K G AVK + L S + + RE+ LS LQH ++VRYY
Sbjct: 8 LGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYY-- 65
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLR 481
G E E L I +EY +L
Sbjct: 66 ------------------------------------GSERDEEKNTLNIFLEYVSGGSLS 89
Query: 482 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
+ + + + + RQI+EGLA++H GI+HRD+ NI D+ +K+ DFG AK
Sbjct: 90 SLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAK 149
Query: 542 FLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTAPE-IEQGWPKIDEKADMYSLGIVF 599
L + +GTG V GT ++ APE I + AD++SLG
Sbjct: 150 RLG--------------DIETGEGTGSVRGTPYWMAPEVIRGE--EYGRAADIWSLGCTV 193
Query: 600 FELW---HPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQ-ESLLRRLMSPSPSDRPS 653
E+ P+S L + GE P P SE+ + LR+ + P RP+
Sbjct: 194 IEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEH---LSEEAKDFLRKCLRRDPKKRPT 250
Query: 654 ATELLQD 660
A ELLQ
Sbjct: 251 ADELLQH 257
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260 |
| >gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Score = 147 bits (373), Expect = 1e-39
Identities = 83/311 (26%), Positives = 139/311 (44%), Gaps = 66/311 (21%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
DFE L +G G FG V K D R YA+K+I L + + + E L++L +
Sbjct: 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSY 60
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
++RYY+++ + G L I MEY
Sbjct: 61 IIRYYESFLDKGK----------------------------------------LNIVMEY 80
Query: 476 CPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
L ++ + ++ W F QI+ GLAH+H + I+HRD+ N+F DA +++
Sbjct: 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNV 140
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
KIGD G+AK L + VGT +Y +PE+ + P +EK+D+
Sbjct: 141 KIGDLGVAKLL---------------SDNTNFANTIVGTPYYLSPELCEDKP-YNEKSDV 184
Query: 593 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES-LLRRLMSPSP 648
++LG+V +E HPF + ++L + +G PP +S+Q + L+ + ++
Sbjct: 185 WALGVVLYECCTGKHPFDANNQGALILKII--RGVFPPV-SQMYSQQLAQLIDQCLTKDY 241
Query: 649 SDRPSATELLQ 659
RP +LL+
Sbjct: 242 RQRPDTFQLLR 252
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256 |
| >gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Score = 146 bits (371), Expect = 4e-39
Identities = 89/324 (27%), Positives = 142/324 (43%), Gaps = 81/324 (25%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL-----KDKSLPVNDRILREVATLSR 410
D+E L+ +G G FG V + K DG+ K+I K+K V+ EV L
Sbjct: 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVS-----EVNILRE 55
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
L+H ++VRYY +R+ + LY
Sbjct: 56 LKHPNIVRYYD------------------------RIIDRSNQT--------------LY 77
Query: 471 IQMEYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-----GQGIIHRDLT 520
I MEYC + +++ + + ++E W + Q++ L H G ++HRDL
Sbjct: 78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLK 137
Query: 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580
P NIF DA N++K+GDFGLAK L + T VGT +Y +PE
Sbjct: 138 PANIFLDANNNVKLGDFGLAKIL------GHDSSFAKT---------YVGTPYYMSPEQL 182
Query: 581 QGWPKIDEKADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ- 636
DEK+D++SLG + +E L PF+ Q+ L+ ++G+ ++S +
Sbjct: 183 NHMS-YDEKSDIWSLGCLIYELCALSPPFTAR--NQLQLASKIKEGKFRR-IPYRYSSEL 238
Query: 637 ESLLRRLMSPSPSDRPSATELLQD 660
+++ +++ P RPS ELLQ
Sbjct: 239 NEVIKSMLNVDPDKRPSTEELLQL 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265 |
| >gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 3e-36
Identities = 77/311 (24%), Positives = 138/311 (44%), Gaps = 68/311 (21%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
FE L+ +G GGFG V ++K G+ A+K I+L+ S ++I+ E+ L + +H +
Sbjct: 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLE--SKEKKEKIINEIQILKKCKHPN 58
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V+YY ++ D +W I ME+
Sbjct: 59 IVKYYGSYL-------KKDELW---------------------------------IVMEF 78
Query: 476 CPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
C +L+ + +S + + ++ +++++GL ++H GIIHRD+ NI + ++K
Sbjct: 79 CSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVK 138
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
+ DFGL+ L + VGT ++ APE+ G P D KAD++
Sbjct: 139 LIDFGLSAQLSDTKARNTM----------------VGTPYWMAPEVINGKP-YDYKADIW 181
Query: 594 SLGIVFFELW-----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
SLGI EL + M+ ++ G P + E + L++ + +P
Sbjct: 182 SLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSD--EFKDFLKKCLQKNP 239
Query: 649 SDRPSATELLQ 659
RP+A +LL+
Sbjct: 240 EKRPTAEQLLK 250
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253 |
| >gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 8e-35
Identities = 79/315 (25%), Positives = 137/315 (43%), Gaps = 68/315 (21%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
DF+ L+ LG G +G V K D + YA+K++ L S + + E+ L+ + H +
Sbjct: 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPN 60
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
++ Y +A+ L+ L I MEY
Sbjct: 61 IISYKEAF----------------------------------------LDGNKLCIVMEY 80
Query: 476 CP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
P + + + + ++ W +F Q++ GL +H Q I+HRDL NI A +
Sbjct: 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVAND 140
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
+KIGD G++K LK ++ A Q+GT Y APE+ +G P K+
Sbjct: 141 LVKIGDLGISKVLK-----KNMAKT------------QIGTPHYMAPEVWKGRP-YSYKS 182
Query: 591 DMYSLGIVFFELWHPFSTAMERQIVLSDLKQK---GELPPSWVAKFSEQESLLRRLMSPS 647
D++SLG + +E+ F+ E + + DL+ K G+ PP + ++ +R ++
Sbjct: 183 DIWSLGCLLYEM-ATFAPPFEAR-SMQDLRYKVQRGKYPPIPPIYSQDLQNFIRSMLQVK 240
Query: 648 PSDRPSATELLQDAL 662
P RP+ ++L
Sbjct: 241 PKLRPNCDKILASPA 255
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256 |
| >gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 133 bits (337), Expect = 2e-34
Identities = 83/336 (24%), Positives = 130/336 (38%), Gaps = 89/336 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL--KDKSLPVNDRILREVATLSRLQHQ 414
+E+L+ LG G +G V ++K G A+KKIRL +++ +P LRE++ L L+H
Sbjct: 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPST--ALREISLLKELKHP 58
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+ DV E KL Y+ E
Sbjct: 59 NIVKLL-----------------------------------DVIHTERKL-----YLVFE 78
Query: 475 YCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
YC L++ + L + Q++ GLA+ H I+HRDL P NI + +K
Sbjct: 79 YCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLK 138
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
+ DFGLA+ P T T +V T +Y APEI G D++
Sbjct: 139 LADFGLARAFG---------IPLRT------YTHEVVTLWYRAPEILLGSKHYSTAVDIW 183
Query: 594 SLGIVFFELW--HP-----------------FSTAMERQIV-LSDLKQKGELPPSWVAK- 632
S+G +F E+ P T E ++ L P + K
Sbjct: 184 SVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKD 243
Query: 633 ----FSEQES----LLRRLMSPSPSDRPSATELLQD 660
+ LL +++ +P+ R SA E L+
Sbjct: 244 LEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKH 279
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282 |
| >gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 1e-33
Identities = 84/296 (28%), Positives = 120/296 (40%), Gaps = 58/296 (19%)
Query: 366 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWF 424
G +G V L K K G YA+K I+ D D++L E LS+ Q +VV+ Y +
Sbjct: 4 GAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYS-- 61
Query: 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQV 483
F G LY+ MEY P L +
Sbjct: 62 ------FQGKK--------------------------------NLYLVMEYLPGGDLASL 83
Query: 484 FESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543
E+ D+++A +IV L ++H GIIHRDL P+NI D+ +K+ DFGL+K
Sbjct: 84 LENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVG 143
Query: 544 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFE 601
+ + + + VGT Y APE+ QG K D +SLG + +E
Sbjct: 144 LVRRQINLNDDEKEDKRI-------VGTPDYIAPEVILGQGHSK---TVDWWSLGCILYE 193
Query: 602 L---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654
PF +I + L K E P V E L+ +L+ P P R A
Sbjct: 194 FLVGIPPFHGETPEEIFQNILNGKIE-WPEDVEVSDEAIDLISKLLVPDPEKRLGA 248
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265 |
| >gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Score = 132 bits (332), Expect = 4e-33
Identities = 90/415 (21%), Positives = 143/415 (34%), Gaps = 74/415 (17%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND-RILREVATLSRLQHQ 414
+ L+ LG G FG V L +++ + A+K + K +S R LRE+ L+ L H
Sbjct: 1 SYRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHP 57
Query: 415 -HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V+ Y Q+ LY+ M
Sbjct: 58 PNIVKLYD------------------------------------FFQDEG----SLYLVM 77
Query: 474 EYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
EY +L + + + A + QI+ L ++H +GIIHRD+ P NI D
Sbjct: 78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRD 137
Query: 530 ND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKI 586
+K+ DFGLAK L T VGT Y APE+ G
Sbjct: 138 GRVVKLIDFGLAKLLPDPGSTSSIPALPST---------SVGTPGYMAPEVLLGLSLAYA 188
Query: 587 DEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVA----------KF 633
+D++SLGI +EL PF LK ELP +A
Sbjct: 189 SSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELIS 248
Query: 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSS 693
LL++L++ P +R S++ L L ++ + D + S
Sbjct: 249 KAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSLPPSL 308
Query: 694 IFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHL 748
+L+ +G+ D+ S + + + L
Sbjct: 309 EALISSLNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTASSKRSSL 363
|
Length = 384 |
| >gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Score = 127 bits (321), Expect = 1e-32
Identities = 86/314 (27%), Positives = 130/314 (41%), Gaps = 66/314 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ ++ LG G FG L + D K++ L S L E+ LS LQH ++
Sbjct: 2 YIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNI 61
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ YY + ++ L I+MEY
Sbjct: 62 IAYYNHF----------------------------------------MDDNTLLIEMEYA 81
Query: 477 PR-TLRQVFESYD--HFDKELA-WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
TL F++E+ W+LF QIV +++IH GI+HRD+ NIF I
Sbjct: 82 NGGTLYDKIVRQKGQLFEEEMVLWYLF-QIVSAVSYIHKAGILHRDIKTLNIFLTKAGLI 140
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
K+GDFG++K L E +V VGT +Y +PE+ QG K + K+D+
Sbjct: 141 KLGDFGISKILGSEYS----------MAETV-----VGTPYYMSPELCQG-VKYNFKSDI 184
Query: 593 YSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649
++LG V +E L F +V+ ++ G P SE SL+ L+ P
Sbjct: 185 WALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYTPVVSVYSSELISLVHSLLQQDPE 242
Query: 650 DRPSATELLQDALP 663
RP+A E+L L
Sbjct: 243 KRPTADEVLDQPLL 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256 |
| >gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Score = 126 bits (318), Expect = 3e-32
Identities = 94/309 (30%), Positives = 128/309 (41%), Gaps = 64/309 (20%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
+G G FG V N G AVK+IR++D I E+ L L+H ++V+YY
Sbjct: 8 IGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYY-- 65
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR 481
GV ++ +YI MEYC TL
Sbjct: 66 ----GV----------------------------------EVHREKVYIFMEYCSGGTLE 87
Query: 482 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
++ E D+ + Q++EGLA++H GI+HRD+ P NIF D IK+GDFG A
Sbjct: 88 ELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAV 147
Query: 542 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE--KADMYSLGIVF 599
LK T T G V GT Y APE+ G AD++SLG V
Sbjct: 148 KLKN---------NTTTMGEEVQSL--AGTPAYMAPEVITGGKGKGHGRAADIWSLGCVV 196
Query: 600 FEL------WHPFSTAMERQIVLS-DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652
E+ W E QI+ K +P S + E + L R + P RP
Sbjct: 197 LEMATGKRPWSELDN--EFQIMFHVGAGHKPPIPDS-LQLSPEGKDFLDRCLESDPKKRP 253
Query: 653 SATELLQDA 661
+A+ELLQ
Sbjct: 254 TASELLQHP 262
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264 |
| >gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 1e-31
Identities = 89/317 (28%), Positives = 139/317 (43%), Gaps = 74/317 (23%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+D E ++ LG G G V ++K G+ YA+KKI + ++LRE+ TL +
Sbjct: 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEE-FRKQLLRELKTLRSCESP 59
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+VV+ Y A+++ G + I +E
Sbjct: 60 YVVKCYGAFYKEG----------------------------------------EISIVLE 79
Query: 475 YCPR-TLRQVFESYDHF-DKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARND 531
Y +L + + + LA ++ RQI++GL ++H + IIHRD+ P+N+ +++ +
Sbjct: 80 YMDGGSLADLLKKVGKIPEPVLA-YIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGE 138
Query: 532 IKIGDFGLAKFLKLEQ-LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE-K 589
+KI DFG++K LE LDQ F VGT Y +PE QG +
Sbjct: 139 VKIADFGISKV--LENTLDQCNTF--------------VGTVTYMSPERIQG--ESYSYA 180
Query: 590 ADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQK--GELPPSWVAK-FSEQ-ESLLRR 642
AD++SLG+ E PF Q +L Q PPS A+ FS + +
Sbjct: 181 ADIWSLGLTLLECALGKFPFLPP--GQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISA 238
Query: 643 LMSPSPSDRPSATELLQ 659
+ P RPSA ELLQ
Sbjct: 239 CLQKDPKKRPSAAELLQ 255
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264 |
| >gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Score = 124 bits (313), Expect = 3e-31
Identities = 86/328 (26%), Positives = 131/328 (39%), Gaps = 77/328 (23%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRL----KDKSLPVNDRILREVAT 407
+DF+ + +G G F VVL K K + YA+K K +L K K + E
Sbjct: 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKY------VKIEKEV 54
Query: 408 LSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 466
L+RL H +++ Y TF + +EN
Sbjct: 55 LTRLNGHPGIIKLY------------------------YTFQD----------EEN---- 76
Query: 467 TYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525
LY +EY P L Q Y D++ +I+ L ++H +GIIHRDL P NI
Sbjct: 77 --LYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENIL 134
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ------VGTYFYTAPEI 579
D IKI DFG AK L + + T S + VGT Y +PE+
Sbjct: 135 LDKDMHIKITDFGTAKVLDPNSSPE-SNKGDATNIDSQIEKNRRRFASFVGTAEYVSPEL 193
Query: 580 --EQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSW--VAK 632
E+ + +D+++LG + +++ PF + E LK + PP++ AK
Sbjct: 194 LNEK---PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPPNFPPDAK 250
Query: 633 FSEQESLLRRLMSPSPSDRPSATELLQD 660
L+ +L+ P DR E +
Sbjct: 251 -----DLIEKLLVLDPQDRLGVNEGYDE 273
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280 |
| >gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 5e-31
Identities = 62/248 (25%), Positives = 99/248 (39%), Gaps = 55/248 (22%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
++ L +G G G V K++ G A+KK+ L+ + ++ LRE+ L QH +
Sbjct: 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPY 60
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
VV+ DV + + MEY
Sbjct: 61 VVKLL-----------------------------------DVF-----PHGSGFVLVMEY 80
Query: 476 CPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
P L +V + + R +++G+A++H GI+HRDL P N+ A +KI
Sbjct: 81 MPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKI 140
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594
DFGLA+ + QV T +Y APE+ G K D D+++
Sbjct: 141 ADFGLARLFS--------------EEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWA 186
Query: 595 LGIVFFEL 602
+G +F EL
Sbjct: 187 VGCIFAEL 194
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286 |
| >gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 6e-31
Identities = 87/319 (27%), Positives = 139/319 (43%), Gaps = 84/319 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ +++ +G G FG +L K+K DG+ Y +K+I + S + +EVA LS ++H ++
Sbjct: 2 YVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNI 61
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V+Y QE+ E+ LYI M+YC
Sbjct: 62 VQY----------------------------------------QESFEENGNLYIVMDYC 81
Query: 477 PRTLRQVFESYDHF-------------DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
E D + D+ L W F QI L H+H + I+HRD+ N
Sbjct: 82 --------EGGDLYKKINAQRGVLFPEDQILDW--FVQICLALKHVHDRKILHRDIKSQN 131
Query: 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583
IF IK+GDFG+A+ L V + T +GT +Y +PEI +
Sbjct: 132 IFLTKDGTIKLGDFGIARVL--------------NSTVELARTC-IGTPYYLSPEICENR 176
Query: 584 PKIDEKADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 640
P + K+D+++LG V +E L H F + +VL + +G PP + +L+
Sbjct: 177 P-YNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKII--RGSYPPVSSHYSYDLRNLV 233
Query: 641 RRLMSPSPSDRPSATELLQ 659
+L +P DRPS +L+
Sbjct: 234 SQLFKRNPRDRPSVNSILE 252
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256 |
| >gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 121 bits (307), Expect = 9e-31
Identities = 81/307 (26%), Positives = 125/307 (40%), Gaps = 74/307 (24%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
+G G FG V N G A+K+I L+ I++E+ L L+H ++V+Y +
Sbjct: 8 IGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGS 67
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLR 481
ET S LYI +EY +LR
Sbjct: 68 -IET---------------------------------------SDSLYIILEYAENGSLR 87
Query: 482 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
Q+ + + F + L Q+++GLA++H QG+IHRD+ NI +K+ DFG+A
Sbjct: 88 QIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVA- 146
Query: 542 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 601
T VS D VGT ++ APE+ + +D++SLG E
Sbjct: 147 --------------TKLNDVSKDDASVVGTPYWMAPEVIEMSG-ASTASDIWSLGCTVIE 191
Query: 602 LWH---PFST-----AMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRP 652
L P+ A+ R IV D LP S + + L + P+ RP
Sbjct: 192 LLTGNPPYYDLNPMAALFR-IVQDD---HPPLPEG----ISPELKDFLMQCFQKDPNLRP 243
Query: 653 SATELLQ 659
+A +LL+
Sbjct: 244 TAKQLLK 250
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254 |
| >gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 122 bits (308), Expect = 1e-30
Identities = 60/247 (24%), Positives = 98/247 (39%), Gaps = 56/247 (22%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+++L +G G +G V ++KL G A+KKI+L+ +S + LRE+ L L H ++
Sbjct: 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNI 60
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ DV + L Y+ E+
Sbjct: 61 I-----------------------------------KLLDVFRHKGDL-----YLVFEFM 80
Query: 477 PRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
L ++ + + L Q+++GLA H GI+HRDL P N+ + +K+
Sbjct: 81 DTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLA 140
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFGLA+ T V T +Y APE+ G D++S+
Sbjct: 141 DFGLAR-----SFGSPVRPYTH----------YVVTRWYRAPELLLGDKGYSTPVDIWSV 185
Query: 596 GIVFFEL 602
G +F EL
Sbjct: 186 GCIFAEL 192
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283 |
| >gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 123 bits (311), Expect = 1e-30
Identities = 81/337 (24%), Positives = 127/337 (37%), Gaps = 84/337 (24%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+E L+P+G G +G V +K GR A+KKI L RILRE+ L L+H+++
Sbjct: 2 YELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENI 61
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ G+ D + F+ DV YI E
Sbjct: 62 I---------GLLDILRPP-------SPEDFN-------DV------------YIVTELM 86
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L +V +S + + QI+ GL ++H +IHRDL P+NI ++ D+KI D
Sbjct: 87 ETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICD 146
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FGLA+ +D D T V T +Y APE+ + + D++S+G
Sbjct: 147 FGLAR-----GVDPDEDEKGFL-------TEYVVTRWYRAPELLLSSSRYTKAIDIWSVG 194
Query: 597 IVFFEL----------WH--------------------PFSTAMERQIVLSDLKQKGELP 626
+F EL + ++ R + S K+
Sbjct: 195 CIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKP---K 251
Query: 627 PSWVAKFSEQES----LLRRLMSPSPSDRPSATELLQ 659
F LL +++ P R +A E L
Sbjct: 252 KPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALA 288
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330 |
| >gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Score = 120 bits (304), Expect = 5e-30
Identities = 74/312 (23%), Positives = 130/312 (41%), Gaps = 70/312 (22%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
++ L+ +G G G V ++ G+ A+KK+RL+ ++ + I+ E+ + +H ++
Sbjct: 21 YKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNK---ELIINEILIMKDCKHPNI 77
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V YY ++ L L++ MEY
Sbjct: 78 VDYYDSY----------------------------------------LVGDELWVVMEYM 97
Query: 477 PR-TLRQVFESYDHFDKE--LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
+L + E +A+ + R++++GL ++H Q +IHRD+ +NI +K
Sbjct: 98 DGGSLTDIITQNFVRMNEPQIAY-VCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVK 156
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
+ DFG A L E+ + VGT ++ APE+ + K D++
Sbjct: 157 LADFGFAAQLTKEKSKR---------------NSVVGTPYWMAPEVIKRKD-YGPKVDIW 200
Query: 594 SLGIVFFELW--HP--FSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSP 648
SLGI+ E+ P R + L + KG P K+S + + L + + P
Sbjct: 201 SLGIMCIEMAEGEPPYLREPPLRALFL--ITTKGIPPLKNPEKWSPEFKDFLNKCLVKDP 258
Query: 649 SDRPSATELLQD 660
RPSA ELLQ
Sbjct: 259 EKRPSAEELLQH 270
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286 |
| >gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Score = 118 bits (296), Expect = 2e-29
Identities = 92/316 (29%), Positives = 137/316 (43%), Gaps = 77/316 (24%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+E ++ +G G FG + L K K D H +K+I L + + +EV L++++H ++
Sbjct: 2 YEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNI 61
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V ++ ++ E G L+I MEYC
Sbjct: 62 VTFFASFQENG----------------------------------------RLFIVMEYC 81
Query: 477 ------PRTLRQ---VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
R RQ +F D+ L+W F QI GL HIH + I+HRD+ NIF
Sbjct: 82 DGGDLMKRINRQRGVLFSE----DQILSW--FVQISLGLKHIHDRKILHRDIKSQNIFLS 135
Query: 528 ARNDI-KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586
+ K+GDFG+A+ QL+ VGT +Y +PEI Q P
Sbjct: 136 KNGMVAKLGDFGIAR-----QLNDSMELAYTC----------VGTPYYLSPEICQNRP-Y 179
Query: 587 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL 643
+ K D++SLG V +EL HPF Q+VL +G P + SL+ +L
Sbjct: 180 NNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKIC--QGYFAPISPNFSRDLRSLISQL 237
Query: 644 MSPSPSDRPSATELLQ 659
SP DRPS T +L+
Sbjct: 238 FKVSPRDRPSITSILK 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257 |
| >gnl|CDD|215525 PLN02972, PLN02972, Histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 124 bits (314), Expect = 4e-29
Identities = 120/453 (26%), Positives = 203/453 (44%), Gaps = 64/453 (14%)
Query: 728 LRDYVVQVTKEMFRQHCAKHLEIEPMY-----LLGDCPQFKRNTVKLLTHGGDLLELSHE 782
+R+ + +F++H A L+ P++ L+G + + L GG+L L ++
Sbjct: 343 IREKAFSIITSVFKRHGATALDT-PVFELRETLMGKYGEDSKLIYDLADQGGELCSLRYD 401
Query: 783 LRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNR-----YLQGDFDIIGGASAL-TE 836
L +PF R+ N +SFKRY+I+ VYRR P++ + Q DFDI G + +
Sbjct: 402 LTVPFARYVAMNGITSFKRYQIAKVYRR----DNPSKGRYREFYQCDFDIAGVYEPMGPD 457
Query: 837 AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQ 896
E++KV +++ ++ LNH LL+ + G+ EK + + + L Q
Sbjct: 458 FEIIKVLTELLDELDIGTY-EVKLNHRKLLDGMLEICGVPP---EKFRTICSSIDKLDKQ 513
Query: 897 SSEWKSKWVVIRRQLLQELNLAEAVVNRLQT-VGLRFCGAADQALPRLR---GALPADKP 952
S + +++++++E L+ +++ V R G + L +LR +
Sbjct: 514 S------FEQVKKEMVEEKGLSNETADKIGNFVKER--GPPLELLSKLRQEGSEFLGNAS 565
Query: 953 TRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTL----- 1007
+R ALDEL + +EK+ I ++ + S R L + Y + E
Sbjct: 566 SRAALDELEIMFKALEKSKAIGKIVFDL-SLARGL--------DYYTGVIYEAVFKGAQV 616
Query: 1008 --LAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALE---TIIQHYPVDFKPVRNE 1062
+A GGRYD L VG S P+ VG SL +E I++ + V
Sbjct: 617 GSIAAGGRYDNL---------VGMFSGKQVPA-VGVSLGIERVFAIMEQQEEEKSQVIRP 666
Query: 1063 AGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVI 1122
T VLV S G L ELV+ELW IKA++ + + A E I +V+
Sbjct: 667 TETEVLV-SIIGDDKLALAAELVSELWNAGIKAEY--KVSTRKAKHLKRAKESGIPWMVL 723
Query: 1123 LTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1155
+ + KG VK+++L+ E+EV R V+ L
Sbjct: 724 VGEKELSKGFVKLKNLEAGVEEEVDRTCFVQEL 756
|
Length = 763 |
| >gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 116 bits (293), Expect = 5e-29
Identities = 82/300 (27%), Positives = 117/300 (39%), Gaps = 66/300 (22%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN--DRILREVATLSRLQHQHVVRYY 420
LG G FG V+L + K G+ YA+K ++ K K + + L E LSR+ H +V+ +
Sbjct: 1 LGKGSFGKVLLVRKKDTGKLYAMKVLK-KKKIIKRKEVEHTLTERNILSRINHPFIVKLH 59
Query: 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 479
A F+T LY+ +EY P
Sbjct: 60 YA-FQT---------------------------------------EEKLYLVLEYAPGGE 79
Query: 480 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 539
L F +E A +IV L ++H GII+RDL P NI DA IK+ DFGL
Sbjct: 80 LFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGL 139
Query: 540 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 599
AK L T+T GT Y APE+ G + D +SLG++
Sbjct: 140 AKELS------SEGSRTNT---------FCGTPEYLAPEVLLGKG-YGKAVDWWSLGVLL 183
Query: 600 FEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656
+E+ PF ++I LK P E L+ L+ P+ R +
Sbjct: 184 YEMLTGKPPFYAEDRKEIYEKILKDPLRFPEFL---SPEARDLISGLLQKDPTKRLGSGG 240
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250 |
| >gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 115 bits (291), Expect = 3e-28
Identities = 79/337 (23%), Positives = 134/337 (39%), Gaps = 88/337 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRLQHQ 414
+E++ +G G +G V +NK G A+KKIR++++ P+ +RE+ L +L+H
Sbjct: 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPIT--AIREIKLLQKLRHP 58
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++VR E + G +Y+ E
Sbjct: 59 NIVRLK----EIVTSKGKGS----------------------------------IYMVFE 80
Query: 475 YCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
Y L + +S + F + +Q++EGL ++H GI+HRD+ +NI + +K
Sbjct: 81 YMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLK 140
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
+ DFGLA+ S D T +V T +Y PE+ G + + DM+
Sbjct: 141 LADFGLARPYTKRN--------------SADYTNRVITLWYRPPELLLGATRYGPEVDMW 186
Query: 594 SLGIVFFELWH-----PFSTAME--RQIV-------------LSDLKQKGEL--PPSWVA 631
S+G + EL+ ST +E +I +S L L +
Sbjct: 187 SVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKR 246
Query: 632 KFSEQES---------LLRRLMSPSPSDRPSATELLQ 659
+ E LL +L++ P R SA + LQ
Sbjct: 247 RLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287 |
| >gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 6e-28
Identities = 84/348 (24%), Positives = 128/348 (36%), Gaps = 107/348 (30%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
N +E L +G G +G V+ C+NK G A+KK + + V LREV L +L+H+
Sbjct: 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHE 60
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V +A+ R LY+ E
Sbjct: 61 NIVNLKEAF------------RR----------KGR------------------LYLVFE 80
Query: 475 YCPRTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
Y RTL ++ E+ + W Q+++ +A+ H IIHRD+ P NI
Sbjct: 81 YVERTLLELLEASPGGLPPDAVRSYIW----QLLQAIAYCHSHNIIHRDIKPENILVSES 136
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
+K+ DFG A+ L + T V T +Y APE+ G +
Sbjct: 137 GVLKLCDFGFARAL--------------RARPASPLTDYVATRWYRAPELLVGDTNYGKP 182
Query: 590 ADMYSLGIVFFELWHPFSTAMERQIV--LSDLKQ-------KGELPPSWVAKFS------ 634
D++++G + EL + SD+ Q G LPPS FS
Sbjct: 183 VDVWAIGCIMAEL------LDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFA 236
Query: 635 --------EQESLLRR---------------LMSPSPSDRPSATELLQ 659
+ ESL RR + P +R + ELLQ
Sbjct: 237 GVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288 |
| >gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Score = 112 bits (282), Expect = 2e-27
Identities = 79/320 (24%), Positives = 133/320 (41%), Gaps = 70/320 (21%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQ 412
L +F+ + +G G F V LDGR A+KK+++ + L+E+ L +L
Sbjct: 1 LGNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLD 60
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +V++Y ++ E N+L I
Sbjct: 61 HPNVIKYLASFIE-----------------------------------NNELN-----IV 80
Query: 473 MEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
+E R ++ + + W F Q+ L H+H + I+HRD+ P N+F
Sbjct: 81 LELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT 140
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPK 585
A +K+GD GL +F + AA VGT +Y +PE E G+
Sbjct: 141 ATGVVKLGDLGLGRFFSSKTT---AAH------------SLVGTPYYMSPERIHENGY-- 183
Query: 586 IDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQK---GELPPSWVAKFSEQ-ESLLR 641
+ K+D++SLG + +E+ S ++ L L +K + PP +SE+ L+
Sbjct: 184 -NFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCDYPPLPADHYSEELRDLVS 242
Query: 642 RLMSPSPSDRPSATELLQDA 661
R ++P P RP + +LQ A
Sbjct: 243 RCINPDPEKRPDISYVLQVA 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 111 bits (280), Expect = 3e-27
Identities = 80/311 (25%), Positives = 129/311 (41%), Gaps = 74/311 (23%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVV 417
+ LG G FG V N DG +AVK++ L D ++ +E+A LS+LQH ++V
Sbjct: 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIV 65
Query: 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 477
+Y GT + E LYI +E P
Sbjct: 66 QYL-------------------GT---------------------EREEDNLYIFLELVP 85
Query: 478 R-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
+L ++ + Y F + + RQI+ GL ++H + +HRD+ NI D +K+ D
Sbjct: 86 GGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLAD 145
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-----EQGWPKIDEKAD 591
FG+AK ++ + +F G+ ++ APE+ G AD
Sbjct: 146 FGMAK--QVVEFSFAKSF--------------KGSPYWMAPEVIAQQGGYGLA-----AD 184
Query: 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
++SLG E+ P+S V + + ELPP E + + + + P
Sbjct: 185 IWSLGCTVLEMATGKPPWSQLEGVAAVFK-IGRSKELPPIPDHLSDEAKDFILKCLQRDP 243
Query: 649 SDRPSATELLQ 659
S RP+A ELL+
Sbjct: 244 SLRPTAAELLE 254
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258 |
| >gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Score = 111 bits (278), Expect = 4e-27
Identities = 83/311 (26%), Positives = 135/311 (43%), Gaps = 69/311 (22%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
+ L+ +G G FG +L ++ + YA+K+IRL S V D +E L++++H +
Sbjct: 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDS-RKEAVLLAKMKHPN 59
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V + ++ F+ D +LYI MEY
Sbjct: 60 IVAFKES--------FEADG--------------------------------HLYIVMEY 79
Query: 476 CP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
C + ++ D L W F Q+ G+ HIH + ++HRD+ NIF
Sbjct: 80 CDGGDLMQKIKLQRGKLFPEDTILQW--FVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNG 137
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
+K+GDFG A+ L T + T VGT +Y PEI + P + K+
Sbjct: 138 KVKLGDFGSARLL--------------TSPGAYACT-YVGTPYYVPPEIWENMP-YNNKS 181
Query: 591 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647
D++SLG + +EL HPF + ++L +G P E SL++++ +
Sbjct: 182 DIWSLGCILYELCTLKHPFQANSWKNLILKVC--QGSYKPLPSHYSYELRSLIKQMFKRN 239
Query: 648 PSDRPSATELL 658
P RPSAT +L
Sbjct: 240 PRSRPSATTIL 250
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255 |
| >gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 109 bits (274), Expect = 2e-26
Identities = 91/307 (29%), Positives = 136/307 (44%), Gaps = 63/307 (20%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR-------ILREVATLSRLQHQH 415
+G G FG V L N G AVK++ L S DR + RE+A L LQH++
Sbjct: 8 IGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHEN 67
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V+Y L SS L++ +L I +EY
Sbjct: 68 IVQY----------------------LGSS------------------LDADHLNIFLEY 87
Query: 476 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
P ++ + +Y F++ L + RQI++GL ++H +GIIHRD+ NI D + IKI
Sbjct: 88 VPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKI 147
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594
DFG++K L+ L T T G G V F+ APE+ + KAD++S
Sbjct: 148 SDFGISKKLEANSLS------TKTNGARPSLQGSV---FWMAPEVVKQ-TSYTRKADIWS 197
Query: 595 LGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
LG + E+ HPF + Q + + PS ++ SE L + + R
Sbjct: 198 LGCLVVEMLTGKHPFPDCTQLQAIFKIGENASPEIPSNIS--SEAIDFLEKTFEIDHNKR 255
Query: 652 PSATELL 658
P+A ELL
Sbjct: 256 PTAAELL 262
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267 |
| >gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 109 bits (275), Expect = 2e-26
Identities = 86/322 (26%), Positives = 132/322 (40%), Gaps = 89/322 (27%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
F L+ +G G FG V +K + A+K I L++ + D I +E+ LS+ +
Sbjct: 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIED-IQQEIQFLSQCRSP 59
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++ +YY GS F L+ + L+I ME
Sbjct: 60 YITKYY-----------------GS-------F----------------LKGSKLWIIME 79
Query: 475 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
YC + + + D+ + R+++ GL ++H +G IHRD+ NI D+K
Sbjct: 80 YCGGGSCLDLLKPGK-LDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVK 138
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 592
+ DFG++ L ++ F VGT F+ APE I+Q DEKAD+
Sbjct: 139 LADFGVSGQLTSTMSKRN-TF--------------VGTPFWMAPEVIKQS--GYDEKADI 181
Query: 593 YSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQ-----E 637
+SLGI EL HP M ++ PPS KFS+
Sbjct: 182 WSLGITAIELAKGEPPLSDLHP----MRVLFLIPKNN-----PPSLEGNKFSKPFKDFVS 232
Query: 638 SLLRRLMSPSPSDRPSATELLQ 659
L + P +RPSA ELL+
Sbjct: 233 LCLNK----DPKERPSAKELLK 250
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274 |
| >gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 3e-26
Identities = 82/316 (25%), Positives = 129/316 (40%), Gaps = 75/316 (23%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKI--------RLKDKSLPVNDRILREVATLSRLQHQ 414
+G G +G V L N G AVK++ R + + + E+ TL L H
Sbjct: 9 IGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHL 68
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+Y G E E YL I +E
Sbjct: 69 NIVQYL--------------------------------------GFETTEE--YLSIFLE 88
Query: 475 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
Y P ++ +Y F+++L Q++EGLA++H +GI+HRDL +N+ DA K
Sbjct: 89 YVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICK 148
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDEK 589
I DFG++K +D + G+ F+ APE+ QG+ K
Sbjct: 149 ISDFGISK-------------KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGY---SAK 192
Query: 590 ADMYSLGIVFFELW---HPFST--AMERQIVLSDLKQKGELPPSWVAKFS-EQESLLRRL 643
D++SLG V E++ P+S A+ L + + +PP S L
Sbjct: 193 VDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNAC 252
Query: 644 MSPSPSDRPSATELLQ 659
+ +P +RP+A ELLQ
Sbjct: 253 FTINPDNRPTARELLQ 268
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272 |
| >gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Score = 108 bits (272), Expect = 3e-26
Identities = 80/315 (25%), Positives = 131/315 (41%), Gaps = 70/315 (22%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+E+++ +G G FG V LC+ K D + +K+I ++ + E L L H ++
Sbjct: 2 YEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNI 61
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ YY EN LE L I MEY
Sbjct: 62 IEYY----------------------------------------ENFLEDKALMIVMEYA 81
Query: 477 P-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
P +++ S D++ H F QI+ L H+H + I+HRDL NI D
Sbjct: 82 PGGTLAEYIQKRCNSL--LDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKM 139
Query: 532 I-KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
+ KIGDFG++K L + A+ VGT Y +PE+ +G P ++K+
Sbjct: 140 VVKIGDFGISKILS----SKSKAYTV------------VGTPCYISPELCEGKP-YNQKS 182
Query: 591 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647
D+++LG V +EL F A +VL + G P + L+ +++
Sbjct: 183 DIWALGCVLYELASLKRAFEAANLPALVLKIM--SGTFAPISDRYSPDLRQLILSMLNLD 240
Query: 648 PSDRPSATELLQDAL 662
PS RP ++++ +
Sbjct: 241 PSKRPQLSQIMAQPI 255
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256 |
| >gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 108 bits (273), Expect = 4e-26
Identities = 83/306 (27%), Positives = 123/306 (40%), Gaps = 85/306 (27%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR----ILREVATLSRLQHQHVVR 418
LG GGFG V L K K R +A+K ++ K V I E L H +V+
Sbjct: 1 LGVGGFGRVELVKVKSKNRTFALKCVK---KRHIVETGQQEHIFSEKEILEECNHPFIVK 57
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 477
Y+ TF ++ Y+Y+ MEYC
Sbjct: 58 LYR------------------------TFKDKK----------------YIYMLMEYCLG 77
Query: 478 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 537
L + FD+ A +V ++H +GII+RDL P N+ D+ +K+ DF
Sbjct: 78 GELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDF 137
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ-----VGTYFYTAPEIEQGWPK-IDEKAD 591
G AK LK +GQ GT Y APEI K D D
Sbjct: 138 GFAKKLK---------------------SGQKTWTFCGTPEYVAPEIILN--KGYDFSVD 174
Query: 592 MYSLGIVFFELWH---PFSTAMERQIVLSD--LKQKGELP-PSWVAKFSEQESLLRRLMS 645
+SLGI+ +EL PF E + + + LK G+L P+++ K + L+++L+
Sbjct: 175 YWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEFPNYIDK--AAKDLIKQLLR 232
Query: 646 PSPSDR 651
+P +R
Sbjct: 233 RNPEER 238
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262 |
| >gnl|CDD|223202 COG0124, HisS, Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Score = 110 bits (277), Expect = 2e-25
Identities = 100/456 (21%), Positives = 164/456 (35%), Gaps = 71/456 (15%)
Query: 725 DTELRDYVVQVTKEMFRQHCAK-----HLEIEPMYLLGDCPQFKRNTVKLL----THGGD 775
D LR+Y+ +++F + E ++ + K + GG
Sbjct: 17 DMALREYIESTIRKVFESYGFSEIRTPIFEYTELFARK-SGEETDVVEKEMYTFKDKGGR 75
Query: 776 LLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIGHSPP--NRY---LQGDFDI 827
L L EL P R N K Y V+R + P RY Q ++
Sbjct: 76 SLALRPELTAPVARAVAENKLDLPKPLKLYYFGPVFR----YERPQKGRYRQFYQFGVEV 131
Query: 828 IGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELL 887
IG S +AEV+ + ++I+ + +N +LE + GI + RE + L
Sbjct: 132 IGSDSPDADAEVIALAVEILEALG-IGGFTLEINSRGILEGRLEYLGI--DQREALLRYL 188
Query: 888 AMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQAL----PRL 943
K I + L E + N L+ L +DQ L P L
Sbjct: 189 --------------DKLDKIGKLELDEDSKRRLKTNPLRV--LDSKKDSDQELLKNAPEL 232
Query: 944 RGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPAT 1001
L D+ + + L+EL L I + ID + Y+ F+ +
Sbjct: 233 LDYL--DEESLEHLEELLALLDALGI--SYEIDPSLVRGLDYYTGTVFEAVTDGLG---- 284
Query: 1002 LVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPP-SGVGASLALETIIQHYPVDFKPVR 1060
+G++ GGRYD L+ P VG ++ +E +I + K
Sbjct: 285 -AQGSVCG-GGRYDGLVEEF-----------GGKPTPAVGFAIGVERLILALEEEGKEDP 331
Query: 1061 NEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCL 1120
E V V G E ++L +L I + V L +Q++YA + +
Sbjct: 332 VETRVDVYVVP-LGEDAEPEALKLAQKLRAAGISVE-VDYSGRKLKKQFKYADKLGARFA 389
Query: 1121 VILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1156
VIL + G+V V+ L +++EV + LV L
Sbjct: 390 VILGEDELANGVVTVKDLATGEQEEVPLDELVEELK 425
|
Length = 429 |
| >gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 6e-25
Identities = 84/330 (25%), Positives = 133/330 (40%), Gaps = 103/330 (31%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
F+ L+ LG G +G V +K G+ A+K + ++ I++E++ L +
Sbjct: 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVE----EDLQEIIKEISILKQCDSP 58
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+YY GS F N T L+I ME
Sbjct: 59 YIVKYY-----------------GSY------FKN-----------------TDLWIVME 78
Query: 475 YCP------------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 522
YC +TL + +E+A L Q ++GL ++H IHRD+
Sbjct: 79 YCGAGSVSDIMKITNKTLTE---------EEIAAIL-YQTLKGLEYLHSNKKIHRDIKAG 128
Query: 523 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582
NI + K+ DFG++ QL D +T +GT F+ APE+ Q
Sbjct: 129 NILLNEEGQAKLADFGVS-----GQL-TDTMAKRNT---------VIGTPFWMAPEVIQE 173
Query: 583 WPKIDEKADMYSLGIVFFELWH---PFST--AMERQIVLSDLKQKGELPPSWVAKFSEQE 637
+ KAD++SLGI E+ P+S M R I + + K PP S+ E
Sbjct: 174 -IGYNNKADIWSLGITAIEMAEGKPPYSDIHPM-RAIFM--IPNK---PPP---TLSDPE 223
Query: 638 -------SLLRRLMSPSPSDRPSATELLQD 660
+++ + P +RPSA +LLQ
Sbjct: 224 KWSPEFNDFVKKCLVKDPEERPSAIQLLQH 253
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256 |
| >gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 76/317 (23%), Positives = 112/317 (35%), Gaps = 82/317 (25%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
+ LG G FG V K K G AVK ++ +D S + LRE + +L H +
Sbjct: 4 GKKLGEGAFGEVYKGKLKGKGGKKKVEVAVKTLK-EDASEQQIEEFLREARIMRKLDHPN 62
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
VV+ GV E LYI MEY
Sbjct: 63 VVKLL------GVC----------------------------------TEEEPLYIVMEY 82
Query: 476 CPR-TLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
L F QI G+ ++ + IHRDL N +K
Sbjct: 83 MEGGDLLSYLRKNRPKLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVK 142
Query: 534 IGDFGLAKFLKLEQLD--QDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 590
I DFGL++ L + + P + APE +++G K K+
Sbjct: 143 ISDFGLSRDLYDDDYYRKRGGKLP----------------IRWMAPESLKEG--KFTSKS 184
Query: 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS- 645
D++S G++ +E++ P+ M + VL LK LP L LM
Sbjct: 185 DVWSFGVLLWEIFTLGEQPYP-GMSNEEVLEYLKNGYRLPQP-----PNCPPELYDLMLQ 238
Query: 646 ---PSPSDRPSATELLQ 659
P DRP+ +EL++
Sbjct: 239 CWAEDPEDRPTFSELVE 255
|
Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257 |
| >gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 78/320 (24%), Positives = 125/320 (39%), Gaps = 79/320 (24%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+D E L LG G G V ++ G+ AVK IRL+ + +ILRE+ L +
Sbjct: 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINE-AIQKQILRELDILHKCNSP 59
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V +Y A++ +GD + I ME
Sbjct: 60 YIVGFYGAFYN------NGD----------------------------------ISICME 79
Query: 475 YCPRT-LRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARND 531
Y L ++ E + + + +++GL ++H + IIHRD+ P+NI ++R
Sbjct: 80 YMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQ 139
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPKIDEK 589
IK+ DFG++ L V+ + VGT Y APE QG K
Sbjct: 140 IKLCDFGVSGQL-------------------VNSLAKTFVGTSSYMAPERIQG-NDYSVK 179
Query: 590 ADMYSLGIVFFEL-------WHPFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQ-ESL 639
+D++SLG+ EL + L+ P KFS +
Sbjct: 180 SDIWSLGLSLIELATGRFPYPPENDPPDG---IFELLQYIVNEPPPRLPSGKFSPDFQDF 236
Query: 640 LRRLMSPSPSDRPSATELLQ 659
+ + P +RPS ELL+
Sbjct: 237 VNLCLIKDPRERPSYKELLE 256
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265 |
| >gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Score = 104 bits (261), Expect = 1e-24
Identities = 79/323 (24%), Positives = 119/323 (36%), Gaps = 93/323 (28%)
Query: 360 LQPLGHGGFGHVVLC--KNKLDGRHY--AVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
+ LG G FG V K K DG+ AVK ++ +D S + LRE + +L H +
Sbjct: 4 GKKLGEGAFGEVYKGTLKGKGDGKEVEVAVKTLK-EDASEQQIEEFLREARIMRKLDHPN 62
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V+ GV T +E L I MEY
Sbjct: 63 IVKLL------GV----------------------------CTEEEP------LMIVMEY 82
Query: 476 CP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
P R R S A QI G+ ++ + IHRDL N
Sbjct: 83 MPGGDLLDYLRKNRPKELSLSDL-LSFAL----QIARGMEYLESKNFIHRDLAARNCLVG 137
Query: 528 ARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWP 584
+KI DFGL++ L + + P + APE +++G
Sbjct: 138 ENLVVKISDFGLSRDLYDDDYYKVKGGKLP----------------IRWMAPESLKEG-- 179
Query: 585 KIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 640
K K+D++S G++ +E++ P+ M VL LK+ LP L
Sbjct: 180 KFTSKSDVWSFGVLLWEIFTLGEEPYP-GMSNAEVLEYLKKGYRLPKP-----PNCPPEL 233
Query: 641 RRLMS----PSPSDRPSATELLQ 659
+LM P DRP+ +EL++
Sbjct: 234 YKLMLQCWAEDPEDRPTFSELVE 256
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258 |
| >gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 102 bits (255), Expect = 1e-23
Identities = 69/249 (27%), Positives = 110/249 (44%), Gaps = 59/249 (23%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+++++ +G G +G V ++KL G A+KKIRL+ + V +RE++ L L H ++
Sbjct: 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNI 60
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
VR DV ENKL Y+ E+
Sbjct: 61 VRLL-----------------------------------DVVHSENKL-----YLVFEFL 80
Query: 477 PRTLRQVFESYDHF--DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
L++ +S D L Q+++G+A+ H ++HRDL P N+ D +K+
Sbjct: 81 DLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKL 140
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKADMY 593
DFGLA+ AF GV V T +V T +Y APEI G + D++
Sbjct: 141 ADFGLAR-----------AF-----GVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIW 184
Query: 594 SLGIVFFEL 602
S+G +F E+
Sbjct: 185 SIGCIFAEM 193
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283 |
| >gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Score = 101 bits (254), Expect = 1e-23
Identities = 76/323 (23%), Positives = 131/323 (40%), Gaps = 78/323 (24%)
Query: 355 NDFEELQPLGHGGFGHV--VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 412
+D+E ++ +G G V +C A+K+I L +K D + +EV +S+
Sbjct: 1 DDYELIEVIGVGATAVVYAAICLPN--NEKVAIKRIDL-EKCQTSVDELRKEVQAMSQCN 57
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +VV+YY ++ V G E L++
Sbjct: 58 HPNVVKYYTSF---------------------------------VVGDE-------LWLV 77
Query: 473 MEY-----CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
M Y ++ + D+ + + +++++GL ++H G IHRD+ NI
Sbjct: 78 MPYLSGGSLLDIMKSSY-PRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG 136
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPK 585
+KI DFG++ L GG + VGT + APE+ +
Sbjct: 137 EDGSVKIADFGVSASLA-------------DGGDRTRKVRKTFVGTPCWMAPEVMEQVHG 183
Query: 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-----VAKFSEQ- 636
D KAD++S GI EL P+S ++++ L+ PPS K+S+
Sbjct: 184 YDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQND---PPSLETGADYKKYSKSF 240
Query: 637 ESLLRRLMSPSPSDRPSATELLQ 659
++ + PS RP+A ELL+
Sbjct: 241 RKMISLCLQKDPSKRPTAEELLK 263
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267 |
| >gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Score = 100 bits (249), Expect = 3e-23
Identities = 77/308 (25%), Positives = 133/308 (43%), Gaps = 67/308 (21%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 419
++ +G G +G V L +++ DG+ Y +KK+ L++ S +E LS+L+H ++V Y
Sbjct: 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAY 64
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-- 477
++W + E LYI M +C
Sbjct: 65 RESW---------------------------------------EGEDGLLYIVMGFCEGG 85
Query: 478 ---RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
L++ ++ + W F QI L ++H + I+HRDL N+F N IK+
Sbjct: 86 DLYHKLKEQKGKLLPENQVVEW--FVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKV 143
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594
GD G+A+ L+ Q D + +GT +Y +PE+ P + K+D+++
Sbjct: 144 GDLGIARVLE-NQCDMASTL--------------IGTPYYMSPELFSNKP-YNYKSDVWA 187
Query: 595 LGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
LG +E L H F+ +V + +G+LPP E L+ ++S P R
Sbjct: 188 LGCCVYEMATLKHAFNAKDMNSLVYRII--EGKLPPMPKDYSPELGELIATMLSKRPEKR 245
Query: 652 PSATELLQ 659
PS +L+
Sbjct: 246 PSVKSILR 253
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257 |
| >gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Score = 100 bits (250), Expect = 5e-23
Identities = 70/252 (27%), Positives = 114/252 (45%), Gaps = 60/252 (23%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
D+ +++ +G G +G V +NK G+ A+KKIRL+ + V +RE++ L LQH +
Sbjct: 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPN 60
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V DV QE++L Y+ E+
Sbjct: 61 IVCL-----------------------------------QDVLMQESRL-----YLIFEF 80
Query: 476 CPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
L++ +S + D EL QI++G+ H + ++HRDL P N+ D + I
Sbjct: 81 LSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVI 140
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 591
K+ DFGLA+ AF G+ V T +V T +Y APE+ G P+ D
Sbjct: 141 KLADFGLAR-----------AF-----GIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVD 184
Query: 592 MYSLGIVFFELW 603
++S+G +F E+
Sbjct: 185 IWSIGTIFAEMA 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285 |
| >gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Score = 99.5 bits (248), Expect = 6e-23
Identities = 86/330 (26%), Positives = 138/330 (41%), Gaps = 97/330 (29%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHY-AVKKI-----------RLKDKSLPVNDRILRE 404
+ L+ LG G FG V + K +G++ A+K+I R +DKS+ I+ E
Sbjct: 2 YAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSI---GDIVSE 58
Query: 405 VATL-SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 463
V + +L+H ++VRYY+ +
Sbjct: 59 VTIIKEQLRHPNIVRYYKTF---------------------------------------- 78
Query: 464 LESTYLYIQMEY---CPRTLRQVF----ESYDHFDKELAWHLFRQIVEGLAHIHGQG-II 515
LE+ LYI M+ P L + F E F +E W++F Q+V L ++H + I+
Sbjct: 79 LENDRLYIVMDLIEGAP--LGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIV 136
Query: 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 575
HRDLTPNNI + + I DFGLAK Q ++ T VGT Y+
Sbjct: 137 HRDLTPNNIMLGEDDKVTITDFGLAK-----QKQPESKL-----------TSVVGTILYS 180
Query: 576 APEIEQGWPKIDEKADMYSLGIVFFE---LWHPFSTA----MERQIVLSDLKQKGELPPS 628
PEI + P EKAD+++ G + ++ L PF + + +IV + P
Sbjct: 181 CPEIVKNEP-YGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIV------EAVYEPL 233
Query: 629 WVAKFSEQESLL-RRLMSPSPSDRPSATEL 657
+SE + + ++P RP ++
Sbjct: 234 PEGMYSEDVTDVITSCLTPDAEARPDIIQV 263
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269 |
| >gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Score = 99.8 bits (249), Expect = 6e-23
Identities = 86/337 (25%), Positives = 132/337 (39%), Gaps = 88/337 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+E+L+ +G G +G V KN+ A+K++RL D V LRE+ L L+H+++
Sbjct: 2 YEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNI 61
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
VR Y DV + KL + EYC
Sbjct: 62 VRLY-----------------------------------DVLHSDKKLT-----LVFEYC 81
Query: 477 PRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
+ L++ F+S + D E+ Q+++GLA H ++HRDL P N+ + ++K+
Sbjct: 82 DQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLA 141
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKADMYS 594
DFGLA+ AF G+ V + +V T +Y P++ G DM+S
Sbjct: 142 DFGLAR-----------AF-----GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185
Query: 595 LGIVFFEL--------------------WHPFSTAMERQIV-LSDLKQKGELPP-----S 628
G +F EL + T E +S L P S
Sbjct: 186 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTS 245
Query: 629 WVAK----FSEQESLLRRLMSPSPSDRPSATELLQDA 661
V S LL+ L+ +P R SA E LQ
Sbjct: 246 LVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHP 282
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284 |
| >gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Score = 99 bits (250), Expect = 6e-23
Identities = 79/317 (24%), Positives = 128/317 (40%), Gaps = 97/317 (30%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKK------IRLKDKSLPVNDRILREVATL 408
+DFE ++ LG G FG V+L ++K G++YA+K ++LK + +L E L
Sbjct: 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQV-----EHVLNEKRIL 55
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
++H +V Y +F Q++
Sbjct: 56 QSIRHPFLVNLY------------------------GSF------------QDDS----N 75
Query: 469 LYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
LY+ MEY P LR+ F + +A Q+V L ++H I++RDL P N
Sbjct: 76 LYLVMEYVPGGELFSHLRKS----GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPEN 131
Query: 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTAPEIEQG 582
+ D+ IKI DFG AK +K T + GT Y APEI
Sbjct: 132 LLLDSDGYIKITDFGFAKRVK-------------------GRTYTLCGTPEYLAPEIILS 172
Query: 583 WPKIDEKADMYSLGIVFFEL---WHPFST----AMERQIVLSDLKQKGELPPSWVAKFSE 635
+ D ++LGI+ +E+ + PF + +I+ ++ PS+ FS
Sbjct: 173 KGY-GKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRF-----PSF---FSP 223
Query: 636 Q-ESLLRRLMSPSPSDR 651
+ L+R L+ + R
Sbjct: 224 DAKDLIRNLLQVDLTKR 240
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290 |
| >gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 7e-23
Identities = 95/380 (25%), Positives = 151/380 (39%), Gaps = 105/380 (27%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRLQH 413
N + +LQP+G G FG V +++L G++ A+KKI +K S PV R RE+ L L+H
Sbjct: 10 NRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKI-MKPFSTPVLAKRTYRELKLLKHLRH 68
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++++ ++D F + VT +L T L+ +
Sbjct: 69 ENII---------SLSDI---------------FISPLEDIYFVT----ELLGTDLHRLL 100
Query: 474 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
P +K+ + QI+ GL ++H G++HRDL P+NI + D+K
Sbjct: 101 TSRP------------LEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLK 148
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
I DFGLA+ QD TG V T +Y APEI W K D + D++
Sbjct: 149 ICDFGLARI-------QDPQM-----------TGYVSTRYYRAPEIMLTWQKYDVEVDIW 190
Query: 594 SLGIVFFELW------------HPFSTAME------------------RQIVLSDLKQKG 623
S G +F E+ + FS + + V S L ++
Sbjct: 191 SAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQS-LPKRE 249
Query: 624 ELPPSWVAKFSEQE--SLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSS 681
+P S K ++ LL +++ P R SA E L L H
Sbjct: 250 PVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALA------------HPYLAPYHDP 297
Query: 682 EDTSIYDKVVSSIFDEETLD 701
D + ++ F++ L
Sbjct: 298 TDEPVAEEKFDWSFNDADLP 317
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328 |
| >gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-22
Identities = 102/382 (26%), Positives = 154/382 (40%), Gaps = 86/382 (22%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+DFE ++ +G G FG V L ++K G+ YA+K +R D +++ R Q
Sbjct: 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSD--------MIK------RNQIA 46
Query: 415 HVVRYYQAWFETGVADF--DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
HV E D D DS W S F Q+ + +LY+
Sbjct: 47 HV------RAER---DILADADSPWIVKLYYS--F------------QDEE----HLYLV 79
Query: 473 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
MEY P L + D F +E A ++V L +H G IHRD+ P+NI DA
Sbjct: 80 MEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGH 139
Query: 532 IKIGDFGLAK--------FLKLEQLDQDAAFPTDTGGVSVDGTGQ-------VGTYFYTA 576
IK+ DFGL K L + F + D + VGT Y A
Sbjct: 140 IKLADFGLCKKMNKAKDREYYLNDS-HNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIA 198
Query: 577 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFS--TAMERQIVLSDLKQKGELPPSWVA 631
PE+ +G P + D +SLG++ +E+ + PF T E + + K+ PP
Sbjct: 199 PEVLRGTP-YGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPD--P 255
Query: 632 KFS-EQESLLRRLMSPSPSDR-PSATELLQDALPPQMEYELLDNILR-------MMHSSE 682
S E L+ RL+ P DR S E+ +++E N+ + S
Sbjct: 256 PVSPEAIDLICRLLCD-PEDRLGSFEEIKSHPFFKGIDWE---NLRETKPPFVPELSSPL 311
Query: 683 DTSIYDKVVSSIFDEETLDMKH 704
DTS +D F+++ +
Sbjct: 312 DTSNFDD-----FEDDKDLSDY 328
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350 |
| >gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase | Back alignment and domain information |
|---|
Score = 98.0 bits (245), Expect = 2e-22
Identities = 77/324 (23%), Positives = 125/324 (38%), Gaps = 87/324 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQ 412
E + LG G FG V K DG AVK ++ + S + L E + + +L
Sbjct: 1 LELGKKLGEGAFGEVYKGTLKGDGEGTETKVAVKTLK-EGASEEEREEFLEEASIMKKLS 59
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H ++VR GV T E LYI
Sbjct: 60 HPNIVRLL------GV----------------------------CTQGE------PLYIV 79
Query: 473 MEYCP----RT-LRQVFESYDHFDK-ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
EY P LR+ E D ++A QI +G+ ++ + +HRDL N
Sbjct: 80 TEYMPGGDLLDFLRKHGEKLTLKDLLQMAL----QIAKGMEYLESKNFVHRDLAARNCLV 135
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPK 585
+KI DFGL++ + + D G + + APE ++ G K
Sbjct: 136 TENLVVKISDFGLSRDI----------YEDDYYRKRGGGKLPI---KWMAPESLKDG--K 180
Query: 586 IDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQ 636
K+D++S G++ +E++ P+ M + VL L+ LP P + +
Sbjct: 181 FTSKSDVWSFGVLLWEIFTLGEQPYP-GMSNEEVLELLEDGYRLPRPENCPDELYE---- 235
Query: 637 ESLLRRLMSPSPSDRPSATELLQD 660
L+ + + P DRP+ +EL++D
Sbjct: 236 --LMLQCWAYDPEDRPTFSELVED 257
|
Length = 258 |
| >gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 98.0 bits (245), Expect = 2e-22
Identities = 70/251 (27%), Positives = 101/251 (40%), Gaps = 64/251 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI-LREVATLSRLQ-HQ 414
++ ++ LG G FG V L +NK G A+KK +K K + + LREV +L +L H
Sbjct: 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKK--MKKKFYSWEECMNLREVKSLRKLNEHP 58
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+ E E+ LY E
Sbjct: 59 NIVKLK----------------------------------------EVFRENDELYFVFE 78
Query: 475 YCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
Y L Q+ + F + + + QI++GLAHIH G HRDL P N+ +
Sbjct: 79 YMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVV 138
Query: 533 KIGDFGLAKFLKLEQLDQDAAFP-TDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
KI DFGLA+ E + P TD V T +Y APEI D
Sbjct: 139 KIADFGLAR----EIRSRP---PYTD----------YVSTRWYRAPEILLRSTSYSSPVD 181
Query: 592 MYSLGIVFFEL 602
+++LG + EL
Sbjct: 182 IWALGCIMAEL 192
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283 |
| >gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 102 bits (254), Expect = 8e-22
Identities = 87/338 (25%), Positives = 146/338 (43%), Gaps = 89/338 (26%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
LN++E ++ +G+G FG V L K+K + K I + +++ EV + L+H
Sbjct: 12 LNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKH 71
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+++VRY F N+A LYI M
Sbjct: 72 KNIVRYI------------------------DRFLNKANQK--------------LYILM 93
Query: 474 EYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-------GQGIIHRDLTP 521
E+C R +++ ++ + ++ + RQ++ LA+ H G+ ++HRDL P
Sbjct: 94 EFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKP 153
Query: 522 NNIF-----------------FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564
NIF + R KIGDFGL+K + +E +
Sbjct: 154 QNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSC------------ 201
Query: 565 GTGQVGTYFYTAPEIEQGWPK-IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK 620
VGT +Y +PE+ K D+K+DM++LG + +EL PF A ++S+LK
Sbjct: 202 ----VGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELK 257
Query: 621 QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658
+ +LP K E L++ L++ S +RPSA + L
Sbjct: 258 RGPDLPIK--GKSKELNILIKNLLNLSAKERPSALQCL 293
|
Length = 1021 |
| >gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 96.2 bits (240), Expect = 8e-22
Identities = 75/326 (23%), Positives = 133/326 (40%), Gaps = 90/326 (27%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR--ILREVATLSRLQH 413
D+E +Q +G G +G V ++ G A+K I+L+ +D I +E++ L +H
Sbjct: 4 DYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG----DDFEIIQQEISMLKECRH 59
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V Y+ ++ L L+I M
Sbjct: 60 PNIVAYFGSY----------------------------------------LRRDKLWIVM 79
Query: 474 EYCP-RTLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
EYC +L+ ++ + + ++ R+ ++GLA++H G IHRD+ NI D
Sbjct: 80 EYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGD 139
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEK 589
+K+ DFG++ L + + +F +GT ++ APE+ + D K
Sbjct: 140 VKLADFGVSAQLT-ATIAKRKSF--------------IGTPYWMAPEVAAVERKGGYDGK 184
Query: 590 ADMYSLGIVFFELWHPFSTAMERQIVLSDLK---------QKGELPPS------WVAKFS 634
D+++LGI EL E Q + DL + PP W F
Sbjct: 185 CDIWALGITAIEL-------AELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVF- 236
Query: 635 EQESLLRRLMSPSPSDRPSATELLQD 660
+++ ++ P RP+AT+LLQ
Sbjct: 237 --HDFIKKCLTKDPKKRPTATKLLQH 260
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262 |
| >gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Score = 96.9 bits (242), Expect = 9e-22
Identities = 63/257 (24%), Positives = 105/257 (40%), Gaps = 73/257 (28%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP---VNDRILREVATLSRLQH 413
+E+ + LG G + V ++K GR A+KKI+L ++ +N LRE+ L L+H
Sbjct: 2 YEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKH 61
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+++ DV G + + + +
Sbjct: 62 PNIIGLL-----------------------------------DVFGHK-----SNINLVF 81
Query: 474 EYCPRTLRQVFESYDHFDKEL--------AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525
E+ L +V + DK + ++ L + GL ++H I+HRDL PNN+
Sbjct: 82 EFMETDLEKVIK-----DKSIVLTPADIKSYML--MTLRGLEYLHSNWILHRDLKPNNLL 134
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585
+ +K+ DFGLA+ F + + T QV T +Y APE+ G
Sbjct: 135 IASDGVLKLADFGLARS-----------FGSP----NRKMTHQVVTRWYRAPELLFGARH 179
Query: 586 IDEKADMYSLGIVFFEL 602
DM+S+G +F EL
Sbjct: 180 YGVGVDMWSVGCIFAEL 196
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298 |
| >gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 95.4 bits (238), Expect = 2e-21
Identities = 66/256 (25%), Positives = 100/256 (39%), Gaps = 67/256 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR--LKDKSLPVNDRILREVATLSRLQ-- 412
+EEL +G G +G V ++ GR A+KK+R L ++ +P++ LRE+A L +L+
Sbjct: 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLS--TLREIALLKQLESF 58
Query: 413 -HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H ++VR DV L +
Sbjct: 59 EHPNIVRLL-----------------------------------DVCHGPRTDRELKLTL 83
Query: 472 QMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
E+ + L E L RQ++ G+ +H I+HRDL P NI +
Sbjct: 84 VFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSD 143
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
+KI DFGLA+ + A T V T +Y APE+
Sbjct: 144 GQVKIADFGLARI-----YSFEMAL-----------TSVVVTLWYRAPEVLLQ----SSY 183
Query: 590 A---DMYSLGIVFFEL 602
A DM+S+G +F EL
Sbjct: 184 ATPVDMWSVGCIFAEL 199
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287 |
| >gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Score = 93.7 bits (233), Expect = 8e-21
Identities = 70/251 (27%), Positives = 110/251 (43%), Gaps = 63/251 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H ++
Sbjct: 2 FQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNI 61
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V+ DV ENKL Y+ E+
Sbjct: 62 VKLL-----------------------------------DVIHTENKL-----YLVFEFL 81
Query: 477 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
+ L++ ++ + L + Q+++GLA H ++HRDL P N+ + I
Sbjct: 82 HQDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAI 139
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 591
K+ DFGLA+ AF GV V T +V T +Y APEI G D
Sbjct: 140 KLADFGLAR-----------AF-----GVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVD 183
Query: 592 MYSLGIVFFEL 602
++SLG +F E+
Sbjct: 184 IWSLGCIFAEM 194
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284 |
| >gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 92.6 bits (230), Expect = 1e-20
Identities = 83/307 (27%), Positives = 124/307 (40%), Gaps = 69/307 (22%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSRLQHQHVVR 418
LG G FG V LC + GR AVK++ + VN + E+ L LQH+ +V+
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVN-ALECEIQLLKNLQHERIVQ 68
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
YY G L + L I MEY P
Sbjct: 69 YY-------------------GCLR---------------------DDETLSIFMEYMPG 88
Query: 479 -TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 537
+++ ++Y + + RQI+EG+ ++H I+HRD+ NI D+ ++K+GDF
Sbjct: 89 GSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDF 148
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597
G +K L+ TG SV GT ++ +PE+ G KAD++S+G
Sbjct: 149 GASKRLQTICSSG-------TGMKSV-----TGTPYWMSPEVISG-EGYGRKADVWSVGC 195
Query: 598 VFFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
E+ W F AM ++ +LP LRR + R
Sbjct: 196 TVVEMLTEKPPWAEFE-AMAAIFKIATQPTNPQLPSHVSPDARN---FLRRTFVENAKKR 251
Query: 652 PSATELL 658
PSA ELL
Sbjct: 252 PSAEELL 258
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263 |
| >gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Score = 91.6 bits (228), Expect = 3e-20
Identities = 66/304 (21%), Positives = 109/304 (35%), Gaps = 70/304 (23%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRLQHQ 414
FE L+ +G G FG V + + + + +A+K + K K + +L E L L H
Sbjct: 2 FELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMN-KQKCVEKGSVRNVLNERRILQELNHP 60
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+V ++W +F + +Y+ ++
Sbjct: 61 FLV-----------------NLW-------YSFQDE----------------ENMYLVVD 80
Query: 475 YC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
LR F +E +IV L ++H +GIIHRD+ P+NI D + +
Sbjct: 81 LLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVH 140
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
I DF +A + + L T GT Y APE+ D +
Sbjct: 141 ITDFNIATKVTPDTL----------------TTSTSGTPGYMAPEVLCR-QGYSVAVDWW 183
Query: 594 SLGIVFFELWH---PF---STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647
SLG+ +E P+ S + QI P +W +E + +L+
Sbjct: 184 SLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLYPATWS---TEAIDAINKLLERD 240
Query: 648 PSDR 651
P R
Sbjct: 241 PQKR 244
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258 |
| >gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 90.7 bits (226), Expect = 6e-20
Identities = 73/326 (22%), Positives = 117/326 (35%), Gaps = 96/326 (29%)
Query: 362 PLGHGGFGHVVLCK-NKLDGRHY--AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
LG G FG V K DG+ AVK ++ +D S L+E + +L H +VVR
Sbjct: 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLK-EDASEEERKDFLKEARVMKKLGHPNVVR 60
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 477
GV + LY+ +EY
Sbjct: 61 LL------GVC---------------------------TEEEP-------LYLVLEYMEG 80
Query: 478 -------RTLRQVFESYDHFDKELAWHLF----RQIVEGLAHIHGQGIIHRDLTPNNIFF 526
R R VF S L+ QI +G+ ++ + +HRDL N
Sbjct: 81 GDLLDYLRKSRPVFPS--PEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLV 138
Query: 527 DARNDIKIGDFGLAKFLKLEQ---LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQG 582
+KI DFGL++ + + P + APE ++ G
Sbjct: 139 GEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPI----------------RWMAPESLKDG 182
Query: 583 WPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQE 637
K+D++S G++ +E++ P+ + + VL L++ LP P +
Sbjct: 183 --IFTSKSDVWSFGVLLWEIFTLGATPYPG-LSNEEVLEYLRKGYRLPKPEYCPDE---- 235
Query: 638 SLLRRLM----SPSPSDRPSATELLQ 659
L LM P DRP+ +EL++
Sbjct: 236 --LYELMLSCWQLDPEDRPTFSELVE 259
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262 |
| >gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 6e-20
Identities = 74/352 (21%), Positives = 128/352 (36%), Gaps = 80/352 (22%)
Query: 344 PNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRI 401
P ++ +E+L +G G FG V ++K + A+KK+ ++++ P+
Sbjct: 1 DQYEFPFCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPIT--A 58
Query: 402 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 461
LRE+ L L+H++VV + T A+
Sbjct: 59 LREIKILQLLKHENVVNLIEI----------------CRTKAT---------------PY 87
Query: 462 NKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520
N+ + ++ Y+ E+C L + + F + + ++ GL +IH I+HRD+
Sbjct: 88 NRYKGSF-YLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMK 146
Query: 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580
NI +K+ DFGLA+ AF T +V T +Y PE+
Sbjct: 147 AANILITKDGILKLADFGLAR-----------AFSLSKNSKPNRYTNRVVTLWYRPPELL 195
Query: 581 QGWPKIDEKADMYSLGIVFFELW--HPFSTAMERQIVLS--------------------D 618
G DM+ G + E+W P Q L+ +
Sbjct: 196 LGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLE 255
Query: 619 LKQKGELPPS---WV-----AKFSEQES--LLRRLMSPSPSDRPSATELLQD 660
L +K ELP V + + L+ +L+ P+ R A L
Sbjct: 256 LFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNH 307
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310 |
| >gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Score = 89.5 bits (222), Expect = 2e-19
Identities = 62/253 (24%), Positives = 101/253 (39%), Gaps = 57/253 (22%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QH 415
+E+L+ +G G +G V ++K G+ A+KK RL+ + LRE++ L L +
Sbjct: 3 YEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIY 62
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+VR DV E K LY+ EY
Sbjct: 63 IVRLL-----------------------------------DVEHVEEKNGKPSLYLVFEY 87
Query: 476 CPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD-AR 529
L++ +S + Q+++G+AH H G++HRDL P N+ D +
Sbjct: 88 LDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQK 147
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
+KI D GL + AF T ++ T +Y APE+ G
Sbjct: 148 GLLKIADLGLGR-----------AFSIPVKSY----THEIVTLWYRAPEVLLGSTHYSTP 192
Query: 590 ADMYSLGIVFFEL 602
D++S+G +F E+
Sbjct: 193 VDIWSVGCIFAEM 205
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295 |
| >gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Score = 90.6 bits (225), Expect = 3e-19
Identities = 70/255 (27%), Positives = 108/255 (42%), Gaps = 48/255 (18%)
Query: 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATL 408
SRY+ +L+PLG G G V + + AVKKI L D +S+ LRE+ +
Sbjct: 4 GSRYM----DLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSV---KHALREIKII 56
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
RL H ++V+ Y+ L S S + E
Sbjct: 57 RRLDHDNIVKVYEV-------------------LGPS-------GSDLTEDVGSLTELNS 90
Query: 469 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
+YI EY L V E +E A Q++ GL +IH ++HRDL P N+F +
Sbjct: 91 VYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT 149
Query: 529 RNDI-KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
+ + KIGDFGLA+ +D + G +S + T +Y +P +
Sbjct: 150 EDLVLKIGDFGLARI-----VDPHY---SHKGYLSEG----LVTKWYRSPRLLLSPNNYT 197
Query: 588 EKADMYSLGIVFFEL 602
+ DM++ G +F E+
Sbjct: 198 KAIDMWAAGCIFAEM 212
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342 |
| >gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Score = 89.0 bits (220), Expect = 3e-19
Identities = 81/310 (26%), Positives = 130/310 (41%), Gaps = 72/310 (23%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILR---EVATLSRLQHQHVVRY 419
LG G FG V LC + GR A K+++ +S + + E+ L LQH+ +V+Y
Sbjct: 10 LGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQY 69
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 478
Y G L ++ E T L I MEY P
Sbjct: 70 Y-------------------GCL------------------RDRAEKT-LTIFMEYMPGG 91
Query: 479 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
+++ ++Y + + RQI+EG++++H I+HRD+ NI D+ ++K+GDFG
Sbjct: 92 SVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFG 151
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ---VGTYFYTAPEIEQGWPKIDEKADMYSL 595
+K L+ + + GTG GT ++ +PE+ G KAD++SL
Sbjct: 152 ASKRLQT---------------ICMSGTGIRSVTGTPYWMSPEVISG-EGYGRKADVWSL 195
Query: 596 GIVFFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649
G E+ W + AM ++ +LP + SE +
Sbjct: 196 GCTVVEMLTEKPPWAEYE-AMAAIFKIATQPTNPQLP----SHISEHARDFLGCIFVEAR 250
Query: 650 DRPSATELLQ 659
RPSA ELL+
Sbjct: 251 HRPSAEELLR 260
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266 |
| >gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 89.0 bits (221), Expect = 4e-19
Identities = 76/326 (23%), Positives = 132/326 (40%), Gaps = 82/326 (25%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
EL LG G G V C+ K G +A+K I D + + +ILRE+ +
Sbjct: 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTI-TTDPNPDLQKQILRELEINKSCKSP 59
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+YY F + ++SS + I ME
Sbjct: 60 YIVKYY------------------------GAFLDESSSS--------------IGIAME 81
Query: 475 YCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
YC ++V + +++ + +++GL+++H + IIHRD+ P+NI +
Sbjct: 82 YCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRK 141
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KIDE 588
+K+ DFG++ L S+ GT GT FY APE QG P I
Sbjct: 142 GQVKLCDFGVSGEL----------------VNSLAGTF-TGTSFYMAPERIQGKPYSI-- 182
Query: 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSD------------LKQKGELPPSWVAKF 633
+D++SLG+ E+ PF E + + LK + W +F
Sbjct: 183 TSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEF 242
Query: 634 SEQESLLRRLMSPSPSDRPSATELLQ 659
+ +++ + P+ RP+ ++L+
Sbjct: 243 ---KDFIKQCLEKDPTRRPTPWDMLE 265
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287 |
| >gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Score = 88.7 bits (220), Expect = 5e-19
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 64/255 (25%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
++ +E+++ +G G +G V ++++ A+KKIRL+ + V +RE++ L +QH
Sbjct: 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQH 60
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++VR DV E +L Y+
Sbjct: 61 GNIVRLQ-----------------------------------DVVHSEKRL-----YLVF 80
Query: 474 EYCPRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
EY L++ +S F K L + QI+ G+A+ H ++HRDL P N+ D R
Sbjct: 81 EYLDLDLKKHMDSSPDFAKNP--RLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRR 138
Query: 530 -NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKID 587
N +K+ DFGLA+ AF G+ V T +V T +Y APEI G
Sbjct: 139 TNALKLADFGLAR-----------AF-----GIPVRTFTHEVVTLWYRAPEILLGSRHYS 182
Query: 588 EKADMYSLGIVFFEL 602
D++S+G +F E+
Sbjct: 183 TPVDIWSVGCIFAEM 197
|
Length = 294 |
| >gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Score = 88.6 bits (220), Expect = 5e-19
Identities = 82/340 (24%), Positives = 126/340 (37%), Gaps = 92/340 (27%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI-LREVATLSRLQHQH 415
+E+L +G G +G V C+N+ G+ A+KK ++ + PV +I LRE+ L +L+H +
Sbjct: 3 YEKLSKIGEGSYGVVFKCRNRETGQIVAIKKF-VESEDDPVIKKIALREIRMLKQLKHPN 61
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE----STYLYI 471
+V N +E L++
Sbjct: 62 LV--------------------------------------------NLIEVFRRKRKLHL 77
Query: 472 QMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
EYC T+ E + L + Q ++ + H IHRD+ P NI +
Sbjct: 78 VFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQG 137
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
IK+ DFG A+ L TG D T V T +Y APE+ G +
Sbjct: 138 QIKLCDFGFARIL--------------TGP-GDDYTDYVATRWYRAPELLVGDTQYGPPV 182
Query: 591 DMYSLGIVFFE------LWHPFSTAMERQIVLSDLKQK-------GELPPSWVAKFSEQE 637
D++++G VF E LW P SD+ Q G+L P FS
Sbjct: 183 DVWAIGCVFAELLTGQPLW-PGK---------SDVDQLYLIRKTLGDLIPRHQQIFS-TN 231
Query: 638 SLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
+ L P P R + P + + L L+M
Sbjct: 232 QFFKGLSIPEPETREPLESKFPNISSPALSF--LKGCLQM 269
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286 |
| >gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Score = 87.7 bits (217), Expect = 5e-19
Identities = 91/321 (28%), Positives = 139/321 (43%), Gaps = 90/321 (28%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVND-------RILREVATLSRLQ 412
Q LG G FG V L K+K AV + RLK K +PV + + +E LS+L
Sbjct: 6 QRLGKGSFGTVYLVKDK-----KAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLD 60
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +V+++ ++ E ++ I
Sbjct: 61 HPAIVKFHASFLE----------------------------------RDA------FCII 80
Query: 473 MEYCP-RTLRQVFESYDHFDKELA------WHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525
EYC R L E H K L+ W F Q++ G+ ++H + I+HRDL NIF
Sbjct: 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEW--FIQLLLGVHYMHQRRILHRDLKAKNIF 138
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGW 583
N +KIGDFG+++ L G T GT +Y +PE QG+
Sbjct: 139 L-KNNLLKIGDFGVSRLLM---------------GSCDLATTFTGTPYYMSPEALKHQGY 182
Query: 584 PKIDEKADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESL 639
D K+D++SLG + +E L H F +VL + +G PS +S Q S+
Sbjct: 183 ---DSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV--EGP-TPSLPETYSRQLNSI 236
Query: 640 LRRLMSPSPSDRPSATELLQD 660
++ +++ PS RPSA E+L++
Sbjct: 237 MQSMLNKDPSLRPSAAEILRN 257
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260 |
| >gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 87.9 bits (218), Expect = 7e-19
Identities = 82/317 (25%), Positives = 132/317 (41%), Gaps = 79/317 (24%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--- 413
++ L+ +G G +G V K+ GR A+K I L V+D I REVA LS+L+
Sbjct: 3 YQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSD-IQREVALLSQLRQSQP 61
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++ +YY ++ L+ L+I M
Sbjct: 62 PNITKYYGSY----------------------------------------LKGPRLWIIM 81
Query: 474 EYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
EY RTL + ++ + R+++ L +IH G+IHRD+ NI
Sbjct: 82 EYAEGGSVRTLMKA----GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNT 137
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
++K+ DFG+A A ++ S VGT ++ APE+ D K
Sbjct: 138 GNVKLCDFGVA-----------ALLNQNSSKRST----FVGTPYWMAPEVITEGKYYDTK 182
Query: 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS- 645
AD++SLGI +E+ P+S + ++ K K PP + + LLR ++
Sbjct: 183 ADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK---PPR--LEDNGYSKLLREFVAA 237
Query: 646 ---PSPSDRPSATELLQ 659
P +R SA ELL+
Sbjct: 238 CLDEEPKERLSAEELLK 254
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277 |
| >gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 90.8 bits (225), Expect = 8e-19
Identities = 72/234 (30%), Positives = 114/234 (48%), Gaps = 38/234 (16%)
Query: 469 LYIQMEY-----CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
L + MEY + ++Q + + F + LF QIV L +H + ++HRDL N
Sbjct: 140 LLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSAN 199
Query: 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIEQG 582
IF IK+GDFG +K + VS+D + GT +Y APE+
Sbjct: 200 IFLMPTGIIKLGDFGFSK--------------QYSDSVSLDVASSFCGTPYYLAPEL--- 242
Query: 583 W--PKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE 637
W + +KADM+SLG++ +EL PF +R+I+ L K + P V+ S +
Sbjct: 243 WERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDPFPCPVS--SGMK 300
Query: 638 SLLRRLMSPSPSDRPSATELLQDALPPQMEY--ELLDNILRMMHSSEDTSIYDK 689
+LL L+S +P+ RP+ +LL ++Y L +I+R SE S +D+
Sbjct: 301 ALLDPLLSKNPALRPTTQQLLHTEF---LKYVANLFQDIVR---HSETISPHDR 348
|
Length = 478 |
| >gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Score = 87.0 bits (215), Expect = 1e-18
Identities = 85/307 (27%), Positives = 134/307 (43%), Gaps = 66/307 (21%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILR---EVATLSRLQHQHVVRY 419
LG G FG V LC + GR AVK+++ +S + + E+ L L H+ +V+Y
Sbjct: 10 LGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQY 69
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 478
Y G L + +E T L I ME+ P
Sbjct: 70 Y-------------------GCL------------------RDPMERT-LSIFMEHMPGG 91
Query: 479 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
+++ +SY + + RQI+EG++++H I+HRD+ NI D+ ++K+GDFG
Sbjct: 92 SIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFG 151
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598
+K L+ L + TG SV GT ++ +PE+ G KAD++S+G
Sbjct: 152 ASKRLQTICL-------SGTGMKSV-----TGTPYWMSPEVISG-EGYGRKADIWSVGCT 198
Query: 599 FFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652
E+ W F AM ++ LPP V+ L+R+ + RP
Sbjct: 199 VVEMLTEKPPWAEFE-AMAAIFKIATQPTNPVLPPH-VSDHCRD--FLKRIFVEA-KLRP 253
Query: 653 SATELLQ 659
SA ELL+
Sbjct: 254 SADELLR 260
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265 |
| >gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Score = 86.8 bits (215), Expect = 2e-18
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 49/256 (19%)
Query: 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILREVATL 408
R ++ F+ + +G G +G V ++K G A+KK+RL ++ P+ +RE+ L
Sbjct: 3 KRCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPIT--AIREIKIL 60
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
+L H+++V + V D D++ + K +
Sbjct: 61 RQLNHRNIVNLKEI-----VTD-KQDAL------------------------DFKKDKGA 90
Query: 469 LYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
Y+ EY L + ES HF ++ +Q++EGL + H + +HRD+ +NI +
Sbjct: 91 FYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN 150
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
+ IK+ DFGLA+ + + + P T +V T +Y PE+ G +
Sbjct: 151 NKGQIKLADFGLARL-----YNSEESRPY---------TNKVITLWYRPPELLLGEERYG 196
Query: 588 EKADMYSLGIVFFELW 603
D++S G + EL+
Sbjct: 197 PAIDVWSCGCILGELF 212
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302 |
| >gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 8e-18
Identities = 64/247 (25%), Positives = 100/247 (40%), Gaps = 55/247 (22%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
++ L P+G G +G V + GR A+KK+ +S R RE+ L + H++V
Sbjct: 17 YQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENV 76
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV-TGQENKLESTYLYIQMEY 475
+ DV T + + +Y+
Sbjct: 77 I-----------------------------------GLLDVFTPASSLEDFQDVYLVTHL 101
Query: 476 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
L + + D + + L QI+ GL +IH GIIHRDL P+NI + ++KI
Sbjct: 102 MGADLNNIVKCQKLSDDHIQF-LVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKIL 160
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFGLA+ D + TG V T +Y APEI W ++ D++S+
Sbjct: 161 DFGLAR-----HTDDEM-------------TGYVATRWYRAPEIMLNWMHYNQTVDIWSV 202
Query: 596 GIVFFEL 602
G + EL
Sbjct: 203 GCIMAEL 209
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343 |
| >gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Score = 84.0 bits (208), Expect = 2e-17
Identities = 80/324 (24%), Positives = 122/324 (37%), Gaps = 82/324 (25%)
Query: 360 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
++ LG G FG V LC+ G AVK + + +D RE+ L L H++
Sbjct: 9 IKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSD-FEREIEILRTLDHEN 67
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V+Y GV + G L + MEY
Sbjct: 68 IVKY------KGVCEKPGGRS--------------------------------LRLIMEY 89
Query: 476 CPR-TLRQVFESYDHFDKELAWHLFR---QIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
P +LR + H D+ L QI +G+ ++ Q IHRDL NI ++ +
Sbjct: 90 LPSGSLRDYLQR--HRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDL 147
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 590
+KI DFGLAK L P D V G+ ++Y APE + K +
Sbjct: 148 VKISDFGLAKVL-----------PEDKDYYYVKEPGESPIFWY-APECLRTS--KFSSAS 193
Query: 591 DMYSLGIVFFELW-------HPFSTAMERQIVLSD----------LKQKGELPPSWVAKF 633
D++S G+ +EL+ P + + + LK+ LP +
Sbjct: 194 DVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLKEGERLPRP-PSCP 252
Query: 634 SEQESLLRRLMSPSPSDRPSATEL 657
E L++ P DRPS +L
Sbjct: 253 DEVYDLMKLCWEAEPQDRPSFADL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284 |
| >gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Score = 83.2 bits (205), Expect = 3e-17
Identities = 79/306 (25%), Positives = 132/306 (43%), Gaps = 62/306 (20%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
F +L+ +G G FG V + + A+K I L++ + D I +E+ LS+ +V
Sbjct: 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYV 64
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+YY ++ L+ T L+I MEY
Sbjct: 65 TKYYGSY----------------------------------------LKGTKLWIIMEYL 84
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
FD+ + ++I++GL ++H + IHRD+ N+ + D+K+ D
Sbjct: 85 GGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLAD 144
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FG+A L Q+ ++ VGT F+ APE+ Q D KAD++SLG
Sbjct: 145 FGVAGQLTDTQIKRNTF---------------VGTPFWMAPEVIQQ-SAYDSKADIWSLG 188
Query: 597 IVFFEL--WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPS 653
I EL P ++ M VL + + PP+ +FS+ + + ++ PS RP+
Sbjct: 189 ITAIELAKGEPPNSDMHPMRVLFLIPKNN--PPTLTGEFSKPFKEFIDACLNKDPSFRPT 246
Query: 654 ATELLQ 659
A ELL+
Sbjct: 247 AKELLK 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277 |
| >gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 84.7 bits (210), Expect = 3e-17
Identities = 93/390 (23%), Positives = 150/390 (38%), Gaps = 97/390 (24%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRL 411
+DFE ++ +G G FG V L + K G YA+KK+R + K + R R++ L+
Sbjct: 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDI--LAEA 58
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+ VV+ Y ++ Q+ YLY+
Sbjct: 59 DNPWVVKLYYSF------------------------------------QDEN----YLYL 78
Query: 472 QMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
MEY P TL D F +E + + + IH G IHRD+ P+N+ D
Sbjct: 79 IMEYLPGGDMMTL---LMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD 135
Query: 528 ARNDIKIGDFGLAKFL-KLEQLDQDAAFPTDTGGVSVDGTGQ------------------ 568
A+ IK+ DFGL L K + + +D +
Sbjct: 136 AKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRAL 195
Query: 569 ----VGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDL 619
VGT Y APE+ + G+ K + D +SLG++ +E+ + PF + ++ +
Sbjct: 196 AYSTVGTPDYIAPEVFLQTGYNK---ECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKII 252
Query: 620 KQKGELP-PSWVAKFSEQESLLRRLMSPSPSDR---PSATELLQDALPPQMEYELLDN-- 673
K L P V E + L++RL R E+ +++E +
Sbjct: 253 NWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGVDWEHIRERP 311
Query: 674 --ILRMMHSSEDTSIYDKVVSSIFDEETLD 701
I+ + S DTS +D F+E LD
Sbjct: 312 APIIPELKSITDTSNFDD-----FEEIDLD 336
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364 |
| >gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 82.5 bits (204), Expect = 5e-17
Identities = 81/316 (25%), Positives = 131/316 (41%), Gaps = 82/316 (25%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
LG G FG V ++K G A K I+++ + + D ++ E+ LS +H ++V Y+A
Sbjct: 13 LGDGAFGKVYKAQHKETGLFAAAKIIQIESEE-ELEDFMV-EIDILSECKHPNIVGLYEA 70
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR 481
+F ++ L+I +E+C L
Sbjct: 71 YF------YENK----------------------------------LWILIEFCDGGALD 90
Query: 482 QVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 540
+ + + ++ RQ++E L +H +IHRDL NI D+K+ DFG++
Sbjct: 91 SIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVS 150
Query: 541 KFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-------EQGWPKIDEKADMY 593
K +D F +GT ++ APE+ + + D KAD++
Sbjct: 151 AKNKSTLQKRD-TF--------------IGTPYWMAPEVVACETFKDNPY---DYKADIW 192
Query: 594 SLGIVFFELWH--PFSTAMERQIVLSDLK-QKGELP----PS-WVAKFSEQESLLRRLMS 645
SLGI EL P + VL LK K E P PS W + F++ L+ +
Sbjct: 193 SLGITLIELAQMEPPHHELNPMRVL--LKILKSEPPTLDQPSKWSSSFND---FLKSCLV 247
Query: 646 PSPSDRPSATELLQDA 661
P DRP+A ELL+
Sbjct: 248 KDPDDRPTAAELLKHP 263
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280 |
| >gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Score = 86.4 bits (214), Expect = 5e-17
Identities = 87/325 (26%), Positives = 139/325 (42%), Gaps = 62/325 (19%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIR--LKDKSLPVNDRILREVATLSRLQHQHVVRYY 420
+G GG G V L + + R A+KKIR L + L + R LRE + L H +V Y
Sbjct: 10 IGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPL-LKKRFLREAKIAADLIHPGIVPVY 68
Query: 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 480
+ DGD ++ T YI+ L
Sbjct: 69 S------ICS-DGDPVY----------------------------YTMPYIEGYTLKSLL 93
Query: 481 RQVFESYDHFDKELA--------WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
+ V++ + KELA +F +I + ++H +G++HRDL P+NI ++
Sbjct: 94 KSVWQK-ESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEV 152
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT--GQ-VGTYFYTAPEIEQGWPKIDEK 589
I D+G A F KLE+ D + T G+ VGT Y APE G P E
Sbjct: 153 VILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPA-SES 211
Query: 590 ADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL--- 643
D+Y+LG++ ++ L P+ R+I D+ L P VA + E L ++
Sbjct: 212 TDIYALGVILYQMLTLSFPYRRKKGRKISYRDVI----LSPIEVAPYREIPPFLSQIAMK 267
Query: 644 -MSPSPSDRPSATELLQDALPPQME 667
++ P++R S+ + L+ L P ++
Sbjct: 268 ALAVDPAERYSSVQELKQDLEPHLQ 292
|
Length = 932 |
| >gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Score = 82.4 bits (203), Expect = 5e-17
Identities = 73/309 (23%), Positives = 124/309 (40%), Gaps = 60/309 (19%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQ 412
L +F + +G G F V LDG A+KK+++ D ++E+ L +L
Sbjct: 1 LANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLN 60
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +V++YY ++ E +N+L
Sbjct: 61 HPNVIKYYASFIE-----------------------------------DNELNIVLELAD 85
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
R ++ + ++ W F Q+ L H+H + ++HRD+ P N+F A +
Sbjct: 86 AGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVV 145
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKA 590
K+GD GL +F F + T VGT +Y +PE E G+ + K+
Sbjct: 146 KLGDLGLGRF-----------FSSKTTAAH----SLVGTPYYMSPERIHENGY---NFKS 187
Query: 591 DMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSP 646
D++SLG + +E L PF L ++ + PP +SE+ L+ ++P
Sbjct: 188 DIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINP 247
Query: 647 SPSDRPSAT 655
P RP T
Sbjct: 248 DPEKRPDIT 256
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267 |
| >gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Score = 83.5 bits (207), Expect = 5e-17
Identities = 60/246 (24%), Positives = 102/246 (41%), Gaps = 47/246 (19%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
++ ++ +G G +G V + G+ A+KKI + R LRE+ L +H ++
Sbjct: 7 YKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNI 66
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ ADF DV Y+ M+
Sbjct: 67 IAIRDI-LRPPGADFK-----------------------DV------------YVVMDLM 90
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L + S +E + Q++ GL +IH +IHRDL P+N+ + +++IGD
Sbjct: 91 ESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGD 150
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FG+A+ L ++ PT+ T V T +Y APE+ P+ DM+S+G
Sbjct: 151 FGMARGL--------SSSPTEHKYFM---TEYVATRWYRAPELLLSLPEYTTAIDMWSVG 199
Query: 597 IVFFEL 602
+F E+
Sbjct: 200 CIFAEM 205
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334 |
| >gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Score = 82.8 bits (205), Expect = 6e-17
Identities = 66/258 (25%), Positives = 109/258 (42%), Gaps = 60/258 (23%)
Query: 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREV 405
R + +FE+L +G G +G V ++ G A+KK+R+ +D +P++ LRE+
Sbjct: 1 GRCRSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERD-GIPISS--LREI 57
Query: 406 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
L L+H ++V + V G L+
Sbjct: 58 TLLLNLRHPNIVELKEV----------------------------------VVG--KHLD 81
Query: 466 STYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 524
S +L MEYC + L + ++ F + L Q++ GL ++H IIHRDL +N+
Sbjct: 82 SIFLV--MEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNL 139
Query: 525 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584
+ +KI DFGLA+ G + T +V T +Y APE+ G
Sbjct: 140 LLTDKGCLKIADFGLAR---------------TYGLPAKPMTPKVVTLWYRAPELLLGCT 184
Query: 585 KIDEKADMYSLGIVFFEL 602
DM+++G + EL
Sbjct: 185 TYTTAIDMWAVGCILAEL 202
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309 |
| >gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 7e-17
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 61/250 (24%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
F++L+ LG G + V +N+ G A+K+I L D +RE++ + L+H+++
Sbjct: 2 FKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHL-DAEEGTPSTAIREISLMKELKHENI 60
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
VR + DV ENKL + EY
Sbjct: 61 VRLH-----------------------------------DVIHTENKLMLVF-----EYM 80
Query: 477 PRTLRQVFESYDH---FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
+ L++ +++ D Q+++G+A H ++HRDL P N+ + R ++K
Sbjct: 81 DKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELK 140
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKADM 592
+ DFGLA+ AF G+ V+ + +V T +Y AP++ G D+
Sbjct: 141 LADFGLAR-----------AF-----GIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDI 184
Query: 593 YSLGIVFFEL 602
+S+G + E+
Sbjct: 185 WSVGCIMAEM 194
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284 |
| >gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 83.0 bits (205), Expect = 1e-16
Identities = 90/351 (25%), Positives = 139/351 (39%), Gaps = 89/351 (25%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
DF ++ +G G FG V L + K G+ YA+K + KS E+ +L H
Sbjct: 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLL---KS---------EMFKKDQLAHV 48
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
R A + DS W + S +S + ++ YLY+ ME
Sbjct: 49 KAERDVLA---------ESDSPW----VVSLYYSFQ--------------DAQYLYLIME 81
Query: 475 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
+ P L + YD F +++ + V + +H G IHRD+ P+NI D IK
Sbjct: 82 FLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIK 141
Query: 534 IGDFGLAK-FLKLEQ-------LDQDAAFPTDTG--GVSVDGT----------------- 566
+ DFGL+ F K L + V+VD
Sbjct: 142 LSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNR 201
Query: 567 -----GQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF--STAME--R 612
VGT Y APEI +QG+ ++ D +SLG + FE W PF + E R
Sbjct: 202 RLMAYSTVGTPDYIAPEIFLQQGY---GQECDWWSLGAIMFECLIGWPPFCSENSHETYR 258
Query: 613 QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS--DRPSATELLQDA 661
+I+ + ++ P + E E L+RRL++ + + R A E+
Sbjct: 259 KII--NWRETLYFPDD-IHLSVEAEDLIRRLITNAENRLGRGGAHEIKSHP 306
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377 |
| >gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 1e-16
Identities = 61/251 (24%), Positives = 96/251 (38%), Gaps = 65/251 (25%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQ 414
D E ++ +G G FG V L ++++ +YA+K + + + L + E L + H
Sbjct: 2 DLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHP 61
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++R + + +LY+ ME
Sbjct: 62 FIIRLFWTEHD----------------------------------------QRFLYMLME 81
Query: 475 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
Y P L + F +IV L ++H + I++RDL P NI D IK
Sbjct: 82 YVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIK 141
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTAPEIEQGWPKIDEKA-D 591
+ DFG AK L D T + GT Y APE+ Q K KA D
Sbjct: 142 LTDFGFAKKL-------------------RDRTWTLCGTPEYLAPEVIQS--KGHNKAVD 180
Query: 592 MYSLGIVFFEL 602
++LGI+ +E+
Sbjct: 181 WWALGILIYEM 191
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291 |
| >gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.6 bits (199), Expect = 2e-16
Identities = 71/303 (23%), Positives = 117/303 (38%), Gaps = 75/303 (24%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHV 416
L+P+ G FG V L K + G ++A+K ++ D K+ N + R + + + +V
Sbjct: 1 LKPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQG-ESPYV 59
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ Y +F ++ YLY+ MEY
Sbjct: 60 AKLY------------------------YSFQSK----------------DYLYLVMEYL 79
Query: 477 P----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
+L + ++ A ++V G+ +H +GIIHRD+ P N+ D +
Sbjct: 80 NGGDCASLIKTL---GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHL 136
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
K+ DFGL++ G + VGT Y APE G D+ +D
Sbjct: 137 KLTDFGLSR----------------NGLENKK---FVGTPDYLAPETILGVGD-DKMSDW 176
Query: 593 YSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFS-EQESLLRRLMSPSP 648
+SLG V FE + PF + + L ++ P S E L+ RL+ P
Sbjct: 177 WSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDP 236
Query: 649 SDR 651
+ R
Sbjct: 237 AKR 239
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260 |
| >gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Score = 81.0 bits (200), Expect = 2e-16
Identities = 90/332 (27%), Positives = 132/332 (39%), Gaps = 87/332 (26%)
Query: 357 FEE-----LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 407
FEE +Q LG G FG V LC+ G AVKK++ + + D RE+
Sbjct: 1 FEERHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQ-HSTAEHLRD-FEREIEI 58
Query: 408 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 467
L LQH ++V+Y GV + +G
Sbjct: 59 LKSLQHDNIVKY------KGVC-------YSAGRRN------------------------ 81
Query: 468 YLYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525
L + MEY P +LR + + D QI +G+ ++ + +HRDL NI
Sbjct: 82 -LRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNIL 140
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585
++ N +KIGDFGL K L P D V G+ ++Y APE K
Sbjct: 141 VESENRVKIGDFGLTKVL-----------PQDKEYYKVREPGESPIFWY-APE-SLTESK 187
Query: 586 IDEKADMYSLGIVFFELW-------HPFSTAMER--------QIV---LSDLKQKGEL-- 625
+D++S G+V +EL+ P + M IV + LK G L
Sbjct: 188 FSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLKNNGRLPA 247
Query: 626 PPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657
PP A E ++++ + PS RPS +EL
Sbjct: 248 PPGCPA---EIYAIMKECWNNDPSQRPSFSEL 276
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284 |
| >gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 81.4 bits (201), Expect = 2e-16
Identities = 84/338 (24%), Positives = 127/338 (37%), Gaps = 83/338 (24%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
++ + +G G +G V + G A+KKI + + RILRE+ L L+H +
Sbjct: 2 YKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDI 61
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V +F +Y+ E
Sbjct: 62 VEIKHIMLPPSRREFKD-----------------------------------IYVVFELM 86
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L QV ++ D E Q++ L +IH + HRDL P NI +A +KI D
Sbjct: 87 ESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICD 146
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDEKADMYSL 595
FGLA+ AF DT ++ T V T +Y APE+ + K D++S+
Sbjct: 147 FGLAR----------VAF-NDTPT-AIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSI 194
Query: 596 GIVFFE-----------------------LWHPFSTAMER------QIVLSDLKQKGELP 626
G +F E L P + R + LS +++K +P
Sbjct: 195 GCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVP 254
Query: 627 PSWVAKFSEQES----LLRRLMSPSPSDRPSATELLQD 660
S KF + LL RL++ P DRP+A E L D
Sbjct: 255 FS--QKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338 |
| >gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Score = 82.1 bits (203), Expect = 2e-16
Identities = 63/249 (25%), Positives = 105/249 (42%), Gaps = 53/249 (21%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
D E +P+G+G FG V + DG+ A+KK+ ++L R+ RE+ L +H +
Sbjct: 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDN 60
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV--TGQENKLESTYLYIQM 473
V+ S+ D+ + E Y+ ++
Sbjct: 61 VL-----------------------------------SALDILQPPHIDPFEEIYVVTEL 85
Query: 474 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
L ++ S + QI+ GL ++H GI+HRD+ P N+ ++ +K
Sbjct: 86 MQS--DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLK 143
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
I DFGLA ++E+ D+ S T +V T +Y APEI G D++
Sbjct: 144 ICDFGLA---RVEEPDE-----------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIW 189
Query: 594 SLGIVFFEL 602
S+G +F EL
Sbjct: 190 SVGCIFAEL 198
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372 |
| >gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 81.3 bits (201), Expect = 3e-16
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 53/252 (21%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR------------ILREVATLSR 410
LG G +G V + L G+ A+KK+++ + S V LRE+ ++
Sbjct: 17 LGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNE 76
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
++H++++ DV + + ++
Sbjct: 77 IKHENIM-----------------------------------GLVDVYVEGD-----FIN 96
Query: 471 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
+ M+ L++V + + + QI+ GL +H +HRDL+P NIF +++
Sbjct: 97 LVMDIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKG 156
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
KI DFGLA+ D +T + T +V T +Y APE+ G K
Sbjct: 157 ICKIADFGLARRYGYPPY-SDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAV 215
Query: 591 DMYSLGIVFFEL 602
DM+S+G +F EL
Sbjct: 216 DMWSVGCIFAEL 227
|
Length = 335 |
| >gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Score = 80.0 bits (198), Expect = 4e-16
Identities = 67/255 (26%), Positives = 113/255 (44%), Gaps = 60/255 (23%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL--KDKSLPVNDRILREVATLS 409
R ++++E+L + G +G V ++K G A+KK+++ + + P+ LRE+ L
Sbjct: 2 RSVDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITS--LREINILL 59
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+LQH ++V E V G ++ +K+
Sbjct: 60 KLQHPNIVTVK----EVVV----GSNL-------------------------DKI----- 81
Query: 470 YIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
Y+ MEY L+ + E+ F + L Q++ G+AH+H I+HRDL +N+ +
Sbjct: 82 YMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNN 141
Query: 529 RNDIKIGDFGLA-KFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
R +KI DFGLA ++ G T V T +Y APE+ G +
Sbjct: 142 RGILKICDFGLAREY----------------GSPLKPYTQLVVTLWYRAPELLLGAKEYS 185
Query: 588 EKADMYSLGIVFFEL 602
DM+S+G +F EL
Sbjct: 186 TAIDMWSVGCIFAEL 200
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293 |
| >gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 80.4 bits (199), Expect = 5e-16
Identities = 62/258 (24%), Positives = 99/258 (38%), Gaps = 71/258 (27%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
++ L +G G +G V +K G A+KKI + R LRE+ L R +H++
Sbjct: 6 RYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQT-FCQRTLREIKILRRFKHEN 64
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
++ D+ + +YI E
Sbjct: 65 IIGIL-----------------------------------DIIRPPSFESFNDVYIVQEL 89
Query: 476 CP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
+ ++ S DH + QI+ GL +IH ++HRDL P+N+ + D
Sbjct: 90 METDLYKLIKTQHLSNDH-----IQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCD 144
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ----VGTYFYTAPEI---EQGWP 584
+KI DFGLA+ E D TG V T +Y APEI +G+
Sbjct: 145 LKICDFGLARIADPEH----------------DHTGFLTEYVATRWYRAPEIMLNSKGYT 188
Query: 585 KIDEKADMYSLGIVFFEL 602
K D++S+G + E+
Sbjct: 189 K---AIDIWSVGCILAEM 203
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336 |
| >gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 6e-16
Identities = 60/241 (24%), Positives = 95/241 (39%), Gaps = 50/241 (20%)
Query: 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 421
P+G G +G V KN A+KKI + R LRE+ L L H++V+
Sbjct: 12 PIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVI---- 67
Query: 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 481
+ D+ ++ +YI E L
Sbjct: 68 -------------------------------AIKDIMPPPHREAFNDVYIVYELMDTDLH 96
Query: 482 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
Q+ S + + Q++ GL +IH ++HRDL P+N+ +A D+KI DFGLA+
Sbjct: 97 QIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLAR 156
Query: 542 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 601
+ F T+ V T +Y APE+ + D++S+G +F E
Sbjct: 157 -----TTSEKGDFMTE----------YVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAE 201
Query: 602 L 602
L
Sbjct: 202 L 202
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337 |
| >gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 79.9 bits (197), Expect = 8e-16
Identities = 61/246 (24%), Positives = 100/246 (40%), Gaps = 54/246 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ L+ +G G +G V +K G A+KK+ +S R RE+ L +QH++V
Sbjct: 17 YTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENV 76
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ + T D F + Y+ M Y
Sbjct: 77 IGLLDVF--TSAVSGDE-------------FQD-------------------FYLVMPYM 102
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L+++ ++ +L Q++ GL +IH GIIHRDL P N+ + ++KI D
Sbjct: 103 QTDLQKIMGH--PLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILD 160
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FGLA+ E TG V T +Y APE+ W ++ D++S+G
Sbjct: 161 FGLARHADAEM------------------TGYVVTRWYRAPEVILNWMHYNQTVDIWSVG 202
Query: 597 IVFFEL 602
+ E+
Sbjct: 203 CIMAEM 208
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342 |
| >gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Score = 78.5 bits (193), Expect = 1e-15
Identities = 83/317 (26%), Positives = 129/317 (40%), Gaps = 76/317 (23%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+E + LG G FG V KNK G A K I K + + D ++ E+ L+ H ++
Sbjct: 14 WEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEE-ELEDYMV-EIEILATCNHPYI 71
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V+ A++ +DG L+I +E+C
Sbjct: 72 VKLLGAFY------WDGK----------------------------------LWIMIEFC 91
Query: 477 PR-TLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
P + + D E + RQ++E L ++H IIHRDL N+ DIK+
Sbjct: 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKL 151
Query: 535 GDFGL-AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-----EQGWPKIDE 588
DFG+ AK +K L + +F +GT ++ APE+ + P D
Sbjct: 152 ADFGVSAKNVK--TLQRRDSF--------------IGTPYWMAPEVVMCETMKDTP-YDY 194
Query: 589 KADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS------WVAKFSEQESLLRR 642
KAD++SLGI E+ E + LK PP+ W +F + L+
Sbjct: 195 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRD---FLKT 251
Query: 643 LMSPSPSDRPSATELLQ 659
+ P RPSA +LL+
Sbjct: 252 ALDKHPETRPSAAQLLE 268
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292 |
| >gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Score = 78.1 bits (192), Expect = 1e-15
Identities = 77/319 (24%), Positives = 132/319 (41%), Gaps = 68/319 (21%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ 412
L +F+ + +G G F V LD + A+KK+++ + ++E+ L +L
Sbjct: 1 LANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLN 60
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +V++Y ++ E + A + D++ Q
Sbjct: 61 HPNVIKYLDSFIEDNELNI----------------VLELADAGDLS-------------Q 91
Query: 473 M-EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
M +Y + R + E W F Q+ + H+H + ++HRD+ P N+F A
Sbjct: 92 MIKYFKKQKRLIPE-------RTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGV 144
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEK 589
+K+GD GL +F + T S+ VGT +Y +PE E G+ + K
Sbjct: 145 VKLGDLGLGRFFSSKT----------TAAHSL-----VGTPYYMSPERIHENGY---NFK 186
Query: 590 ADMYSLGIVFFE---LWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS- 645
+D++SLG + +E L PF L ++ + PP +SE+ LR L+S
Sbjct: 187 SDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCDYPPLPTEHYSEK---LRELVSM 243
Query: 646 ---PSPSDRPSATELLQDA 661
P P RP + Q A
Sbjct: 244 CIYPDPDQRPDIGYVHQIA 262
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267 |
| >gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Score = 77.4 bits (190), Expect = 2e-15
Identities = 75/306 (24%), Positives = 128/306 (41%), Gaps = 62/306 (20%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
F +L+ +G G FG V + + A+K I L++ + D I +E+ LS+ +V
Sbjct: 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYV 64
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+YY ++ L+ T L+I MEY
Sbjct: 65 TKYYGSY----------------------------------------LKDTKLWIIMEYL 84
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
D+ + R+I++GL ++H + IHRD+ N+ ++K+ D
Sbjct: 85 GGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLAD 144
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FG+A L Q+ ++ VGT F+ APE+ + D KAD++SLG
Sbjct: 145 FGVAGQLTDTQIKRNTF---------------VGTPFWMAPEVIKQ-SAYDSKADIWSLG 188
Query: 597 IVFFEL--WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPS 653
I EL P + + VL + + PP+ +S+ + + ++ PS RP+
Sbjct: 189 ITAIELAKGEPPHSELHPMKVLFLIPKNN--PPTLEGNYSKPLKEFVEACLNKEPSFRPT 246
Query: 654 ATELLQ 659
A ELL+
Sbjct: 247 AKELLK 252
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277 |
| >gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 3e-15
Identities = 81/312 (25%), Positives = 127/312 (40%), Gaps = 76/312 (24%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYY 420
LG G +G V ++ A+K+I +D P+++ E+A S L+H+++V+Y
Sbjct: 16 LGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHE----EIALHSYLKHRNIVQY- 70
Query: 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 479
L S E+ + I ME P +
Sbjct: 71 ---------------------LGSD------------------SENGFFKIFMEQVPGGS 91
Query: 480 LRQVFESY--DHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI-KIG 535
L + S D E + +QI+EGL ++H I+HRD+ +N+ + + + KI
Sbjct: 92 LSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKIS 151
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYS 594
DFG +K L G++ GT Y APE I++G AD++S
Sbjct: 152 DFGTSKRL---------------AGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWS 196
Query: 595 LGIVFFELWH---PFSTAMERQIVLSDL---KQKGELPPSWVAKFSEQESLLRRLMSPSP 648
LG E+ PF E Q + + K E+P S A E ++ + R P P
Sbjct: 197 LGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSA---EAKNFILRCFEPDP 253
Query: 649 SDRPSATELLQD 660
R SA +LLQD
Sbjct: 254 DKRASAHDLLQD 265
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268 |
| >gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Score = 78.2 bits (193), Expect = 3e-15
Identities = 70/266 (26%), Positives = 113/266 (42%), Gaps = 60/266 (22%)
Query: 338 SVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV 397
SV+ G ++ RY N L+P+G G G V + + G++ A+KK+ +++
Sbjct: 4 SVEVGDSTFTVLK-RYQN----LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTH 58
Query: 398 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 457
R RE+ + + H++++ +
Sbjct: 59 AKRAYRELVLMKLVNHKNIIGLLNVF---------------------------------- 84
Query: 458 TGQENKLESTYLYIQMEYCPRTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516
T Q++ E +Y+ ME L QV + DH E +L Q++ G+ H+H GIIH
Sbjct: 85 TPQKSLEEFQDVYLVMELMDANLCQVIQMDLDH---ERMSYLLYQMLCGIKHLHSAGIIH 141
Query: 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576
RDL P+NI + +KI DFGLA+ T G S T V T +Y A
Sbjct: 142 RDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVTRYYRA 185
Query: 577 PEIEQGWPKIDEKADMYSLGIVFFEL 602
PE+ G E D++S+G + E+
Sbjct: 186 PEVILGMG-YKENVDIWSVGCIMGEM 210
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353 |
| >gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Score = 76.7 bits (189), Expect = 5e-15
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 56/249 (22%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+E L +G G +G V+ CK+K G+ A+KK + V +RE+ L +L+H+
Sbjct: 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHE 60
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V + +V ++ +L Y+ E
Sbjct: 61 NLV-----------------------------------NLIEVFRRKKRL-----YLVFE 80
Query: 475 YCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
+ T+ E Y + D+ QI+ G+ H IIHRD+ P NI +K
Sbjct: 81 FVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVK 140
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
+ DFG A+ L A P + T V T +Y APE+ G K D++
Sbjct: 141 LCDFGFARTL---------AAPGE------VYTDYVATRWYRAPELLVGDTKYGRAVDIW 185
Query: 594 SLGIVFFEL 602
++G + E+
Sbjct: 186 AVGCLVTEM 194
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286 |
| >gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 77.3 bits (190), Expect = 6e-15
Identities = 59/246 (23%), Positives = 104/246 (42%), Gaps = 53/246 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ +L+ +G G +G V ++ G A+KK+ +S R RE+ L ++H++V
Sbjct: 17 YRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENV 76
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ G+ D T + Y+ M +
Sbjct: 77 I---------GLLDV-------------------------FTPDLSLDRFHDFYLVMPFM 102
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L ++ + ++ ++ L Q+++GL +IH GIIHRDL P N+ + ++KI D
Sbjct: 103 GTDLGKLMK-HEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILD 161
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FGLA+ Q D + TG V T +Y APE+ W + D++S+G
Sbjct: 162 FGLAR-----QTDSEM-------------TGYVVTRWYRAPEVILNWMHYTQTVDIWSVG 203
Query: 597 IVFFEL 602
+ E+
Sbjct: 204 CIMAEM 209
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343 |
| >gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Score = 77.8 bits (191), Expect = 6e-15
Identities = 65/249 (26%), Positives = 104/249 (41%), Gaps = 53/249 (21%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
L ++ L+P+G G G V + + R+ A+KK+ ++ R RE+ + + H
Sbjct: 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 82
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++++ + T Q++ E +YI M
Sbjct: 83 KNIIGLLNVF----------------------------------TPQKSLEEFQDVYIVM 108
Query: 474 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
E L QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +K
Sbjct: 109 ELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLK 166
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
I DFGLA+ T G S T V T +Y APE+ G E D++
Sbjct: 167 ILDFGLAR----------------TAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDIW 209
Query: 594 SLGIVFFEL 602
S+G + E+
Sbjct: 210 SVGCIMGEM 218
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364 |
| >gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Score = 75.1 bits (184), Expect = 1e-14
Identities = 74/307 (24%), Positives = 127/307 (41%), Gaps = 64/307 (20%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
F +L+ +G G FG V + A+K I L++ + D I +E+ LS+ ++
Sbjct: 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPYI 64
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
RYY ++ L+ T L+I MEY
Sbjct: 65 TRYYGSY----------------------------------------LKGTKLWIIMEYL 84
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
++ + R+I++GL ++H + IHRD+ N+ + D+K+ D
Sbjct: 85 GGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLAD 144
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FG+A L Q+ ++ VGT F+ APE+ + D KAD++SLG
Sbjct: 145 FGVAGQLTDTQIKRNTF---------------VGTPFWMAPEVIKQ-SAYDFKADIWSLG 188
Query: 597 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRP 652
I EL P S +++ K PP+ ++S+ + + ++ P RP
Sbjct: 189 ITAIELAKGEPPNSDLHPMRVLFLIPKNS---PPTLEGQYSKPFKEFVEACLNKDPRFRP 245
Query: 653 SATELLQ 659
+A ELL+
Sbjct: 246 TAKELLK 252
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277 |
| >gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Score = 74.5 bits (183), Expect = 2e-14
Identities = 74/316 (23%), Positives = 117/316 (37%), Gaps = 69/316 (21%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSRLQHQHV 416
Q LG G F ++ G AVK++ + V + + +E+ ++RL H H+
Sbjct: 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHI 65
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+R A E F+ W +G S S A V + Y
Sbjct: 66 IRMLGATCEDS--HFNLFVEWMAGGSVSHLLSKYGAFKEAVI--------------INYT 109
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIG 535
Q++ GL+++H IIHRD+ N+ D+ ++I
Sbjct: 110 -----------------------EQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIA 146
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ-VGTYFYTAPEIEQGWPKIDEKADMYS 594
DFG A L AA T G GQ +GT + APE+ +G D++S
Sbjct: 147 DFGAAARL--------AAKGTGAGEFQ----GQLLGTIAFMAPEVLRGEQ-YGRSCDVWS 193
Query: 595 LGIVFFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSE--QESLLRRLMSP 646
+G V E+ W+ + ++ PS S ++ LR L
Sbjct: 194 VGCVIIEMATAKPPWNAEKHSNHLALIFKIASATT--APSIPEHLSPGLRDVTLRCLEL- 250
Query: 647 SPSDRPSATELLQDAL 662
P DRP + ELL+ +
Sbjct: 251 QPEDRPPSRELLKHPV 266
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268 |
| >gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 76.8 bits (189), Expect = 2e-14
Identities = 56/187 (29%), Positives = 91/187 (48%), Gaps = 25/187 (13%)
Query: 480 LRQVFESYDHFDKELAWH----LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
LRQ +S ++ H LF Q++ + H+H + +IHRD+ NI + +K+G
Sbjct: 126 LRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLG 185
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594
DFG +K VS D G GT +Y APEI + P +KADM+S
Sbjct: 186 DFGFSKMY--------------AATVSDDVGRTFCGTPYYVAPEIWRRKP-YSKKADMFS 230
Query: 595 LGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
LG++ +EL PF +++ L + + P ++ E + ++ L+S P R
Sbjct: 231 LGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDPLPPSISP--EMQEIVTALLSSDPKRR 288
Query: 652 PSATELL 658
PS+++LL
Sbjct: 289 PSSSKLL 295
|
Length = 496 |
| >gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 2e-14
Identities = 77/322 (23%), Positives = 127/322 (39%), Gaps = 73/322 (22%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND----RILREVATLSRL 411
F++++ LG G G V L + K G+ +A+K + DK + R+L E L+ L
Sbjct: 2 HFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVL---DKKEMIKRNKVKRVLTEQEILATL 58
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H + Y A F+T TYL +
Sbjct: 59 DHPFLPTLY-ASFQT---------------------------------------ETYLCL 78
Query: 472 QMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
M+YCP R L++ +E+A +++ L ++H GI++RDL P NI
Sbjct: 79 VMDYCPGGELFRLLQRQPGKC--LSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILL 136
Query: 527 DARNDIKIGDFGLAKFLKLE--QLDQDAAFPTDTGGVS-------VDGTGQ-----VGTY 572
I + DF L+K +E + + + V+ + VGT
Sbjct: 137 HESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTE 196
Query: 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW 629
Y APE+ G D ++LGI+ +E+ + PF + + + LK++ P S
Sbjct: 197 EYIAPEVISGDGH-GSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSP 255
Query: 630 VAKFSEQESLLRRLMSPSPSDR 651
S L+R+L+ PS R
Sbjct: 256 -PVSSSARDLIRKLLVKDPSKR 276
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316 |
| >gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 81/331 (24%), Positives = 129/331 (38%), Gaps = 97/331 (29%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND----RILREVATLSR 410
+D E ++ LG G +G V ++ G AVK+IR VN R+L ++ R
Sbjct: 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRAT-----VNSQEQKRLLMDLDISMR 55
Query: 411 LQH-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+ V +Y A F G DV
Sbjct: 56 SVDCPYTVTFYGALFREG----------------------------DV------------ 75
Query: 470 YIQMEYCPRTL----RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNI 524
+I ME +L ++V++ +++ + IV+ L ++H + +IHRD+ P+N+
Sbjct: 76 WICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNV 135
Query: 525 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE---IEQ 581
+ +K+ DFG++ +L D SV T G Y APE E
Sbjct: 136 LINRNGQVKLCDFGISGYL------------VD----SVAKTIDAGCKPYMAPERINPEL 179
Query: 582 GWPKIDEKADMYSLGIVFFEL---------WH-PFSTAMERQIVLSDLKQKGELPPSWVA 631
D K+D++SLGI EL W PF LKQ E P +
Sbjct: 180 NQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPF----------QQLKQVVEEPSPQLP 229
Query: 632 --KFSEQ-ESLLRRLMSPSPSDRPSATELLQ 659
KFS + + + + + + +RP+ ELLQ
Sbjct: 230 AEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283 |
| >gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 75.2 bits (185), Expect = 2e-14
Identities = 84/309 (27%), Positives = 125/309 (40%), Gaps = 86/309 (27%)
Query: 360 LQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRI--LREVATLSRLQHQ 414
L+ LG G FG V L + G+ YA+K LK +L V DR+ E L+ + H
Sbjct: 1 LKVLGQGSFGKVFLVRKITGPDAGQLYAMKV--LKKATLKVRDRVRTKMERDILAEVNHP 58
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM- 473
+V+ + A F+T E KL YL +
Sbjct: 59 FIVKLHYA-FQT----------------------------------EGKL---YLILDFL 80
Query: 474 ---EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
+ R ++V F +E ++ L H+H GII+RDL P NI D
Sbjct: 81 RGGDLFTRLSKEVM-----FTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEG 135
Query: 531 DIKIGDFGLAKFLKLEQLDQDA---AFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPK 585
IK+ DFGL+K E +D + +F GT Y APE+ +G
Sbjct: 136 HIKLTDFGLSK----ESIDHEKKAYSF--------------CGTVEYMAPEVVNRRGH-- 175
Query: 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642
+ AD +S G++ FE+ PF ++ + LK K +P E +SLLR
Sbjct: 176 -TQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQFLSP---EAQSLLRA 231
Query: 643 LMSPSPSDR 651
L +P++R
Sbjct: 232 LFKRNPANR 240
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318 |
| >gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 4e-14
Identities = 71/314 (22%), Positives = 132/314 (42%), Gaps = 62/314 (19%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQH 415
+E ++ +G G +G V NK +G AVK + D +++ I E L L H +
Sbjct: 20 WEIIETIGKGTYGKVFKVLNKKNGSKAAVK---ILDPIHDIDEEIEAEYNILKALSDHPN 76
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
VV++Y +++ V + GD +W L + S D+
Sbjct: 77 VVKFYGMYYKKDVKN--GDQLWLVLELCN------GGSVTDL------------------ 110
Query: 476 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
++ + + ++ + ++ + + GL H+H IHRD+ NNI +K+
Sbjct: 111 ----VKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLV 166
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDEKAD 591
DFG++ L +L ++ + VGT F+ APE+ +Q D + D
Sbjct: 167 DFGVSAQLTSTRLRRNTS---------------VGTPFWMAPEVIACEQQLDSTYDARCD 211
Query: 592 MYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS------WVAKFSEQESLLRRLMS 645
++SLGI EL + + + K PP+ W +F++ +R+ ++
Sbjct: 212 VWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFND---FIRKCLT 268
Query: 646 PSPSDRPSATELLQ 659
RP+ ++LLQ
Sbjct: 269 KDYEKRPTVSDLLQ 282
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286 |
| >gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein | Back alignment and domain information |
|---|
Score = 77.2 bits (190), Expect = 4e-14
Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 21/207 (10%)
Query: 461 ENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 519
+ L+ EY P RTLR+V + L Q+++ LA H QGI+HRDL
Sbjct: 46 SGEAPPGLLFAVFEYVPGRTLREVLAADGALPAGETGRLMLQVLDALACAHNQGIVHRDL 105
Query: 520 TPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576
P NI K+ DFG+ L + D D A T T V +GT Y A
Sbjct: 106 KPQNIMVSQTGVRPHAKVLDFGIGTLLPGVR-DADVATLTRTTEV-------LGTPTYCA 157
Query: 577 PEIEQGWPKIDEKADMYSLGIVFFELW--HPFSTAMERQIVLSDLKQKGELP---PSWVA 631
PE +G P + +D+Y+ G++F E +L +Q + P W+A
Sbjct: 158 PEQLRGEP-VTPNSDLYAWGLIFLECLTGQRVVQGASVAEIL--YQQLSPVDVSLPPWIA 214
Query: 632 KFSEQESLLRRLMSPSPSDRPSATELL 658
+ +LR+ ++ P R ++ L
Sbjct: 215 GHPLGQ-VLRKALNKDPRQRAASAPAL 240
|
This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266 |
| >gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Score = 74.7 bits (183), Expect = 5e-14
Identities = 69/271 (25%), Positives = 114/271 (42%), Gaps = 60/271 (22%)
Query: 332 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 391
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 1 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53
Query: 392 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 451
++ R RE+ + + H++++ +
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVF---------------------------- 85
Query: 452 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511
T Q++ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 86 ------TPQKSLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 137
Query: 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
GIIHRDL P+NI + +KI DFGLA+ T G S T V T
Sbjct: 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TAGTSFMMTPYVVT 181
Query: 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
+Y APE+ G E D++S+G + E+
Sbjct: 182 RYYRAPEVILGM-GYKENVDIWSVGCIMGEM 211
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355 |
| >gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Score = 74.1 bits (182), Expect = 5e-14
Identities = 60/194 (30%), Positives = 86/194 (44%), Gaps = 37/194 (19%)
Query: 469 LYIQMEYCPRTLRQVFESYDHFDKE------LAWHLFRQIVEGLAHIHGQGIIHRDLTPN 522
LY+ +EY E + H ++E A +I L H+H QGII+RDL P
Sbjct: 75 LYLILEYLSGG-----ELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPE 129
Query: 523 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ- 581
NI DA+ +K+ DFGL K E + + T GT Y APEI
Sbjct: 130 NILLDAQGHVKLTDFGLCK----ESIHEGTVTHT-----------FCGTIEYMAPEILMR 174
Query: 582 -GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE 637
G K D +SLG + +++ PF+ ++ + LK K LPP E
Sbjct: 175 SGHGK---AVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPPYLT---PEAR 228
Query: 638 SLLRRLMSPSPSDR 651
LL++L+ +PS R
Sbjct: 229 DLLKKLLKRNPSSR 242
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323 |
| >gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Score = 73.7 bits (181), Expect = 6e-14
Identities = 77/325 (23%), Positives = 129/325 (39%), Gaps = 97/325 (29%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR---ILREVATLSRLQH 413
F +L+ +GHG FG V ++ A+KK+ K N++ I++EV L +L+H
Sbjct: 17 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQQLRH 74
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+ + Y + L ++ M
Sbjct: 75 PNTIEYKGCY----------------------------------------LREHTAWLVM 94
Query: 474 EYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
EYC + + E + + E+A + ++GLA++H IHRD+ NI
Sbjct: 95 EYCLGSASDILEVHKKPLQEVEIA-AICHGALQGLAYLHSHERIHRDIKAGNILLTEPGT 153
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKID 587
+K+ DFG A + P ++ VGT ++ APE+ ++G + D
Sbjct: 154 VKLADFGSASLVS----------PANSF---------VGTPYWMAPEVILAMDEG--QYD 192
Query: 588 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGEL-------PPS-----WVAKFSE 635
K D++SLGI EL ER+ L ++ L P+ W F
Sbjct: 193 GKVDVWSLGITCIEL-------AERKPPLFNMNAMSALYHIAQNDSPTLSSNDWSDYFRN 245
Query: 636 -QESLLRRLMSPSPSDRPSATELLQ 659
+S L+++ P DRPS+ ELL+
Sbjct: 246 FVDSCLQKI----PQDRPSSEELLK 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307 |
| >gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Score = 74.1 bits (183), Expect = 6e-14
Identities = 50/193 (25%), Positives = 82/193 (42%), Gaps = 47/193 (24%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
Q+++ L +IH +IHRDL P+NI ++ +K+ DFGLA+ L +L+++ P
Sbjct: 115 QLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLAR--SLSELEENPENP----- 167
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----------------- 603
T V T +Y APEI G + + DM+S+G + E+
Sbjct: 168 ---VLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEK 224
Query: 604 -----------------HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646
PF+ M + K EL P + LL++L+
Sbjct: 225 IIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPK---ASDDALDLLKKLLVF 281
Query: 647 SPSDRPSATELLQ 659
+P+ R +A E L+
Sbjct: 282 NPNKRLTAEEALE 294
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337 |
| >gnl|CDD|238396 cd00773, HisRS-like_core, Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 6e-14
Identities = 40/174 (22%), Positives = 71/174 (40%), Gaps = 14/174 (8%)
Query: 725 DTELRDYVVQVTKEMFRQHCAK-----HLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLEL 779
+ LR Y+ +E+F ++ + E ++L + + + GG L L
Sbjct: 1 EAALRRYIEDTLREVFERYGYEEIDTPVFEYTELFLRKSGDEVSKEMYRFKDKGGRDLAL 60
Query: 780 SHELRLPFIRWAISNQKS---SFKRYEISSVYRR---AIGHSPPNRYLQGDFDIIGGASA 833
+L P R N S K Y I V+R G + Q +IIG S
Sbjct: 61 RPDLTAPVARAVAENLLSLPLPLKLYYIGPVFRYERPQKGR--YREFYQVGVEIIGSDSP 118
Query: 834 LTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELL 887
L +AEV+ + ++I+ + I +NH +L+ I + E+ E++ + L
Sbjct: 119 LADAEVIALAVEILEALG-LKDFQIKINHRGILDGIAGLLEDREEYIERLIDKL 171
|
HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain. Length = 261 |
| >gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.7 bits (178), Expect = 8e-14
Identities = 65/245 (26%), Positives = 107/245 (43%), Gaps = 57/245 (23%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSRLQHQHVVR 418
LG G FG V LC + GR AVK++ ++ S VN + E+ L L+H +V+
Sbjct: 10 LGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVN-ALECEIQLLKNLRHDRIVQ 68
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
YY G L E KL I +EY P
Sbjct: 69 YY-------------------GCLRDPE--------------EKKLS-----IFVEYMPG 90
Query: 479 -TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 537
+++ ++Y + + RQI++G++++H I+HRD+ NI D+ ++K+GDF
Sbjct: 91 GSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDF 150
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597
G +K ++ + TG SV GT ++ +PE+ G KAD++S+
Sbjct: 151 GASKRIQ-------TICMSGTGIKSV-----TGTPYWMSPEVISG-EGYGRKADVWSVAC 197
Query: 598 VFFEL 602
E+
Sbjct: 198 TVVEM 202
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264 |
| >gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 9e-14
Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 60/271 (22%)
Query: 332 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 391
SQF+ SV ++ L +++L+P+G G G V + + G + AVKK+
Sbjct: 5 SQFY--SVQVADSTFTV-----LKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRP 57
Query: 392 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 451
++ R RE+ L + H++++ +
Sbjct: 58 FQNQTHAKRAYRELVLLKCVNHKNIISLLNVF---------------------------- 89
Query: 452 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511
T Q++ E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 90 ------TPQKSLEEFQDVYLVMELMDANLCQVI--HMELDHERMSYLLYQMLCGIKHLHS 141
Query: 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
GIIHRDL P+NI + +KI DFGLA+ T + T V T
Sbjct: 142 AGIIHRDLKPSNIVVKSDCTLKILDFGLAR----------------TACTNFMMTPYVVT 185
Query: 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
+Y APE+ G E D++S+G + EL
Sbjct: 186 RYYRAPEVILGM-GYKENVDIWSVGCIMGEL 215
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359 |
| >gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 73.9 bits (181), Expect = 9e-14
Identities = 65/246 (26%), Positives = 103/246 (41%), Gaps = 53/246 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 19 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 78
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ G+ D F+ A S + E +Y+
Sbjct: 79 I---------GLLD---------------VFT--PARSLE--------EFNDVYLVTHLM 104
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L + + D + + L QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 105 GADLNNIVKCQKLTDDHVQF-LIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 163
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FGLA+ E TG V T +Y APEI W ++ D++S+G
Sbjct: 164 FGLARHTDDEM------------------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 205
Query: 597 IVFFEL 602
+ EL
Sbjct: 206 CIMAEL 211
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345 |
| >gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 73.6 bits (181), Expect = 1e-13
Identities = 71/260 (27%), Positives = 103/260 (39%), Gaps = 68/260 (26%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDR--ILREVATLSRL 411
DF+ L +G GG+G V L K K G A+K R+K L +N+ +L E L+
Sbjct: 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALK--RMKKSLLFKLNEVRHVLTERDILTTT 58
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+ + +V+ A F D YLY+
Sbjct: 59 KSEWLVKLLYA--------FQDDE--------------------------------YLYL 78
Query: 472 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
MEY P R + + ++ A ++ E + +H G IHRDL P N DA
Sbjct: 79 AMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASG 138
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
IK+ DFGL+K G V+ VG+ Y APE+ +G D
Sbjct: 139 HIKLTDFGLSK-----------------GIVTY-ANSVVGSPDYMAPEVLRG-KGYDFTV 179
Query: 591 DMYSLGIVFFEL---WHPFS 607
D +SLG + +E + PFS
Sbjct: 180 DYWSLGCMLYEFLCGFPPFS 199
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333 |
| >gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Score = 72.4 bits (178), Expect = 1e-13
Identities = 81/322 (25%), Positives = 125/322 (38%), Gaps = 79/322 (24%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
LND E L +G G G V + K G AVK++R N RIL ++ + H
Sbjct: 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVL-KSH 71
Query: 414 Q--HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
++V+ Y + + D D ++I
Sbjct: 72 DCPYIVKCYGYF----ITDSD------------------------------------VFI 91
Query: 472 QMEY----CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFF 526
ME + L+++ +++ + IV+ L ++ G+IHRD+ P+NI
Sbjct: 92 CMELMSTCLDKLLKRI---QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILL 148
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE---IEQGW 583
DA ++K+ DFG++ L D S T G Y APE
Sbjct: 149 DASGNVKLCDFGISGRL------------VD----SKAKTRSAGCAAYMAPERIDPPDPN 192
Query: 584 PKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKG--ELPPSWVAKFSEQ-E 637
PK D +AD++SLGI EL P+ VL+ + Q+ LPP+ FS
Sbjct: 193 PKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPN--EGFSPDFC 250
Query: 638 SLLRRLMSPSPSDRPSATELLQ 659
S + ++ RP ELLQ
Sbjct: 251 SFVDLCLTKDHRKRPKYRELLQ 272
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296 |
| >gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Score = 72.8 bits (178), Expect = 1e-13
Identities = 74/328 (22%), Positives = 129/328 (39%), Gaps = 78/328 (23%)
Query: 339 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 398
VD G P L E +G G G V + + K GR AVK + L+ +
Sbjct: 14 VDQGDPRSLL---------ENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQR--R 62
Query: 399 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 458
+ + EV + QHQ+VV Y+++ +
Sbjct: 63 ELLFNEVVIMRDYQHQNVVEMYKSY---------------------------------LV 89
Query: 459 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518
G+E L++ ME+ S ++E + +++ L ++H QG+IHRD
Sbjct: 90 GEE-------LWVLMEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRD 142
Query: 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578
+ ++I +K+ DFG Q+ +D VGT ++ APE
Sbjct: 143 IKSDSILLTLDGRVKLSDFGFCA-----QISKDVP----------KRKSLVGTPYWMAPE 187
Query: 579 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSE 635
+ P E D++SLGI+ E+ P+ + + +K+ + PP + +
Sbjct: 188 VISRTPYGTE-VDIWSLGIMVIEMVDGEPPYFS----DSPVQAMKRLRDSPPPKLKNAHK 242
Query: 636 QESLLR----RLMSPSPSDRPSATELLQ 659
+LR R+++ P +R +A ELL
Sbjct: 243 ISPVLRDFLERMLTREPQERATAQELLD 270
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297 |
| >gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 72/332 (21%), Positives = 131/332 (39%), Gaps = 93/332 (28%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QH 413
FE ++ +G G +G V ++K G+ A+K + + + + I E L + H
Sbjct: 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDE---EEEIKEEYNILRKYSNH 62
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++ +Y A+ + + G +++L ++ M
Sbjct: 63 PNIATFYGAFIK-----------------------------KNPPGNDDQL-----WLVM 88
Query: 474 EYCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525
E C + LR+ + +E ++ R+ + GLA++H +IHRD+ NI
Sbjct: 89 ELCGGGSVTDLVKGLRKKGKR---LKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNIL 145
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQ 581
++K+ DFG++ L +T +GT ++ APE+ EQ
Sbjct: 146 LTKNAEVKLVDFGVSAQLDSTLGR------RNTF---------IGTPYWMAPEVIACDEQ 190
Query: 582 GWPKIDEKADMYSLGIVFFEL---------WHPFSTAMERQIVLSD---LKQKGELPPSW 629
D ++D++SLGI EL HP +I + LK P +W
Sbjct: 191 PDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALF--KIPRNPPPTLKS----PENW 244
Query: 630 VAKFSE--QESLLRRLMSPSPSDRPSATELLQ 659
KF++ E L++ + RP ELL+
Sbjct: 245 SKKFNDFISECLIK-----NYEQRPFMEELLE 271
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275 |
| >gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Score = 72.8 bits (178), Expect = 2e-13
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 53/246 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
++ L P+G G +G V + + AVKK+ +SL R RE+ L ++H++V
Sbjct: 17 YQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENV 76
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ G L T + T EN E +Y+
Sbjct: 77 I----------------------GLLDVFTPA---------TSIENFNE---VYLVTNLM 102
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L + + D+ + + L Q++ GL +IH GIIHRDL P+N+ + +++I D
Sbjct: 103 GADLNNIVKCQKLSDEHVQF-LIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILD 161
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FGLA+ Q D + TG V T +Y APEI W ++ D++S+G
Sbjct: 162 FGLAR-----QADDEM-------------TGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 203
Query: 597 IVFFEL 602
+ EL
Sbjct: 204 CIMAEL 209
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343 |
| >gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Score = 71.7 bits (176), Expect = 2e-13
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 488 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ 547
+HF + +IV L H+H GII+RD+ NI D+ + + DFGL+K E+
Sbjct: 100 EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE 159
Query: 548 LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA-DMYSLGIVFFELW--- 603
++ +F GT Y APE+ +G +KA D +SLG++ FEL
Sbjct: 160 EERAYSF--------------CGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGA 205
Query: 604 HPFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
PF+ E+ +I LK K P + A E +++L+ P R
Sbjct: 206 SPFTVDGEQNSQSEISRRILKSKPPFPKTMSA---EARDFIQKLLEKDPKKR 254
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288 |
| >gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 72.3 bits (178), Expect = 2e-13
Identities = 66/264 (25%), Positives = 104/264 (39%), Gaps = 74/264 (28%)
Query: 357 FEELQPLGHGGFGHVVLCKNK--LDGRHYAVKKIR-LKDKSLPVNDRILREVATLSRLQH 413
+E +G G +G V K K DG+ YA+KK + K++ ++ RE+A L L+H
Sbjct: 2 YEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKH 61
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++VV + F A S +Y+
Sbjct: 62 ENVVSLVEV------------------------FLEHADKS--------------VYLLF 83
Query: 474 EYCPRTLRQVFESYDHFD---------KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 524
+Y L Q+ + + K L W QI+ G+ ++H ++HRDL P NI
Sbjct: 84 DYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLW----QILNGVHYLHSNWVLHRDLKPANI 139
Query: 525 F----FDARNDIKIGDFGLAKFLK--LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578
R +KIGD GLA+ L+ L D V T +Y APE
Sbjct: 140 LVMGEGPERGVVKIGDLGLARLFNAPLKPL--------------ADLDPVVVTIWYRAPE 185
Query: 579 IEQGWPKIDEKADMYSLGIVFFEL 602
+ G + D++++G +F EL
Sbjct: 186 LLLGARHYTKAIDIWAIGCIFAEL 209
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316 |
| >gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Score = 71.0 bits (174), Expect = 3e-13
Identities = 46/156 (29%), Positives = 73/156 (46%), Gaps = 23/156 (14%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
QI+ GL H+H + I++RDL P N+ D +++I D GLA LK +
Sbjct: 103 QIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK-------KI---- 151
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS 617
G+ GT Y APE+ QG D D ++LG +E+ PF + ++
Sbjct: 152 -----KGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCTLYEMIAGRSPFR-QRKEKVEKE 204
Query: 618 DLKQKG-ELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 651
+LK++ E+ + KFS + + L L+ P R
Sbjct: 205 ELKRRTLEMAVEYPDKFSPEAKDLCEALLQKDPEKR 240
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 70.8 bits (174), Expect = 7e-13
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 24/158 (15%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
Q++EG+ ++H I+HRD+ NI D + +KI DFGLA+ GG
Sbjct: 123 QLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLARPYD----GPPPNPKGGGGG 178
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLK 620
+ T V T +Y PE+ G + D++ +G VF E++ R+ + L+
Sbjct: 179 GTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMF-------TRRPI---LQ 228
Query: 621 QKGELPPSWVAKFSEQESLLRRLM-SPSPSDRPSATEL 657
K ++ +Q L+ +L +P+ P L
Sbjct: 229 GKSDI---------DQLHLIFKLCGTPTEETWPGWRSL 257
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 70.4 bits (172), Expect = 7e-13
Identities = 61/251 (24%), Positives = 111/251 (44%), Gaps = 59/251 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQ 412
+ + +L+ LG G + V ++KL A+K+IRL+ ++ P +REV+ L L+
Sbjct: 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCT--AIREVSLLKDLK 62
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H ++V TL ++++ L +
Sbjct: 63 HANIV-----------------------TLHDIVHTDKS-----------------LTLV 82
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
EY + L+Q + + +F QI+ GLA+ H + ++HRDL P N+ + R +
Sbjct: 83 FEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGE 142
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+K+ DFGLA+ + PT T + +V T +Y P++ G + + D
Sbjct: 143 LKLADFGLAR---------AKSVPTKT------YSNEVVTLWYRPPDVLLGSSEYSTQID 187
Query: 592 MYSLGIVFFEL 602
M+ +G +FFE+
Sbjct: 188 MWGVGCIFFEM 198
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309 |
| >gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Score = 69.9 bits (171), Expect = 8e-13
Identities = 71/313 (22%), Positives = 125/313 (39%), Gaps = 75/313 (23%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSRLQHQHVVR 418
LG G +G V C G+ AVK++ L + +++ EV L L+H ++V+
Sbjct: 8 LGKGAYG-TVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQ 66
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
Y GT L+ + I ME+ P
Sbjct: 67 YL-------------------GTC---------------------LDDNTISIFMEFVPG 86
Query: 479 -TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 537
++ + + + + +QI++G+A++H ++HRD+ NN+ IK+ DF
Sbjct: 87 GSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDF 146
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGT------GQVGTYFYTAPEI--EQGWPKIDEK 589
G A+ L V + GT GT ++ APE+ E G+ + K
Sbjct: 147 GCARRLAW---------------VGLHGTHSNMLKSMHGTPYWMAPEVINESGYGR---K 188
Query: 590 ADMYSLGIVFFEL--WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE-SLLRRLMSP 646
+D++S+G FE+ P +M+R + + L P FS + ++
Sbjct: 189 SDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTR 248
Query: 647 SPSDRPSATELLQ 659
+RPSA +LL+
Sbjct: 249 DQHERPSALQLLR 261
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265 |
| >gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Score = 70.8 bits (173), Expect = 9e-13
Identities = 76/300 (25%), Positives = 120/300 (40%), Gaps = 70/300 (23%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
DFE L+ +G G FG V L + K G YA+K ILR+ L + Q H
Sbjct: 2 DFESLKVIGRGAFGEVRLVQKKDTGHVYAMK--------------ILRKADMLEKEQVGH 47
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+ E DS+W S ++KL LY+ ME+
Sbjct: 48 IRAERDILVE-------ADSLWVVKMFYSF---------------QDKLN---LYLIMEF 82
Query: 476 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
P + + D +E + V + IH G IHRD+ P+N+ D++ +K+
Sbjct: 83 LPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKL 142
Query: 535 GDFGLAKFLKLEQLDQ-----DAAFPTDTGGVSVDGT---------------GQVGTYFY 574
DFGL LK + + + P+D +++ VGT Y
Sbjct: 143 SDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDY 202
Query: 575 TAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF--STAMERQIVLSDLKQKGELPP 627
APE+ + G+ K+ D +SLG++ +E+ + PF T E + + K+ PP
Sbjct: 203 IAPEVFMQTGYNKL---CDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP 259
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363 |
| >gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 70.0 bits (171), Expect = 9e-13
Identities = 61/251 (24%), Positives = 106/251 (42%), Gaps = 59/251 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQ 412
L + +L LG G + V ++KL A+K+IRL+ ++ P +REV+ L L+
Sbjct: 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCT--AIREVSLLKDLK 62
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H ++V + D+ E L +
Sbjct: 63 HANIVTLH-----------------------------------DIIHTEKSLTLVF---- 83
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFR-QIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
EY + L+Q + + LF Q++ GL + H + ++HRDL P N+ + R +
Sbjct: 84 -EYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGE 142
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+K+ DFGLA+ + PT T + +V T +Y P+I G + D
Sbjct: 143 LKLADFGLAR---------AKSIPTKT------YSNEVVTLWYRPPDILLGSTDYSTQID 187
Query: 592 MYSLGIVFFEL 602
M+ +G +F+E+
Sbjct: 188 MWGVGCIFYEM 198
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301 |
| >gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Score = 70.5 bits (173), Expect = 1e-12
Identities = 64/251 (25%), Positives = 101/251 (40%), Gaps = 54/251 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNK--LDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQ- 412
+E ++ LG G +G V +N + A+KKI + K + + R LRE+ L +
Sbjct: 2 YELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKI-LAKRALRELKLLRHFRG 60
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H+++ Y D D ++ YLY +
Sbjct: 61 HKNITCLY-----------DMDIVFPGN-----------------------FNELYLYEE 86
Query: 473 -MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
ME L Q+ S QI+ GL +IH ++HRDL P N+ +A +
Sbjct: 87 LMEA---DLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCE 143
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+KI DFGLA+ F + G + T V T +Y APEI + + D
Sbjct: 144 LKICDFGLAR-----------GFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAID 192
Query: 592 MYSLGIVFFEL 602
++S+G + EL
Sbjct: 193 VWSVGCILAEL 203
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332 |
| >gnl|CDD|234586 PRK00037, hisS, histidyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Score = 71.3 bits (176), Expect = 1e-12
Identities = 89/429 (20%), Positives = 147/429 (34%), Gaps = 128/429 (29%)
Query: 772 HGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYR--RAIGHSP-PNRY---LQGDF 825
GG L L E P +R I ++ FK Y I ++R R P RY Q
Sbjct: 72 KGGRSLTLRPEGTAPVVRAVIEHKLQPFKLYYIGPMFRYER-----PQKGRYRQFHQFGV 126
Query: 826 DIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAE 885
++IG S L +AEV+ + D+L+A+ G+K + +
Sbjct: 127 EVIGSDSPLADAEVIALAA-------------------DILKAL----GLK-GLKLLINS 162
Query: 886 LLAMMGSLRPQSSEWKSKWVVIR---RQLLQEL------NLAEAVVNRLQTVGLR----- 931
L G IR R+ L L E RL+T LR
Sbjct: 163 L----GDF------------EIRANYRKALVGFLEKGLDELDEDSKRRLETNPLRILDKK 206
Query: 932 --FCGAADQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNL 987
+ P+L L D+ +++ +EL L I Y +
Sbjct: 207 DKEDQELLKDAPKLLDYL--DEESKEHFEELKELLDALGIP--------------YVIDP 250
Query: 988 F------------FQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNP 1035
F+ + GT+ GGRYD L+ + P
Sbjct: 251 RLVRGLDYYTGTVFEFVTDDLGAQ-----GTVCG-GGRYDGLVEQF-----------GGP 293
Query: 1036 P-SGVGASLALETII---QHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1091
P VG ++ +E ++ + E V V G L ++L +L
Sbjct: 294 PTPAVGFAIGVERLLLLLEE--------LGEEPVDVYVVPLGEDAEL-AALKLAEKLRAA 344
Query: 1092 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1151
I+ + + L +Q++YA + + ++IL + G V V+ L +++ V + L
Sbjct: 345 GIRVE-LDYGGRKLKKQFKYADKSGARFVLILGEDELANGTVTVKDLRTGEQQTVPLDEL 403
Query: 1152 VRFLLDAIA 1160
V L + +A
Sbjct: 404 VEALKELLA 412
|
Length = 412 |
| >gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 1e-12
Identities = 74/316 (23%), Positives = 124/316 (39%), Gaps = 85/316 (26%)
Query: 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR----LKDKSLPVNDRILREV 405
SS L+DFE + LG G FG V + K+K G +YA+K ++ LK K + + +E
Sbjct: 13 SSWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQV---QHVAQEK 69
Query: 406 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
+ L L H +V ++ + EN++
Sbjct: 70 SILMELSHPFIVNMMCSFQD-----------------------------------ENRV- 93
Query: 466 STYLYIQMEYCPRTLRQVFESYDH------FDKELAWHLFRQIVEGLAHIHGQGIIHRDL 519
Y +E+ E + H F ++A ++V ++H + II+RDL
Sbjct: 94 ----YFLLEFVVGG-----ELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDL 144
Query: 520 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579
P N+ D + +K+ DFG AK + D F GT Y APE+
Sbjct: 145 KPENLLLDNKGHVKVTDFGFAKKVP------DRTFTL------------CGTPEYLAPEV 186
Query: 580 EQGWPKIDEKA-DMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSE 635
Q K KA D +++G++ +E + PF +I L + + P+W
Sbjct: 187 IQS--KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKF-PNWFD--GR 241
Query: 636 QESLLRRLMSPSPSDR 651
L++ L+ + R
Sbjct: 242 ARDLVKGLLQTDHTKR 257
|
Length = 329 |
| >gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Score = 70.6 bits (173), Expect = 1e-12
Identities = 51/181 (28%), Positives = 86/181 (47%), Gaps = 43/181 (23%)
Query: 497 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 556
+ RQI+ G+A++H + I+HRD+ P+N+ ++ ++KI DFG+++ L + +D P
Sbjct: 172 DVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILA-QTMD-----PC 225
Query: 557 DTGGVSVDGTGQVGTYFYTAPE-----IEQGWPKIDEKA-DMYSLGIVFFELW---HPFS 607
++ VGT Y +PE + G D A D++SLG+ E + PF
Sbjct: 226 NS---------SVGTIAYMSPERINTDLNHG--AYDGYAGDIWSLGVSILEFYLGRFPF- 273
Query: 608 TAMERQ---------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658
+ RQ I +S Q E P + +F + + P+ R SA +LL
Sbjct: 274 -GVGRQGDWASLMCAICMS---QPPEAPATASREF---RHFISCCLQREPAKRWSAMQLL 326
Query: 659 Q 659
Q
Sbjct: 327 Q 327
|
Length = 353 |
| >gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 68.8 bits (168), Expect = 2e-12
Identities = 71/259 (27%), Positives = 103/259 (39%), Gaps = 67/259 (25%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 407
RYL ++++ LG G FG V L N G AVK ++ ++ +E+
Sbjct: 4 RYL---KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLK-RECGQQNTSGWKKEINI 59
Query: 408 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 467
L L H+++V+Y G G
Sbjct: 60 LKTLYHENIVKY------KGCCSEQGGKG------------------------------- 82
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIF 525
L + MEY P +LR + +L LF +QI EG+A++H Q IHRDL N+
Sbjct: 83 -LQLIMEYVPLGSLRDYLPKHKLNLAQLL--LFAQQICEGMAYLHSQHYIHRDLAARNVL 139
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPT--DTGGVSVDGTGQVGTYFYTAPEIEQGW 583
D +KIGDFGLAK A P + V DG V F+ A E +
Sbjct: 140 LDNDRLVKIGDFGLAK-----------AVPEGHEYYRVREDGDSPV---FWYAVECLKEN 185
Query: 584 PKIDEKADMYSLGIVFFEL 602
K +D++S G+ +EL
Sbjct: 186 -KFSYASDVWSFGVTLYEL 203
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283 |
| >gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 68.6 bits (168), Expect = 2e-12
Identities = 62/251 (24%), Positives = 109/251 (43%), Gaps = 59/251 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQ 412
L +++L LG G + V ++KL G+ A+K+IRL+ ++ P +RE + L L+
Sbjct: 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFT--AIREASLLKDLK 61
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H ++V TL D+ + L T ++
Sbjct: 62 HANIV-----------------------TLH------------DIIHTKKTL--TLVF-- 82
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFR-QIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
EY L+Q + LF Q++ GLA+ H + ++HRDL P N+ R +
Sbjct: 83 -EYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGE 141
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+K+ DFGLA+ + P+ T + +V T +Y P++ G + D
Sbjct: 142 LKLADFGLAR---------AKSVPSKT------YSNEVVTLWYRPPDVLLGSTEYSTSLD 186
Query: 592 MYSLGIVFFEL 602
M+ +G +F+E+
Sbjct: 187 MWGVGCIFYEM 197
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291 |
| >gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Score = 68.9 bits (168), Expect = 2e-12
Identities = 82/329 (24%), Positives = 129/329 (39%), Gaps = 66/329 (20%)
Query: 342 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 401
G ++ P+ + +E ++ +G G +G V NK DG AVK + D V++ I
Sbjct: 13 GLESLGDPT----DTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKIL---DPISDVDEEI 65
Query: 402 LREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 460
E L L H +VV++Y +++ G +W L
Sbjct: 66 EAEYNILQSLPNHPNVVKFYGMFYKAD--KLVGGQLWLVLELC----------------- 106
Query: 461 ENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520
N T L + C + L + SY + L GL H+H IIHRD+
Sbjct: 107 -NGGSVTELVKGLLICGQRLDEAMISYILYGALL----------GLQHLHNNRIIHRDVK 155
Query: 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI- 579
NNI +K+ DFG++ L +L ++ + VGT F+ APE+
Sbjct: 156 GNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTS---------------VGTPFWMAPEVI 200
Query: 580 --EQGWP-KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS------WV 630
EQ + D + D++SLGI EL + V + K PP+ W
Sbjct: 201 ACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWC 260
Query: 631 AKFSEQESLLRRLMSPSPSDRPSATELLQ 659
F+ + + + RPS T LL+
Sbjct: 261 RSFNH---FISQCLIKDFEARPSVTHLLE 286
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291 |
| >gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 69.5 bits (170), Expect = 3e-12
Identities = 43/135 (31%), Positives = 60/135 (44%), Gaps = 29/135 (21%)
Query: 468 YLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
Y Y+ P + Q A + +QI+EGL ++H Q IIHRD+ NIF +
Sbjct: 144 YTYLTKRSRPLPIDQ------------ALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN 191
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
+ + IGD G A+F P G GT APE+ K +
Sbjct: 192 DVDQVCIGDLGAAQF--------PVVAPAF--------LGLAGTVETNAPEV-LARDKYN 234
Query: 588 EKADMYSLGIVFFEL 602
KAD++S GIV FE+
Sbjct: 235 SKADIWSAGIVLFEM 249
|
Length = 357 |
| >gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 3e-12
Identities = 84/344 (24%), Positives = 134/344 (38%), Gaps = 73/344 (21%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
+G G FG V + K R YA+K + K V + EVA H +
Sbjct: 1 IGKGTFGQVYQVRKKDTRRIYAMKVL---SKKEIVAKK---EVA--------HTIGERNI 46
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY-CPRTLR 481
T + + S + FS + S LY+ +Y L
Sbjct: 47 LVRTLLDE--------SPFIVGLKFSFQTDSD--------------LYLVTDYMSGGELF 84
Query: 482 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
+ F ++ A ++V L H+H I++RDL P NI DA I + DFGL+K
Sbjct: 85 WHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSK 144
Query: 542 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGWPKIDEKADMYSLGIV 598
L + T+T GT Y APE+ E+G+ K D +SLG++
Sbjct: 145 ----ANLTDNKT--TNTF---------CGTTEYLAPEVLLDEKGYTK---HVDFWSLGVL 186
Query: 599 FFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR---- 651
FE+ W PF +Q+ + K P + ++ E ++ L++ +P R
Sbjct: 187 VFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKNVLS--DEGRQFVKGLLNRNPQHRLGAH 244
Query: 652 PSATELLQDALPPQMEYELLDNIL------RMMHSSEDTSIYDK 689
A EL + ++++LL ++ S ED S +D
Sbjct: 245 RDAVELKEHPFFADIDWDLLSKKQITPPFKPIVDSDEDVSNFDP 288
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330 |
| >gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 3e-12
Identities = 76/305 (24%), Positives = 117/305 (38%), Gaps = 59/305 (19%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQH 415
F + + LG GGFG V C+ + G+ YA K++ K K L E L ++ Q
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQF 61
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
VV A +ET A ++ G L ++ G E L+ E
Sbjct: 62 VVNLAYA-YETKDALCLVLTIMNGGDLKFHIYN---------MGNPGFEEERALFYAAEI 111
Query: 476 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
GL +H + ++RDL P NI D I+I
Sbjct: 112 LC---------------------------GLEDLHRENTVYRDLKPENILLDDYGHIRIS 144
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
D GLA +K+ + G S+ G+VGT Y APE+ + D + L
Sbjct: 145 DLGLA--VKIPE------------GESI--RGRVGTVGYMAPEVLNN-QRYTLSPDYWGL 187
Query: 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 651
G + +E+ PF E+ ++ E + AKFSE+ +S+ + L++ P R
Sbjct: 188 GCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQR 247
Query: 652 PSATE 656
E
Sbjct: 248 LGCQE 252
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285 |
| >gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Score = 68.5 bits (167), Expect = 4e-12
Identities = 73/281 (25%), Positives = 110/281 (39%), Gaps = 80/281 (28%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVK----KIRLKDKSLPVNDRILREVATLSR-LQHQHVV 417
+G G FG V+L K K DG YAVK K LK K + I+ E L + L+H +V
Sbjct: 3 IGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKE---QNHIMAERNVLLKNLKHPFLV 59
Query: 418 RYYQAWFETG-----VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
+ + F+T V D+ V G E + ++Q
Sbjct: 60 GLHYS-FQTAEKLYFVLDY-------------------------VNGGE-----LFFHLQ 88
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
E C R F + ++ + ++H II+RDL P NI D++ +
Sbjct: 89 RERCFLEPRARFYA-------------AEVASAIGYLHSLNIIYRDLKPENILLDSQGHV 135
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV--GTYFYTAPEIEQGWPKIDEKA 590
+ DFGL K GV + T GT Y APE+ + P D
Sbjct: 136 VLTDFGLCK-----------------EGVEPEETTSTFCGTPEYLAPEVLRKEP-YDRTV 177
Query: 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS 628
D + LG V +E+ + PF + Q+ + L + +LP
Sbjct: 178 DWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLPGG 218
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321 |
| >gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Score = 68.1 bits (166), Expect = 4e-12
Identities = 75/303 (24%), Positives = 116/303 (38%), Gaps = 65/303 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQH 415
F + + LG GGFG V C+ + G+ YA KK+ K K L E L ++ +
Sbjct: 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRF 61
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
VV A +ET A ++ G L + A
Sbjct: 62 VVSLAYA-YETKDALCLVLTLMNGGDLKFHIYHMGEAG---------------------- 98
Query: 476 CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
F++ A +I GL +H + I++RDL P NI D I+I
Sbjct: 99 --------------FEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRIS 144
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
D GLA + Q + G+VGT Y APE+ + + D ++L
Sbjct: 145 DLGLAVHVPEGQTIK----------------GRVGTVGYMAPEVVKN-ERYTFSPDWWAL 187
Query: 596 GIVFFEL---WHPFST---AMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSP 648
G + +E+ PF ++R+ V +K E+ + KFS SL + L+ P
Sbjct: 188 GCLLYEMIAGQSPFQQRKKKIKREEVERLVK---EVQEEYSEKFSPDARSLCKMLLCKDP 244
Query: 649 SDR 651
+R
Sbjct: 245 KER 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285 |
| >gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Score = 67.8 bits (166), Expect = 4e-12
Identities = 77/323 (23%), Positives = 119/323 (36%), Gaps = 80/323 (24%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND-----RILREVATLS 409
D ++L +G G FG V +K G AVK+IR D R+L ++ +
Sbjct: 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRS------TVDEKEQKRLLMDLDVVM 57
Query: 410 RLQH-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
R ++V++Y A F G W L +
Sbjct: 58 RSSDCPYIVKFYGALFREGDC-------WICMELMDISLDK------------------- 91
Query: 469 LYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFF 526
Y + V+E +E+ + V+ L ++ + IIHRD+ P+NI
Sbjct: 92 FY----------KYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILL 141
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE--IEQGWP 584
D +IK+ DFG++ L D S+ T G Y APE
Sbjct: 142 DRNGNIKLCDFGISGQL------VD----------SIAKTRDAGCRPYMAPERIDPSARD 185
Query: 585 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQ--KGE---LPPSWVAKFS-E 635
D ++D++SLGI +E+ P+ V L Q KG+ L S +FS
Sbjct: 186 GYDVRSDVWSLGITLYEVATGKFPYPKWNS---VFDQLTQVVKGDPPILSNSEEREFSPS 242
Query: 636 QESLLRRLMSPSPSDRPSATELL 658
+ + + S RP ELL
Sbjct: 243 FVNFINLCLIKDESKRPKYKELL 265
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288 |
| >gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Score = 67.7 bits (165), Expect = 5e-12
Identities = 56/250 (22%), Positives = 107/250 (42%), Gaps = 58/250 (23%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
N FE L +G G +G V+ C++K A+KK + +++ V + LRE+ L L+ +
Sbjct: 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQE 60
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V +A+ G LY+ E
Sbjct: 61 NIVELKEAFRRRG----------------------------------------KLYLVFE 80
Query: 475 YCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
Y + + ++ E + +++ +++ Q+++ + H I+HRD+ P N+ + +
Sbjct: 81 YVEKNMLELLEEMPNGVPPEKVRSYIY-QLIKAIHWCHKNDIVHRDIKPENLLISHNDVL 139
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
K+ DFG A+ L + G + + T V T +Y +PE+ G P + DM
Sbjct: 140 KLCDFGFARNL--------------SEGSNANYTEYVATRWYRSPELLLGAP-YGKAVDM 184
Query: 593 YSLGIVFFEL 602
+S+G + EL
Sbjct: 185 WSVGCILGEL 194
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287 |
| >gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Score = 67.9 bits (166), Expect = 6e-12
Identities = 58/190 (30%), Positives = 88/190 (46%), Gaps = 27/190 (14%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
+L+ MEY L +S FD+ A +I+ GL +H +GII+RDL +N+
Sbjct: 70 HLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLL 129
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586
D IKI DFG+ K E ++ + T GT Y APEI +G K
Sbjct: 130 DKDGHIKIADFGMCK----ENMNGEGKAST-----------FCGTPDYIAPEILKG-QKY 173
Query: 587 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLR 641
+E D +S G++ +E+ PF E ++ S L + P P W++K E + L
Sbjct: 174 NESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN---DRPHFPRWISK--EAKDCLS 228
Query: 642 RLMSPSPSDR 651
+L P+ R
Sbjct: 229 KLFERDPTKR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316 |
| >gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Score = 67.4 bits (164), Expect = 6e-12
Identities = 60/254 (23%), Positives = 107/254 (42%), Gaps = 65/254 (25%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQ 412
L + +L LG G + V ++KL A+K+IRL+ ++ P +REV+ L L+
Sbjct: 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCT--AIREVSLLKNLK 61
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H ++V TL + R L +
Sbjct: 62 HANIV-----------------------TLHDIIHTERC-----------------LTLV 81
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
EY L+Q D+ ++ H + Q++ GL++ H + I+HRDL P N+ +
Sbjct: 82 FEYLDSDLKQYL---DNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINE 138
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
+ ++K+ DFGLA+ + PT T + +V T +Y P++ G +
Sbjct: 139 KGELKLADFGLAR---------AKSVPTKT------YSNEVVTLWYRPPDVLLGSTEYST 183
Query: 589 KADMYSLGIVFFEL 602
DM+ +G + +E+
Sbjct: 184 PIDMWGVGCILYEM 197
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288 |
| >gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 67.5 bits (165), Expect = 6e-12
Identities = 75/319 (23%), Positives = 127/319 (39%), Gaps = 78/319 (24%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
D E + LG G G V K+ G A K + + KS V +ILRE+ + + +
Sbjct: 6 DLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKS-SVRKQILRELQIMHECRSPY 64
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V +Y A+ L + + ME+
Sbjct: 65 IVSFYGAF----------------------------------------LNENNICMCMEF 84
Query: 476 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIK 533
+L ++++ E+ + +VEGL +++ I+HRD+ P+NI ++R IK
Sbjct: 85 MDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIK 144
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPKIDEKAD 591
+ DFG++ G ++ VGT Y +PE QG K K+D
Sbjct: 145 LCDFGVS-------------------GELINSIADTFVGTSTYMSPERIQG-GKYTVKSD 184
Query: 592 MYSLGIVFFELW---HPFSTAMER------QIVLSDLKQK--GELPPSWVA-KFSEQ-ES 638
++SLGI EL PF+ + + + DL Q+ E PP + F E
Sbjct: 185 VWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDFPEDLRD 244
Query: 639 LLRRLMSPSPSDRPSATEL 657
+ + P++RP+ +L
Sbjct: 245 FVDACLLKDPTERPTPQQL 263
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284 |
| >gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 6e-12
Identities = 80/331 (24%), Positives = 131/331 (39%), Gaps = 73/331 (22%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQH 415
F +L+ +GHG FG V ++ A+KK+ K S I++EV L R++H +
Sbjct: 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPN 86
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+ Y + A ++ MEY
Sbjct: 87 SIEYKGCYLREHTA----------------------------------------WLVMEY 106
Query: 476 CPRTLRQVFESYDHFDKELAWHLFRQ-IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
C + + E + +E+ ++GLA++H +IHRD+ NI +K+
Sbjct: 107 CLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKL 166
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDEKA 590
DFG A A P ++ VGT ++ APE+ ++G + D K
Sbjct: 167 ADFGSASI----------ASPANSF---------VGTPYWMAPEVILAMDEG--QYDGKV 205
Query: 591 DMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPS 647
D++SLGI EL P M L + Q E P ++S+ + + +
Sbjct: 206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPTLQSNEWSDYFRNFVDSCLQKI 264
Query: 648 PSDRPSATELLQD--ALPPQMEYELLDNILR 676
P DRP++ ELL+ L + E L+D I R
Sbjct: 265 PQDRPTSEELLKHMFVLRERPETVLIDLIQR 295
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317 |
| >gnl|CDD|213530 TIGR00442, hisS, histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 68.6 bits (169), Expect = 6e-12
Identities = 94/452 (20%), Positives = 157/452 (34%), Gaps = 106/452 (23%)
Query: 725 DTELRDYVVQVTKEMFRQHCAKHLEIE-PMYLLGDCPQFKRNT------VK-----LLTH 772
+ Y+ + +E+F + K EI P+ F R V+
Sbjct: 13 EMIKWQYIEETIREVFELYGFK--EIRTPI--FEYTELFARKVGEETDIVEKEMYTFKDK 68
Query: 773 GGDLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIGHSPP--NRY---LQGD 824
GG L L E P R I N FK Y I ++R + P RY Q
Sbjct: 69 GGRSLTLRPEGTAPVARAVIENKLLLPKPFKLYYIGPMFR----YERPQKGRYRQFHQFG 124
Query: 825 FDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVA 884
++IG S L +AE++ + +I+ + + +N +LE E+RE +
Sbjct: 125 VEVIGSDSPLADAEIIALAAEILKA-LGIKDFTLEINSLGILEGR-------LEYREALL 176
Query: 885 ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF--CGA-ADQAL- 940
L + L +L E V RL+ LR Q L
Sbjct: 177 RYL---------------------DKHLDKLG--EDSVRRLEKNPLRILDSKNEKIQELL 213
Query: 941 ---PRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIE---------SYHRNLF 988
P++ L + +R +EL +DAL P Y+
Sbjct: 214 KEAPKILDFLDEE--SRAHFEELKE---------LLDALGIPYVIDPSLVRGLDYYTGTV 262
Query: 989 FQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPP-SGVGASLALET 1047
F+ + + A +G++ GGRYD L+ + PP VG ++ +E
Sbjct: 263 FEFVT--DGLGA---QGSICG-GGRYDGLVEEL-----------GGPPTPAVGFAIGIER 305
Query: 1048 IIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTE 1107
++ E+ V V G L E ++L +L + I+ + L +
Sbjct: 306 LLLLLEELGLLPPEESSPDVYVVPLGEEAEL-EALKLAQKLRKAGIRVEVDLGGR-KLKK 363
Query: 1108 QYEYASEHDIKCLVILTDTGAQKGLVKVRHLD 1139
Q +YA + + VI+ + G V ++ L
Sbjct: 364 QLKYADKLGARFAVIIGEDELANGTVTLKDLR 395
|
This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff [Protein synthesis, tRNA aminoacylation]. Length = 397 |
| >gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Score = 67.0 bits (164), Expect = 1e-11
Identities = 55/187 (29%), Positives = 87/187 (46%), Gaps = 23/187 (12%)
Query: 469 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
L+ MEY L + FD+ A +IV GL +H +GII+RDL +N+ D
Sbjct: 71 LFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD 130
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
+ IKI DFG+ K E + GGV+ + GT Y APEI P
Sbjct: 131 SEGHIKIADFGMCK----EGI---------LGGVTT--STFCGTPDYIAPEILSYQP-YG 174
Query: 588 EKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644
D ++LG++ +E+ PF E + + + + P W++K E +S+L+ +
Sbjct: 175 PAVDWWALGVLLYEMLAGQSPFEGDDEDE-LFQSILEDEVRYPRWLSK--EAKSILKSFL 231
Query: 645 SPSPSDR 651
+ +P R
Sbjct: 232 TKNPEKR 238
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318 |
| >gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Score = 67.0 bits (163), Expect = 1e-11
Identities = 74/314 (23%), Positives = 125/314 (39%), Gaps = 75/314 (23%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR---ILREVATLSRLQH 413
F +L+ +GHG FG V ++ + A+KK+ K N++ I++EV L +L+H
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQKLRH 74
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+ ++Y + A ++ M
Sbjct: 75 PNTIQYRGCYLREHTA----------------------------------------WLVM 94
Query: 474 EYCPRTLRQVFESYDHFDKELAWHLFRQ-IVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
EYC + + E + +E+ ++GLA++H +IHRD+ NI +
Sbjct: 95 EYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLV 154
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDE 588
K+GDFG A + P + VGT ++ APE+ ++G + D
Sbjct: 155 KLGDFGSASIMA----------PANXF---------VGTPYWMAPEVILAMDEG--QYDG 193
Query: 589 KADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMS 645
K D++SLGI EL P M L + Q E P +SE + + +
Sbjct: 194 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-ESPALQSGHWSEYFRNFVDSCLQ 252
Query: 646 PSPSDRPSATELLQ 659
P DRP++ LL+
Sbjct: 253 KIPQDRPTSEVLLK 266
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308 |
| >gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Score = 66.9 bits (163), Expect = 1e-11
Identities = 48/171 (28%), Positives = 78/171 (45%), Gaps = 18/171 (10%)
Query: 488 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ 547
D+F ++ +I+ L H+H GI++RD+ NI D+ + + DFGL+K E+
Sbjct: 100 DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE 159
Query: 548 LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---H 604
++ +F GT Y APEI +G + D +SLGI+ FEL
Sbjct: 160 KERTYSF--------------CGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGAS 205
Query: 605 PFSTAMERQIVLSDLKQKGELPPSWVAKFS-EQESLLRRLMSPSPSDRPSA 654
PF+ ER ++ + P + + E + LL +L+ P R A
Sbjct: 206 PFTLEGERNTQSEVSRRILKCDPPFPSFIGPEAQDLLHKLLRKDPKKRLGA 256
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332 |
| >gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Score = 66.3 bits (161), Expect = 2e-11
Identities = 59/252 (23%), Positives = 110/252 (43%), Gaps = 63/252 (25%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQH 413
+ +E+L+ LG G + V K+K++G+ A+K IRL+++ P +RE + L L+H
Sbjct: 5 DSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFT--AIREASLLKGLKH 62
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V + D+ + L + Y+
Sbjct: 63 ANIVLLH-----------------------------------DIIHTKETLTLVFEYVHT 87
Query: 474 EYCPRTLRQVFESYD---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
+ C Q + + H + + LF Q++ GL++IH + I+HRDL P N+
Sbjct: 88 DLC-----QYMDKHPGGLHPEN-VKLFLF-QLLRGLSYIHQRYILHRDLKPQNLLISDTG 140
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
++K+ DFGLA+ + P+ T + +V T +Y P++ G +
Sbjct: 141 ELKLADFGLAR---------AKSVPSHT------YSNEVVTLWYRPPDVLLGSTEYSTCL 185
Query: 591 DMYSLGIVFFEL 602
DM+ +G +F E+
Sbjct: 186 DMWGVGCIFVEM 197
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303 |
| >gnl|CDD|214735 smart00591, RWD, domain in RING finger and WD repeat containing proteins and DEXDc-like helicases subfamily related to the UBCc domain | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 2e-11
Identities = 30/75 (40%), Positives = 38/75 (50%), Gaps = 2/75 (2%)
Query: 2 GYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVM 61
ED VS L V+ YP + P + + +GL+ LL L++ A N G VM
Sbjct: 35 EGEDQYVSLTLQVKLPENYPDEAPPISLLNSEGLSDEQLAELLKKLEEIAEEN--LGEVM 92
Query: 62 IFNLVEAAQEFLSEI 76
IF LVE QEFLSE
Sbjct: 93 IFELVEKLQEFLSEF 107
|
Length = 107 |
| >gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Score = 65.9 bits (161), Expect = 2e-11
Identities = 79/327 (24%), Positives = 129/327 (39%), Gaps = 90/327 (27%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
DFE+L LG G G V ++ G A K I L+ K + ++I+RE+ L +
Sbjct: 2 DFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKP-AIRNQIIRELKVLHECNSPY 60
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V +Y A++ DG+ + I ME+
Sbjct: 61 IVGFYGAFYS------DGE----------------------------------ISICMEH 80
Query: 476 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 533
+L QV + + + + ++ GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 81 MDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIK 140
Query: 534 IGDFGLAKFLKLEQLDQDA-AFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
+ DFG++ L +D A +F VGT Y +PE QG ++D+
Sbjct: 141 LCDFGVSGQL----IDSMANSF--------------VGTRSYMSPERLQG-THYTVQSDI 181
Query: 593 YSLGIVFFELWH-----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647
+SLG+ E+ P A E + + +GE S R +S
Sbjct: 182 WSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKES------------HRPVSGH 229
Query: 648 PSDRPSATELLQDALPPQMEYELLDNI 674
P D P P +ELLD I
Sbjct: 230 PPDSP----------RPMAIFELLDYI 246
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308 |
| >gnl|CDD|177776 PLN00181, PLN00181, protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Score = 67.8 bits (165), Expect = 2e-11
Identities = 68/260 (26%), Positives = 121/260 (46%), Gaps = 37/260 (14%)
Query: 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE 485
+GV++F D GS +L+ + R+ + G + L+ + +E +LRQ +
Sbjct: 16 SGVSEFCTD---GSKSLSHIDYV-RSLLGSHKEGNLDGLDDDSIVRALECEDVSLRQWLD 71
Query: 486 SYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTP--------NNIFF---------- 526
+ D D +H+FRQIVE + H QGI+ ++ P N++ F
Sbjct: 72 NPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSG 131
Query: 527 -DARNDIKIGDFGLAKF------LKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579
D K + G ++ ++E+L++ P + + +YT+PE
Sbjct: 132 SDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILA-----MEMSWYTSPEE 186
Query: 580 EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639
+ G + +D+Y LG++ FEL+ P S+ E+ +S L+ + LPP + + ++ S
Sbjct: 187 DNG-SSSNCASDVYRLGVLLFELFCPVSSREEKSRTMSSLRHR-VLPPQILLNWPKEASF 244
Query: 640 LRRLMSPSPSDRPSATELLQ 659
L+ P PS RPS +ELLQ
Sbjct: 245 CLWLLHPEPSCRPSMSELLQ 264
|
Length = 793 |
| >gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 3e-11
Identities = 75/332 (22%), Positives = 130/332 (39%), Gaps = 95/332 (28%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQ-HQHVVRYY 420
+G G F V+ +++ G++YA+K ++ KSL VN+ LRE+ L RL H +++R
Sbjct: 7 IGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNN--LREIQALRRLSPHPNILRLI 64
Query: 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 480
+ F D G L E + Y I +
Sbjct: 65 EVLF---------DRKTGRLALVF----------------ELMDMNLYELI------KGR 93
Query: 481 RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 540
++ ++ Q+++ L H+H GI HRD+ P NI + +K+ DFG
Sbjct: 94 KR------PLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSC 146
Query: 541 KFLKLEQLDQDAAFPTDTGGVSVDG--TGQVGTYFYTAPE--IEQGWPKIDEKADMYSLG 596
+ G+ T + T +Y APE + G+ K D++++G
Sbjct: 147 R------------------GIYSKPPYTEYISTRWYRAPECLLTDGY--YGPKMDIWAVG 186
Query: 597 IVFFEL--WHP-FSTAME-RQI-------------VLSDLKQKGEL-------PPSWVAK 632
VFFE+ P F E QI VL ++ + + + K
Sbjct: 187 CVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRK 246
Query: 633 F-----SEQESLLRRLMSPSPSDRPSATELLQ 659
+E LL++L++ P +R +A + L+
Sbjct: 247 LLPNASAEGLDLLKKLLAYDPDERITAKQALR 278
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282 |
| >gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Score = 65.3 bits (159), Expect = 3e-11
Identities = 51/167 (30%), Positives = 79/167 (47%), Gaps = 22/167 (13%)
Query: 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 549
F + A QI+ GL H+H + II+RDL P N+ D +++I D GLA LK Q
Sbjct: 94 FPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ-- 151
Query: 550 QDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF 606
+ T G + GT + APE+ QG + D D ++LG+ +E+ PF
Sbjct: 152 ------SKTKGYA-------GTPGFMAPELLQG-EEYDFSVDYFALGVTLYEMIAARGPF 197
Query: 607 STAMERQIVLSDLKQKG-ELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 651
E+ + +LKQ+ ++ KFS +S L++ P R
Sbjct: 198 RARGEK-VENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKR 243
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280 |
| >gnl|CDD|238436 cd00859, HisRS_anticodon, HisRS Histidyl-anticodon binding domain | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 4e-11
Identities = 27/92 (29%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 1064 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVIL 1123
V V G G L E +EL +L + IKA+ L +Q++YA + VIL
Sbjct: 1 EVDVYVVPLGEG-ALSEALELAEQLRDAGIKAEIDYG-GRKLKKQFKYADRSGARFAVIL 58
Query: 1124 TDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1155
+ G+V V+ L+ +++ V + LV L
Sbjct: 59 GEDELAAGVVTVKDLETGEQETVALDELVEEL 90
|
HisRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. Length = 91 |
| >gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Score = 65.4 bits (159), Expect = 5e-11
Identities = 77/315 (24%), Positives = 119/315 (37%), Gaps = 70/315 (22%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+DFE L+ +G G FG V L + K G YA+K ILR+ L + Q
Sbjct: 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMK--------------ILRKADMLEKEQVA 46
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
H+ E D W S F ++ LY+ ME
Sbjct: 47 HIRAERDILVE-------ADGAWVVKMFYS--FQDKRN----------------LYLIME 81
Query: 475 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
+ P + + D +E + V + IH G IHRD+ P+N+ DA+ +K
Sbjct: 82 FLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVK 141
Query: 534 IGDFGLAKFLKLEQLDQ-----------DAAFPTDTGGVSVD---------GTGQVGTYF 573
+ DFGL LK + D +F + VGT
Sbjct: 142 LSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPD 201
Query: 574 YTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF--STAMERQIVLSDLKQKGELP 626
Y APE+ + G+ K+ D +SLG++ +E+ + PF T E + + K+ P
Sbjct: 202 YIAPEVFMQTGYNKL---CDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFP 258
Query: 627 PSWVAKFSEQESLLR 641
P ++ +LR
Sbjct: 259 PEVPISEKAKDLILR 273
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360 |
| >gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Score = 65.2 bits (159), Expect = 5e-11
Identities = 64/263 (24%), Positives = 102/263 (38%), Gaps = 63/263 (23%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
DF+ +G G FG V + + K G YA+K + K L L +
Sbjct: 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVM--KKSVL---------------LAQE 43
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
V + + + D + S ++ Q+ LY+ ME
Sbjct: 44 TVSFFEE----------ERDIL--------SISNSPWIPQLQYAFQDKD----NLYLVME 81
Query: 475 YCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
Y P L + Y D FD+++A ++V + +H G +HRD+ P N+ D I
Sbjct: 82 YQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHI 141
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ---GWPK--ID 587
K+ DFG A +L + V+ VGT Y APE+ G K
Sbjct: 142 KLADFGSAA-----RLTANK---------MVNSKLPVGTPDYIAPEVLTTMNGDGKGTYG 187
Query: 588 EKADMYSLGIVFFELWH---PFS 607
+ D +SLG++ +E+ + PF
Sbjct: 188 VECDWWSLGVIAYEMIYGRSPFH 210
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330 |
| >gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 5e-11
Identities = 66/314 (21%), Positives = 128/314 (40%), Gaps = 69/314 (21%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRLQH 413
DFE +Q +G G +G V +N G A+K I+L+ P D + +E+ + +H
Sbjct: 10 DFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLE----PGEDFAVVQQEIIMMKDCKH 65
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V Y+ ++ D +W I M
Sbjct: 66 SNIVAYFGSYLRR-------DKLW---------------------------------ICM 85
Query: 474 EYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
E+C +L+ ++ + ++ R+ ++GL ++H +G +HRD+ NI +
Sbjct: 86 EFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHV 145
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDEKA 590
K+ DFG++ + + + +F +GT ++ APE+ K ++
Sbjct: 146 KLADFGVSAQIT-ATIAKRKSF--------------IGTPYWMAPEVAAVERKGGYNQLC 190
Query: 591 DMYSLGIVFFEL--WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES---LLRRLMS 645
D++++GI EL P + L + + PP K S ++ ++
Sbjct: 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALT 250
Query: 646 PSPSDRPSATELLQ 659
+P RP+A +LLQ
Sbjct: 251 KNPKKRPTAEKLLQ 264
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267 |
| >gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.5 bits (157), Expect = 5e-11
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 27/169 (15%)
Query: 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 549
FD+E A +I GL +H + I++RDL P NI D I+I D GLA + +
Sbjct: 99 FDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI 158
Query: 550 QDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF 606
+ G+VGT Y APE+ + + D + LG + +E+ PF
Sbjct: 159 R----------------GRVGTVGYMAPEVVKN-ERYTFSPDWWGLGCLIYEMIEGKSPF 201
Query: 607 STAME---RQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 651
E R+ V +K E + KFSE S+ R+L++ P R
Sbjct: 202 RQRKEKVKREEVERRVK---EDQEEYSEKFSEAARSICRQLLTKDPGFR 247
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285 |
| >gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Score = 65.0 bits (158), Expect = 5e-11
Identities = 74/317 (23%), Positives = 117/317 (36%), Gaps = 81/317 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR---ILREVATLSRLQH 413
F L +GHG FG V N AVKK+ K N++ I++EV L +L+H
Sbjct: 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQT--NEKWQDIIKEVKFLQQLKH 80
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+ + Y + + A ++ M
Sbjct: 81 PNTIEYKGCYLKEHTA----------------------------------------WLVM 100
Query: 474 EYCPRTLRQVFESYDHFDKELAWHLFRQ-IVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
EYC + + E + +E+ ++GLA++H +IHRD+ NI +
Sbjct: 101 EYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQV 160
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDE 588
K+ DFG A S VGT ++ APE+ ++G + D
Sbjct: 161 KLADFGSAS-------------------KSSPANSFVGTPYWMAPEVILAMDEG--QYDG 199
Query: 589 KADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPP----SWVAKFSEQESLLRR 642
K D++SLGI EL P M L + Q + P W F +
Sbjct: 200 KVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN-DSPTLQSNEWTDSF---RGFVDY 255
Query: 643 LMSPSPSDRPSATELLQ 659
+ P +RP++ ELL+
Sbjct: 256 CLQKIPQERPASAELLR 272
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313 |
| >gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Score = 64.7 bits (157), Expect = 6e-11
Identities = 76/335 (22%), Positives = 129/335 (38%), Gaps = 77/335 (22%)
Query: 339 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 398
V G P YL+ F ++ G G G V + K G+ AVKK+ L+ +
Sbjct: 15 VSPGDPR------EYLDSFIKI---GEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR--R 63
Query: 399 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 458
+ + EV + H++VV Y ++ GD +W
Sbjct: 64 ELLFNEVVIMRDYHHENVVDMYNSYLV-------GDELW--------------------- 95
Query: 459 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518
+ ME+ ++ ++E + ++ L+++H QG+IHRD
Sbjct: 96 ------------VVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRD 143
Query: 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578
+ ++I + IK+ DFG + E + + VGT ++ APE
Sbjct: 144 IKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSL---------------VGTPYWMAPE 188
Query: 579 IEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES 638
+ P E D++SLGI+ E+ + + + + LPP V + S
Sbjct: 189 VISRLPYGTE-VDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPR-VKDSHKVSS 246
Query: 639 LLRR----LMSPSPSDRPSATELLQD-----ALPP 664
+LR ++ PS R +A ELLQ A PP
Sbjct: 247 VLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPP 281
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292 |
| >gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 6e-11
Identities = 62/265 (23%), Positives = 94/265 (35%), Gaps = 86/265 (32%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ + +G G FG V+L G+ AVK LKD S L E + ++ L+H
Sbjct: 5 SKELKLGATIGKGEFGDVML--GDYRGQKVAVKC--LKDDSTAA-QAFLAEASVMTTLRH 59
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V+ GV G+ LYI
Sbjct: 60 PNLVQL------LGVV-LQGNP---------------------------------LYIVT 79
Query: 474 EYCP--------RTL-RQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNN 523
EY R+ R V F + EG+ ++ + +HRDL N
Sbjct: 80 EYMAKGSLVDYLRSRGRAVITLAQQ-------LGFALDVCEGMEYLEEKNFVHRDLAARN 132
Query: 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQG 582
+ K+ DFGLAK Q D+G + V +TAPE + +
Sbjct: 133 VLVSEDLVAKVSDFGLAKEASQGQ---------DSGKLPVK---------WTAPEALREK 174
Query: 583 WPKIDEKADMYSLGIVFFELWHPFS 607
K K+D++S GI+ LW +S
Sbjct: 175 --KFSTKSDVWSFGIL---LWEIYS 194
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256 |
| >gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 6e-11
Identities = 51/157 (32%), Positives = 70/157 (44%), Gaps = 26/157 (16%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+I+ GL H+H + +++RDL P NI D ++I D GLA D P
Sbjct: 105 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP----- 152
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF---STAMERQI 614
VGT+ Y APE+ Q D AD +SLG + F+L PF T + +I
Sbjct: 153 -----HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207
Query: 615 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
L ELP S+ E +SLL L+ S R
Sbjct: 208 DRMTLTVNVELPDSFS---PELKSLLEGLLQRDVSKR 241
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279 |
| >gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Score = 63.9 bits (156), Expect = 7e-11
Identities = 41/168 (24%), Positives = 61/168 (36%), Gaps = 49/168 (29%)
Query: 384 AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLA 443
AVK ++ DK + D L+E A + L H++++R Y GV
Sbjct: 27 AVKCLK-SDKLSDIMDDFLKEAAIMHSLDHENLIRLY------GVV-------------- 65
Query: 444 SSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-----TLRQVFESYDHFDKELAWHL 498
VT E P LR+ ++ HF
Sbjct: 66 ------LTHPLMMVT---------------ELAPLGSLLDRLRK--DALGHFLISTLCDY 102
Query: 499 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE 546
QI G+ ++ + IHRDL NI + + +KIGDFGL + L
Sbjct: 103 AVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQN 150
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257 |
| >gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Score = 64.3 bits (156), Expect = 1e-10
Identities = 80/308 (25%), Positives = 132/308 (42%), Gaps = 78/308 (25%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+DFE ++ +G G FG V + K K R YA+K + + +L+ T + +
Sbjct: 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWE--------MLKRAETACFREER 52
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+V+ +GD W T F + EN YLY+ M+
Sbjct: 53 NVL-------------VNGDCQWI--TTLHYAFQD-----------EN-----YLYLVMD 81
Query: 475 YCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
Y TL FE D +++A ++V + IH +HRD+ P+N+ D
Sbjct: 82 YYVGGDLLTLLSKFE--DRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNG 139
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ----VGTYFYTAPEI----EQG 582
I++ DFG LK+ Q DGT Q VGT Y +PEI E G
Sbjct: 140 HIRLADFG--SCLKMNQ----------------DGTVQSSVAVGTPDYISPEILQAMEDG 181
Query: 583 WPKIDEKADMYSLGIVFFELWH---PF--STAMERQIVLSDLKQKGELPPSWVAKFSEQ- 636
K + D +SLG+ +E+ + PF + +E + + +++ + PS + SE+
Sbjct: 182 MGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF-PSHITDVSEEA 240
Query: 637 ESLLRRLM 644
+ L++RL+
Sbjct: 241 KDLIQRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331 |
| >gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 64.0 bits (156), Expect = 1e-10
Identities = 79/308 (25%), Positives = 124/308 (40%), Gaps = 72/308 (23%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+DFE L+ +G G FG V + K K G+ YA+K IL + L R +
Sbjct: 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMK--------------ILNKWEMLKRAE-- 44
Query: 415 HVVRYYQAWF--ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
A F E V GD W ++ Q+ LY+
Sbjct: 45 ------TACFREERDVLVN-GDRRW--------------ITNLHYAFQDEN----NLYLV 79
Query: 473 MEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
M+Y TL FE D +++A ++V + +H G +HRD+ P+N+ D
Sbjct: 80 MDYYVGGDLLTLLSKFE--DRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDK 137
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWP 584
I++ DFG L+L G +V VGT Y +PEI E G
Sbjct: 138 NGHIRLADFG--SCLRL-----------LADG-TVQSNVAVGTPDYISPEILQAMEDGKG 183
Query: 585 KIDEKADMYSLGIVFFELWH---PF--STAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639
+ + D +SLG+ +E+ + PF + +E + + K+ + PP E + L
Sbjct: 184 RYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDL 243
Query: 640 LRRLMSPS 647
+RRL+
Sbjct: 244 IRRLICSP 251
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331 |
| >gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Score = 63.6 bits (155), Expect = 1e-10
Identities = 89/367 (24%), Positives = 147/367 (40%), Gaps = 95/367 (25%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
DFE ++ + +G +G V L ++K + +A+KKI + ILR Q Q
Sbjct: 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKIN-------KQNLILRN-------QIQ 46
Query: 415 HVVRYYQAWFETGVADFDGD----SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
Q + E + F + SM+ S F + +L
Sbjct: 47 ------QVFVERDILTFAENPFVVSMFCS-------FETK----------------RHLC 77
Query: 471 IQMEY-----CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525
+ MEY C L+ + ++A F + V L ++H GI+HRDL P+N+
Sbjct: 78 MVMEYVEGGDCATLLKNI----GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLL 133
Query: 526 FDARNDIKIGDFGLAKF--------LKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTA 576
+ IK+ DFGL+K L +++D D QV GT Y A
Sbjct: 134 ITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDK---------QVCGTPEYIA 184
Query: 577 PEI--EQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVA 631
PE+ QG+ K D +++GI+ +E PF ++ + E P A
Sbjct: 185 PEVILRQGYGK---PVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEA 241
Query: 632 KFSEQESLLRRLMSPSPSDR---PSATELLQDALPPQMEYELLDNILRM-------MHSS 681
++ + L+ RL+ +P +R A E+ Q +++ L LR + S
Sbjct: 242 LPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGLDWNGL---LRQKAEFIPQLESE 298
Query: 682 EDTSIYD 688
+DTS +D
Sbjct: 299 DDTSYFD 305
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305 |
| >gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Score = 63.1 bits (153), Expect = 1e-10
Identities = 71/321 (22%), Positives = 133/321 (41%), Gaps = 83/321 (25%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLPVNDRILREVATLSRL 411
+D+E +Q +G G +G V +N G AVK I+L+ D SL I +E+ +
Sbjct: 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSL-----IQQEIFMVKEC 63
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+H ++V Y+ ++ L L+I
Sbjct: 64 KHCNIVAYFGSY----------------------------------------LSREKLWI 83
Query: 472 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
MEYC +L+ ++ + ++ R+ ++GLA++H +G +HRD+ NI
Sbjct: 84 CMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNG 143
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ-----GWPK 585
D+K+ DFG+A + + + +F +GT ++ APE+ G+ +
Sbjct: 144 DVKLADFGVAAKIT-ATIAKRKSF--------------IGTPYWMAPEVAAVEKNGGYNQ 188
Query: 586 IDEKADMYSLGIVFFEL--WHPFSTAMERQIVLSDLKQKGELPP------SWVAKFSEQE 637
+ D++++GI EL P + L + + PP W + F
Sbjct: 189 L---CDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTF---H 242
Query: 638 SLLRRLMSPSPSDRPSATELL 658
+ ++ ++ +P RP+A LL
Sbjct: 243 NFVKISLTKNPKKRPTAERLL 263
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267 |
| >gnl|CDD|218742 pfam05773, RWD, RWD domain | Back alignment and domain information |
|---|
Score = 59.3 bits (144), Expect = 1e-10
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLV 66
VS +L YP + PK+ ++ L D LL L++ A N G VMIF L+
Sbjct: 49 LVSLVLTFTLPEDYPDEPPKISLSSPWLLRDQDKLQLLKELEELAEENL--GEVMIFELI 106
Query: 67 EAAQEFL 73
E QE L
Sbjct: 107 EWLQENL 113
|
This domain was identified in WD40 repeat proteins and Ring finger domain proteins. The function of this domain is unknown. GCN2 is the alpha-subunit of the only translation initiation factor (eIF2 alpha) kinase that appears in all eukaryotes. Its function requires an interaction with GCN1 via the domain at its N-terminus, which is termed the RWD domain after three major RWD-containing proteins: RING finger-containing proteins, WD-repeat-containing proteins, and yeast DEAD (DEXD)-like helicases. The structure forms an alpha + beta sandwich fold consisting of two layers: a four-stranded antiparallel beta-sheet, and three side-by-side alpha-helices. Length = 113 |
| >gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Score = 63.0 bits (153), Expect = 1e-10
Identities = 50/157 (31%), Positives = 69/157 (43%), Gaps = 26/157 (16%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+I+ GL H+H + +++RDL P NI D ++I D GLA D P
Sbjct: 105 EIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLA-------CDFSKKKP----- 152
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF---STAMERQI 614
VGT+ Y APE+ Q D AD +SLG + F+L PF T + +I
Sbjct: 153 -----HASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 207
Query: 615 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
L ELP S+ E SLL L+ + R
Sbjct: 208 DRMTLTMAVELPDSFS---PELRSLLEGLLQRDVNRR 241
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278 |
| >gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 64.1 bits (156), Expect = 2e-10
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 559
R+++E LA++HG+GIIHRD+ NIF D + +GDFG A +LD P
Sbjct: 192 RRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAAC-----KLDAHPDTPQC-- 244
Query: 560 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
G GT +PE+ P K D++S G+V FE+
Sbjct: 245 ------YGWSGTLETNSPELLALDPYC-AKTDIWSAGLVLFEM 280
|
Length = 392 |
| >gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Score = 62.1 bits (151), Expect = 3e-10
Identities = 74/332 (22%), Positives = 128/332 (38%), Gaps = 86/332 (25%)
Query: 339 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 398
VD G P YL++F ++ G G G V + +K GR AVKK+ L+ +
Sbjct: 12 VDPGDPR------SYLDNFVKI---GEGSTGIVCIATDKSTGRQVAVKKMDLRKQQR--R 60
Query: 399 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 458
+ + EV + QH ++V Y ++ GD +W
Sbjct: 61 ELLFNEVVIMRDYQHPNIVEMYSSYLV-------GDELW--------------------- 92
Query: 459 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 93 ------------VVMEFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRD 140
Query: 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ---VGTYFYT 575
+ ++I + +K+ DFG VS + + VGT ++
Sbjct: 141 IKSDSILLTSDGRVKLSDFGFC------------------AQVSKEVPRRKSLVGTPYWM 182
Query: 576 APEIEQGWPKIDEKADMYSLGIVFFELWH---PFST-----AMERQIVLSDLKQKGELPP 627
APE+ P + D++SLGI+ E+ P+ AM+R + D
Sbjct: 183 APEVISRLP-YGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKR---IRDNLPPKLKNL 238
Query: 628 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
V+ S L R++ P+ R +A ELL
Sbjct: 239 HKVS--PRLRSFLDRMLVRDPAQRATAAELLN 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285 |
| >gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 4e-10
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 40/187 (21%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
+F ++P+ G FG V L + K + + YAVK ++ K+ +N ++ +V
Sbjct: 5 EFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVK---KADMINKNMVHQV---------- 51
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
A+ D ++ S + +S ++A+ +Y+ MEY
Sbjct: 52 ------------QAERDALALSKSPFIVHLYYSLQSAN--------------NVYLVMEY 85
Query: 476 -CPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
++ + Y +FD+E+A ++ L ++H GIIHRDL P+N+ IK+
Sbjct: 86 LIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKL 145
Query: 535 GDFGLAK 541
DFGL+K
Sbjct: 146 TDFGLSK 152
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669 |
| >gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Score = 62.0 bits (150), Expect = 4e-10
Identities = 75/331 (22%), Positives = 130/331 (39%), Gaps = 84/331 (25%)
Query: 339 VDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN 398
VD G P YL++F ++ G G G V + K G+ AVKK+ L+ +
Sbjct: 13 VDPGDPRT------YLDNFIKI---GEGSTGIVCIATVKSSGKLVAVKKMDLRKQQR--R 61
Query: 399 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 458
+ + EV + QH++VV Y ++ GD +W
Sbjct: 62 ELLFNEVVIMRDYQHENVVEMYNSYLV-------GDELW--------------------- 93
Query: 459 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518
+ ME+ ++ ++E + +++ L+ +H QG+IHRD
Sbjct: 94 ------------VVMEFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRD 141
Query: 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578
+ ++I +K+ DFG + E + + VGT ++ APE
Sbjct: 142 IKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL---------------VGTPYWMAPE 186
Query: 579 IEQGWPKIDEKADMYSLGIVFFELWH---PF-------STAMERQIVLSDLKQKGELPPS 628
+ P E D++SLGI+ E+ P+ + M R + LK ++ PS
Sbjct: 187 LISRLPYGPE-VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPS 245
Query: 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
+ L RL+ P+ R +A ELL+
Sbjct: 246 L-------KGFLDRLLVRDPAQRATAAELLK 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292 |
| >gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Score = 62.9 bits (153), Expect = 4e-10
Identities = 43/141 (30%), Positives = 66/141 (46%), Gaps = 23/141 (16%)
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNI 524
YLY+ MEY P L + +YD +K W F ++V L IH G IHRD+ P+N+
Sbjct: 117 YLYMVMEYMPGGDLVNLMSNYDIPEK---WARFYTAEVVLALDAIHSMGFIHRDVKPDNM 173
Query: 525 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQ 581
D +K+ DFG ++D + DT VGT Y +PE+ +
Sbjct: 174 LLDKSGHLKLADFGTCM-----KMDANGMVRCDTA---------VGTPDYISPEVLKSQG 219
Query: 582 GWPKIDEKADMYSLGIVFFEL 602
G + D +S+G+ +E+
Sbjct: 220 GDGYYGRECDWWSVGVFLYEM 240
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370 |
| >gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Score = 62.7 bits (152), Expect = 4e-10
Identities = 66/253 (26%), Positives = 107/253 (42%), Gaps = 62/253 (24%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
D++ ++ +G G FG V L ++K + YA+K +L + + R
Sbjct: 44 DYDVVKVIGRGAFGEVQLVRHKSSQKVYAMK--------------LLSKFEMIKRSDSAF 89
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
W E + F +S W + Q++K YLY+ MEY
Sbjct: 90 F------WEERDIMAF-ANSPWVVQLFCAF--------------QDDK----YLYMVMEY 124
Query: 476 CPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
P L + +YD +K W F ++V L IH G+IHRD+ P+N+ D +
Sbjct: 125 MPGGDLVNLMSNYDVPEK---WAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHL 181
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGWPKIDEK 589
K+ DFG +K+++ TG V D VGT Y +PE+ + G +
Sbjct: 182 KLADFGTC--MKMDE----------TGMVRCDTA--VGTPDYISPEVLKSQGGDGYYGRE 227
Query: 590 ADMYSLGIVFFEL 602
D +S+G+ FE+
Sbjct: 228 CDWWSVGVFLFEM 240
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370 |
| >gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 8e-10
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 27/174 (15%)
Query: 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 549
FD++ A ++ GL + + I++RDL P NI D R I+I D GLA
Sbjct: 99 FDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLA--------- 149
Query: 550 QDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF 606
P G +V G+VGT Y APE+ K D + LG + +E+ PF
Sbjct: 150 --VQIPE---GETV--RGRVGTVGYMAPEVINN-EKYTFSPDWWGLGCLIYEMIQGQSPF 201
Query: 607 STAME---RQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATE 656
E R+ V +K+ E + KFSE +S+ R L++ +P +R
Sbjct: 202 RKRKERVKREEVDRRVKEDQE---EYSEKFSEDAKSICRMLLTKNPKERLGCRG 252
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285 |
| >gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 9e-10
Identities = 56/187 (29%), Positives = 82/187 (43%), Gaps = 23/187 (12%)
Query: 469 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
L+ MEY L +S FD A +I+ GL +H +GI++RDL +NI D
Sbjct: 71 LFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD 130
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
IKI DFG+ K E + DA T GT Y APEI G K +
Sbjct: 131 TDGHIKIADFGMCK----ENMLGDAKTCT-----------FCGTPDYIAPEILLG-QKYN 174
Query: 588 EKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644
D +S G++ +E+ PF E ++ S ++ P W+ + E + +L +L
Sbjct: 175 TSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQS-IRMDNPCYPRWLTR--EAKDILVKLF 231
Query: 645 SPSPSDR 651
P R
Sbjct: 232 VREPERR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316 |
| >gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 9e-10
Identities = 65/254 (25%), Positives = 104/254 (40%), Gaps = 61/254 (24%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK--DKSLPVNDRILREVATLSRLQ-- 412
+E + +G G +G V ++ G A+K +R++ + LP++ +REVA L RL+
Sbjct: 2 YEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLS--TVREVALLKRLEAF 59
Query: 413 -HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H ++VR L ++R T +E K+ +
Sbjct: 60 DHPNIVR-----------------------LMDVCATSR-------TDRETKVTLVF--- 86
Query: 472 QMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
E+ + LR + E L RQ + GL +H I+HRDL P NI +
Sbjct: 87 --EHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSG 144
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
+K+ DFGLA+ Q A P V T +Y APE+
Sbjct: 145 GQVKLADFGLARIYSC----QMALTPV------------VVTLWYRAPEVLLQ-STYATP 187
Query: 590 ADMYSLGIVFFELW 603
DM+S+G +F E++
Sbjct: 188 VDMWSVGCIFAEMF 201
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288 |
| >gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Score = 60.7 bits (147), Expect = 1e-09
Identities = 49/154 (31%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+IV GL +H +GII+RDL +N+ D IKI DFG+ K E + D T
Sbjct: 104 EIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCK----ENVFGDNRAST---- 155
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLS 617
GT Y APEI QG K D +S G++ +E+ PF E ++ S
Sbjct: 156 -------FCGTPDYIAPEILQGL-KYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFES 207
Query: 618 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
++ P W+ K E + +L +L P+ R
Sbjct: 208 -IRVDTPHYPRWITK--ESKDILEKLFERDPTRR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316 |
| >gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 1e-09
Identities = 45/154 (29%), Positives = 71/154 (46%), Gaps = 22/154 (14%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+I GL +H +GII+RDL +N+ DA IKI DFG+ K + F T
Sbjct: 109 EIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCK---------ENIFGGKTTR 159
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS 617
GT Y APEI P + D ++ G++ +E+ PF E ++ S
Sbjct: 160 TF------CGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQS 212
Query: 618 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
++ P S ++K E S+ + L++ P+ R
Sbjct: 213 IMEHNVSYPKS-LSK--EAVSICKGLLTKHPAKR 243
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324 |
| >gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Score = 60.1 bits (145), Expect = 1e-09
Identities = 70/324 (21%), Positives = 130/324 (40%), Gaps = 84/324 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKK---IRLKDKSLPVNDRILREVATLSRL-Q 412
FE ++ +G+G +G V GRH + I++ D + + I +E+ L +
Sbjct: 8 FELVELVGNGTYGQV------YKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH 61
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H+++ YY A+ + D D +W +
Sbjct: 62 HRNIATYYGAFIKKNPPGMD-DQLW---------------------------------LV 87
Query: 473 MEYC-PRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
ME+C ++ + ++ + +E ++ R+I+ GL+H+H +IHRD+ N+
Sbjct: 88 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTEN 147
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPK 585
++K+ DFG++ QLD+ +GT ++ APE+ E
Sbjct: 148 AEVKLVDFGVSA-----QLDRTVGRRNTF----------IGTPYWMAPEVIACDENPDAT 192
Query: 586 IDEKADMYSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGEL-PPSWVAKFSE 635
D K+D++SLGI E+ HP R + L L W KF
Sbjct: 193 YDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFLIPRNPAPRLKSKKWSKKF-- 245
Query: 636 QESLLRRLMSPSPSDRPSATELLQ 659
+S + + + S RP+ +L++
Sbjct: 246 -QSFIESCLVKNHSQRPTTEQLMK 268
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272 |
| >gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Score = 60.8 bits (147), Expect = 1e-09
Identities = 80/327 (24%), Positives = 133/327 (40%), Gaps = 76/327 (23%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+DFE + LG G G V ++K G A K I L+ K + ++I+RE+ L
Sbjct: 5 DDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 63
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V +Y A++ G + M G
Sbjct: 64 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 88
Query: 475 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 533
+L QV + +E+ + ++ GLA++ + I+HRD+ P+NI ++R +IK
Sbjct: 89 ----SLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIK 144
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPKIDEKAD 591
+ DFG++ G +D VGT Y +PE QG ++D
Sbjct: 145 LCDFGVS-------------------GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSD 184
Query: 592 MYSLGIVFFELWHPFSTAMER-QIVLSDLKQKGEL--PPSWVAKFSEQESLLRRLMSPSP 648
++S+G+ EL A+ R I D K+ + P + E S+ R P P
Sbjct: 185 IWSMGLSLVEL------AIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPR---PRP 235
Query: 649 SDRPSATELLQDALPPQMEYELLDNIL 675
RP + + D+ P +ELLD I+
Sbjct: 236 PGRPVSGHGM-DSRPAMAIFELLDYIV 261
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331 |
| >gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Score = 61.0 bits (148), Expect = 2e-09
Identities = 80/336 (23%), Positives = 129/336 (38%), Gaps = 90/336 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
F +++ +G G FG V L + K+D YA+K +R D L R Q H
Sbjct: 3 FVKIKTIGIGAFGEVCLVR-KVDTNALYAMKTLRKAD--------------VLMRNQAAH 47
Query: 416 VVRYYQAWFETGVADFD----GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
V A+ D D+ W S F + ++N LY
Sbjct: 48 VK-----------AERDILAEADNEWVVKLYYS--FQD----------KDN------LYF 78
Query: 472 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
M+Y P + + F+++LA ++ + +H G IHRD+ P+NI D
Sbjct: 79 VMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDG 138
Query: 531 DIKIGDFGLAK----------FLKLEQLDQDAAFPTDTGG---------VSVDGTGQ--- 568
IK+ DFGL + K + QD+ P++ + Q
Sbjct: 139 HIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQR 198
Query: 569 ------VGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELW---HPF--STAMERQIV 615
VGT Y APE+ G+ ++ D +S+G++ +E+ PF T E Q+
Sbjct: 199 CLAHSLVGTPNYIAPEVLLRTGYTQL---CDWWSVGVILYEMLVGQPPFLADTPAETQLK 255
Query: 616 LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
+ + + +P AK S + S L + DR
Sbjct: 256 VINWETTLHIPSQ--AKLSREASDLILRLCCGAEDR 289
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376 |
| >gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 59.0 bits (143), Expect = 2e-09
Identities = 68/311 (21%), Positives = 117/311 (37%), Gaps = 79/311 (25%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 419
L+ LG G FG V L K + A+K IR + ++ +D I E + +L H ++V+
Sbjct: 9 LKELGSGQFGVVHLGKWR-GKIDVAIKMIR--EGAMSEDDFI-EEAKVMMKLSHPNLVQL 64
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY---- 475
Y GV + ++I EY
Sbjct: 65 Y------GVC----------------------------------TKQRPIFIVTEYMANG 84
Query: 476 CPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
C LR+ E + + E + ++ G IHRDL N N +K+
Sbjct: 85 CLLNYLRERKGK---LGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKV 141
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPEIEQGWPKIDEKAD 591
DFGLA+++ LD T GT F + PE+ + + K+D
Sbjct: 142 SDFGLARYV----LDDQY-------------TSSQGTKFPVKWAPPEVFD-YSRFSSKSD 183
Query: 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647
++S G++ +E++ P+ + V+ + L +A +E +++
Sbjct: 184 VWSFGVLMWEVFSEGKMPYERFSNSE-VVESVSAGYRLYRPKLAP-TEVYTIMYSCWHEK 241
Query: 648 PSDRPSATELL 658
P DRP+ +LL
Sbjct: 242 PEDRPAFKKLL 252
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256 |
| >gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 3e-09
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 62/253 (24%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
D+E ++ +G G FG V L ++K + YA+K +L + + R
Sbjct: 44 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMK--------------LLSKFEMIKRSDSAF 89
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
W E + F +S W + ++ + + YLY+ MEY
Sbjct: 90 F------WEERDIMAF-ANSPW----VVQLFYAFQ--------------DDRYLYMVMEY 124
Query: 476 CPR-TLRQVFESYDHFDKELAWHLF--RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
P L + +YD +K W F ++V L IH G IHRD+ P+N+ D +
Sbjct: 125 MPGGDLVNLMSNYDVPEK---WARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHL 181
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGWPKIDEK 589
K+ DFG +++++ DT VGT Y +PE+ + G +
Sbjct: 182 KLADFGTCM-----KMNKEGMVRCDTA---------VGTPDYISPEVLKSQGGDGYYGRE 227
Query: 590 ADMYSLGIVFFEL 602
D +S+G+ +E+
Sbjct: 228 CDWWSVGVFLYEM 240
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371 |
| >gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Score = 59.2 bits (143), Expect = 3e-09
Identities = 32/102 (31%), Positives = 52/102 (50%), Gaps = 15/102 (14%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
Q++ GLA+IHGQ I+HRDL P N+ ++K+ DFGLA+ + P+ T
Sbjct: 111 QLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLAR---------AKSIPSQT-- 159
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
+ +V T +Y P++ G D++ G +F E+
Sbjct: 160 ----YSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEM 197
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291 |
| >gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Score = 59.3 bits (143), Expect = 3e-09
Identities = 70/320 (21%), Positives = 120/320 (37%), Gaps = 86/320 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLK--DKSLPVNDRILREVATLSRLQ- 412
+E + +G G +G V ++ K GR A+K++R++ ++ +P++ +REVA L L+
Sbjct: 3 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLS--TIREVAVLRHLET 60
Query: 413 --HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
H +VVR + DV T L
Sbjct: 61 FEHPNVVRLF-----------------------------------DVCTVSRTDRETKLT 85
Query: 471 IQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
+ E+ + L + E + Q++ GL +H ++HRDL P NI +
Sbjct: 86 LVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS 145
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
IK+ DFGLA+ + T V T +Y APE+
Sbjct: 146 SGQIKLADFGLARIYSFQMAL----------------TSVVVTLWYRAPEVLLQ-SSYAT 188
Query: 589 KADMYSLGIVFFELWHPFSTAMERQIVL---SDLKQKGELPPSWVAKFSEQESLLRRLMS 645
D++S+G +F E++ R+ + SD+ Q G++ L +
Sbjct: 189 PVDLWSVGCIFAEMF-------RRKPLFRGSSDVDQLGKI--------------LDVIGL 227
Query: 646 PSPSDRPSATELLQDALPPQ 665
P D P L + A +
Sbjct: 228 PGEEDWPRDVALPRQAFHSK 247
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290 |
| >gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 60.0 bits (145), Expect = 4e-09
Identities = 54/184 (29%), Positives = 74/184 (40%), Gaps = 33/184 (17%)
Query: 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 559
R ++ + ++H IIHRD+ NIF + D+ +GDFG A FP D
Sbjct: 189 RSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGA------------ACFPVDIN 236
Query: 560 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAME-------- 611
G GT APE+ P D++S GIV FE+ + E
Sbjct: 237 ANKY--YGWAGTIATNAPELLARDP-YGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDC 293
Query: 612 ---RQIVLSDLKQKG----ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664
RQI L +++ G E P A E L + S P RP T L + LP
Sbjct: 294 DSDRQIKLI-IRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYE--LPI 350
Query: 665 QMEY 668
+EY
Sbjct: 351 DLEY 354
|
Length = 391 |
| >gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 4e-09
Identities = 48/171 (28%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 559
+Q +E L ++H IIHRDL NI F DIK+ DFG++ + + +F
Sbjct: 110 KQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSA-KNTRTIQRRDSF----- 163
Query: 560 GVSVDGTGQVGTYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQI 614
+GT ++ APE+ + P D KAD++SLGI E+ E
Sbjct: 164 ---------IGTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAQIEPPHHELNP 213
Query: 615 VLSDLKQKGELPPS------WVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
+ LK PP+ W ++F + L++ + + R + T+LLQ
Sbjct: 214 MRVLLKIAKSEPPTLAQPSRWSSEFKD---FLKKCLEKNVDARWTTTQLLQ 261
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282 |
| >gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 60.3 bits (146), Expect = 4e-09
Identities = 35/102 (34%), Positives = 49/102 (48%), Gaps = 14/102 (13%)
Query: 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 559
RQ++ + +IHG+GIIHRD+ N+ + DI +GDFG A F + F
Sbjct: 267 RQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFA---RGSWSTPFH---- 319
Query: 560 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 601
G GT APE+ G P D++S G+V FE
Sbjct: 320 ------YGIAGTVDTNAPEVLAGDP-YTPSVDIWSAGLVIFE 354
|
Length = 461 |
| >gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Score = 59.7 bits (144), Expect = 5e-09
Identities = 42/143 (29%), Positives = 67/143 (46%), Gaps = 21/143 (14%)
Query: 465 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLT 520
++ +L + ME+ P+T+ + + Y + L L + Q+ LA+IH + I HRDL
Sbjct: 138 KNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLK 197
Query: 521 PNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579
P N+ D + +K+ DFG AK L G SV + + FY APE+
Sbjct: 198 PQNLLIDPNTHTLKLCDFGSAKNLL-------------AGQRSVS---YICSRFYRAPEL 241
Query: 580 EQGWPKIDEKADMYSLGIVFFEL 602
G D++SLG + E+
Sbjct: 242 MLGATNYTTHIDLWSLGCIIAEM 264
|
Length = 440 |
| >gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 5e-09
Identities = 46/158 (29%), Positives = 79/158 (50%), Gaps = 23/158 (14%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+IV L H+H GII+RD+ NI D+ + + DFGL+K +++++ +F
Sbjct: 113 EIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSF------ 166
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKA-DMYSLGIVFFELW---HPFSTAMER--QI 614
GT Y AP+I +G +KA D +S+G++ +EL PF+ E+ Q
Sbjct: 167 --------CGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQA 218
Query: 615 VLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDR 651
+S K E P P ++ + + +++RL+ P R
Sbjct: 219 EISRRILKSEPPYPQEMSALA--KDIIQRLLMKDPKKR 254
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290 |
| >gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Score = 58.4 bits (141), Expect = 6e-09
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 54/250 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 412
+ ++ LG G FG V LC+ +G AVK ++ + + D + +E+ L L
Sbjct: 6 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIAD-LKKEIEILRNLY 64
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H+++V+Y G+ DG G+G F L S L
Sbjct: 65 HENIVKY------KGICTEDG----GNGIKLIMEF----------------LPSGSL--- 95
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
EY PR ++ + ++L + + QI +G+ ++ + +HRDL N+ ++ + +
Sbjct: 96 KEYLPRNKNKI-----NLKQQLKYAV--QICKGMDYLGSRQYVHRDLAARNVLVESEHQV 148
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
KIGDFGL K A TD +V ++Y APE K +D+
Sbjct: 149 KIGDFGLTK-----------AIETDKEYYTVKDDLDSPVFWY-APECLIQ-SKFYIASDV 195
Query: 593 YSLGIVFFEL 602
+S G+ +EL
Sbjct: 196 WSFGVTLYEL 205
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284 |
| >gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 7e-09
Identities = 62/254 (24%), Positives = 100/254 (39%), Gaps = 70/254 (27%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
+G G FG V+L K KLDG+ YAVK +L++ L+R + +H+
Sbjct: 3 IGKGSFGKVLLAKRKLDGKCYAVK--------------VLQKKIVLNRKEQKHI------ 42
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST-YLYIQMEYCPRTLR 481
+A + + G ++T LY +++
Sbjct: 43 -------------------MAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG-- 81
Query: 482 QVFESYDHFDKELAWHLFR------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
E + H +E ++ R +I L ++H I++RDL P NI D++ + +
Sbjct: 82 ---ELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLT 138
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFGL K + Q D F GT Y APE+ + P D D + L
Sbjct: 139 DFGLCK-EGIAQSDTTTTF--------------CGTPEYLAPEVIRKQP-YDNTVDWWCL 182
Query: 596 GIVFFELWH---PF 606
G V +E+ + PF
Sbjct: 183 GAVLYEMLYGLPPF 196
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325 |
| >gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Score = 58.1 bits (140), Expect = 8e-09
Identities = 56/257 (21%), Positives = 107/257 (41%), Gaps = 66/257 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKK---IRLKDKSLPVNDRILREVATLSRL-Q 412
FE ++ +G+G +G V GRH + I++ D + + I E+ L +
Sbjct: 18 FELVEVVGNGTYGQV------YKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSH 71
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H+++ YY A+ + D D +W +
Sbjct: 72 HRNIATYYGAFIKKSPPGHD-DQLW---------------------------------LV 97
Query: 473 MEYC-PRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
ME+C ++ + ++ + ++ ++ R+I+ GLAH+H +IHRD+ N+
Sbjct: 98 MEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTEN 157
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPK 585
++K+ DFG++ QLD+ +GT ++ APE+ E
Sbjct: 158 AEVKLVDFGVSA-----QLDRTVGRRNTF----------IGTPYWMAPEVIACDENPDAT 202
Query: 586 IDEKADMYSLGIVFFEL 602
D ++D++SLGI E+
Sbjct: 203 YDYRSDIWSLGITAIEM 219
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282 |
| >gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Score = 58.9 bits (142), Expect = 8e-09
Identities = 80/336 (23%), Positives = 129/336 (38%), Gaps = 86/336 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRLQHQH 415
F +++ LG G FG V L + YA+K +R KD L + E L+ ++
Sbjct: 3 FVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEW 62
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
VVR Y + F+ D D+ LY M+Y
Sbjct: 63 VVRLYYS-FQ------DKDN---------------------------------LYFVMDY 82
Query: 476 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
P + + F ++LA ++ + +H G IHRD+ P+NI D IK+
Sbjct: 83 IPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKL 142
Query: 535 GDFGLAKFLKL----------EQLDQDAA-FPTDTGGVSVDGTGQ--------------- 568
DFGL + + + QD+ F + G + G
Sbjct: 143 TDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQR 202
Query: 569 ------VGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF--STAMERQIV 615
VGT Y APE+ G+ ++ D +S+G++ +E+ PF T +E Q+
Sbjct: 203 CLAHSLVGTPNYIAPEVLLRTGYTQL---CDWWSVGVILYEMLVGQPPFLAQTPLETQMK 259
Query: 616 LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
+ + + +PP AK S + S L + P DR
Sbjct: 260 VINWQTSLHIPPQ--AKLSPEASDLIIKLCRGPEDR 293
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382 |
| >gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Score = 58.5 bits (141), Expect = 8e-09
Identities = 76/325 (23%), Positives = 131/325 (40%), Gaps = 74/325 (22%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 5 DDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKP-AIRNQIIRELQVLHECNSP 63
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V +Y A++ G + M G
Sbjct: 64 YIVGFYGAFYSDGEISICMEHMDGG----------------------------------- 88
Query: 475 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 533
+L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +IK
Sbjct: 89 ----SLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIK 144
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ--VGTYFYTAPEIEQGWPKIDEKAD 591
+ DFG++ G +D VGT Y +PE QG ++D
Sbjct: 145 LCDFGVS-------------------GQLIDSMANSFVGTRSYMSPERLQG-THYSVQSD 184
Query: 592 MYSLGIVFFELWHPFSTAMER-QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650
++S+G+ E+ A+ R I D K+ + V + R P P
Sbjct: 185 IWSMGLSLVEM------AIGRYPIPPPDAKELELMFGCPVEGDPAESETSPR---PRPPG 235
Query: 651 RPSATELLQDALPPQMEYELLDNIL 675
RP ++ D+ PP +ELLD I+
Sbjct: 236 RPLSS-YGPDSRPPMAIFELLDYIV 259
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333 |
| >gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Score = 57.9 bits (140), Expect = 1e-08
Identities = 47/165 (28%), Positives = 72/165 (43%), Gaps = 22/165 (13%)
Query: 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 549
FD+ + ++ L +H G+I+RDL +NI DA K+ DFG+ K E +
Sbjct: 93 FDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCK----EGIL 148
Query: 550 QDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PF 606
T GT Y APEI Q D ++LG++ +E+ PF
Sbjct: 149 NGVTTTT-----------FCGTPDYIAPEILQELE-YGPSVDWWALGVLMYEMMAGQPPF 196
Query: 607 STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
E + S L L P W++K E S+L+ M+ +P+ R
Sbjct: 197 EADNEDDLFESILHDD-VLYPVWLSK--EAVSILKAFMTKNPNKR 238
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321 |
| >gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Score = 57.6 bits (139), Expect = 1e-08
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 561
+V+GL ++ I+HRD+ P+N+ + R +K+ DFG++ L V
Sbjct: 104 VVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQL-----------------V 146
Query: 562 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSD 618
+ VGT Y APE G + +D++SLGI F EL P+ + Q L
Sbjct: 147 NSIAKTYVGTNAYMAPERISG-EQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMP 205
Query: 619 LKQ----KGELPPSW-VAKFSEQ-ESLLRRLMSPSPSDRPSATELL 658
L+ E PP V +FSE+ + + M P +RP+ L+
Sbjct: 206 LQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLM 251
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279 |
| >gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 1e-08
Identities = 52/250 (20%), Positives = 99/250 (39%), Gaps = 66/250 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ + +G G G V + G+ A+K++ L+ + P + I+ E+ + +H ++
Sbjct: 21 YTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNI 78
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V Y ++ GD +W + MEY
Sbjct: 79 VNYLDSYLV-------GDELW---------------------------------VVMEYL 98
Query: 477 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
+L V + ++A + R+ ++ L +H +IHRD+ +NI +K+
Sbjct: 99 AGGSLTDVVTETCMDEGQIA-AVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 157
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGWPKIDEKADM 592
DFG + EQ + + VGT ++ APE+ + PK+ D+
Sbjct: 158 DFGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTRKAYGPKV----DI 198
Query: 593 YSLGIVFFEL 602
+SLGI+ E+
Sbjct: 199 WSLGIMAIEM 208
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293 |
| >gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Score = 57.2 bits (138), Expect = 2e-08
Identities = 75/308 (24%), Positives = 121/308 (39%), Gaps = 75/308 (24%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--------RILREVATLSRLQ 412
+ LG G FG V+L + K GR YAVK ++ KD L +D RIL +L+R
Sbjct: 1 RVLGKGSFGKVMLARLKESGRLYAVKVLK-KDVILQDDDVECTMTEKRIL----SLAR-N 54
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H + + Y F+T F F + D L
Sbjct: 55 HPFLTQLYCC-FQTPDRLF---------------FVMEFVNGGD------------LMFH 86
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
++ R FD+ A +I L +H +GII+RDL +N+ D
Sbjct: 87 IQKSRR-----------FDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHC 135
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
K+ DFG+ K E + T GT Y APEI Q D
Sbjct: 136 KLADFGMCK----EGIFNGKTTST-----------FCGTPDYIAPEILQEM-LYGPSVDW 179
Query: 593 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649
+++G++ +E+ PF E + + L + + P+W+++ + +L+ M+ +P+
Sbjct: 180 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE-VVYPTWLSQ--DAVDILKAFMTKNPT 236
Query: 650 DRPSATEL 657
R + L
Sbjct: 237 MRLGSLTL 244
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320 |
| >gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Score = 56.6 bits (136), Expect = 3e-08
Identities = 62/269 (23%), Positives = 105/269 (39%), Gaps = 56/269 (20%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
+G G FG V+L ++K + + YAVK +L++ A L + + +H++
Sbjct: 3 IGKGSFGKVLLARHKAEEKFYAVK--------------VLQKKAILKKKEEKHIMSERNV 48
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 482
+ F L FS + A + ++Q E C R
Sbjct: 49 LLKNVKHPF----------LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRA 98
Query: 483 VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542
F + +I L ++H I++RDL P NI D++ I + DFGL K
Sbjct: 99 RFYA-------------AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK- 144
Query: 543 LKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
E ++ + T GT Y APE+ P D D + LG V +E+
Sbjct: 145 ---ENIEHNGTTST-----------FCGTPEYLAPEVLHKQP-YDRTVDWWCLGAVLYEM 189
Query: 603 WH---PFSTAMERQIVLSDLKQKGELPPS 628
+ PF + ++ + L + +L P+
Sbjct: 190 LYGLPPFYSRNTAEMYDNILNKPLQLKPN 218
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325 |
| >gnl|CDD|173756 cd08216, PK_STRAD, Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Score = 56.6 bits (137), Expect = 3e-08
Identities = 65/361 (18%), Positives = 118/361 (32%), Gaps = 101/361 (27%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
H+ K AVKKI L S + +E+ T +LQH +++ Y +
Sbjct: 10 FEDLMIVHLAKHKP--TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTS 67
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY-----CP 477
+ + + LY+ C
Sbjct: 68 F----------------------------------------IVDSELYVVSPLMAYGSCE 87
Query: 478 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 537
L+ F + + + + ++ L +IH +G IHR + ++I + +
Sbjct: 88 DLLKTHFP--EGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLS-- 143
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDEKADMYSLG 596
GL + + + + D V + +PE+ +Q +EK+D+YS+G
Sbjct: 144 GLRYSVSMIKHGKRQRVVHDF------PKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVG 197
Query: 597 IVFFELWH---PFS----TAMERQIV----------------LSDLKQKGE--------- 624
I EL + PF T M + V + Q
Sbjct: 198 ITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRD 257
Query: 625 -LPPSWVAKFSEQ-----ESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMM 678
+ + FSE E L+R P RPSA++LL + Q + ++L ++
Sbjct: 258 SVDHPYTRTFSEHFHQFVELCLQR----DPESRPSASQLLNHSFFKQCK-RRNTSLLDLL 312
Query: 679 H 679
Sbjct: 313 K 313
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buccal mucosa. There are two forms of STRAD, alpha and beta, that complex with LKB1 and MO25. The structure of STRAD-alpha is available and shows that this protein binds ATP, has an ordered activation loop, and adopts a closed conformation typical of fully active protein kinases. It does not possess activity due to nonconservative substitutions of essential catalytic residues. ATP binding enhances the affinity of STRAD for MO25. The conformation of STRAD-alpha stabilized through ATP and MO25 may be needed to activate LKB1. Length = 314 |
| >gnl|CDD|173626 cd05034, PTKc_Src_like, Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 55.8 bits (135), Expect = 3e-08
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 21/105 (20%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 558
QI EG+A++ + IHRDL NI KI DFGLA+ ++ ++ + A FP
Sbjct: 111 QIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIK- 169
Query: 559 GGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 602
+TAPE G + K+D++S GI+ E+
Sbjct: 170 ---------------WTAPEAANYG--RFTIKSDVWSFGILLTEI 197
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, and Lyn show a limited expression pattern. Length = 261 |
| >gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 4e-08
Identities = 61/228 (26%), Positives = 104/228 (45%), Gaps = 30/228 (13%)
Query: 480 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 539
L V E D+ +L + QI +G+ ++ + ++HRDL N+ + N +KI DFGL
Sbjct: 96 LDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGL 155
Query: 540 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 599
A+ L+ ++ + +A D G + + + A E + K ++D++S G+
Sbjct: 156 ARLLEGDEKEYNA----DGGKMPIK---------WMALECIH-YRKFTHQSDVWSYGVTI 201
Query: 600 FELW----HPFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654
+EL P+ R+I DL +KGE LP + +++ M + S RP
Sbjct: 202 WELMTFGGKPYDGIPTREI--PDLLEKGERLPQPPICTIDVYMVMVKCWMIDADS-RPKF 258
Query: 655 TELLQD----ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE 698
EL + A PQ Y ++ RM S + S K ++ DEE
Sbjct: 259 KELAAEFSRMARDPQ-RYLVIQGDDRMKLPSPNDS---KFFQNLLDEE 302
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303 |
| >gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 4e-08
Identities = 75/306 (24%), Positives = 124/306 (40%), Gaps = 76/306 (24%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
DFE L+ +G G FG V + K K + +A+K + + +L+ T + +
Sbjct: 2 DFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWE--------MLKRAETACFREERD 53
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
V+ +GD+ W T F + LY+ M+Y
Sbjct: 54 VL-------------VNGDNQWI--TTLHYAFQ----------------DENNLYLVMDY 82
Query: 476 CP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
TL FE D +++A ++V + +H +HRD+ P+NI D
Sbjct: 83 YVGGDLLTLLSKFE--DRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGH 140
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ----VGTYFYTAPEI----EQGW 583
I++ DFG LKL + DGT Q VGT Y +PEI E G
Sbjct: 141 IRLADFG--SCLKLME----------------DGTVQSSVAVGTPDYISPEILQAMEDGK 182
Query: 584 PKIDEKADMYSLGIVFFELWH---PF--STAMERQIVLSDLKQKGELPPSWVAKFSEQES 638
K + D +SLG+ +E+ + PF + +E + + K++ + P + +
Sbjct: 183 GKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKD 242
Query: 639 LLRRLM 644
L+RRL+
Sbjct: 243 LIRRLI 248
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332 |
| >gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 5e-08
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 16/102 (15%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
Q+ EG+A++ Q IHRDL NI K+ DFGLA+ +K + + +
Sbjct: 112 QVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIK------EDVYLSSDKK 165
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
+ Y +TAPE K+D++S GI+ +E+
Sbjct: 166 IP---------YKWTAPE-AASHGTFSTKSDVWSFGILLYEM 197
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261 |
| >gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Score = 56.2 bits (135), Expect = 6e-08
Identities = 76/311 (24%), Positives = 116/311 (37%), Gaps = 82/311 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
F +++ LG G FG V L YA+K +R KD L+R Q HV
Sbjct: 3 FVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKD--------------VLNRNQVAHV 48
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
E D+ W S F ++ LY M+Y
Sbjct: 49 KAERDILAE-------ADNEWVVKLYYS--FQDKDN----------------LYFVMDYI 83
Query: 477 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
P + + + F + LA ++ + +H G IHRD+ P+NI D IK+
Sbjct: 84 PGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLT 143
Query: 536 DFGLAK----------FLKLEQLDQDAAFPTDT-GGVSVDGTGQ---------------- 568
DFGL + K + QD+ P+D VS G
Sbjct: 144 DFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRC 203
Query: 569 -----VGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFELW---HPF--STAMERQIVL 616
VGT Y APE+ +G+ ++ D +S+G++ FE+ PF T E Q+ +
Sbjct: 204 LAHSLVGTPNYIAPEVLLRKGYTQL---CDWWSVGVILFEMLVGQPPFLAPTPTETQLKV 260
Query: 617 SDLKQKGELPP 627
+ + +PP
Sbjct: 261 INWENTLHIPP 271
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381 |
| >gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Score = 54.9 bits (132), Expect = 8e-08
Identities = 40/134 (29%), Positives = 67/134 (50%), Gaps = 16/134 (11%)
Query: 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 557
+ R I G+ ++ +HRDL NI ++ K+ DFGL++F L+ D + PT
Sbjct: 111 MLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRF-----LEDDTSDPTY 165
Query: 558 TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 613
T + G++ +TAPE + K +D++S GIV +E+ P+ M Q
Sbjct: 166 TSSLG----GKIPIR-WTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWD-MSNQ 218
Query: 614 IVLSDLKQKGELPP 627
V++ ++Q LPP
Sbjct: 219 DVINAIEQDYRLPP 232
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269 |
| >gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 54.7 bits (132), Expect = 8e-08
Identities = 30/105 (28%), Positives = 48/105 (45%), Gaps = 21/105 (20%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
Q+ G+A++ Q IHRDL N+ N K+ DFGLA+ +K +
Sbjct: 111 QVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKED-------------- 156
Query: 561 VSVDGTGQVGTYF---YTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
+ G F +TAPE + + K+D++S GI+ E+
Sbjct: 157 ---IYEAREGAKFPIKWTAPEAAL-YNRFSIKSDVWSFGILLTEI 197
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261 |
| >gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Score = 55.1 bits (132), Expect = 9e-08
Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 67/254 (26%)
Query: 363 LGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 420
+G G +GHV K K D R YA+K+I S+ RE+A L L+H +V+
Sbjct: 9 VGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSA----CREIALLRELKHPNVISLQ 64
Query: 421 QAWFETG------VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+ + + D+ +W ++ +N+ +Q+
Sbjct: 65 KVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKP------------------VQL- 105
Query: 475 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF----DARN 530
PR + + L QI++G+ ++H ++HRDL P NI R
Sbjct: 106 --PRGMVK--------------SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149
Query: 531 DIKIGDFGLAKFLK--LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
+KI D G A+ L+ L D V T++Y APE+ G +
Sbjct: 150 RVKIADMGFARLFNSPLKPL--------------ADLDPVVVTFWYRAPELLLGARHYTK 195
Query: 589 KADMYSLGIVFFEL 602
D++++G +F EL
Sbjct: 196 AIDIWAIGCIFAEL 209
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317 |
| >gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Score = 55.1 bits (133), Expect = 1e-07
Identities = 76/323 (23%), Positives = 119/323 (36%), Gaps = 90/323 (27%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-------KSLPVNDRILREVATLS 409
F L LG G FG V+L + K G YA+K ++ D +SL RI T +
Sbjct: 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFE---TAN 57
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+H +V + A F+T ++
Sbjct: 58 SERHPFLVNLF-ACFQT---------------------------------------EDHV 77
Query: 470 YIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
MEY + + D F + A +V GL ++H I++RDL +N+ D
Sbjct: 78 CFVMEYAAGGDLMMHIHT--DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD 135
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPK 585
+KI DFGL K + F T GT + APE+ E +
Sbjct: 136 TEGFVKIADFGLCK--------EGMGFGDRTSTF-------CGTPEFLAPEVLTETSY-- 178
Query: 586 IDEKADMYSLGIVFFELW---HPFSTAMERQ----IVLSDLKQKGELPPSWVAKFSEQES 638
D + LG++ +E+ PF E + IV +++ L E S
Sbjct: 179 -TRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRFLS-------REAIS 230
Query: 639 LLRRLMSPSPSDRPSATELLQDA 661
++RRL+ +P R + E +DA
Sbjct: 231 IMRRLLRRNPERRLGSGE--KDA 251
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324 |
| >gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Score = 54.6 bits (131), Expect = 1e-07
Identities = 55/190 (28%), Positives = 76/190 (40%), Gaps = 42/190 (22%)
Query: 363 LGHGGFGHVVL--CKN---KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417
LG G FG V L C N D AVK LKD +L RE L+ LQH+H+V
Sbjct: 13 LGEGAFGKVFLAECYNLSPTKDKMLVAVKA--LKDPTLAARKDFQREAELLTNLQHEHIV 70
Query: 418 RYYQAWFETGVADFDGDSM------WGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
++Y GV DGD + G L ++ + V GQ + +
Sbjct: 71 KFY------GVC-GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS 123
Query: 472 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
QM H+ QI G+ ++ Q +HRDL N A
Sbjct: 124 QM----------------------LHIASQIASGMVYLASQHFVHRDLATRNCLVGANLL 161
Query: 532 IKIGDFGLAK 541
+KIGDFG+++
Sbjct: 162 VKIGDFGMSR 171
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291 |
| >gnl|CDD|222097 pfam13393, tRNA-synt_His, Histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 1e-07
Identities = 53/227 (23%), Positives = 80/227 (35%), Gaps = 43/227 (18%)
Query: 806 SVYR-RAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH----- 859
V R R G LQ ++IG A +AEV+ + ++ + ES +
Sbjct: 96 PVLRTRPDGLGGSREPLQIGAELIGHAGIEADAEVISLLLEAL------ESLGVKGVTLD 149
Query: 860 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAE 919
L H ++ A+ G+ E + + L K + +LL EL L
Sbjct: 150 LGHVGIVRALLEALGLSEAQEEALRDALQ-------------RKDLPELEELLAELGLDP 196
Query: 920 AVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYID 974
A+ + L + G + L LP P ALDEL L + +D
Sbjct: 197 ALADALLAL-PELYGDPE-VLDEALELLP-GSPAAAALDELEALAALLEALGPGVRLTLD 253
Query: 975 -ALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1020
A + E Y+ L F ++ L A GGRYD L
Sbjct: 254 LAELRGYE-YYTGLVFAAYA--PGAGQAL------ARGGRYDNLGEV 291
|
This is a family of class II aminoacyl-tRNA synthetase-like and ATP phosphoribosyltransferase regulatory subunits. Length = 308 |
| >gnl|CDD|237043 PRK12292, hisZ, ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Score = 54.9 bits (133), Expect = 1e-07
Identities = 69/331 (20%), Positives = 119/331 (35%), Gaps = 77/331 (23%)
Query: 806 SVYR-RAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHL--NH 862
+V+R + G +LQ ++IG A +AEV+ + ++ + + L H
Sbjct: 106 NVFRAQERGLGRSREFLQSGVELIGDAGLEADAEVILLLLEALK---ALGLPNFTLDLGH 162
Query: 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVV 922
L A+ AG+ E E + LA +K V +L+ +L+E +
Sbjct: 163 VGLFRALLEAAGLSEELEEVLRRALA-------------NKDYVALEELVL--DLSEELR 207
Query: 923 NRLQTVGLRFCGAADQALPRLRG---------ALPADKPTRKALDELYLRIWRI------ 967
+ L ALPRLRG L P ++ALDEL +
Sbjct: 208 DALL------------ALPRLRGGREVLEEARKLLPSLPIKRALDELE-ALAEALEKYGY 254
Query: 968 EKNIYID-ALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREY 1026
+ +D L+ + Y+ + F+ + G +A GGRYD LL + R
Sbjct: 255 GIPLSLDLGLLRHL-DYYTGIVFEGY--------VDGVGNPIASGGRYDDLL-GRFGR-- 302
Query: 1027 VGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVA 1086
G SL L+ +++ R + V+ L +
Sbjct: 303 --------ARPATGFSLDLDRLLELQLELPVEARKDL---VIAPDSEA---LAAALAAAQ 348
Query: 1087 ELWEENIKAQFVPVPDPSLTEQYEYASEHDI 1117
EL ++ + +P + + EYA + I
Sbjct: 349 ELRKKGEIVV-LALPGRNFEDAREYARDRQI 378
|
Length = 391 |
| >gnl|CDD|173633 cd05052, PTKc_Abl, Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 31/168 (18%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
QI + ++ + IHRDL N + +K+ DFGL++ + +
Sbjct: 112 QISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY------------ 159
Query: 561 VSVDGTGQVGTYF---YTAPEIEQGWPKIDEKADMYSLGIVFFEL----WHPFSTAMERQ 613
T G F +TAPE + K K+D+++ G++ +E+ P+ ++
Sbjct: 160 -----TAHAGAKFPIKWTAPE-SLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP-GIDLS 212
Query: 614 IVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
V L++ + E P K E L+R +PSDRPS E+ Q
Sbjct: 213 QVYELLEKGYRMERPEGCPPKVYE---LMRACWQWNPSDRPSFAEIHQ 257
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays a role in cell proliferation and survival. In response to DNA damage or oxidative stress, Abl is transported to the nucleus where it induces apoptosis. In chronic myelogenous leukemia (CML) patients, an aberrant translocation results in the replacement of the first exon of Abl with the BCR (breakpoint cluster region) gene. The resulting BCR-Abl fusion protein is constitutively active and associates into tetramers, resulting in a hyperactive kinase sending a continuous signal. This leads to uncontrolled proliferation, morphological transformation and anti-apoptotic effects. BCR-Abl is the target of selective inhibitors, such as imatinib (Gleevec), used in the treatment of CML. Abl2, also known as ARG (Abelson-related gene), is thought to play a cooperative role with Abl in the proper development of the nervous system. The Tel-ARG fusion protein, resulting from reciprocal translocation between chromosomes 1 and 12, is associated with acute myeloid leukemia (AML). The TEL gene is a frequent fusion partner of other tyr kinase oncogenes, including Tel/Abl, Tel/PDGFRbeta, and Tel/Jak2, found in patients with leukemia and myeloproliferative disorders. Length = 263 |
| >gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Score = 54.2 bits (130), Expect = 2e-07
Identities = 56/190 (29%), Positives = 83/190 (43%), Gaps = 29/190 (15%)
Query: 469 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
LY MEY L + F + A +I GL +H +GII+RDL +N+ D
Sbjct: 76 LYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD 135
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ---VGTYFYTAPEIEQGWP 584
+ IKI DFG+ K E + VDG GT Y APEI P
Sbjct: 136 SEGHIKIADFGMCK----EHM--------------VDGVTTRTFCGTPDYIAPEIIAYQP 177
Query: 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 641
+ D ++ G++ +E+ PF E ++ S ++ P S ++K E S+ +
Sbjct: 178 -YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPKS-LSK--EAVSICK 233
Query: 642 RLMSPSPSDR 651
LM+ PS R
Sbjct: 234 GLMTKHPSKR 243
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323 |
| >gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Score = 53.7 bits (129), Expect = 2e-07
Identities = 52/170 (30%), Positives = 75/170 (44%), Gaps = 30/170 (17%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAA-FPTDT 558
QI EG+A I + IHRDL NI KI DFGLA+ ++ E ++ A FP
Sbjct: 110 QIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPIK- 168
Query: 559 GGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQ 613
+TAPE I G I K+D++S GI+ E+ P+ M
Sbjct: 169 ---------------WTAPEAINYGTFTI--KSDVWSFGILLTEIVTYGRIPYP-GMTNP 210
Query: 614 IVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662
V+ +L++ +P P E L+R P +RP+ E L+ L
Sbjct: 211 EVIQNLERGYRMPRPDNCP--EELYELMRLCWKEKPEERPT-FEYLRSVL 257
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260 |
| >gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Score = 53.8 bits (129), Expect = 2e-07
Identities = 38/134 (28%), Positives = 65/134 (48%), Gaps = 18/134 (13%)
Query: 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 557
+ R I G+ ++ G +HRDL NI ++ K+ DFGL++ L + D +AA+ T
Sbjct: 111 MLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVL---EDDPEAAYTTR 167
Query: 558 TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQ 613
G + + +TAPE + K +D++S GIV +E+ P+ M Q
Sbjct: 168 GGKIPIR---------WTAPEAIA-YRKFTSASDVWSYGIVMWEVMSYGERPYWE-MSNQ 216
Query: 614 IVLSDLKQKGELPP 627
V+ +++ LP
Sbjct: 217 DVIKAIEEGYRLPA 230
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267 |
| >gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Score = 53.5 bits (128), Expect = 2e-07
Identities = 59/254 (23%), Positives = 102/254 (40%), Gaps = 67/254 (26%)
Query: 363 LGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 420
+G G +GHV K K D + YA+K+I S+ RE+A L L+H +V+
Sbjct: 9 VGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSA----CREIALLRELKHPNVIALQ 64
Query: 421 QAWFETG------VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+ + + D+ +W ++ +N+ +Q+
Sbjct: 65 KVFLSHSDRKVWLLFDYAEHDLWHIIKFHRASKANKKP------------------MQL- 105
Query: 475 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF----DARN 530
PR++ + L QI++G+ ++H ++HRDL P NI R
Sbjct: 106 --PRSMVK--------------SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERG 149
Query: 531 DIKIGDFGLAKFLK--LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
+KI D G A+ L+ L D V T++Y APE+ G +
Sbjct: 150 RVKIADMGFARLFNSPLKPL--------------ADLDPVVVTFWYRAPELLLGARHYTK 195
Query: 589 KADMYSLGIVFFEL 602
D++++G +F EL
Sbjct: 196 AIDIWAIGCIFAEL 209
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317 |
| >gnl|CDD|133174 cd05042, PTKc_Aatyk, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Score = 53.0 bits (127), Expect = 3e-07
Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 33/213 (15%)
Query: 464 LESTYLYIQMEYCP-----RTLR--QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516
+ES + +E+CP LR + + K++ + ++ GL +H IH
Sbjct: 65 IESIPYLLVLEFCPLGDLKNYLRSNRGMVAQMA-QKDVLQRMACEVASGLLWLHQADFIH 123
Query: 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576
DL N A +KIGD+GLA LEQ +D D V + + A
Sbjct: 124 SDLALRNCQLTADLSVKIGDYGLA----LEQYPEDYYITKDCHAVPLR---------WLA 170
Query: 577 PEIEQGW------PKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLK-QKGEL 625
PE+ + +K++++SLG+ +EL+ P+ + Q++ ++ Q +L
Sbjct: 171 PELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKL 230
Query: 626 P-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657
P P K+S++ + + P RP+A E+
Sbjct: 231 PKPQLDLKYSDRWYEVMQFCWLDPETRPTAEEV 263
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kinases based on overall sequence similarity and the phylogenetic tree. However, analysis of catalytic residues suggests that Aatyk proteins may be multispecific kinases, functioning also as serine/threonine kinases. They are involved in neural differentiation, nerve growth factor (NGF) signaling, apoptosis, and spermatogenesis. Length = 269 |
| >gnl|CDD|226228 COG3705, HisZ, ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 4e-07
Identities = 63/279 (22%), Positives = 99/279 (35%), Gaps = 33/279 (11%)
Query: 747 HLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE-IS 805
LE L G +R KL G L L + +P R + + R
Sbjct: 43 TLEPADPLLDGAGEDLRRRLFKLEDETGGRLGLRPDFTIPVARIHATLLAGTPLRLSYAG 102
Query: 806 SVYRRAIG-HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 864
V+R G H +LQ +++G SA +AEV+ + + + D+ L G
Sbjct: 103 KVFRAREGRHGRRAEFLQAGIELLGDDSAAADAEVIALALAALKA---LGLADLKLELGH 159
Query: 865 --LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVV 922
+ A+ + AG+ R ++ K ++ L+ L+ +
Sbjct: 160 AGIFRALLAAAGLPGGWRARLRRAFG-------------DKDLLGLELLVLAAPLSPELR 206
Query: 923 NRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDE---LYLRIWRIEKNIYIDALMPP 979
RL + L G + L R RG L AL+E L R+ + I +D
Sbjct: 207 GRLSEL-LALLGGRE-VLERARGLLDELMAQGIALNEGRALADIARRLIEKIALDLGRLR 264
Query: 980 IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLL 1018
Y+ L F ++ LA GGRYD LL
Sbjct: 265 HFDYYTGLVFLAYADGLGDA--------LASGGRYDGLL 295
|
Length = 390 |
| >gnl|CDD|234331 TIGR03724, arch_bud32, Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 5e-07
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 471 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
I MEY + L+ V E E L R+I + +H GI+H DLT +NI
Sbjct: 74 IVMEYIEGKPLKDVIE-------EGNDELLREIGRLVGKLHKAGIVHGDLTTSNIIVRDD 126
Query: 530 NDIKIGDFGLAKF 542
+ + DFGL K+
Sbjct: 127 -KLYLIDFGLGKY 138
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine [Unknown function, General]. Length = 199 |
| >gnl|CDD|237847 PRK14879, PRK14879, serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 5e-07
Identities = 26/74 (35%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 471 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN-IFFDA 528
I MEY L+ + S + EL+ + R + +H GIIH DLT +N I
Sbjct: 76 IVMEYIEGEPLKDLINSNGMEELELSREIGRLV----GKLHSAGIIHGDLTTSNMILSG- 130
Query: 529 RNDIKIGDFGLAKF 542
I + DFGLA+F
Sbjct: 131 -GKIYLIDFGLAEF 143
|
Length = 211 |
| >gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Score = 52.5 bits (126), Expect = 7e-07
Identities = 39/133 (29%), Positives = 55/133 (41%), Gaps = 37/133 (27%)
Query: 493 ELAWHLFRQ--------------IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
EL +HL R+ I L ++H II+RDL P NI D++ + + DFG
Sbjct: 82 ELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFG 141
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV--GTYFYTAPEIEQGWPKIDEKADMYSLG 596
L K G+ T GT Y APE+ + P D D + LG
Sbjct: 142 LCK-----------------EGIEHSKTTSTFCGTPEYLAPEVLRKQP-YDRTVDWWCLG 183
Query: 597 IVFFELWH---PF 606
V +E+ + PF
Sbjct: 184 AVLYEMLYGLPPF 196
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323 |
| >gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 8e-07
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRL 411
L D+E L LG G FG V + GR A+KKI + ++ P+ LRE+ L +L
Sbjct: 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPIT--ALREIKILKKL 64
Query: 412 QHQHVVR 418
+H +VV
Sbjct: 65 KHPNVVP 71
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311 |
| >gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 8e-07
Identities = 44/187 (23%), Positives = 76/187 (40%), Gaps = 33/187 (17%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
QI G+ H+H I++RD+ P N+ D + + ++ D GLA LK G
Sbjct: 103 QITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELK--------------DG 148
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS 617
++ T + GT Y APEI + P D +++G +E+ PF E+ +
Sbjct: 149 KTI--TQRAGTNGYMAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHKEK-VAKE 204
Query: 618 DLKQKG------------ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665
+LK++ + + + RL S +D P E + P+
Sbjct: 205 ELKRRTLEDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTINFPR 264
Query: 666 MEYELLD 672
+E L+
Sbjct: 265 LEAGLIP 271
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277 |
| >gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Score = 51.9 bits (124), Expect = 8e-07
Identities = 51/187 (27%), Positives = 78/187 (41%), Gaps = 23/187 (12%)
Query: 469 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
LY MEY L + F + A +I GL +H +GII+RDL +N+ D
Sbjct: 76 LYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD 135
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
+ IKI DFG+ K + GV+ GT Y APEI P
Sbjct: 136 SEGHIKIADFGMCKENMWD-------------GVTTKTF--CGTPDYIAPEIIAYQP-YG 179
Query: 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644
+ D ++ G++ +E+ PF E ++ S ++ P S E ++ + LM
Sbjct: 180 KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPKSMS---KEAVAICKGLM 236
Query: 645 SPSPSDR 651
+ P R
Sbjct: 237 TKHPGKR 243
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323 |
| >gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 9e-07
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 34/142 (23%)
Query: 488 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI-FFDARNDIKIGDFGLAKFLKLE 546
+ + RQ+VE L +H IIH D+ N+ + A++ I + D+GL K +
Sbjct: 104 GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGTP 163
Query: 547 QLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI-----DEKADMYSLGIVFFE 601
D GT Y +PE KI D D +++G++ +E
Sbjct: 164 SC-YD------------------GTLDYFSPE------KIKGHNYDVSFDWWAVGVLTYE 198
Query: 602 LW---HPFSTAMERQIVLSDLK 620
L HPF + ++ L L
Sbjct: 199 LLTGKHPFKEDEDEELDLESLL 220
|
Length = 267 |
| >gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Score = 51.2 bits (122), Expect = 1e-06
Identities = 65/252 (25%), Positives = 96/252 (38%), Gaps = 59/252 (23%)
Query: 363 LGHGGFGHVVL--CKN---KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417
LG G FG V L C N + D AVK LKD S RE L+ LQH+H+V
Sbjct: 13 LGEGAFGKVFLAECYNLCPEQDKILVAVKT--LKDASDNARKDFHREAELLTNLQHEHIV 70
Query: 418 RYYQAWFETGVADFDGDSM------WGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
++Y E GD + G L + F A + + N+
Sbjct: 71 KFYGVCVE-------GDPLIMVFEYMKHGDL--NKFLRAHGPDAVLMAEGNR-------- 113
Query: 472 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
P L Q H+ +QI G+ ++ Q +HRDL N
Sbjct: 114 -----PAELTQ----------SQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLL 158
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+KIGDFG+++ + TD V G P + K ++D
Sbjct: 159 VKIGDFGMSR----------DVYSTDYYRVG----GHTMLPIRWMPPESIMYRKFTTESD 204
Query: 592 MYSLGIVFFELW 603
++SLG+V +E++
Sbjct: 205 VWSLGVVLWEIF 216
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288 |
| >gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 1e-06
Identities = 49/182 (26%), Positives = 80/182 (43%), Gaps = 40/182 (21%)
Query: 485 ESYDHFDKELAWHLFR------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
E + H +E + L R +++ L ++H +I+RDL P NI D + I + DFG
Sbjct: 79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFG 138
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLG 596
L K L ++ D+ F GT Y APE+ G+ K D ++LG
Sbjct: 139 LCK-LNMKDDDKTNTF--------------CGTPEYLAPELLLGHGYTKA---VDWWTLG 180
Query: 597 IVFFELWH---PF----STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649
++ +E+ PF M R+I+ L+ P + + + LL L+S P+
Sbjct: 181 VLLYEMLTGLPPFYDENVNEMYRKILQEPLR----FPDGFD---RDAKDLLIGLLSRDPT 233
Query: 650 DR 651
R
Sbjct: 234 RR 235
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312 |
| >gnl|CDD|173641 cd05072, PTKc_Lyn, Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 35/105 (33%), Positives = 51/105 (48%), Gaps = 21/105 (20%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 558
QI EG+A+I + IHRDL N+ KI DFGLA+ ++ + + A FP
Sbjct: 111 QIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIK- 169
Query: 559 GGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 602
+TAPE I G I K+D++S GI+ +E+
Sbjct: 170 ---------------WTAPEAINFGSFTI--KSDVWSFGILLYEI 197
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lyn is expressed in B lymphocytes and myeloid cells. It exhibits both positive and negative regulatory roles in B cell receptor (BCR) signaling. Lyn, as well as Fyn and Blk, promotes B cell activation by phosphorylating ITAMs (immunoreceptor tyr activation motifs) in CD19 and in Ig components of BCR. It negatively regulates signaling by its unique ability to phosphorylate ITIMs (immunoreceptor tyr inhibition motifs) in cell surface receptors like CD22 and CD5. Lyn also plays an important role in G-CSF receptor signaling by phosphorylating a variety of adaptor molecules. Length = 261 |
| >gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Score = 50.6 bits (121), Expect = 2e-06
Identities = 72/317 (22%), Positives = 129/317 (40%), Gaps = 68/317 (21%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
++ E L LG G +G V ++ G A+K+IRL+ N +I+ E+ L +
Sbjct: 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFN-QIIMELDILHKAVSP 59
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V +Y A+F G + M G+L A A E+ L
Sbjct: 60 YIVDFYGAFFIEGAVYMCMEYMDA-GSLDKLY----AGGVATEGIPEDVLRRI------- 107
Query: 475 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIK 533
+Y +V+GL + + IIHRD+ P N+ + +K
Sbjct: 108 -----------TY-------------AVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVK 143
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPK----IDE 588
+ DFG++ L S+ T +G Y APE I+ G P
Sbjct: 144 LCDFGVSGNLV----------------ASLAKT-NIGCQSYMAPERIKSGGPNQNPTYTV 186
Query: 589 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQ--KGELPPSWVAKFS-EQESLLRR 642
++D++SLG+ E+ +P+ I + L G+ PP+ + +S + + + +
Sbjct: 187 QSDVWSLGLSILEMALGRYPYPPETYANI-FAQLSAIVDGD-PPTLPSGYSDDAQDFVAK 244
Query: 643 LMSPSPSDRPSATELLQ 659
++ P+ RP+ +LL+
Sbjct: 245 CLNKIPNRRPTYAQLLE 261
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286 |
| >gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Score = 50.4 bits (120), Expect = 2e-06
Identities = 41/164 (25%), Positives = 74/164 (45%), Gaps = 20/164 (12%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
QI +G++++ ++HRDL N+ + N +KI DFGLA+ L +++ + A
Sbjct: 117 QIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHA-------- 168
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVL 616
DG G+V + I + ++D++S G+ +EL P+ R+I
Sbjct: 169 ---DG-GKVPIKWMALESILH--RRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREI-- 220
Query: 617 SDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
DL +KGE P + ++ + RP EL+ +
Sbjct: 221 PDLLEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279 |
| >gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Score = 49.8 bits (119), Expect = 2e-06
Identities = 45/179 (25%), Positives = 73/179 (40%), Gaps = 39/179 (21%)
Query: 486 SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 545
+ + +E ++V L +H +GI+ RDL PNNI D R I++ F ++
Sbjct: 78 KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVE- 136
Query: 546 EQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW-- 603
+ D +A Y APE+ G + E D +SLG + FEL
Sbjct: 137 DSCDGEAV-----------------ENMYCAPEV-GGISEETEACDWWSLGAILFELLTG 178
Query: 604 ------HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656
HP + + P WV++ E SLL++L+ +P++R A
Sbjct: 179 KTLVECHPSGINTHTTLNI----------PEWVSE--EARSLLQQLLQFNPTERLGAGV 225
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237 |
| >gnl|CDD|232978 TIGR00443, hisZ_biosyn_reg, ATP phosphoribosyltransferase, regulatory subunit | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 3e-06
Identities = 66/267 (24%), Positives = 106/267 (39%), Gaps = 43/267 (16%)
Query: 766 TVKLLTHGGDLLELSHELRLPFIRWAIS----NQKSSFKRYEISSVYRRA-IGHSPPNRY 820
KL G +L L ++ P R +S ++ + +V+R G +
Sbjct: 52 LFKLFDQLGRVLGLRPDMTAPIAR-LVSTRLRDRPLPLRLCYAGNVFRTNESGGGRSREF 110
Query: 821 LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN--HGDLLEAIWSWAGIKAE 878
Q ++IG +AEV+ + ++ + D + H L+ A+ AG+ E
Sbjct: 111 TQAGVELIGAGGPAADAEVIALLIEALKA---LGLKDFKIELGHVGLVRALLEEAGLPEE 167
Query: 879 HREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQ 938
RE + E LA K +V +L+ EL L+ V RL + R G ++
Sbjct: 168 AREALREALA-------------RKDLVALEELVAELGLSPEVRERLLAL-PRLRGDGEE 213
Query: 939 ALPRLRGALPADKPTRKALDELYLRIWRI------EKNIYID-ALMPPIESYHRNLFFQV 991
L R AL + ALDEL + + E+ I +D L+ Y+ L F+
Sbjct: 214 VLEEAR-ALAGSETAEAALDELE-AVLELLEARGVEEYISLDLGLVRGY-HYYTGLIFEG 270
Query: 992 FSVKEKYPATLVEGTLLAVGGRYDYLL 1018
++ P LA GGRYD LL
Sbjct: 271 YAPGLGAP--------LAGGGRYDELL 289
|
Apparant second copies of histidyl-tRNA synthetase, found in Bacillus subtilis, Synechocystis sp., Aquifex aeolicus, and others, are in fact a regulatory subunit of ATP phosphoribosyltransferase, and usually encoded by a gene adjacent to that encoding the catalytic subunit [Amino acid biosynthesis, Histidine family]. Length = 313 |
| >gnl|CDD|173645 cd05084, PTKc_Fes, Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 3e-06
Identities = 40/162 (24%), Positives = 70/162 (43%), Gaps = 24/162 (14%)
Query: 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564
G+ ++ + IHRDL N +N +KI DFG+++ +++ TGG+
Sbjct: 106 GMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSR-------EEEDGVYASTGGMK-- 156
Query: 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS------TAMERQIVLSD 618
Q+ +TAPE + + ++D++S GI+ LW FS + Q
Sbjct: 157 ---QIPVK-WTAPE-ALNYGRYSSESDVWSFGIL---LWEAFSLGAVPYANLSNQQTREA 208
Query: 619 LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
++Q LP + L+ R P RPS + + Q+
Sbjct: 209 IEQGVRLPCPELCP-DAVYRLMERCWEYDPGQRPSFSTVHQE 249
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular endothelial, epithelial, and neuronal cells. It plays important roles in cell growth and differentiation, angiogenesis, inflammation and immunity, and cytoskeletal regulation. A recent study implicates Fes kinase as a tumor suppressor in colorectal cancer. Length = 252 |
| >gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 3e-06
Identities = 57/245 (23%), Positives = 92/245 (37%), Gaps = 52/245 (21%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+I L +H +GII+RDL +N+ DA IK+ D+G+ K + P DT
Sbjct: 104 EISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCK---------EGIRPGDTTS 154
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW-------------HP-- 605
GT Y APEI +G D ++LG++ FE+ +P
Sbjct: 155 TF------CGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQ 207
Query: 606 ------FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
F +E+QI +P S K S S+L+ ++ P +R Q
Sbjct: 208 NTEDYLFQVILEKQI---------RIPRSLSVKAS---SVLKGFLNKDPKERLGC--HPQ 253
Query: 660 DALPPQMEYELLDNI-LRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSS 718
+ NI ++ + Y + S D + D + ++L D+
Sbjct: 254 TGFRDIKSHPFFRNIDWDLLEQKQVLPPYKPNIESDRDLDNFDPQFTDEPVQLTPDDPDV 313
Query: 719 IQYSD 723
I D
Sbjct: 314 IARID 318
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329 |
| >gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Score = 49.9 bits (119), Expect = 3e-06
Identities = 34/155 (21%), Positives = 64/155 (41%), Gaps = 25/155 (16%)
Query: 469 LYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
LYI E+ L + + K++ + + + EG+ ++ IHRDL N
Sbjct: 74 LYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLV 133
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQD--AAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584
+ +K+ DFG+ +++ ++ A FP ++ PE+ +
Sbjct: 134 SSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVK----------------WSPPEVFN-FS 176
Query: 585 KIDEKADMYSLGI----VFFELWHPFSTAMERQIV 615
K K+D++S G+ VF E PF ++V
Sbjct: 177 KYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVV 211
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256 |
| >gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Score = 49.7 bits (118), Expect = 4e-06
Identities = 48/246 (19%), Positives = 94/246 (38%), Gaps = 58/246 (23%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ + +G G G V + G+ A+K+I L+ + P + I+ E+ + L++ ++
Sbjct: 21 YTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNI 78
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V + ++ + G E L++ MEY
Sbjct: 79 VNFLDSF---------------------------------LVGDE-------LFVVMEYL 98
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
+ D+ + R+ ++ L +H +IHRD+ +N+ +K+ D
Sbjct: 99 AGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTD 158
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FG + EQ + + VGT ++ APE+ K D++SLG
Sbjct: 159 FGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTR-KAYGPKVDIWSLG 202
Query: 597 IVFFEL 602
I+ E+
Sbjct: 203 IMAIEM 208
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296 |
| >gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 5e-06
Identities = 53/185 (28%), Positives = 73/185 (39%), Gaps = 33/185 (17%)
Query: 363 LGHGGFGHVVL--CKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417
LG G FG V L C N L D AVK LK+ S RE L+ LQHQH+V
Sbjct: 13 LGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTVLQHQHIV 70
Query: 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC- 476
R+Y GV +G + NR S G + K+ + +
Sbjct: 71 RFY------GVCT-EGRPLLMVFEYMRHGDLNRFLRSH---GPDAKILAGG---EDVAPG 117
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
TL Q+ + QI G+ ++ +HRDL N +KIGD
Sbjct: 118 QLTLGQML------------AIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGD 165
Query: 537 FGLAK 541
FG+++
Sbjct: 166 FGMSR 170
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280 |
| >gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.9 bits (117), Expect = 5e-06
Identities = 43/178 (24%), Positives = 69/178 (38%), Gaps = 53/178 (29%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
Q+ G+A++ + +HRDL N+ R+ KI DFG+++ L
Sbjct: 103 QVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALG---------------- 146
Query: 561 VSVDGTGQVGTYFYTAPEIEQG--WP------------KIDEKADMYSLGIVFFELWHPF 606
G+ +Y A WP K K+D++S G+ LW F
Sbjct: 147 --------AGSDYYRA---TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVT---LWEAF 192
Query: 607 STA------MERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657
S M+ V++ L+ LP P + E S++ P DRP+ +EL
Sbjct: 193 SYGAKPYGEMKGAEVIAMLESGERLPRPEECPQ--EIYSIMLSCWKYRPEDRPTFSEL 248
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257 |
| >gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Score = 49.6 bits (118), Expect = 5e-06
Identities = 52/202 (25%), Positives = 81/202 (40%), Gaps = 52/202 (25%)
Query: 479 TLRQVFESYDHF--------DKELAWHLFRQ--------------IVEGLAHIHGQGIIH 516
L+ F+++D EL +HL R+ IV L ++H + +++
Sbjct: 59 ALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVY 118
Query: 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576
RD+ N+ D IKI DFGL K E + A T GT Y A
Sbjct: 119 RDIKLENLMLDKDGHIKITDFGLCK----EGISDGATMKT-----------FCGTPEYLA 163
Query: 577 PEIEQGWPKIDEKADMYSLGIVFFELW---HPF-STAMER---QIVLSDLKQKGELPPSW 629
PE+ + D + LG+V +E+ PF + ER I++ +++ L P
Sbjct: 164 PEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSP-- 220
Query: 630 VAKFSEQESLLRRLMSPSPSDR 651
E +SLL L+ P R
Sbjct: 221 -----EAKSLLAGLLKKDPKQR 237
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323 |
| >gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Score = 48.8 bits (116), Expect = 6e-06
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 25/177 (14%)
Query: 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD 549
F +E + + EG+A++ +IHRDL N +K+ DFG+ +F+ +Q
Sbjct: 97 FSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY- 155
Query: 550 QDAAFPTDTGGVSVDGTGQVGTYF---YTAPEIEQGWPKIDEKADMYSLGIVFFELWHPF 606
T GT F +++PE+ + K K+D++S G++ +E++
Sbjct: 156 ----------------TSSTGTKFPVKWSSPEVFS-FSKYSSKSDVWSFGVLMWEVFSEG 198
Query: 607 STAMERQI---VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
T E + V+ + L +A S E L++ P DRPS + LL
Sbjct: 199 KTPYENRSNSEVVETINAGFRLYKPRLASQSVYE-LMQHCWKERPEDRPSFSLLLHQ 254
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256 |
| >gnl|CDD|215638 PLN03225, PLN03225, Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Score = 50.2 bits (120), Expect = 6e-06
Identities = 46/203 (22%), Positives = 74/203 (36%), Gaps = 38/203 (18%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV---NDRILREVATLSR 410
+DF + LG G FG V + V K K+ + + E+ R
Sbjct: 131 KDDFVLGKKLGEGAFGVVY--------KASLVNKQSKKEGKYVLKKATEYGAVEIWMNER 182
Query: 411 LQH--QHVVRYYQAWFETGVADFDGDSMW------GSGTLASSTFSNRAASSADVTGQEN 462
++ + + F V+ D W G TLA S + +
Sbjct: 183 VRRACPNSCADFVYGFLEPVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVE------ 236
Query: 463 KLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 522
YL +++ P+ L + + ++ + RQI+ L +H GI+HRD+ P
Sbjct: 237 ----PYLLGKVQDLPKGLER--------ENKIIQTIMRQILFALDGLHSTGIVHRDVKPQ 284
Query: 523 NIFFD-ARNDIKIGDFGLAKFLK 544
NI F KI D G A L+
Sbjct: 285 NIIFSEGSGSFKIIDLGAAADLR 307
|
Length = 566 |
| >gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 6e-06
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 25/159 (15%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 558
QI +G+A+I IHRDL NI KI DFGLA+ ++ + Q A FP
Sbjct: 110 QIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIK- 168
Query: 559 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQI 614
+TAPE + + K+D++S GI+ EL P+ + R+
Sbjct: 169 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE- 211
Query: 615 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653
VL +++ +P S E L++ P +RP+
Sbjct: 212 VLEQVERGYRMPCPQGCPESLHE-LMKLCWKKDPDERPT 249
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260 |
| >gnl|CDD|133204 cd05073, PTKc_Hck, Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Score = 48.9 bits (116), Expect = 6e-06
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 28/169 (16%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQL--DQDAAFPTDT 558
QI EG+A I + IHRDL NI A KI DFGLA+ ++ + + A FP
Sbjct: 110 QIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIK- 168
Query: 559 GGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQ 613
+TAPE I G I K+D++S GI+ E+ P+ +
Sbjct: 169 ---------------WTAPEAINFGSFTI--KSDVWSFGILLMEIVTYGRIPYPGMSNPE 211
Query: 614 IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662
++ + ++G P E +++ R P +RP+ E +Q L
Sbjct: 212 VIRA--LERGYRMPRPENCPEELYNIMMRCWKNRPEERPT-FEYIQSVL 257
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Hck is present in myeloid and lymphoid cells that play a role in the development of cancer. It may be important in the oncogenic signaling of the protein Tel-Abl, which induces a chronic myelogenous leukemia (CML)-like disease. Hck also acts as a negative regulator of granulocyte colony-stimulating factor (G-CSF)-induced proliferation of granulocytic precursors, suggesting a possible role in the development of acute myeloid leukemia (AML). In addition, Hck is essential in regulating the degranulation of polymorphonuclear leukocytes (PMNs). Genetic polymorphisms affect the expression level of Hck, which affects PMN mediator release and influences the development of chronic obstructive pulmonary disease (COPD). Length = 260 |
| >gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 49.0 bits (117), Expect = 7e-06
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543
QI +G++++ + ++HRDL N+ +KI DFGLAK L
Sbjct: 116 VQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279 |
| >gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Score = 48.7 bits (116), Expect = 7e-06
Identities = 58/250 (23%), Positives = 101/250 (40%), Gaps = 69/250 (27%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
L+ LG G FG V K + G++ A+K I+ S D + E + +L H+ +V+
Sbjct: 9 LKELGTGQFGVVKYGKWR--GQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQ 63
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
Y GV T Q +YI EY
Sbjct: 64 LY------GVC----------------------------TKQRP------IYIVTEYMSN 83
Query: 479 --TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L + E F + + + EG+A++ + IHRDL N D + +K+ D
Sbjct: 84 GCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSD 143
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPEIEQGWPKIDEKADMY 593
FGL++++ LD + T VG+ F ++ PE+ + K K+D++
Sbjct: 144 FGLSRYV----LDDEY-------------TSSVGSKFPVRWSPPEVLL-YSKFSSKSDVW 185
Query: 594 SLGIVFFELW 603
+ G++ +E++
Sbjct: 186 AFGVLMWEVY 195
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256 |
| >gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 48.5 bits (116), Expect = 7e-06
Identities = 73/321 (22%), Positives = 121/321 (37%), Gaps = 98/321 (30%)
Query: 363 LGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQHQHVV 417
+G G FG V + KL G+ A+K LK S R+ L E + + + H +++
Sbjct: 12 IGGGEFGEVCRGRLKLPGKKEIDVAIKT--LKAGSSD-KQRLDFLTEASIMGQFDHPNII 68
Query: 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 477
R GV VT +S + I EY
Sbjct: 69 RLE------GV----------------------------VT------KSRPVMIITEY-- 86
Query: 478 RTLRQVFESYDHF----DKELAW----HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
S D F D + + R I G+ ++ +HRDL NI ++
Sbjct: 87 ----MENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSN 142
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
K+ DFGL++ L+ D +A + T G + + +TAPE + K
Sbjct: 143 LVCKVSDFGLSRRLE----DSEATYTTKGGKIPIR---------WTAPEAIA-YRKFTSA 188
Query: 590 ADMYSLGIVFFEL--------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 641
+D++S GIV +E+ W M Q V+ ++ LPP + S L
Sbjct: 189 SDVWSFGIVMWEVMSYGERPYWD-----MSNQDVIKAVEDGYRLPPP-----MDCPSALY 238
Query: 642 RLM----SPSPSDRPSATELL 658
+LM ++RP+ ++++
Sbjct: 239 QLMLDCWQKDRNERPTFSQIV 259
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266 |
| >gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 8e-06
Identities = 43/193 (22%), Positives = 70/193 (36%), Gaps = 43/193 (22%)
Query: 360 LQPLGHGGFGHVVL--CKNKLDGRHYAVKKIR-LKDKSLPVNDR-ILREVATLSRLQHQH 415
+ LG G FG V L C + + ++ LK+ + + RE L+ QH++
Sbjct: 10 KRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHEN 69
Query: 416 VVRYYQAWFETGVADFDGDSMW------GSGTLASSTFSN-RAASSADVTGQENKLESTY 468
+V++Y GV +GD G L S+ A+
Sbjct: 70 IVKFY------GVC-TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMG----- 117
Query: 469 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
TL Q+ + QI G+ ++ Q +HRDL N
Sbjct: 118 --------ELTLSQLL------------QIAVQIASGMVYLASQHFVHRDLATRNCLVGY 157
Query: 529 RNDIKIGDFGLAK 541
+KIGDFG+++
Sbjct: 158 DLVVKIGDFGMSR 170
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280 |
| >gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Score = 48.6 bits (115), Expect = 9e-06
Identities = 64/309 (20%), Positives = 113/309 (36%), Gaps = 67/309 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ + +G G G V + G+ A++++ L+ + P + I+ E+ + ++ ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNI 79
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V Y ++ GD +W + MEY
Sbjct: 80 VNYLDSYLV-------GDELW---------------------------------VVMEYL 99
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
+ D+ + R+ ++ L +H +IHRD+ +NI +K+ D
Sbjct: 100 AGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTD 159
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FG + EQ + + VGT ++ APE+ K D++SLG
Sbjct: 160 FGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTR-KAYGPKVDIWSLG 203
Query: 597 IVFFELWH---PFSTAME-RQIVLSDLKQKGEL--PPSWVAKFSEQESLLRRLMSPSPSD 650
I+ E+ P+ R + L EL P A F + L R +
Sbjct: 204 IMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRD---FLNRCLDMDVEK 260
Query: 651 RPSATELLQ 659
R SA ELLQ
Sbjct: 261 RGSAKELLQ 269
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296 |
| >gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 1e-05
Identities = 57/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ + + LQ +G G FG V+L + G AVK I K+ L E + +++L+H
Sbjct: 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCI----KNDATAQAFLAEASVMTQLRH 58
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V+ E E LYI
Sbjct: 59 SNLVQLLGVIVE---------------------------------------EKGGLYIVT 79
Query: 474 EYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
EY + +L S + + E + ++ +HRDL N+ N
Sbjct: 80 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDN 139
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
K+ DFGL K +A+ DTG + V +TAPE + K K+
Sbjct: 140 VAKVSDFGLTK---------EASSTQDTGKLPVK---------WTAPEALRE-KKFSTKS 180
Query: 591 DMYSLGIVFFELW 603
D++S GI+ +E++
Sbjct: 181 DVWSFGILLWEIY 193
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256 |
| >gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 1e-05
Identities = 29/105 (27%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 557
+ R I G+ ++ +HRDL NI ++ + K+ DFGL++ L + D + + T
Sbjct: 112 MLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVL---EDDPEGTYTTS 168
Query: 558 TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
G + + +TAPE + K +D++S GIV +E+
Sbjct: 169 GGKIPIR---------WTAPE-AIAYRKFTSASDVWSFGIVMWEV 203
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268 |
| >gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Score = 48.2 bits (114), Expect = 1e-05
Identities = 67/310 (21%), Positives = 117/310 (37%), Gaps = 69/310 (22%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ + +G G G V + G+ A+K++ L+ + P + I+ E+ + ++ ++
Sbjct: 21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKNPNI 78
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V Y ++ GD +W + MEY
Sbjct: 79 VNYLDSYLV-------GDELW---------------------------------VVMEYL 98
Query: 477 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
+L V + ++A + R+ ++ L +H +IHRD+ +NI +K+
Sbjct: 99 AGGSLTDVVTETCMDEGQIA-AVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLT 157
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFG + EQ + + VGT ++ APE+ K D++SL
Sbjct: 158 DFGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTR-KAYGPKVDIWSL 201
Query: 596 GIVFFELWH---PFSTAME-RQIVLSDLKQKGEL--PPSWVAKFSEQESLLRRLMSPSPS 649
GI+ E+ P+ R + L EL P A F + L R +
Sbjct: 202 GIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRD---FLNRCLEMDVD 258
Query: 650 DRPSATELLQ 659
R SA ELLQ
Sbjct: 259 RRGSAKELLQ 268
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297 |
| >gnl|CDD|226168 COG3642, COG3642, Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 1e-05
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 9/73 (12%)
Query: 471 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
I MEY L+ E E L R++ + +H GI+H DLT +NI
Sbjct: 76 IVMEYIEGELLKDALE-------EARPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGG 128
Query: 530 NDIKIGDFGLAKF 542
I DFGL +F
Sbjct: 129 RIYFI-DFGLGEF 140
|
Length = 204 |
| >gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Score = 48.1 bits (114), Expect = 2e-05
Identities = 32/102 (31%), Positives = 51/102 (50%), Gaps = 16/102 (15%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+I L ++H +GII+RDL +N+ D+ IK+ D+G+ K + P DT
Sbjct: 104 EISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK---------EGLRPGDT-- 152
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
+ GT Y APEI +G D ++LG++ FE+
Sbjct: 153 ----TSTFCGTPNYIAPEILRG-EDYGFSVDWWALGVLMFEM 189
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329 |
| >gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Score = 47.9 bits (114), Expect = 2e-05
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 44/180 (24%)
Query: 493 ELAWHLFR--------------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
EL +HL R +IV L ++H +++RDL N+ D IKI DFG
Sbjct: 81 ELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFG 140
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598
L K E + A T GT Y APE+ + D + LG+V
Sbjct: 141 LCK----EGISDGATMKT-----------FCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184
Query: 599 FFELW---HPF-STAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
+E+ PF + E+ I++ +++ L P E +SLL L+ P R
Sbjct: 185 MYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLSP-------EAKSLLAGLLKKDPKQR 237
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323 |
| >gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Score = 47.3 bits (112), Expect = 2e-05
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+I L +H +GII+RDL +N+ DA IK+ D+G+ K + P DT
Sbjct: 104 EICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCK---------EGLGPGDTTS 154
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
GT Y APEI +G + D ++LG++ FE+
Sbjct: 155 TF------CGTPNYIAPEILRG-EEYGFSVDWWALGVLMFEM 189
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327 |
| >gnl|CDD|133201 cd05070, PTKc_Fyn_Yrk, Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 4e-05
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 19/104 (18%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 558
Q+ G+A+I IHRDL NI KI DFGLA+ ++ + Q A FP
Sbjct: 110 QVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIK- 168
Query: 559 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
+TAPE + + K+D++S GI+ EL
Sbjct: 169 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTEL 196
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Length = 260 |
| >gnl|CDD|173631 cd05045, PTKc_RET, Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 6e-05
Identities = 73/315 (23%), Positives = 129/315 (40%), Gaps = 57/315 (18%)
Query: 363 LGHGGFGHVVLC-KNKLDGR----HYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQHV 416
LG G FG VV +L GR AVK LK+ + R +L E L ++ H HV
Sbjct: 8 LGEGEFGKVVKATAFRLKGRAGYTTVAVKM--LKENASSSELRDLLSEFNLLKQVNHPHV 65
Query: 417 VRYYQAWFETG----VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
++ Y A + G + ++ + +GS L S +R + + G + S+YL
Sbjct: 66 IKLYGACSQDGPLLLIVEY---AKYGS--LRSFLRESRKVGPSYL-GSDGNRNSSYLDNP 119
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
E T+ + AW QI G+ ++ ++HRDL N+ +
Sbjct: 120 DER-ALTMGDLIS--------FAW----QISRGMQYLAEMKLVHRDLAARNVLVAEGRKM 166
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD--GTGQVGTYFYTAPEIEQGWPKIDEKA 590
KI DFGL++ + ++D+ G + V + + YT ++
Sbjct: 167 KISDFGLSR----DVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTT------------QS 210
Query: 591 DMYSLGIVFFEL----WHPF-STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645
D++S G++ +E+ +P+ A ER L + E P + E +L+
Sbjct: 211 DVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTGYRMERPENCS---EEMYNLMLTCWK 267
Query: 646 PSPSDRPSATELLQD 660
P RP+ ++ ++
Sbjct: 268 QEPDKRPTFADISKE 282
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leading to autophosphorylation, activation, and intracellular signaling. RET is essential for the development of the sympathetic, parasympathetic and enteric nervous systems, and the kidney. RET disruption by germline mutations causes diseases in humans including congenital aganglionosis of the gastrointestinal tract (Hirschsprung's disease) and three related inherited cancers: multiple endocrine neoplasia type 2A (MEN2A), MEN2B, and familial medullary thyroid carcinoma (FMTC). Length = 290 |
| >gnl|CDD|133202 cd05071, PTKc_Src, Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 7e-05
Identities = 45/171 (26%), Positives = 73/171 (42%), Gaps = 32/171 (18%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLD--QDAAFPTDT 558
QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q A FP
Sbjct: 110 QIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIK- 168
Query: 559 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQI 614
+TAPE + + K+D++S GI+ EL P+ + R++
Sbjct: 169 ---------------WTAPEAAL-YGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV 212
Query: 615 VLSDLKQKG---ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662
+ D ++G PP + L+ + P +RP+ E LQ L
Sbjct: 213 L--DQVERGYRMPCPPECPESLHD---LMCQCWRKEPEERPT-FEYLQAFL 257
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Length = 262 |
| >gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 8e-05
Identities = 56/248 (22%), Positives = 95/248 (38%), Gaps = 60/248 (24%)
Query: 363 LGHGGFGHVV--LCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 420
LG G FG V + K K + AVK ++ + + D +LRE + +L + ++VR
Sbjct: 3 LGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRM- 61
Query: 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM-EYCPRT 479
G+ + ES L +++ E P
Sbjct: 62 -----IGICE---------------------------------AESWMLVMELAELGP-- 81
Query: 480 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 539
L + + H ++ L Q+ G+ ++ +HRDL N+ ++ KI DFGL
Sbjct: 82 LNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGL 141
Query: 540 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 599
+K A D G+ +Y APE + K K+D++S G++
Sbjct: 142 SK-----------ALGADENYYKAKTHGKWPVKWY-APEC-MNYYKFSSKSDVWSFGVL- 187
Query: 600 FELWHPFS 607
+W FS
Sbjct: 188 --MWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257 |
| >gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Score = 46.2 bits (109), Expect = 9e-05
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 18/121 (14%)
Query: 485 ESYDHFDKELAWH---LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
E++D D+ L + +Q++ + +IH + +IHRD+ NIF + I +GDFG A
Sbjct: 256 EAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAM 315
Query: 542 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 601
+ E+ D G VGT +PEI G E D++S G++ +
Sbjct: 316 PFEKEREAFD--------------YGWVGTVATNSPEILAG-DGYCEITDIWSCGLILLD 360
Query: 602 L 602
+
Sbjct: 361 M 361
|
Length = 501 |
| >gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Score = 45.8 bits (108), Expect = 9e-05
Identities = 77/320 (24%), Positives = 123/320 (38%), Gaps = 74/320 (23%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
LG G FG V+L K K GR+YA+ KI LK + + D EVA L V++ +
Sbjct: 3 LGKGTFGKVILVKEKATGRYYAM-KI-LKKEVIVAKD----EVA--HTLTENRVLQNSRH 54
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ 482
F T + + T F A+ ++ + ++ E
Sbjct: 55 PFLTALK-------YSFQTHDRLCFVMEYANGGEL----------FFHLSRERV------ 91
Query: 483 VFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
F ++ A +IV L ++H + +++RDL N+ D IKI DFGL K
Sbjct: 92 -------FSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK 144
Query: 542 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 601
E + A T GT Y APE+ + D + LG+V +E
Sbjct: 145 ----EGIKDGATMKT-----------FCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYE 188
Query: 602 LW---HPFSTAMERQ----IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR--- 651
+ PF + I++ +++ L P E +SLL L+ P R
Sbjct: 189 MMCGRLPFYNQDHEKLFELILMEEIRFPRTLSP-------EAKSLLSGLLKKDPKQRLGG 241
Query: 652 --PSATELLQDALPPQMEYE 669
A E++Q + ++
Sbjct: 242 GPDDAKEIMQHKFFAGIVWQ 261
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325 |
| >gnl|CDD|236586 PRK09605, PRK09605, bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Score = 46.0 bits (110), Expect = 1e-04
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 17/88 (19%)
Query: 456 DVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514
DV +E I MEY + L+ V E + EL R++ E +A +H GI
Sbjct: 405 DVDPEEKT-------IVMEYIGGKDLKDVLEG----NPELV----RKVGEIVAKLHKAGI 449
Query: 515 IHRDLTPNNIFFDARNDIKIGDFGLAKF 542
+H DLT +N + + + DFGL K+
Sbjct: 450 VHGDLTTSNFIVR-DDRLYLIDFGLGKY 476
|
Length = 535 |
| >gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 23/161 (14%)
Query: 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564
G+A++ + IHRDL N N +KI DFG+++ D G S
Sbjct: 105 GMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSR-------------QEDDGIYSSS 151
Query: 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGE 624
G Q+ +TAPE + + ++D++S GI+ LW FS + +++ + + +
Sbjct: 152 GLKQIPIK-WTAPE-ALNYGRYSSESDVWSYGIL---LWETFSLGVCPYPGMTNQQAREQ 206
Query: 625 LPPSWVAKFSEQ-----ESLLRRLMSPSPSDRPSATELLQD 660
+ + ++ +++R P +RP +EL ++
Sbjct: 207 VEKGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250 |
| >gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (107), Expect = 1e-04
Identities = 60/254 (23%), Positives = 90/254 (35%), Gaps = 70/254 (27%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN----DRILREVATLSRL 411
DF ++ LG G FG V+L K + I+ +KS + D + E L+ +
Sbjct: 31 DFNFIRTLGTGSFGRVILATYK--NEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYI 88
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H V Y F +S YLY+
Sbjct: 89 NHPFCVNLY--------GSFKDES--------------------------------YLYL 108
Query: 472 QMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
+E+ F ++ QIV ++ I++RDL P N+ D
Sbjct: 109 VLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDG 168
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDE 588
IK+ DFG AK + DT ++ GT + Y APEI G K
Sbjct: 169 FIKMTDFGFAKVV-------------DTRTYTLCGTPE-----YIAPEILLNVGHGK--- 207
Query: 589 KADMYSLGIVFFEL 602
AD ++LGI +E+
Sbjct: 208 AADWWTLGIFIYEI 221
|
Length = 340 |
| >gnl|CDD|133178 cd05046, PTK_CCK4, Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Score = 44.8 bits (106), Expect = 1e-04
Identities = 45/178 (25%), Positives = 73/178 (41%), Gaps = 42/178 (23%)
Query: 497 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK------FLKLEQLDQ 550
L QI G+ H+ +HRDL N ++ ++K+ L+K + KL
Sbjct: 121 ALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRN--- 177
Query: 551 DAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PF 606
A P + APE Q K+D++S G++ +E++ PF
Sbjct: 178 -ALIPLR----------------WLAPEAVQE-DDFSTKSDVWSFGVLMWEVFTQGELPF 219
Query: 607 STAMERQIVLSDLKQKG-ELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 659
+ + VL+ L+ ELP S L +LM + +P DRPS +EL+
Sbjct: 220 YGLSDEE-VLNRLQAGKLELPVP-----EGCPSRLYKLMTRCWAVNPKDRPSFSELVS 271
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is still unknown. Other pseudokinases such as HER3 rely on the activity of partner RTKs. Length = 275 |
| >gnl|CDD|173632 cd05051, PTKc_DDR, Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-04
Identities = 46/206 (22%), Positives = 63/206 (30%), Gaps = 69/206 (33%)
Query: 361 QPLGHGGFGHVVLCKN-----------KLDGRH-----YAVKKIRLKDKSLPVNDRILRE 404
+ LG G FG V LC+ + AVK +R D S + L+E
Sbjct: 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLR-PDASDNAREDFLKE 69
Query: 405 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 464
V LSRL ++ R L T
Sbjct: 70 VKILSRLSDPNIAR----------------------LLGVCT------------------ 89
Query: 465 ESTYLYIQMEY-CPRTLRQVFESYDHFDKELAW-----------HLFRQIVEGLAHIHGQ 512
L + MEY L Q + + LA ++ QI G+ ++
Sbjct: 90 VDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL 149
Query: 513 GIIHRDLTPNNIFFDARNDIKIGDFG 538
+HRDL N IKI DFG
Sbjct: 150 NFVHRDLATRNCLVGKNYTIKIADFG 175
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including breast, colon, ovarian, brain, and lung. There is no evidence showing that DDRs act as transforming oncogenes. They are more likely to play a role in the regulation of tumor growth and metastasis. Length = 296 |
| >gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Score = 45.0 bits (106), Expect = 1e-04
Identities = 49/211 (23%), Positives = 90/211 (42%), Gaps = 28/211 (13%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
QI +G+ ++ + ++HRDL N+ +KI DFGLAK L ++ + + G
Sbjct: 117 QIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADE----KEYHAEGGK 172
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVL 616
V + + A E ++D++S G+ +EL P+ +I
Sbjct: 173 VPIK---------WMALESILHR-IYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEI-- 220
Query: 617 SDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL----QDALPPQMEYELL 671
S + +KGE LP + +++ M RP EL+ + A PQ Y ++
Sbjct: 221 SSILEKGERLPQPPICTIDVYMIMVKCWMI-DADSRPKFRELIIEFSKMARDPQ-RYLVI 278
Query: 672 DNILRM-MHSSEDTSIYDKVVSSIFDEETLD 701
RM + S D++ Y ++ ++ +D
Sbjct: 279 QGDERMHLPSPTDSNFYRALMDEEDMDDVVD 309
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316 |
| >gnl|CDD|133227 cd05096, PTKc_DDR1, Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Score = 44.9 bits (106), Expect = 1e-04
Identities = 52/218 (23%), Positives = 82/218 (37%), Gaps = 53/218 (24%)
Query: 348 LPSSRYLNDFEELQPLGHGGFGHVVLCK--------------NKLDGRHY--AVKKIRLK 391
P L F+E LG G FG V LC+ N GR AVK +R
Sbjct: 2 FPRGHLL--FKE--KLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILR-P 56
Query: 392 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG----VADF--DGDSMWGSGTLASS 445
D + + L+EV LSRL+ +++R + + ++ +GD + L+S
Sbjct: 57 DANKNARNDFLKEVKILSRLKDPNIIRLLGVCVDEDPLCMITEYMENGDL---NQFLSSH 113
Query: 446 TFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 505
++ + D + L + SY H+ QI G
Sbjct: 114 HLDDKEENGNDAVPPAHCLPAI------------------SY-----SSLLHVALQIASG 150
Query: 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543
+ ++ +HRDL N IKI DFG+++ L
Sbjct: 151 MKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNL 188
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in keratinocytes, colonic mucosa epithelium, lung epithelium, thyroid follicles, and the islets of Langerhans. During embryonic development, it is found in the developing neuroectoderm. DDR1 is a key regulator of cell morphogenesis, differentiation and proliferation. It is important in the development of the mammary gland, the vasculator and the kidney. DDR1 is also found in human leukocytes, where it facilitates cell adhesion, migration, maturation, and cytokine production. Length = 304 |
| >gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Score = 44.7 bits (105), Expect = 2e-04
Identities = 42/154 (27%), Positives = 65/154 (42%), Gaps = 22/154 (14%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+IV L ++H I++RDL N+ D IKI DFGL K E + A T
Sbjct: 103 EIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCK----EGITDAATMKT---- 154
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLS 617
GT Y APE+ + D + LG+V +E+ PF ++
Sbjct: 155 -------FCGTPEYLAPEVLED-NDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFEL 206
Query: 618 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
L + + P + ++ +SLL L+ P+ R
Sbjct: 207 ILMEDIKFPRTLS---ADAKSLLSGLLIKDPNKR 237
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328 |
| >gnl|CDD|133246 cd05115, PTKc_Zap-70, Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Score = 44.2 bits (104), Expect = 2e-04
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 557
L Q+ G+ ++ G+ +HRDL N+ ++ KI DFGL+K L + D+ +
Sbjct: 100 LMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGAD----DSYYKAR 155
Query: 558 TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 607
+ G+ +Y APE + K ++D++S GI +W FS
Sbjct: 156 SA-------GKWPLKWY-APECIN-FRKFSSRSDVWSYGIT---MWEAFS 193
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its phosphorylation and activation. It then phosphorylates target proteins, which propagate the signals to downstream pathways. Zap-70 is hardly detected in normal peripheral B-cells, but is present in some B-cell malignancies. It is used as a diagnostic marker for chronic lymphocytic leukemia (CLL) as it is associated with the more aggressive subtype of the disease. Length = 257 |
| >gnl|CDD|133187 cd05056, PTKc_FAK, Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 2e-04
Identities = 43/195 (22%), Positives = 86/195 (44%), Gaps = 23/195 (11%)
Query: 469 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLF-RQIVEGLAHIHGQGIIHRDLTPNNIFF 526
++I ME P LR + + + L+ Q+ LA++ + +HRD+ N+
Sbjct: 81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLV 140
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586
+ + +K+GDFGL+++ L+ ++ + G + + + APE + +
Sbjct: 141 SSPDCVKLGDFGLSRY-----LEDESYYKASKGKLPIK---------WMAPE-SINFRRF 185
Query: 587 DEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642
+D++ G+ +E+ PF ++ V+ ++ GE P SL+ +
Sbjct: 186 TSASDVWMFGVCMWEILMLGVKPFQ-GVKNNDVIGRIEN-GERLPMPPNCPPTLYSLMTK 243
Query: 643 LMSPSPSDRPSATEL 657
+ PS RP TEL
Sbjct: 244 CWAYDPSKRPRFTEL 258
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions and at growth factor receptors. Through diverse molecular interactions, FAK functions as a biosensor or integrator to control cell motility. It is a key regulator of cell survival, proliferation, migration and invasion, and thus plays an important role in the development and progression of cancer. Src binds to autophosphorylated FAK forming the FAK-Src dual kinase complex, which is activated in a wide variety of tumor cells and generates signals promoting growth and metastasis. FAK is being developed as a target for cancer therapy. Length = 270 |
| >gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 3e-04
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 22/106 (20%)
Query: 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 561
+ EG+ ++ + ++HRDL NI K+ DFGLA+ + D +
Sbjct: 109 VAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARV---------GSMGVDNSKL 159
Query: 562 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFS 607
V +TAPE + K K+D++S G++ LW FS
Sbjct: 160 PVK---------WTAPEALKH-KKFSSKSDVWSYGVL---LWEVFS 192
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254 |
| >gnl|CDD|202547 pfam03129, HGTP_anticodon, Anticodon binding domain | Back alignment and domain information |
|---|
Score = 40.6 bits (96), Expect = 3e-04
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 1/91 (1%)
Query: 1067 VLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDT 1126
V++ L +L EL E I+ + + SL +++ A I +++ +
Sbjct: 3 VVIPLGEKDELEDYAQKLAEELREAGIRVELDDR-NESLGKKFRDADLIGIPFRLVVGEK 61
Query: 1127 GAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1157
+ G V VR D +++ V E LV L +
Sbjct: 62 ELENGTVTVRDRDTGEKETVSLEELVEKLKE 92
|
This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases it is probably the anticodon binding domain. Length = 93 |
| >gnl|CDD|165211 PHA02882, PHA02882, putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (102), Expect = 4e-04
Identities = 22/76 (28%), Positives = 39/76 (51%)
Query: 468 YLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
Y +I +E +++F+ +K+L ++ + ++ L +IH GI H D+ P NI D
Sbjct: 101 YRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD 160
Query: 528 ARNDIKIGDFGLAKFL 543
N I D+G+A
Sbjct: 161 GNNRGYIIDYGIASHF 176
|
Length = 294 |
| >gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Score = 44.3 bits (104), Expect = 4e-04
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLA 540
+ RQ++ GL +H GI+HRD+ P N+ +KI DFG A
Sbjct: 314 VMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAA 356
|
Length = 507 |
| >gnl|CDD|240159 cd05120, APH_ChoK_like, Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 470 YIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH---GQGIIHRDLTPNNIF 525
Y+ ME+ TL +V +KE + Q+ E LA +H + H DL P NI
Sbjct: 69 YLLMEWIEGETLDEV----SEEEKE---DIAEQLAELLAKLHQLPLLVLCHGDLHPGNIL 121
Query: 526 FDARNDIKIGDFGLAKF 542
D + I D+ A +
Sbjct: 122 VDDGKILGIIDWEYAGY 138
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves as precursors to the synthesis of important biological compounds, such as the major phospholipids, phosphatidylcholine and phosphatidylethanolamine and the amino acids, threonine, methionine, and isoleucine. Length = 155 |
| >gnl|CDD|237097 PRK12420, PRK12420, histidyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 43.6 bits (103), Expect = 6e-04
Identities = 34/132 (25%), Positives = 61/132 (46%), Gaps = 10/132 (7%)
Query: 728 LRDYVVQVTKEMFRQHCAKHLEIEPMYLL-------GDCPQFKRNTVKLLTHGGDLLELS 780
LR+ + + +++F ++ K LE + + G + + L G L L
Sbjct: 20 LRNKIKRALEDVFERYGCKPLETPTLNMYELMSSKYGGGDEILKEIYTLTDQGKRDLALR 79
Query: 781 HELRLPFIRWAISNQ--KSSFKRYEISSVYRRA-IGHSPPNRYLQGDFDIIGGASALTEA 837
++L +PF + N + FKRYEI V+R I ++Q D DI+G S + EA
Sbjct: 80 YDLTIPFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVESVMAEA 139
Query: 838 EVLKVTMDIVTR 849
E++ + ++ R
Sbjct: 140 ELMSMAFELFRR 151
|
Length = 423 |
| >gnl|CDD|173652 cd05100, PTKc_FGFR3, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Score = 43.1 bits (101), Expect = 7e-04
Identities = 44/185 (23%), Positives = 79/185 (42%), Gaps = 28/185 (15%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
Q+ G+ ++ Q IHRDL N+ N +KI DFGLA+ + + D T G
Sbjct: 142 QVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVH----NIDYYKKTTNGR 197
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKI-DEKADMYSLGIVFFELWHPFSTAMERQIV--LS 617
+ V + APE + ++ ++D++S G++ +E++ + V L
Sbjct: 198 LPVK---------WMAPEAL--FDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF 246
Query: 618 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
L ++G E ++R PS RP+ +L++D LD +L +
Sbjct: 247 KLLKEGHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED----------LDRVLTV 296
Query: 678 MHSSE 682
+ E
Sbjct: 297 TSTDE 301
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Many FGFR3 splice variants have been reported with the IIIb and IIIc isoforms being the predominant forms. FGFR3 IIIc is the isoform expressed in chondrocytes, the cells affected in dwarfism, while IIIb is expressed in epithelial cells. FGFR3 ligands include FGF1, FGF2, FGF4, FGF8, FGF9, and FGF23. It is a negative regulator of long bone growth. In the cochlear duct and in the lens, FGFR3 is involved in differentiation while it appears to have a role in cell proliferation in epithelial cells. Germline mutations in FGFR3 are associated with skeletal disorders including several forms of dwarfism. Some missense mutations are associated with multiple myeloma and carcinomas of the bladder and cervix. Overexpression of FGFR3 is found in thyroid carcinoma. Length = 334 |
| >gnl|CDD|173629 cd05041, PTKc_Fes_like, Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 42.4 bits (100), Expect = 7e-04
Identities = 46/206 (22%), Positives = 82/206 (39%), Gaps = 40/206 (19%)
Query: 469 LYIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
+YI ME P L + + + + + G+ ++ + IHRDL N
Sbjct: 67 IYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLV 126
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV--SVDGTGQVGTYFYTAPEIEQGWP 584
N +KI DFG+++ + GG+ DG Q+ +TAPE +
Sbjct: 127 GENNVLKISDFGMSR--------------EEEGGIYTVSDGLKQIPIK-WTAPE-ALNYG 170
Query: 585 KIDEKADMYSLGIVFFELWHPFS------TAMERQIVLSDLKQKGELP-----PSWVAKF 633
+ ++D++S GI+ LW FS M Q ++ +P P + +
Sbjct: 171 RYTSESDVWSYGIL---LWETFSLGDTPYPGMSNQQTRERIESGYRMPAPQLCPEEIYR- 226
Query: 634 SEQESLLRRLMSPSPSDRPSATELLQ 659
L+ + + P +RPS +E+
Sbjct: 227 -----LMLQCWAYDPENRPSFSEIYN 247
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes and Fer kinases play roles in haematopoiesis, inflammation and immunity, growth factor signaling, cytoskeletal regulation, cell migration and adhesion, and the regulation of cell-cell interactions. Fes and Fer show redundancy in their biological functions. Length = 251 |
| >gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Score = 41.9 bits (98), Expect = 0.001
Identities = 53/237 (22%), Positives = 98/237 (41%), Gaps = 51/237 (21%)
Query: 469 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFR----------------QIVEGLAHIHG 511
LY+ +EY + LR+ + E ++ + R Q+ G+ ++
Sbjct: 96 LYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS 155
Query: 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
Q IHRDL N+ N +KI DFGLA+ + + D T G + V
Sbjct: 156 QKCIHRDLAARNVLVTENNVMKIADFGLARDVN----NIDYYKKTTNGRLPVK------- 204
Query: 572 YFYTAPEIEQGWPKI-DEKADMYSLGIVFFELW----HPF-STAMERQIVLSDLKQKGEL 625
+ APE + ++ ++D++S G++ +E++ P+ +E L + +
Sbjct: 205 --WMAPEAL--FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDK 260
Query: 626 PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSE 682
P + +E ++R PS RP+ +L++D LD IL + + E
Sbjct: 261 PANCT---NELYMMMRDCWHAIPSHRPTFKQLVED----------LDRILTLTTNEE 304
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304 |
| >gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Query: 469 LYIQMEYC-----PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
+ + EYC LR+ ES+ + L Q+ +G+A + + IHRDL N
Sbjct: 114 ILVITEYCCYGDLLNFLRRKRESFLTLEDLL--SFSYQVAKGMAFLASKNCIHRDLAARN 171
Query: 524 IFFDARNDIKIGDFGLAK 541
+ +KI DFGLA+
Sbjct: 172 VLLTHGKIVKICDFGLAR 189
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302 |
| >gnl|CDD|133237 cd05106, PTKc_CSF-1R, Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 0.001
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 8/80 (10%)
Query: 470 YIQMEYCPRTLRQVFESYDHFDKELAW--------HLFRQIVEGLAHIHGQGIIHRDLTP 521
Y++M + Q +S D D E +W Q+ +G+ + + IHRD+
Sbjct: 181 YVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAA 240
Query: 522 NNIFFDARNDIKIGDFGLAK 541
N+ KI DFGLA+
Sbjct: 241 RNVLLTDGRVAKICDFGLAR 260
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. It leads to increases in gene transcription and protein translation, and induces cytoskeletal remodeling. CSF-1R signaling leads to a variety of cellular responses including survival, proliferation, and differentiation of target cells. It plays an important role in innate immunity, tissue development and function, and the pathogenesis of some diseases including atherosclerosis and cancer. CSF-1R signaling is also implicated in mammary gland development during pregnancy and lactation. Aberrant CSF-1/CSF-1R expression correlates with tumor cell invasiveness, poor clinical prognosis, and bone metastasis in breast cancer. Although the structure of the human CSF-1R catalytic domain is known, it is excluded from this specific alignment model because it contains a deletion in its sequence. Length = 374 |
| >gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 0.002
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 32/168 (19%)
Query: 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPT 556
+Q+ G+A++ + +HRDL N +KI DFGL++ + + ++ A P
Sbjct: 137 KQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPI 196
Query: 557 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAME----- 611
+ PE + + ++D+++ G+V LW FS M+
Sbjct: 197 R----------------WMPPE-SIFYNRYTTESDVWAYGVV---LWEIFSYGMQPYYGM 236
Query: 612 -RQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657
+ V+ ++ L P E +L+R S PSDRPS +
Sbjct: 237 AHEEVIYYVRDGNVLSCPDNCP--LELYNLMRLCWSKLPSDRPSFASI 282
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288 |
| >gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.002
Identities = 45/188 (23%), Positives = 82/188 (43%), Gaps = 34/188 (18%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+ + +D T G
Sbjct: 148 QVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLAR--DIHHIDYYKK--TTNGR 203
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKI-DEKADMYSLGIVFFELW----HPF-STAMERQI 614
+ V + APE + +I ++D++S G++ +E++ P+ +E
Sbjct: 204 LPVK---------WMAPEAL--FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF 252
Query: 615 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNI 674
L + + P + +E ++R PS RP+ +L++D LD I
Sbjct: 253 KLLKEGHRMDKPSNCT---NELYMMMRDCWHAVPSQRPTFKQLVED----------LDRI 299
Query: 675 LRMMHSSE 682
L + + E
Sbjct: 300 LALTSNQE 307
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307 |
| >gnl|CDD|133217 cd05086, PTKc_Aatyk2, Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 0.002
Identities = 40/177 (22%), Positives = 75/177 (42%), Gaps = 41/177 (23%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTD 557
+I G+ H+H +H DL N F + +K+GD+G+ E + + D P
Sbjct: 107 EIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETEDDKCVPLR 166
Query: 558 TGGVSVDGTGQVGTYFYTAPEI-----------EQGWPKIDEKADMYSLGIVFFELW--- 603
+ APE+ EQ P +++++LG+ +EL+
Sbjct: 167 ----------------WLAPELVGEFHGGLITAEQTKP-----SNVWALGVTLWELFENA 205
Query: 604 -HPFSTAMERQIVLSDLK-QKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657
P+S +R+++ +K Q+ +L P +SE+ + + SP R +A E+
Sbjct: 206 AQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCWLSPEKRATAEEV 262
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage spermatogenesis. Although it is classified as a tyr kinase based on sequence similarity and the phylogenetic tree, Aatyk2 has been characterized as a serine/threonine kinase. Length = 268 |
| >gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Score = 40.8 bits (96), Expect = 0.002
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+I +G+A++ + +HRDL N +KIGDFG+ + + + D G
Sbjct: 127 EIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDI----YETDYYRKGGKGL 182
Query: 561 VSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFEL 602
+ V + APE ++ G K+D++S G+V +E+
Sbjct: 183 LPVR---------WMAPESLKDG--VFTTKSDVWSFGVVLWEM 214
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277 |
| >gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.004
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 37/175 (21%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
+I GL H+H IH DL N A +KIGD+GL+ + +D D
Sbjct: 108 EIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHN----KYKEDYYVTPDQLW 163
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDE------------KADMYSLGIVFFELW----H 604
V + + APE+ +DE +++++SLG+ +EL+
Sbjct: 164 VPLR---------WIAPEL------VDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQ 208
Query: 605 PFSTAMERQIVLSDLK-QKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657
P+ + Q++ ++ Q+ +LP P S++ + + P RPSA E+
Sbjct: 209 PYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCWLQPEQRPSAEEV 263
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269 |
| >gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Score = 40.7 bits (95), Expect = 0.004
Identities = 44/180 (24%), Positives = 79/180 (43%), Gaps = 26/180 (14%)
Query: 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
Q+ G+ ++ + IHRDL N+ N +KI DFGLA+ + D D T G
Sbjct: 142 QVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVH----DIDYYKKTSNGR 197
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKI-DEKADMYSLGIVFFELW----HPF-STAMERQI 614
+ V + APE + ++ ++D++S GI+ +E++ P+ +E
Sbjct: 198 LPVK---------WMAPEAL--FDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELF 246
Query: 615 VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ--DALPPQMEYELLD 672
L + + P + E L+R P+ RP+ +L++ D + + E LD
Sbjct: 247 KLLREGHRMDKPSNCT---HELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEYLD 303
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314 |
| >gnl|CDD|226699 COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.004
Identities = 34/149 (22%), Positives = 54/149 (36%), Gaps = 35/149 (23%)
Query: 471 IQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
I M Y P T RQ SY H + + R + A +H G + D+ N+
Sbjct: 98 IHMIYSPATRRQ---SYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFL----- 149
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT---GQVGTYFYTAPEIEQGWPKI- 586
+ D + +D+ ++ +GT VG +T PE+ Q P
Sbjct: 150 ---VSDDSKVVLVD-----------SDSFQINANGTLHLCPVGVSEFTPPEL-QTLPSFV 194
Query: 587 ----DEKADMYSLGIVFFELW----HPFS 607
D + L ++ F L HP+S
Sbjct: 195 GFERTANHDNFGLAVLIFHLLFGGRHPYS 223
|
Length = 637 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1170 | |||
| KOG1035 | 1351 | consensus eIF-2alpha kinase GCN2 [Translation, rib | 100.0 | |
| COG0124 | 429 | HisS Histidyl-tRNA synthetase [Translation, riboso | 100.0 | |
| KOG1936 | 518 | consensus Histidyl-tRNA synthetase [Translation, r | 100.0 | |
| PLN02972 | 763 | Histidyl-tRNA synthetase | 100.0 | |
| PLN02530 | 487 | histidine-tRNA ligase | 100.0 | |
| PRK12420 | 423 | histidyl-tRNA synthetase; Provisional | 100.0 | |
| CHL00201 | 430 | syh histidine-tRNA synthetase; Provisional | 100.0 | |
| PRK12292 | 391 | hisZ ATP phosphoribosyltransferase regulatory subu | 100.0 | |
| PRK12421 | 392 | ATP phosphoribosyltransferase regulatory subunit; | 100.0 | |
| TIGR00442 | 397 | hisS histidyl-tRNA synthetase. This model finds a | 100.0 | |
| PRK00037 | 412 | hisS histidyl-tRNA synthetase; Reviewed | 100.0 | |
| TIGR00443 | 314 | hisZ_biosyn_reg ATP phosphoribosyltransferase, reg | 100.0 | |
| PRK12295 | 373 | hisZ ATP phosphoribosyltransferase regulatory subu | 100.0 | |
| PF13393 | 311 | tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI | 100.0 | |
| PRK12293 | 281 | hisZ ATP phosphoribosyltransferase regulatory subu | 100.0 | |
| KOG0615 | 475 | consensus Serine/threonine protein kinase Chk2 and | 100.0 | |
| COG3705 | 390 | HisZ ATP phosphoribosyltransferase involved in his | 100.0 | |
| KOG0581 | 364 | consensus Mitogen-activated protein kinase kinase | 100.0 | |
| KOG0575 | 592 | consensus Polo-like serine/threonine protein kinas | 100.0 | |
| KOG0598 | 357 | consensus Ribosomal protein S6 kinase and related | 100.0 | |
| cd00773 | 261 | HisRS-like_core Class II Histidinyl-tRNA synthetas | 100.0 | |
| KOG0595 | 429 | consensus Serine/threonine-protein kinase involved | 100.0 | |
| KOG0592 | 604 | consensus 3-phosphoinositide-dependent protein kin | 100.0 | |
| KOG0591 | 375 | consensus NIMA (never in mitosis)-related G2-speci | 100.0 | |
| KOG0616 | 355 | consensus cAMP-dependent protein kinase catalytic | 100.0 | |
| KOG0605 | 550 | consensus NDR and related serine/threonine kinases | 100.0 | |
| KOG0593 | 396 | consensus Predicted protein kinase KKIAMRE [Genera | 100.0 | |
| KOG0661 | 538 | consensus MAPK related serine/threonine protein ki | 100.0 | |
| KOG0600 | 560 | consensus Cdc2-related protein kinase [Cell cycle | 100.0 | |
| KOG0582 | 516 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| KOG0659 | 318 | consensus Cdk activating kinase (CAK)/RNA polymera | 100.0 | |
| KOG0597 | 808 | consensus Serine-threonine protein kinase FUSED [G | 100.0 | |
| KOG0583 | 370 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0694 | 694 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0588 | 786 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| KOG0663 | 419 | consensus Protein kinase PITSLRE and related kinas | 100.0 | |
| KOG0192 | 362 | consensus Tyrosine kinase specific for activated ( | 100.0 | |
| KOG0660 | 359 | consensus Mitogen-activated protein kinase [Signal | 100.0 | |
| TIGR00418 | 563 | thrS threonyl-tRNA synthetase. This model represen | 100.0 | |
| KOG0585 | 576 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0198 | 313 | consensus MEKK and related serine/threonine protei | 100.0 | |
| KOG0033 | 355 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| KOG0578 | 550 | consensus p21-activated serine/threonine protein k | 100.0 | |
| KOG0610 | 459 | consensus Putative serine/threonine protein kinase | 100.0 | |
| KOG0611 | 668 | consensus Predicted serine/threonine protein kinas | 100.0 | |
| PRK12294 | 272 | hisZ ATP phosphoribosyltransferase regulatory subu | 100.0 | |
| cd05612 | 291 | STKc_PRKX_like Catalytic domain of PRKX-like Prote | 100.0 | |
| PTZ00263 | 329 | protein kinase A catalytic subunit; Provisional | 100.0 | |
| cd07871 | 288 | STKc_PCTAIRE3 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0599 | 411 | consensus Phosphorylase kinase gamma subunit [Carb | 100.0 | |
| cd07869 | 303 | STKc_PFTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd07859 | 338 | STKc_TDY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| cd07848 | 287 | STKc_CDKL5 Catalytic domain of the Serine/Threonin | 100.0 | |
| KOG0589 | 426 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05571 | 323 | STKc_PKB Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG0594 | 323 | consensus Protein kinase PCTAIRE and related kinas | 100.0 | |
| PTZ00426 | 340 | cAMP-dependent protein kinase catalytic subunit; P | 100.0 | |
| KOG0201 | 467 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| PRK00413 | 638 | thrS threonyl-tRNA synthetase; Reviewed | 100.0 | |
| cd05600 | 333 | STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- | 100.0 | |
| cd05628 | 363 | STKc_NDR1 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0580 | 281 | consensus Serine/threonine protein kinase [Cell cy | 100.0 | |
| cd05626 | 381 | STKc_LATS2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05573 | 350 | STKc_ROCK_NDR_like Catalytic domain of ROCK- and N | 100.0 | |
| cd07862 | 290 | STKc_CDK6 Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0612 | 1317 | consensus Rho-associated, coiled-coil containing p | 100.0 | |
| cd05599 | 364 | STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel | 100.0 | |
| cd05631 | 285 | STKc_GRK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0032 | 382 | consensus Ca2+/calmodulin-dependent protein kinase | 100.0 | |
| cd05585 | 312 | STKc_YPK1_like Catalytic domain of Yeast Protein K | 100.0 | |
| cd05629 | 377 | STKc_NDR_like_fungal Catalytic domain of Fungal Nu | 100.0 | |
| KOG0197 | 468 | consensus Tyrosine kinases [Signal transduction me | 100.0 | |
| PTZ00036 | 440 | glycogen synthase kinase; Provisional | 100.0 | |
| cd05593 | 328 | STKc_PKB_gamma Catalytic domain of the Protein Ser | 100.0 | |
| cd05595 | 323 | STKc_PKB_beta Catalytic domain of the Protein Seri | 100.0 | |
| KOG0579 | 1187 | consensus Ste20-like serine/threonine protein kina | 100.0 | |
| cd07876 | 359 | STKc_JNK2 Catalytic domain of the Serine/Threonine | 100.0 | |
| PHA03212 | 391 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05625 | 382 | STKc_LATS1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07853 | 372 | STKc_NLK Catalytic domain of the Serine/Threonine | 100.0 | |
| KOG0658 | 364 | consensus Glycogen synthase kinase-3 [Carbohydrate | 100.0 | |
| PRK12305 | 575 | thrS threonyl-tRNA synthetase; Reviewed | 100.0 | |
| cd05598 | 376 | STKc_LATS Catalytic domain of the Protein Serine/T | 100.0 | |
| PRK12444 | 639 | threonyl-tRNA synthetase; Reviewed | 100.0 | |
| cd05601 | 330 | STKc_CRIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07863 | 288 | STKc_CDK4 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06649 | 331 | PKc_MEK2 Catalytic domain of the dual-specificity | 100.0 | |
| cd05627 | 360 | STKc_NDR2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05587 | 324 | STKc_cPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07874 | 355 | STKc_JNK3 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05590 | 320 | STKc_nPKC_eta Catalytic domain of the Protein Seri | 100.0 | |
| cd07872 | 309 | STKc_PCTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05596 | 370 | STKc_ROCK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07875 | 364 | STKc_JNK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07878 | 343 | STKc_p38beta_MAPK11 Catalytic domain of the Serine | 100.0 | |
| cd05614 | 332 | STKc_MSK2_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05616 | 323 | STKc_cPKC_beta Catalytic domain of the Protein Ser | 100.0 | |
| cd05591 | 321 | STKc_nPKC_epsilon Catalytic domain of the Protein | 100.0 | |
| cd05594 | 325 | STKc_PKB_alpha Catalytic domain of the Protein Ser | 100.0 | |
| PTZ00284 | 467 | protein kinase; Provisional | 100.0 | |
| cd05589 | 324 | STKc_PKN Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05621 | 370 | STKc_ROCK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0193 | 678 | consensus Serine/threonine protein kinase RAF [Sig | 100.0 | |
| KOG4717 | 864 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0577 | 948 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05584 | 323 | STKc_p70S6K Catalytic domain of the Protein Serine | 100.0 | |
| cd05592 | 316 | STKc_nPKC_theta_delta Catalytic domain of the Prot | 100.0 | |
| cd05597 | 331 | STKc_DMPK_like Catalytic domain of Myotonic Dystro | 100.0 | |
| cd05588 | 329 | STKc_aPKC Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05102 | 338 | PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05620 | 316 | STKc_nPKC_delta Catalytic domain of the Protein Se | 100.0 | |
| KOG0574 | 502 | consensus STE20-like serine/threonine kinase MST [ | 100.0 | |
| cd05582 | 318 | STKc_RSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd07861 | 285 | STKc_CDK1_euk Catalytic domain of the Serine/Threo | 100.0 | |
| KOG4721 | 904 | consensus Serine/threonine protein kinase, contain | 100.0 | |
| cd05570 | 318 | STKc_PKC Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05618 | 329 | STKc_aPKC_iota Catalytic domain of the Protein Ser | 100.0 | |
| cd07839 | 284 | STKc_CDK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05615 | 323 | STKc_cPKC_alpha Catalytic domain of the Protein Se | 100.0 | |
| cd07873 | 301 | STKc_PCTAIRE1 Catalytic domain of the Serine/Threo | 100.0 | |
| cd05575 | 323 | STKc_SGK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05623 | 332 | STKc_MRCK_alpha Catalytic domain of the Protein Se | 100.0 | |
| PTZ00283 | 496 | serine/threonine protein kinase; Provisional | 100.0 | |
| cd05619 | 316 | STKc_nPKC_theta Catalytic domain of the Protein Se | 100.0 | |
| cd07868 | 317 | STKc_CDK8 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05622 | 371 | STKc_ROCK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0690 | 516 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| KOG0195 | 448 | consensus Integrin-linked kinase [Signal transduct | 100.0 | |
| cd06650 | 333 | PKc_MEK1 Catalytic domain of the dual-specificity | 100.0 | |
| cd05608 | 280 | STKc_GRK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05624 | 331 | STKc_MRCK_beta Catalytic domain of the Protein Ser | 100.0 | |
| PLN00034 | 353 | mitogen-activated protein kinase kinase; Provision | 100.0 | |
| cd05605 | 285 | STKc_GRK4_like Catalytic domain of G protein-coupl | 100.0 | |
| PHA03209 | 357 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05586 | 330 | STKc_Sck1_like Catalytic domain of Suppressor of l | 100.0 | |
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd05604 | 325 | STKc_SGK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05617 | 327 | STKc_aPKC_zeta Catalytic domain of the Protein Ser | 100.0 | |
| cd06625 | 263 | STKc_MEKK3_like Catalytic domain of MAP/ERK kinase | 100.0 | |
| PF00069 | 260 | Pkinase: Protein kinase domain Protein kinase; unc | 100.0 | |
| cd05602 | 325 | STKc_SGK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05603 | 321 | STKc_SGK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08223 | 257 | STKc_Nek4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08529 | 256 | STKc_FA2-like Catalytic domain of the Protein Seri | 100.0 | |
| cd07865 | 310 | STKc_CDK9 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07845 | 309 | STKc_CDK10 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd07847 | 286 | STKc_CDKL1_4 Catalytic domain of the Serine/Threon | 100.0 | |
| cd07860 | 284 | STKc_CDK2_3 Catalytic domain of the Serine/Threoni | 100.0 | |
| PHA02988 | 283 | hypothetical protein; Provisional | 100.0 | |
| PTZ00267 | 478 | NIMA-related protein kinase; Provisional | 100.0 | |
| cd07867 | 317 | STKc_CDC2L6 Catalytic domain of Serine/Threonine K | 100.0 | |
| PHA03207 | 392 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd05607 | 277 | STKc_GRK7 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0586 | 596 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd05580 | 290 | STKc_PKA Catalytic domain of the Protein Serine/Th | 100.0 | |
| KOG4279 | 1226 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05609 | 305 | STKc_MAST Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08227 | 327 | PK_STRAD_alpha Pseudokinase domain of STE20-relate | 100.0 | |
| PHA03211 | 461 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06645 | 267 | STKc_MAP4K3 Catalytic domain of the Protein Serine | 100.0 | |
| KOG0696 | 683 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd07843 | 293 | STKc_CDC2L1 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07855 | 334 | STKc_ERK5 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06631 | 265 | STKc_YSK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06615 | 308 | PKc_MEK Catalytic domain of the dual-specificity P | 100.0 | |
| KOG0986 | 591 | consensus G protein-coupled receptor kinase [Signa | 100.0 | |
| cd06619 | 279 | PKc_MKK5 Catalytic domain of the dual-specificity | 100.0 | |
| cd06617 | 283 | PKc_MKK3_6 Catalytic domain of the dual-specificit | 100.0 | |
| KOG0667 | 586 | consensus Dual-specificity tyrosine-phosphorylatio | 100.0 | |
| cd06610 | 267 | STKc_OSR1_SPAK Catalytic domain of the Protein Ser | 100.0 | |
| cd06652 | 265 | STKc_MEKK2 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07832 | 286 | STKc_CCRK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07850 | 353 | STKc_JNK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06646 | 267 | STKc_MAP4K5 Catalytic domain of the Protein Serine | 100.0 | |
| cd05574 | 316 | STKc_phototropin_like Catalytic domain of Phototro | 100.0 | |
| cd07837 | 295 | STKc_CdkB_plant Catalytic domain of the Serine/Thr | 100.0 | |
| cd05096 | 304 | PTKc_DDR1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06651 | 266 | STKc_MEKK3 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06613 | 262 | STKc_MAP4K3_like Catalytic domain of Mitogen-activ | 100.0 | |
| cd05630 | 285 | STKc_GRK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06637 | 272 | STKc_TNIK Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05632 | 285 | STKc_GRK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06611 | 280 | STKc_SLK_like Catalytic domain of Ste20-like kinas | 100.0 | |
| cd06643 | 282 | STKc_SLK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PLN00009 | 294 | cyclin-dependent kinase A; Provisional | 100.0 | |
| cd06644 | 292 | STKc_STK10_LOK Catalytic domain of the Protein Ser | 100.0 | |
| cd07846 | 286 | STKc_CDKL2_3 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08221 | 256 | STKc_Nek9 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07844 | 291 | STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like | 100.0 | |
| cd08218 | 256 | STKc_Nek1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07835 | 283 | STKc_CDK1_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06628 | 267 | STKc_MAPKKK_Byr2_like Catalytic domain of fungal B | 100.0 | |
| cd07841 | 298 | STKc_CDK7 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd06612 | 256 | STKc_MST1_2 Catalytic domain of the Protein Serine | 100.0 | |
| KOG0584 | 632 | consensus Serine/threonine protein kinase [General | 100.0 | |
| cd07866 | 311 | STKc_BUR1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05064 | 266 | PTKc_EphR_A10 Catalytic domain of the Protein Tyro | 100.0 | |
| cd06655 | 296 | STKc_PAK2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05104 | 375 | PTKc_Kit Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08217 | 265 | STKc_Nek2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd07849 | 336 | STKc_ERK1_2_like Catalytic domain of Extracellular | 100.0 | |
| KOG0666 | 438 | consensus Cyclin C-dependent kinase CDK8 [Transcri | 100.0 | |
| cd06654 | 296 | STKc_PAK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05048 | 283 | PTKc_Ror Catalytic Domain of the Protein Tyrosine | 100.0 | |
| cd07870 | 291 | STKc_PFTAIRE2 Catalytic domain of the Serine/Threo | 100.0 | |
| KOG0596 | 677 | consensus Dual specificity; serine/threonine and t | 100.0 | |
| cd07831 | 282 | STKc_MOK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05106 | 374 | PTKc_CSF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd07836 | 284 | STKc_Pho85 Catalytic domain of the Serine/Threonin | 100.0 | |
| cd08220 | 256 | STKc_Nek8 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06609 | 274 | STKc_MST3_like Catalytic domain of Mammalian Ste20 | 100.0 | |
| cd06638 | 286 | STKc_myosinIIIA Catalytic domain of the Protein Se | 100.0 | |
| cd06608 | 275 | STKc_myosinIII_like Catalytic domain of Class III | 100.0 | |
| KOG1026 | 774 | consensus Nerve growth factor receptor TRKA and re | 100.0 | |
| cd07833 | 288 | STKc_CDKL Catalytic domain of Cyclin-Dependent pro | 100.0 | |
| cd06622 | 286 | PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS | 100.0 | |
| cd06605 | 265 | PKc_MAPKK Catalytic domain of the dual-specificity | 100.0 | |
| cd06656 | 297 | STKc_PAK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05108 | 316 | PTKc_EGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07858 | 337 | STKc_TEY_MAPK_plant Catalytic domain of the Serine | 100.0 | |
| KOG0604 | 400 | consensus MAP kinase-activated protein kinase 2 [S | 100.0 | |
| KOG4236 | 888 | consensus Serine/threonine protein kinase PKC mu/P | 100.0 | |
| cd08228 | 267 | STKc_Nek6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06626 | 264 | STKc_MEKK4 Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG0983 | 391 | consensus Mitogen-activated protein kinase (MAPK) | 100.0 | |
| cd06636 | 282 | STKc_MAP4K4_6 Catalytic domain of the Protein Seri | 100.0 | |
| cd06632 | 258 | STKc_MEKK1_plant Catalytic domain of the Protein S | 100.0 | |
| cd06639 | 291 | STKc_myosinIIIB Catalytic domain of the Protein Se | 100.0 | |
| cd08219 | 255 | STKc_Nek3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05578 | 258 | STKc_Yank1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd07834 | 330 | STKc_MAPK Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07840 | 287 | STKc_CDK9_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd06616 | 288 | PKc_MKK4 Catalytic domain of the dual-specificity | 100.0 | |
| cd07852 | 337 | STKc_MAPK15 Catalytic domain of the Serine/Threoni | 100.0 | |
| cd07842 | 316 | STKc_CDK8_like Catalytic domain of Cyclin-Dependen | 100.0 | |
| cd07877 | 345 | STKc_p38alpha_MAPK14 Catalytic domain of the Serin | 100.0 | |
| cd06630 | 268 | STKc_MEKK1 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06607 | 307 | STKc_TAO Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05116 | 257 | PTKc_Syk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07879 | 342 | STKc_p38delta_MAPK13 Catalytic domain of the Serin | 100.0 | |
| cd05114 | 256 | PTKc_Tec_Rlk Catalytic domain of the Protein Tyros | 100.0 | |
| cd06620 | 284 | PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr | 100.0 | |
| cd07864 | 302 | STKc_CDK12 Catalytic domain of the Serine/Threonin | 100.0 | |
| PHA03210 | 501 | serine/threonine kinase US3; Provisional | 100.0 | |
| cd06623 | 264 | PKc_MAPKK_plant_like Catalytic domain of Plant dua | 100.0 | |
| KOG0662 | 292 | consensus Cyclin-dependent kinase CDK5 [Intracellu | 100.0 | |
| cd06653 | 264 | STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina | 100.0 | |
| cd05054 | 337 | PTKc_VEGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06624 | 268 | STKc_ASK Catalytic domain of the Protein Serine/Th | 100.0 | |
| PRK13184 | 932 | pknD serine/threonine-protein kinase; Reviewed | 100.0 | |
| cd07857 | 332 | STKc_MPK1 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd07880 | 343 | STKc_p38gamma_MAPK12 Catalytic domain of the Serin | 100.0 | |
| cd08225 | 257 | STKc_Nek5 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05090 | 283 | PTKc_Ror1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1989 | 738 | consensus ARK protein kinase family [Signal transd | 100.0 | |
| cd06658 | 292 | STKc_PAK5 Catalytic domain of the Protein Serine/T | 100.0 | |
| KOG0607 | 463 | consensus MAP kinase-interacting kinase and relate | 100.0 | |
| cd05572 | 262 | STKc_cGK_PKG Catalytic domain of the Protein Serin | 100.0 | |
| KOG0608 | 1034 | consensus Warts/lats-like serine threonine kinases | 100.0 | |
| cd05633 | 279 | STKc_GRK3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06629 | 272 | STKc_MAPKKK_Bck1_like Catalytic domain of fungal B | 100.0 | |
| cd07851 | 343 | STKc_p38 Catalytic domain of the Serine/Threonine | 100.0 | |
| cd05062 | 277 | PTKc_IGF-1R Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05075 | 272 | PTKc_Axl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05109 | 279 | PTKc_HER2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07856 | 328 | STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre | 100.0 | |
| KOG0194 | 474 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd06659 | 297 | STKc_PAK6 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05049 | 280 | PTKc_Trk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05084 | 252 | PTKc_Fes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05052 | 263 | PTKc_Abl Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07854 | 342 | STKc_MAPK4_6 Catalytic domain of the Serine/Threon | 100.0 | |
| cd08229 | 267 | STKc_Nek7 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd06917 | 277 | STKc_NAK1_like Catalytic domain of Fungal Nak1-lik | 100.0 | |
| PF07714 | 259 | Pkinase_Tyr: Protein tyrosine kinase Protein kinas | 100.0 | |
| PRK14799 | 545 | thrS threonyl-tRNA synthetase; Provisional | 100.0 | |
| PTZ00024 | 335 | cyclin-dependent protein kinase; Provisional | 100.0 | |
| cd08226 | 328 | PK_STRAD_beta Pseudokinase domain of STE20-related | 100.0 | |
| cd05035 | 273 | PTKc_Axl_like Catalytic Domain of Axl-like Protein | 100.0 | |
| cd08224 | 267 | STKc_Nek6_Nek7 Catalytic domain of the Protein Ser | 100.0 | |
| cd07838 | 287 | STKc_CDK4_6_like Catalytic domain of Cyclin-Depend | 100.0 | |
| cd06640 | 277 | STKc_MST4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05606 | 278 | STKc_beta_ARK Catalytic domain of the Protein Seri | 100.0 | |
| cd06606 | 260 | STKc_MAPKKK Catalytic domain of the Protein Serine | 100.0 | |
| cd06648 | 285 | STKc_PAK_II Catalytic domain of the Protein Serine | 100.0 | |
| cd05105 | 400 | PTKc_PDGFR_alpha Catalytic domain of the Protein T | 100.0 | |
| cd06621 | 287 | PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek | 100.0 | |
| cd05051 | 296 | PTKc_DDR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05032 | 277 | PTKc_InsR_like Catalytic domain of Insulin Recepto | 100.0 | |
| cd05113 | 256 | PTKc_Btk_Bmx Catalytic domain of the Protein Tyros | 100.0 | |
| KOG0669 | 376 | consensus Cyclin T-dependent kinase CDK9 [Cell cyc | 100.0 | |
| cd05088 | 303 | PTKc_Tie2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05061 | 288 | PTKc_InsR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08215 | 258 | STKc_Nek Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05111 | 279 | PTK_HER3 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| cd05033 | 266 | PTKc_EphR Catalytic domain of Ephrin Receptor Prot | 100.0 | |
| cd05091 | 283 | PTKc_Ror2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05072 | 261 | PTKc_Lyn Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd06627 | 254 | STKc_Cdc7_like Catalytic domain of Cell division c | 100.0 | |
| KOG0614 | 732 | consensus cGMP-dependent protein kinase [Signal tr | 100.0 | |
| cd05080 | 283 | PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd06641 | 277 | STKc_MST3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05059 | 256 | PTKc_Tec_like Catalytic domain of Tec-like Protein | 100.0 | |
| cd06635 | 317 | STKc_TAO1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd08530 | 256 | STKc_CNK2-like Catalytic domain of the Protein Ser | 100.0 | |
| cd05053 | 293 | PTKc_FGFR Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05611 | 260 | STKc_Rim15_like Catalytic domain of fungal Rim15-l | 100.0 | |
| PHA03390 | 267 | pk1 serine/threonine-protein kinase 1; Provisional | 100.0 | |
| cd05060 | 257 | PTKc_Syk_like Catalytic domain of Spleen Tyrosine | 100.0 | |
| cd05093 | 288 | PTKc_TrkB Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05036 | 277 | PTKc_ALK_LTK Catalytic domain of the Protein Tyros | 100.0 | |
| cd05097 | 295 | PTKc_DDR_like Catalytic domain of Discoidin Domain | 100.0 | |
| cd05103 | 343 | PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd06618 | 296 | PKc_MKK7 Catalytic domain of the dual-specificity | 100.0 | |
| cd06642 | 277 | STKc_STK25-YSK1 Catalytic domain of the Protein Se | 100.0 | |
| cd05089 | 297 | PTKc_Tie1 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05577 | 277 | STKc_GRK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd05581 | 280 | STKc_PDK1 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05115 | 257 | PTKc_Zap-70 Catalytic domain of the Protein Tyrosi | 100.0 | |
| KOG4645 | 1509 | consensus MAPKKK (MAP kinase kinase kinase) SSK2 a | 100.0 | |
| cd05122 | 253 | PKc_STE Catalytic domain of STE family Protein Kin | 100.0 | |
| cd06614 | 286 | STKc_PAK Catalytic domain of the Protein Serine/Th | 100.0 | |
| cd00192 | 262 | PTKc Catalytic domain of Protein Tyrosine Kinases. | 100.0 | |
| cd07829 | 282 | STKc_CDK_like Catalytic domain of Cyclin-Dependent | 100.0 | |
| cd05079 | 284 | PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the | 100.0 | |
| cd05118 | 283 | STKc_CMGC Catalytic domain of CMGC family Serine/T | 100.0 | |
| cd06647 | 293 | STKc_PAK_I Catalytic domain of the Protein Serine/ | 100.0 | |
| cd06633 | 313 | STKc_TAO3 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05579 | 265 | STKc_MAST_like Catalytic domain of Microtubule-ass | 100.0 | |
| cd06634 | 308 | STKc_TAO2 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05068 | 261 | PTKc_Frk_like Catalytic domain of Fyn-related kina | 100.0 | |
| cd05050 | 288 | PTKc_Musk Catalytic domain of the Protein Tyrosine | 100.0 | |
| KOG1095 | 1025 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| cd05610 | 669 | STKc_MASTL Catalytic domain of the Protein Serine/ | 100.0 | |
| KOG1187 | 361 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05148 | 261 | PTKc_Srm_Brk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05066 | 267 | PTKc_EphR_A Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05055 | 302 | PTKc_PDGFR Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05082 | 256 | PTKc_Csk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd07830 | 283 | STKc_MAK_like Catalytic domain of Male germ cell-A | 100.0 | |
| KOG0695 | 593 | consensus Serine/threonine protein kinase [Signal | 100.0 | |
| cd05065 | 269 | PTKc_EphR_B Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd05070 | 260 | PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05081 | 284 | PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of | 100.0 | |
| cd05071 | 262 | PTKc_Src Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05094 | 291 | PTKc_TrkC Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05063 | 268 | PTKc_EphR_A2 Catalytic domain of the Protein Tyros | 100.0 | |
| cd05039 | 256 | PTKc_Csk_like Catalytic domain of C-terminal Src k | 100.0 | |
| cd05098 | 307 | PTKc_FGFR1 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05092 | 280 | PTKc_TrkA Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd08216 | 314 | PK_STRAD Pseudokinase domain of STE20-related kina | 100.0 | |
| cd05040 | 257 | PTKc_Ack_like Catalytic domain of the Protein Tyro | 100.0 | |
| cd05067 | 260 | PTKc_Lck_Blk Catalytic domain of the Protein Tyros | 100.0 | |
| cd05107 | 401 | PTKc_PDGFR_beta Catalytic domain of the Protein Ty | 100.0 | |
| cd05101 | 304 | PTKc_FGFR2 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd06657 | 292 | STKc_PAK4 Catalytic domain of the Protein Serine/T | 100.0 | |
| cd05095 | 296 | PTKc_DDR2 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05046 | 275 | PTK_CCK4 Pseudokinase domain of the Protein Tyrosi | 100.0 | |
| KOG4257 | 974 | consensus Focal adhesion tyrosine kinase FAK, cont | 100.0 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 100.0 | |
| cd05043 | 280 | PTK_Ryk Pseudokinase domain of Ryk (Receptor relat | 100.0 | |
| cd05078 | 258 | PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain | 100.0 | |
| KOG2345 | 302 | consensus Serine/threonine protein kinase/TGF-beta | 100.0 | |
| cd05045 | 290 | PTKc_RET Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05058 | 262 | PTKc_Met_Ron Catalytic domain of the Protein Tyros | 100.0 | |
| cd05613 | 290 | STKc_MSK1_N N-terminal catalytic domain of the Pro | 100.0 | |
| cd05069 | 260 | PTKc_Yes Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05077 | 262 | PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05056 | 270 | PTKc_FAK Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05099 | 314 | PTKc_FGFR4 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05112 | 256 | PTKc_Itk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05034 | 261 | PTKc_Src_like Catalytic domain of Src kinase-like | 100.0 | |
| cd05087 | 269 | PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein | 100.0 | |
| PHA02882 | 294 | putative serine/threonine kinase; Provisional | 100.0 | |
| cd05085 | 250 | PTKc_Fer Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05076 | 274 | PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th | 100.0 | |
| cd05110 | 303 | PTKc_HER4 Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05047 | 270 | PTKc_Tie Catalytic domain of Tie Protein Tyrosine | 100.0 | |
| cd05042 | 269 | PTKc_Aatyk Catalytic domain of the Protein Tyrosin | 100.0 | |
| smart00219 | 258 | TyrKc Tyrosine kinase, catalytic domain. Phosphotr | 100.0 | |
| cd05100 | 334 | PTKc_FGFR3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05057 | 279 | PTKc_EGFR_like Catalytic domain of Epidermal Growt | 100.0 | |
| cd05037 | 259 | PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the | 100.0 | |
| cd05041 | 251 | PTKc_Fes_like Catalytic domain of Fes-like Protein | 100.0 | |
| cd05038 | 284 | PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P | 100.0 | |
| cd05086 | 268 | PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi | 100.0 | |
| cd08222 | 260 | STKc_Nek11 Catalytic domain of the Protein Serine/ | 100.0 | |
| cd05583 | 288 | STKc_MSK_N N-terminal catalytic domain of the Prot | 100.0 | |
| cd05074 | 273 | PTKc_Tyro3 Catalytic domain of the Protein Tyrosin | 100.0 | |
| cd05123 | 250 | STKc_AGC Catalytic domain of AGC family Protein Se | 100.0 | |
| KOG0199 | 1039 | consensus ACK and related non-receptor tyrosine ki | 100.0 | |
| cd05073 | 260 | PTKc_Hck Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05083 | 254 | PTKc_Chk Catalytic domain of the Protein Tyrosine | 100.0 | |
| cd05044 | 269 | PTKc_c-ros Catalytic domain of the Protein Tyrosin | 100.0 | |
| KOG4278 | 1157 | consensus Protein tyrosine kinase [Signal transduc | 100.0 | |
| KOG0196 | 996 | consensus Tyrosine kinase, EPH (ephrin) receptor f | 100.0 | |
| KOG1006 | 361 | consensus Mitogen-activated protein kinase (MAPK) | 99.98 | |
| cd08528 | 269 | STKc_Nek10 Catalytic domain of the Protein Serine/ | 99.98 | |
| KOG0587 | 953 | consensus Traf2- and Nck-interacting kinase and re | 99.98 | |
| KOG2052 | 513 | consensus Activin A type IB receptor, serine/threo | 99.98 | |
| KOG1094 | 807 | consensus Discoidin domain receptor DDR1 [Signal t | 99.98 | |
| cd05576 | 237 | STKc_RPK118_like Catalytic domain of the Protein S | 99.97 | |
| KOG0671 | 415 | consensus LAMMER dual specificity kinases [Signal | 99.97 | |
| PRK09194 | 565 | prolyl-tRNA synthetase; Provisional | 99.97 | |
| PLN03225 | 566 | Serine/threonine-protein kinase SNT7; Provisional | 99.97 | |
| KOG0576 | 829 | consensus Mitogen-activated protein kinase kinase | 99.97 | |
| KOG1151 | 775 | consensus Tousled-like protein kinase [Signal tran | 99.97 | |
| PLN02908 | 686 | threonyl-tRNA synthetase | 99.97 | |
| KOG3653 | 534 | consensus Transforming growth factor beta/activin | 99.97 | |
| KOG0668 | 338 | consensus Casein kinase II, alpha subunit [Signal | 99.97 | |
| KOG4250 | 732 | consensus TANK binding protein kinase TBK1 [Signal | 99.97 | |
| KOG0665 | 369 | consensus Jun-N-terminal kinase (JNK) [Signal tran | 99.97 | |
| KOG0664 | 449 | consensus Nemo-like MAPK-related serine/threonine | 99.97 | |
| KOG1027 | 903 | consensus Serine/threonine protein kinase and endo | 99.97 | |
| smart00220 | 244 | S_TKc Serine/Threonine protein kinases, catalytic | 99.97 | |
| PLN03224 | 507 | probable serine/threonine protein kinase; Provisio | 99.96 | |
| KOG0200 | 609 | consensus Fibroblast/platelet-derived growth facto | 99.96 | |
| KOG1290 | 590 | consensus Serine/threonine protein kinase [Signal | 99.96 | |
| TIGR00409 | 568 | proS_fam_II prolyl-tRNA synthetase, family II. Pro | 99.96 | |
| PLN00113 | 968 | leucine-rich repeat receptor-like protein kinase; | 99.96 | |
| KOG0670 | 752 | consensus U4/U6-associated splicing factor PRP4 [R | 99.96 | |
| PRK12325 | 439 | prolyl-tRNA synthetase; Provisional | 99.96 | |
| KOG1025 | 1177 | consensus Epidermal growth factor receptor EGFR an | 99.96 | |
| KOG0984 | 282 | consensus Mitogen-activated protein kinase (MAPK) | 99.96 | |
| KOG1152 | 772 | consensus Signal transduction serine/threonine kin | 99.95 | |
| cd00180 | 215 | PKc Catalytic domain of Protein Kinases. Protein K | 99.94 | |
| PRK04173 | 456 | glycyl-tRNA synthetase; Provisional | 99.94 | |
| KOG1167 | 418 | consensus Serine/threonine protein kinase of the C | 99.94 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.94 | |
| TIGR00408 | 472 | proS_fam_I prolyl-tRNA synthetase, family I. Proly | 99.93 | |
| PRK08661 | 477 | prolyl-tRNA synthetase; Provisional | 99.93 | |
| KOG1345 | 378 | consensus Serine/threonine kinase [Signal transduc | 99.93 | |
| KOG1024 | 563 | consensus Receptor-like protein tyrosine kinase RY | 99.93 | |
| smart00221 | 225 | STYKc Protein kinase; unclassified specificity. Ph | 99.92 | |
| PLN02837 | 614 | threonine-tRNA ligase | 99.91 | |
| KOG1033 | 516 | consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati | 99.91 | |
| PRK03991 | 613 | threonyl-tRNA synthetase; Validated | 99.91 | |
| smart00750 | 176 | KIND kinase non-catalytic C-lobe domain. It is an | 99.89 | |
| PRK09188 | 365 | serine/threonine protein kinase; Provisional | 99.88 | |
| KOG1165 | 449 | consensus Casein kinase (serine/threonine/tyrosine | 99.86 | |
| COG0515 | 384 | SPS1 Serine/threonine protein kinase [General func | 99.86 | |
| COG0441 | 589 | ThrS Threonyl-tRNA synthetase [Translation, riboso | 99.86 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.86 | |
| KOG1164 | 322 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| KOG1163 | 341 | consensus Casein kinase (serine/threonine/tyrosine | 99.85 | |
| KOG0603 | 612 | consensus Ribosomal protein S6 kinase [Signal tran | 99.84 | |
| KOG1240 | 1431 | consensus Protein kinase containing WD40 repeats [ | 99.82 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.82 | |
| cd00670 | 235 | Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_t | 99.82 | |
| KOG4158 | 598 | consensus BRPK/PTEN-induced protein kinase [Signal | 99.82 | |
| cd05147 | 190 | RIO1_euk RIO kinase family; eukaryotic RIO1, catal | 99.81 | |
| cd05145 | 190 | RIO1_like RIO kinase family; RIO1, RIO3 and simila | 99.79 | |
| cd00771 | 298 | ThrRS_core Threonyl-tRNA synthetase (ThrRS) class | 99.78 | |
| PRK10359 | 232 | lipopolysaccharide core biosynthesis protein; Prov | 99.78 | |
| KOG4018 | 215 | consensus Uncharacterized conserved protein, conta | 99.77 | |
| cd00779 | 255 | ProRS_core_prok Prolyl-tRNA synthetase (ProRS) cla | 99.77 | |
| PF14531 | 288 | Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_ | 99.74 | |
| PRK10345 | 210 | hypothetical protein; Provisional | 99.73 | |
| PRK12274 | 218 | serine/threonine protein kinase; Provisional | 99.7 | |
| KOG1637 | 560 | consensus Threonyl-tRNA synthetase [Translation, r | 99.7 | |
| TIGR00389 | 551 | glyS_dimeric glycyl-tRNA synthetase, dimeric type. | 99.7 | |
| smart00090 | 237 | RIO RIO-like kinase. | 99.69 | |
| KOG1023 | 484 | consensus Natriuretic peptide receptor, guanylate | 99.67 | |
| cd00772 | 264 | ProRS_core Prolyl-tRNA synthetase (ProRS) class II | 99.66 | |
| PRK14879 | 211 | serine/threonine protein kinase; Provisional | 99.62 | |
| cd05144 | 198 | RIO2_C RIO kinase family; RIO2, C-terminal catalyt | 99.62 | |
| cd00774 | 254 | GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-lik | 99.61 | |
| PLN02734 | 684 | glycyl-tRNA synthetase | 99.59 | |
| COG0423 | 558 | GRS1 Glycyl-tRNA synthetase (class II) [Translatio | 99.59 | |
| KOG1166 | 974 | consensus Mitotic checkpoint serine/threonine prot | 99.59 | |
| TIGR03724 | 199 | arch_bud32 Kae1-associated kinase Bud32. Members o | 99.58 | |
| PRK14894 | 539 | glycyl-tRNA synthetase; Provisional | 99.58 | |
| KOG0590 | 601 | consensus Checkpoint kinase and related serine/thr | 99.57 | |
| cd05119 | 187 | RIO RIO kinase family, catalytic domain. The RIO k | 99.56 | |
| PRK09605 | 535 | bifunctional UGMP family protein/serine/threonine | 99.56 | |
| COG0442 | 500 | ProS Prolyl-tRNA synthetase [Translation, ribosoma | 99.51 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.51 | |
| PRK01723 | 239 | 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | 99.48 | |
| TIGR02367 | 453 | PylS pyrrolysyl-tRNA synthetase. PylS is the archa | 99.47 | |
| PF00587 | 173 | tRNA-synt_2b: tRNA synthetase class II core domain | 99.45 | |
| KOG2324 | 457 | consensus Prolyl-tRNA synthetase [Translation, rib | 99.43 | |
| KOG0606 | 1205 | consensus Microtubule-associated serine/threonine | 99.41 | |
| cd05120 | 155 | APH_ChoK_like Aminoglycoside 3'-phosphotransferase | 99.4 | |
| PRK04172 | 489 | pheS phenylalanyl-tRNA synthetase subunit alpha; P | 99.4 | |
| cd00778 | 261 | ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) | 99.38 | |
| PF03129 | 94 | HGTP_anticodon: Anticodon binding domain; InterPro | 99.34 | |
| KOG0601 | 524 | consensus Cyclin-dependent kinase WEE1 [Cell cycle | 99.31 | |
| cd00861 | 94 | ProRS_anticodon_short ProRS Prolyl-anticodon bindi | 99.28 | |
| cd00860 | 91 | ThrRS_anticodon ThrRS Threonyl-anticodon binding d | 99.26 | |
| cd00858 | 121 | GlyRS_anticodon GlyRS Glycyl-anticodon binding dom | 99.25 | |
| cd00862 | 202 | ProRS_anticodon_zinc ProRS Prolyl-anticodon bindin | 99.24 | |
| PRK09537 | 417 | pylS pyrolysyl-tRNA synthetase; Reviewed | 99.23 | |
| PTZ00326 | 494 | phenylalanyl-tRNA synthetase alpha chain; Provisio | 99.2 | |
| TIGR01982 | 437 | UbiB 2-polyprenylphenol 6-hydroxylase. This model | 99.17 | |
| cd00738 | 94 | HGTP_anticodon HGTP anticodon binding domain, as f | 99.15 | |
| cd00768 | 211 | class_II_aaRS-like_core Class II tRNA amino-acyl s | 99.14 | |
| KOG1266 | 458 | consensus Protein kinase [Signal transduction mech | 99.12 | |
| KOG1243 | 690 | consensus Protein kinase [General function predict | 99.11 | |
| PRK04750 | 537 | ubiB putative ubiquinone biosynthesis protein UbiB | 99.11 | |
| cd05151 | 170 | ChoK Choline Kinase (ChoK). The ChoK subfamily is | 99.1 |
| >KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-89 Score=831.69 Aligned_cols=777 Identities=47% Similarity=0.721 Sum_probs=571.9
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+||+++|++++.||+||||.||+|+++.+|+.||||+|+.+. +.....++.+|++.|++|+|||||+||.+|.+....
T Consensus 474 ~SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~-s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~ 552 (1351)
T KOG1035|consen 474 FSRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA-SDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAE 552 (1351)
T ss_pred hhhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch-HHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCc
Confidence 3799999999999999999999999999999999999999886 666778899999999999999999999999986531
Q ss_pred ccC------------CC-------CC-------------------CCCCcccccc---ccc-------------c---cc
Q 001059 430 DFD------------GD-------SM-------------------WGSGTLASST---FSN-------------R---AA 452 (1170)
Q Consensus 430 ~~~------------~~-------~~-------------------~~~g~~~~~~---~~~-------------~---~~ 452 (1170)
.-. +. .+ |+..+..+.+ +.+ . +.
T Consensus 553 ~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~ 632 (1351)
T KOG1035|consen 553 LTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSN 632 (1351)
T ss_pred cccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccc
Confidence 000 00 00 0000000000 000 0 00
Q ss_pred ---------------ccccccccccccc-------ccEEEEEeeccCCcHHHHHHhcCCC--CHHHHHHHHHHHHHHHHH
Q 001059 453 ---------------SSADVTGQENKLE-------STYLYIQMEYCPRTLRQVFESYDHF--DKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 453 ---------------~~~~~~~~~~~~~-------~~~l~iVmEy~~gsL~~~l~~~~~l--~e~~~~~i~~qI~~gL~y 508 (1170)
++..+...++..+ ..++||.||||+.++.+.+..++.+ ....+|++++||++||+|
T Consensus 633 tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaY 712 (1351)
T KOG1035|consen 633 TSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAY 712 (1351)
T ss_pred ccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHH
Confidence 0000111122222 2789999999998777776666655 488899999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccc--cccccCCCCC-CCCCCccccCcccccCccCCCcccccCCC-
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL--EQLDQDAAFP-TDTGGVSVDGTGQVGTYFYTAPEIEQGWP- 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~GT~~Y~APE~l~~~~- 584 (1170)
+|++|||||||||.|||+++++.|||+|||+|+.... ....+...+. ...++...+.|+.+||..|+|||++.+..
T Consensus 713 IH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~ 792 (1351)
T KOG1035|consen 713 IHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSS 792 (1351)
T ss_pred HHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhccccc
Confidence 9999999999999999999999999999999997431 1111111111 12233344678999999999999998866
Q ss_pred -CCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCc---cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 -KIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 -~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~---~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.|+.|+|||||||||+||++||.+.|++...+..++ ++.+|.. +.+..+...++|++||+.||++||||.|+|++
T Consensus 793 ~~Yn~KiDmYSLGIVlFEM~yPF~TsMERa~iL~~LR-~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s 871 (1351)
T KOG1035|consen 793 NKYNSKIDMYSLGIVLFEMLYPFGTSMERASILTNLR-KGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNS 871 (1351)
T ss_pred ccccchhhhHHHHHHHHHHhccCCchHHHHHHHHhcc-cCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhc
Confidence 699999999999999999999999999999999988 8888877 77777888999999999999999999999999
Q ss_pred cCCCCchHHHHHHHHHhcCCCCCccchhhhhcccccchhhhhhhcccccccCCCCCccccccchhhhhhhhHHhHHHHHH
Q 001059 661 ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMF 740 (1170)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f 740 (1170)
.|++....++. ..........+...+.......+.++......+. ...... -.+++.+....+++++.+.+.++|
T Consensus 872 ~llppe~~el~-~~~~h~~~~~~~k~~~~~~~~~~~q~~~~~~n~~--yd~~~~--~~~~~~~~~~~l~~~v~e~~~~if 946 (1351)
T KOG1035|consen 872 ELLPPEESELL-VFLQHLYIEQLGKAYKNLLQLIFEQEVLEVLNHQ--YDLDRL--SYIQYTEINNELREYVVEEVVKIF 946 (1351)
T ss_pred cCCCccchHHH-HHHHHHHHHHHHHHHhchhhHHHHHhhhhhhccc--cccccc--cccccchhHHHHHHHHHHHHHHHH
Confidence 99985433332 2222222222333444444444554444333322 121111 346777888999999999999999
Q ss_pred HHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEEecCeEEcCCCCCCCCce
Q 001059 741 RQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRY 820 (1170)
Q Consensus 741 ~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~~~~ef 820 (1170)
++||+.++.||++.+.........+.+.+.|++|-.+.|-.|++.|+||+++.|...-+|+|.++.|||.+... .++++
T Consensus 947 r~Hga~~l~tpp~~~~~~~~~~~~~~v~~ld~sG~~v~Lp~DLr~pfar~vs~N~~~~~Kry~i~rVyr~~~~~-hP~~~ 1025 (1351)
T KOG1035|consen 947 RKHGAIELETPPLSLRNACAYFSRKAVELLDHSGDVVELPYDLRLPFARYVSRNSVLSFKRYCISRVYRPAIHN-HPKEC 1025 (1351)
T ss_pred HHhcceeccCCccccccccchhccceeeeecCCCCEEEeeccccchHHHHhhhchHHHHHHhhhheeecccccC-CCccc
Confidence 99999999999986665555667889999999999999999999999999999888899999999999987755 88899
Q ss_pred eEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccc
Q 001059 821 LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEW 900 (1170)
Q Consensus 821 ~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~ 900 (1170)
+||+++|||...-..|||+|.++.+++...--..++.|+|||..++++++.-+|++++++..+..++...-..+.
T Consensus 1026 ~ec~fDii~~t~sl~~AE~L~vi~Ei~~~~l~~~n~~i~lnH~~LL~Ai~~~~~i~~~~r~~v~~~l~~~~~~r~----- 1100 (1351)
T KOG1035|consen 1026 LECDFDIIGPTTSLTEAELLKVIVEITTEILHEGNCDIHLNHADLLEAILSHCGIPKDQRRKVAELLSDMGSSRP----- 1100 (1351)
T ss_pred cceeeeEecCCCCccHHHHHHHHHHHHHHHhccCceeEEeChHHHHHHHHHHcCCCHHHHHHHHHHHHHHhhccc-----
Confidence 999999999887799999999999999885333469999999999999999999999999998877766432221
Q ss_pred cchHHHHHHHHHHHcCCcHHHHHHHHHHH----HHhcCChhhHHHHHhccCCCChhHHHHHHHH-----HHHHccCcceE
Q 001059 901 KSKWVVIRRQLLQELNLAEAVVNRLQTVG----LRFCGAADQALPRLRGALPADKPTRKALDEL-----YLRIWRIEKNI 971 (1170)
Q Consensus 901 ~~~~~~~~~~~~~~~~l~~~~~~~l~~l~----~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i 971 (1170)
..++. +...-...........+..++ ....|. ...+..++..+.....++ +|++| ++..+|+...+
T Consensus 1101 --~~~~~-~~~~~~~~~~s~~~~~l~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~vr-~L~eLe~~~~~~~~~~i~~~~ 1175 (1351)
T KOG1035|consen 1101 --QRSEK-ELKWVFIRRSSLQLAKLPEFVLNRLFLVAGR-FQALKLIRGKLRADSLVR-ALKELENVVGLLRSLGIEEHV 1175 (1351)
T ss_pred --cHHHH-HHHHhhhhHHHHHhhhhHHHHHhhhhhhhcc-hhhhHHHhhhhhhhHHHH-HHHHHHHHHHHHHHhccccce
Confidence 11111 111000111111111111111 112233 245555555444444455 88888 88889999889
Q ss_pred EEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhh
Q 001059 972 YIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQH 1051 (1170)
Q Consensus 972 ~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~ 1051 (1170)
.|+.++.+....-.|++|.+.+.... .+.+....++.|||||.++.+|++.. .++ -.+|+|... +.-+...
T Consensus 1176 ~i~~g~~~~~~~~~g~~~qi~a~~~~--~~~~~~~~la~GgRyd~~~~~~~~~~---~~~---~p~a~gv~~-~~~~~~~ 1246 (1351)
T KOG1035|consen 1176 HIYVGPTESRHRNGGIQFQITAEIKS--NTSGDPVLLAAGGRYDSLLQEVRDEQ---KMN---LPGAIGVSA-LSTIRQH 1246 (1351)
T ss_pred EEeeccceeEEcCCcEEEEEeecccC--CCcCCceeeecccchHHHHHHhhhhh---hhc---Ccccceehh-hHHHHHh
Confidence 99999777766678899999876543 34455567999999999999998742 122 235777652 2222222
Q ss_pred ccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCC
Q 001059 1052 YPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKG 1131 (1170)
Q Consensus 1052 L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~ 1131 (1170)
+..+.........++|+||..+ ...+..++.++++||..||++++.+.+...+..+-+||+..-|.+++++. ++
T Consensus 1247 ~~~~~~~~~~~~~cdvlics~g-~~l~t~~~~l~~~LWs~gI~a~i~~~~s~~~~e~~e~~~~~~i~~iliv~-----n~ 1320 (1351)
T KOG1035|consen 1247 APKDLEPIKTPSSCDVLICSRG-SGLLTQRMELVAKLWSKGIKAEIVPDPSPSLEELTEYANEHEITCILIVT-----NQ 1320 (1351)
T ss_pred hhccccCCCCcccccEEEEecC-CchHHHHHHHHHHHHHcCcccceeeCCCcchHHHHHHHhcCceEEEEEEe-----cc
Confidence 2223333445568899999997 77899999999999999999999999888899999999988888888875 56
Q ss_pred eEEEEEcC--CCcccccchHHHHHHHHHHH
Q 001059 1132 LVKVRHLD--VKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1132 ~v~vk~l~--~~eq~~v~~~~l~~~l~~~l 1159 (1170)
...||... ...+..+-..+|++++.+.+
T Consensus 1321 ~~~vks~~~e~~se~~~~~~elv~f~~~~~ 1350 (1351)
T KOG1035|consen 1321 KEKVKSFELERKSEKVVGRTELVEFLLQAL 1350 (1351)
T ss_pred eeeechhHHhhhhhhhhhHHHHHHHHHHhh
Confidence 66776654 34455566788999887654
|
|
| >COG0124 HisS Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-75 Score=673.11 Aligned_cols=407 Identities=21% Similarity=0.293 Sum_probs=348.1
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Ccc---cccceEEEeccCCceeeecCCCCH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
.|+|++|++|.++..+++|+++++++|++|||.+|.||+| .+..+ |+. ..++||.|.|++|+.++||||+|+
T Consensus 6 ~prG~~D~lp~d~~~~~~i~~~~~~v~~~yGf~eI~TPifE~telf~r~~Ge~td~v~kemY~F~Dkggr~laLRpe~Ta 85 (429)
T COG0124 6 RPRGTRDFLPEDMALREYIESTIRKVFESYGFSEIRTPIFEYTELFARKSGEETDVVEKEMYTFKDKGGRSLALRPELTA 85 (429)
T ss_pred CCCCccccChHHHHHHHHHHHHHHHHHHHcCCEeccCccccchhHhhhccCCcccccccceEEEEeCCCCEEEecccCcH
Confidence 4999999999999999999999999999999999999999 44433 655 679999999999999999999999
Q ss_pred HHHHHHHhCCC---CceeEEEecCeEEcCCCCCCCCc-eeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeC
Q 001059 786 PFIRWAISNQK---SSFKRYEISSVYRRAIGHSPPNR-YLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN 861 (1170)
Q Consensus 786 ~iaR~~~~~~~---~P~r~~Y~g~VfR~e~~~~~~~e-f~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg 861 (1170)
|+||++++|.. .|+|+||+|+|||||+||.||.| |+|+|+|+||.+++.+|||||+|+.++|++||+.+ ++|+||
T Consensus 86 pv~R~~~en~~~~~~p~k~yy~g~vfRyErPQ~GR~RqF~Q~g~E~iG~~~~~~DAEvi~l~~~~l~~lGi~~-~~l~iN 164 (429)
T COG0124 86 PVARAVAENKLDLPKPLKLYYFGPVFRYERPQKGRYRQFYQFGVEVIGSDSPDADAEVIALAVEILEALGIGG-FTLEIN 164 (429)
T ss_pred HHHHHHHhccccccCCeeEEEecceecCCCCCCCCceeeEEcCeEEeCCCCcccCHHHHHHHHHHHHHcCCCc-EEEEEc
Confidence 99999998753 59999999999999999987765 99999999999999999999999999999999997 999999
Q ss_pred cHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHH
Q 001059 862 HGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALP 941 (1170)
Q Consensus 862 ~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~ 941 (1170)
|+++++++++.+|+ +.+..+.+++++++++ + +..+.+........+.+..|- ...+...++++
T Consensus 165 ~~g~l~~~~~~~gi--~~~~~l~~~ldk~~k~-------------~-~~~L~e~~~~r~~~n~lr~ld-~k~~~~~~~~~ 227 (429)
T COG0124 165 SRGILEGRLEYLGI--DQREALLRYLDKLDKI-------------G-KLELDEDSKRRLKTNPLRVLD-SKKDSDQELLK 227 (429)
T ss_pred CcccHHHHHHhhcc--hhHHHHHHHHhhhhhH-------------H-HHHhhhhhhhhhhhchHHHHH-hccchHHHHHh
Confidence 99999999999999 7788999999988742 1 122222222333455555554 23344455555
Q ss_pred HHhccCCC-ChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhh
Q 001059 942 RLRGALPA-DKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLL 1018 (1170)
Q Consensus 942 ~l~~~~~~-~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~ 1018 (1170)
.+..++.. .....+.++++ +|+++|+ .+.+|+++|||||||||+|||++..+.+ .+++||||||||+|+
T Consensus 228 ~ap~i~~~~~~e~~~~~~~v~~~L~~~g~--~~~id~~lvRGLDYYtg~VFE~~~~~~~------~~~sI~gGGRYD~Lv 299 (429)
T COG0124 228 NAPELLDYLDEESLEHLEELLALLDALGI--SYEIDPSLVRGLDYYTGTVFEAVTDGLG------AQGSVCGGGRYDGLV 299 (429)
T ss_pred ccHHhhhhccHHHHHHHHHHHHHHHHcCC--CEEEccceecchhhccceEEEEEEcCCc------cccceecCccchHHH
Confidence 55555542 33566777777 9999995 4999999999999999999999987643 367899999999999
Q ss_pred hhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEe
Q 001059 1019 HRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFV 1098 (1170)
Q Consensus 1019 ~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~ 1098 (1170)
+.||++ ++||||||+|+|||+.+|...........+++|+|++.+ +....+|+++|++||+.|++|+++
T Consensus 300 ~~~gG~----------~~pavGFaiGveRl~~~l~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~la~~LR~~g~~~~~~ 368 (429)
T COG0124 300 EEFGGK----------PTPAVGFAIGVERLILALEEEGKEDPVETRVDVYVVPLG-EDAEPEALKLAQKLRAAGISVEVD 368 (429)
T ss_pred HHhCCC----------CCCceeEehHHHHHHHHHHHcCCCCCcCCCCCEEEEEcC-chhHHHHHHHHHHHHHcCCcEEEE
Confidence 999875 579999999999999998744333334678899999997 555789999999999999999998
Q ss_pred eCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 001059 1099 PVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1099 ~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~ 1158 (1170)
+. .+++++|++||++.|++++||+|++|+++|+|+||||.+|+|..++++++++.+...
T Consensus 369 ~~-~r~~k~q~k~A~~~g~~~~viiGe~E~~~g~v~vKdl~t~eq~~v~~~~~~~~~~~~ 427 (429)
T COG0124 369 YS-GRKLKKQFKYADKLGARFAVILGEDELANGVVTVKDLATGEQEEVPLDELVEELKEL 427 (429)
T ss_pred ec-cccHHHHHHHHHHCCCCEEEEEcchHHhcCCEEEeeCCCCccceecHHHHHHHHHhh
Confidence 87 678999999999999999999999999999999999999999999999999988764
|
|
| >KOG1936 consensus Histidyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-74 Score=627.95 Aligned_cols=427 Identities=27% Similarity=0.457 Sum_probs=383.2
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHH
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
-+.|+|++||.|.++.++++|.+.+.++|++||+..|+||+| ++.++ |++ .+.+|.|.|++|+.++||||+|+|
T Consensus 60 lKtPKGTrD~~p~qm~lRe~if~~i~~vFkrhGa~~iDTPVFElkeiL~gKYGEd-skLiYdlkDQGGEl~SLRYDLTVP 138 (518)
T KOG1936|consen 60 LKTPKGTRDFSPEQMALREKIFSTIKEVFKRHGAETIDTPVFELKEILTGKYGED-SKLIYDLKDQGGELCSLRYDLTVP 138 (518)
T ss_pred ecCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeccccchhHHHHHhhhcccc-cceeEehhhcCCcEEEeecccccH
Confidence 367999999999999999999999999999999999999999 77788 555 499999999999999999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeEEcCCC---CCCCCceeEeEEEEeCCCCc-ccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 787 FIRWAISNQKSSFKRYEISSVYRRAIG---HSPPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 787 iaR~~~~~~~~P~r~~Y~g~VfR~e~~---~~~~~ef~Q~GvEiiG~~~~-~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
+||++++|+-..+++|+++.|||+++| ++|+|||+||+++|.|.-++ .+|+|++.++.++|+.|||.+ |.|++||
T Consensus 139 fARylAmNki~sikRy~iAkVyRRd~P~mtrGR~REFYQcDFDIAG~~d~M~pdaE~lkiv~e~L~~l~Igd-~~iKvNh 217 (518)
T KOG1936|consen 139 FARYLAMNKITSIKRYHIAKVYRRDQPAMTRGRYREFYQCDFDIAGQFDPMIPDAECLKIVVEILSRLGIGD-YGIKVNH 217 (518)
T ss_pred HHHHHHHcccccceeeeEEEEEeccCchhhchhhhhhhccCccccccCCCCCchHHHHHHHHHHHhhcCccc-eEEEecH
Confidence 999999998889999999999999887 46667899999999996554 899999999999999999985 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|+|++..+.++..+|++| |.+|+++++|+..++|++++.++.+.+++ .+.|. .+.+++
T Consensus 218 RkiLdgmf~v~GVp~~~frtICSsIDKLd---------K~pwedVkkEmv~eKGlsee~ad~igeyv-~~~g~-~eL~e~ 286 (518)
T KOG1936|consen 218 RKILDGMFAVCGVPEDKFRTICSSIDKLD---------KMPWEDVKKEMVFEKGLSEEAADRIGEYV-SLKGL-DELLEK 286 (518)
T ss_pred HHHHHHHHHHhCCCHHHhhhHHHhhhhhh---------cCCHHHHHHHHHHhcCCCHHHHHHHHHHh-hhccH-HHHHHH
Confidence 99999999999999999999999999988 78999999999999999999999999999 56665 666677
Q ss_pred Hhc--cCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccC--CCcc---------cccc
Q 001059 943 LRG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE--KYPA---------TLVE 1004 (1170)
Q Consensus 943 l~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~--~~~~---------~~~~ 1004 (1170)
+.. .+..|+...+++++| +++.+|+.++|.||+|++||||||||+|||++..+. -.|. ..+.
T Consensus 287 l~~d~~l~~n~~a~eal~dlk~Lf~y~~~fg~s~~isfDlSLARGLDYYTGvIyEav~~~~~~~~~a~~~~~~~~~e~~~ 366 (518)
T KOG1936|consen 287 LIADPKLSQNEAAKEALADLKQLFEYLEIFGISERISFDLSLARGLDYYTGVIYEAVLRGLRLICPAGRYDQAGSTEPGG 366 (518)
T ss_pred HhcCCcccccHHHHHHHHHHHHHHHHHHHcCCcceEEeehHHhccchhhhceeeeeeeccccccCcchhhhccccccCCC
Confidence 664 466788899999998 899999999999999999999999999999998651 1111 1234
Q ss_pred cceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCC---CCCCCCCceEEEEEcCCCccHHHH
Q 001059 1005 GTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK---PVRNEAGTSVLVCSRGGGGLLVER 1081 (1170)
Q Consensus 1005 ~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~---~~~~~~~~~vlv~~~~~~~~~~~a 1081 (1170)
.++||+|||||+|+++|+.. +..+|+||+++|++||+.+|++... .......++|+|.... ...+.++
T Consensus 367 vGSvaaGGRYDnLv~mf~~k--------~~~vPcvG~S~GVeRiFsile~r~~~~~~~iR~t~t~V~V~~~~-k~~l~eR 437 (518)
T KOG1936|consen 367 VGSVAAGGRYDNLVGMFDKK--------GDKVPCVGQSVGVERIFSILEQRAATVATKIRTTETQVYVAAAG-KNLLFER 437 (518)
T ss_pred ccccccCcchhhHHHHhccc--------cCcCCccceeehHhHHHHHHHHHHHhhhhccccCceEEEEEecC-CchHHHH
Confidence 46899999999999999643 3468999999999999999973321 2234667889998886 7789999
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1082 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1082 ~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
+++.+.||..||.++..+..++++.+|+.||++.|||++|++|++|+++|.|+||++.+++...++.++++..|++.++
T Consensus 438 ~k~v~~Lw~agI~aE~~yk~~~~~~~q~~~~e~~~ip~~vi~Ge~El~~G~V~vk~~~~re~~~v~~e~~v~~l~~~l~ 516 (518)
T KOG1936|consen 438 LKVVNALWDAGIKAEYLYKANPKLLKQFQYAEEAGIPLAVILGEEELADGSVKVKNVGTREEVLVKREQFVSELKDLLS 516 (518)
T ss_pred HHHHHHHHhcCcchhhhhhcCccHHHHHHHHHhcCCCeEEEechhhhcCCeEEEEecccccceeccHHHHHHHHHHHhc
Confidence 9999999999999999998889999999999999999999999999999999999999999999999999999998875
|
|
| >PLN02972 Histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-71 Score=672.58 Aligned_cols=418 Identities=25% Similarity=0.404 Sum_probs=366.9
Q ss_pred cCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCH
Q 001059 711 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 711 ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
+-+.|+|++|++|.++..+++|++.++++|++|||.+|+||+| .+.++ +++ .++||+|.|++|+.++||||+|+
T Consensus 326 ~~k~PkGtrD~lP~e~~~re~I~~~L~~vFk~hGy~eI~TPvfE~~Ell~~k~Ged-~k~mY~f~D~gGr~LaLRPDlTv 404 (763)
T PLN02972 326 LPKIPKGTRDFAKEQMAIREKAFSIITSVFKRHGATALDTPVFELRETLMGKYGED-SKLIYDLADQGGELCSLRYDLTV 404 (763)
T ss_pred ccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCEEccCCcccchHHhhcccCcc-hhheEEEECCCCCEEEeCCCChH
Confidence 3388999999999999999999999999999999999999999 34444 444 57899999999999999999999
Q ss_pred HHHHHHHhCCCCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCC-CcccHHHHHHHHHHHHHHcCCCcceEEEeCcH
Q 001059 786 PFIRWAISNQKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 863 (1170)
Q Consensus 786 ~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~-~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~ 863 (1170)
|+||++++|...|+|+||+|+|||+++|+.++ |||+|+|+||||.. +..+|+|||.++.++|+.||+.+ ++|+|||+
T Consensus 405 PiAR~vA~n~~~p~KrYyiG~VFR~e~pqkGR~REF~Q~G~EIIG~~~~~~aDAEVI~La~E~L~~LGi~d-f~I~INh~ 483 (763)
T PLN02972 405 PFARYVAMNGITSFKRYQIAKVYRRDNPSKGRYREFYQCDFDIAGVYEPMGPDFEIIKVLTELLDELDIGT-YEVKLNHR 483 (763)
T ss_pred HHHHHHHhCCCCcceEEEeccEEecCCCCCCCCccceEEeEEEEcCCCcchhhHHHHHHHHHHHHhCCCCc-eEEEeCCH
Confidence 99999999877799999999999999988665 46999999999985 45789999999999999999985 99999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 001059 864 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 943 (1170)
Q Consensus 864 ~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 943 (1170)
++++++++.+|++++.++.++.++++++ +.++++++++++...+++++.++.|..++ .+.|++.++++.+
T Consensus 484 ~iL~~ILe~lgi~~e~~~~v~~aIdkld---------k~~le~vk~eL~~~~gLs~e~~~~L~~L~-~L~G~~~evLd~L 553 (763)
T PLN02972 484 KLLDGMLEICGVPPEKFRTICSSIDKLD---------KQSFEQVKKEMVEEKGLSNETADKIGNFV-KERGPPLELLSKL 553 (763)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHhh---------hhhHHHHHHHHhhhcCCCHHHHHHHHHHH-HhcCCHHHHHHHH
Confidence 9999999999999999899989999887 56778888888888899999999999998 6888878888888
Q ss_pred hcc---CCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccc
Q 001059 944 RGA---LPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1015 (1170)
Q Consensus 944 ~~~---~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD 1015 (1170)
+.. +..++...+++++| ++..+|+.+++.||++++||++||||+|||+|..+.+ .++||+|||||
T Consensus 554 ~~~~~~l~~~~~~~~aL~eL~~L~~~L~~~gv~~~I~fDlsLvRGLDYYTGiVFE~~~~g~~-------~gsIagGGRYD 626 (763)
T PLN02972 554 RQEGSEFLGNASSRAALDELEIMFKALEKSKAIGKIVFDLSLARGLDYYTGVIYEAVFKGAQ-------VGSIAAGGRYD 626 (763)
T ss_pred HHhhHhhccChHHHHHHHHHHHHHHHHHhcCCCccEEECCcccCCCcccCceEEEEEEcCCc-------cceeeecCCch
Confidence 753 34566677788887 7788898888999999999999999999999986522 14799999999
Q ss_pred hhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCC-C--CCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcC
Q 001059 1016 YLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFK-P--VRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1092 (1170)
Q Consensus 1016 ~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~-~--~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~G 1092 (1170)
+|+++||++ ++||||||||+|||+.+|.+... . .....+++|+|++.+ ++.+.+++++++.||+.|
T Consensus 627 ~Lv~~FgG~----------~vPAVGFSiGIERL~~~L~~~~~~~~~~~~~~~~dVlV~s~g-~~~l~~alkia~~LR~aG 695 (763)
T PLN02972 627 NLVGMFSGK----------QVPAVGVSLGIERVFAIMEQQEEEKSQVIRPTETEVLVSIIG-DDKLALAAELVSELWNAG 695 (763)
T ss_pred hHHHhcCCC----------CCCEEEEEecHHHHHHHHHHcccCCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHHCC
Confidence 999999653 47999999999999988863221 1 112345789999985 667889999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1093 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1093 i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
|+|++.. .++++++++||++.||+++||+|++|+++|+|+||||.+++|..|++++++++|++.|.
T Consensus 696 I~aE~~~--~~kl~kq~~~A~k~gi~~vVIIGe~E~~~g~VkVKnL~tgeq~~V~~delv~~l~~~l~ 761 (763)
T PLN02972 696 IKAEYKV--STRKAKHLKRAKESGIPWMVLVGEKELSKGFVKLKNLEAGVEEEVDRTCFVQELKAELL 761 (763)
T ss_pred CEEEEeC--CCCHHHHHHHHHHCCCCEEEEECchHHhCCeEEEEECCCCcceEeeHHHHHHHHHHHhc
Confidence 9999644 46899999999999999999999999999999999999999999999999999988775
|
|
| >PLN02530 histidine-tRNA ligase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-67 Score=632.61 Aligned_cols=404 Identities=18% Similarity=0.227 Sum_probs=344.7
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
..|+|++|++|.++.++++|++.++++|++|||++|.||+| .+..+ |+...++||+|.|++|+.++||||+|+|+
T Consensus 71 ~~p~G~~D~lp~~~~~~~~i~~~~~~~~~~~Gy~~I~tP~lE~~el~~~~~g~~~~~~~y~f~D~~g~~l~LRpD~T~~i 150 (487)
T PLN02530 71 NPPKGTRDFPPEDMRLRNWLFDHFREVSRLFGFEEVDAPVLESEELYIRKAGEEITDQLYNFEDKGGRRVALRPELTPSL 150 (487)
T ss_pred CCCCCcCcCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHhccccCcccccceEEEECCCCCEEecCCCCcHHH
Confidence 56999999999999999999999999999999999999999 44444 77788999999999999999999999999
Q ss_pred HHHHHhCC---CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCc-ceEEEeCc
Q 001059 788 IRWAISNQ---KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAE-SCDIHLNH 862 (1170)
Q Consensus 788 aR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~-~~~i~lg~ 862 (1170)
||+++++. ..|+|+||+|+|||+++++.++ |||+|+|+|+||.+++.+|+|+|+++.++|+.||+++ +++|+|||
T Consensus 151 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~q~gr~REf~Q~giEiiG~~~~~aDaEvi~l~~~~l~~lgl~~~~~~i~i~~ 230 (487)
T PLN02530 151 ARLVLQKGKSLSLPLKWFAIGQCWRYERMTRGRRREHYQWNMDIIGVPGVEAEAELLAAIVTFFKRVGITSSDVGIKVSS 230 (487)
T ss_pred HHHHHhcccccCCCeEEEEEcCEEcCcCCCCCCccceEEcCeeEeCCCCcchhHHHHHHHHHHHHHcCCCCCceEEEEcC
Confidence 99999864 3599999999999999988765 5799999999999999999999999999999999962 49999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.++++++.+..++.+++++++ .+.+++++. +...+++.+.++.+..++. +. .+++
T Consensus 231 ~~i~~~~l~~~~~~~~~~~~v~~~~d~l~k---------~~~~~l~~~-L~~~~~~~~~~~~l~~l~~-~~-----~~~~ 294 (487)
T PLN02530 231 RKVLQAVLKSYGIPEESFAPVCVIVDKLEK---------LPREEIEKE-LDTLGVSEEAIEGILDVLS-LK-----SLDD 294 (487)
T ss_pred HHHHHHHHHHcCCchhhHHHHHHHHHhhhh---------ccHHHHHHH-HHHcCCCHHHHHHHHHHHh-cc-----CHHH
Confidence 999999999999999888888888888773 445566554 5668888888888877773 22 3445
Q ss_pred HhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhh
Q 001059 943 LRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1020 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~ 1020 (1170)
+...+.......+.|+++ +++.+|+.+++.||++++||++||||+|||+|... +.+++||+|||||+|++.
T Consensus 295 l~~~~~~~~~~l~~L~~l~~~l~~~g~~~~i~~Dl~lvrgldYYTGivFe~~~~~-------~~~~~I~gGGRYD~Li~~ 367 (487)
T PLN02530 295 LEALLGADSEAVADLKQLFSLAEAYGYQDWLVFDASVVRGLAYYTGIVFEGFDRA-------GKLRAICGGGRYDRLLST 367 (487)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHcCCCccEEEecccccCccccCceEEEEEecC-------CCcceeeecccHHHHHHH
Confidence 555443222344555555 88899998889999999999999999999999742 123479999999999999
Q ss_pred cccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC
Q 001059 1021 MWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV 1100 (1170)
Q Consensus 1021 fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~ 1100 (1170)
||+. ++||||||+|++||+.++++....+....+.+++|++.+ ++...+|+++|++||+.|++|+++..
T Consensus 368 fgg~----------~~pAvGFa~g~~~l~~~l~~~g~~p~~~~~~dVlVi~~~-~~~~~~A~~ia~~LR~~Gi~vevd~~ 436 (487)
T PLN02530 368 FGGE----------DTPACGFGFGDAVIVELLKEKGLLPELPHQVDDVVFALD-EDLQGAAAGVASRLREKGRSVDLVLE 436 (487)
T ss_pred hCCC----------CCCeeEEEEhHHHHHHHHHhcCCCCCCCCCCcEEEEEcC-hHHHHHHHHHHHHHHHCCCeEEEecC
Confidence 9754 469999999999999887643222222356789999985 66788999999999999999998877
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 001059 1101 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1151 (1170)
Q Consensus 1101 ~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l 1151 (1170)
+++++++++||++.|+++++++|++|.++|+|+||||.+++|..|+++++
T Consensus 437 -~~~l~k~ik~A~k~g~~~iviiG~~E~~~~~V~vK~l~sgeq~~v~~~el 486 (487)
T PLN02530 437 -PKKLKWVFKHAERIGAKRLVLVGASEWERGMVRVKDLSSGEQTEVKLDEL 486 (487)
T ss_pred -CCCHHHHHHHHHHCCCCEEEEEchhHHhCCeEEEEECCCCcceEechHHc
Confidence 57899999999999999999999999999999999999999999998775
|
|
| >PRK12420 histidyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-65 Score=603.64 Aligned_cols=402 Identities=21% Similarity=0.337 Sum_probs=342.3
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC---CCcccccceEEEeccCCceeeecCCCCH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
+.|+|++|++|.++.++++++++++++|++|||++|.||+| .+.. .++...++||+|+|++|+.|+||||+|+
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~~~~~~~~~~~~~~~~~~~~~~D~~g~~l~LRpD~T~ 84 (423)
T PRK12420 5 RNVKGTKDYLPEEQVLRNKIKRALEDVFERYGCKPLETPTLNMYELMSSKYGGGDEILKEIYTLTDQGKRDLALRYDLTI 84 (423)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCEeccccccchHHHHhcccCCCcccccceEEEecCCCceecccccccH
Confidence 36999999999999999999999999999999999999999 3332 2466778999999999999999999999
Q ss_pred HHHHHHHhCC--CCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 786 PFIRWAISNQ--KSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 786 ~iaR~~~~~~--~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
|+||+++++. ..|+|+||+|+|||+++++. +.+||+|+|+|+||.+++.+|+|||+++.++|+.||+ + ++|+|||
T Consensus 85 ~iaR~va~~~~~~~p~r~~y~g~vfR~~~~~~gr~rE~~Q~g~EiiG~~~~~adaEvi~la~~~l~~lg~-~-~~i~l~~ 162 (423)
T PRK12420 85 PFAKVVAMNPNIRLPFKRYEIGKVFRDGPIKQGRFREFIQCDVDIVGVESVMAEAELMSMAFELFRRLNL-E-VTIQYNN 162 (423)
T ss_pred HHHHHHHhCcCCCCCeeEEEEcceECCCCCCCCccceeEECCeeeECCCCCcccHHHHHHHHHHHHHCCC-C-EEEEEcC
Confidence 9999999864 45999999999999988765 4567999999999999999999999999999999999 4 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|++++.++.+..++++++ +.+++++++.+ .+.+++.+.++.+..++ ..++ ...++.
T Consensus 163 ~~l~~~il~~~~~~~~~~~~~~~~ld~~~---------~~~~~~~~~~l-~~~~l~~~~~~~l~~l~-~~~~--~~~~~~ 229 (423)
T PRK12420 163 RKLLNGILQAIGIPTELTSDVILSLDKIE---------KIGIDGVRKDL-LERGISEEMADTICNTV-LSCL--QLSIAD 229 (423)
T ss_pred HHHHHHHHHHcCCChhhhhchhhheechh---------hcCHHHHHHHH-HHcCCCHHHHHHHHHHH-hccC--hhhHHH
Confidence 99999999999999988888877666655 34456665444 45789999999999988 4554 345666
Q ss_pred HhccCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 943 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
++..+ .++.+.+++++| .++.+|+..++.||++++|+++||||+|||+|..+.+ ...+||+|||||+|
T Consensus 230 ~~~~~-~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~Dl~~vr~l~YYtG~vFe~~~~~~~------~~~~i~~GGRYD~L 302 (423)
T PRK12420 230 FKEAF-NNPLVAEGVNELQQLQQYLIALGINENCIFNPFLARGLTMYTGTVYEIFLKDGS------ITSSIGSGGRYDNI 302 (423)
T ss_pred HHHhc-cCHHHHHHHHHHHHHHHHHHHhCCCCcEEEeccccCCCcccceeEEEEEecCCC------ccccccCCccHHHH
Confidence 76533 455666666666 7888899888999999999999999999999987532 12469999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH-cCCeEE
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE-ENIKAQ 1096 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~-~Gi~v~ 1096 (1170)
+++||+. +.++||||||+++|||+.++..... ...+.+|+|++.+ + ...|+++|++||+ .|++|+
T Consensus 303 ~~~f~~~--------~~~~pAvGfa~~~~~l~~~l~~~~~---~~~~~dvlI~~~~-~--~~~a~~ia~~Lr~~~Gi~ve 368 (423)
T PRK12420 303 IGAFRGD--------DMNYPTVGISFGLDVIYTALSQKET---ISSTADVFIIPLG-T--ELQCLQIAQQLRSTTGLKVE 368 (423)
T ss_pred HHHhCCC--------CCCCCceeEEEcHHHHHHHHHhcCC---CCCCceEEEEEcC-C--HHHHHHHHHHHHhhcCCeEE
Confidence 9999652 2357999999999999988763221 2246799999974 3 3579999999999 999999
Q ss_pred EeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 001059 1097 FVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1151 (1170)
Q Consensus 1097 ~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l 1151 (1170)
++.. .+++++++++|++.|+++++++|++|.++++|+||++.+++|..++++++
T Consensus 369 ~~~~-~~~l~~~i~~A~~~g~~~iviig~~e~~~~~v~vr~~~~~~~~~v~~~~~ 422 (423)
T PRK12420 369 LELA-GRKLKKALNYANKENIPYVLIIGEEEVSTGTVMLRNMKEGSEVKVPLSSL 422 (423)
T ss_pred EecC-CcCHHHHHHHHHHcCCCEEEEEChhHHhcCeEEEEECCCCceeeeeHHHc
Confidence 8887 67899999999999999999999999999999999999999999998875
|
|
| >CHL00201 syh histidine-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-63 Score=588.12 Aligned_cols=402 Identities=15% Similarity=0.164 Sum_probs=312.0
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Ccc---cccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T 784 (1170)
..|+|++|++|.++..++.+++.++++|++|||++|.||+| ++..+ |+. ..++||+|.|++|+.++||||+|
T Consensus 5 ~~p~G~~D~lp~~~~~~~~i~~~i~~~~~~~Gy~~I~TP~~E~~e~~~~~~G~~~~~~~~~my~~~d~~g~~l~LRpd~T 84 (430)
T CHL00201 5 QAIRGTKDILPDEINYWQFIHDKALTLLSLANYSEIRTPIFENSSLYDRGIGETTDIVNKEMYRFTDRSNRDITLRPEGT 84 (430)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeeecCcccchHHHHhcccCCcccccccceEEEEcCCCCEEEeCCCCc
Confidence 46999999999999999999999999999999999999999 33333 433 45899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeEEcCCCCCCCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 785 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 785 ~~iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
+|+||+++++. ..|+|+||+|+|||+|+||.||. ||+|+|+|+||..++.+|+|+|.++.++|+.||+++ ++|+
T Consensus 85 ~~iaR~~~~~~~~~~~~p~R~~y~g~vfR~e~~q~GR~Ref~Q~g~EiiG~~~~~aD~Evi~l~~~~l~~lGl~~-~~i~ 163 (430)
T CHL00201 85 AGIVRAFIENKMDYHSNLQRLWYSGPMFRYERPQSGRQRQFHQLGIEFIGSIDARADTEVIHLAMQIFNELQVKN-LILD 163 (430)
T ss_pred HHHHHHHHHccccccCCCeEEEEEcceecCCCCcCCccceeEEeceEEECCCChhhHHHHHHHHHHHHHHcCCCc-eEEE
Confidence 99999987753 24899999999999999886654 699999999999999999999999999999999986 9999
Q ss_pred eCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHH----HHhcCC
Q 001059 860 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG----LRFCGA 935 (1170)
Q Consensus 860 lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~----~~~~g~ 935 (1170)
|||++++... ....+.+..++.... ..++....+.+..++ ......
T Consensus 164 l~~~~~~~~~-------~~~~~~l~~~l~~~~-----------------------~~~~~~~~~~l~~~~~~~l~~k~~~ 213 (430)
T CHL00201 164 INSIGKLEDR-------QSYQLKLVEYLSQYQ-----------------------DDLDTDSQNRLYSNPIRILDSKNLK 213 (430)
T ss_pred ECCCCchhhH-------HHHHHHHHHHHHHHH-----------------------hhcCHHHHHHHHhhhHHHhhccCcc
Confidence 9999887631 011122222222210 001111111111111 000001
Q ss_pred hhhHHHHHhccCC-CChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccc
Q 001059 936 ADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1012 (1170)
Q Consensus 936 ~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GG 1012 (1170)
..++++.+..+.. .+....+.|.++ .++.+|+ .+.||++++||++||||+|||+|+...+ ..++|||||
T Consensus 214 ~~~~~~~a~~l~~~~~~~~~~~l~~~~~~l~~~g~--~~~~Dl~lvRgldYYTG~vFE~~~~~~~------~~~~i~gGG 285 (430)
T CHL00201 214 TQEILDGAPKISDFLSLESTEHFYDVCTYLNLLNI--PYKINYKLVRGLDYYNDTAFEIKTLSSN------GQDTICGGG 285 (430)
T ss_pred HHHHHhhhHHHHhhhhHHHHHHHHHHHHHHHHcCC--cEEECcccccCCccccccEEEEEECCCC------Ccceeeecc
Confidence 1122222222111 122344455555 6677787 4999999999999999999999985422 234799999
Q ss_pred ccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcC
Q 001059 1013 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1092 (1170)
Q Consensus 1013 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~G 1092 (1170)
|||+|+++||+. +.||||||+|+|||+.+|.+... .+..+.+|+|++.+ +....+|++++++||++|
T Consensus 286 RYD~L~~~fg~~----------~~PavGfa~g~erl~~~l~~~~~--~~~~~~~v~v~~~~-~~~~~~a~~ia~~LR~~G 352 (430)
T CHL00201 286 RYDSLIHQLGGP----------KTPAVGCAIGLERLLLIAKDNII--LPKQSIDVYIATQG-LKAQKKGWEIIQFLEKQN 352 (430)
T ss_pred chHHHHHHhCCC----------CCCeeEEEecHHHHHHHHhcccc--CCCCCCCEEEEEcC-HHHHHHHHHHHHHHHhCC
Confidence 999999999754 46999999999999998865322 12345689999875 667889999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhhccCCC
Q 001059 1093 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQFRNPS 1167 (1170)
Q Consensus 1093 i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~~~~~~ 1167 (1170)
++|+++.. .+++++++++|++.|+++++++|++|.++++|+||||.+++|.+++++++++.+.++.+...-|.+
T Consensus 353 i~veid~~-~~~l~k~~k~A~~~~~~~viiiG~~E~~~~~vtvk~l~~~~q~~i~~~~~~~~~~~~~~~~~~~~~ 426 (430)
T CHL00201 353 IKFELDLS-SSNFHKQIKQAGKKRAKACIILGDNEIMDNCITIKWLDEQVQENAQYSNFKQEISYLKKKIAFNKK 426 (430)
T ss_pred CeEEEeeC-CCCHHHHHHHHHHcCCCEEEEEechHHhCCcEEEEECCCCCcEEEcHHHHHHHHHHHHHhhhhhhc
Confidence 99998876 578999999999999999999999999999999999999999999999999999888766555544
|
|
| >PRK12292 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-60 Score=558.89 Aligned_cols=360 Identities=21% Similarity=0.267 Sum_probs=308.2
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEecc-CCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~-~G~~laLRPD~T~~ 786 (1170)
..|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++...++||+|.|+ +|+.++||||+|+|
T Consensus 4 ~~p~G~~D~lp~~~~~~~~i~~~l~~~f~~~Gy~~i~tP~lE~~e~~~~~~g~~~~~~~~~f~d~~~g~~l~LRpD~T~~ 83 (391)
T PRK12292 4 QLPEGIRDLLPEEARKIEEIRRRLLDLFRRWGYEEVITPTLEYLDTLLAGGGAILDLRTFKLVDQLSGRTLGLRPDMTAQ 83 (391)
T ss_pred CCCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCceeeCcchhhHHHHhccCCccchhhhEEEeecCCCCEEEECCCCcHH
Confidence 46999999999999999999999999999999999999999 33333 56778999999999 89999999999999
Q ss_pred HHHHHHhCC---CCceeEEEecCeEEcCCCCCC-CCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 787 FIRWAISNQ---KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 787 iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
+||+++++. ..|+|+||+|+|||+++++.+ .+||+|+|+|+||.+++.+|+|||.++.++|+.+|+.+ +.|+|||
T Consensus 84 iaR~~a~~~~~~~~p~r~~y~g~vfR~~~~~~gr~ref~Q~g~EiiG~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~i~~ 162 (391)
T PRK12292 84 IARIAATRLANRPGPLRLCYAGNVFRAQERGLGRSREFLQSGVELIGDAGLEADAEVILLLLEALKALGLPN-FTLDLGH 162 (391)
T ss_pred HHHHHHHhccCCCCCeEEEeeceeeecCCCcCCCccchhccceEEeCCCCchHHHHHHHHHHHHHHHcCCCC-eEEEecc
Confidence 999998863 459999999999999988865 55799999999999999999999999999999999985 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|+++++++.++.+++++|+ .+. +++.. +++.+.++.+..++ .+.| ..++++.
T Consensus 163 ~~i~~~il~~~~~~~~~~~~l~~~l~~~~~---------~~~----~~~~~--~l~~~~~~~l~~l~-~~~g-~~~~l~~ 225 (391)
T PRK12292 163 VGLFRALLEAAGLSEELEEVLRRALANKDY---------VAL----EELVL--DLSEELRDALLALP-RLRG-GREVLEE 225 (391)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHhcCH---------HHH----HHHHh--cCCHHHHHHHHHHH-HhcC-CHHHHHH
Confidence 999999999999999999999999998873 222 22222 67888888899998 5677 5788888
Q ss_pred HhccCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 943 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
++.+.. +..+.+++++| .+..+|+..++.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 226 ~~~~~~-~~~~~~~l~~L~~l~~~l~~~~~~~~i~~D~~lvrgl~YYtG~vFe~~~~~~~~--------~i~~GGRYD~L 296 (391)
T PRK12292 226 ARKLLP-SLPIKRALDELEALAEALEKYGYGIPLSLDLGLLRHLDYYTGIVFEGYVDGVGN--------PIASGGRYDDL 296 (391)
T ss_pred HHHhcc-ChHHHHHHHHHHHHHHHHHHhCCCceEEEehhhccCCcCccceEEEEEECCCCC--------cccCCcchhhH
Confidence 887544 55556677777 77777887889999999999999999999999976554 59999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEE
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1097 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~ 1097 (1170)
+++||. ++||||||+++|||+.+ . . .....+.+++|+..+ +....+|++++++||+.|++|++
T Consensus 297 ~~~fg~-----------~~pAvGfai~ldrl~~~-~-~---~~~~~~~~~~v~~~~-~~~~~~a~~~~~~Lr~~G~~~~~ 359 (391)
T PRK12292 297 LGRFGR-----------ARPATGFSLDLDRLLEL-Q-L---ELPVEARKDLVIAPD-SEALAAALAAAQELRKKGEIVVL 359 (391)
T ss_pred HHHcCC-----------CCCCceEEeeHHHHHhh-c-c---ccccccCCcEEEEeC-cccHHHHHHHHHHHHHcCCEEEE
Confidence 998853 36999999999999874 1 1 112234466777764 56788999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCC
Q 001059 1098 VPVPDPSLTEQYEYASEHDI 1117 (1170)
Q Consensus 1098 ~~~~~~~l~k~~~~A~~~gi 1117 (1170)
... .+++++++++|++.|+
T Consensus 360 ~~~-~~~~~~~~~~a~~~~~ 378 (391)
T PRK12292 360 ALP-GRNFEDAREYARDRQI 378 (391)
T ss_pred ecC-CCChHHHHHHHhhcCe
Confidence 876 5789999999999998
|
|
| >PRK12421 ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-58 Score=536.76 Aligned_cols=362 Identities=18% Similarity=0.211 Sum_probs=301.4
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEecc-CCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTH-GGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~-~G~~laLRPD~T~~ 786 (1170)
..|+|++|++|.++..++++++.++++|++|||++|.||+| .+... ++..++.||+|.|+ +|+.++||||+|+|
T Consensus 8 ~~p~G~rD~lp~e~~~~~~i~~~l~~~f~~~Gy~~I~tP~~E~~e~~~~~~g~~~~~~~y~f~D~~~g~~l~LRpD~T~~ 87 (392)
T PRK12421 8 LLPDGVADVLPEEAQKIERLRRRLLDLFASRGYQLVMPPLIEYLESLLTGAGQDLKLQTFKLIDQLSGRLMGVRADITPQ 87 (392)
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeCcchhhHHHHhccCCccchhceEEEEcCCCCcEEEECCcCCHH
Confidence 46999999999999999999999999999999999999999 34344 77778899999999 69999999999999
Q ss_pred HHHHHHhC--CCCceeEEEecCeEEcCCCC-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcH
Q 001059 787 FIRWAISN--QKSSFKRYEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 863 (1170)
Q Consensus 787 iaR~~~~~--~~~P~r~~Y~g~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~ 863 (1170)
|||+++++ ...|+|+||+|+|||+++++ ++.+||+|+|+|+||.+++.+|+|||.++.++|++||+++ ++|+|||+
T Consensus 88 iaR~~a~~~~~~~p~R~~Y~g~VfR~~~~~~gr~rEf~Q~GvEiiG~~~~~aDaEvi~l~~e~l~~lgi~~-~~l~ig~~ 166 (392)
T PRK12421 88 VARIDAHLLNREGVARLCYAGSVLHTLPQGLFGSRTPLQLGAELYGHAGIEADLEIIRLMLGLLRNAGVPA-LHLDLGHV 166 (392)
T ss_pred HHHHHHhhcCCCCceEEEEeeeEEEcCCCcCCCcCccceeceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCCH
Confidence 99998875 34699999999999998877 4556799999999999999999999999999999999985 99999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 001059 864 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 943 (1170)
Q Consensus 864 ~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 943 (1170)
++++++++.+|++++.++.+.++++++++. . + .+++...+++...++.+..++ .+.|+. +.++.+
T Consensus 167 ~i~~~il~~l~l~~~~~~~l~~~l~kk~~~---------~---l-~~~~~~~~~~~~~~~~l~~L~-~~~g~~-~~l~~~ 231 (392)
T PRK12421 167 GIFRRLAELAGLSPEEEEELFDLLQRKALP---------E---L-AEVCQNLGVGSDLRRMFYALA-RLNGGL-EALDRA 231 (392)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCHH---------H---H-HHHHHhcCCCHHHHHHHHHHH-HhcCCH-HHHHHH
Confidence 999999999999999999999999988732 1 1 344555678888888899988 566754 566665
Q ss_pred hccCC-CChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 944 RGALP-ADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 944 ~~~~~-~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
.+.+. .++.+.+++++| .+..++....+.||++++||++||||+|||+|..+.+. +||+|||||+|
T Consensus 232 ~~~~~~~~~~~~~~l~~L~~l~~~l~~~~~~~~~~~DlslvrgldYYTG~vFe~~~~~~~~--------~i~~GGRYD~L 303 (392)
T PRK12421 232 LSVLALQDAAIRQALDELKTLAAHLKNRWPELPVSIDLAELRGYHYHTGLVFAAYIPGRGQ--------ALARGGRYDGI 303 (392)
T ss_pred HhhcccCCHHHHHHHHHHHHHHHHHHhhCCCceEEEeeccccCCCCcCCCEEEEEECCCCC--------cccCCCCccch
Confidence 55444 567788888888 45555445569999999999999999999999976543 69999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEE
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1097 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~ 1097 (1170)
+++||. +.||||||+|+|||+.++... . ..++++++.+ +. ..++++|++||+.|++|++
T Consensus 304 ~~~fg~-----------~~pAvGfai~lerL~~~l~~~-----~--~~~~~~~~~~-~~--~~~~~~a~~LR~~G~~~~~ 362 (392)
T PRK12421 304 GEAFGR-----------ARPATGFSMDLKELLALQFLE-----E--EAGAILAPWG-DD--PDLLAAIAELRQQGERVVQ 362 (392)
T ss_pred hHhhCC-----------CCCCceEEeeHHHHHhhcccc-----c--CCceEEeecC-Cc--HHHHHHHHHHHhCCCEEEE
Confidence 998864 369999999999999876421 1 1266777764 32 5688999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCCcEEEEEcCC
Q 001059 1098 VPVPDPSLTEQYEYASEHDIKCLVILTDT 1126 (1170)
Q Consensus 1098 ~~~~~~~l~k~~~~A~~~gi~~~iiig~~ 1126 (1170)
.+.. .-.+| +.++...++++++
T Consensus 363 ~~~~------~~~~~-~~~~~~~~~~~~~ 384 (392)
T PRK12421 363 LLPG------DDGSS-EPGCDHRLVLQDG 384 (392)
T ss_pred eCCC------cchhH-HhCCCeEEEEECC
Confidence 7652 22345 6699999998854
|
|
| >TIGR00442 hisS histidyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-57 Score=531.61 Aligned_cols=380 Identities=21% Similarity=0.281 Sum_probs=309.2
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Ccc---cccceEEEeccCCceeeecCCCCH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQ---FKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~---~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
.|+|++|++|.++..++++++.++++|.+|||++|.||+| .+... ++. ..++||+|.|++|+.++||||+|+
T Consensus 2 ~p~G~~d~~p~~~~~~~~i~~~i~~~f~~~Gy~~i~~P~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpD~T~ 81 (397)
T TIGR00442 2 APRGTRDFLPEEMIKWQYIEETIREVFELYGFKEIRTPIFEYTELFARKVGEETDIVEKEMYTFKDKGGRSLTLRPEGTA 81 (397)
T ss_pred CCCCcCCCCHHHHHHHHHHHHHHHHHHHHcCCeEecCcccchHHHhhhccCccccccccceEEEECCCCCEEeecCCCcH
Confidence 5899999999999999999999999999999999999999 33332 232 458999999999999999999999
Q ss_pred HHHHHHHhCC---CCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeC
Q 001059 786 PFIRWAISNQ---KSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLN 861 (1170)
Q Consensus 786 ~iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg 861 (1170)
|+||+++++. ..|+|+||+|+|||+++++. +.+||+|+|+|+||.++..+|+|+|.++.++|+.+|+++ ++|+||
T Consensus 82 ~iaR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~ref~Q~g~eiig~~~~~~d~E~i~l~~e~l~~lg~~~-~~i~i~ 160 (397)
T TIGR00442 82 PVARAVIENKLLLPKPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEIIALAAEILKELGIKD-FTLEIN 160 (397)
T ss_pred HHHHHHHhcccccCCCeEEEEEcCeecCCCCCCCcccceEEcCeeeeCCCCHHHHHHHHHHHHHHHHHcCCCc-eEEEec
Confidence 9999998863 35999999999999987764 456799999999999999999999999999999999975 999999
Q ss_pred cHHHHHHHHHHhCCCHHHHHHHHHHHHH-hcCCCCCcccccchHHHHHHHHHHH-cCCcHHHHHHHHHHHHHhcCChhhH
Q 001059 862 HGDLLEAIWSWAGIKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQE-LNLAEAVVNRLQTVGLRFCGAADQA 939 (1170)
Q Consensus 862 ~~~il~~~l~~lgl~~~~~~~l~~~l~~-~d~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~l~~l~~~~~g~~~~~ 939 (1170)
|+++++++++ .+..+..++++ +|++. .+.+ .+++.. .++..+..+.+..++. . . ..+
T Consensus 161 ~~~i~~~~~~-------~~~~l~~~l~~~~~~~~---------~~~~-~~l~~~~~~~~~~~~~~~~~~~~-~--~-~~~ 219 (397)
T TIGR00442 161 SLGILEGRLE-------YREALLRYLDKHLDKLG---------EDSV-RRLEKNPLRILDSKNEKIQELLK-E--A-PKI 219 (397)
T ss_pred CcccHHHHHH-------HHHHHHHHHHHhHhhcC---------HHHH-HHHhhccccCchhhhHHHHHHHh-c--C-HHH
Confidence 9999999987 36777788887 56432 2222 223322 3455555666666652 1 1 122
Q ss_pred HHHHhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 940 LPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 940 l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
+..+ +....+.|+++ .++.+|+ .+.|||+++|+++||||+||++|..+.+. ..+||+|||||+|
T Consensus 220 ~~~~------~~~~~~~l~~l~~~l~~~~~--~i~~dl~~~r~~~YYtG~vFe~~~~~~~~------~~~i~~GGRYD~L 285 (397)
T TIGR00442 220 LDFL------DEESRAHFEELKELLDALGI--PYKIDPSLVRGLDYYTGTVFEFVTDELGA------QGTICGGGRYDGL 285 (397)
T ss_pred HHHh------hHHHHHHHHHHHHHHHHcCC--CEEECCccccCchhhcceEEEEEECCCCc------cceeeeccchHHH
Confidence 2221 23455555655 7777888 39999999999999999999999875431 2479999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEE
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF 1097 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~ 1097 (1170)
+++||+. +.||||||+++|||+.++...........+.+++|++.+ ++...++++++.+||+.|++|++
T Consensus 286 ~~~f~~~----------~~~avGfs~~~~~l~~~l~~~~~~~~~~~~~~vlV~~~~-~~~~~~~~~i~~~Lr~~gi~v~~ 354 (397)
T TIGR00442 286 VEELGGP----------PTPAVGFAIGIERLLLLLEELGLEPPEESSPDVYVVPLG-EEAELEALKLAQKLRKAGIRVEV 354 (397)
T ss_pred HHHhCCC----------CCceEEeeecHHHHHHHHHhcCCCCCCCCCCcEEEEEeC-HHHHHHHHHHHHHHHhCCCeEEE
Confidence 9999653 369999999999999888643222223456789999875 66788999999999999999998
Q ss_pred eeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 001059 1098 VPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1141 (1170)
Q Consensus 1098 ~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~ 1141 (1170)
.+. .+++++++++|++.|++++|++|++|.+.++|+|||+.+|
T Consensus 355 ~~~-~~~l~k~~~~a~~~g~~~~i~ig~~e~~~~~v~vrnl~~~ 397 (397)
T TIGR00442 355 DLG-GRKLKKQLKYADKLGARFAVILGEDELANGTVTLKDLETG 397 (397)
T ss_pred eCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEeCCCC
Confidence 776 5789999999999999999999999999999999999875
|
This model finds a histidyl-tRNA synthetase in every completed genome. Apparent second copies from Bacillus subtilis, Synechocystis sp., and Aquifex aeolicus are slightly shorter, more closely related to each other than to other hisS proteins, and actually serve as regulatory subunits for an enzyme of histidine biosynthesis. They were excluded from the seed alignment and score much lower than do single copy histidyl-tRNA synthetases of other genomes not included in the seed alignment. These putative second copies of HisS score below the trusted cutoff. The regulatory protein kinase GCN2 of Saccharomyces cerevisiae (YDR283c), and related proteins from other species designated eIF-2 alpha kinase, have a domain closely related to histidyl-tRNA synthetase that may serve to detect and respond to uncharged tRNA(his), an indicator of amino acid starvation; these regulatory proteins are not orthologous and so score below the noise cutoff. |
| >PRK00037 hisS histidyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-56 Score=531.51 Aligned_cols=381 Identities=19% Similarity=0.283 Sum_probs=300.5
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Cccc---ccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQF---KRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~---~~~my~f~D~~G~~laLRPD~T 784 (1170)
..|+|++|++|.++..++.+++.++++|++|||++|.||+| ++... ++.. .++||+|.|++|+.++||||+|
T Consensus 5 ~~p~G~~d~~p~~~~~~~~i~~~i~~~~~~~Gy~ei~tP~le~~~~~~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpd~T 84 (412)
T PRK00037 5 QAPRGTRDILPEESAKWQYVEDTIREVFERYGFSEIRTPIFEYTELFKRKVGEETDIVEKEMYTFQDKGGRSLTLRPEGT 84 (412)
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCeEeeccccchHHHhccccCcccccccceeEEEEcCCCCEEEecCCCc
Confidence 47899999999999999999999999999999999999999 33333 3333 6899999999999999999999
Q ss_pred HHHHHHHHhCCCCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCc-
Q 001059 785 LPFIRWAISNQKSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH- 862 (1170)
Q Consensus 785 ~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~- 862 (1170)
+|+||+++++...|+|+||+|+|||+++++. +.+||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ +.+.|||
T Consensus 85 ~~~ar~~~~~~~~p~r~~~~g~vfR~e~~~~gr~ref~Q~g~ei~g~~~~~~d~E~i~~~~~~l~~lg~~~-~~~~l~~~ 163 (412)
T PRK00037 85 APVVRAVIEHKLQPFKLYYIGPMFRYERPQKGRYRQFHQFGVEVIGSDSPLADAEVIALAADILKALGLKG-LKLLINSL 163 (412)
T ss_pred HHHHHHHHhCCCCCeEEEEEcCccccCCCCCCcccceEEcCeeeeCCCCcchhHHHHHHHHHHHHHcCCCc-eeeeeccC
Confidence 9999999987668999999999999987664 456799999999999999999999999999999999985 7776554
Q ss_pred ---------HHHHHHHHHHhCCCH---HHHHHH-HHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 001059 863 ---------GDLLEAIWSWAGIKA---EHREKV-AELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 929 (1170)
Q Consensus 863 ---------~~il~~~l~~lgl~~---~~~~~l-~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 929 (1170)
+++++++++. ++++ +..+.+ ..++...++ .. .
T Consensus 164 ~~~~~~~~~~~~l~~~l~~-~~~~l~~~~~~~~~~~~~~~~~~----------------------~~--~---------- 208 (412)
T PRK00037 164 GDFEIRANYRKALVGFLEK-GLDELDEDSKRRLETNPLRILDK----------------------KD--K---------- 208 (412)
T ss_pred CCHHHhHHHHHHHHHHHHh-CchhhchHHHHHHhhCchhhhcc----------------------cc--h----------
Confidence 4555555554 3332 000000 000001110 00 0
Q ss_pred HHhcCChhhHHHHHhccC-CCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccc
Q 001059 930 LRFCGAADQALPRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1006 (1170)
Q Consensus 930 ~~~~g~~~~~l~~l~~~~-~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~ 1006 (1170)
+. ...++.+..+. ..+....+++++| +++.+|+ ++.||++++||++||||+|||+|..+.+. .+
T Consensus 209 ----~~-~~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~--~i~~Dl~~~r~l~YYtG~vFe~~~~~~g~------~~ 275 (412)
T PRK00037 209 ----ED-QELLKDAPKLLDYLDEESKEHFEELKELLDALGI--PYVIDPRLVRGLDYYTGTVFEFVTDDLGA------QG 275 (412)
T ss_pred ----hh-HHHHhcchHHHHHhhHHHHHHHHHHHHHHHHcCC--CEEECCCcccChhhccceEEEEEECCCCc------cc
Confidence 00 00111100000 0123345566666 6777777 59999999999999999999999865332 25
Q ss_pred eeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHH
Q 001059 1007 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVA 1086 (1170)
Q Consensus 1007 ~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~ 1086 (1170)
+||+|||||+|+++||+. +.||||||+++|||+.+|.+... ++.+++|++.+ ++...+|+++++
T Consensus 276 ~i~~GGRYD~L~~~f~~~----------~~pavGfs~~le~l~~~l~~~~~-----~~~~vlI~~~~-~~~~~~a~~i~~ 339 (412)
T PRK00037 276 TVCGGGRYDGLVEQFGGP----------PTPAVGFAIGVERLLLLLEELGE-----EPVDVYVVPLG-EDAELAALKLAE 339 (412)
T ss_pred eeeeccchhHHHHHhCCC----------CCceEEEEEcHHHHHHHHHhcCC-----CCCCEEEEEeC-hHHHHHHHHHHH
Confidence 799999999999999643 46999999999999988763321 46789999985 556788999999
Q ss_pred HHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 001059 1087 ELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1087 ~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l 1159 (1170)
.||+.|++|++... ++++++++++|+++|++++|++|++|.++|+|+|||+.++++..+++++++++|.+.+
T Consensus 340 ~Lr~~Gi~v~i~~~-~~~~~~~~~~a~~~gi~~~viig~~e~~~~~v~vr~~~~~~~~~v~~~el~~~i~~~~ 411 (412)
T PRK00037 340 KLRAAGIRVELDYG-GRKLKKQFKYADKSGARFVLILGEDELANGTVTVKDLRTGEQQTVPLDELVEALKELL 411 (412)
T ss_pred HHHHCCCeEEEeCC-CCCHHHHHHHHHHcCCCEEEEEChhHHhCCeEEEEECCCCceEEeeHHHHHHHHHHhh
Confidence 99999999998665 5789999999999999999999999999999999999999999999999999988764
|
|
| >TIGR00443 hisZ_biosyn_reg ATP phosphoribosyltransferase, regulatory subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-52 Score=477.10 Aligned_cols=299 Identities=23% Similarity=0.335 Sum_probs=261.9
Q ss_pred ccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhC
Q 001059 719 IQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN 794 (1170)
Q Consensus 719 ~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~ 794 (1170)
+|++|.++..++.+++.++++|++|||++|.||+| .+...+....++||+|.|++|+.++||||+|+|+||+++++
T Consensus 1 ~D~~p~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~le~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~T~~iaR~~~~~ 80 (314)
T TIGR00443 1 RDLLPEEAARKEEIERQLQDVFRSWGYQEIITPTLEYLDTLSAGGGILNEDLFKLFDSLGRVLGLRPDMTTPIARAVSTR 80 (314)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHcCCeeccCcchhhHHHhcccCCcchhceEEEECCCCCEEeecCcCcHHHHHHHHHh
Confidence 58999999999999999999999999999999999 33334336788999999999999999999999999998874
Q ss_pred ---CCCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHH
Q 001059 795 ---QKSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIW 870 (1170)
Q Consensus 795 ---~~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l 870 (1170)
...|+|+||+|+|||+++++. +.+||+|+|+|+||.++..+|+|+|.++.++|+.+|+++ +.|.|||+++++.++
T Consensus 81 ~~~~~~p~r~~y~g~VfR~~~~~~gr~re~~Q~g~Eiig~~~~~adaEvi~l~~~~l~~lg~~~-~~i~l~~~~il~~il 159 (314)
T TIGR00443 81 LRDRPLPLRLCYAGNVFRTNESGAGRSREFTQAGVELIGAGGPAADAEVIALLIEALKALGLKD-FKIELGHVGLVRALL 159 (314)
T ss_pred cccCCCCeEEEEeceEeecCCCcCCCcccccccceEEeCCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCcHHHHHHHH
Confidence 246999999999999988765 556799999999999999999999999999999999985 999999999999999
Q ss_pred HHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCC
Q 001059 871 SWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD 950 (1170)
Q Consensus 871 ~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~ 950 (1170)
+.+++++++++.+++++++++.. .. ++++.+.+++.+.++.+..++ .+.|++.+++++++++. .+
T Consensus 160 ~~~~~~~~~~~~l~~~l~~~~~~---------~~----~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~~l~~l~~~~-~~ 224 (314)
T TIGR00443 160 EEAGLPEEAREALREALARKDLV---------AL----EELLAELGLDPEVRERLLALP-RLRGDGEEVLEEARALA-GS 224 (314)
T ss_pred HHcCCCHHHHHHHHHHHHhcCHH---------HH----HHHHHhcCCCHHHHHHHHHHH-HhcCChHHHHHHHHHhc-cC
Confidence 99999999999999999998832 11 345556788989999999998 57887788999998844 46
Q ss_pred hhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhccccc
Q 001059 951 KPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDRE 1025 (1170)
Q Consensus 951 ~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~ 1025 (1170)
+.+.+++++| .++.+|+..+|.||++++|+++||||+|||+|..+.+. +||+|||||+|+++||.
T Consensus 225 ~~~~~~l~~l~~~~~~l~~~~~~~~i~~D~~~~r~~~YYtGivFe~~~~~~~~--------~i~~GGRYD~L~~~fg~-- 294 (314)
T TIGR00443 225 ETAEAALDELEAVLELLEARGVEEYISLDLGLVRGYHYYTGLIFEGYAPGLGA--------PIAGGGRYDNLLGRFGR-- 294 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCeEEEecccccCCCCccceEEEEEECCCCC--------cccCCccHHHHHHHcCC--
Confidence 6667777777 77888887789999999999999999999999865443 69999999999998853
Q ss_pred ccccCCCCCCCCceEEeccHHHHHhhc
Q 001059 1026 YVGYASRTNPPSGVGASLALETIIQHY 1052 (1170)
Q Consensus 1026 ~~~~~g~~~~~pAvGfaiglerL~~~L 1052 (1170)
++||||||+++|||+.++
T Consensus 295 ---------~~~AvGfa~~~d~l~~~l 312 (314)
T TIGR00443 295 ---------PLPATGFALNLERLLEAL 312 (314)
T ss_pred ---------CCCCceEEecHHHHHHHh
Confidence 469999999999998765
|
Apparant second copies of histidyl-tRNA synthetase, found in Bacillus subtilis, Synechocystis sp., Aquifex aeolicus, and others, are in fact a regulatory subunit of ATP phosphoribosyltransferase, and usually encoded by a gene adjacent to that encoding the catalytic subunit. |
| >PRK12295 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-51 Score=477.87 Aligned_cols=305 Identities=20% Similarity=0.270 Sum_probs=252.7
Q ss_pred hhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHHHHHHHhC-CCCcee
Q 001059 727 ELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN-QKSSFK 800 (1170)
Q Consensus 727 ~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~-~~~P~r 800 (1170)
...++++++++++|++|||.+|+||+| .+..+ ++...++||+|.|++|+.++||||+|+||||.++++ ...|.|
T Consensus 5 ~~~~~i~~~i~~~f~~~Gy~~I~tP~lE~~e~~~~~~g~~~~~~~~~f~D~~G~~l~LRpD~T~piaR~~~~~~~~~p~R 84 (373)
T PRK12295 5 SASAAAAEALLASFEAAGAVRVDPPILQPAEPFLDLSGEDIRRRIFVTSDENGEELCLRPDFTIPVCRRHIATAGGEPAR 84 (373)
T ss_pred hhHHHHHHHHHHHHHHcCCEEeeCCccccHHHhhhccCchhhcceEEEECCCCCEEeeCCCCcHHHHHHHHHcCCCCCeE
Confidence 345689999999999999999999999 33333 677788999999999999999999999999988774 456999
Q ss_pred EEEecCeEEcCCCCCCCCceeEeEEEEeCCC-CcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHH
Q 001059 801 RYEISSVYRRAIGHSPPNRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEH 879 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~-~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~ 879 (1170)
+||+|+|||++ .++.+||+|+|+|+||.. ++.+|+|||.++.++|+.+|+.+ ++|+|||+++++++++.+++++++
T Consensus 85 ~~Y~g~VfR~~--~gr~rEf~Q~GvEiiG~~~~~~aDaEvi~l~~~~L~~lgl~~-~~i~ig~~~il~~ll~~l~l~~~~ 161 (373)
T PRK12295 85 YAYLGEVFRQR--RDRASEFLQAGIESFGRADPAAADAEVLALALEALAALGPGD-LEVRLGDVGLFAALVDALGLPPGW 161 (373)
T ss_pred EEEEccEEECC--CCCCCcceEeeEEeeCCCCCccchHHHHHHHHHHHHHcCCCc-eEEEeCCHHHHHHHHHHcCCCHHH
Confidence 99999999998 567788999999999975 47999999999999999999985 999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCC----Cc-------------------------------------ccccchHHHHHHHHHHHc---
Q 001059 880 REKVAELLAMMGSLRP----QS-------------------------------------SEWKSKWVVIRRQLLQEL--- 915 (1170)
Q Consensus 880 ~~~l~~~l~~~d~~~~----~~-------------------------------------~~~~~~~~~~~~~~~~~~--- 915 (1170)
+++++++++++++... .. ...+..+.++.+++....
T Consensus 162 ~~~l~~~i~kk~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~~~r~~~ei~~~l~~~~~~~ 241 (373)
T PRK12295 162 KRRLLRHFGRPRSLDALLARLAGPRVDPLDEHAGVLAALADEAAARALVEDLMSIAGISPVGGRSPAEIARRLLEKAALA 241 (373)
T ss_pred HHHHHHHHhccchHHHHHHhhcccccccccchhhhhhhhccchhhhhhhhhhhhhccccccccccHHHHHHHHHhhhccc
Confidence 9999999998885210 00 000112233333333221
Q ss_pred ---CCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCCh-hHHHHHHHH-----HHHHccCc-ceEEEccCCCCCCCccc
Q 001059 916 ---NLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADK-PTRKALDEL-----YLRIWRIE-KNIYIDALMPPIESYHR 985 (1170)
Q Consensus 916 ---~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~-~~~~~l~~L-----~l~~~g~~-~~i~~Dl~lvrgldYYt 985 (1170)
+++.+.++.+..++ .+.|+.++++++++.+...++ .+.+++++| .++.+|+. +++.||++++||++|||
T Consensus 242 ~~~~~~~~~~~~l~~l~-~~~g~~~~~~~~l~~l~~~~~~~~~~al~~L~~l~~~l~~~g~~~~~v~~D~~~vrgl~YYT 320 (373)
T PRK12295 242 AAARLPAEALAVLERFL-AISGPPDAALAALRALAADAGLDLDAALDRFEARLAALAARGIDLERLRFSASFGRPLDYYT 320 (373)
T ss_pred ccCCCCHHHHHHHHHHH-HccCCHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHcCCCcceEEEecccccCCcccc
Confidence 78888899999998 688888889999998766556 677788777 77888886 67999999999999999
Q ss_pred ceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhh
Q 001059 986 NLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQH 1051 (1170)
Q Consensus 986 G~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~ 1051 (1170)
|+|||+|..+.+ ..+||+|||||+|++.||+ +.++||||||+|+|||+++
T Consensus 321 GiVFe~~~~~~~-------~~~I~~GGRYD~Li~~fg~---------~~~~pAvGfai~~drl~~~ 370 (373)
T PRK12295 321 GFVFEIRAAGNG-------DPPLAGGGRYDGLLTRLGA---------GEPIPAVGFSIWLDRLAAL 370 (373)
T ss_pred ceEEEEEECCCC-------CCcccCCcCHHHHHHHhCC---------CCCCCeeEEEEcHHHHHhh
Confidence 999999987541 1379999999999998863 1357999999999999765
|
|
| >PF13393 tRNA-synt_His: Histidyl-tRNA synthetase; PDB: 3HRI_E 3HRK_A 3LC0_A 1Z7N_A 1Z7M_D 3NET_A 1H4V_B 3OD1_A 4E51_B 3RAC_A | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-50 Score=461.91 Aligned_cols=297 Identities=25% Similarity=0.386 Sum_probs=243.9
Q ss_pred ccccccchhhhhhhhHHhHHHHHHHHcCCccccccceec----cCCCcccccceEEEeccCCceeeecCCCCHHHHHHHH
Q 001059 717 SSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL----LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAI 792 (1170)
Q Consensus 717 G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~ 792 (1170)
|++|++|.+++.++++++.++++|++|||++|.||+|+. ........+++|+|.|++|+.++||||+|+|+||+++
T Consensus 1 G~~d~~~~~~~~~~~i~~~l~~~f~~~Gy~~i~~P~le~~~~~~~~~~~~~~~~~~~~D~~G~~l~LR~D~T~~iaR~~a 80 (311)
T PF13393_consen 1 GFRDLLPEEARKRERIESKLREVFERHGYEEIETPLLEYYELFLDKSGEDSDNMYRFLDRSGRVLALRPDLTVPIARYVA 80 (311)
T ss_dssp T---B-HHHHHHHHHHHHHHHHHHHHTT-EE-B--SEEEHHHHHCHSSTTGGCSEEEECTTSSEEEE-SSSHHHHHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEEECCeEeecHHhhhccccchhhhEEEEecCCcEeccCCCCcHHHHHHHH
Confidence 899999999999999999999999999999999999922 2223333559999999999999999999999999999
Q ss_pred hCC--CCceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHH-HcCCCcceEEEeCcHHHHHH
Q 001059 793 SNQ--KSSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVT-RFFHAESCDIHLNHGDLLEA 868 (1170)
Q Consensus 793 ~~~--~~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~-~lgi~~~~~i~lg~~~il~~ 868 (1170)
++. ..|.|+||+|+|||+++++. +.+||+|+|+|+||.+++.+|+|+|.++.++|+ .+|+.+ ++|+|||+++++.
T Consensus 81 ~~~~~~~~~r~~y~g~vfR~~~~~~g~~re~~Q~g~Eiig~~~~~~daEvi~l~~e~l~~~l~~~~-~~i~i~h~~i~~~ 159 (311)
T PF13393_consen 81 RNLNLPRPKRYYYIGPVFRYERPGKGRPREFYQCGFEIIGSSSLEADAEVIKLADEILDRELGLEN-FTIRINHTGILDA 159 (311)
T ss_dssp HCCGSSSSEEEEEEEEEEEEETTTTTBESEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHTTTS-EEEEEEEHHHHHH
T ss_pred HhcCcCCCceEEEEcceeeccccCCCCCceeEEEEEEEECCCCHHHHHHHHHHHHHHHHhhcCCCC-cEEEEcCchhhHH
Confidence 974 67999999999999987764 556799999999999999999999999999997 999975 9999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 001059 869 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 948 (1170)
Q Consensus 869 ~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 948 (1170)
+++.+|+++++++.+..++.+++. .++ ++++.+.+++.+..+.+..++ .+.|+.+.+.+.++. +.
T Consensus 160 il~~~gl~~~~~~~l~~~l~~~~~------------~~~-~~~~~~~~l~~~~~~~l~~l~-~~~g~~~~l~~~~~~-~~ 224 (311)
T PF13393_consen 160 ILEHLGLPEDLRRELLEALDKKDL------------SEL-KELLSELGLSSESLEILDKLP-ELEGDPEALEELLES-LP 224 (311)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHTHH------------HHH-HHHHHHTTTTHHHHHHHHHHH-HHHHSHHHHHHHHHH-HT
T ss_pred HHhhcCCChhhhhhhhhheecccc------------ccc-hhhhcccccchhhhhhhhccc-cccchHHHHHHHHHH-Hh
Confidence 999999999999999999988762 223 456667889999999999988 566775554444444 45
Q ss_pred CChhHHHHHHHH-----HHHHcc-CcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcc
Q 001059 949 ADKPTRKALDEL-----YLRIWR-IEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1022 (1170)
Q Consensus 949 ~~~~~~~~l~~L-----~l~~~g-~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1022 (1170)
.++.+.+++++| +++.+| ...+|.||++++|+++||||+||++|..+.+. .||+|||||+|+++||
T Consensus 225 ~~~~~~~~~~~L~~l~~~l~~~~~~~~~i~~D~~~~r~~~YYtG~vFe~~~~~~~~--------~ia~GGRYD~L~~~fg 296 (311)
T PF13393_consen 225 SSPALQEALEELEELLKLLEALGYPSIKIIFDLSLVRGLDYYTGIVFEVYAPGRGS--------PIAGGGRYDNLLEQFG 296 (311)
T ss_dssp CSCHHHHHHHHHHHHHHHHHHCTHTTTTEEEETT-GTSSTTEESEEEEEEETTSSS--------ESEEEEEETTHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcccCceEEEChhhccchhhcCCEEEEEEEcCCCc--------eEecccChhHHHHHhC
Confidence 555555666666 788888 57899999999999999999999999976554 7999999999999985
Q ss_pred cccccccCCCCCCCCceEEeccHHHH
Q 001059 1023 DREYVGYASRTNPPSGVGASLALETI 1048 (1170)
Q Consensus 1023 ~~~~~~~~g~~~~~pAvGfaiglerL 1048 (1170)
. ++||||||+++|||
T Consensus 297 ~-----------~~~AvGfai~ld~L 311 (311)
T PF13393_consen 297 K-----------PIPAVGFAIGLDRL 311 (311)
T ss_dssp S-----------S-EEEEEEEEHHHH
T ss_pred C-----------CCceEEEEEEeccC
Confidence 4 36999999999997
|
... |
| >PRK12293 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-48 Score=435.74 Aligned_cols=268 Identities=18% Similarity=0.231 Sum_probs=216.7
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccceeccCC-CcccccceEEEeccCCceeeecCCCCHHHHHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWA 791 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~ 791 (1170)
..|+|++|++|.++..+++++++++++|++|||++|.||+|++... .....++||+|.|++|+.++||||+|+||||++
T Consensus 6 ~~p~G~rD~lp~e~~~~~~i~~~l~~vf~~~Gy~~I~tP~lE~~e~~~~~~~~~~y~~~D~~g~~l~LRpD~T~~iaR~~ 85 (281)
T PRK12293 6 EIPQGSKLYFGKSAKLKREIENVASEILYENGFEEIVTPFFSYHQHQSIADEKELIRFSDEKNHQISLRADSTLDVVRIV 85 (281)
T ss_pred CCCCcccccCcHHHHHHHHHHHHHHHHHHHcCCeEeeccceeehhhhcccchhceEEEECCCCCEEEECCcCCHHHHHHH
Confidence 4699999999999999999999999999999999999999955444 445679999999999999999999999999999
Q ss_pred HhCC---CCceeEEEecCeEEcCCCCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHH
Q 001059 792 ISNQ---KSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEA 868 (1170)
Q Consensus 792 ~~~~---~~P~r~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~ 868 (1170)
+++. ..|+|+||+|+|||+++ +||+|+|+|+||.+++ +|+|++|.++|+++|++ ++|+|||++++++
T Consensus 86 a~~~~~~~~p~r~~Y~g~vfR~~~-----rEf~Q~GvEliG~~~~---~Evi~la~~~l~~lgl~--~~i~ig~~~i~~~ 155 (281)
T PRK12293 86 TKRLGRSTEHKKWFYIQPVFRYPS-----NEIYQIGAELIGEEDL---SEILNIAAEIFEELELE--PILQISNIKIPKL 155 (281)
T ss_pred HHhcccCCCceeEEEeccEEecCC-----CcccccCeEeeCCCCH---HHHHHHHHHHHHHcCCC--CEEEECCHHHHHH
Confidence 8753 35999999999999863 7999999999999986 69999999999999995 5799999999999
Q ss_pred HHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCC
Q 001059 869 IWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALP 948 (1170)
Q Consensus 869 ~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~ 948 (1170)
+++.++++.+..+.. .++ +++. +..+.+..++ .+.+. + .++++...
T Consensus 156 ~l~~~~~~~~~~~~~--~~~---------------------~~~~------~~~~~l~~l~-~~~~~-~-~~~~~~~~-- 201 (281)
T PRK12293 156 VAEILGLDIEVFKKG--QIE---------------------KLLA------QNVPWLNKLV-RIKTL-E-DLDEVIEL-- 201 (281)
T ss_pred HHHHcCCCHHHHhHH--HHH---------------------HHHH------HhHHHHHHHH-hcCCH-H-HHHHHHhh--
Confidence 999999987654221 011 1111 1223344444 23331 2 23333331
Q ss_pred CChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccc
Q 001059 949 ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREY 1026 (1170)
Q Consensus 949 ~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~ 1026 (1170)
.+....+++++| .++.+++. .+.||++++||++||||+|||+|..+ .+||||||||+.
T Consensus 202 ~~~~~~~~l~~l~~~l~~l~~~-~~~~Dl~~vrgl~YYTGivFe~~~~~----------~~i~~GGRYD~~--------- 261 (281)
T PRK12293 202 VPDEIKEELEKLKELAESIKYE-NLVIAPLYYAKMRYYDDLFFRFFDGN----------STLASGGNYEID--------- 261 (281)
T ss_pred CCHHHHHHHHHHHHHHHHcCCC-cEEEccccccCCCCccceEEEEEECC----------ceeccccCCCCC---------
Confidence 235677888888 77777764 49999999999999999999999863 169999999931
Q ss_pred cccCCCCCCCCceEEeccHHHHHhhc
Q 001059 1027 VGYASRTNPPSGVGASLALETIIQHY 1052 (1170)
Q Consensus 1027 ~~~~g~~~~~pAvGfaiglerL~~~L 1052 (1170)
+.||||||+|+|||+.+|
T Consensus 262 --------~~PAvGfa~~ld~l~~~l 279 (281)
T PRK12293 262 --------GISSSGFALYTDNLIEIL 279 (281)
T ss_pred --------CCCcceEEeeHHHHHHHh
Confidence 369999999999998775
|
|
| >KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-48 Score=428.53 Aligned_cols=261 Identities=28% Similarity=0.399 Sum_probs=219.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-----hhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
+.+.|.+.+.||+|+||.|.+|..+.||+.||||+++.+.... .....+.+|+++|++|+|||||++++.|..
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~-- 247 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV-- 247 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec--
Confidence 4578889999999999999999999999999999998654322 122346799999999999999999998843
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
..+.||||||++ |+|.+.+...+.+.+...+.+++|++.|+
T Consensus 248 --------------------------------------~ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~av 289 (475)
T KOG0615|consen 248 --------------------------------------PDSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAV 289 (475)
T ss_pred --------------------------------------CCceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHH
Confidence 456799999996 69999999999999999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.|||++||+||||||+|||+..+ ..+||+|||+|++..... .+.+.||||.|.|||++.+.
T Consensus 290 kYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~s----------------fm~TlCGTpsYvAPEVl~~k 353 (475)
T KOG0615|consen 290 KYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGS----------------FMKTLCGTPSYVAPEVLASK 353 (475)
T ss_pred HHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccce----------------ehhhhcCCccccChhheecC
Confidence 99999999999999999999876 789999999999864221 24678999999999999874
Q ss_pred C--CCCccchhHHHHHHHHHhhc---CCCchhHHH-HHHHHhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 584 P--KIDEKADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 584 ~--~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~-~~~~~l~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+ .+..++||||+||+||-+++ ||....... ...++...... .|+.|..++.++.+||.+||..||++|||+++
T Consensus 354 g~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~e 433 (475)
T KOG0615|consen 354 GVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADE 433 (475)
T ss_pred CeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHH
Confidence 3 25568999999999999997 776554443 33333333333 46789999999999999999999999999999
Q ss_pred HHhccCCCCchHH
Q 001059 657 LLQDALPPQMEYE 669 (1170)
Q Consensus 657 iL~~~~~~~~~~~ 669 (1170)
+|+|||+.-....
T Consensus 434 aL~hpW~~~~~~~ 446 (475)
T KOG0615|consen 434 ALNHPWFKDAPCL 446 (475)
T ss_pred HhcChhhhccccc
Confidence 9999999866533
|
|
| >COG3705 HisZ ATP phosphoribosyltransferase involved in histidine biosynthesis [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-47 Score=431.68 Aligned_cols=368 Identities=20% Similarity=0.202 Sum_probs=289.8
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
..|.|++|.+|.+++.++.|++++++.|.+|||+.|+||++ .+... ++..+++||+|+|..|+.+|||||||+||
T Consensus 4 ~lp~g~rd~Lp~e~~~~~~i~~~l~~~f~~~Gy~~v~tP~lE~~d~~l~~~g~~l~~~~f~l~d~~g~~l~LRpD~T~pV 83 (390)
T COG3705 4 QLPEGIRDVLPLEARRKEEIRDQLLALFRAWGYERVETPTLEPADPLLDGAGEDLRRRLFKLEDETGGRLGLRPDFTIPV 83 (390)
T ss_pred cCCCcchhcchhHHhhHHHHHHHHHHHHHHhCCccccccccchhhhhhhccchhhhhhheEEecCCCCeEEecccccHHH
Confidence 57899999999999999999999999999999999999999 22223 67789999999999999999999999999
Q ss_pred HHHHHhCCC-CceeEEEecCeEEcCCCCCCCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHH
Q 001059 788 IRWAISNQK-SSFKRYEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDL 865 (1170)
Q Consensus 788 aR~~~~~~~-~P~r~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i 865 (1170)
+|.+++... .|.|+||.|+|||..+...+++ ||+|+|||++|.++..||+|||.+++.+|+++|+.+ ++|.|||++|
T Consensus 84 aR~~~~~~~~~P~Rl~Y~G~Vfr~~~~~~g~~~Ef~QaGiEllG~~~~~ADaEvi~la~~~L~~~gl~~-~~l~LG~~gi 162 (390)
T COG3705 84 ARIHATLLAGTPLRLSYAGKVFRAREGRHGRRAEFLQAGIELLGDDSAAADAEVIALALAALKALGLAD-LKLELGHAGI 162 (390)
T ss_pred HHHHHHhcCCCCceeeecchhhhcchhccCcccchhhhhhHHhCCCcchhhHHHHHHHHHHHHHcCCcC-eEEEeccHHH
Confidence 999998554 5999999999999865455555 999999999999999999999999999999999985 9999999999
Q ss_pred HHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhc
Q 001059 866 LEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 945 (1170)
Q Consensus 866 l~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~ 945 (1170)
+++++..+++++.++.+++++|.+++... + .++....+++++....+..++. +.|. .+++.+++.
T Consensus 163 f~all~~~~l~~~~~~~L~~a~~~k~~~~------------~-~~~~~~~~~~~~~~~~l~~l~~-l~gg-~e~l~~~~~ 227 (390)
T COG3705 163 FRALLAAAGLPGGWRARLRRAFGDKDLLG------------L-ELLVLAAPLSPELRGRLSELLA-LLGG-REVLERARG 227 (390)
T ss_pred HHHHHHHcCCChhHHHHHHHHHhccchhh------------H-HHHhhccCCChhhhHHHHHHHH-HhCC-HHHHHHHHH
Confidence 99999999999999999999999988432 1 3344446777888888888884 5554 466777776
Q ss_pred cCCCChhHHHHHHHH---HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcc
Q 001059 946 ALPADKPTRKALDEL---YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1022 (1170)
Q Consensus 946 ~~~~~~~~~~~l~~L---~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1022 (1170)
.+........+++++ .-...+...++.+|++++|+++||||++|++|..+.+. ++++|||||+|.+.||
T Consensus 228 ~l~~~~~~~~al~~~~~l~di~~~~~e~i~lDLg~l~~~~YyTg~~F~ay~~~~~~--------al~~GGRYd~l~~~f~ 299 (390)
T COG3705 228 LLDELMAQGIALNEGRALADIARRLIEKIALDLGRLRHFDYYTGLVFLAYADGLGD--------ALASGGRYDGLLGLFG 299 (390)
T ss_pred hhhhhhhhhhhhhhhhhHHHHHhccchhheehhhcccccchhhceeeeeeeccccc--------hhhcccchhhhhhhcC
Confidence 555433333344444 11112233569999999999999999999999887765 7999999999988886
Q ss_pred cccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCC
Q 001059 1023 DREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPD 1102 (1170)
Q Consensus 1023 ~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~ 1102 (1170)
.. .||+||++++++|.+.. .+ ......++.+.... +.....+++++.++|..|-.+.....
T Consensus 300 ~~-----------~patGf~~~l~~l~~~~----~~-~~~~~~~~~f~~~~-~~~~~~~~e~~~~~r~~g~~~~~~l~-- 360 (390)
T COG3705 300 RA-----------APATGFALRLDALAQGG----LP-LEERRYAALFGREL-DYYTGAAFEAAQALRLAGGGRYDRLL-- 360 (390)
T ss_pred cc-----------ccchhhHhhHHHHHhcC----CC-cccchhhhccCccc-hhhHHHHHHHHHHhcccCCeEEEecc--
Confidence 53 39999999999998621 11 12334455555442 33458899999999977655542222
Q ss_pred CCHHHHHHHHHhCCCcEEEEEcCC
Q 001059 1103 PSLTEQYEYASEHDIKCLVILTDT 1126 (1170)
Q Consensus 1103 ~~l~k~~~~A~~~gi~~~iiig~~ 1126 (1170)
...-..+...++.+.+.+...
T Consensus 361 ---~g~~~~~~~~~~~~~~~~~~~ 381 (390)
T COG3705 361 ---TGLGASEEIPGVGFSLWLDRG 381 (390)
T ss_pred ---cccchHhhhcccceeEeeccc
Confidence 122234555677777776544
|
|
| >KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-47 Score=417.35 Aligned_cols=259 Identities=29% Similarity=0.457 Sum_probs=222.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+..+.+++.+..||+|..|+||||+|+.|++.+|+|+|. -+......+++.+|+++++.++|||||.+|++|+..+
T Consensus 74 ~~i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~-~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~-- 150 (364)
T KOG0581|consen 74 NGISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVIL-LNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNG-- 150 (364)
T ss_pred cccCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeec-ccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCC--
Confidence 3456678999999999999999999999999999999995 3455667889999999999999999999999997542
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
. .++|+||||+ |+|.+++...+++++....+++.+|++||.|
T Consensus 151 ------------------------------------~-~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~Y 193 (364)
T KOG0581|consen 151 ------------------------------------E-EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSY 193 (364)
T ss_pred ------------------------------------c-eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 1 5799999997 6999999999999999999999999999999
Q ss_pred HHh-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
||. ++||||||||+|||++..|.|||||||.+..+... ...+++||..|||||.+++ ..|+
T Consensus 194 Lh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS-----------------~a~tfvGT~~YMsPERi~g-~~Ys 255 (364)
T KOG0581|consen 194 LHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS-----------------IANTFVGTSAYMSPERISG-ESYS 255 (364)
T ss_pred HhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-----------------hcccccccccccChhhhcC-CcCC
Confidence 995 99999999999999999999999999999976422 2367899999999999999 6899
Q ss_pred ccchhHHHHHHHHHhhc---CCCch-----hHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTA-----MERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~-----~~~~~~~~~l~~~~~~p~~~~-~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
.++||||||++++||++ ||.+. ..-+.+..+.. ...|..+. ..++++++||..||.+||.+|||+.|++
T Consensus 256 ~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~--~ppP~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl 333 (364)
T KOG0581|consen 256 VKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVD--EPPPRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLL 333 (364)
T ss_pred cccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhc--CCCCCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHh
Confidence 99999999999999996 66653 23333344433 22333333 3788999999999999999999999999
Q ss_pred hccCCCCchH
Q 001059 659 QDALPPQMEY 668 (1170)
Q Consensus 659 ~~~~~~~~~~ 668 (1170)
+|||+.+...
T Consensus 334 ~Hpfi~~~~~ 343 (364)
T KOG0581|consen 334 QHPFIKKFED 343 (364)
T ss_pred cCHHHhhccc
Confidence 9999887654
|
|
| >KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-46 Score=435.39 Aligned_cols=251 Identities=31% Similarity=0.514 Sum_probs=224.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..|+..+.||+|||+.||.+++..+|+.||+|+++.+. ......+++.+||++.++|+|||||+++++|
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F---------- 87 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF---------- 87 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe----------
Confidence 57999999999999999999999999999999998654 2334567899999999999999999999998
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
++..++|||.|+|. ++|..++.+++.++|++|+.|++||+.||.|||++
T Consensus 88 ------------------------------EDs~nVYivLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~ 137 (592)
T KOG0575|consen 88 ------------------------------EDSNNVYIVLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSL 137 (592)
T ss_pred ------------------------------ecCCceEEEEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 34688999999997 69999999999999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
+|||||||..|+|++++.+|||+|||+|+.+..+. -...+.||||.|.|||++.+ ..++..+||
T Consensus 138 ~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~---------------Erk~TlCGTPNYIAPEVl~k-~gHsfEvDi 201 (592)
T KOG0575|consen 138 GIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG---------------ERKKTLCGTPNYIAPEVLNK-SGHSFEVDI 201 (592)
T ss_pred CceecccchhheeecCcCcEEecccceeeeecCcc---------------cccceecCCCcccChhHhcc-CCCCCchhh
Confidence 99999999999999999999999999999876432 12467899999999999997 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
||+|||||-||. ||....-.+....+......+|. ..+.++++||.+||++||.+|||+++||.|+||.
T Consensus 202 WSlGcvmYtLL~G~PPFetk~vkety~~Ik~~~Y~~P~---~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~ 273 (592)
T KOG0575|consen 202 WSLGCVMYTLLVGRPPFETKTVKETYNKIKLNEYSMPS---HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFK 273 (592)
T ss_pred hhhhhHHHhhhhCCCCcccchHHHHHHHHHhcCccccc---ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhh
Confidence 999999999996 88887777777777766666776 5567999999999999999999999999999993
|
|
| >KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-46 Score=411.98 Aligned_cols=261 Identities=31% Similarity=0.461 Sum_probs=228.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|+++++||+|+||+||+++.+.+++.||+|+++++.... ........|..+|..++||+||+++..|
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF-------- 94 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF-------- 94 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec--------
Confidence 3589999999999999999999999999999999998765433 2567789999999999999999999887
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
++...+|+|+||++ |.|..+|++.+.|++..++.|+.+|+.||.|||
T Consensus 95 --------------------------------Qt~~kLylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH 142 (357)
T KOG0598|consen 95 --------------------------------QTEEKLYLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLH 142 (357)
T ss_pred --------------------------------ccCCeEEEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHH
Confidence 35678999999996 599999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|||||||||+|||+|.+|+++|+|||+|+...... ....++|||+.|||||++.+ ..|+.++
T Consensus 143 ~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~---------------~~t~tfcGT~eYmAPEil~~-~gy~~~v 206 (357)
T KOG0598|consen 143 SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDG---------------DATRTFCGTPEYMAPEILLG-KGYDKAV 206 (357)
T ss_pred hCCeeeccCCHHHeeecCCCcEEEeccccchhcccCC---------------CccccccCCccccChHHHhc-CCCCccc
Confidence 9999999999999999999999999999998532111 12345799999999999998 5799999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC----CHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP----ta~eiL~~~~~ 663 (1170)
|+|||||++|||++ ||...+.......++..+...++. ..+++++++++++|+.||.+|. ++.+|-+||||
T Consensus 207 DWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~--~ls~~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF 284 (357)
T KOG0598|consen 207 DWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG--YLSEEARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFF 284 (357)
T ss_pred chHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc--cCCHHHHHHHHHHhccCHHHhcCCCCChHHhhcCccc
Confidence 99999999999997 888887777777777655344443 2456999999999999999995 79999999999
Q ss_pred CCchHHHH
Q 001059 664 PQMEYELL 671 (1170)
Q Consensus 664 ~~~~~~~~ 671 (1170)
..+.|+.+
T Consensus 285 ~~inW~~l 292 (357)
T KOG0598|consen 285 KGINWEKL 292 (357)
T ss_pred ccCCHHHH
Confidence 99998765
|
|
| >cd00773 HisRS-like_core Class II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-45 Score=407.70 Aligned_cols=249 Identities=23% Similarity=0.348 Sum_probs=208.0
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCC---
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQK--- 796 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~--- 796 (1170)
++..++.+++.++++|++|||++|.||+| .+... ++...++||+|.|++|+.++||||+|+|+||+++++..
T Consensus 1 ~~~~~~~l~~~l~~~f~~~Gy~~v~tP~le~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpd~T~~iaR~~a~~~~~~~ 80 (261)
T cd00773 1 EAALRRYIEDTLREVFERYGYEEIDTPVFEYTELFLRKSGDEVSKEMYRFKDKGGRDLALRPDLTAPVARAVAENLLSLP 80 (261)
T ss_pred ChHHHHHHHHHHHHHHHHcCCEEeeccceeeHHHhcccccccccceEEEEECCCCCEEEeCCCCcHHHHHHHHhcCccCC
Confidence 36788999999999999999999999999 33333 56778999999999999999999999999999998654
Q ss_pred CceeEEEecCeEEcCCCC-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCC
Q 001059 797 SSFKRYEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGI 875 (1170)
Q Consensus 797 ~P~r~~Y~g~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl 875 (1170)
.|+|+||+|+|||+++++ ++.+||+|+|+|+||.++..+|+|+|.++.++|+.+|+.+ ++|+|||+++++++++.+++
T Consensus 81 ~p~k~~y~g~vfR~e~~~~g~~re~~Q~g~Eiig~~~~~~daE~i~l~~~~l~~lg~~~-~~i~l~~~~i~~~l~~~~~~ 159 (261)
T cd00773 81 LPLKLYYIGPVFRYERPQKGRYREFYQVGVEIIGSDSPLADAEVIALAVEILEALGLKD-FQIKINHRGILDGIAGLLED 159 (261)
T ss_pred CCeEEEEEcCEEecCCCCCCCccceEEeceeeeCCCChHHHHHHHHHHHHHHHHcCCCc-eEEEECCHHHHHHHhhccCC
Confidence 699999999999998765 4566799999999999999999999999999999999975 99999999999999999999
Q ss_pred CHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHH
Q 001059 876 KAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRK 955 (1170)
Q Consensus 876 ~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~ 955 (1170)
+++.+.++.+.+++ ...+
T Consensus 160 ~~~~~~~l~~~l~~--------------------------------------------------------------~~l~ 177 (261)
T cd00773 160 REEYIERLIDKLDK--------------------------------------------------------------EALA 177 (261)
T ss_pred CHHHHHHHHHHhhH--------------------------------------------------------------HHHH
Confidence 87655544322221 0111
Q ss_pred HHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCC
Q 001059 956 ALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRT 1033 (1170)
Q Consensus 956 ~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~ 1033 (1170)
.|+.+ .++.+|+..+|.||++++|+++||||+||++|..+.+ ...+||+|||||+|+++|++.
T Consensus 178 ~l~~l~~~l~~~~~~~~i~~d~~~~r~~~YYtG~vF~~~~~~~~------~~~~i~~GGRYD~L~~~f~~~--------- 242 (261)
T cd00773 178 HLEKLLDYLEALGVDIKYSIDLSLVRGLDYYTGIVFEAVADGLG------AQGSIAGGGRYDGLLEEFGGE--------- 242 (261)
T ss_pred HHHHHHHHHHHcCCCceEEEcCccccCCcccCceEEEEEECCCC------ccCeEeeccCHHHHHHHhCCC---------
Confidence 12222 4566777678999999999999999999999998641 124799999999999987432
Q ss_pred CCCCceEEeccHHHHHhhc
Q 001059 1034 NPPSGVGASLALETIIQHY 1052 (1170)
Q Consensus 1034 ~~~pAvGfaiglerL~~~L 1052 (1170)
++||||||+++|||+.+|
T Consensus 243 -~~~avGfa~~~d~l~~~~ 260 (261)
T cd00773 243 -DVPAVGFAIGLERLLLAL 260 (261)
T ss_pred -CCCeEEEEEcHHHHHHhh
Confidence 469999999999998775
|
HisRS is a homodimer. It is responsible for the attachment of histidine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ. HisZ along with HisG catalyze the first reaction in histidine biosynthesis. HisZ is found only in a subset of bacteria and differs from HisRS in lacking a C-terminal anti-codon binding domain. |
| >KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=407.12 Aligned_cols=259 Identities=27% Similarity=0.481 Sum_probs=224.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+...+|+..+.||+|+||+||+|+++.++..||||.|.++.-.....+.+..|+.+|+.++|||||++++|+.
T Consensus 7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~------- 79 (429)
T KOG0595|consen 7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIE------- 79 (429)
T ss_pred cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEe-------
Confidence 3467999999999999999999999999999999999877656667778899999999999999999999973
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...++|+|||||. |+|.++++..+.+++..++.++.||+.||++||
T Consensus 80 ---------------------------------~~~~i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~ 126 (429)
T KOG0595|consen 80 ---------------------------------DDDFIYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLH 126 (429)
T ss_pred ---------------------------------cCCeEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3568999999996 799999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCC------CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 511 GQGIIHRDLTPNNIFFDAR------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
+++||||||||+||||+.. -.+||+|||+|+.+.... ...+.||+|.|||||+++. .
T Consensus 127 ~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~----------------~a~tlcGSplYMAPEV~~~-~ 189 (429)
T KOG0595|consen 127 ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGS----------------MAETLCGSPLYMAPEVIMS-Q 189 (429)
T ss_pred HCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchh----------------HHHHhhCCccccCHHHHHh-c
Confidence 9999999999999999875 459999999999875332 1245799999999999986 6
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
+|+.|+|+||+|+|+|+|++ ||......+....+.......|......++...+|+...++.+|..|-++.+-+.|+
T Consensus 190 ~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k~~~~~~~~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~ 269 (429)
T KOG0595|consen 190 QYDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKKGNEIVPVLPAELSNPLRELLISLLQRNPKDRISFEDFFDHP 269 (429)
T ss_pred cccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhccccccCchhhhccCchhhhhhHHHhcCccccCchHHhhhhh
Confidence 89999999999999999997 887777777766555444445544444555677999999999999999999999998
Q ss_pred CCCCch
Q 001059 662 LPPQME 667 (1170)
Q Consensus 662 ~~~~~~ 667 (1170)
+.....
T Consensus 270 ~l~~~p 275 (429)
T KOG0595|consen 270 FLAANP 275 (429)
T ss_pred hcccCc
Confidence 766554
|
|
| >KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-45 Score=417.45 Aligned_cols=274 Identities=30% Similarity=0.517 Sum_probs=238.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
.+..+||.+.+.||.|+|++|++|+.+.+++.||||++.++.... .....+.+|-.+|.+| .||.|+++|..|
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TF----- 143 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTF----- 143 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEe-----
Confidence 344689999999999999999999999999999999997654321 2234577899999999 899999999887
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
++...+|+|+||++ |+|.+++.+.+.|++..++.|+.||+.||+
T Consensus 144 -----------------------------------QD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAle 188 (604)
T KOG0592|consen 144 -----------------------------------QDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALE 188 (604)
T ss_pred -----------------------------------ecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHH
Confidence 34678999999997 799999999999999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|||||||||+|||+|.|+++||+|||.|+.+......+.. +........+..+++||..|.+||+|.. ...+
T Consensus 189 ylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~--~~~~~~a~s~~~SFVGTAeYVSPElL~~-~~~~ 265 (604)
T KOG0592|consen 189 YLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQEN--PVDPNQASSRRSSFVGTAEYVSPELLND-SPAG 265 (604)
T ss_pred HHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccC--ccCcccccCcccceeeeecccCHHHhcC-CCCC
Confidence 999999999999999999999999999999999998765543321 1111111222477999999999999998 6789
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
+.+|+|+||||||+|+. ||....+--.+.+++.....+|+.++ +.+.+||+++|..||++|+|+.+|.+||||.
T Consensus 266 ~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~~fp---~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~ 342 (604)
T KOG0592|consen 266 PSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPEGFP---EDARDLIKKLLVRDPSDRLTSQQIKAHPFFE 342 (604)
T ss_pred cccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCCCCC---HHHHHHHHHHHccCccccccHHHHhhCcccc
Confidence 99999999999999996 99999998888888888888888665 6899999999999999999999999999999
Q ss_pred CchHHH
Q 001059 665 QMEYEL 670 (1170)
Q Consensus 665 ~~~~~~ 670 (1170)
...|+.
T Consensus 343 ~Vdw~n 348 (604)
T KOG0592|consen 343 GVDWEN 348 (604)
T ss_pred cCChhh
Confidence 999876
|
|
| >KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-46 Score=394.31 Aligned_cols=250 Identities=30% Similarity=0.560 Sum_probs=211.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEE-EEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ-AWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~-~~~e~~~~~~~ 432 (1170)
+.+|+++++||+|+||+||++.+..+|..+|.|.++....+....+....|+.+|++|+|||||++++ .|.+
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~------- 90 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIE------- 90 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhc-------
Confidence 57899999999999999999999999999999999877777777889999999999999999999986 3311
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
+..-++|+||||+ |+|.+.+.. ...+++..+|+++.|++.||.
T Consensus 91 --------------------------------~~evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~ 138 (375)
T KOG0591|consen 91 --------------------------------DNEVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALY 138 (375)
T ss_pred --------------------------------cchhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHH
Confidence 2344899999996 799998853 345999999999999999999
Q ss_pred HHHh--CC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 508 HIHG--QG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 508 yLHs--~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
++|+ .. |+||||||.||+|+.+|.+||+|||+++++.... ....+.+|||.||+||.+.+
T Consensus 139 ~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~---------------tfA~S~VGTPyYMSPE~i~~- 202 (375)
T KOG0591|consen 139 HCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT---------------TFAHSLVGTPYYMSPERIHE- 202 (375)
T ss_pred HHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh---------------HHHHhhcCCCcccCHHHHhc-
Confidence 9999 45 9999999999999999999999999999875432 12357899999999999998
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..|++++||||+||++|||+. ||.+..-.+...++ ..+..|+.+ ...+.++..||..|+..||..||+.-.+++
T Consensus 203 ~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI--~qgd~~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~ 280 (375)
T KOG0591|consen 203 SGYNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKI--EQGDYPPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQ 280 (375)
T ss_pred CCCCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHH--HcCCCCCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHH
Confidence 679999999999999999974 99887444333333 255676665 556678999999999999999999755554
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
.
T Consensus 281 d 281 (375)
T KOG0591|consen 281 D 281 (375)
T ss_pred H
Confidence 3
|
|
| >KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-45 Score=387.35 Aligned_cols=257 Identities=30% Similarity=0.477 Sum_probs=231.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+++|+.++.||.|+||.|.+++++.+|..||+|++++... .....+...+|..+|+.+.||+++++++.|.
T Consensus 42 ~l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~------- 114 (355)
T KOG0616|consen 42 SLQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFK------- 114 (355)
T ss_pred chhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeec-------
Confidence 46899999999999999999999999999999999986542 3345567889999999999999999998873
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+..++|+||||++ |.|..++++.++|+++.++.|+.||+.||+|||
T Consensus 115 ---------------------------------d~~~lymvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH 161 (355)
T KOG0616|consen 115 ---------------------------------DNSNLYMVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLH 161 (355)
T ss_pred ---------------------------------cCCeEEEEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 4578999999997 589999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++|++|||||+|||||.+|++||+|||+|+.+... .-+.||||.|+|||+++. ..|+.++
T Consensus 162 ~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r------------------T~TlCGTPeYLAPEii~s-k~ynkav 222 (355)
T KOG0616|consen 162 SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR------------------TWTLCGTPEYLAPEIIQS-KGYNKAV 222 (355)
T ss_pred hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc------------------EEEecCCccccChHHhhc-CCCCcch
Confidence 999999999999999999999999999999976421 245699999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC-----CCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR-----PSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R-----Pta~eiL~~~~ 662 (1170)
|+|||||++|||+. ||....+..+..+++..+..+|+.+ ++++++||+++|+.|-.+| ....+|..|+|
T Consensus 223 DWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~~f---s~~~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~w 299 (355)
T KOG0616|consen 223 DWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPSYF---SSDAKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPW 299 (355)
T ss_pred hHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCccc---CHHHHHHHHHHHhhhhHhhhcCcCCCccccccCcc
Confidence 99999999999995 9999999999999999888888765 4599999999999999999 46789999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
|....|..+
T Consensus 300 F~~v~W~~i 308 (355)
T KOG0616|consen 300 FKGVDWEAI 308 (355)
T ss_pred cccccHHHH
Confidence 999987654
|
|
| >KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-44 Score=410.55 Aligned_cols=278 Identities=28% Similarity=0.480 Sum_probs=229.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.++||+++++||+|+||.||+|+.+.||..||+|++++... .......+.-|-.+|....+|+||++|.+|
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF-------- 210 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF-------- 210 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--------
Confidence 46899999999999999999999999999999999986652 333456788899999999999999999888
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
++..++|+||||+| |++..+|...+.+++..++.|+.+++.|+.-||
T Consensus 211 --------------------------------QD~~~LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH 258 (550)
T KOG0605|consen 211 --------------------------------QDKEYLYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIH 258 (550)
T ss_pred --------------------------------cCCCeeEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHH
Confidence 45689999999997 599999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccC------------CCCCCCCCC---cc-------------
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD------------AAFPTDTGG---VS------------- 562 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~------------~~~~~~~~~---~~------------- 562 (1170)
+.|+|||||||+|+|||..||+||+|||+|+-+........ ...+.+... ..
T Consensus 259 ~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 338 (550)
T KOG0605|consen 259 QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWK 338 (550)
T ss_pred HcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHH
Confidence 99999999999999999999999999999975543211110 000111110 00
Q ss_pred ----ccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCC
Q 001059 563 ----VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKF 633 (1170)
Q Consensus 563 ----~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~ 633 (1170)
.-..+.+|||.|||||++.+ ..|+..||+||||||+||||. ||....+.+...+++.-. ..+|.. ...+
T Consensus 339 ~nrr~~a~StVGTPDYiAPEVll~-kgY~~~cDwWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~-~~~s 416 (550)
T KOG0605|consen 339 RNRRQLAYSTVGTPDYIAPEVLLG-KGYGKECDWWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEE-VDLS 416 (550)
T ss_pred hhhhhhhhcccCCccccchHHHhc-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCc-Cccc
Confidence 01235699999999999999 459999999999999999995 899888888777665533 334443 3456
Q ss_pred HHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCchHHHHHH
Q 001059 634 SEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYELLDN 673 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~ 673 (1170)
+++.+||.+||+ ||.+|. +++||.+||||....|+.+..
T Consensus 417 ~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~~v~W~~l~~ 458 (550)
T KOG0605|consen 417 DEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFKGVDWDHLRE 458 (550)
T ss_pred HHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccccCCcchhhc
Confidence 899999999999 999998 599999999999999987654
|
|
| >KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-45 Score=388.72 Aligned_cols=258 Identities=28% Similarity=0.466 Sum_probs=214.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++.|+.+.++|+|+||+||+|+++.||+.||||++.-.+.+....+-.+||+.+|++++|||+|.++++|
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF---------- 70 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF---------- 70 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH----------
Confidence 4678999999999999999999999999999999987777777778889999999999999999999877
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.....+++|+|||+.++.+.|... ..++...+.++++|++.|+.|+|++
T Consensus 71 ------------------------------rrkrklhLVFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~ 120 (396)
T KOG0593|consen 71 ------------------------------RRKRKLHLVFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKN 120 (396)
T ss_pred ------------------------------HhcceeEEEeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhc
Confidence 235789999999999888777765 4699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
++|||||||+||||+.+|.+||||||+|+.+..+. ..-|.++.|.||.|||.+.|..+|+..+||
T Consensus 121 n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg---------------d~YTDYVATRWYRaPELLvGDtqYG~pVDi 185 (396)
T KOG0593|consen 121 NCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG---------------DNYTDYVATRWYRAPELLVGDTQYGKPVDI 185 (396)
T ss_pred CeecccCChhheEEecCCcEEeccchhhHhhcCCc---------------chhhhhhhhhhccChhhhcccCcCCCcccc
Confidence 99999999999999999999999999999875321 113567999999999999998889999999
Q ss_pred HHHHHHHHHhhc--CCCchh-HHHHHHHHhhhcCC-------------------CC---------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH--PFSTAM-ERQIVLSDLKQKGE-------------------LP---------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt--Pf~~~~-~~~~~~~~l~~~~~-------------------~p---------~~~~~~~~e~~~LI~ 641 (1170)
||+||++.||++ |.++.. +-.....+...-+. +| ...+..+.-+.+|++
T Consensus 186 WAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k 265 (396)
T KOG0593|consen 186 WAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLK 265 (396)
T ss_pred hhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHH
Confidence 999999999998 655443 32222222111111 11 012233445679999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCc
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.||..||++|++.+++|.|++|...
T Consensus 266 ~cL~~dP~~R~sc~qll~H~yFd~~ 290 (396)
T KOG0593|consen 266 KCLKMDPDDRLSCEQLLHHPYFDGF 290 (396)
T ss_pred HHhcCCccccccHHHHhcChHHHHH
Confidence 9999999999999999999999443
|
|
| >KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-45 Score=406.81 Aligned_cols=262 Identities=31% Similarity=0.464 Sum_probs=216.5
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~ 428 (1170)
...++++|.++++||.|+||.||+|+.+.+|..||||.++.+..+.+.. .-+||+..|++|+ |||||++++.+.++
T Consensus 5 ~~~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~-~nLREvksL~kln~hpniikL~Evi~d~-- 81 (538)
T KOG0661|consen 5 QVIFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEEC-MNLREVKSLRKLNPHPNIIKLKEVIRDN-- 81 (538)
T ss_pred ehhHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHH-HHHHHHHHHHhcCCCCcchhhHHHhhcc--
Confidence 3456789999999999999999999999999999999998777664433 3468999999998 99999999887543
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||||+.+|++++..++ .|+++.++.|++||++||+
T Consensus 82 -------------------------------------~~~L~fVfE~Md~NLYqLmK~R~r~fse~~irnim~QilqGL~ 124 (538)
T KOG0661|consen 82 -------------------------------------DRILYFVFEFMDCNLYQLMKDRNRLFSESDIRNIMYQILQGLA 124 (538)
T ss_pred -------------------------------------CceEeeeHHhhhhhHHHHHhhcCCcCCHHHHHHHHHHHHHHHH
Confidence 23899999999999999997654 5999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|+|.+|+.||||||+|||+.....+||+|||+|+.+... ..-|.++.|.||.|||+|.....|+
T Consensus 125 hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~Sk----------------pPYTeYVSTRWYRAPEvLLrs~~Ys 188 (538)
T KOG0661|consen 125 HIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSK----------------PPYTEYVSTRWYRAPEVLLRSGYYS 188 (538)
T ss_pred HHHhcCcccccCChhheEecccceeEecccccccccccC----------------CCcchhhhcccccchHHhhhccccC
Confidence 999999999999999999999999999999999975321 1236789999999999998878899
Q ss_pred ccchhHHHHHHHHHhhc--CCC-chhHHHHHHHHhhh-------------------cCCCC--------CccccCCHHHH
Q 001059 588 EKADMYSLGIVFFELWH--PFS-TAMERQIVLSDLKQ-------------------KGELP--------PSWVAKFSEQE 637 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt--Pf~-~~~~~~~~~~~l~~-------------------~~~~p--------~~~~~~~~e~~ 637 (1170)
.+.|||++|||++|+++ |.. +.++.....++..- +..+| .-.+..++++.
T Consensus 189 ~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~ 268 (538)
T KOG0661|consen 189 SPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAA 268 (538)
T ss_pred CchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHH
Confidence 99999999999999975 533 33333332222110 11122 12334667899
Q ss_pred HHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 638 SLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
++|.+||..||.+||||.++|+||||+...
T Consensus 269 ~li~~ll~WDP~kRpTA~~al~~pffq~~~ 298 (538)
T KOG0661|consen 269 SLIERLLAWDPDKRPTASQALQHPFFQVGR 298 (538)
T ss_pred HHHHHHhcCCCccCccHHHHhcCccccccc
Confidence 999999999999999999999999998653
|
|
| >KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-43 Score=399.90 Aligned_cols=266 Identities=27% Similarity=0.425 Sum_probs=222.0
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
...+..+.|+.+++||+|.||.||+|++..+|+.||+|+++.............|||.+|++|+||||+++.+...+.
T Consensus 111 w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~-- 188 (560)
T KOG0600|consen 111 WGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSK-- 188 (560)
T ss_pred ccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEec--
Confidence 345567899999999999999999999999999999999988776666667889999999999999999999886542
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+|+|||+.+|..++... -.|++++++.|+.||+.||+
T Consensus 189 ------------------------------------~~~siYlVFeYMdhDL~GLl~~p~vkft~~qIKc~mkQLl~Gl~ 232 (560)
T KOG0600|consen 189 ------------------------------------LSGSIYLVFEYMDHDLSGLLSSPGVKFTEPQIKCYMKQLLEGLE 232 (560)
T ss_pred ------------------------------------CCceEEEEEecccchhhhhhcCCCcccChHHHHHHHHHHHHHHH
Confidence 24578999999999999998864 47999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+|||||.+|||||.+|.+||+|||+|+++.... ....|+.+-|.||.|||.|.|...|+
T Consensus 233 ~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~--------------~~~~T~rVvTLWYRpPELLLG~t~Yg 298 (560)
T KOG0600|consen 233 YCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSG--------------SAPYTSRVVTLWYRPPELLLGATSYG 298 (560)
T ss_pred HHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCC--------------CcccccceEEeeccChHHhcCCcccc
Confidence 9999999999999999999999999999999999875332 12357889999999999999988999
Q ss_pred ccchhHHHHHHHHHhhc--CC-CchhHHHHHHHHhhhcCCCCC-c-------------------------cccCCHHHHH
Q 001059 588 EKADMYSLGIVFFELWH--PF-STAMERQIVLSDLKQKGELPP-S-------------------------WVAKFSEQES 638 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt--Pf-~~~~~~~~~~~~l~~~~~~p~-~-------------------------~~~~~~e~~~ 638 (1170)
.++|+||.||||.||+. |. .+..+.+.+-.+...-+.... . +...++.+.+
T Consensus 299 ~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~ 378 (560)
T KOG0600|consen 299 TAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALD 378 (560)
T ss_pred cceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHH
Confidence 99999999999999996 44 444444444444333222111 1 1123446679
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|+..||+.||.+|.||.++|++.||...
T Consensus 379 Ll~~lL~ldP~kR~tA~~aL~seyF~t~ 406 (560)
T KOG0600|consen 379 LLEKLLSLDPDKRGTASSALQSEYFTTE 406 (560)
T ss_pred HHHHHhccCccccccHHHHhcCcccccC
Confidence 9999999999999999999999999544
|
|
| >KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-42 Score=385.50 Aligned_cols=264 Identities=27% Similarity=0.384 Sum_probs=224.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++..+||.|..++||+|++..++..||||+++...+... .+.+.+|+..|+.++||||++++.+|..
T Consensus 24 n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sFvv------- 95 (516)
T KOG0582|consen 24 NAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSFVV------- 95 (516)
T ss_pred CccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEEEe-------
Confidence 46899999999999999999999999999999999998877654 6789999999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+||.||. ||+.+++... ..++|..+..+++++++||.||
T Consensus 96 ---------------------------------~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YL 142 (516)
T KOG0582|consen 96 ---------------------------------DSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYL 142 (516)
T ss_pred ---------------------------------cceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHH
Confidence 467899999996 7999998754 4599999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc-ccCCCCCCc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDE 588 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~-l~~~~~~~~ 588 (1170)
|.+|.||||||+.||||+.+|.|||+|||.+..+.... . . ...+...++|||+|||||+ .+....|+.
T Consensus 143 H~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G-~--------R--~~~rf~tfvgtp~wmAPEvl~q~~~GYdf 211 (516)
T KOG0582|consen 143 HQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG-D--------R--QVTRFNTFVGTPCWMAPEVLMQQLHGYDF 211 (516)
T ss_pred HhcCceecccccccEEEcCCCcEEEcCceeeeeecccC-c--------e--eeEeeccccCcccccChHHhhhcccCccc
Confidence 99999999999999999999999999999998764322 0 0 0111167799999999999 454456999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-------ccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-------SWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
|+|||||||+..||.+ ||....++..++..+...+..+. .....+..++.+|..||.+||.+|||++++|
T Consensus 212 KaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLl 291 (516)
T KOG0582|consen 212 KADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLL 291 (516)
T ss_pred hhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHh
Confidence 9999999999999997 99988888888877764433211 1122334678999999999999999999999
Q ss_pred hccCCCCchH
Q 001059 659 QDALPPQMEY 668 (1170)
Q Consensus 659 ~~~~~~~~~~ 668 (1170)
+|+||++...
T Consensus 292 kh~FFk~~k~ 301 (516)
T KOG0582|consen 292 KHAFFKKAKS 301 (516)
T ss_pred ccHHHhhccc
Confidence 9999998753
|
|
| >KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-43 Score=366.54 Aligned_cols=258 Identities=28% Similarity=0.464 Sum_probs=216.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|...++||+|.||.||+|++..||+.||||+|+..+.........+||++.|+.++||||+.++++|-
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~---------- 71 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFP---------- 71 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhcc----------
Confidence 4678889999999999999999999999999999988776667788999999999999999999999882
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+.+|+||++.+|..++.... .++..+++.|+.++++||+|||++.
T Consensus 72 ------------------------------~~~~l~lVfEfm~tdLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~ 121 (318)
T KOG0659|consen 72 ------------------------------HKSNLSLVFEFMPTDLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKW 121 (318)
T ss_pred ------------------------------CCCceEEEEEeccccHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhh
Confidence 245688999999999999997544 5999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||.|+||+.+|.+||+|||+|+.+..+.. ..+..+-|.+|.|||.+-|...|+..+|||
T Consensus 122 IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~---------------~~~~~V~TRWYRAPELLfGsr~Yg~~VDmW 186 (318)
T KOG0659|consen 122 ILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR---------------IQTHQVVTRWYRAPELLFGSRQYGTGVDMW 186 (318)
T ss_pred hhcccCCccceEEcCCCcEEeecccchhccCCCCc---------------ccccceeeeeccChHHhccchhcCCcchhh
Confidence 99999999999999999999999999998754331 123348899999999999988999999999
Q ss_pred HHHHHHHHhhc--CCCchhH-HHHHHHHhhhcCC--------------------CC-----CccccCCHHHHHHHHHccC
Q 001059 594 SLGIVFFELWH--PFSTAME-RQIVLSDLKQKGE--------------------LP-----PSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 594 SlGviL~ELlt--Pf~~~~~-~~~~~~~l~~~~~--------------------~p-----~~~~~~~~e~~~LI~~~L~ 645 (1170)
|.|||+.||+. ||.+... -+..-.+.+.-+. .| ..++..++++.+|+.+||.
T Consensus 187 avGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ 266 (318)
T KOG0659|consen 187 AVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLT 266 (318)
T ss_pred hHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhc
Confidence 99999999985 7765543 2332222221111 11 1233445677899999999
Q ss_pred CCCCCCCCHHHHHhccCCCCch
Q 001059 646 PSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.||.+|+|+.|+|+|+||.+..
T Consensus 267 ynP~~Rita~qaL~~~yf~~~P 288 (318)
T KOG0659|consen 267 YNPKKRITASQALKHPYFKSLP 288 (318)
T ss_pred cCchhcccHHHHhcchhhhcCC
Confidence 9999999999999999888754
|
|
| >KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=398.70 Aligned_cols=254 Identities=27% Similarity=0.420 Sum_probs=223.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|.+.+.||+|+||.||||+.+.|.+.||+|.+.+..........+.+|+.+++.++|||||.+++.|
T Consensus 1 me~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf---------- 70 (808)
T KOG0597|consen 1 MEQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF---------- 70 (808)
T ss_pred CcchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh----------
Confidence 4689999999999999999999999999999999987777766778899999999999999999999776
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
+....+|+|+|||.|+|..++...+.++++.+..++.|++.||.|||+++
T Consensus 71 ------------------------------Et~~~~~vVte~a~g~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~r 120 (808)
T KOG0597|consen 71 ------------------------------ETSAHLWVVTEYAVGDLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNR 120 (808)
T ss_pred ------------------------------cccceEEEEehhhhhhHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence 23678999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+|||+||.|||++..+++|+||||+|+..... ....++..|||.|||||++.+ ..|+..+|+|
T Consensus 121 ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~---------------t~vltsikGtPlYmAPElv~e-~pyd~~sDlW 184 (808)
T KOG0597|consen 121 ILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN---------------TSVLTSIKGTPLYMAPELVEE-QPYDHTSDLW 184 (808)
T ss_pred cccccCCcceeeecCCCceeechhhhhhhcccC---------------ceeeeeccCcccccCHHHHcC-CCccchhhHH
Confidence 999999999999999999999999999975322 122356689999999999997 6799999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|+|||+|||++ ||....-.+....++......|+ ..++.+.+|++.+|.+||.+|.|..+++.|||.+..
T Consensus 185 slGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~---~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~ 257 (808)
T KOG0597|consen 185 SLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS---TASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGK 257 (808)
T ss_pred HHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc---cccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhh
Confidence 99999999996 88776666666555543333333 667899999999999999999999999999986654
|
|
| >KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-42 Score=399.91 Aligned_cols=256 Identities=30% Similarity=0.518 Sum_probs=219.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~ 427 (1170)
...+.|.+.+.||+|+||+|++|.+..+|..||||+++..... ....+.+.+|+.+++.++ ||||+++++++.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~--- 90 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFA--- 90 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEe---
Confidence 3457899999999999999999999999999999987654211 134566779999999998 999999998872
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
....+|+|||||. |+|.+.+...+++.+.++++++.||++|+
T Consensus 91 -------------------------------------t~~~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav 133 (370)
T KOG0583|consen 91 -------------------------------------TPTKIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAV 133 (370)
T ss_pred -------------------------------------cCCeEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHH
Confidence 2455999999997 59999999989999999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCC-CCEEEeecCcchhcc-ccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLK-LEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
+|||++||+||||||+|||++.+ +++||+|||++.... .. ....+.+||+.|+|||++.+..
T Consensus 134 ~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~----------------~~l~t~cGsp~Y~aPEvl~~~~ 197 (370)
T KOG0583|consen 134 AYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGED----------------GLLKTFCGSPAYAAPEVLSGKG 197 (370)
T ss_pred HHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCC----------------CcccCCCCCcccCCHHHhCCCC
Confidence 99999999999999999999999 999999999998752 11 1235679999999999999965
Q ss_pred -CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 -KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 -~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.-+.++||||+||+||.|++ ||...........+......+|.... ++++++|+++||..||.+|+|+.+|+.|
T Consensus 198 ~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~~~~--S~~~~~Li~~mL~~~P~~R~t~~~i~~h 275 (370)
T KOG0583|consen 198 TYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPSYLL--SPEARSLIEKMLVPDPSTRITLLEILEH 275 (370)
T ss_pred CcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCCCcC--CHHHHHHHHHHcCCCcccCCCHHHHhhC
Confidence 34589999999999999997 88886666666665555555665543 7899999999999999999999999999
Q ss_pred cCCCC
Q 001059 661 ALPPQ 665 (1170)
Q Consensus 661 ~~~~~ 665 (1170)
+||+.
T Consensus 276 ~w~~~ 280 (370)
T KOG0583|consen 276 PWFQK 280 (370)
T ss_pred hhhcc
Confidence 99997
|
|
| >KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-42 Score=403.77 Aligned_cols=287 Identities=26% Similarity=0.377 Sum_probs=236.2
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
...+++|.++++||+|+||+|+++..+.+++.||||++++... .....+....|..++... +||.+++++++|
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f----- 438 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF----- 438 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc-----
Confidence 4568999999999999999999999999999999999987653 334567788898888888 599999999888
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...++|+||||+.|+-..++...+.|+++.++.|+..|+.||+|
T Consensus 439 -----------------------------------QT~~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~f 483 (694)
T KOG0694|consen 439 -----------------------------------QTKEHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQF 483 (694)
T ss_pred -----------------------------------ccCCeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHH
Confidence 357899999999975334444556789999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||||||||.+|||+|.+|++||+|||+++..-.. ....+++||||.|||||++++ ..|+.
T Consensus 484 LH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~---------------g~~TsTfCGTpey~aPEil~e-~~Yt~ 547 (694)
T KOG0694|consen 484 LHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ---------------GDRTSTFCGTPEFLAPEVLTE-QSYTR 547 (694)
T ss_pred HHhcCceeeecchhheEEcccCcEEecccccccccCCC---------------CCccccccCChhhcChhhhcc-Ccccc
Confidence 99999999999999999999999999999999853100 113567899999999999998 78999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 660 (1170)
++|+|||||+||||+. ||.+.++.+..-.++......|.. .+.++.++|+++|.++|++|.. +++|.+|
T Consensus 548 aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~~---ls~ea~~il~~ll~k~p~kRLG~~e~d~~~i~~h 624 (694)
T KOG0694|consen 548 AVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPRF---LSKEAIAIMRRLLRKNPEKRLGSGERDAEDIKKH 624 (694)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCCc---ccHHHHHHHHHHhccCcccccCCCCCCchhhhhC
Confidence 9999999999999995 999999999988888766666654 3459999999999999999985 6899999
Q ss_pred cCCCCchHHHHHHHHHhcCCCCCccchhhhhcccccch
Q 001059 661 ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE 698 (1170)
Q Consensus 661 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~ 698 (1170)
|||....|+.+ ..+.+.+|-...+..+.--+-|+++
T Consensus 625 pFFr~i~w~~L--~~r~i~PPf~P~i~~~~D~snFd~e 660 (694)
T KOG0694|consen 625 PFFRSIDWDDL--LNRRIKPPFVPTIKGPEDVSNFDEE 660 (694)
T ss_pred CccccCCHHHH--hhccCCCCCCcccCChhhhcccchh
Confidence 99999997755 3334444433333333333334444
|
|
| >KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-42 Score=398.77 Aligned_cols=256 Identities=31% Similarity=0.508 Sum_probs=228.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC-CCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK-DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~-~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+..-|++.+.||+|+-|.|.+|+|..||+.+|||+|... ..+......+.+|+-+|+-+.||||+++|++|.
T Consensus 10 tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe------- 82 (786)
T KOG0588|consen 10 TIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWE------- 82 (786)
T ss_pred cccceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeec-------
Confidence 456789999999999999999999999999999999876 344445567899999999999999999999993
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+..++|+|.||++ |.|.+++...+++++.++.+++.||+.|+.|||
T Consensus 83 ---------------------------------~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH 129 (786)
T KOG0588|consen 83 ---------------------------------NKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCH 129 (786)
T ss_pred ---------------------------------cCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 3578999999996 689999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
..+|+||||||+|+|+|..+++||+|||+|..-..+. ...+.||+|.|+|||++.|.++.+.++
T Consensus 130 ~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk----------------lLeTSCGSPHYA~PEIV~G~pYdG~~s 193 (786)
T KOG0588|consen 130 AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK----------------LLETSCGSPHYAAPEIVSGRPYDGRPS 193 (786)
T ss_pred hhcceeccCCchhhhhhcccCEeeeccceeecccCCc----------------cccccCCCcccCCchhhcCCCCCCCcc
Confidence 9999999999999999999999999999998643221 124569999999999999988788999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||+|||||.||+ ||.+.+-+..+.+...+...+|. .+++++++||++||..||.+|.|.++|++|||.....
T Consensus 194 DVWSCGVILfALLtG~LPFdDdNir~LLlKV~~G~f~MPs---~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~ 270 (786)
T KOG0588|consen 194 DVWSCGVILFALLTGKLPFDDDNIRVLLLKVQRGVFEMPS---NISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYT 270 (786)
T ss_pred ccchhHHHHHHHHhCCCCCCCccHHHHHHHHHcCcccCCC---cCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCC
Confidence 99999999999998 99988888888888777777774 5678999999999999999999999999999976654
|
|
| >KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-42 Score=371.00 Aligned_cols=267 Identities=27% Similarity=0.395 Sum_probs=218.9
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
+...+.+++|+.+..|++|+||.||+|+++.|++.||+|.++........--.-+||+.+|.+++|||||.+-.+.+-
T Consensus 69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG-- 146 (419)
T KOG0663|consen 69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVG-- 146 (419)
T ss_pred ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEec--
Confidence 556777899999999999999999999999999999999998765443334467899999999999999999876521
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL 506 (1170)
.....+|||||||..+|..++.... +|...+++.++.|+++|+
T Consensus 147 ------------------------------------~~~d~iy~VMe~~EhDLksl~d~m~q~F~~~evK~L~~QlL~gl 190 (419)
T KOG0663|consen 147 ------------------------------------SNMDKIYIVMEYVEHDLKSLMETMKQPFLPGEVKTLMLQLLRGL 190 (419)
T ss_pred ------------------------------------cccceeeeeHHHHHhhHHHHHHhccCCCchHHHHHHHHHHHHHH
Confidence 1245689999999999999998765 799999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++.|+||||||+|+|++..|.+||+|||+|+.+..+. -..|..+-|.+|.|||.+.|...|
T Consensus 191 k~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~---------------k~~T~lVVTLWYRaPELLLG~~ty 255 (419)
T KOG0663|consen 191 KHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPL---------------KPYTPLVVTLWYRAPELLLGAKTY 255 (419)
T ss_pred HHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCc---------------ccCcceEEEeeecCHHHhcCCccc
Confidence 99999999999999999999999999999999999875432 123667899999999999998899
Q ss_pred CccchhHHHHHHHHHhhc--CC-CchhHHHHHHHHhhhcCC-------------------CCCc--------ccc--CCH
Q 001059 587 DEKADMYSLGIVFFELWH--PF-STAMERQIVLSDLKQKGE-------------------LPPS--------WVA--KFS 634 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt--Pf-~~~~~~~~~~~~l~~~~~-------------------~p~~--------~~~--~~~ 634 (1170)
+.+.||||+|||+.||++ |. .+..+......+...-+. ++.. +.. .+.
T Consensus 256 st~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse 335 (419)
T KOG0663|consen 256 STAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSE 335 (419)
T ss_pred CcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccch
Confidence 999999999999999996 53 344444433333322111 1110 001 224
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 635 EQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 635 e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...+|+..+|..||.+|.||++.|+|.||....
T Consensus 336 ~g~~Lln~llt~dP~kR~tA~~~L~h~~F~e~P 368 (419)
T KOG0663|consen 336 QGFDLLNKLLTYDPGKRITAEDGLKHEYFRETP 368 (419)
T ss_pred hHHHHHHHHhccCccccccHHHhhcccccccCC
Confidence 557999999999999999999999999998865
|
|
| >KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=392.93 Aligned_cols=249 Identities=33% Similarity=0.482 Sum_probs=210.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE-EEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH-YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~-vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++.+.+.||.|+||+||+|.|+ |+. ||||++.....+......|.+|+.+|++++|||||+++|+|.++
T Consensus 40 ~~~l~~~~~iG~G~~g~V~~~~~~--g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~------ 111 (362)
T KOG0192|consen 40 PDELPIEEVLGSGSFGTVYKGKWR--GTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSP------ 111 (362)
T ss_pred hHHhhhhhhcccCCceeEEEEEeC--CceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCC------
Confidence 345666677999999999999998 777 99999987665545577899999999999999999999998442
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...++|||||++ |+|.++++. ...++...+..++.||++||.||
T Consensus 112 ---------------------------------~~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YL 158 (362)
T KOG0192|consen 112 ---------------------------------PGSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYL 158 (362)
T ss_pred ---------------------------------CCceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHH
Confidence 115799999997 699999987 56799999999999999999999
Q ss_pred HhCC-ccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-CCCC
Q 001059 510 HGQG-IIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-WPKI 586 (1170)
Q Consensus 510 Hs~g-IiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-~~~~ 586 (1170)
|+++ ||||||||+|||++.++ ++||+|||+++...... ...+...||+.|||||++.+ ...|
T Consensus 159 H~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~---------------~~~~~~~GT~~wMAPEv~~~~~~~~ 223 (362)
T KOG0192|consen 159 HSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK---------------TSMTSVAGTYRWMAPEVLRGEKSPY 223 (362)
T ss_pred hcCCCeeecccChhhEEEcCCCCEEEECCCccceeecccc---------------ccccCCCCCccccChhhhcCCCCcC
Confidence 9999 99999999999999997 99999999998653211 12344689999999999995 2579
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+.|+|||||||+||||+| ||......+...... .....|+....+++.+..||.+||+.||.+||++.+|+.
T Consensus 224 ~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~-~~~~Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~ 298 (362)
T KOG0192|consen 224 TEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVV-VGGLRPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVS 298 (362)
T ss_pred CccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHH-hcCCCCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHH
Confidence 999999999999999997 999888744444433 355556555558889999999999999999999999986
|
|
| >KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-42 Score=377.06 Aligned_cols=275 Identities=26% Similarity=0.403 Sum_probs=223.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|..++.||+|+||.|+.|.++.+|+.||||++..........++..||+++|+.++|+||+.+++.+..+
T Consensus 23 ~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~--------- 93 (359)
T KOG0660|consen 23 YYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPP--------- 93 (359)
T ss_pred eecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccc---------
Confidence 45557899999999999999999999999999986666667788999999999999999999999876221
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
....-..+|+|+|+|+.+|.++++..+.+++..+..+++||++||+|+||.||+
T Consensus 94 --------------------------~~~~f~DvYiV~elMetDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnVi 147 (359)
T KOG0660|consen 94 --------------------------SRDKFNDVYLVFELMETDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVI 147 (359)
T ss_pred --------------------------cccccceeEEehhHHhhHHHHHHHcCccccHHHHHHHHHHHHHhcchhhccccc
Confidence 112346789999999999999999988899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|+|++.++.+||||||+|+..... ......|.++-|.+|.|||++.....|+.+.||||+
T Consensus 148 HRDLKPsNll~n~~c~lKI~DFGLAR~~~~~-------------~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSv 214 (359)
T KOG0660|consen 148 HRDLKPSNLLLNADCDLKICDFGLARYLDKF-------------FEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSV 214 (359)
T ss_pred ccccchhheeeccCCCEEeccccceeecccc-------------CcccchhcceeeeeecCHHHHhccccccchhhhhhh
Confidence 9999999999999999999999999976422 112235788999999999999888889999999999
Q ss_pred HHHHHHhhc--CCCchhH-HH---------------H--------HHHHhhhcCCCC-----CccccCCHHHHHHHHHcc
Q 001059 596 GIVFFELWH--PFSTAME-RQ---------------I--------VLSDLKQKGELP-----PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 596 GviL~ELlt--Pf~~~~~-~~---------------~--------~~~~l~~~~~~p-----~~~~~~~~e~~~LI~~~L 644 (1170)
||||.||++ |..+..+ .. . ....+...+..| ..+++.+|.+.+|+.+||
T Consensus 215 GCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL 294 (359)
T KOG0660|consen 215 GCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKML 294 (359)
T ss_pred hHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHh
Confidence 999999996 3222111 00 0 011112222222 234567789999999999
Q ss_pred CCCCCCCCCHHHHHhccCCCCchHHHHHHHHHhcCCCCCccchhhh
Q 001059 645 SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKV 690 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 690 (1170)
..||.+|+|++|+|+||++ ..++.++|++.+...
T Consensus 295 ~fdP~kRita~eAL~hPYl------------~~~hdp~dEP~~~~~ 328 (359)
T KOG0660|consen 295 VFDPKKRITAEEALAHPYL------------APYHDPEDEPVCQPI 328 (359)
T ss_pred ccCccccCCHHHHhcChhh------------hhhcCCccCCCCCCC
Confidence 9999999999999999844 456777777755433
|
|
| >TIGR00418 thrS threonyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-41 Score=412.92 Aligned_cols=349 Identities=12% Similarity=0.039 Sum_probs=274.7
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|+.||+|.++.+++.|++.+++.+.++||++|.||+| ++. ++.+...++||+|.|++|+.++|||+.|+++
T Consensus 188 ~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sg~~~~~~~emy~~~d~~~~~~~LrP~~~~~i 267 (563)
T TIGR00418 188 IGPGLPFWLPKGATIRNLLEDFVRQKQIKYGYMEVETPIMYDLELWEISGHWDNYKERMFPFTELDNREFMLKPMNCPGH 267 (563)
T ss_pred cCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCcccchhhcceeccCCCceEEEecCCCHHH
Confidence 4789999999999999999999999999999999999999 222 3467788999999999999999999999999
Q ss_pred HHHHHhCC----CCceeEEEecCeEEcCCCCC-----CCCceeEeEEEEeCCCCcccHHH---HHHHHHHHHHHcCCCcc
Q 001059 788 IRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 788 aR~~~~~~----~~P~r~~Y~g~VfR~e~~~~-----~~~ef~Q~GvEiiG~~~~~aDaE---vi~la~~~l~~lgi~~~ 855 (1170)
+|+++.+. ..|+|+||+|+|||+|.... |.|||+|.|+|+||. ...+|+| +|.++.++++.||++.
T Consensus 268 ~~~~~~~~~s~~~lP~rl~~~g~~fR~E~~g~~~Gl~R~reF~q~~~~~~~~-~~~~~~e~~~~i~~~~~~~~~lgl~~- 345 (563)
T TIGR00418 268 FLIFKSSLRSYRDLPLRIAELGYSHRYEQSGELHGLMRVRGFTQDDAHIFCT-EDQIKEEFKNQFRLIQKVYSDFGFSF- 345 (563)
T ss_pred HHHHhCcCCChHHCCceeeEeccccCCCCCcCCcCcccccceEEeeeEEEcC-HHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 99998753 35999999999999995542 667899999999998 5667776 9999999999999985
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.++....- +.++-+..+.
T Consensus 346 ~~~~l~~~~~~----~~~~~~~~~~------------------------------------------------------- 366 (563)
T TIGR00418 346 DKYELSTRDPE----DFIGEDELWE------------------------------------------------------- 366 (563)
T ss_pred EEEEEeCCChh----hhcCCHHHHH-------------------------------------------------------
Confidence 88888852110 0011000000
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccc-ccceecccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV-EGTLLAVGGRY 1014 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~-~~~~I~~GGRY 1014 (1170)
.....+.. .|+.+|+ .+.+|.+ ||++||+.++|++ ....+..-+.+ .+..+++||||
T Consensus 367 --~~~~~~~~---------------~l~~~~i--~~~~~~~--~g~~y~~~~~f~~-~~~lg~~~~~~t~q~~~~~g~ry 424 (563)
T TIGR00418 367 --KAEAALEE---------------ALKELGV--PYEIDPG--RGAFYGPKIDFAF-KDALGREWQCATVQLDFELPERF 424 (563)
T ss_pred --HHHHHHHH---------------HHHhCCC--ceEEcCC--CcceecceEEEEe-ecCCCCceeeceeeeccCCHhhc
Confidence 00000000 2344555 4677887 9999999999996 43333211111 13458999999
Q ss_pred chh-hhhcccccccccCCCCCCCCce---EEeccHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHH
Q 001059 1015 DYL-LHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELVAEL 1088 (1170)
Q Consensus 1015 D~L-~~~fg~~~~~~~~g~~~~~pAv---GfaiglerL~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~L 1088 (1170)
|.+ ....|++ ..|++ |||+|+|||+.+|.+. ...+...++.+|+|++.+ +....+|+++|+.|
T Consensus 425 d~~~~~~~g~~----------~~p~ii~~Gfa~gieRli~~l~e~~~~~~p~~~~p~~v~vi~~~-~~~~~~a~~ia~~L 493 (563)
T TIGR00418 425 DLTYVDEDNEE----------KRPVMIHRAILGSIERFIAILLEKYAGNFPLWLAPVQVVVIPVN-ERHLDYAKKVAQKL 493 (563)
T ss_pred CCEEECCCCCE----------EeeEEEEeeccCcHHHHHHHHHHhccCCCCCcCCCceEEEEEcc-chHHHHHHHHHHHH
Confidence 995 5666554 35885 9999999999888421 212223467889999986 66789999999999
Q ss_pred HHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 001059 1089 WEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1157 (1170)
Q Consensus 1089 R~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~ 1157 (1170)
|+.|++|+++.. ++++++++++|++.|+|++|++|++|+++|+|+||||++|+|..++++++++.+++
T Consensus 494 R~~Gi~v~~d~~-~~sl~~q~k~A~~~g~~~~iiiG~~E~~~~~v~vk~~~~g~q~~v~~~el~~~i~~ 561 (563)
T TIGR00418 494 KKAGIRVDVDDR-NERLGKKIREAQKQKIPYMLVVGDKEMESLAVNVRTRKGQKLEKMSLDEFLEKLRK 561 (563)
T ss_pred HHcCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEchhhhhCCeEEEEECCCCccceeeHHHHHHHHHh
Confidence 999999998876 67999999999999999999999999999999999999999999999999887754
|
This model represents the threonyl-tRNA synthetase found in most organisms. This protein is a class II tRNA synthetase, and is recognized by the pfam model tRNA-synt_2b. Note that B. subtilis has closely related isozymes thrS and thrZ. The N-terminal regions are quite dissimilar between archaeal and eubacterial forms, while some eukaryotic forms are missing sequence there altogether.. |
| >KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-42 Score=382.47 Aligned_cols=268 Identities=27% Similarity=0.487 Sum_probs=221.0
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------------hhhHHHHHHHHHHHHhccCCCce
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------------LPVNDRILREVATLSRLQHQHVV 417 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~------------~~~~~~~~~Ev~iL~~l~HpnIV 417 (1170)
....+++|++++.||+|.||+|.+|++..+++.||||++.+.... ....+++.+|+.+|++|+|||||
T Consensus 92 ~~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV 171 (576)
T KOG0585|consen 92 DRKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVV 171 (576)
T ss_pred cceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCee
Confidence 445689999999999999999999999999999999999754321 11235789999999999999999
Q ss_pred eEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCC-CCHHHHH
Q 001059 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAW 496 (1170)
Q Consensus 418 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~e~~~~ 496 (1170)
+++++.-++ ....+|||+|||...-..+...... +++.+++
T Consensus 172 ~LiEvLDDP--------------------------------------~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar 213 (576)
T KOG0585|consen 172 KLIEVLDDP--------------------------------------ESDKLYLVLEYCSKGEVKWCPPDKPELSEQQAR 213 (576)
T ss_pred EEEEeecCc--------------------------------------ccCceEEEEEeccCCccccCCCCcccccHHHHH
Confidence 999886432 3678999999998544445554555 9999999
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 497 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 497 ~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
+|+.+++.||+|||.+|||||||||+|+||+++|++||+|||.+....... ..+........+|||+|||
T Consensus 214 ~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~----------~~~~d~~L~~tvGTPAF~A 283 (576)
T KOG0585|consen 214 KYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGS----------DEGSDDQLSRTVGTPAFFA 283 (576)
T ss_pred HHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCC----------ccccHHHHhhcCCCccccc
Confidence 999999999999999999999999999999999999999999998653221 1111222234689999999
Q ss_pred cccccC---CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 577 PEIEQG---WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 577 PE~l~~---~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
||...+ ....+.+.||||+||+||-|+. ||......+..-+++.....+|.. ....+.+++||++||++||.+
T Consensus 284 PE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~-pe~~e~~kDli~~lL~KdP~~ 362 (576)
T KOG0585|consen 284 PELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN-PEINEDLKDLIKRLLEKDPEQ 362 (576)
T ss_pred hHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc-ccccHHHHHHHHHHhhcChhh
Confidence 998876 2335789999999999999984 999998888888887765555543 355678999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 001059 651 RPSATELLQDALPPQM 666 (1170)
Q Consensus 651 RPta~eiL~~~~~~~~ 666 (1170)
|.+..+|..|||..+.
T Consensus 363 Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 363 RITLPDIKLHPWVTRD 378 (576)
T ss_pred eeehhhheecceeccC
Confidence 9999999999997665
|
|
| >KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-41 Score=381.33 Aligned_cols=261 Identities=34% Similarity=0.529 Sum_probs=213.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|...+.||+|+||.||++.+..+|..+|||.+...... ..+.+.+|+.+|++++|||||+++|.....
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~--~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~-------- 86 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP--TSESLEREIRILSRLNHPNIVQYYGSSSSR-------- 86 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccch--hHHHHHHHHHHHHhCCCCCEEeeCCccccc--------
Confidence 4577889999999999999999999999999998765322 266789999999999999999999753110
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+...++|.|||++ |+|.+++...+ .++++.++.++.||++||+|||++
T Consensus 87 ------------------------------~~~~~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~ 136 (313)
T KOG0198|consen 87 ------------------------------ENDEYNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSK 136 (313)
T ss_pred ------------------------------cCeeeEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0147899999997 69999998877 799999999999999999999999
Q ss_pred CccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 GIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
|||||||||+|||++. ++.+||+|||+++...... ..........|||.|||||++.......+++|
T Consensus 137 g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~------------~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sD 204 (313)
T KOG0198|consen 137 GIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG------------TKSDSELSVQGTPNYMAPEVIRNGEVARRESD 204 (313)
T ss_pred CEeccCcccceEEEeCCCCeEEeccCcccccccccc------------ccccccccccCCccccCchhhcCCCcCCccch
Confidence 9999999999999999 7999999999998764200 01112345789999999999985223346999
Q ss_pred hHHHHHHHHHhhc---CCCc-hhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 592 MYSLGIVFFELWH---PFST-AMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~-~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||||++.||+| ||.. ....+....+... ...|..+...++++++||.+|+..||.+||||.++|+|||..+..
T Consensus 205 iWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig~~-~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~ 283 (313)
T KOG0198|consen 205 IWSLGCTVVEMLTGKPPWSEFFEEAEALLLIGRE-DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNS 283 (313)
T ss_pred hhhcCCEEEeccCCCCcchhhcchHHHHHHHhcc-CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhccc
Confidence 9999999999998 6665 2334444444443 345556666788999999999999999999999999999988765
Q ss_pred H
Q 001059 668 Y 668 (1170)
Q Consensus 668 ~ 668 (1170)
.
T Consensus 284 ~ 284 (313)
T KOG0198|consen 284 I 284 (313)
T ss_pred c
Confidence 4
|
|
| >KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-43 Score=363.82 Aligned_cols=259 Identities=27% Similarity=0.449 Sum_probs=227.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+-+.|++-++||+|.|+.||++.+..+|+.+|+|+|+.+.-+....+++.+|+.+.+.|+|||||++++.+
T Consensus 8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti-------- 79 (355)
T KOG0033|consen 8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI-------- 79 (355)
T ss_pred ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhh--------
Confidence 456789999999999999999999999999999999987776666778999999999999999999998665
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+.|+|+|++.| +|..-+..+--+++..+-.+++||++||.|+|
T Consensus 80 --------------------------------~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH 127 (355)
T KOG0033|consen 80 --------------------------------QEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCH 127 (355)
T ss_pred --------------------------------cccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 235678999999975 78777766667899999999999999999999
Q ss_pred hCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
.+||||||+||+|+|+-+. --+||+|||+|..+.... ...+++|||.|||||++.. ..|+
T Consensus 128 ~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~----------------~~~G~~GtP~fmaPEvvrk-dpy~ 190 (355)
T KOG0033|consen 128 SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGE----------------AWHGFAGTPGYLSPEVLKK-DPYS 190 (355)
T ss_pred hcCceeccCChhheeeeeccCCCceeecccceEEEeCCcc----------------ccccccCCCcccCHHHhhc-CCCC
Confidence 9999999999999999543 349999999998765221 1346799999999999998 5699
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
..+|||+.|||||-|+. ||++.+.......+.......|+ .|..+++++++|+++||..||.+|.|+.|.|+|||.
T Consensus 191 kpvDiW~cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi 270 (355)
T KOG0033|consen 191 KPVDIWACGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWI 270 (355)
T ss_pred CcchhhhhhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchh
Confidence 99999999999999985 99988777777777777777665 999999999999999999999999999999999999
Q ss_pred CCch
Q 001059 664 PQME 667 (1170)
Q Consensus 664 ~~~~ 667 (1170)
.+..
T Consensus 271 ~~r~ 274 (355)
T KOG0033|consen 271 CNRE 274 (355)
T ss_pred cchH
Confidence 8765
|
|
| >KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-41 Score=389.43 Aligned_cols=253 Identities=24% Similarity=0.430 Sum_probs=214.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|....+||+|+.|.||.|+...+++.||||.+.+.... ..+-+++|+.+|+..+|+|||.+++.|+.
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~--~keLilnEi~Vm~~~~H~NiVnfl~Sylv--------- 341 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQP--KKELLLNEILVMRDLHHPNIVNFLDSYLV--------- 341 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCC--chhhhHHHHHHHHhccchHHHHHHHHhcc---------
Confidence 5677788999999999999999999999999999876654 34568999999999999999999977732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+||||++ |+|.+++.. ..++|.++..++++++.||+|||.+|
T Consensus 342 -------------------------------~deLWVVMEym~ggsLTDvVt~-~~~~E~qIA~Icre~l~aL~fLH~~g 389 (550)
T KOG0578|consen 342 -------------------------------GDELWVVMEYMEGGSLTDVVTK-TRMTEGQIAAICREILQGLKFLHARG 389 (550)
T ss_pred -------------------------------cceeEEEEeecCCCchhhhhhc-ccccHHHHHHHHHHHHHHHHHHHhcc
Confidence 357899999996 577777654 44999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+|||||++|||++.+|.+||+|||+|..+..... ..++.+|||+|||||++.. ..|++++|||
T Consensus 390 IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~---------------KR~TmVGTPYWMAPEVvtr-k~YG~KVDIW 453 (550)
T KOG0578|consen 390 IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS---------------KRSTMVGTPYWMAPEVVTR-KPYGPKVDIW 453 (550)
T ss_pred eeeeccccceeEeccCCcEEEeeeeeeeccccccC---------------ccccccCCCCccchhhhhh-cccCccccch
Confidence 99999999999999999999999999998754331 2467799999999999998 6799999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||+++||+- ||....+-.....+..........+...++++++|+.+||+.||.+|++|.++|+|||++..
T Consensus 454 SLGIMaIEMveGEPPYlnE~PlrAlyLIa~ng~P~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a 529 (550)
T KOG0578|consen 454 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPKLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMA 529 (550)
T ss_pred hhhhHHHHHhcCCCCccCCChHHHHHHHhhcCCCCcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhc
Confidence 99999999994 77765554444333332222234556788999999999999999999999999999998544
|
|
| >KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-41 Score=371.34 Aligned_cols=279 Identities=25% Similarity=0.394 Sum_probs=232.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
-+++|++++.||+|.-|+||+|+.+.++..+|+|++.+.... .....+..-|-+||+.++||.++.+|..|
T Consensus 75 ~l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f-------- 146 (459)
T KOG0610|consen 75 GLRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF-------- 146 (459)
T ss_pred CHHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee--------
Confidence 357899999999999999999999999999999999765432 33455677899999999999999999887
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...++|++||||+ |+|..+++++ +.|+++.++.|+.+++.||+|
T Consensus 147 --------------------------------et~~~~cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEY 194 (459)
T KOG0610|consen 147 --------------------------------ETDKYSCLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEY 194 (459)
T ss_pred --------------------------------eccceeEEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHH
Confidence 23678999999997 5898888765 459999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccc-cccccC-----------------CCCC-----CCC-------
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQD-----------------AAFP-----TDT------- 558 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~-~~~~~~-----------------~~~~-----~~~------- 558 (1170)
||-.|||+|||||+||||.++|||.|+||-++..... +...+. ..+. ...
T Consensus 195 LHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~ 274 (459)
T KOG0610|consen 195 LHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDE 274 (459)
T ss_pred HHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccc
Confidence 9999999999999999999999999999999976532 111100 0000 000
Q ss_pred -----------CCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhh---cCCCchhHHHHHHHHhhhcCC
Q 001059 559 -----------GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGE 624 (1170)
Q Consensus 559 -----------~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELl---tPf~~~~~~~~~~~~l~~~~~ 624 (1170)
........+++||-.|+|||++.| ...+.++|||+|||++|||+ |||.+....+.+..++.+...
T Consensus 275 ~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G-~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~ 353 (459)
T KOG0610|consen 275 SASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRG-EGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLK 353 (459)
T ss_pred cccccchhhhcCCCCccccccccccccccceeeec-CCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCc
Confidence 111234567899999999999999 45899999999999999999 599999999999988887777
Q ss_pred CCCccccCCHHHHHHHHHccCCCCCCCCC----HHHHHhccCCCCchHHHHHH
Q 001059 625 LPPSWVAKFSEQESLLRRLMSPSPSDRPS----ATELLQDALPPQMEYELLDN 673 (1170)
Q Consensus 625 ~p~~~~~~~~e~~~LI~~~L~~dP~~RPt----a~eiL~~~~~~~~~~~~~~~ 673 (1170)
+|... ..+..+++||+++|.+||.+|.. |.+|-+||||+++.|.++..
T Consensus 354 Fp~~~-~vs~~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnWaLir~ 405 (459)
T KOG0610|consen 354 FPEEP-EVSSAAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNWALIRC 405 (459)
T ss_pred CCCCC-cchhHHHHHHHHHhccChhhhhccccchHHhhcCccccCCChhheec
Confidence 77654 56679999999999999999998 99999999999999996543
|
|
| >KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-41 Score=367.67 Aligned_cols=252 Identities=28% Similarity=0.468 Sum_probs=218.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...+|++.+.||+|.||+|.+|+....|+.||||.|+... .+..+.-.+.||+++|+.|+||||+++|.+|
T Consensus 51 lkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF-------- 122 (668)
T KOG0611|consen 51 LKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF-------- 122 (668)
T ss_pred hhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh--------
Confidence 3568999999999999999999998899999999997654 3444566789999999999999999999887
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+....+.|||||.. |.|++++.+++.+++.+++.|++||++|+.|||
T Consensus 123 --------------------------------ENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCH 170 (668)
T KOG0611|consen 123 --------------------------------ENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCH 170 (668)
T ss_pred --------------------------------cCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHh
Confidence 23577899999995 699999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
.++++|||||.+|||+|.++++||+|||++..+..... .+++||+|.|++||++.|.++-++.+
T Consensus 171 knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kf----------------LqTFCGSPLYASPEIvNG~PY~GPEV 234 (668)
T KOG0611|consen 171 KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKF----------------LQTFCGSPLYASPEIVNGTPYKGPEV 234 (668)
T ss_pred hccceecccchhheeecCCCCeeeeccchhhhhccccH----------------HHHhcCCcccCCccccCCCCCCCCcc
Confidence 99999999999999999999999999999987653332 25689999999999999987778999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|.|||||+||-|++ ||.+.+-...+.++-+....-|+. +.++.-||++||-.||++|.|+++|-.|=|..
T Consensus 235 DsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~GaYrEP~~----PSdA~gLIRwmLmVNP~RRATieDiAsHWWvN 307 (668)
T KOG0611|consen 235 DSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRGAYREPET----PSDASGLIRWMLMVNPERRATIEDIASHWWVN 307 (668)
T ss_pred chhhHHHHHHHHhhcccccCCchHHHHHHHhhcccccCCCC----CchHHHHHHHHHhcCcccchhHHHHhhhheee
Confidence 99999999999985 998877766666555444333432 34788899999999999999999999996543
|
|
| >PRK12294 hisZ ATP phosphoribosyltransferase regulatory subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-40 Score=362.70 Aligned_cols=255 Identities=14% Similarity=0.155 Sum_probs=195.0
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceecc----CCCcccccceEE-EeccCCceeeecCCCCHHHHHHHHhCCCCce
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL----GDCPQFKRNTVK-LLTHGGDLLELSHELRLPFIRWAISNQKSSF 799 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~----~~~~~~~~~my~-f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~ 799 (1170)
+.-.++.+++.++++|++|||++|.||+|++. ..++.....+++ |.|.+|+.++||||||+||||+++++...|.
T Consensus 6 ~~~~~~~ie~~l~~~f~~~GY~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~Gr~laLRpD~T~~iAR~~a~~~~~~~ 85 (272)
T PRK12294 6 QLIALKESETAFLKYFNKADYELVDFSVIEKLDWKQLNHEDLQQMGERSFWQHEHQIYALRNDFTDQLLRYYSMYPTAAT 85 (272)
T ss_pred HHHHHHHHHHHHHHHHHHcCCeEeeCCcchhHHhhhccccchhhhheeeeecCCCCEEEEcCCCCHHHHHHHHhcCCCCc
Confidence 44567899999999999999999999999322 224344455555 4466899999999999999999987655678
Q ss_pred eEEEecCeEEcCCCCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceE-EEeCcHHHHHHHHHHhCCCHH
Q 001059 800 KRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCD-IHLNHGDLLEAIWSWAGIKAE 878 (1170)
Q Consensus 800 r~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~-i~lg~~~il~~~l~~lgl~~~ 878 (1170)
|+||+|+|||++++ ++|+|||+|| .+..+|+|+|.+|.+++..+|..+ +. |.|||+++++++++. ++
T Consensus 86 Rl~Y~g~VfR~~~~------~~Q~GvEliG-~~~~a~~e~l~la~~~l~~~g~~~-~~~i~lGh~~~~~~l~~~----~~ 153 (272)
T PRK12294 86 KVAYAGLIIRNNEA------AVQVGIENYA-PSLANVQQSFKLFIQFIQQQLRDN-VHFVVLGHYQLLDALLDK----SL 153 (272)
T ss_pred eEEEeccEeccCCC------cceeceEEEC-CCchhHHHHHHHHHHHHHHhCCCC-CcEEEeccHHHHHHHHhC----HH
Confidence 99999999998643 8999999999 447999999999999999998765 53 899999999999984 56
Q ss_pred HHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHH
Q 001059 879 HREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALD 958 (1170)
Q Consensus 879 ~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~ 958 (1170)
.++++++++.+||.. ++ ++++... ..+..++.. ....+++++..+........+.|.
T Consensus 154 ~~~~l~~~l~~Kn~~------------~l-~~~l~~~-------~~l~~~l~~---~~~~~l~~a~~l~~~~~~~~~~L~ 210 (272)
T PRK12294 154 QTPDILSMIEERNLS------------GL-VTYLSTE-------HPIVQILKE---NTQQQLNVLEHYIPNDHPALVELK 210 (272)
T ss_pred HHHHHHHHHHhcCHH------------HH-HHHHhhh-------hhHHHHHHh---chHHHHHHHHHhhhhhHHHHHHHH
Confidence 778899999998832 12 2233211 112233321 124567777765543334444555
Q ss_pred HH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhccc
Q 001059 959 EL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWD 1023 (1170)
Q Consensus 959 ~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~ 1023 (1170)
.+ .++..+.. .+.||++++|+++||||+||++|.++.+. +|++|||||+|+++||.
T Consensus 211 ~l~~~l~~~~~~-~i~~Dl~~~r~~~YYTG~vF~~y~~~~~~--------~i~~GGRYD~Ll~~Fg~ 268 (272)
T PRK12294 211 IWERWLHTQGYK-DIHLDITAQPPRSYYTGLFIQCHFAENES--------RVLTGGYYKGSIEGFGL 268 (272)
T ss_pred HHHHHHHhcCCC-eEEEcccccCCCCCcCCeEEEEEECCCCC--------cccCCcCchhHHHhcCC
Confidence 54 56666765 59999999999999999999999987654 69999999999999863
|
|
| >cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-40 Score=372.74 Aligned_cols=254 Identities=26% Similarity=0.442 Sum_probs=214.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|.++.+|+.||+|++..... .....+.+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 71 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEH--------- 71 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhc---------
Confidence 478999999999999999999999999999999975432 2234456889999999999999999986652
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+..++|++|||++ ++|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 120 (291)
T cd05612 72 -------------------------------DQRFLYMLMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSK 120 (291)
T ss_pred -------------------------------cCCeEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 58999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~Di 181 (291)
T cd05612 121 EIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR------------------TWTLCGTPEYLAPEVIQS-KGHNKAVDW 181 (291)
T ss_pred CeeecCCCHHHeEECCCCCEEEEecCcchhccCC------------------cccccCChhhcCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999864211 123479999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~ 664 (1170)
|||||++|+|++ ||......+....+......+|. ..++.+++||++||+.||.+||+ ++++++|+|+.
T Consensus 182 wSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~ 258 (291)
T cd05612 182 WALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR---HLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc---cCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcCcccc
Confidence 999999999997 88776665555555444444443 34678999999999999999995 99999999998
Q ss_pred CchHHH
Q 001059 665 QMEYEL 670 (1170)
Q Consensus 665 ~~~~~~ 670 (1170)
...+..
T Consensus 259 ~~~~~~ 264 (291)
T cd05612 259 SVDWDD 264 (291)
T ss_pred CCCHHH
Confidence 877543
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt |
| >PTZ00263 protein kinase A catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-40 Score=379.24 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=216.4
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
...+++|++.+.||+|+||.||+|+++.+|+.||||+++.... .....+.+.+|+.+|+.++||||++++++|.+
T Consensus 14 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~---- 89 (329)
T PTZ00263 14 SWKLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQD---- 89 (329)
T ss_pred CCCchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEc----
Confidence 3446899999999999999999999999999999999975432 22334678899999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|++||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 90 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 133 (329)
T PTZ00263 90 ------------------------------------ENRVYFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEY 133 (329)
T ss_pred ------------------------------------CCEEEEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+ ..++.
T Consensus 134 LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~ 194 (329)
T PTZ00263 134 LHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDR------------------TFTLCGTPEYLAPEVIQS-KGHGK 194 (329)
T ss_pred HHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCC------------------cceecCChhhcCHHHHcC-CCCCC
Confidence 99999999999999999999999999999999754211 123579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 660 (1170)
++|||||||++|||++ ||...........+......+|. ..++.+++||++||+.||.+||+ +++++.|
T Consensus 195 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 195 AVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN---WFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred cceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 9999999999999997 88766555444444433333332 35678999999999999999996 7999999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
|||....+..+
T Consensus 272 p~f~~~~~~~~ 282 (329)
T PTZ00263 272 PYFHGANWDKL 282 (329)
T ss_pred CccCCCCHHHH
Confidence 99998765543
|
|
| >cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-39 Score=367.67 Aligned_cols=254 Identities=24% Similarity=0.392 Sum_probs=204.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++.+.||.|+||+||+|+++.+++.||+|+++..... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~--------- 73 (288)
T cd07871 4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKNLKHANIVTLHDIIH--------- 73 (288)
T ss_pred cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccC-CcchhHHHHHHHHHhCCCCCEeeEEEEEc---------
Confidence 57899999999999999999999999999999999754322 22346789999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|+||||++++|.+++.... .+++..+..++.||+.||+|||++
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 122 (288)
T cd07871 74 -------------------------------TERCLTLVFEYLDSDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKR 122 (288)
T ss_pred -------------------------------CCCeEEEEEeCCCcCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 235689999999999999887654 478999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 123 ~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 187 (288)
T cd07871 123 KILHRDLKPQNLLINEKGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSTEYSTPIDM 187 (288)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCcceeeccCCC---------------ccccCceecccccChHHhcCCcccCcHHHH
Confidence 99999999999999999999999999997532111 012335789999999998765568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CCC--------ccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP--------SWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~--------~~~~~~~e~~~LI~~ 642 (1170)
||+||++|+|++ ||......+....+....+. .|. .....++++.+||++
T Consensus 188 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 267 (288)
T cd07871 188 WGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSS 267 (288)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchhhhccccCccCCCchHHhCCCCCHHHHHHHHH
Confidence 999999999997 77655444333222211111 000 112345688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCC
Q 001059 643 LMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||+.||.+|||++++++||||
T Consensus 268 mL~~dp~~R~t~~~~l~hp~f 288 (288)
T cd07871 268 LLLYETKSRISAEAALRHSYF 288 (288)
T ss_pred hcCcCcccCCCHHHHhcCCCC
Confidence 999999999999999999997
|
Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament |
| >KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=351.82 Aligned_cols=260 Identities=25% Similarity=0.440 Sum_probs=222.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--C----hhhHHHHHHHHHHHHhc-cCCCceeEEEEEe
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--S----LPVNDRILREVATLSRL-QHQHVVRYYQAWF 424 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~--~----~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~ 424 (1170)
.+.+.|+-.+.||+|..++|.+|.++.+|+.+|+|+|..... + .+..+.-.+|+.+|+++ .||||+++++.|.
T Consensus 14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye 93 (411)
T KOG0599|consen 14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE 93 (411)
T ss_pred hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence 345678888999999999999999999999999999975421 1 22334567899999999 6999999998872
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~ 503 (1170)
...++|+|+|.|+ |.|.++|.+.-.+++..+++++.|++
T Consensus 94 ----------------------------------------s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlf 133 (411)
T KOG0599|consen 94 ----------------------------------------SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLF 133 (411)
T ss_pred ----------------------------------------CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHH
Confidence 2457899999998 79999999988999999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG- 582 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~- 582 (1170)
+|++|||.++||||||||+|||++++.++||+|||+|+.+..... ....||||+|+|||.+..
T Consensus 134 egVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~Gek----------------LrelCGTPgYLAPEtikC~ 197 (411)
T KOG0599|consen 134 EGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEK----------------LRELCGTPGYLAPETIKCS 197 (411)
T ss_pred HHHHHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchh----------------HHHhcCCCcccChhheeee
Confidence 999999999999999999999999999999999999998754431 245699999999998753
Q ss_pred ----CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 583 ----WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 583 ----~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
.+.|+..+|+||+|||+|.|+. ||+..........+..++..+ .|.|.+++.+.++||.+||+.||.+|.|+
T Consensus 198 m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWadis~~~KdLIsrlLqVdp~~Rita 277 (411)
T KOG0599|consen 198 MYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWADISATVKDLISRLLQVDPTKRITA 277 (411)
T ss_pred cccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchhhccccHHHHHHHHHeeCchhcccH
Confidence 3558999999999999999995 888776666565666555554 57899999999999999999999999999
Q ss_pred HHHHhccCCCCch
Q 001059 655 TELLQDALPPQME 667 (1170)
Q Consensus 655 ~eiL~~~~~~~~~ 667 (1170)
+++|+||||.++.
T Consensus 278 ke~LaHpff~q~~ 290 (411)
T KOG0599|consen 278 KEALAHPFFIQIA 290 (411)
T ss_pred HHHhcChHHHHHH
Confidence 9999999997764
|
|
| >cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-39 Score=369.84 Aligned_cols=260 Identities=26% Similarity=0.412 Sum_probs=206.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||+||+|+++.+|+.||||+++..... .....+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------- 74 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEE-GTPFTAIREASLLKGLKHANIVLLHDIIHT-------- 74 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEecccccc-ccchhHHHHHHHHhhCCCCCcCeEEEEEec--------
Confidence 36899999999999999999999999999999999754322 223467889999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+++|.+.+... ..+++..++.++.||+.||+|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 122 (303)
T cd07869 75 --------------------------------KETLTLVFEYVHTDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQR 122 (303)
T ss_pred --------------------------------CCeEEEEEECCCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3578999999999998887654 5689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+...++.++||
T Consensus 123 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 187 (303)
T cd07869 123 YILHRDLKPQNLLISDTGELKLADFGLARAKSVPS---------------HTYSNEVVTLWYRPPDVLLGSTEYSTCLDM 187 (303)
T ss_pred CeecCCCCHHHEEECCCCCEEECCCCcceeccCCC---------------ccCCCCcccCCCCChHHHcCCCCCCcHHHH
Confidence 99999999999999999999999999987532111 112345789999999998775668999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhc-CC-----------------------CCCcc------ccCCHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GE-----------------------LPPSW------VAKFSEQESL 639 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~-~~-----------------------~p~~~------~~~~~e~~~L 639 (1170)
|||||++|||++ ||....+.......+... +. .+..+ ...++++.+|
T Consensus 188 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl 267 (303)
T cd07869 188 WGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDL 267 (303)
T ss_pred HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhccccccccccccCCccHHHHhhccCCChHHHHH
Confidence 999999999997 776543322211111100 00 00000 0123578899
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
|.+||+.||.+|||+.++++||||......
T Consensus 268 i~~mL~~dp~~R~s~~~~l~h~~f~~~~~~ 297 (303)
T cd07869 268 ASKLLQCFPKNRLSAQAALSHEYFSDLPPR 297 (303)
T ss_pred HHHHhccCchhccCHHHHhcCcccccCChh
Confidence 999999999999999999999999887643
|
Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an |
| >cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-39 Score=374.58 Aligned_cols=265 Identities=28% Similarity=0.408 Sum_probs=208.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||.||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++....
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~-------- 72 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPS-------- 72 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccC--------
Confidence 489999999999999999999999999999998754333334557889999999999999999998874321
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
......+|+|||||+++|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 73 ---------------------------~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~iv 125 (338)
T cd07859 73 ---------------------------RREFKDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVF 125 (338)
T ss_pred ---------------------------CCCCceEEEEEecCCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 01234689999999999999998888899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 594 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwS 594 (1170)
||||||+|||++.++.+||+|||+++....... ........+||+.|+|||++.+. ..++.++||||
T Consensus 126 H~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwS 193 (338)
T cd07859 126 HRDLKPKNILANADCKLKICDFGLARVAFNDTP------------TAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWS 193 (338)
T ss_pred cCCCCHHHeEECCCCcEEEccCccccccccccC------------ccccccCCCCCCCcCCHHHHhccccccCchhHHHH
Confidence 999999999999999999999999975421110 00112345799999999998652 45899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHH--------------------------HHhhhcCCC--CCccccCCHHHHHHHHHc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVL--------------------------SDLKQKGEL--PPSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~--------------------------~~l~~~~~~--p~~~~~~~~e~~~LI~~~ 643 (1170)
|||++|||++ ||.......... ..+...... ...+...++.+.++|.+|
T Consensus 194 lGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 273 (338)
T cd07859 194 IGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERL 273 (338)
T ss_pred HHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHH
Confidence 9999999997 665432211110 000000111 112234567889999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 001059 644 MSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|+.||++|||++++++||||.+..
T Consensus 274 l~~~P~~Rpt~~e~l~hp~f~~~~ 297 (338)
T cd07859 274 LAFDPKDRPTAEEALADPYFKGLA 297 (338)
T ss_pred cCcCcccCCCHHHHhcCchhhhcC
Confidence 999999999999999999998754
|
Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos |
| >cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-39 Score=365.06 Aligned_cols=254 Identities=26% Similarity=0.422 Sum_probs=203.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||+||+|+++.+++.||+|+++...........+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------- 70 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFR---------- 70 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEe----------
Confidence 4799999999999999999999999999999999765544445567889999999999999999998763
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~-~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|+||||+++++.+.+. ....+++..++.++.||+.||+|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 120 (287)
T cd07848 71 ------------------------------RRGKLYLVFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKND 120 (287)
T ss_pred ------------------------------cCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 245789999999876655554 3456999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||++....... ........||+.|+|||++.+ ..++.++|||
T Consensus 121 i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Diw 185 (287)
T cd07848 121 IVHRDIKPENLLISHNDVLKLCDFGFARNLSEGS--------------NANYTEYVATRWYRSPELLLG-APYGKAVDMW 185 (287)
T ss_pred eecCCCCHHHEEEcCCCcEEEeeccCcccccccc--------------cccccccccccccCCcHHHcC-CCCCCchhHH
Confidence 9999999999999999999999999998653211 001233578999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-------------------C----------ccccCCHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-------------------P----------SWVAKFSEQESLLR 641 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-------------------~----------~~~~~~~e~~~LI~ 641 (1170)
||||++|||++ ||................+..| . .....++++.+||+
T Consensus 186 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~ 265 (287)
T cd07848 186 SVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMK 265 (287)
T ss_pred hHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccchhcccccCcccCcccHHHhhhcccCHHHHHHHH
Confidence 99999999997 6765443332222111111111 0 01124567899999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 001059 642 RLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+||+.||++|||++++|+||||
T Consensus 266 ~~L~~~P~~R~s~~~~l~hp~f 287 (287)
T cd07848 266 NLLKLNPTDRYLTEQCLNHPAF 287 (287)
T ss_pred HHccCCcccCCCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes |
| >KOG0589 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-40 Score=376.59 Aligned_cols=253 Identities=33% Similarity=0.554 Sum_probs=221.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|+.++++|+|+||.+++++++.+++.||+|+|.....+....+...+|+.++++++|||||.+.+.|++.
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~------- 75 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEED------- 75 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcC-------
Confidence 5789999999999999999999999999999999998887777777899999999999999999999998653
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
..+++|+|+||+ |++.+.+.+.. .|+++.++.++.||+.|+.|||
T Consensus 76 --------------------------------~~~l~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH 123 (426)
T KOG0589|consen 76 --------------------------------GQLLCIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH 123 (426)
T ss_pred --------------------------------CceEEEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 456899999996 58998887554 5999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++|+|||||+.|||++.++.|||+|||+|+.+..+. ....+.+|||.||+||++.+ -.|+.|+
T Consensus 124 ~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~---------------~~a~tvvGTp~YmcPEil~d-~pYn~KS 187 (426)
T KOG0589|consen 124 ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPED---------------SLASTVVGTPYYMCPEILSD-IPYNEKS 187 (426)
T ss_pred hhhhhcccchhhhhhccccCceeecchhhhhhcCCch---------------hhhheecCCCcccCHHHhCC-CCCCccC
Confidence 9999999999999999999999999999999875432 01356799999999999999 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||||++|||++ +|...+......++.... ..|.....+.+++.+|+.||..+|..||++.++|.+|..
T Consensus 188 DiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~--~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~P~l 261 (426)
T KOG0589|consen 188 DIWSLGCCLYEMCTLKPAFKASNMSELILKINRGL--YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRRPHL 261 (426)
T ss_pred cchhhcchHHHHHhcccccCccchHHHHHHHhhcc--CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhChhh
Confidence 99999999999997 787777666666666544 445555667899999999999999999999999998643
|
|
| >cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-39 Score=373.01 Aligned_cols=251 Identities=25% Similarity=0.368 Sum_probs=208.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+.||+|+||.||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~--------------- 65 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQ--------------- 65 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEE---------------
Confidence 369999999999999999999999999975432 2233456789999999999999999998873
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
...++|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||++||+|||
T Consensus 66 -------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrD 120 (323)
T cd05571 66 -------------------------THDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRD 120 (323)
T ss_pred -------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCC
Confidence 2457899999997 58999998888899999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlG~i 184 (323)
T cd05571 121 LKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEECCCCCEEEeeCCCCcccccCC---------------CcccceecCccccChhhhcC-CCCCccccCcccchh
Confidence 99999999999999999999987431110 11234579999999999987 568999999999999
Q ss_pred HHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHHH
Q 001059 599 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 670 (1170)
+|||++ ||...........+......+| ...++++.+||++||+.||++|| ++.++++|+||....+..
T Consensus 185 l~elltg~~Pf~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~~~~~ 261 (323)
T cd05571 185 MYEMMCGRLPFYNQDHEKLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASINWQD 261 (323)
T ss_pred hhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999997 8876555444444443333333 34567999999999999999999 899999999999987653
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be |
| >KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-39 Score=357.54 Aligned_cols=265 Identities=29% Similarity=0.489 Sum_probs=214.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCC-ceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH-VVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hpn-IV~l~~~~~e~~~~~~~ 432 (1170)
+..|+.+++||+|+||+||+|+.+.+|+.||+|+++........-....||+.+|+.++|+| ||++++.+....
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~----- 84 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSN----- 84 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecc-----
Confidence 56788899999999999999999999999999999877554334456789999999999999 999999874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD----HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~----~l~e~~~~~i~~qI~~gL~y 508 (1170)
.......+++|+||+..+|..++.... .++...++.+++||+.||+|
T Consensus 85 -----------------------------~~~~~~~l~lvfe~~d~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~ 135 (323)
T KOG0594|consen 85 -----------------------------NHRGIGKLYLVFEFLDRDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF 135 (323)
T ss_pred -----------------------------cccccceEEEEEEeecccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence 012245789999999999999998755 58888999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||+++|+||||||+||||+.+|.+||+|||+|+...-+. ...++.++|.+|.|||++.|...|+.
T Consensus 136 ~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~---------------~~yt~evvTlWYRaPEvLlGs~~Ys~ 200 (323)
T KOG0594|consen 136 LHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPM---------------RTYTPEVVTLWYRAPEVLLGSTSYST 200 (323)
T ss_pred HHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCc---------------ccccccEEEeeccCHHHhcCCCcCCC
Confidence 999999999999999999999999999999999654221 11356789999999999999778999
Q ss_pred cchhHHHHHHHHHhhc--C-CCchhHHHHHHHHhhhcCCCC-Cc--------------------------cccCCHHHHH
Q 001059 589 KADMYSLGIVFFELWH--P-FSTAMERQIVLSDLKQKGELP-PS--------------------------WVAKFSEQES 638 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt--P-f~~~~~~~~~~~~l~~~~~~p-~~--------------------------~~~~~~e~~~ 638 (1170)
..||||+|||+.||++ | |.+.++.+....+.+.-+... .. .+...++..+
T Consensus 201 ~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~d 280 (323)
T KOG0594|consen 201 SVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIE 280 (323)
T ss_pred CcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHH
Confidence 9999999999999997 4 444444444443333211110 01 1112246789
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
++.+||+.+|.+|.|++.+|.|++|....
T Consensus 281 ll~~~L~y~p~~R~Sa~~al~h~yf~~~~ 309 (323)
T KOG0594|consen 281 LLSKLLQYDPAKRISAKGALTHPYFSELP 309 (323)
T ss_pred HHHHHhccCcccCcCHHHHhcChhhcccc
Confidence 99999999999999999999999988775
|
|
| >PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-39 Score=373.61 Aligned_cols=258 Identities=24% Similarity=0.373 Sum_probs=215.3
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg-~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
....++|++.+.||+|+||.||+|.++.++ ..||+|++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~--- 102 (340)
T PTZ00426 26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKD--- 102 (340)
T ss_pred CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEe---
Confidence 345689999999999999999999987655 6899999875432 22345578899999999999999999998733
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|++||||+ |+|.+++.....+++..++.++.||+.||+
T Consensus 103 -------------------------------------~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~ 145 (340)
T PTZ00426 103 -------------------------------------ESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFE 145 (340)
T ss_pred -------------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 457899999996 689999988888999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++++||+|||+++..... ....+||+.|||||++.+ ..++
T Consensus 146 ~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~ 206 (340)
T PTZ00426 146 YLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTR------------------TYTLCGTPEYIAPEILLN-VGHG 206 (340)
T ss_pred HHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCC------------------cceecCChhhcCHHHHhC-CCCC
Confidence 999999999999999999999999999999999754211 123579999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHh
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQ 659 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~ 659 (1170)
.++|||||||++|||++ ||...........+......+|+ ..++++.++|++||+.||.+|+ +++++++
T Consensus 207 ~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~ 283 (340)
T PTZ00426 207 KAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFPK---FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283 (340)
T ss_pred ccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHc
Confidence 99999999999999997 88766555444444443333443 3456899999999999999995 8999999
Q ss_pred ccCCCCchHHH
Q 001059 660 DALPPQMEYEL 670 (1170)
Q Consensus 660 ~~~~~~~~~~~ 670 (1170)
||||.+..+..
T Consensus 284 hp~f~~~~~~~ 294 (340)
T PTZ00426 284 HPWFGNIDWVS 294 (340)
T ss_pred CCCcCCCCHHH
Confidence 99999887653
|
|
| >KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-41 Score=374.90 Aligned_cols=253 Identities=28% Similarity=0.455 Sum_probs=214.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|..++.||+|+||.||+|.+..+++.||||++...... ...+++.+|+.+|.++++|||.++|++|+.
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~-deIediqqei~~Ls~~~~~~it~yygsyl~--------- 82 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAE-DEIEDIQQEISVLSQCDSPNITEYYGSYLK--------- 82 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcc-hhhHHHHHHHHHHHhcCcchHHhhhhheee---------
Confidence 3566779999999999999999999999999999876543 345778999999999999999999998843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...++++||||+ |++.+.+.....+++.++..++++++.||.|||+++
T Consensus 83 -------------------------------g~~LwiiMey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~ 131 (467)
T KOG0201|consen 83 -------------------------------GTKLWIIMEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEK 131 (467)
T ss_pred -------------------------------cccHHHHHHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcc
Confidence 456899999996 599999998888899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
.+|||||+.|||+..+|.+||+|||.+.++.... ....+++|||.|||||++++ ..|+.|+|||
T Consensus 132 kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~---------------~rr~tfvGTPfwMAPEVI~~-~~Y~~KADIW 195 (467)
T KOG0201|consen 132 KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV---------------KRRKTFVGTPFWMAPEVIKQ-SGYDTKADIW 195 (467)
T ss_pred eecccccccceeEeccCcEEEEecceeeeeechh---------------hccccccccccccchhhhcc-ccccchhhhh
Confidence 9999999999999999999999999998764322 12367899999999999996 6799999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||+++||++ |+....++....-+ ....||.. ...++.+++||..||++||+.||+|.++|+|.|.+...
T Consensus 196 SLGITaiEla~GePP~s~~hPmrvlflI---pk~~PP~L~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a~ 270 (467)
T KOG0201|consen 196 SLGITAIELAKGEPPHSKLHPMRVLFLI---PKSAPPRLDGDFSPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRAK 270 (467)
T ss_pred hhhHHHHHHhcCCCCCcccCcceEEEec---cCCCCCccccccCHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhcC
Confidence 99999999997 77666664332222 22233322 35667899999999999999999999999999887754
|
|
| >PRK00413 thrS threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-40 Score=408.64 Aligned_cols=359 Identities=15% Similarity=0.137 Sum_probs=267.8
Q ss_pred ccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC--CcccccceEEEeccCCceeeecC
Q 001059 708 TLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD--CPQFKRNTVKLLTHGGDLLELSH 781 (1170)
Q Consensus 708 ~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~--~~~~~~~my~f~D~~G~~laLRP 781 (1170)
...+++.+.|++||+|.++.+++.|++.++++|.+|||++|.||+| ++... .+...++||+|.|.+|+.++|||
T Consensus 252 ~~~~~~~~~G~~~~lp~~~~~~~~i~~~~~~~~~~~Gy~ei~tP~le~~~l~~~~g~~~~~~~~my~~~d~~~~~~~LRP 331 (638)
T PRK00413 252 LFHFQEEAPGLPFWHPKGWTIRRELERYIRRKLRKAGYQEVKTPQILDRELWETSGHWDHYRENMFPTTESDGEEYALKP 331 (638)
T ss_pred EEEecCCCCcceEEcccHHHHHHHHHHHHHHHHHHCCCEEEECCeeCCHHHHHhcCChhhhhhccceeecCCCcEEEEec
Confidence 3455677799999999999999999999999999999999999999 33322 35668999999999999999999
Q ss_pred CCCHHHHHHHHhCC----CCceeEEEecCeEEcCCCC---C--CCCceeEeEEEEeCCCCcc-cH-HHHHHHHHHHHHHc
Q 001059 782 ELRLPFIRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASAL-TE-AEVLKVTMDIVTRF 850 (1170)
Q Consensus 782 D~T~~iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~-aD-aEvi~la~~~l~~l 850 (1170)
+.|++++|+++++. ..|+|+||+|+|||+|+++ + |.|||+|+|+|+||.+++. +| +|+|.++.++++.|
T Consensus 332 ~~~~~~~r~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~~~g~~~~~~~e~~eii~l~~~~~~~l 411 (638)
T PRK00413 332 MNCPGHVQIYKQGLRSYRDLPLRLAEFGTVHRYEPSGALHGLMRVRGFTQDDAHIFCTPEQIEEEVKKVIDLILDVYKDF 411 (638)
T ss_pred CCcHHHHHHHhCcCCChhhCCceeeeccCeecCCCCCCCcCcceeeeeEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 99999999998753 3599999999999999986 2 5567999999999998875 46 99999999999999
Q ss_pred CCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q 001059 851 FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 930 (1170)
Q Consensus 851 gi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 930 (1170)
|+++ ++++||++ . . ..+|.++.+......+ .+.+...+++.+......+
T Consensus 412 g~~~-~~i~l~~r-~-~---~~~g~~~~~~~~~~~l----------------------~~~l~~~g~~~~~~~~~~~--- 460 (638)
T PRK00413 412 GFED-YEVKLSTR-P-E---KRIGSDEMWDKAEAAL----------------------KEALDELGLDYEIAPGEGA--- 460 (638)
T ss_pred CCce-EEEEEecC-C-c---ccCCCHHHHHHHHHHH----------------------HHHHHHcCCCceecCCccc---
Confidence 9985 99999997 2 2 2456554321111111 1111112222111111111
Q ss_pred HhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCC-cccceEEEEEeccCCCcccccccceec
Q 001059 931 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIES-YHRNLFFQVFSVKEKYPATLVEGTLLA 1009 (1170)
Q Consensus 931 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgld-YYtG~VFe~~~~~~~~~~~~~~~~~I~ 1009 (1170)
+.|+.. .. .+..++.++ ..+ ..+.+|+++.++++ ||||.+++.
T Consensus 461 -~~~~~~------~~------~~~~~~~~~----~~l-~~~~~d~~~~~~~dl~Yt~~~~~~------------------ 504 (638)
T PRK00413 461 -FYGPKI------DF------QLKDALGRE----WQC-GTIQLDFNLPERFDLTYVGEDGEK------------------ 504 (638)
T ss_pred -cccceE------EE------EeecCCCCe----EEe-ccEeecccChhhcCCEEECCCCCc------------------
Confidence 111100 00 000011111 000 23667777777777 676653211
Q ss_pred cccccchhhhhcccccccccCCCCCCCCce---EEeccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCccHHHHHH
Q 001059 1010 VGGRYDYLLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERME 1083 (1170)
Q Consensus 1010 ~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv---GfaiglerL~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ 1083 (1170)
..|++ |++-++||++.+|.+ +..+ ...+|.+|+|++.+ +....+|.+
T Consensus 505 -------------------------~~p~~i~~~~~g~~eRli~~l~e~~~~~~p-~~~~p~~v~Ii~~~-~~~~~~a~~ 557 (638)
T PRK00413 505 -------------------------HRPVMIHRAILGSMERFIGILIEHYAGAFP-TWLAPVQVVVLPIT-DKHADYAKE 557 (638)
T ss_pred -------------------------cCcEEEEecceehHHHHHHHHHHHcCCCCC-cccCcceEEEEEeC-hhHHHHHHH
Confidence 13677 677789999988852 3222 22457899999986 667889999
Q ss_pred HHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1084 LVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1084 ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+++.||+.|++|+++.. ++++++++++|++.|+|++|++|++|.++|+|+|||+++++|..++++++++.+++.+++
T Consensus 558 i~~~Lr~~gi~v~~d~~-~~~l~kki~~A~~~g~~~~iiiG~~E~~~~~v~vr~~~~~~q~~i~~~~l~~~i~~~~~~ 634 (638)
T PRK00413 558 VAKKLKAAGIRVEVDLR-NEKIGYKIREAQLQKVPYMLVVGDKEVEAGTVSVRRRGGKDLGTMSLDEFIERLLEEIAS 634 (638)
T ss_pred HHHHHHhCCCEEEEECC-CCCHhHHHHHhhccCCCEEEEEcchhhhcCeEEEEECCCCccceeeHHHHHHHHHHHHhh
Confidence 99999999999998876 679999999999999999999999999999999999999999999999999999887764
|
|
| >cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-39 Score=369.59 Aligned_cols=258 Identities=28% Similarity=0.446 Sum_probs=213.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|++..+|+.||||+++.... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~--------- 71 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQ--------- 71 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEE---------
Confidence 479999999999999999999999999999999975432 1223457889999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~ 120 (333)
T cd05600 72 -------------------------------DDEYLYLAMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHEL 120 (333)
T ss_pred -------------------------------cCCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||++..... .....+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv 181 (333)
T cd05600 121 GYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT------------------YANSVVGSPDYMAPEVLRG-KGYDFTVDY 181 (333)
T ss_pred CccccCCCHHHEEECCCCCEEEEeCcCCccccc------------------ccCCcccCccccChhHhcC-CCCCCccce
Confidence 999999999999999999999999999975421 1234579999999999988 478999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCc---cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPS---WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~---~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|||||++|||++ ||......+......... ...|.. ....++++.+||.+||..+|.+||++.++++|+||.
T Consensus 182 wslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~ 261 (333)
T cd05600 182 WSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFK 261 (333)
T ss_pred ecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCccccccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccC
Confidence 999999999996 887655544433322211 111211 124577999999999999999999999999999999
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...+...
T Consensus 262 ~~~~~~~ 268 (333)
T cd05600 262 EVDWNEL 268 (333)
T ss_pred CCCHHHH
Confidence 8876544
|
Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. |
| >cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=373.56 Aligned_cols=276 Identities=26% Similarity=0.437 Sum_probs=214.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~--------- 71 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQ--------- 71 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEe---------
Confidence 479999999999999999999999999999999975322 2233456888999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (363)
T cd05628 72 -------------------------------DKLNLYLIMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQL 120 (363)
T ss_pred -------------------------------cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999997 59999998888999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhcccccccc-----CCCCCCCC------C---------CccccCcccccCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ-----DAAFPTDT------G---------GVSVDGTGQVGTY 572 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~-----~~~~~~~~------~---------~~~~~~~~~~GT~ 572 (1170)
||+||||||+|||++.++++||+|||+++.+....... ....+.+. . .........+||+
T Consensus 121 givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~ 200 (363)
T cd05628 121 GFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTP 200 (363)
T ss_pred CeEecCCCHHHeEECCCCCEEEeeccCcccccccccccccccccccccccccccccccccccchhhhccccccccccCCc
Confidence 99999999999999999999999999998653211000 00000000 0 0000123468999
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCC-
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSP- 646 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~- 646 (1170)
.|+|||++.+ ..++.++|||||||++|||++ ||......+....+.... ..+|+ ....+++++++|.+|+..
T Consensus 201 ~Y~aPE~~~~-~~~~~~~DvwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~~~~ 278 (363)
T cd05628 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP-EVPISEKAKDLILRFCCEW 278 (363)
T ss_pred cccCHHHHcC-CCCCCchhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCcCcccCCC-cCCCCHHHHHHHHHHcCCh
Confidence 9999999987 568999999999999999997 887666555554444322 22333 234678999999997752
Q ss_pred -CCCCCCCHHHHHhccCCCCchHHHHH
Q 001059 647 -SPSDRPSATELLQDALPPQMEYELLD 672 (1170)
Q Consensus 647 -dP~~RPta~eiL~~~~~~~~~~~~~~ 672 (1170)
++..||++++|++||||....++.+.
T Consensus 279 ~~r~~r~~~~ei~~hp~f~~~~~~~~~ 305 (363)
T cd05628 279 EHRIGAPGVEEIKTNPFFEGVDWEHIR 305 (363)
T ss_pred hhcCCCCCHHHHhCCCCCCCCCHHHHH
Confidence 23356899999999999999877553
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus |
| >KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-40 Score=339.70 Aligned_cols=255 Identities=27% Similarity=0.456 Sum_probs=222.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..-+++|++.+.||+|-||.||+|+.+.++..||+|++.+... ......++.||+++-+.|+||||+++|++|.+
T Consensus 18 ~~~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd---- 93 (281)
T KOG0580|consen 18 TWTLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHD---- 93 (281)
T ss_pred ccchhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheec----
Confidence 3447899999999999999999999999999999999976542 22345689999999999999999999999843
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHH--hcCCCCHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE--SYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~--~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+++||.+ |++...|. ...++++..++.|+.|++.||
T Consensus 94 ------------------------------------~~riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al 137 (281)
T KOG0580|consen 94 ------------------------------------SKRIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANAL 137 (281)
T ss_pred ------------------------------------cceeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHH
Confidence 578899999996 79999998 667799999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
.|+|.++||||||||+|+|++..+.+||+|||.+.... ....++.|||..|.|||...+ ..+
T Consensus 138 ~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p-----------------~~kR~tlcgt~dyl~pEmv~~-~~h 199 (281)
T KOG0580|consen 138 LYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP-----------------SNKRKTLCGTLDYLPPEMVEG-RGH 199 (281)
T ss_pred HHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecC-----------------CCCceeeecccccCCHhhcCC-CCc
Confidence 99999999999999999999999999999999987431 123467899999999999998 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+..+|+|++|++.||++. ||...+..+...++......+| ..++.+++++|.+||.++|.+|.+..+++.|||.
T Consensus 200 d~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p---~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hpwI 276 (281)
T KOG0580|consen 200 DKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP---STISGGAADLISRLLVKNPIERLALTEVMDHPWI 276 (281)
T ss_pred cchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC---cccChhHHHHHHHHhccCccccccHHHHhhhHHH
Confidence 999999999999999985 8988887777777766666666 4566799999999999999999999999999997
Q ss_pred CCc
Q 001059 664 PQM 666 (1170)
Q Consensus 664 ~~~ 666 (1170)
...
T Consensus 277 ~a~ 279 (281)
T KOG0580|consen 277 VAN 279 (281)
T ss_pred Hhc
Confidence 643
|
|
| >cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=373.61 Aligned_cols=273 Identities=25% Similarity=0.407 Sum_probs=212.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|++++.||+|+||+||+|+++.+++.||||+++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~--------- 72 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQD--------- 72 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEec---------
Confidence 68999999999999999999999999999999976432 22345678899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
..++|+|||||+ |+|.+++.....+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~g 121 (381)
T cd05626 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMG 121 (381)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 599999988888999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccC----CCC------C----CC------------------CCCc
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD----AAF------P----TD------------------TGGV 561 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~----~~~------~----~~------------------~~~~ 561 (1170)
|+||||||+|||++.++++||+|||+++.+........ ... + .. ....
T Consensus 122 ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (381)
T cd05626 122 FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQ 201 (381)
T ss_pred eeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccccccccccCcccccccccccccccccchhhcccccccc
Confidence 99999999999999999999999999865421110000 000 0 00 0000
Q ss_pred cccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CCCccccCCHHHH
Q 001059 562 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQE 637 (1170)
Q Consensus 562 ~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~e~~ 637 (1170)
.....+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+...... ..+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~ 280 (381)
T cd05626 202 RCLAHSLVGTPNYIAPEVLLR-KGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAV 280 (381)
T ss_pred ccccccccCCccccCHHHHcC-CCCCCccceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHH
Confidence 001234689999999999987 568999999999999999997 88766555544444332211 1223345678999
Q ss_pred HHHHHccC--CCCCCCCCHHHHHhccCCCCchHH
Q 001059 638 SLLRRLMS--PSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 638 ~LI~~~L~--~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
+||.+|++ .+|..||++.++++|+||....+.
T Consensus 281 dli~~ll~~~~~~~~R~~~~~~l~hp~f~~~~~~ 314 (381)
T cd05626 281 DLITKLCCSAEERLGRNGADDIKAHPFFSEVDFS 314 (381)
T ss_pred HHHHHHccCcccccCCCCHHHHhcCcccCCCChh
Confidence 99999554 555569999999999999987654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po |
| >cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-38 Score=371.11 Aligned_cols=275 Identities=29% Similarity=0.461 Sum_probs=218.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||+||+|++..+|+.||||+++..... ......+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQ--------- 71 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhee---------
Confidence 4799999999999999999999999999999999754322 234567889999999999999999997763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+..++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 120 (350)
T cd05573 72 -------------------------------DEEHLYLVMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKL 120 (350)
T ss_pred -------------------------------cCCeEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCC--------------CCCCCCccccCcccccCccCCCcc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF--------------PTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
||+||||||+|||++.++.+||+|||++.............. ...............||+.|+|||
T Consensus 121 giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE 200 (350)
T cd05573 121 GFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPE 200 (350)
T ss_pred CeeccCCCHHHeEECCCCCEEeecCCCCccCcccCcccccccccccccccccccccccccccccccccccccCccccCHH
Confidence 999999999999999999999999999986543220000000 000000011223457999999999
Q ss_pred cccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh--hcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 579 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK--QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 579 ~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~--~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
++.+ ..++.++|||||||++|||++ ||...........+.. ....+|. ....++++.+||.+||. ||.+||+
T Consensus 201 ~~~~-~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~~~~~~~li~~ll~-dp~~R~~ 277 (350)
T cd05573 201 VLRG-TPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPP-DPPVSPEAIDLICRLLC-DPEDRLG 277 (350)
T ss_pred HHcC-CCCCCceeeEecchhhhhhccCCCCCCCCCHHHHHHHHhccCCcccCCC-CCCCCHHHHHHHHHHcc-ChhhcCC
Confidence 9988 578999999999999999997 8876665554444433 2223333 23367899999999997 9999999
Q ss_pred -HHHHHhccCCCCchHHHHH
Q 001059 654 -ATELLQDALPPQMEYELLD 672 (1170)
Q Consensus 654 -a~eiL~~~~~~~~~~~~~~ 672 (1170)
++++++|||+....++...
T Consensus 278 s~~~ll~hp~~~~~~~~~~~ 297 (350)
T cd05573 278 SFEEIKSHPFFKGIDWENLR 297 (350)
T ss_pred CHHHHhcCCCcCCCCHHHHh
Confidence 9999999999998766443
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the |
| >cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-38 Score=357.36 Aligned_cols=257 Identities=25% Similarity=0.391 Sum_probs=202.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~~~ 430 (1170)
++|++.+.||+|+||+||+|++.. +|+.||+|+++...........+.+|+.+++.+ +||||++++++|....
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~--- 77 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR--- 77 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEeccc---
Confidence 478999999999999999999854 478899999876544333344567788777766 6999999998874210
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......++++|||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 78 --------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~ 125 (290)
T cd07862 78 --------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDF 125 (290)
T ss_pred --------------------------------CCCCCcEEEEEccCCCCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123568999999999999988753 358999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.
T Consensus 126 lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 188 (290)
T cd07862 126 LHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQ----------------MALTSVVVTLWYRAPEVLLQ-SSYAT 188 (290)
T ss_pred HHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCC----------------cccccccccccccChHHHhC-CCCCC
Confidence 99999999999999999999999999999999754211 01234579999999999977 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-C-----------------------CccccCCHHHHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-P-----------------------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p-----------------------~~~~~~~~e~~~LI~ 641 (1170)
++|||||||++|||++ ||......+....+....+.. + ......++.+++||.
T Consensus 189 ~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 268 (290)
T cd07862 189 PVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLL 268 (290)
T ss_pred ccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHH
Confidence 9999999999999997 676655544443333211110 0 011234567789999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 001059 642 RLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+||+.||++|||+.++|+||||
T Consensus 269 ~~l~~~P~~R~s~~~~l~hp~f 290 (290)
T cd07862 269 KCLTFNPAKRISAYSALSHPYF 290 (290)
T ss_pred HHhccCchhcCCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla |
| >KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-40 Score=397.73 Aligned_cols=278 Identities=24% Similarity=0.406 Sum_probs=233.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+||+++++||+|+||.|.+++++.|++.||+|++++.... ......|..|-.+|...+.+.|++++.+|
T Consensus 74 ~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF--------- 144 (1317)
T KOG0612|consen 74 AEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF--------- 144 (1317)
T ss_pred HHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh---------
Confidence 37999999999999999999999999999999999753322 22345688899999999999999999777
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
++..++|+||||++ |+|..++.+.+++++..|++|+..|+.||.-||+
T Consensus 145 -------------------------------QD~~~LYlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~ 193 (1317)
T KOG0612|consen 145 -------------------------------QDERYLYLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHS 193 (1317)
T ss_pred -------------------------------cCccceEEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999996 5999999999999999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 587 (1170)
.|+|||||||+|||||..||+||+|||.|-.+..+. .......+|||.|.|||+|+. .+.|+
T Consensus 194 mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG--------------~V~s~~aVGTPDYISPEvLqs~~~~~g~yG 259 (1317)
T KOG0612|consen 194 MGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADG--------------TVRSSVAVGTPDYISPEVLQSQGDGKGEYG 259 (1317)
T ss_pred ccceeccCCcceeEecccCcEeeccchhHHhcCCCC--------------cEEeccccCCCCccCHHHHHhhcCCccccC
Confidence 999999999999999999999999999998764332 122355699999999999863 25699
Q ss_pred ccchhHHHHHHHHHhh---cCCCchhHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCC---HHHHHh
Q 001059 588 EKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQ 659 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELl---tPf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt---a~eiL~ 659 (1170)
+.||+||+||++|||+ |||+...-.+.+-++... ...+| ....+++++++||+++++. |..|.. ++++-.
T Consensus 260 ~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP-~~~~VSeeakdLI~~ll~~-~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 260 RECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFP-DETDVSEEAKDLIEALLCD-REVRLGRNGIEDIKN 337 (1317)
T ss_pred CccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCC-cccccCHHHHHHHHHHhcC-hhhhcccccHHHHHh
Confidence 9999999999999999 599998888877777766 34466 4455899999999999975 777877 999999
Q ss_pred ccCCCCchHHHHHHH----HHhcCCCCCccch
Q 001059 660 DALPPQMEYELLDNI----LRMMHSSEDTSIY 687 (1170)
Q Consensus 660 ~~~~~~~~~~~~~~~----~~~~~~~~d~~~~ 687 (1170)
||||.+..|+.+... ...+.++.|++.+
T Consensus 338 HpFF~g~~W~~iR~~~pP~vPevssd~DTsnF 369 (1317)
T KOG0612|consen 338 HPFFEGIDWDNIRESVPPVVPEVSSDDDTSNF 369 (1317)
T ss_pred CccccCCChhhhhhcCCCCCCcCCCCCccccc
Confidence 999999999766542 2334455555555
|
|
| >cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=371.06 Aligned_cols=275 Identities=28% Similarity=0.465 Sum_probs=215.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||++++++|.
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~--------- 71 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQ--------- 71 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE---------
Confidence 479999999999999999999999999999999975432 2233456788999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~ 120 (364)
T cd05599 72 -------------------------------DENYLYLIMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKL 120 (364)
T ss_pred -------------------------------cCCeEEEEECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2467899999996 58999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCC---------------CCCCCC--------CccccCcccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA---------------FPTDTG--------GVSVDGTGQV 569 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~---------------~~~~~~--------~~~~~~~~~~ 569 (1170)
||+||||||+|||++.++.+||+|||++..+.......... .+.... .......+.+
T Consensus 121 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (364)
T cd05599 121 GYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTV 200 (364)
T ss_pred CeEeccCCHHHeEECCCCCEEEeecccceeccccccccccccccccccccccccccccccccccccchhhcccccccccc
Confidence 99999999999999999999999999997653221100000 000000 0000112357
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~ 645 (1170)
||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+.......+ +.....++++.+||++||.
T Consensus 201 gt~~y~aPE~~~~-~~~~~~~DiwSlG~il~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~ 279 (364)
T cd05599 201 GTPDYIAPEVFLQ-TGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC 279 (364)
T ss_pred cCccccCHHHHcC-CCCCCeeeeecchhHHHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc
Confidence 9999999999987 568999999999999999997 7776655554444433222211 2223457899999999997
Q ss_pred CCCCCCCC---HHHHHhccCCCCchHHHH
Q 001059 646 PSPSDRPS---ATELLQDALPPQMEYELL 671 (1170)
Q Consensus 646 ~dP~~RPt---a~eiL~~~~~~~~~~~~~ 671 (1170)
+|.+|++ +.++++|+||....++..
T Consensus 280 -~p~~R~~~~~~~~ll~h~~~~~~~~~~~ 307 (364)
T cd05599 280 -EAERRLGNNGVNEIKSHPFFKGVDWEHI 307 (364)
T ss_pred -CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 9999998 999999999999876643
|
Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica |
| >cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-38 Score=358.28 Aligned_cols=258 Identities=27% Similarity=0.420 Sum_probs=206.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|+..+.||+|+||+||+|.++.+|+.||+|++...... ......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~--------- 71 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEcc---------
Confidence 378899999999999999999999999999998754322 2223467899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++++||||+ ++|.+.+... ..+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05631 72 -------------------------------KDALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQR 120 (285)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999997 5888777543 358999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||++....... .....+||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05631 121 ERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE----------------TVRGRVGTVGYMAPEVINN-EKYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC----------------eecCCCCCCCccCHhhhcC-CCCCcccC
Confidence 999999999999999999999999999997542110 1134579999999999987 57899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHH---HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQ---IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~---~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 660 (1170)
||||||++|||++ ||....... .....+. . .........++++.+||++||+.||.+||+ ++++++|
T Consensus 184 vwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~-~-~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 184 WWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVK-E-DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred chhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhh-c-ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 9999999999997 776543321 1111111 1 111223346679999999999999999997 9999999
Q ss_pred cCCCCchHHHHH
Q 001059 661 ALPPQMEYELLD 672 (1170)
Q Consensus 661 ~~~~~~~~~~~~ 672 (1170)
|||.+..+..+.
T Consensus 262 ~~~~~~~~~~~~ 273 (285)
T cd05631 262 PIFKNINFKRLE 273 (285)
T ss_pred HhhcCCCHHHHH
Confidence 999998766554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i |
| >KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=368.36 Aligned_cols=258 Identities=30% Similarity=0.512 Sum_probs=224.6
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~ 428 (1170)
..+...|++.+.||+|.||.||+|+++.+|+.+|+|++++.... ......+.+|+.+|+++. |||||.++++|..
T Consensus 31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~--- 107 (382)
T KOG0032|consen 31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFED--- 107 (382)
T ss_pred ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEc---
Confidence 44557899999999999999999999999999999999865532 224568999999999998 9999999999833
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||+|. |.|.+.+... .+++..+..++.||+.+++
T Consensus 108 -------------------------------------~~~~~lvmEL~~GGeLfd~i~~~-~~sE~da~~~~~~il~av~ 149 (382)
T KOG0032|consen 108 -------------------------------------PDSVYLVMELCEGGELFDRIVKK-HYSERDAAGIIRQILEAVK 149 (382)
T ss_pred -------------------------------------CCeEEEEEEecCCchHHHHHHHc-cCCHHHHHHHHHHHHHHHH
Confidence 457899999996 6899988766 4999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCC----CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
|||+.||+||||||+|+|+... +.+|++|||+|....... .....+|||.|+|||++..
T Consensus 150 ~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~----------------~~~~~~Gtp~y~APEvl~~- 212 (382)
T KOG0032|consen 150 YLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGE----------------RLHTIVGTPEYVAPEVLGG- 212 (382)
T ss_pred HHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCc----------------eEeeecCCccccCchhhcC-
Confidence 9999999999999999999653 479999999999764311 2355799999999999997
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..|+..+||||+||++|.|++ ||....+......+......++ +.|..++..++++|++||..||.+|+|+.++|+
T Consensus 213 ~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 213 RPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred CCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 569999999999999999986 9999888888888877666654 578888999999999999999999999999999
Q ss_pred ccCCCCc
Q 001059 660 DALPPQM 666 (1170)
Q Consensus 660 ~~~~~~~ 666 (1170)
|||....
T Consensus 293 HpWi~~~ 299 (382)
T KOG0032|consen 293 HPWIKSI 299 (382)
T ss_pred CccccCC
Confidence 9997765
|
|
| >cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=363.40 Aligned_cols=248 Identities=25% Similarity=0.394 Sum_probs=206.2
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||+|+||+||+|+++.+++.||+|+++... ........+.+|+.+|+.++||||++++++|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~----------------- 63 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQ----------------- 63 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEe-----------------
Confidence 799999999999999999999999997532 22334567889999999999999999998773
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
....+|+|||||+ ++|.+++.....+++..+..++.||+.||+|||++||+|||||
T Consensus 64 -----------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlk 120 (312)
T cd05585 64 -----------------------SPEKLYLVLAFINGGELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLK 120 (312)
T ss_pred -----------------------cCCeEEEEEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCC
Confidence 2457899999997 5999999888889999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 121 p~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslGvil~ 184 (312)
T cd05585 121 PENILLDYQGHIALCDFGLCKLNMKDD---------------DKTNTFCGTPEYLAPELLLG-HGYTKAVDWWTLGVLLY 184 (312)
T ss_pred HHHeEECCCCcEEEEECcccccCccCC---------------CccccccCCcccCCHHHHcC-CCCCCccceechhHHHH
Confidence 999999999999999999987532110 01234579999999999987 56899999999999999
Q ss_pred Hhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCchHH
Q 001059 601 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEYE 669 (1170)
Q Consensus 601 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~ 669 (1170)
||++ ||......+...........+| ...++++.+||.+||+.||.+|| ++.++++||||.+..+.
T Consensus 185 el~tg~~pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~~~~ 256 (312)
T cd05585 185 EMLTGLPPFYDENVNEMYRKILQEPLRFP---DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQLSWK 256 (312)
T ss_pred HHHhCCCCcCCCCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCCCHH
Confidence 9997 8876655555544444333333 34567899999999999999997 58999999999987543
|
Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl |
| >cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-38 Score=372.60 Aligned_cols=275 Identities=27% Similarity=0.447 Sum_probs=212.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|.++.+|+.||||++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~-------- 72 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQD-------- 72 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEc--------
Confidence 479999999999999999999999999999999865322 22334578889999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
..++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~ 120 (377)
T cd05629 73 --------------------------------AQYLYLIMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKL 120 (377)
T ss_pred --------------------------------CCeeEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhcccccccc--------CCCCCC---------CCC---------------C
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ--------DAAFPT---------DTG---------------G 560 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~--------~~~~~~---------~~~---------------~ 560 (1170)
||+||||||+|||++.++.+||+|||+++.+....... ...... ... .
T Consensus 121 givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (377)
T cd05629 121 GFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKN 200 (377)
T ss_pred CeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhc
Confidence 99999999999999999999999999997432211000 000000 000 0
Q ss_pred ccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHH
Q 001059 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQ 636 (1170)
Q Consensus 561 ~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~ 636 (1170)
......+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+......+. +.....++++
T Consensus 201 ~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~ 279 (377)
T cd05629 201 RRLMAYSTVGTPDYIAPEIFLQ-QGYGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEA 279 (377)
T ss_pred ccccccccCCCccccCHHHHcc-CCCCCceeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHH
Confidence 0001123579999999999987 568999999999999999997 7766555444443332111111 2233467899
Q ss_pred HHHHHHccCCCCCCC---CCHHHHHhccCCCCchHHHH
Q 001059 637 ESLLRRLMSPSPSDR---PSATELLQDALPPQMEYELL 671 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~R---Pta~eiL~~~~~~~~~~~~~ 671 (1170)
++||.+||. +|.+| +++.++++|+|+....++.+
T Consensus 280 ~dli~~lL~-~~~~r~~r~~~~~~l~hp~~~~~~~~~~ 316 (377)
T cd05629 280 EDLIRRLIT-NAENRLGRGGAHEIKSHPFFRGVDWDTI 316 (377)
T ss_pred HHHHHHHhc-CHhhcCCCCCHHHHhcCCCcCCCCHHHH
Confidence 999999998 66665 69999999999998876554
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of |
| >KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=368.42 Aligned_cols=243 Identities=29% Similarity=0.459 Sum_probs=199.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.+.+++.||+|.||+||+|.+. ....||+|.++....+ .+.|.+|+++|++|+|+|||+++++|..
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~-~~~~vavk~ik~~~m~---~~~f~~Ea~iMk~L~H~~lV~l~gV~~~--------- 272 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWN-GSTKVAVKTIKEGSMS---PEAFLREAQIMKKLRHEKLVKLYGVCTK--------- 272 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEc-CCCcccceEEeccccC---hhHHHHHHHHHHhCcccCeEEEEEEEec---------
Confidence 45677889999999999999997 3348999999865333 4678999999999999999999999833
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+||||||++ |+|.++|.. ...+..++.+.++.|||+||+||++
T Consensus 273 -------------------------------~~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes 321 (468)
T KOG0197|consen 273 -------------------------------QEPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLES 321 (468)
T ss_pred -------------------------------CCceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHh
Confidence 236899999997 899999986 4569999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+++|||||-.+|||++++..+||+|||+|+....+.+.. ..+..-..-|.|||++.. ..++.|||
T Consensus 322 ~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~--------------~~~~kfPIkWtAPEa~~~-~~FS~kSD 386 (468)
T KOG0197|consen 322 KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA--------------SEGGKFPIKWTAPEALNY-GKFSSKSD 386 (468)
T ss_pred CCccchhhhhhheeeccCceEEEcccccccccCCCceee--------------cCCCCCCceecCHHHHhh-CCcccccc
Confidence 999999999999999999999999999999544332211 112233457999999987 67999999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
||||||+||||+| |+......+. +..+. .+...+.+..+++++.++|..||..+|++|||++.+.
T Consensus 387 VWSFGVlL~E~fT~G~~py~~msn~ev-~~~le-~GyRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~ 455 (468)
T KOG0197|consen 387 VWSFGVLLWELFTYGRVPYPGMSNEEV-LELLE-RGYRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLR 455 (468)
T ss_pred eeehhhhHHHHhccCCCCCCCCCHHHH-HHHHh-ccCcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence 9999999999997 6655554444 44444 4444445567889999999999999999999999665
|
|
| >PTZ00036 glycogen synthase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-38 Score=378.96 Aligned_cols=258 Identities=23% Similarity=0.342 Sum_probs=202.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||+|+||.||+|.+..+++.||||++.... ....+|+.+|+.++|||||+++++|.....
T Consensus 66 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~------ 133 (440)
T PTZ00036 66 KSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP------QYKNRELLIMKNLNHINIIFLKDYYYTECF------ 133 (440)
T ss_pred CeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc------chHHHHHHHHHhcCCCCCcceeeeEeeccc------
Confidence 57999999999999999999999999999999885322 234579999999999999999987743210
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.......++++|||||+++|.+++. ....+++..++.++.||+.||+|||
T Consensus 134 --------------------------~~~~~~~~l~lvmE~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH 187 (440)
T PTZ00036 134 --------------------------KKNEKNIFLNVVMEFIPQTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH 187 (440)
T ss_pred --------------------------ccCCCceEEEEEEecCCccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0011235688999999998877764 3456999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
++||+||||||+|||++.++ .+||+|||+|+.+.... .....+||+.|+|||++.+...|+.+
T Consensus 188 ~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~~ 251 (440)
T PTZ00036 188 SKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQ----------------RSVSYICSRFYRAPELMLGATNYTTH 251 (440)
T ss_pred HCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCC----------------CcccCCCCcCccCHHHhcCCCCCCcH
Confidence 99999999999999999665 69999999998653211 12345789999999998775568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-----------------CCC---------ccccCCHHHHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LPP---------SWVAKFSEQESLL 640 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p~---------~~~~~~~e~~~LI 640 (1170)
+|||||||++|||++ ||......+....++...+. +|. .....++++.+||
T Consensus 252 ~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li 331 (440)
T PTZ00036 252 IDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFI 331 (440)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHH
Confidence 999999999999997 77655444333333221110 110 0112456899999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.+||+.||.+|||+.++|+||||...
T Consensus 332 ~~~L~~dP~~R~ta~e~l~hp~f~~~ 357 (440)
T PTZ00036 332 SQFLKYEPLKRLNPIEALADPFFDDL 357 (440)
T ss_pred HHHCCCChhHCcCHHHHhCChhHHhh
Confidence 99999999999999999999998654
|
|
| >cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-38 Score=364.59 Aligned_cols=251 Identities=25% Similarity=0.367 Sum_probs=207.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+.||+|+||.||+|+++.+|+.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------------- 65 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQ--------------- 65 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEE---------------
Confidence 369999999999999999999999999975432 2234467889999999999999999998773
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....+|+||||++ ++|...+.....+++.+++.++.||+.||+|||++||+|||
T Consensus 66 -------------------------~~~~~~lv~Ey~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrD 120 (328)
T cd05593 66 -------------------------TKDRLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRD 120 (328)
T ss_pred -------------------------cCCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecc
Confidence 2457899999997 58988888888899999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGvi 184 (328)
T cd05593 121 LKLENLMLDKDGHIKITDFGLCKEGITDA---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (328)
T ss_pred cCHHHeEECCCCcEEEecCcCCccCCCcc---------------cccccccCCcCccChhhhcC-CCCCccCCccccchH
Confidence 99999999999999999999987532110 01234579999999999987 568999999999999
Q ss_pred HHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHHH
Q 001059 599 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 670 (1170)
+|+|++ ||......+....+......+|. ..++++.+||++||+.||.+|| ++.++++|+||....+..
T Consensus 185 l~elltG~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~~ 261 (328)
T cd05593 185 MYEMMCGRLPFYNQDHEKLFELILMEDIKFPR---TLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGVNWQD 261 (328)
T ss_pred HHHHhhCCCCCCCCCHHHHHHHhccCCccCCC---CCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCCCHHH
Confidence 999997 88765555444444333333333 4567999999999999999997 899999999999877653
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate |
| >cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-38 Score=364.15 Aligned_cols=251 Identities=26% Similarity=0.372 Sum_probs=208.2
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~-------------- 66 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT-------------- 66 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEec--------------
Confidence 369999999999999999999999999975322 22334567889999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~D 120 (323)
T cd05595 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRD 120 (323)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecC
Confidence 357899999997 58988888888899999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 lkp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvi 184 (323)
T cd05595 121 IKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGVV 184 (323)
T ss_pred CCHHHEEEcCCCCEEecccHHhccccCCC---------------CccccccCCcCcCCcccccC-CCCCchhchhhhHHH
Confidence 99999999999999999999987431110 01134579999999999987 568999999999999
Q ss_pred HHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHHH
Q 001059 599 FFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~~ 670 (1170)
+|||++ ||..................+|. ..++++.+||.+||+.||.+|| ++.++++|+||.+..+..
T Consensus 185 l~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~~~~~ 261 (323)
T cd05595 185 MYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQD 261 (323)
T ss_pred HHHHHhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCCCHHH
Confidence 999997 88766555544444433333443 4567999999999999999998 999999999999887553
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in |
| >KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.6e-40 Score=371.60 Aligned_cols=256 Identities=26% Similarity=0.385 Sum_probs=214.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+++..||.|+||+||+|.++.++-..|.|+|.. .+.+..++++-|+.+|+.+.||+||+++++|+-
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet--kseEELEDylVEIeILa~CdHP~ivkLl~ayy~--------- 100 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET--KSEEELEDYLVEIEILAECDHPVIVKLLSAYYF--------- 100 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc--cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc---------
Confidence 467899999999999999999999999999999864 445677889999999999999999999988742
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCc-HHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFE-SYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gs-L~~~l~-~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+||..|||+|+ ...++- -...+++.++..+++|++.||.|||++
T Consensus 101 -------------------------------enkLwiliEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~ 149 (1187)
T KOG0579|consen 101 -------------------------------ENKLWILIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQ 149 (1187)
T ss_pred -------------------------------cCceEEEEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhc
Confidence 45789999999864 444443 455799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 588 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 588 (1170)
+|||||||..|||++-+|.++|+|||.+....... -...+++|||+|||||+... ...|+.
T Consensus 150 ~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~---------------qkRDsFIGTPYWMAPEVvmCET~KD~PYDy 214 (1187)
T KOG0579|consen 150 NIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTR---------------QKRDSFIGTPYWMAPEVVMCETFKDQPYDY 214 (1187)
T ss_pred chhhhhccccceEEEecCcEeeecccccccchhHH---------------hhhccccCCcccccchheeeccccCCCchh
Confidence 99999999999999999999999999987543211 12356899999999998754 245999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||+|.||.. |.....++...+++....++..-.+...+..+.+|+++||.+||..||++.++|+|||+.+
T Consensus 215 kaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~ 294 (1187)
T KOG0579|consen 215 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQN 294 (1187)
T ss_pred hhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhhCccccc
Confidence 9999999999999985 6667777777777776554433344455568999999999999999999999999999986
Q ss_pred ch
Q 001059 666 ME 667 (1170)
Q Consensus 666 ~~ 667 (1170)
..
T Consensus 295 ~~ 296 (1187)
T KOG0579|consen 295 AP 296 (1187)
T ss_pred CC
Confidence 54
|
|
| >cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-38 Score=367.02 Aligned_cols=260 Identities=28% Similarity=0.385 Sum_probs=205.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 93 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK----- 93 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC-----
Confidence 468999999999999999999999999999999999755444445667889999999999999999998874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|++|||++++|.+.+.. .+++..+..++.||+.||+|||++
T Consensus 94 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~~L~~LH~~ 142 (359)
T cd07876 94 -----------------------------SLEEFQDVYLVMELMDANLCQVIHM--ELDHERMSYLLYQMLCGIKHLHSA 142 (359)
T ss_pred -----------------------------CccccceeEEEEeCCCcCHHHHHhc--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0112346899999999988887643 488999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... ...+...||+.|+|||++.+ ..++.++||
T Consensus 143 ~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 205 (359)
T cd07876 143 GIIHRDLKPSNIVVKSDCTLKILDFGLARTACTN----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 205 (359)
T ss_pred CcccCCCCHHHEEECCCCCEEEecCCCccccccC----------------ccCCCCcccCCCCCchhccC-CCCCcchhh
Confidence 9999999999999999999999999999753211 01234578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhh----------------------hcCCCCC-----------------ccc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLK----------------------QKGELPP-----------------SWV 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~----------------------~~~~~p~-----------------~~~ 630 (1170)
|||||++|+|++ ||.............. .....+. ...
T Consensus 206 wSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (359)
T cd07876 206 WSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDK 285 (359)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhcccccccccccccc
Confidence 999999999997 7764432221111100 0111100 001
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
..++++++||.+||+.||++|||+.++|+|||+..
T Consensus 286 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~ 320 (359)
T cd07876 286 LKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 320 (359)
T ss_pred ccchhHHHHHHHHhccCcccCCCHHHHhcCchhhh
Confidence 12457899999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >PHA03212 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-38 Score=372.27 Aligned_cols=252 Identities=21% Similarity=0.312 Sum_probs=200.9
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++++.||+|+||.||+|++..+++.||+|... ...+.+|+.+|+.++||||++++++|..
T Consensus 89 ~~~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~--------~~~~~~E~~il~~l~HpnIv~~~~~~~~------ 154 (391)
T PHA03212 89 IEKAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ--------RGGTATEAHILRAINHPSIIQLKGTFTY------ 154 (391)
T ss_pred cccCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh--------hhhhHHHHHHHHhCCCCCCCCEeEEEEE------
Confidence 34568999999999999999999999999999999653 2346789999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....+++||++.++|..++.....+++..++.++.||+.||+|||+
T Consensus 155 ----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~ 200 (391)
T PHA03212 155 ----------------------------------NKFTCLILPRYKTDLYCYLAAKRNIAICDILAIERSVLRAIQYLHE 200 (391)
T ss_pred ----------------------------------CCeeEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3567999999999999999888889999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+|+...... .......+||+.|+|||++.+ ..++.++|
T Consensus 201 ~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 265 (391)
T PHA03212 201 NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN--------------ANKYYGWAGTIATNAPELLAR-DPYGPAVD 265 (391)
T ss_pred CCcccCCCChHhEEEcCCCCEEEEeCCccccccccc--------------ccccccccCccCCCChhhhcC-CCCCcHHH
Confidence 999999999999999999999999999997532110 001234579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchh-------HHHHHHHHhhhcCC--------------------------CC---Ccc---
Q 001059 592 MYSLGIVFFELWH---PFSTAM-------ERQIVLSDLKQKGE--------------------------LP---PSW--- 629 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~-------~~~~~~~~l~~~~~--------------------------~p---~~~--- 629 (1170)
||||||++|||++ ||.... .......++...+. .+ +.+
T Consensus 266 iwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (391)
T PHA03212 266 IWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNL 345 (391)
T ss_pred HHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHH
Confidence 9999999999997 443211 00111111110110 00 011
Q ss_pred ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 630 ~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
...+.++.+||.+||+.||.+|||+.++|+|+||...
T Consensus 346 ~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~ 382 (391)
T PHA03212 346 YELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDI 382 (391)
T ss_pred hhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccC
Confidence 1234578899999999999999999999999999764
|
|
| >cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-38 Score=370.67 Aligned_cols=272 Identities=25% Similarity=0.426 Sum_probs=212.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|++++.||+|+||+||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~--------- 72 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQD--------- 72 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEe---------
Confidence 68999999999999999999999999999999975432 22344578899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||++|
T Consensus 73 -------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ 121 (382)
T cd05625 73 -------------------------------KDNLYFVMDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMG 121 (382)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 457899999996 589999988888999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhcccccccc---CC--------CCCCC---------------------CCCc
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ---DA--------AFPTD---------------------TGGV 561 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~---~~--------~~~~~---------------------~~~~ 561 (1170)
|+||||||+|||++.++++||+|||+|+.+....... .. .+... ....
T Consensus 122 ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (382)
T cd05625 122 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQ 201 (382)
T ss_pred eecCCCCHHHEEECCCCCEEEeECCCCccccccccccccccccccccccccccccccccccccccccccchhhhhccccc
Confidence 9999999999999999999999999986432110000 00 00000 0000
Q ss_pred cccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHH
Q 001059 562 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQE 637 (1170)
Q Consensus 562 ~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~ 637 (1170)
.....+.+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+....... .+.....++++.
T Consensus 202 ~~~~~~~~gt~~Y~aPE~~~~-~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~ 280 (382)
T cd05625 202 RCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEAS 280 (382)
T ss_pred cccccccccCcccCCHHHhcC-CCCCCeeeEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHH
Confidence 001234579999999999987 568999999999999999997 887666555554444322221 223345678999
Q ss_pred HHHHHccCCCCCCCCC---HHHHHhccCCCCchHH
Q 001059 638 SLLRRLMSPSPSDRPS---ATELLQDALPPQMEYE 669 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPt---a~eiL~~~~~~~~~~~ 669 (1170)
++|.+|+ .+|.+|++ +.++++||||....+.
T Consensus 281 ~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~~~~ 314 (382)
T cd05625 281 DLIIKLC-RGPEDRLGKNGADEIKAHPFFKTIDFS 314 (382)
T ss_pred HHHHHHc-cCHhHcCCCCCHHHHhcCCCcCCcChH
Confidence 9999976 59999997 9999999999887654
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an |
| >cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-38 Score=369.49 Aligned_cols=263 Identities=27% Similarity=0.374 Sum_probs=209.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||+||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++....
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~-------- 72 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPH-------- 72 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCC--------
Confidence 578899999999999999999999999999998654444344567899999999999999999998873321
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
......+|++|||++++|.+.+.....+++..++.++.||+.||+|||++||+
T Consensus 73 ---------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~iv 125 (372)
T cd07853 73 ---------------------------IDPFEEIYVVTELMQSDLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGIL 125 (372)
T ss_pred ---------------------------ccccceEEEEeeccccCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 00123689999999999999988888899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|||++.++.+||+|||+++...... ....+...+|+.|+|||++.+...++.++|||||
T Consensus 126 H~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diwsl 191 (372)
T cd07853 126 HRDIKPGNLLVNSNCVLKICDFGLARVEEPDE--------------SKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSV 191 (372)
T ss_pred CCCCChHHEEECCCCCEEeccccceeecccCc--------------cccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhH
Confidence 99999999999999999999999998542111 0112345789999999999875568999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhh----------------------hcCCCCC-------ccccCCHHHHHHHHHc
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLK----------------------QKGELPP-------SWVAKFSEQESLLRRL 643 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~----------------------~~~~~p~-------~~~~~~~e~~~LI~~~ 643 (1170)
||++|||++ ||...........+.. .....++ .....++++.+||.+|
T Consensus 192 G~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~m 271 (372)
T cd07853 192 GCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRM 271 (372)
T ss_pred HHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHh
Confidence 999999997 7765443322211111 1111111 1123467889999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 001059 644 MSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|+.||.+|||+.++++|||+....
T Consensus 272 L~~dP~~R~t~~e~l~hp~~~~~~ 295 (372)
T cd07853 272 LVFDPDKRISAADALAHPYLDEGR 295 (372)
T ss_pred CCCChhhCcCHHHHhcCHhhCCCc
Confidence 999999999999999999998764
|
Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription |
| >KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-39 Score=352.32 Aligned_cols=255 Identities=28% Similarity=0.426 Sum_probs=205.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|+..+++|.|+||.||+|....+++.||||+.-.... --.+|+++|+.++|||||++..+|..+.
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r------~knrEl~im~~l~HpNIV~L~~~f~~~~-------- 90 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR------YKNRELQIMRKLDHPNIVRLLYFFSSST-------- 90 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC------cCcHHHHHHHhcCCcCeeeEEEEEEecC--------
Confidence 57788999999999999999999999999998753221 2347999999999999999998885431
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
. .+..++.+||||+|.+|.+.++. ..+++.-.++-|++||++||+|||+
T Consensus 91 --------------------------~-~d~~~lnlVleymP~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~ 143 (364)
T KOG0658|consen 91 --------------------------E-SDEVYLNLVLEYMPETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHS 143 (364)
T ss_pred --------------------------C-CchhHHHHHHHhchHHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHh
Confidence 0 12457789999999999999875 4678888999999999999999999
Q ss_pred CCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 512 QGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
.||+||||||+|+|+|.+ |.+||||||.|+.+...+ ...++.-|..|.|||.+.|...|+.+.
T Consensus 144 ~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~e----------------pniSYicSRyYRaPELifga~~Yt~~I 207 (364)
T KOG0658|consen 144 HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGE----------------PNISYICSRYYRAPELIFGATEYTTSI 207 (364)
T ss_pred cCcccCCCChheEEEcCCCCeEEeccCCcceeeccCC----------------CceeEEEeccccCHHHHcCccccCcee
Confidence 999999999999999987 899999999999875433 125667899999999999988999999
Q ss_pred hhHHHHHHHHHhhc--CC-CchhHHHHHHHHhhhcCC-----------------CC----C-----ccccCCHHHHHHHH
Q 001059 591 DMYSLGIVFFELWH--PF-STAMERQIVLSDLKQKGE-----------------LP----P-----SWVAKFSEQESLLR 641 (1170)
Q Consensus 591 DIwSlGviL~ELlt--Pf-~~~~~~~~~~~~l~~~~~-----------------~p----~-----~~~~~~~e~~~LI~ 641 (1170)
||||.||++.||+. |. .+.+.......++..-|. .| . .....++++.+|+.
T Consensus 208 DiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~ 287 (364)
T KOG0658|consen 208 DIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLS 287 (364)
T ss_pred EEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHH
Confidence 99999999999995 43 333333333222221110 11 1 12345678999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
++|..+|.+|.++.++++|+||....
T Consensus 288 ~~L~Y~P~~R~~~~~~l~h~fFdelr 313 (364)
T KOG0658|consen 288 KLLQYSPSKRLSALEALAHPFFDELR 313 (364)
T ss_pred HHhccChhhcCCHHHHhcchhhHHhh
Confidence 99999999999999999999887654
|
|
| >PRK12305 thrS threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=384.59 Aligned_cols=350 Identities=13% Similarity=0.100 Sum_probs=270.7
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|+.||+|.++.+++.|++.++++|.++||++|.||+| ++. ++.+...++||+|.|.+|+.++|||+.|+++
T Consensus 194 ~~~G~~~~~p~~~~~~~~l~~~~~~~~~~~Gy~ev~tP~le~~~l~~~sg~~~~~~~~my~~~d~~~~~~~LRP~~~~~~ 273 (575)
T PRK12305 194 IGPGLPVWHPKGAIIRREIEDYLRKEHLKRGYEFVYTPHIGKSDLWKTSGHLDNYKENMFPPMEIDEEEYYLKPMNCPGH 273 (575)
T ss_pred cCCcceEEeccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCCcccchhhcccccccCCceEEEecCCCHHH
Confidence 4789999999999999999999999999999999999999 332 3355778999999999999999999888888
Q ss_pred HHHHHhCC----CCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcce
Q 001059 788 IRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~~----~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~~ 856 (1170)
+|+++++. ..|+|+||+|+|||+|+++ .|.|||+|+|+|+||.++..+| +|+|.++.++++.||+++ +
T Consensus 274 ~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~~~~if~~~~~~~~e~~e~i~l~~~~~~~lgl~~-~ 352 (575)
T PRK12305 274 ILIYKSRLRSYRDLPLRLAEFGTVYRYEKSGVLHGLTRVRGFTQDDAHIFCTPDQIEDEILKVLDFVLELLKDFGFKD-Y 352 (575)
T ss_pred HHHHhcccCChhhCCHhhEEecccccCCCCCCCcCcccccCeEEcceEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-E
Confidence 99988743 3599999999999999885 2567899999999999888887 999999999999999985 9
Q ss_pred EEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCCh
Q 001059 857 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAA 936 (1170)
Q Consensus 857 ~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~ 936 (1170)
++.||++.+ ..+ +|-.+.|... .+.+..
T Consensus 353 ~i~l~~r~~-~~~---~g~~~~~~~~---------------------------------------~~~l~~--------- 380 (575)
T PRK12305 353 YLELSTREP-EKY---VGDDEVWEKA---------------------------------------TEALRE--------- 380 (575)
T ss_pred EEEEeCCCh-hhc---cCCHHHHHHH---------------------------------------HHHHHH---------
Confidence 999999765 221 2322111000 000000
Q ss_pred hhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEec-cCCCccccccccee----ccc
Q 001059 937 DQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSV-KEKYPATLVEGTLL----AVG 1011 (1170)
Q Consensus 937 ~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~-~~~~~~~~~~~~~I----~~G 1011 (1170)
.+...|+. ...+.+ +.+||. ..|++... ..+.. -+.+++ ..|
T Consensus 381 ------------------------~l~~~g~~--~~~~~~---~~~~y~-~~~~~~~~d~~g~~---~~~~t~~~~~~~~ 427 (575)
T PRK12305 381 ------------------------ALEELGLE--YVEDPG---GAAFYG-PKIDVQIKDALGRE---WQMSTIQLDFNLP 427 (575)
T ss_pred ------------------------HHHhcCCC--cEecCC---Cccccc-ccEEEEeeccCCCc---eeccceeeecccH
Confidence 11222332 234444 778885 55777443 22321 111223 356
Q ss_pred cccch-hhhhcccccccccCCCCCCCCce---EEeccHHHHHhhccC--CCCCCCCCCCceEEEEEcCCCccHHHHHHHH
Q 001059 1012 GRYDY-LLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYPV--DFKPVRNEAGTSVLVCSRGGGGLLVERMELV 1085 (1170)
Q Consensus 1012 GRYD~-L~~~fg~~~~~~~~g~~~~~pAv---GfaiglerL~~~L~~--~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia 1085 (1170)
+|||- +.+ ..|. ...|++ |++-++|||+.+|.+ +...+...+|.+|+|++.+ ++...+|.+++
T Consensus 428 ~~fdl~y~~---------~~~~-~~~p~~ih~~~~G~~eRl~~~l~e~~~~~~p~~~~p~~v~Ii~~~-~~~~~~a~~i~ 496 (575)
T PRK12305 428 ERFDLEYTA---------EDGK-RQRPVMIHRALFGSIERFIGILTEHYAGAFPFWLAPVQVVIIPVA-DAHNEYAEEVA 496 (575)
T ss_pred hhCCCEEEC---------CCCC-ccCceEEEccccccHHHHHHHHHHHhCCCCCCCCCCccEEEEEeC-hHHHHHHHHHH
Confidence 89994 422 2222 235888 777789999999853 2222222567899999996 66788999999
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1086 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1086 ~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+.||+.|++|++++. +.++++++++|++.|+|++|++|++|.++|+|+||||.+++|..++++++++.|++.+++
T Consensus 497 ~~Lr~~gi~v~~d~~-~~~l~kk~~~A~~~g~p~~iivG~~E~~~~~v~vr~~~~~~q~~v~~~~l~~~l~~~~~~ 571 (575)
T PRK12305 497 KKLRAAGIRVEVDTS-NERLNKKIRNAQKQKIPYMLVVGDKEVEAGTVSVRTRDGEQLNGMPLDEFIELIKEKIAE 571 (575)
T ss_pred HHHHHCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEechhhhCCEEEEEEcCCCceeeeeHHHHHHHHHHHHhc
Confidence 999999999998876 678999999999999999999999999999999999999999999999999999888765
|
|
| >cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-38 Score=371.11 Aligned_cols=275 Identities=24% Similarity=0.406 Sum_probs=213.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||.||+|+++.+|+.||||++..... .......+.+|+.+|+.++||||+++++.|.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~-------- 72 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQD-------- 72 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEc--------
Confidence 479999999999999999999999999999999864322 11234568899999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (376)
T cd05598 73 --------------------------------KDNLYFVMDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKM 120 (376)
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhcccccccc---------C--CCCCCC-----------------CCCcccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQ---------D--AAFPTD-----------------TGGVSVD 564 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~---------~--~~~~~~-----------------~~~~~~~ 564 (1170)
||+||||||+|||++.++.+||+|||+|..+....... . ...+.. .......
T Consensus 121 ~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (376)
T cd05598 121 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCL 200 (376)
T ss_pred CeEeCCCCHHHEEECCCCCEEEEeCCCCccccccccccccccccccccccccccccccccccccccchhhhhhhhccccc
Confidence 99999999999999999999999999986432100000 0 000000 0000011
Q ss_pred CcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHH
Q 001059 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLL 640 (1170)
Q Consensus 565 ~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI 640 (1170)
..+.+||+.|||||++.+ ..++.++|||||||++|||++ ||......+....+....... .+.....++++.++|
T Consensus 201 ~~~~~gt~~y~aPE~~~~-~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li 279 (376)
T cd05598 201 AHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLI 279 (376)
T ss_pred ccccCCCccccCHHHHcC-CCCCcceeeeeccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHH
Confidence 234689999999999987 568999999999999999997 887666554444333222221 223345678999999
Q ss_pred HHccCCCCCCCC---CHHHHHhccCCCCchHHHH
Q 001059 641 RRLMSPSPSDRP---SATELLQDALPPQMEYELL 671 (1170)
Q Consensus 641 ~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~~~ 671 (1170)
.+|+ .+|.+|+ ++.++++|+||....+...
T Consensus 280 ~~l~-~~p~~R~~~~t~~ell~h~~~~~~~~~~~ 312 (376)
T cd05598 280 LRLC-CGAEDRLGKNGADEIKAHPFFKGIDFASL 312 (376)
T ss_pred HHHh-cCHhhcCCCCCHHHHhCCCCcCCCCHHHH
Confidence 9976 5999999 9999999999999876543
|
Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. |
| >PRK12444 threonyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=388.03 Aligned_cols=352 Identities=12% Similarity=0.073 Sum_probs=277.3
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
+...|+++|+|.+..+++.|++.+++.+.++||++|.||+| ++. ++.+.+.++|| +.|.+|+.++|||+.|++
T Consensus 261 ~~~~G~~~~~p~g~~~~~~i~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sG~~~~~~~emy-~~d~~~~~~~LrP~~~~~ 339 (639)
T PRK12444 261 EEAPGMPFYLPKGQIIRNELEAFLREIQKEYNYQEVRTPFMMNQELWERSGHWDHYKDNMY-FSEVDNKSFALKPMNCPG 339 (639)
T ss_pred cccCcceEEeeCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhcCChhhhhhhcC-eecCCCcEEEEccCCCHH
Confidence 45789999999999999999999999999999999999999 222 33557789999 889999999999999999
Q ss_pred HHHHHHhC----CCCceeEEEecCeEEcCCCC---C--CCCceeEeEEEEeCCCCcccHHH---HHHHHHHHHHHcCCCc
Q 001059 787 FIRWAISN----QKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 787 iaR~~~~~----~~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aDaE---vi~la~~~l~~lgi~~ 854 (1170)
++|++... +..|+|+||+|+|||+|+++ + |.|+|+|.|+++||..+. +++| ++.++.++++.||++
T Consensus 340 ~~~~~~~~~~sy~~LP~r~~~~g~~fR~E~~~~~~Gl~R~reF~q~d~~~f~~~~~-~~~e~~~~~~~~~~i~~~lgl~- 417 (639)
T PRK12444 340 HMLMFKNKLHSYRELPIRMCEFGQVHRHEFSGALNGLLRVRTFCQDDAHLFVTPDQ-IEDEIKSVMAQIDYVYKTFGFE- 417 (639)
T ss_pred HHHHHhCcccChhhCCceeEEeccccCCCCCcCCcCcceeeeeEEccEEEECCHHH-HHHHHHHHHHHHHHHHHHcCCc-
Confidence 99988653 23599999999999999876 3 566799999999998766 6666 999999999999993
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
+.+.++++. -+.+|-++.|.... +.+..
T Consensus 418 -~~~~~~~r~-----~~~~G~~e~~~~~~---------------------------------------~~l~~------- 445 (639)
T PRK12444 418 -YEVELSTRP-----EDSMGDDELWEQAE---------------------------------------ASLEN------- 445 (639)
T ss_pred -EEEEEECCc-----cccCCCHHHHHHHH---------------------------------------HHHHH-------
Confidence 999998852 12234332221100 00000
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
.|...|+ .+.+|++ ||. || |++|++.....+ .+...|+||||
T Consensus 446 --------------------------~l~~~~~--~y~~~~~--~ga-~Y-~~~~e~~~~~~~------~~~~~~~t~~~ 487 (639)
T PRK12444 446 --------------------------VLQSLNY--KYRLNEG--DGA-FY-GPKIDFHIKDAL------NRSHQCGTIQL 487 (639)
T ss_pred --------------------------HHHHcCC--CceeccC--Ccc-cc-cceEEEEeecCC------CChhcccceee
Confidence 2333444 3677877 888 99 999999876432 23479999999
Q ss_pred ch-hhhhcccccccccCCCCCCCCceE---EeccHHHHHhhccC--CCCCCCCCCCceEEEEEcCCC-ccHHHHHHHHHH
Q 001059 1015 DY-LLHRMWDREYVGYASRTNPPSGVG---ASLALETIIQHYPV--DFKPVRNEAGTSVLVCSRGGG-GLLVERMELVAE 1087 (1170)
Q Consensus 1015 D~-L~~~fg~~~~~~~~g~~~~~pAvG---faiglerL~~~L~~--~~~~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~ 1087 (1170)
|. |.++|+-. +....| +...|++| |+.++|||+.+|.+ +...+...+|.+|+|++.+ + ....+|+++++.
T Consensus 488 d~~~~~~f~l~-~~~~~g-~~~~P~i~~~~~~g~ieRli~~L~e~~~~~~p~~~ap~qV~Ii~~~-~~~~~~~a~~la~~ 564 (639)
T PRK12444 488 DFQMPEKFDLN-YIDEKN-EKRRPVVIHRAVLGSLDRFLAILIEHFGGAFPAWLAPVQVKVIPVS-NAVHVQYADEVADK 564 (639)
T ss_pred ecccccccceE-EECCCC-CccccEEEEECCCCCHHHHHHHHHHhcCCCCCCccCCceEEEEEcc-cHHHHHHHHHHHHH
Confidence 99 33444321 122233 23479999 77799999988742 1222223468899999986 5 578899999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1088 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1088 LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
||+.|++|+++.. ++++++++++|++.|+|++|+||++|+++|+|+||++++++|..++++++++.+.+.+++
T Consensus 565 LR~~Gi~veid~~-~~sl~kq~k~A~k~g~~~~iiiG~~E~~~~~v~vr~~~t~~q~~i~l~el~~~l~~~~~~ 637 (639)
T PRK12444 565 LAQAGIRVERDER-DEKLGYKIREAQMQKIPYVLVIGDKEMENGAVNVRKYGEEKSEVIELDMFVESIKEEIKN 637 (639)
T ss_pred HHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCeEEEEECCCCceeeeeHHHHHHHHHHHhhc
Confidence 9999999998876 689999999999999999999999999999999999999999999999999999877664
|
|
| >cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-38 Score=362.75 Aligned_cols=264 Identities=25% Similarity=0.395 Sum_probs=213.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~-------- 72 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQD-------- 72 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEec--------
Confidence 479999999999999999999999999999999975432 22344568889999999999999999987732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~ 120 (330)
T cd05601 73 --------------------------------KDNLYLVMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQ 120 (330)
T ss_pred --------------------------------CCeEEEEECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999998876 679999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-----CCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-----WPKI 586 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-----~~~~ 586 (1170)
+||+||||||+|||++.++.+||+|||++..+..... .......||+.|+|||++.. ...+
T Consensus 121 ~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (330)
T cd05601 121 MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKM--------------VNSKLPVGTPDYIAPEVLTTMNGDGKGTY 186 (330)
T ss_pred CCeEcccCchHheEECCCCCEEeccCCCCeECCCCCc--------------eeeecccCCccccCHHHhccccccccCCC
Confidence 9999999999999999999999999999986532110 01123479999999999863 2457
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++|||||||++|||++ ||...........+...... ..+.....++++.+||.+||+ +|.+|||+.++++|||
T Consensus 187 ~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~ 265 (330)
T cd05601 187 GVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPF 265 (330)
T ss_pred CCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCC
Confidence 899999999999999997 88765554444433322211 112233567899999999998 9999999999999999
Q ss_pred CCCchHHHHHH
Q 001059 663 PPQMEYELLDN 673 (1170)
Q Consensus 663 ~~~~~~~~~~~ 673 (1170)
+....+..+..
T Consensus 266 ~~~~~~~~~~~ 276 (330)
T cd05601 266 FSKIDWNNIRN 276 (330)
T ss_pred cCCCCHHHHhh
Confidence 99987765543
|
Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor |
| >cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=351.12 Aligned_cols=256 Identities=27% Similarity=0.405 Sum_probs=199.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|++.+.||+|+||+||+|+++.+|+.||+|.++...........+.+|+.+++.+ +||||++++++|....
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~----- 75 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSR----- 75 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeecccc-----
Confidence 48899999999999999999999999999999976543333334566777777665 7999999998874320
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
......++++|||++++|.+++... ..+++..++.++.||+.||+|||
T Consensus 76 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH 125 (288)
T cd07863 76 ------------------------------TDRETKVTLVFEHVDQDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH 125 (288)
T ss_pred ------------------------------CCCCceEEEEEcccccCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0124568999999999999988764 34899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++...... ..+...||+.|+|||++.+ ..++.++
T Consensus 126 ~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (288)
T cd07863 126 ANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQM----------------ALTPVVVTLWYRAPEVLLQ-STYATPV 188 (288)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccCccccccCcc----------------cCCCccccccccCchHhhC-CCCCCcc
Confidence 9999999999999999999999999999998653111 1133578999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------CCC--------CccccCCHHHHHHHHHc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELP--------PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------~~p--------~~~~~~~~e~~~LI~~~ 643 (1170)
|||||||++|+|++ ||...........+....+ ... ......+..+.++|.+|
T Consensus 189 DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 268 (288)
T cd07863 189 DMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEM 268 (288)
T ss_pred hhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccccccccCCCCCCchHHhCcCcCHHHHHHHHHH
Confidence 99999999999996 5554433332222211100 000 01123456788999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 001059 644 MSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+.||.+|||+.++++||||
T Consensus 269 L~~dP~~R~t~~~~l~hp~f 288 (288)
T cd07863 269 LTFNPHKRISAFRALQHPFF 288 (288)
T ss_pred hccCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou |
| >cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=358.68 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=207.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||.||+|+++.+|..||+|++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 74 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 74 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE--------
Confidence 478999999999999999999999999999999987542 33445679999999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++ ++|.+++.....+++..+..++.|++.||.|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 122 (331)
T cd06649 75 --------------------------------DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREK 122 (331)
T ss_pred --------------------------------CCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhc
Confidence 356899999997 59999998888899999999999999999999986
Q ss_pred -CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 -gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 184 (331)
T cd06649 123 HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSD 184 (331)
T ss_pred CCEEcCCCChhhEEEcCCCcEEEccCccccccccc-----------------ccccCCCCcCcCCHhHhcC-CCCCchHh
Confidence 6999999999999999999999999998754211 1133579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhh---------------------------------------------cC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQ---------------------------------------------KG 623 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~---------------------------------------------~~ 623 (1170)
||||||++|||++ ||......+.. ..+.. ..
T Consensus 185 iwslG~il~el~tg~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (331)
T cd06649 185 IWSMGLSLVELAIGRYPIPPPDAKELE-AIFGRPVVDGEEGEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNE 263 (331)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHH-HHhcccccccccCCccccCcccccccccccccccccccchhHHHHHHHHHhC
Confidence 9999999999997 77543322211 10000 00
Q ss_pred CCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 624 ELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 624 ~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
..+. .....++++++||.+||..||++|||+.++++|+|+....
T Consensus 264 ~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 308 (331)
T cd06649 264 PPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE 308 (331)
T ss_pred CCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence 0111 1123467899999999999999999999999999987654
|
Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-38 Score=365.67 Aligned_cols=275 Identities=26% Similarity=0.425 Sum_probs=215.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|.++.+|+.||||+++.... .......+.+|+.++..++||||++++++|.
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~--------- 71 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQ--------- 71 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE---------
Confidence 479999999999999999999999999999999974321 2234567888999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+..++|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~ 120 (360)
T cd05627 72 -------------------------------DKRNLYLIMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQL 120 (360)
T ss_pred -------------------------------cCCEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999997 58999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccC-----CCCCCC------C---------CCccccCcccccCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-----AAFPTD------T---------GGVSVDGTGQVGTY 572 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~-----~~~~~~------~---------~~~~~~~~~~~GT~ 572 (1170)
||+||||||+|||++.++++||+|||++..+........ ...+.. . ........+.+||+
T Consensus 121 givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~ 200 (360)
T cd05627 121 GFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTP 200 (360)
T ss_pred CeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccccCCcccccccccccccccccccccccccccccCCCc
Confidence 999999999999999999999999999976532110000 000000 0 00000122458999
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCC
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
.|+|||++.+ ..++.++|||||||++|||++ ||...........+.... ..+|+ ....++++++||.+|+ .|
T Consensus 201 ~Y~APE~~~~-~~~~~~~DiwSlGvilyel~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~-~~~~s~~~~~li~~l~-~~ 277 (360)
T cd05627 201 DYIAPEVFMQ-TGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPP-EVPISEKAKDLILRFC-TD 277 (360)
T ss_pred cccCHHHHcC-CCCCCcceeccccceeeecccCCCCCCCCCHHHHHHHHHcCCCceecCC-CCCCCHHHHHHHHHhc-cC
Confidence 9999999987 568999999999999999997 887666555444443322 22232 2335779999999977 49
Q ss_pred CCCCC---CHHHHHhccCCCCchHHHHH
Q 001059 648 PSDRP---SATELLQDALPPQMEYELLD 672 (1170)
Q Consensus 648 P~~RP---ta~eiL~~~~~~~~~~~~~~ 672 (1170)
|.+|+ ++.++++||||....+..+.
T Consensus 278 p~~R~~~~~~~ei~~hp~f~~~~~~~~~ 305 (360)
T cd05627 278 SENRIGSNGVEEIKSHPFFEGVDWGHIR 305 (360)
T ss_pred hhhcCCCCCHHHHhcCCCCCCCCHHHHh
Confidence 99998 58999999999999877653
|
Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul |
| >cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=358.97 Aligned_cols=257 Identities=26% Similarity=0.385 Sum_probs=210.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCC-CceeEEEEEeecCccccCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~Hp-nIV~l~~~~~e~~~~~~~~ 433 (1170)
+|++++.||+|+||.||+|+++.+++.||||++..... .....+.+..|..+++.++|+ +|+++++++.+
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------- 72 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQT-------- 72 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEc--------
Confidence 58999999999999999999999999999999975321 223345678899999999775 57778777632
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 120 (324)
T cd05587 73 --------------------------------MDRLYFVMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSK 120 (324)
T ss_pred --------------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||++....... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (324)
T cd05587 121 GIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG---------------KTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (324)
T ss_pred CeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC---------------CceeeecCCccccChhhhcC-CCCCcccch
Confidence 99999999999999999999999999986421100 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~~~~~ 664 (1170)
|||||++|||++ ||......+....+......+|. ..++++.++|++||..||.+|++. .++++||||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~ 261 (324)
T cd05587 185 WAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---SLSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFR 261 (324)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcC
Confidence 999999999997 88766665555555443333333 456789999999999999999976 8999999999
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...+..+
T Consensus 262 ~~~~~~~ 268 (324)
T cd05587 262 RIDWEKL 268 (324)
T ss_pred CCCHHHH
Confidence 8876543
|
Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory |
| >cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=363.65 Aligned_cols=261 Identities=28% Similarity=0.391 Sum_probs=206.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||++++++|....
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~----- 89 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 89 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc-----
Confidence 468999999999999999999999999999999999765544455677889999999999999999998874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|++||||+++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 90 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~l~~~~~~~~~~qi~~aL~~LH~~ 138 (355)
T cd07874 90 -----------------------------SLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 138 (355)
T ss_pred -----------------------------cccccceeEEEhhhhcccHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0012346899999999988887753 488999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++||
T Consensus 139 givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 201 (355)
T cd07874 139 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 201 (355)
T ss_pred CcccCCCChHHEEECCCCCEEEeeCcccccCCCc----------------cccCCccccCCccCHHHHcC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------------C-----CCC------------ccc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------------E-----LPP------------SWV 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------------~-----~p~------------~~~ 630 (1170)
|||||++|+|++ ||............+...+ . .+. ...
T Consensus 202 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (355)
T cd07874 202 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 281 (355)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhcccccccccccccc
Confidence 999999999997 7764433222111111000 0 000 001
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
..+.++++||.+||..||.+|||+.++|+|||+...
T Consensus 282 ~~~~~~~~li~~mL~~dP~~Rps~~ell~hp~~~~~ 317 (355)
T cd07874 282 LKASQARDLLSKMLVIDPAKRISVDEALQHPYINVW 317 (355)
T ss_pred ccchHHHHHHHHHhcCCchhcCCHHHHhcCcchhcc
Confidence 123567899999999999999999999999999644
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok |
| >cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-38 Score=360.05 Aligned_cols=251 Identities=25% Similarity=0.400 Sum_probs=206.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||+++++++..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~------------- 67 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQT------------- 67 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEc-------------
Confidence 369999999999999999999999999975321 122345677888888876 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~iv~Ey~~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~ 120 (320)
T cd05590 68 ---------------------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYR 120 (320)
T ss_pred ---------------------------CCEEEEEEcCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 457899999997 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~NIli~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (320)
T cd05590 121 DLKLDNVLLDHEGHCKLADFGMCKEGIFNG---------------KTTSTFCGTPDYIAPEILQE-MLYGPSVDWWAMGV 184 (320)
T ss_pred CCCHHHeEECCCCcEEEeeCCCCeecCcCC---------------CcccccccCccccCHHHHcC-CCCCCccchhhhHH
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH------HHHHhccCCCCchH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA------TELLQDALPPQMEY 668 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta------~eiL~~~~~~~~~~ 668 (1170)
++|||++ ||......+....+.......|. ..++++.+||++||+.||.+||++ +++++|+||....+
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~~~ 261 (320)
T cd05590 185 LLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---WLSQDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKELDW 261 (320)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCCCH
Confidence 9999997 88766665555444433333332 356789999999999999999998 99999999998876
Q ss_pred HH
Q 001059 669 EL 670 (1170)
Q Consensus 669 ~~ 670 (1170)
..
T Consensus 262 ~~ 263 (320)
T cd05590 262 EK 263 (320)
T ss_pred HH
Confidence 54
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal |
| >cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-37 Score=354.97 Aligned_cols=258 Identities=25% Similarity=0.411 Sum_probs=206.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|.+.+.||+|+||+||+|+++.+++.||+|.++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 75 (309)
T cd07872 5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIVHT-------- 75 (309)
T ss_pred CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccC-CcchhHHHHHHHHHhCCCCCcceEEEEEee--------
Confidence 47899999999999999999999999999999999754322 223467789999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++++|.+.+.... .+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (309)
T cd07872 76 --------------------------------DKSLTLVFEYLDKDLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRR 123 (309)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35689999999999998886544 489999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... .......+|+.|+|||++.+...++.++||
T Consensus 124 ~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 188 (309)
T cd07872 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSVPT---------------KTYSNEVVTLWYRPPDVLLGSSEYSTQIDM 188 (309)
T ss_pred CeecCCCCHHHEEECCCCCEEECccccceecCCCc---------------cccccccccccccCCHHHhCCCCCCcHHHH
Confidence 99999999999999999999999999987532111 011234689999999998765668999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCC--------CccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELP--------PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p--------~~~~~~~~e~~~LI~~ 642 (1170)
|||||++|+|++ ||......+.........+ ..+ ......++++.+||.+
T Consensus 189 wslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (309)
T cd07872 189 WGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTK 268 (309)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHH
Confidence 999999999997 6755443322221111100 001 0112356788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.++++|+||....
T Consensus 269 ~L~~dp~~R~t~~e~l~h~~~~~~~ 293 (309)
T cd07872 269 FLQYESKKRISAEEAMKHAYFRSLG 293 (309)
T ss_pred hccCChhhCCCHHHHhcChhhhhcc
Confidence 9999999999999999999998654
|
Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play |
| >cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=366.00 Aligned_cols=263 Identities=22% Similarity=0.386 Sum_probs=212.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|.
T Consensus 42 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~-------- 113 (370)
T cd05596 42 AEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQ-------- 113 (370)
T ss_pred HHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEe--------
Confidence 5799999999999999999999999999999999974321 1223345778999999999999999998773
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
+..++|+|||||+ |+|.+++.. ..+++..+..++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~l~~-~~l~~~~~~~~~~qi~~aL~~LH~ 160 (370)
T cd05596 114 --------------------------------DDKYLYMVMEYMPGGDLVNLMSN-YDIPEKWARFYTAEVVLALDAIHS 160 (370)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 589888765 458999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CCCCc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PKIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~~~ 588 (1170)
+||+||||||+|||++.++.+||+|||++........ ......+||+.|+|||++.+. ..++.
T Consensus 161 ~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05596 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGM--------------VRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCc--------------ccCCCCCCCcCeECHHHhccCCCCCCCCC
Confidence 9999999999999999999999999999976432110 012345799999999998753 23789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhccC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 662 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~~ 662 (1170)
++|||||||++|||++ ||...........+....... .+.....++++.+||++||+.+|.+ |+|++++++|+|
T Consensus 227 ~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~ 306 (370)
T cd05596 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPF 306 (370)
T ss_pred ceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcc
Confidence 9999999999999997 887665554444444322221 1233356789999999999999988 999999999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
+.+..+...
T Consensus 307 ~~~~~~~~~ 315 (370)
T cd05596 307 FKNDQWTFD 315 (370)
T ss_pred cCCCChhhH
Confidence 998766533
|
Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in |
| >cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=364.01 Aligned_cols=260 Identities=28% Similarity=0.372 Sum_probs=206.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~----- 96 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK----- 96 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccc-----
Confidence 458999999999999999999999999999999999755444445567889999999999999999998763210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+||||++++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 97 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~~~~qi~~aL~~LH~~ 145 (364)
T cd07875 97 -----------------------------SLEEFQDVYIVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 145 (364)
T ss_pred -----------------------------cccccCeEEEEEeCCCCCHHHHHHh--cCCHHHHHHHHHHHHHHHHHHhhC
Confidence 0112356899999999998887753 488999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... ...+...||+.|+|||++.+ ..++.++||
T Consensus 146 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----------------~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di 208 (364)
T cd07875 146 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 208 (364)
T ss_pred CeecCCCCHHHEEECCCCcEEEEeCCCccccCCC----------------CcccCCcccCCcCCHHHHhC-CCCCchhhH
Confidence 9999999999999999999999999999754211 11234578999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC---------------------------------------Cccc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP---------------------------------------PSWV 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p---------------------------------------~~~~ 630 (1170)
|||||++|+|++ ||............+...+..+ ....
T Consensus 209 wSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (364)
T cd07875 209 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 288 (364)
T ss_pred HhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccc
Confidence 999999999997 7765544333222221111000 0001
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
...+++++||.+||+.||.+|||+.++|+|||+..
T Consensus 289 ~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~ 323 (364)
T cd07875 289 LKASQARDLLSKMLVIDASKRISVDEALQHPYINV 323 (364)
T ss_pred cccHHHHHHHHHhcCcCcccCCCHHHHhcCccccc
Confidence 12346789999999999999999999999999864
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn |
| >cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-38 Score=363.52 Aligned_cols=260 Identities=26% Similarity=0.408 Sum_probs=205.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|.+..+++.||||++............+.+|+.+|+.++||||++++++|....
T Consensus 14 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 87 (343)
T cd07878 14 PERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPAT------ 87 (343)
T ss_pred hhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccc------
Confidence 46899999999999999999999999999999998754433334566889999999999999999998763211
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
.......+|++|++++++|.+++. ...+++..++.++.||+.||+|||++|
T Consensus 88 ----------------------------~~~~~~~~~~~~~~~~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ 138 (343)
T cd07878 88 ----------------------------SIENFNEVYLVTNLMGADLNNIVK-CQKLSDEHVQFLIYQLLRGLKYIHSAG 138 (343)
T ss_pred ----------------------------cccccCcEEEEeecCCCCHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 001234579999999999988775 456999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||+++.... ..+..+||+.|+|||++.+...++.++|||
T Consensus 139 ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Diw 200 (343)
T cd07878 139 IIHRDLKPSNVAVNEDCELRILDFGLARQADD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 200 (343)
T ss_pred eecccCChhhEEECCCCCEEEcCCccceecCC------------------CcCCccccccccCchHhcCCccCCchhhhH
Confidence 99999999999999999999999999975421 123457999999999998755689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-----------------------CCCC-----ccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------------ELPP-----SWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-----------------------~~p~-----~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||................+ ..+. .+....+.+.+||.+
T Consensus 201 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 280 (343)
T cd07878 201 SVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEK 280 (343)
T ss_pred hHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHH
Confidence 99999999997 6654332222211111000 0110 112345678899999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||..||.+|||+.++++||||.+.
T Consensus 281 mL~~dp~~R~s~~ell~hp~~~~~ 304 (343)
T cd07878 281 MLVLDSDKRISASEALAHPYFSQY 304 (343)
T ss_pred HcCCChhhCCCHHHHhcCcchhcc
Confidence 999999999999999999999765
|
Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is |
| >cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=358.19 Aligned_cols=259 Identities=27% Similarity=0.404 Sum_probs=206.8
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
+|++.+.||+|+||+||+|++. .+|+.||+|++..... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQ----- 75 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEe-----
Confidence 5899999999999999999874 4789999999974321 222345678899999999 5999999998773
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++||||+ ++|.+++.....+++..++.++.||+.||+|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~ 120 (332)
T cd05614 76 -----------------------------------TEAKLHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEH 120 (332)
T ss_pred -----------------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2457899999997 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++...... .......+||+.|||||++.+...++.
T Consensus 121 lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~ 186 (332)
T cd05614 121 LHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE--------------KERTYSFCGTIEYMAPEIIRGKGGHGK 186 (332)
T ss_pred HHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC--------------CCccccccCCccccCHHHhcCCCCCCC
Confidence 999999999999999999999999999999997542111 001234579999999999987555889
Q ss_pred cchhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 656 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~e 656 (1170)
++|||||||++|||++ ||.... ............. +.....++.+.++|.+||+.||++|| ++++
T Consensus 187 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~ 263 (332)
T cd05614 187 AVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDP---PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASE 263 (332)
T ss_pred ccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHH
Confidence 9999999999999997 775321 1122222222222 22234567899999999999999999 8899
Q ss_pred HHhccCCCCchHHHH
Q 001059 657 LLQDALPPQMEYELL 671 (1170)
Q Consensus 657 iL~~~~~~~~~~~~~ 671 (1170)
+++|+|+....+...
T Consensus 264 ~l~h~~~~~~~~~~~ 278 (332)
T cd05614 264 IKEHPFFKGLDWEAL 278 (332)
T ss_pred HHcCCCcCCCCHHHH
Confidence 999999998765543
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-37 Score=357.19 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=211.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+|++.+.||+|+||+||+|+++.+++.||||+++.... .......+..|..++..+ +||+|+++++++..
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~-------- 72 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQT-------- 72 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEec--------
Confidence 68999999999999999999999999999999975432 122334567788888777 58889999887732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ |+|.+.+.....+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 120 (323)
T cd05616 73 --------------------------------MDRLYFVMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSK 120 (323)
T ss_pred --------------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05616 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CEEecCCCHHHeEECCCCcEEEccCCCceecCCCC---------------CccccCCCChhhcCHHHhcC-CCCCCccch
Confidence 99999999999999999999999999987432110 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~ 664 (1170)
|||||++|||++ ||...........+......+|. ..++++.+++.+||+.||.+|++ ..++++|+||.
T Consensus 185 wSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~ 261 (323)
T cd05616 185 WAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFR 261 (323)
T ss_pred hchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcC
Confidence 999999999997 88766665555555444433443 45679999999999999999997 48999999999
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...+...
T Consensus 262 ~~~~~~~ 268 (323)
T cd05616 262 YIDWEKL 268 (323)
T ss_pred CCCHHHH
Confidence 8876543
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and |
| >cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=358.12 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=207.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+|+.||||+++.... .......+..|..+++.+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~------------- 67 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQT------------- 67 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975321 223345677889988876 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHr 120 (321)
T cd05591 68 ---------------------------KDRLFFVMEYVNGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYR 120 (321)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 356899999997 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (321)
T cd05591 121 DLKLDNILLDAEGHCKLADFGMCKEGILNG---------------VTTTTFCGTPDYIAPEILQE-LEYGPSVDWWALGV 184 (321)
T ss_pred CCCHHHeEECCCCCEEEeecccceecccCC---------------ccccccccCccccCHHHHcC-CCCCCccceechhH
Confidence 999999999999999999999987432111 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-------CHHHHHhccCCCCch
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-------SATELLQDALPPQME 667 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-------ta~eiL~~~~~~~~~ 667 (1170)
++|||++ ||......+....+.......|. ..++++.++|++||+.||.+|| ++.++++||||....
T Consensus 185 il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~~ 261 (321)
T cd05591 185 LMYEMMAGQPPFEADNEDDLFESILHDDVLYPV---WLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEID 261 (321)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCCC
Confidence 9999997 88766665555554443333332 3467899999999999999999 999999999998887
Q ss_pred HHHH
Q 001059 668 YELL 671 (1170)
Q Consensus 668 ~~~~ 671 (1170)
+..+
T Consensus 262 ~~~~ 265 (321)
T cd05591 262 WVLL 265 (321)
T ss_pred HHHH
Confidence 6644
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to |
| >cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-38 Score=360.86 Aligned_cols=251 Identities=27% Similarity=0.371 Sum_probs=206.0
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+.||+|+||+||+|+++.+|+.||+|+++.... .......+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~-------------- 66 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT-------------- 66 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEc--------------
Confidence 369999999999999999999999999975432 22334567889999999999999999987732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccc
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 517 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||+ +||+||
T Consensus 67 --------------------------~~~~~lv~E~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHr 120 (325)
T cd05594 67 --------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYR 120 (325)
T ss_pred --------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEec
Confidence 457899999997 5898888888889999999999999999999998 799999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05594 121 DLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVDWWGLGV 184 (325)
T ss_pred CCCCCeEEECCCCCEEEecCCCCeecCCCC---------------cccccccCCcccCCHHHHcc-CCCCCccccccccc
Confidence 999999999999999999999987431110 01133579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCchHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQMEYE 669 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~~~ 669 (1170)
++|||++ ||...........+......+|. ..++++.+||++||+.||.+|+ ++.++++|+||.+..+.
T Consensus 185 il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~~~~ 261 (325)
T cd05594 185 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---TLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGIVWQ 261 (325)
T ss_pred eeeeeccCCCCCCCCCHHHHHHHHhcCCCCCCC---CCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999997 77665554444433333333333 4567999999999999999996 99999999999987755
Q ss_pred H
Q 001059 670 L 670 (1170)
Q Consensus 670 ~ 670 (1170)
.
T Consensus 262 ~ 262 (325)
T cd05594 262 D 262 (325)
T ss_pred H
Confidence 3
|
Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien |
| >PTZ00284 protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=374.95 Aligned_cols=253 Identities=21% Similarity=0.280 Sum_probs=198.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCC------CceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ------HVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hp------nIV~l~~~~~e~~ 427 (1170)
.++|+++++||+|+||+||+|.+..+++.||||+++... .....+..|+.+++.++|. +|++++++|..
T Consensus 128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~---~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~-- 202 (467)
T PTZ00284 128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP---KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN-- 202 (467)
T ss_pred CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch---hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc--
Confidence 368999999999999999999999999999999996422 2234566788888777654 47777766622
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...++|+||++++++|.+++...+.+++..++.++.||+.||+
T Consensus 203 -------------------------------------~~~~~~iv~~~~g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~ 245 (467)
T PTZ00284 203 -------------------------------------ETGHMCIVMPKYGPCLLDWIMKHGPFSHRHLAQIIFQTGVALD 245 (467)
T ss_pred -------------------------------------CCceEEEEEeccCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHH
Confidence 2356899999999999999988888999999999999999999
Q ss_pred HHHh-CCccccCCCCCceeecCCC----------------CEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 508 HIHG-QGIIHRDLTPNNIFFDARN----------------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 508 yLHs-~gIiHrDLKp~NILi~~~~----------------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
|||+ .|||||||||+|||++.++ .+||+|||+++.... ..+..+|
T Consensus 246 yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~------------------~~~~~~g 307 (467)
T PTZ00284 246 YFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDLGGCCDERH------------------SRTAIVS 307 (467)
T ss_pred HHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCCCccccCcc------------------ccccccC
Confidence 9998 5999999999999998765 499999998864211 1244689
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccc-----------------
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV----------------- 630 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~----------------- 630 (1170)
|+.|+|||++.+ ..|+.++|||||||++|||++ ||......+....+....+.+|..|.
T Consensus 308 t~~Y~APE~~~~-~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~ 386 (467)
T PTZ00284 308 TRHYRSPEVVLG-LGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQ 386 (467)
T ss_pred CccccCcHHhhc-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhccc
Confidence 999999999988 569999999999999999997 77655443332222111121111110
Q ss_pred ----------------------cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 631 ----------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 631 ----------------------~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...+.+.+||.+||+.||.+|||++|+|+||||.+..
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~~~~~ 445 (467)
T PTZ00284 387 LRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYVLKYY 445 (467)
T ss_pred ccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccccccC
Confidence 0124567999999999999999999999999998653
|
|
| >cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=356.63 Aligned_cols=254 Identities=25% Similarity=0.379 Sum_probs=205.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHH---HhccCCCceeEEEEEeecCccccC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATL---SRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL---~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
|++++.||+|+||.||+|.++.+|+.||||+++.... .....+.+.+|+.++ +.++||||+++++++..
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~------- 73 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQT------- 73 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEc-------
Confidence 6789999999999999999999999999999975431 122345566676655 56689999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||++ +|...+.. ..+++..++.++.||+.||+|||+
T Consensus 74 ---------------------------------~~~~~lv~E~~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~al~~lH~ 119 (324)
T cd05589 74 ---------------------------------EDHVCFVMEYAAGGDLMMHIHT-DVFSEPRAVFYAACVVLGLQYLHE 119 (324)
T ss_pred ---------------------------------CCEEEEEEcCCCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999975 78776654 579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++...... ......+||+.|||||++.+ ..++.++|
T Consensus 120 ~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (324)
T cd05589 120 NKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFG---------------DRTSTFCGTPEFLAPEVLTE-TSYTRAVD 183 (324)
T ss_pred CCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCC---------------CcccccccCccccCHhHhcC-CCCCcccc
Confidence 999999999999999999999999999987431110 11234679999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~ 663 (1170)
||||||++|||++ ||......+....+.......|. ..++++.++|++||+.||.+|| ++.++++|+||
T Consensus 184 iwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f 260 (324)
T cd05589 184 WWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR---FLSREAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFF 260 (324)
T ss_pred hhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCc
Confidence 9999999999997 88766555554444443333333 3567899999999999999999 79999999999
Q ss_pred CCchHHH
Q 001059 664 PQMEYEL 670 (1170)
Q Consensus 664 ~~~~~~~ 670 (1170)
....+..
T Consensus 261 ~~~~~~~ 267 (324)
T cd05589 261 RDINWDD 267 (324)
T ss_pred CCCCHHH
Confidence 9876543
|
Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved |
| >cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-37 Score=363.67 Aligned_cols=261 Identities=24% Similarity=0.401 Sum_probs=209.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.
T Consensus 42 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~-------- 113 (370)
T cd05621 42 AEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQ-------- 113 (370)
T ss_pred HHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEE--------
Confidence 4789999999999999999999999999999999974322 2223456789999999999999999998873
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++|+|||||+ |+|.+++... .+++..+..++.||+.||+|||+
T Consensus 114 --------------------------------~~~~~~lv~Ey~~gg~L~~~l~~~-~~~~~~~~~~~~qil~aL~~LH~ 160 (370)
T cd05621 114 --------------------------------DDKYLYMVMEYMPGGDLVNLMSNY-DVPEKWAKFYTAEVVLALDAIHS 160 (370)
T ss_pred --------------------------------cCCEEEEEEcCCCCCcHHHHHHhc-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5899888654 68999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC---CCCc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~ 588 (1170)
+||+||||||+|||++.++.+||+|||+|....... .......+||+.|||||++.+.. .++.
T Consensus 161 ~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~--------------~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~ 226 (370)
T cd05621 161 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (370)
T ss_pred CCeEecCCCHHHEEECCCCCEEEEecccceecccCC--------------ceecccCCCCcccCCHHHHhccCCCCCCCc
Confidence 999999999999999999999999999998643211 01123457999999999987532 3789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhccC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 662 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~~ 662 (1170)
++|||||||++|||++ ||...........+......+ .+.....++.++++|.+||..+|.+ |+++.++++|||
T Consensus 227 ~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~ 306 (370)
T cd05621 227 ECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPF 306 (370)
T ss_pred ccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcc
Confidence 9999999999999997 887666555544444322221 1223345778999999999866644 899999999999
Q ss_pred CCCchHH
Q 001059 663 PPQMEYE 669 (1170)
Q Consensus 663 ~~~~~~~ 669 (1170)
+....+.
T Consensus 307 ~~~~~~~ 313 (370)
T cd05621 307 FKNDQWN 313 (370)
T ss_pred cCCCCcC
Confidence 9886543
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found |
| >KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-38 Score=360.34 Aligned_cols=248 Identities=27% Similarity=0.392 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+++.+...||+|+||+||+|+|-. .||||+++....+.+..+.|.+||.+|++-+|.||+=+.|+|..+
T Consensus 392 ~ev~l~~rIGsGsFGtV~Rg~whG---dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p-------- 460 (678)
T KOG0193|consen 392 EEVLLGERIGSGSFGTVYRGRWHG---DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNP-------- 460 (678)
T ss_pred HHhhccceeccccccceeeccccc---ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCC--------
Confidence 556678899999999999999973 599999999888888889999999999999999999999998543
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.+.||+.+|.| +|+.+++.. ..|+....+.|+.||+.||.|||.+
T Consensus 461 ---------------------------------~~AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK 507 (678)
T KOG0193|consen 461 ---------------------------------PLAIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAK 507 (678)
T ss_pred ---------------------------------ceeeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhh
Confidence 34899999987 899998744 5699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~~ks 590 (1170)
+|||||||+.|||+.++++|||+|||++.........++ .....|...|||||++... ..|++.+
T Consensus 508 ~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q-------------~~qp~gsilwmAPEvIRmqd~nPfS~qS 574 (678)
T KOG0193|consen 508 NIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQ-------------LEQPHGSLLWMAPEVIRMQDDNPFSFQS 574 (678)
T ss_pred hhhhhhccccceEEccCCcEEEecccceeeeeeeccccc-------------cCCCccchhhhcHHHHhhcccCCCCccc
Confidence 999999999999999999999999999986543321111 1223578899999997642 4589999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|||++ ||......++....-++. ........+++.++++|+..||..++++||.+.+||.
T Consensus 575 DVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~ 648 (678)
T KOG0193|consen 575 DVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS 648 (678)
T ss_pred chhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence 99999999999998 888544444443332221 1112233445558999999999999999999999986
|
|
| >KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-38 Score=352.32 Aligned_cols=258 Identities=25% Similarity=0.397 Sum_probs=224.5
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+....=|.+.+.||+|.|..|.+|+|..||..||||+|.+...+.-....+.+|+..|+-++|||||++|++.
T Consensus 14 gkIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi------- 86 (864)
T KOG4717|consen 14 GKIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI------- 86 (864)
T ss_pred cceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh-------
Confidence 3445668889999999999999999999999999999987766555566899999999999999999999764
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....+|+|+|+-+ |+|++++.+. ..+.+..+.+|+.||+.|+.|
T Consensus 87 ---------------------------------DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~Y 133 (864)
T KOG4717|consen 87 ---------------------------------DTQTKLYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISY 133 (864)
T ss_pred ---------------------------------cccceEEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHH
Confidence 13578999999986 5999998765 469999999999999999999
Q ss_pred HHhCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
+|+.++|||||||+|+.+-+ -|-|||.|||++..+.+.. ..++.||+.+|-|||++.|..+-.
T Consensus 134 CHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~----------------kL~TsCGSLAYSAPEILLGDsYDA 197 (864)
T KOG4717|consen 134 CHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGK----------------KLTTSCGSLAYSAPEILLGDSYDA 197 (864)
T ss_pred HhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcc----------------hhhcccchhhccCchhhhcCccCC
Confidence 99999999999999998765 4899999999998764332 235679999999999999966566
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
+++||||||||||-|++ ||....+.+.+..++..+...|.. .+.++++||.+||..||.+|.+.++|..++|.+
T Consensus 198 PAVDiWSLGVILyMLVCGq~PFqeANDSETLTmImDCKYtvPsh---vS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq 274 (864)
T KOG4717|consen 198 PAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIMDCKYTVPSH---VSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQ 274 (864)
T ss_pred cchhhhHHHHHHHHHHhCCCccccccchhhhhhhhcccccCchh---hhHHHHHHHHHHHhcCchhhccHHHHhcccccc
Confidence 89999999999999986 999988888888888777777764 456999999999999999999999999999988
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
...
T Consensus 275 ~~D 277 (864)
T KOG4717|consen 275 AGD 277 (864)
T ss_pred CCC
Confidence 764
|
|
| >KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-38 Score=361.34 Aligned_cols=250 Identities=25% Similarity=0.407 Sum_probs=207.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|.-++.||.|+||-||-|++..+.+.||||++.... .+.+..+++++||..|++++|||+|.|.+||+.
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLr---------- 97 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLR---------- 97 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeec----------
Confidence 555788999999999999999999999999998765 345566789999999999999999999999853
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....|+|||||-|+-.+++.- ..++.+-++..|+.+.+.||+|||+.+.
T Consensus 98 ------------------------------e~TaWLVMEYClGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~ 147 (948)
T KOG0577|consen 98 ------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNR 147 (948)
T ss_pred ------------------------------cchHHHHHHHHhccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhH
Confidence 345699999999887777754 3568999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccchh
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKADM 592 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ksDI 592 (1170)
||||||..|||+++.|.|||+|||.|....+ ..+++|||+|||||++.. .+.|+-++||
T Consensus 148 IHRDiKAGNILLse~g~VKLaDFGSAsi~~P-------------------AnsFvGTPywMAPEVILAMDEGqYdgkvDv 208 (948)
T KOG0577|consen 148 IHRDIKAGNILLSEPGLVKLADFGSASIMAP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVDV 208 (948)
T ss_pred HhhhccccceEecCCCeeeeccccchhhcCc-------------------hhcccCCccccchhHheeccccccCCccce
Confidence 9999999999999999999999999986532 367899999999998753 3679999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||+..||.- |....+-+..+..+. ++....-.....+..+++|+..||++-|.+|||.+++|.|+|....
T Consensus 209 WSLGITCIELAERkPPlFnMNAMSALYHIA-QNesPtLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~ 284 (948)
T KOG0577|consen 209 WSLGITCIELAERKPPLFNMNAMSALYHIA-QNESPTLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRE 284 (948)
T ss_pred eeccchhhhhhhcCCCccCchHHHHHHHHH-hcCCCCCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccC
Confidence 999999999984 555444444444333 3332222223344588999999999999999999999999986544
|
|
| >cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-37 Score=356.03 Aligned_cols=250 Identities=29% Similarity=0.450 Sum_probs=205.0
Q ss_pred eeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 361 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+.||+|+||.||+|++. .+|+.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~---------- 71 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQT---------- 71 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEec----------
Confidence 67999999999999874 4689999999975321 22234567889999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+|++|||++ ++|.+.+...+.+.+..++.++.||+.||+|||++||
T Consensus 72 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i 121 (323)
T cd05584 72 ------------------------------GGKLYLILEYLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGI 121 (323)
T ss_pred ------------------------------CCeEEEEEeCCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 356899999997 5899999888889999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||
T Consensus 122 vH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diws 185 (323)
T cd05584 122 IYRDLKPENILLDAQGHVKLTDFGLCKESIHEG---------------TVTHTFCGTIEYMAPEILMR-SGHGKAVDWWS 185 (323)
T ss_pred ecCCCCHHHeEECCCCCEEEeeCcCCeecccCC---------------CcccccCCCccccChhhccC-CCCCCcceecc
Confidence 999999999999999999999999987431110 01133579999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQM 666 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~ 666 (1170)
|||++|||++ ||...........+......+|+ ..++++.+||++||+.||.+|| ++.++++|+|+...
T Consensus 186 lG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~ 262 (323)
T cd05584 186 LGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLPP---YLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV 262 (323)
T ss_pred cHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence 9999999997 77766555544444443333333 3567899999999999999999 89999999999887
Q ss_pred hHH
Q 001059 667 EYE 669 (1170)
Q Consensus 667 ~~~ 669 (1170)
.+.
T Consensus 263 ~~~ 265 (323)
T cd05584 263 NWD 265 (323)
T ss_pred CHH
Confidence 654
|
Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in |
| >cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-37 Score=354.77 Aligned_cols=252 Identities=27% Similarity=0.417 Sum_probs=203.2
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|++..+++.||||+++.... .......+..|..++..+ +||||+++++++.
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~-------------- 66 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQ-------------- 66 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEE--------------
Confidence 369999999999999999999999999975321 112334556677777654 8999999998773
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 67 --------------------------~~~~~~lv~e~~~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~ 120 (316)
T cd05592 67 --------------------------TKEHLFFVMEYLNGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYR 120 (316)
T ss_pred --------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeC
Confidence 2457899999996 5999999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05592 121 DLKLDNVLLDKDGHIKIADFGMCKENMNGE---------------GKASTFCGTPDYIAPEILKG-QKYNESVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEEccCcCCeECCCCC---------------CccccccCCccccCHHHHcC-CCCCCcccchhHHH
Confidence 999999999999999999999997532111 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-HHHHhccCCCCchHHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELL 671 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-~eiL~~~~~~~~~~~~~ 671 (1170)
++|||++ ||......+....+......+| ...++++.+||.+||+.||.+||++ .++++|+|+....+..+
T Consensus 185 il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~ 259 (316)
T cd05592 185 LLYEMLIGQSPFHGEDEDELFDSILNDRPHFP---RWISKEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGIDWERL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCcccCCCCHHHH
Confidence 9999996 8876665554444333222222 3456789999999999999999986 58889999998876544
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp |
| >cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=354.92 Aligned_cols=264 Identities=24% Similarity=0.417 Sum_probs=211.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||+||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------- 72 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQD-------- 72 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEec--------
Confidence 479999999999999999999999999999999974321 22234568889999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..++|+||||++ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (331)
T cd05597 73 --------------------------------ENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQ 120 (331)
T ss_pred --------------------------------CCeEEEEEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 457899999996 599999876 4579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 587 (1170)
+||+||||||+|||++.++.+||+|||++..+..... ......+||+.|||||++.+ ...++
T Consensus 121 ~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05597 121 LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGT--------------VQSNVAVGTPDYISPEILQAMEDGKGRYG 186 (331)
T ss_pred CCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCC--------------ccccceeccccccCHHHHhhccccccCCC
Confidence 9999999999999999999999999999875432110 01123469999999999863 24578
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....+.... ..+++.....+++++++|++||+.++.+ ||++.++++|
T Consensus 187 ~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccCCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 89999999999999997 887655544444443322 2344555557789999999998765544 8899999999
Q ss_pred cCCCCchHHHHH
Q 001059 661 ALPPQMEYELLD 672 (1170)
Q Consensus 661 ~~~~~~~~~~~~ 672 (1170)
+||....+....
T Consensus 267 p~~~~~~~~~~~ 278 (331)
T cd05597 267 PFFEGIDWDNIR 278 (331)
T ss_pred CCCCCCCHHHHh
Confidence 999988766543
|
Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, |
| >cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=355.99 Aligned_cols=252 Identities=23% Similarity=0.369 Sum_probs=202.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||||+++..... ......+.+|..+++.+ +||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~------------- 67 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEc-------------
Confidence 4699999999999999999999999999754322 23345678899999998 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|..++...+.+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05588 68 ---------------------------ESRLFFVIEFVSGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5899888888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05588 121 DLKLDNVLLDAEGHIKLTDYGMCKEGIRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHeEECCCCCEEECcCccccccccCC---------------CccccccCCccccCHHHHcC-CCCCCccceechHH
Confidence 999999999999999999999987421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCch--------hHHHHHHHHhh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCCC------HHHHHh
Q 001059 598 VFFELWH---PFSTA--------MERQIVLSDLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 659 (1170)
Q Consensus 598 iL~ELlt---Pf~~~--------~~~~~~~~~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------a~eiL~ 659 (1170)
++|+|++ ||... .........+. ....+| ...++++.++|++||+.||.+||+ +.++++
T Consensus 185 ~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 185 LMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred HHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 9999997 77421 11111222222 222233 245678999999999999999987 799999
Q ss_pred ccCCCCchHHHH
Q 001059 660 DALPPQMEYELL 671 (1170)
Q Consensus 660 ~~~~~~~~~~~~ 671 (1170)
||||....+...
T Consensus 262 hp~~~~~~~~~~ 273 (329)
T cd05588 262 HPFFRNIDWDLL 273 (329)
T ss_pred CCCCCCCCHHHH
Confidence 999988876644
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl |
| >cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-37 Score=357.06 Aligned_cols=251 Identities=22% Similarity=0.323 Sum_probs=196.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
++|++.+.||+|+||.||+|.+. .++..||||+++.. ........+.+|+.+|+.+ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (338)
T cd05102 7 DRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEG-ATASEHKALMSELKILIHIGNHLNVVNLLGACTKP-- 83 (338)
T ss_pred hHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccc-cchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC--
Confidence 57999999999999999999863 34578999998743 2233456789999999999 899999999987331
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 487 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 487 (1170)
...+|++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 126 (338)
T cd05102 84 -------------------------------------NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRA 126 (338)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhh
Confidence 235799999997 5998888642
Q ss_pred ------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcee
Q 001059 488 ------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525 (1170)
Q Consensus 488 ------------------------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NIL 525 (1170)
..+++..+..++.||+.||+|||++||+||||||+|||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil 206 (338)
T cd05102 127 MVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNIL 206 (338)
T ss_pred hhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEE
Confidence 23778888999999999999999999999999999999
Q ss_pred ecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-
Q 001059 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 604 (1170)
Q Consensus 526 i~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt- 604 (1170)
++.++.+||+|||+++.+..... ........+++.|+|||++.+ ..++.++|||||||++|||++
T Consensus 207 ~~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sDiwslG~il~el~~~ 272 (338)
T cd05102 207 LSENNVVKICDFGLARDIYKDPD-------------YVRKGSARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSL 272 (338)
T ss_pred EcCCCcEEEeecccccccccCcc-------------hhcccCCCCCccccCcHHhhc-CCCCcccCHHHHHHHHHHHHhC
Confidence 99999999999999986421110 011123356789999999987 568999999999999999984
Q ss_pred ---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 605 ---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 605 ---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||......+.....+. .+..+......++++.++|.+||+.||.+|||+.++++.
T Consensus 273 g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~el~~~ 330 (338)
T cd05102 273 GASPYPGVQINEEFCQRLK-DGTRMRAPENATPEIYRIMLACWQGDPKERPTFSALVEI 330 (338)
T ss_pred CCCCCCCCCccHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 7765433333323222 222333334567789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V |
| >cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-37 Score=354.40 Aligned_cols=252 Identities=27% Similarity=0.374 Sum_probs=203.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||.||+|+++.+|+.||+|+++.... .......+..|..++..+ +||||++++++|.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~------------- 67 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQT------------- 67 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEe-------------
Confidence 469999999999999999999999999975321 112344567788888754 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
..++|+|||||+ ++|...+.....+++..+..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHr 120 (316)
T cd05620 68 ---------------------------KEHLFFVMEFLNGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYR 120 (316)
T ss_pred ---------------------------CCEEEEEECCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5899998888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (316)
T cd05620 121 DLKLDNVMLDRDGHIKIADFGMCKENVFGD---------------NRASTFCGTPDYIAPEILQG-LKYTFSVDWWSFGV 184 (316)
T ss_pred CCCHHHeEECCCCCEEeCccCCCeecccCC---------------CceeccCCCcCccCHHHHcC-CCCCcccchhhhHH
Confidence 999999999999999999999986421100 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-HHHHhccCCCCchHHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-TELLQDALPPQMEYELL 671 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-~eiL~~~~~~~~~~~~~ 671 (1170)
++|||++ ||......+....+......+| ...++++++||++||+.||.+||++ +++++|+||....+...
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~~~~~~ 259 (316)
T cd05620 185 LLYEMLIGQSPFHGDDEDELFESIRVDTPHYP---RWITKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTINWTAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCCCHHHH
Confidence 9999996 8876655444433332222222 2356799999999999999999998 58889999999876544
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I |
| >KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-40 Score=345.65 Aligned_cols=250 Identities=26% Similarity=0.471 Sum_probs=210.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+-|.++.+||+|+||.||+|.|+.+|+.+|||.++.. .+.+++.+|+.++.+++.|++|+|||.|+.
T Consensus 33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~----sDLQEIIKEISIMQQC~S~yVVKYYGSYFK--------- 99 (502)
T KOG0574|consen 33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD----TDLQEIIKEISIMQQCKSKYVVKYYGSYFK--------- 99 (502)
T ss_pred HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc----chHHHHHHHHHHHHHcCCchhhhhhhhhcc---------
Confidence 4578899999999999999999999999999998743 346789999999999999999999998754
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|||||||+ |+..++++. +.++++.++..++...+.||+|||..
T Consensus 100 -------------------------------~sDLWIVMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~ 148 (502)
T KOG0574|consen 100 -------------------------------HSDLWIVMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDL 148 (502)
T ss_pred -------------------------------CCceEeehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHH
Confidence 356899999997 799998874 56799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
.-||||||..|||++.+|++||+|||.|-.+...- ....+.+|||.|||||+++. -.|+.++||
T Consensus 149 ~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVI~E-IGY~~~ADI 212 (502)
T KOG0574|consen 149 KKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVIEE-IGYDTKADI 212 (502)
T ss_pred HHHHhhcccccEEEcccchhhhhhccccchhhhhH---------------HhhCccccCcccccHHHHHH-hccchhhhH
Confidence 99999999999999999999999999998764321 22456799999999999987 458999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc---ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~---~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++..||.- ||..-.++.....+-. ..||.+ ...+.++.+|+++||.+.|++|-|+.++++|+|.++-
T Consensus 213 WSLGITaIEMAEG~PPYsDIHPMRAIFMIPT---~PPPTF~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA 289 (502)
T KOG0574|consen 213 WSLGITAIEMAEGRPPYSDIHPMRAIFMIPT---KPPPTFKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNA 289 (502)
T ss_pred hhhcchhhhhhcCCCCcccccccceeEeccC---CCCCCCCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCC
Confidence 999999999985 7766655544333222 222222 2234578999999999999999999999999998876
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 290 ~ 290 (502)
T KOG0574|consen 290 P 290 (502)
T ss_pred C
Confidence 5
|
|
| >cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-37 Score=357.64 Aligned_cols=251 Identities=27% Similarity=0.425 Sum_probs=207.1
Q ss_pred eeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.||+|+||.||++++. .+|+.||+|+++...........+.+|+.+|++++||||++++++|..
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------------ 69 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQT------------ 69 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEc------------
Confidence 57999999999999873 578999999997543333334567889999999999999999988732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||++||+|
T Consensus 70 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 121 (318)
T cd05582 70 ----------------------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIY 121 (318)
T ss_pred ----------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEec
Confidence 357899999996 699999988888999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||||
T Consensus 122 ~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslG 185 (318)
T cd05582 122 RDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSFCGTVEYMAPEVVNR-RGHTQSADWWSFG 185 (318)
T ss_pred CCCCHHHeEECCCCcEEEeeccCCcccCCCC---------------CceecccCChhhcCHHHHcC-CCCCCccceeccc
Confidence 9999999999999999999999987542110 01234579999999999987 5689999999999
Q ss_pred HHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCCCchH
Q 001059 597 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 668 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~~~~~ 668 (1170)
|++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||+ +.++++|+||....+
T Consensus 186 ~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~~~ 262 (318)
T cd05582 186 VLMFEMLTGSLPFQGKDRKETMTMILKAKLGMPQ---FLSPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTIDW 262 (318)
T ss_pred eEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCCCH
Confidence 99999997 78766555555444443333443 35678999999999999999999 788999999998865
Q ss_pred HH
Q 001059 669 EL 670 (1170)
Q Consensus 669 ~~ 670 (1170)
..
T Consensus 263 ~~ 264 (318)
T cd05582 263 NK 264 (318)
T ss_pred HH
Confidence 53
|
Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate |
| >cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=344.16 Aligned_cols=253 Identities=29% Similarity=0.478 Sum_probs=203.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|+++.+|+.||||+++...........+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQ---------- 70 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEee----------
Confidence 5899999999999999999999999999999987654443345678899999999999999999998743
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 ------------------------------~~~~~~v~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~ 120 (285)
T cd07861 71 ------------------------------ESRLYLIFEFLSMDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSR 120 (285)
T ss_pred ------------------------------CCeEEEEEecCCCCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3578999999999998887643 4589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 121 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 185 (285)
T cd07861 121 RVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV---------------RVYTHEVVTLWYRAPEVLLGSPRYSTPVDI 185 (285)
T ss_pred CeeecCCCHHHEEEcCCCcEEECcccceeecCCCc---------------ccccCCcccccccChHHhcCCCCcCcHHHH
Confidence 99999999999999999999999999997542111 011334678999999998775567899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC--------------------------CCCCccccCCHHHHHHHHHc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~--------------------------~~p~~~~~~~~e~~~LI~~~ 643 (1170)
|||||++|+|++ ||................+ .........++++.++|++|
T Consensus 186 ~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (285)
T cd07861 186 WSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKM 265 (285)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHH
Confidence 999999999997 6654433222211111000 00111234567889999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 001059 644 MSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+.||.+|||+.+++.|+||
T Consensus 266 l~~dP~~Rpt~~~ll~~~~~ 285 (285)
T cd07861 266 LIYDPAKRISAKKALNHPYF 285 (285)
T ss_pred hcCChhhCCCHHHHhcCCCC
Confidence 99999999999999999996
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 |
| >KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=358.18 Aligned_cols=237 Identities=27% Similarity=0.404 Sum_probs=197.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
....++-||.|+-|.||+|+.+ ++.||||+++- .-..+++-|++|+||||+.+.|+|.
T Consensus 125 ~IsELeWlGSGaQGAVF~Grl~--netVAVKKV~e---------lkETdIKHLRkLkH~NII~FkGVCt----------- 182 (904)
T KOG4721|consen 125 EISELEWLGSGAQGAVFLGRLH--NETVAVKKVRE---------LKETDIKHLRKLKHPNIITFKGVCT----------- 182 (904)
T ss_pred HhhhhhhhccCcccceeeeecc--CceehhHHHhh---------hhhhhHHHHHhccCcceeeEeeeec-----------
Confidence 3344667999999999999987 89999997641 1123688899999999999999983
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
..+.++||||||. |-|..+|.....++......+..+|+.||.|||.+.|
T Consensus 183 -----------------------------qsPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKI 233 (904)
T KOG4721|consen 183 -----------------------------QSPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKI 233 (904)
T ss_pred -----------------------------CCceeEEeeeccccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhH
Confidence 3578999999997 7999999999999999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
||||||+-||||+.+..|||+|||-++...... +..+++||..|||||++.. ...+.|+||||
T Consensus 234 IHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~S----------------TkMSFaGTVaWMAPEvIrn-ePcsEKVDIwS 296 (904)
T KOG4721|consen 234 IHRDLKSPNILISYDDVVKISDFGTSKELSDKS----------------TKMSFAGTVAWMAPEVIRN-EPCSEKVDIWS 296 (904)
T ss_pred hhhccCCCceEeeccceEEeccccchHhhhhhh----------------hhhhhhhhHhhhCHHHhhc-CCcccccceeh
Confidence 999999999999999999999999998764321 2356899999999999998 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
|||+|||||| ||..-....+....-. +....+.+..++..++-||++||+..|..||++.+||+|-
T Consensus 297 fGVVLWEmLT~EiPYkdVdssAIIwGVGs-NsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl 365 (904)
T KOG4721|consen 297 FGVVLWEMLTGEIPYKDVDSSAIIWGVGS-NSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL 365 (904)
T ss_pred hHHHHHHHHhcCCCccccchheeEEeccC-CcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence 9999999998 8776554433221111 1112233455667899999999999999999999999983
|
|
| >cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-37 Score=353.70 Aligned_cols=251 Identities=27% Similarity=0.400 Sum_probs=206.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||||+++.... .......+.+|..+++.+ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~------------- 67 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQT------------- 67 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEc-------------
Confidence 469999999999999999999999999975421 222345677899999888 79999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..+..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~ 120 (318)
T cd05570 68 ---------------------------KDRLFFVMEYVNGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYR 120 (318)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEcc
Confidence 457899999996 5899988888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DiwslGv 184 (318)
T cd05570 121 DLKLDNVLLDSEGHIKIADFGMCKEGILGG---------------VTTSTFCGTPDYIAPEILSY-QPYGPAVDWWALGV 184 (318)
T ss_pred CCCHHHeEECCCCcEEecccCCCeecCcCC---------------CcccceecCccccCHHHhcC-CCCCcchhhhhHHH
Confidence 999999999999999999999986421110 01133579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhccCCCCchHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALPPQMEYE 669 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~~~~~~~~~~ 669 (1170)
++|+|++ ||...........+.......| ...++++.+||++||..||.+||++ .++++|+|+....+.
T Consensus 185 il~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~~~~ 261 (318)
T cd05570 185 LLYEMLAGQSPFEGDDEDELFQSILEDEVRYP---RWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREIDWD 261 (318)
T ss_pred HHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCCCHH
Confidence 9999997 8876555554444433333333 2456789999999999999999999 999999999988765
Q ss_pred H
Q 001059 670 L 670 (1170)
Q Consensus 670 ~ 670 (1170)
.
T Consensus 262 ~ 262 (318)
T cd05570 262 K 262 (318)
T ss_pred H
Confidence 3
|
Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re |
| >cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=354.70 Aligned_cols=252 Identities=23% Similarity=0.372 Sum_probs=202.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++.++ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~------------- 67 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT------------- 67 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEe-------------
Confidence 469999999999999999999999999975432 223445678899988877 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~E~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~ 120 (329)
T cd05618 68 ---------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYR 120 (329)
T ss_pred ---------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeC
Confidence 457899999997 5898888888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dikp~Nili~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (329)
T cd05618 121 DLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFSVDWWALGV 184 (329)
T ss_pred CCCHHHEEECCCCCEEEeeCCccccccCCC---------------CccccccCCccccCHHHHcC-CCCCCccceecccH
Confidence 999999999999999999999987431110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCch--------hHHHHHHH-HhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC------HHHHHh
Q 001059 598 VFFELWH---PFSTA--------MERQIVLS-DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQ 659 (1170)
Q Consensus 598 iL~ELlt---Pf~~~--------~~~~~~~~-~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------a~eiL~ 659 (1170)
++|||++ ||... ........ .......+| ...++.+.++|++||+.||.+||+ +.++++
T Consensus 185 il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p---~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05618 185 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIP---RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 261 (329)
T ss_pred HHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhc
Confidence 9999997 77411 11111222 222222233 345678999999999999999998 589999
Q ss_pred ccCCCCchHHHH
Q 001059 660 DALPPQMEYELL 671 (1170)
Q Consensus 660 ~~~~~~~~~~~~ 671 (1170)
||||....+...
T Consensus 262 hp~f~~~~~~~~ 273 (329)
T cd05618 262 HPFFRNVDWDLM 273 (329)
T ss_pred CCCCCCCCHHHH
Confidence 999999877654
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o |
| >cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-37 Score=346.95 Aligned_cols=253 Identities=30% Similarity=0.497 Sum_probs=201.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||.||+|+++.+|+.||+|.++...........+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~----------- 69 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLH----------- 69 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhc-----------
Confidence 488999999999999999999999999999999765444334456788999999999999999987762
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
+...+|+++|||+++|.+.+.. ...+++..++.++.||+.||.|||++||
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i 120 (284)
T cd07839 70 -----------------------------SDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNV 120 (284)
T ss_pred -----------------------------cCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCE
Confidence 2456899999999999888765 4569999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diws 185 (284)
T cd07839 121 LHRDLKPQNLLINKNGELKLADFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWS 185 (284)
T ss_pred ecCCCCHHHEEEcCCCcEEECccchhhccCCCC---------------CCcCCCccccCCcChHHHhCCcccCcHHHHHH
Confidence 999999999999999999999999997543211 01123467899999999887555799999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHh-hhc-----------------CCCC---------CccccCCHHHHHHHHHcc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDL-KQK-----------------GELP---------PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l-~~~-----------------~~~p---------~~~~~~~~e~~~LI~~~L 644 (1170)
|||++|+|++ ||......+.....+ ... ...+ ......++++.+||++||
T Consensus 186 lG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07839 186 AGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLL 265 (284)
T ss_pred HHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHh
Confidence 9999999996 544322221111111 000 0000 111235678899999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 001059 645 SPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~ 663 (1170)
+.||.+|||++++++|+||
T Consensus 266 ~~~P~~R~t~~~il~h~~f 284 (284)
T cd07839 266 VCNPVQRISAEEALQHPYF 284 (284)
T ss_pred cCChhhcCCHHHHhcCCCC
Confidence 9999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also |
| >cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=352.58 Aligned_cols=258 Identities=26% Similarity=0.398 Sum_probs=210.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+|+..+.||+|+||+||+|+++.+|+.||+|+++.... .......+..|..+++.+. ||+|+++++++.
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~--------- 71 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQ--------- 71 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEe---------
Confidence 47889999999999999999999999999999975321 2223456778999998886 567778887763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|+|||||+ ++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~ 120 (323)
T cd05615 72 -------------------------------TVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRR 120 (323)
T ss_pred -------------------------------cCCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999996 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||
T Consensus 121 ~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 184 (323)
T cd05615 121 GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG---------------VTTRTFCGTPDYIAPEIIAY-QPYGKSVDW 184 (323)
T ss_pred CeeccCCCHHHeEECCCCCEEEeccccccccCCCC---------------ccccCccCCccccCHHHHcC-CCCCCccch
Confidence 99999999999999999999999999987432110 01234579999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~ 664 (1170)
|||||++|||++ ||...........+.......|. ..++++.+++.+||+.||.+|++ ..++++|+||.
T Consensus 185 wslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~ 261 (323)
T cd05615 185 WAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK---SLSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFR 261 (323)
T ss_pred hhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccC
Confidence 999999999997 88776665555555443433443 35678999999999999999997 58999999999
Q ss_pred CchHHHHH
Q 001059 665 QMEYELLD 672 (1170)
Q Consensus 665 ~~~~~~~~ 672 (1170)
...+....
T Consensus 262 ~~~~~~~~ 269 (323)
T cd05615 262 RIDWDKLE 269 (323)
T ss_pred CCCHHHHh
Confidence 98766443
|
Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a |
| >cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=346.65 Aligned_cols=258 Identities=25% Similarity=0.406 Sum_probs=206.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++.+.||.|+||.||+|+++.+++.||+|.++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~-------- 75 (301)
T cd07873 5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-------- 75 (301)
T ss_pred ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEeccccc-CchhHHHHHHHHHHhcCCCCcceEEEEEec--------
Confidence 57899999999999999999999999999999998754322 223467789999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++++|.+.+... ..+++..++.++.||+.||+|||++
T Consensus 76 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~ 123 (301)
T cd07873 76 --------------------------------EKSLTLVFEYLDKDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRR 123 (301)
T ss_pred --------------------------------CCeEEEEEeccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999999999888754 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 124 ~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 188 (301)
T cd07873 124 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---------------KTYSNEVVTLWYRPPDILLGSTDYSTQIDM 188 (301)
T ss_pred CeeCCCCCHHHEEECCCCcEEECcCcchhccCCCC---------------CcccccceeecccCcHHHhCCCCCccHHHH
Confidence 99999999999999999999999999997542111 011234678999999998775568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCCC--------ccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP--------SWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~--------~~~~~~~e~~~LI~~ 642 (1170)
|||||++|||++ ||......+.........+ ..|. .....++.+++||.+
T Consensus 189 ~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 268 (301)
T cd07873 189 WGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSK 268 (301)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhccccccccccCccccccHHhhcCCCCHHHHHHHHH
Confidence 999999999997 6654443322211111000 0110 112356788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||++++++|+||....
T Consensus 269 ml~~dp~~R~t~~eil~h~~f~~~~ 293 (301)
T cd07873 269 LLQFEGRKRISAEEAMKHPYFHCLG 293 (301)
T ss_pred HhcCCcccCcCHHHHhcCccccccc
Confidence 9999999999999999999998765
|
Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl |
| >cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=355.04 Aligned_cols=250 Identities=26% Similarity=0.401 Sum_probs=202.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHH-HHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+|+.||||++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~------------- 67 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEe-------------
Confidence 469999999999999999999999999975422 1122344555554 5678999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~ 120 (323)
T cd05575 68 ---------------------------ADKLYFVLDYVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYR 120 (323)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeC
Confidence 457899999996 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (323)
T cd05575 121 DLKPENILLDSQGHVVLTDFGLCKEGIEHS---------------KTTSTFCGTPEYLAPEVLRK-QPYDRTVDWWCLGA 184 (323)
T ss_pred CCCHHHeEECCCCcEEEeccCCCcccccCC---------------CccccccCChhhcChhhhcC-CCCCccccccccch
Confidence 999999999999999999999987431110 11234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYE 669 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~~ 669 (1170)
++|||++ ||......+....+......+++ ..++.+.++|++||+.||.+||++ .++++|+||....+.
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~~~~ 260 (323)
T cd05575 185 VLYEMLYGLPPFYSRDTAEMYDNILNKPLRLKP---NISVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSINWD 260 (323)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCCCHH
Confidence 9999997 88765555544444433333333 456789999999999999999987 699999999887654
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr |
| >cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=353.93 Aligned_cols=264 Identities=23% Similarity=0.386 Sum_probs=213.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.++||+|+||+||+++++.+++.||+|++..... .......+.+|+.++..++||||+++++++.
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQ--------- 71 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEe---------
Confidence 479999999999999999999999999999999864321 1223345788999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
+...+|+|||||+ |+|.+++.+ ...+++..++.++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~ 120 (332)
T cd05623 72 -------------------------------DENNLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQ 120 (332)
T ss_pred -------------------------------cCCEEEEEEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 699999976 4579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 587 (1170)
+||+||||||+|||++.++.+||+|||++..+.... .......+||+.|+|||++.+ ...++
T Consensus 121 ~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (332)
T cd05623 121 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--------------TVQSSVAVGTPDYISPEILQAMEDGKGKYG 186 (332)
T ss_pred CCeEecCCCHHHEEECCCCCEEEeecchheecccCC--------------cceecccccCccccCHHHHhccccCCCCCC
Confidence 999999999999999999999999999987542111 011223579999999999863 24588
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....+.... ..+|......++++++||++||+.+|.+ |+++.++++|
T Consensus 187 ~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccCCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 99999999999999997 887666555554444332 2345555567889999999999765554 7899999999
Q ss_pred cCCCCchHHHHH
Q 001059 661 ALPPQMEYELLD 672 (1170)
Q Consensus 661 ~~~~~~~~~~~~ 672 (1170)
+||.+..+..+.
T Consensus 267 ~~f~~~~~~~~~ 278 (332)
T cd05623 267 PFFTGIDWDNIR 278 (332)
T ss_pred CCcCCCCHHHHh
Confidence 999998776543
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw |
| >PTZ00283 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=370.83 Aligned_cols=267 Identities=27% Similarity=0.421 Sum_probs=215.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.+.+.||+|+||+||+|++..+|+.||||++.....+......+.+|+.+|..++|+||++++..+.....
T Consensus 31 ~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~----- 105 (496)
T PTZ00283 31 AKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP----- 105 (496)
T ss_pred CCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc-----
Confidence 468999999999999999999999999999999998766665666778899999999999999999877633210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL~y 508 (1170)
........+++||||++ |+|.+++... ..+++..++.++.||+.||+|
T Consensus 106 ---------------------------~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~ 158 (496)
T PTZ00283 106 ---------------------------RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHH 158 (496)
T ss_pred ---------------------------cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 00112345789999997 6999888642 468999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.
T Consensus 159 lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~-------------~~~~~~~~Gt~~Y~aPE~~~~-~~~s~ 224 (496)
T PTZ00283 159 VHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVS-------------DDVGRTFCGTPYYVAPEIWRR-KPYSK 224 (496)
T ss_pred HHhCCEecCCCCHHHEEEeCCCCEEEEecccCeecccccc-------------ccccccccCCcceeCHHHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 001234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|||++ ||......+.....+. +..++.....++++.++|.+||+.||.+||++.++++|||+..
T Consensus 225 k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~ 302 (496)
T PTZ00283 225 KADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLA--GRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKL 302 (496)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999997 8876655544444332 2333334456789999999999999999999999999998766
Q ss_pred chH
Q 001059 666 MEY 668 (1170)
Q Consensus 666 ~~~ 668 (1170)
...
T Consensus 303 ~~~ 305 (496)
T PTZ00283 303 FIS 305 (496)
T ss_pred hhh
Confidence 543
|
|
| >cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=352.69 Aligned_cols=252 Identities=27% Similarity=0.400 Sum_probs=203.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|++..+++.||||+++.... .......+..|..+++.+ +||||+++++++.+
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~------------- 67 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQT------------- 67 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEe-------------
Confidence 469999999999999999999999999975421 112334567788888764 99999999988733
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+||||++ ++|.+++.....+++.++..++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHr 120 (316)
T cd05619 68 ---------------------------KENLFFVMEYLNGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYR 120 (316)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeC
Confidence 356899999996 5999999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (316)
T cd05619 121 DLKLDNILLDTDGHIKIADFGMCKENMLGD---------------AKTCTFCGTPDYIAPEILLG-QKYNTSVDWWSFGV 184 (316)
T ss_pred CCCHHHEEECCCCCEEEccCCcceECCCCC---------------CceeeecCCccccCHHHHcC-CCCCchhhhhhHHH
Confidence 999999999999999999999987421110 01134579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH-HHHhccCCCCchHHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPPQMEYELL 671 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~-eiL~~~~~~~~~~~~~ 671 (1170)
++|||++ ||......+...........+| ...+.+++++|.+||+.||.+||++. ++++||||....+..+
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~~~~~ 259 (316)
T cd05619 185 LLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP---RWLTREAKDILVKLFVREPERRLGVKGDIRQHPFFREIDWSAL 259 (316)
T ss_pred HHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC---ccCCHHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCCHHHH
Confidence 9999997 8866555444333322222222 23567899999999999999999996 8999999999876543
|
Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in |
| >cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-37 Score=350.68 Aligned_cols=250 Identities=26% Similarity=0.427 Sum_probs=189.6
Q ss_pred EeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 360 LQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
.++||+|+||+||+|+++ .+++.||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~----------- 70 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH----------- 70 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC----cHHHHHHHHHHHhcCCCCCcceeeeEecC-----------
Confidence 368999999999999976 3678999999864332 34578899999999999999999887432
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHH
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++|||++++|.+++... ..+++..++.++.||+.||+|
T Consensus 71 ---------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~ 123 (317)
T cd07868 71 ---------------------------ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHY 123 (317)
T ss_pred ---------------------------CCcEEEEEEeccCCCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 23568999999999998887532 248999999999999999999
Q ss_pred HHhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 509 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||++||+||||||+|||+ +.++.+||+|||+|+....... ........+||+.|+|||++.+..
T Consensus 124 LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~~~ 191 (317)
T cd07868 124 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK------------PLADLDPVVVTFWYRAPELLLGAR 191 (317)
T ss_pred HHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCCc------------cccccCCccccccccCCHHHcCCC
Confidence 999999999999999999 4557899999999986532110 001123457899999999998756
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHH---------HHHHHHhhhcCC-----------CC---------------
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLKQKGE-----------LP--------------- 626 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~---------~~~~~~l~~~~~-----------~p--------------- 626 (1170)
.++.++||||+||++|||++ ||...... .....+....+. .+
T Consensus 192 ~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (317)
T cd07868 192 HYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYT 271 (317)
T ss_pred CcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccC
Confidence 68999999999999999997 66422110 000000000000 00
Q ss_pred ---------CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 627 ---------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 627 ---------~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.......+++.+||++||+.||.+|||++++|+||||
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07868 272 NCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYF 317 (317)
T ss_pred cccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 0001123467899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p |
| >cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-37 Score=359.55 Aligned_cols=262 Identities=24% Similarity=0.382 Sum_probs=210.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|+++.+++.||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 42 ~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~------- 114 (371)
T cd05622 42 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD------- 114 (371)
T ss_pred hhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc-------
Confidence 4799999999999999999999999999999999875322 22234567889999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..++|+|||||+ ++|.+++.. ..+++..+..++.||+.||+|||+
T Consensus 115 ---------------------------------~~~~~lv~Ey~~gg~L~~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~ 160 (371)
T cd05622 115 ---------------------------------DRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS 160 (371)
T ss_pred ---------------------------------CCEEEEEEcCCCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 588888765 458999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC---CCCc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP---KIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~---~~~~ 588 (1170)
+||+||||||+|||++.++++||+|||+++.+.... .......+||+.|||||++.+.. .++.
T Consensus 161 ~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~ 226 (371)
T cd05622 161 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 226 (371)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCC--------------cccccCcccCccccCHHHHhccCCCccCCC
Confidence 999999999999999999999999999998653211 01123457999999999987532 3789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhccC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDAL 662 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~~ 662 (1170)
++|||||||++|||++ ||...........+....... .+.....++.++++|.+||..++.+ |++++++++|+|
T Consensus 227 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~ 306 (371)
T cd05622 227 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLF 306 (371)
T ss_pred ccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcc
Confidence 9999999999999996 887665555544444332222 2233457789999999999854443 789999999999
Q ss_pred CCCchHHH
Q 001059 663 PPQMEYEL 670 (1170)
Q Consensus 663 ~~~~~~~~ 670 (1170)
+.+..+.+
T Consensus 307 ~~~~~~~~ 314 (371)
T cd05622 307 FKNDQWAW 314 (371)
T ss_pred cCCCChhH
Confidence 98876544
|
Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an |
| >KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-38 Score=336.35 Aligned_cols=297 Identities=24% Similarity=0.377 Sum_probs=236.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.-+++|+.+++||+|.||+|-+|+.+.+|+.||||++++.- ........-+.|-.+|...+||.+..+...|
T Consensus 165 vTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsF------- 237 (516)
T KOG0690|consen 165 VTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSF------- 237 (516)
T ss_pred eccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhh-------
Confidence 35799999999999999999999999999999999997543 2233345567799999999999998876444
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
+....+|+||||+. |.|.-+|.+...|++..++.|-.+|+.||.||
T Consensus 238 ---------------------------------Qt~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YL 284 (516)
T KOG0690|consen 238 ---------------------------------QTQDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYL 284 (516)
T ss_pred ---------------------------------ccCceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhh
Confidence 34678999999996 58999999888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+++||+||||.+|.|+|.||++||+|||+++.-. . .-...+++||||.|+|||++.. ..|+.+
T Consensus 285 Hs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I----~-----------~g~t~kTFCGTPEYLAPEVleD-nDYgra 348 (516)
T KOG0690|consen 285 HSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI----K-----------YGDTTKTFCGTPEYLAPEVLED-NDYGRA 348 (516)
T ss_pred hhCCeeeeechhhhheeccCCceEeeecccchhcc----c-----------ccceeccccCChhhcCchhhcc-ccccce
Confidence 99999999999999999999999999999998421 1 1123567899999999999998 689999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhcc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 661 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~ 661 (1170)
+|+|.+||++|||++ ||.........--++.....+|. ..+++++.|+..+|.+||.+|. .+.+|.+|+
T Consensus 349 VDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr---~ls~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~ 425 (516)
T KOG0690|consen 349 VDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR---TLSPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHR 425 (516)
T ss_pred eehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc---cCCHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhh
Confidence 999999999999997 99877665555555555555554 4567999999999999999997 589999999
Q ss_pred CCCCchHHHHHHHHHhcCCCCCccchhhhhcccccchhhhhhhcccccccCCC
Q 001059 662 LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKHHAGTLRLNRD 714 (1170)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ln~~ 714 (1170)
||....|+.. +...+.+|-....-+..-.+.||++ .++..+.+.+.
T Consensus 426 FF~~v~W~~~--~~Kki~PPfKPqVtSetDTryFD~E-----FT~q~v~lTPP 471 (516)
T KOG0690|consen 426 FFASVDWEAT--YRKKIEPPFKPQVTSETDTRYFDEE-----FTSQPVTLTPP 471 (516)
T ss_pred hhccCCHHHH--HHhccCCCCCCCcccccchhhhhhh-----hhcceeEecCC
Confidence 9999987643 4444444433333333333334443 33444555443
|
|
| >KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-38 Score=333.82 Aligned_cols=338 Identities=19% Similarity=0.248 Sum_probs=287.1
Q ss_pred chhhccCCCC---CCCCccccccccccccccCCCcCccchhhHHHHHHHHHHhccccCCcc--chhHHHHHHHhhcCCcc
Q 001059 226 SLLQDHGSNN---DGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLT--DALPQIATELYNLGIFS 300 (1170)
Q Consensus 226 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~lc~~~g~~~--~~~~~~~~~l~~l~~~~ 300 (1170)
++++...+.| .-|.+|+-- +- --|+| +|++||+..++++.+||++|.+| +|.+.+.+.+.+++...
T Consensus 85 kll~~kadvnavnehgntplhy-ac----fwgyd----qiaedli~~ga~v~icnk~g~tpldkakp~l~~~l~e~aek~ 155 (448)
T KOG0195|consen 85 KLLSRKADVNAVNEHGNTPLHY-AC----FWGYD----QIAEDLISCGAAVNICNKKGMTPLDKAKPMLKNTLLEIAEKH 155 (448)
T ss_pred HHHHHhcccchhhccCCCchhh-hh----hhcHH----HHHHHHHhccceeeecccCCCCchhhhchHHHHHHHHHHHHh
Confidence 4555555544 566677211 11 12444 56999999999999999999999 88999999999999999
Q ss_pred ccc-cCcCCCCcchhhhhhhHHHhhhhcccccccccCCCCCCCCCCCCCCCccccCCceEEeeeccCCcEEEEEEEEccC
Q 001059 301 ERG-RDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLD 379 (1170)
Q Consensus 301 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~t 379 (1170)
++. ++++++++.|.+ .++++++.+++..++....++.++.+|.....|+.|+|+|+
T Consensus 156 gq~~nripfkdt~wkg---------------------tktr~rdatlsr~~gid~~~lnl~tkl~e~hsgelwrgrwq-- 212 (448)
T KOG0195|consen 156 GQSPNRIPFKDTTWKG---------------------TKTRTRDATLSRYTGIDVSSLNLITKLAESHSGELWRGRWQ-- 212 (448)
T ss_pred CCCCCccccccccccc---------------------ccccccccccccccCcchhhhhhhhhhccCCCccccccccc--
Confidence 888 789999988876 56778888999999999999999999999999999999998
Q ss_pred CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCccccccccccccccccccc
Q 001059 380 GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 459 (1170)
Q Consensus 380 g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 459 (1170)
|..+++|+++...++.+..++|..|+..|+.+.||||+.++++|.
T Consensus 213 gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacn----------------------------------- 257 (448)
T KOG0195|consen 213 GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACN----------------------------------- 257 (448)
T ss_pred CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhcc-----------------------------------
Confidence 888999999999999888999999999999999999999999983
Q ss_pred ccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhCC--ccccCCCCCceeecCCCCEEE
Q 001059 460 QENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDARNDIKI 534 (1170)
Q Consensus 460 ~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLHs~g--IiHrDLKp~NILi~~~~~vKL 534 (1170)
..+++.++.+|++ |+|+.+++.... ++..++.+++.+|++||+|||+.. |....|++..++||++.+++|
T Consensus 258 -----sppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltari 332 (448)
T KOG0195|consen 258 -----SPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARI 332 (448)
T ss_pred -----CCCCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhhe
Confidence 3478899999998 799999997765 788999999999999999999975 667789999999999998887
Q ss_pred e--ecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC--CCccchhHHHHHHHHHhhc---CCC
Q 001059 535 G--DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFS 607 (1170)
Q Consensus 535 ~--DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~--~~~ksDIwSlGviL~ELlt---Pf~ 607 (1170)
+ |- +++++..+....|.||+||.++..+. .-.++|||||+|++|||.| ||.
T Consensus 333 smad~----------------------kfsfqe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfa 390 (448)
T KOG0195|consen 333 SMADT----------------------KFSFQEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFA 390 (448)
T ss_pred ecccc----------------------eeeeeccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccc
Confidence 5 32 23344456788999999999998554 4578999999999999998 999
Q ss_pred chhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 608 TAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 608 ~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
...+++..+++.. .+..+..++..++.+.+||.-|++.||.+||.+++|+
T Consensus 391 dlspmecgmkial-eglrv~ippgis~hm~klm~icmnedpgkrpkfdmiv 440 (448)
T KOG0195|consen 391 DLSPMECGMKIAL-EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIV 440 (448)
T ss_pred cCCchhhhhhhhh-ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence 9999999988876 4555555567788999999999999999999998875
|
|
| >cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-36 Score=352.33 Aligned_cols=255 Identities=25% Similarity=0.388 Sum_probs=205.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.++||.|+||.||+|.++.+|..+|+|++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 74 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 74 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHHCCCCcccceeEEEEE--------
Confidence 368999999999999999999999999999999987542 33445678999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ ++|.+++.....+++..+..++.||+.||.|||++
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 122 (333)
T cd06650 75 --------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 122 (333)
T ss_pred --------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 356899999996 59999998888899999999999999999999985
Q ss_pred -CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 -gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|+||||||+|||++.++.+||+|||++..+... ......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 184 (333)
T cd06650 123 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYSVQSD 184 (333)
T ss_pred CCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh-----------------ccccCCCCccccCHHHhcC-CCCCcHHH
Confidence 7999999999999999999999999999754211 0123478999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHH------------------------------------------hhhcCCCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSD------------------------------------------LKQKGELP 626 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~------------------------------------------l~~~~~~p 626 (1170)
||||||++|+|++ ||............ .......+
T Consensus 185 vwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (333)
T cd06650 185 IWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPP 264 (333)
T ss_pred HHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCCccchhhhhcccccccccHHHHHHHHhcCCCc
Confidence 9999999999996 66543322211000 00000001
Q ss_pred Cc-cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 627 PS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 627 ~~-~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.. ....++++++||.+||+.||++|||+.++++|+|+....
T Consensus 265 ~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~ 306 (333)
T cd06650 265 KLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE 306 (333)
T ss_pred cCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence 10 112356889999999999999999999999999987664
|
Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst |
| >cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-37 Score=344.04 Aligned_cols=249 Identities=28% Similarity=0.416 Sum_probs=198.1
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||+|+||+||+|.++.+|+.||+|++...... ....+.+..|+.+++.++||||++++++|.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~----------------- 63 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQ----------------- 63 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEc-----------------
Confidence 79999999999999999999999998754322 122356788999999999999999988762
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
....+|++||||+ ++|.+.+.. ...+++..++.++.||+.||+|||++||+|
T Consensus 64 -----------------------~~~~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H 120 (280)
T cd05608 64 -----------------------TKTDLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIY 120 (280)
T ss_pred -----------------------CCCeEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence 2356899999997 588777642 346899999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+||+++.++.+||+|||++..+.... .......||+.|+|||++.+ ..++.++||||||
T Consensus 121 ~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~-~~~~~~~DvwslG 184 (280)
T cd05608 121 RDLKPENVLLDNDGNVRISDLGLAVELKDGQ---------------SKTKGYAGTPGFMAPELLQG-EEYDFSVDYFALG 184 (280)
T ss_pred CCCCHHHEEECCCCCEEEeeCccceecCCCC---------------ccccccCCCcCccCHHHhcC-CCCCccccHHHHH
Confidence 9999999999999999999999997543211 01133579999999999987 5689999999999
Q ss_pred HHHHHhhc---CCCchhHH----HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCC
Q 001059 597 IVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 664 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~----~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~ 664 (1170)
|++|||++ ||...... ......... ........++++.+++.+||+.||.+|| +++++++||||.
T Consensus 185 ~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~ 261 (280)
T cd05608 185 VTLYEMIAARGPFRARGEKVENKELKQRILND---SVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFR 261 (280)
T ss_pred HHHHHHHhCCCCCCCCCcchhHHHHHHhhccc---CCCCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhh
Confidence 99999997 77643221 111111111 1112234667899999999999999999 889999999999
Q ss_pred CchHHH
Q 001059 665 QMEYEL 670 (1170)
Q Consensus 665 ~~~~~~ 670 (1170)
...+..
T Consensus 262 ~~~~~~ 267 (280)
T cd05608 262 DLNWRQ 267 (280)
T ss_pred cCCHhH
Confidence 876553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g |
| >cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=352.46 Aligned_cols=264 Identities=24% Similarity=0.402 Sum_probs=213.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||+||+++++.+++.||+|++.... ........+.+|..+++.++||||+++++++.
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~--------- 71 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQ--------- 71 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEE---------
Confidence 57999999999999999999999999999999987432 12223445788999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~lv~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~ 120 (331)
T cd05624 72 -------------------------------DENYLYLVMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQ 120 (331)
T ss_pred -------------------------------cCCEEEEEEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 599999976 4679999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----CCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~~ 587 (1170)
+||+||||||+|||++.++.+||+|||+++...... .......+||+.|+|||++.+. ..++
T Consensus 121 ~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 186 (331)
T cd05624 121 LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG--------------TVQSSVAVGTPDYISPEILQAMEDGMGKYG 186 (331)
T ss_pred CCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC--------------ceeeccccCCcccCCHHHHhccccCCCCCC
Confidence 999999999999999999999999999997643211 0111235799999999998752 3478
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....+.... ..+|......+++++++|.+||+.++.+ |++++++++|
T Consensus 187 ~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 187 PECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccCCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 89999999999999997 887665555444443322 2345555567789999999999976654 5799999999
Q ss_pred cCCCCchHHHHH
Q 001059 661 ALPPQMEYELLD 672 (1170)
Q Consensus 661 ~~~~~~~~~~~~ 672 (1170)
+||....+....
T Consensus 267 ~~f~~~~~~~~~ 278 (331)
T cd05624 267 AFFEGIDWENIR 278 (331)
T ss_pred CCcCCCCHHHHh
Confidence 999998876654
|
Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. |
| >PLN00034 mitogen-activated protein kinase kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=355.17 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=199.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|+.+++||+|+||+||+|++..+|+.||||++.... .......+.+|+.+++.++||||++++++|.+
T Consensus 72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 143 (353)
T PLN00034 72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH-EDTVRRQICREIEILRDVNHPNVVKCHDMFDH------- 143 (353)
T ss_pred CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC-cHHHHHHHHHHHHHHHhCCCCCcceeeeEecc-------
Confidence 4578999999999999999999999999999999986432 33445678999999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++||||.+ +|... ...++..+..++.||+.||+|||+
T Consensus 144 ---------------------------------~~~~~lv~e~~~~~~L~~~----~~~~~~~~~~i~~qi~~aL~~LH~ 186 (353)
T PLN00034 144 ---------------------------------NGEIQVLLEFMDGGSLEGT----HIADEQFLADVARQILSGIAYLHR 186 (353)
T ss_pred ---------------------------------CCeEEEEEecCCCCccccc----ccCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 66432 346778888999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----CCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~~ 587 (1170)
+||+||||||+|||++.++.+||+|||+++.+.... ......+||+.|+|||++... ...+
T Consensus 187 ~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 251 (353)
T PLN00034 187 RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM---------------DPCNSSVGTIAYMSPERINTDLNHGAYDG 251 (353)
T ss_pred CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc---------------ccccccccCccccCccccccccccCcCCC
Confidence 999999999999999999999999999998653111 011345799999999987531 2345
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHH--HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMER--QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~--~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
.++|||||||++|||++ ||...... ........ ....+......++++.+||.+||+.||.+|||+.++++|+|
T Consensus 252 ~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~ 330 (353)
T PLN00034 252 YAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAIC-MSQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQHPF 330 (353)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHh-ccCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 68999999999999996 77532211 11111111 12223333456779999999999999999999999999999
Q ss_pred CCCc
Q 001059 663 PPQM 666 (1170)
Q Consensus 663 ~~~~ 666 (1170)
+...
T Consensus 331 ~~~~ 334 (353)
T PLN00034 331 ILRA 334 (353)
T ss_pred cccC
Confidence 8875
|
|
| >cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=343.00 Aligned_cols=257 Identities=27% Similarity=0.399 Sum_probs=205.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|++.+.||+|+||+||++.+..+++.||||++....... .....+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------- 70 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE---------- 70 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeec----------
Confidence 4889999999999999999999999999999997543221 22345788999999999999999998762
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....+|++||||+ ++|.+++... ..+++..+..++.||+.||.|||+
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05605 71 ------------------------------TKDALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHR 120 (285)
T ss_pred ------------------------------CCCeEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2357899999996 5888877543 359999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+||++++++.++|+|||++....... .....+||+.|+|||++.+ ..++.++|
T Consensus 121 ~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05605 121 ERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE----------------TIRGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC----------------ccccccCCCCccCcHHhcC-CCCCcccc
Confidence 999999999999999999999999999987542111 1123479999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHH---HHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQI---VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~---~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~ 660 (1170)
|||+||++|||++ ||........ ....+. ...+......++.+.+||.+||..||.+|| +++++++|
T Consensus 184 iws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 184 WWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVK--EDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred chhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhh--hcccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 9999999999996 7765433221 111111 111222234567899999999999999999 99999999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
+|+....+.-.
T Consensus 262 ~~~~~~~~~~~ 272 (285)
T cd05605 262 PFFRTANFKRL 272 (285)
T ss_pred cCccCCCHHHH
Confidence 99998766544
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, |
| >PHA03209 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=357.65 Aligned_cols=247 Identities=26% Similarity=0.337 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++++.||+|+||.||+|++..+++.||+|+.... ...+|+.+++.++||||++++++|.+
T Consensus 66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~--------~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 128 (357)
T PHA03209 66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG--------TTLIEAMLLQNVNHPSVIRMKDTLVS--------- 128 (357)
T ss_pred cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc--------ccHHHHHHHHhCCCCCCcChhheEEe---------
Confidence 4799999999999999999999999999999975321 23569999999999999999988743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|+||||+.++|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 129 -------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ 177 (357)
T PHA03209 129 -------------------------------GAITCMVLPHYSSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQR 177 (357)
T ss_pred -------------------------------CCeeEEEEEccCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 346799999999999988865 456999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||+++..... .......||+.|+|||++.+ ..++.++|||
T Consensus 178 ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Diw 240 (357)
T PHA03209 178 IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA----------------PAFLGLAGTVETNAPEVLAR-DKYNSKADIW 240 (357)
T ss_pred eecCCCCHHHEEECCCCCEEEecCccccccccC----------------cccccccccccccCCeecCC-CCCCchhhHH
Confidence 999999999999999999999999999743211 01234579999999999987 5689999999
Q ss_pred HHHHHHHHhhc----CCCchh---------HHHHHHHHhhhcCCCCCc-------------------------------c
Q 001059 594 SLGIVFFELWH----PFSTAM---------ERQIVLSDLKQKGELPPS-------------------------------W 629 (1170)
Q Consensus 594 SlGviL~ELlt----Pf~~~~---------~~~~~~~~l~~~~~~p~~-------------------------------~ 629 (1170)
||||++|||++ +|.... ........+...+..|.. .
T Consensus 241 SlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (357)
T PHA03209 241 SAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQR 320 (357)
T ss_pred HHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCCccHHHHHHHhhcccCCCcccccHHHhc
Confidence 99999999985 222110 011111111111111110 0
Q ss_pred ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 630 ~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
...+.++.+||.+||+.||.+|||+.++|+||||.++
T Consensus 321 ~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~~ 357 (357)
T PHA03209 321 VNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQL 357 (357)
T ss_pred cCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhccC
Confidence 1234466789999999999999999999999999864
|
|
| >cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-37 Score=355.28 Aligned_cols=252 Identities=26% Similarity=0.397 Sum_probs=202.7
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
||+|+||+||+|+++.+|+.||||++..... .......+.+|..++..+ .||||++++++|.+
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~------------- 67 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQT------------- 67 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEec-------------
Confidence 7999999999999999999999999965322 112233456677777665 69999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|..++.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHr 120 (330)
T cd05586 68 ---------------------------DSDLYLVTDYMSGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYR 120 (330)
T ss_pred ---------------------------CCeEEEEEcCCCCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999996 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGv 185 (330)
T cd05586 121 DLKPENILLDATGHIALCDFGLSKANLTDN---------------KTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGV 185 (330)
T ss_pred cCCHHHeEECCCCCEEEecCCcCcCCCCCC---------------CCccCccCCccccCHHHHcCCCCCCCccceecccc
Confidence 999999999999999999999987532110 01234579999999999976556899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC----CHHHHHhccCCCCchHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP----ta~eiL~~~~~~~~~~~~ 670 (1170)
++|+|++ ||......+....+......+|.. ..++++.+||++||+.||.+|| ++.++++|+|+....+..
T Consensus 186 il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~~~~~ 263 (330)
T cd05586 186 LVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPKN--VLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADIDWDL 263 (330)
T ss_pred EEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCCc--cCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCCCHHH
Confidence 9999997 777655554444443333333332 3567899999999999999998 799999999999877654
Q ss_pred H
Q 001059 671 L 671 (1170)
Q Consensus 671 ~ 671 (1170)
.
T Consensus 264 ~ 264 (330)
T cd05586 264 L 264 (330)
T ss_pred H
Confidence 4
|
Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of |
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-36 Score=379.24 Aligned_cols=261 Identities=31% Similarity=0.546 Sum_probs=212.0
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
....+++|++++.||.|+||+||+|.++.++..||+|++............+.+|+.+|+.++|||||+++++|...
T Consensus 8 ge~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de--- 84 (1021)
T PTZ00266 8 GESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNK--- 84 (1021)
T ss_pred CccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEec---
Confidence 34557899999999999999999999999999999999987655555667899999999999999999999988542
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~ 504 (1170)
....+|||||||+ ++|.+++... ..+++..++.|+.||+.
T Consensus 85 -----------------------------------~~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ 129 (1021)
T PTZ00266 85 -----------------------------------ANQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLH 129 (1021)
T ss_pred -----------------------------------CCCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHH
Confidence 2356899999997 5999888652 56999999999999999
Q ss_pred HHHHHHhC-------CccccCCCCCceeecC-----------------CCCEEEeecCcchhccccccccCCCCCCCCCC
Q 001059 505 GLAHIHGQ-------GIIHRDLTPNNIFFDA-----------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560 (1170)
Q Consensus 505 gL~yLHs~-------gIiHrDLKp~NILi~~-----------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~ 560 (1170)
||+|||+. +||||||||+||||+. .+.+||+|||++..+....
T Consensus 130 ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s------------- 196 (1021)
T PTZ00266 130 ALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIES------------- 196 (1021)
T ss_pred HHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCCCceEEccCCccccccccc-------------
Confidence 99999984 4999999999999964 2359999999997642111
Q ss_pred ccccCcccccCccCCCcccccCC-CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHH
Q 001059 561 VSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ 636 (1170)
Q Consensus 561 ~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~ 636 (1170)
.....+||+.|+|||++.+. ..++.++||||||||||||++ ||............+.....+| ....++++
T Consensus 197 ---~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~~lk~~p~lp--i~~~S~eL 271 (1021)
T PTZ00266 197 ---MAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDLP--IKGKSKEL 271 (1021)
T ss_pred ---cccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHHHHhcCCCCC--cCCCCHHH
Confidence 11335799999999998642 358899999999999999997 8865554444444444333222 23456799
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 637 ESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.+||.+||+.+|.+||++.++|+|+|+...
T Consensus 272 ~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i 301 (1021)
T PTZ00266 272 NILIKNLLNLSAKERPSALQCLGYQIIKNV 301 (1021)
T ss_pred HHHHHHHhcCChhHCcCHHHHhccHHHhhc
Confidence 999999999999999999999999887654
|
|
| >cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-37 Score=352.22 Aligned_cols=252 Identities=27% Similarity=0.382 Sum_probs=202.9
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHH-HHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+|+.||+|++..... .......+.+|.. +++.++||||++++++|..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~------------- 67 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQT------------- 67 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEec-------------
Confidence 369999999999999999999999999975422 2223345556655 4677899999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~ 120 (325)
T cd05604 68 ---------------------------TEKLYFVLDFVNGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYR 120 (325)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeec
Confidence 457899999997 5898888888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DvwslG~ 184 (325)
T cd05604 121 DLKPENILLDSQGHVVLTDFGLCKEGIAQS---------------DTTTTFCGTPEYLAPEVIRK-QPYDNTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEeecCCcccCCCCC---------------CCcccccCChhhCCHHHHcC-CCCCCcCccccccc
Confidence 999999999999999999999987421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYEL 670 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~~~ 670 (1170)
++|||++ ||......+............++ ..+..+.++|++||..||.+||++ .+++.|+||....+..
T Consensus 185 il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~~~~~ 261 (325)
T cd05604 185 VLYEMLYGLPPFYCRDVAEMYDNILHKPLVLRP---GASLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESLSWTD 261 (325)
T ss_pred eehhhhcCCCCCCCCCHHHHHHHHHcCCccCCC---CCCHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCCCHHH
Confidence 9999997 78766555544444433322332 456789999999999999999976 5999999999877654
Q ss_pred H
Q 001059 671 L 671 (1170)
Q Consensus 671 ~ 671 (1170)
.
T Consensus 262 ~ 262 (325)
T cd05604 262 L 262 (325)
T ss_pred H
Confidence 3
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, |
| >cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-36 Score=350.13 Aligned_cols=253 Identities=22% Similarity=0.363 Sum_probs=203.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||+|+++.... .......+.+|+.++.++ +||||+++++++..
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 67 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQT------------- 67 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEe-------------
Confidence 469999999999999999999999999975432 223345688899999888 69999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHr 120 (327)
T cd05617 68 ---------------------------TSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYR 120 (327)
T ss_pred ---------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecc
Confidence 457899999996 5899888887889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslGv 184 (327)
T cd05617 121 DLKLDNVLLDADGHIKLTDYGMCKEGLGPG---------------DTTSTFCGTPNYIAPEILRG-EEYGFSVDWWALGV 184 (327)
T ss_pred CCCHHHEEEeCCCCEEEeccccceeccCCC---------------CceecccCCcccCCHHHHCC-CCCCchheeehhHH
Confidence 999999999999999999999987421110 01134579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCch------hHHHHHHHHhhh-cCCCCCccccCCHHHHHHHHHccCCCCCCCCC------HHHHHhcc
Q 001059 598 VFFELWH---PFSTA------MERQIVLSDLKQ-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ATELLQDA 661 (1170)
Q Consensus 598 iL~ELlt---Pf~~~------~~~~~~~~~l~~-~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------a~eiL~~~ 661 (1170)
++|||++ ||... ...+.....+.. ...+| ...++.+.++|++||+.||.+|++ +.++++|+
T Consensus 185 il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p---~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~ 261 (327)
T cd05617 185 LMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIP---RFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHT 261 (327)
T ss_pred HHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCC---CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCC
Confidence 9999997 77421 112222222222 22233 235678999999999999999997 57999999
Q ss_pred CCCCchHHHHH
Q 001059 662 LPPQMEYELLD 672 (1170)
Q Consensus 662 ~~~~~~~~~~~ 672 (1170)
||....++.+.
T Consensus 262 ~f~~~~~~~~~ 272 (327)
T cd05617 262 FFRSIDWDLLE 272 (327)
T ss_pred CCCCCCHHHHH
Confidence 99999877553
|
Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways |
| >cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-36 Score=332.81 Aligned_cols=255 Identities=28% Similarity=0.472 Sum_probs=207.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||.|++|.||+|.+..+|+.||+|.+...... ......+.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 75 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRD------ 75 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEcc------
Confidence 4688999999999999999999999999999998754322 1234568899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.....+++..++.++.|++.||+|||
T Consensus 76 ----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH 121 (263)
T cd06625 76 ----------------------------------DETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLH 121 (263)
T ss_pred ----------------------------------CCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 347899999997 589999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.||+||||||+||+++.++.++|+|||+++........ ........|++.|+|||++.+ ..++.++
T Consensus 122 ~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 188 (263)
T cd06625 122 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSS------------GTGMKSVTGTPYWMSPEVISG-EGYGRKA 188 (263)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccc------------cccccCCCcCccccCcceecc-CCCCchh
Confidence 999999999999999999999999999999754321100 000123468899999999988 5589999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||||++|||++ ||.............. ....+......++.+.++|++||..+|.+|||+.++++|+||
T Consensus 189 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 263 (263)
T cd06625 189 DVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRHFFV 263 (263)
T ss_pred hhHHHHHHHHHHHhCCCCccccchHHHHHHHhc-cCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence 99999999999997 7765444433333322 222233334566789999999999999999999999999996
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t |
| >PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-37 Score=338.76 Aligned_cols=252 Identities=35% Similarity=0.561 Sum_probs=203.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++++.||+|+||+||+|++..+++.||+|++..............+|+.+++.++||||+++++.+..
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------- 69 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQD----------- 69 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEE-----------
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccc-----------
Confidence 789999999999999999999999999999998765544444455679999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
...++++||||++ +|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~ 120 (260)
T PF00069_consen 70 -----------------------------DNYLYIVMEYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIV 120 (260)
T ss_dssp -----------------------------SSEEEEEEEEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEE
T ss_pred -----------------------------ccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4678899999987 9999999888899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|||++.++.++|+|||.+...... ........+|+.|+|||++.....++.++|||||
T Consensus 121 H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~---------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~sl 185 (260)
T PF00069_consen 121 HRDIKPENILLDENGEVKLIDFGSSVKLSEN---------------NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSL 185 (260)
T ss_dssp ESSBSGGGEEESTTSEEEESSGTTTEESTST---------------TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccc---------------cccccccccccccccccccccccccccccccccc
Confidence 9999999999999999999999999753100 0112345789999999999833678999999999
Q ss_pred HHHHHHhhc---CCCch---hHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 596 GIVFFELWH---PFSTA---MERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~---~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+++|+|++ ||... ................ ........+++.++|++||+.||++||++.++++||||
T Consensus 186 G~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~ 260 (260)
T PF00069_consen 186 GIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF 260 (260)
T ss_dssp HHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred ccccccccccccccccccchhhhhhhhhcccccccccccccchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence 999999997 77655 2222222221111000 01111123689999999999999999999999999996
|
Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A .... |
| >cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-36 Score=350.39 Aligned_cols=251 Identities=25% Similarity=0.366 Sum_probs=201.0
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHH-HHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREV-ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev-~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+++.||+|++...... ......+.+|. .+++.++||||+++++++.+
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~------------- 67 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT------------- 67 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEc-------------
Confidence 3699999999999999999999999999753221 12223444444 45678899999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHr 120 (325)
T cd05602 68 ---------------------------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYR 120 (325)
T ss_pred ---------------------------CCeEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5899999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~Nili~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (325)
T cd05602 121 DLKPENILLDSQGHIVLTDFGLCKENIEHN---------------GTTSTFCGTPEYLAPEVLHK-QPYDRTVDWWCLGA 184 (325)
T ss_pred CCCHHHeEECCCCCEEEccCCCCcccccCC---------------CCcccccCCccccCHHHHcC-CCCCCccccccccH
Confidence 999999999999999999999997432110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH----HHHhccCCCCchHHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT----ELLQDALPPQMEYEL 670 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~----eiL~~~~~~~~~~~~ 670 (1170)
++|||++ ||......+....+.......+ ...++.+.++|++||+.||.+||++. ++++|+|+....+.-
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~~~~~ 261 (325)
T cd05602 185 VLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK---PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPINWDD 261 (325)
T ss_pred HHHHHhcCCCCCCCCCHHHHHHHHHhCCcCCC---CCCCHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCCCHHH
Confidence 9999997 7876555554444433222222 34567899999999999999999865 899999998876543
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt |
| >cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-36 Score=349.18 Aligned_cols=250 Identities=27% Similarity=0.388 Sum_probs=200.6
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHH-HHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~-iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|+++.+|+.||+|++..... .......+.+|.. +++.++||||++++++|.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~------------- 67 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQT------------- 67 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEc-------------
Confidence 369999999999999999999999999975322 1122344555554 6788999999999987732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|+|||||+ ++|...+.....+++..++.++.||+.||+|||++||+||
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~ 120 (321)
T cd05603 68 ---------------------------AEKLYFVLDYVNGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYR 120 (321)
T ss_pred ---------------------------CCEEEEEEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEec
Confidence 457899999997 5898888887889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|||||||
T Consensus 121 Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~ 184 (321)
T cd05603 121 DLKPENILLDSQGHVVLTDFGLCKEGVEPE---------------ETTSTFCGTPEYLAPEVLRK-EPYDRTVDWWCLGA 184 (321)
T ss_pred cCCHHHeEECCCCCEEEccCCCCccCCCCC---------------CccccccCCcccCCHHHhcC-CCCCCcCcccccch
Confidence 999999999999999999999987421110 01234579999999999987 56899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCchHH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQMEYE 669 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~~~ 669 (1170)
++|||++ ||......+....+......+| ...+.++.++|.+||+.||.+||++ .++++|+|+....+.
T Consensus 185 il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~~~~ 260 (321)
T cd05603 185 VLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP---GGKTVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPINWD 260 (321)
T ss_pred hhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCCCHH
Confidence 9999997 7776655444444433332333 2456789999999999999999875 599999999887654
|
Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. |
| >cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-36 Score=329.86 Aligned_cols=251 Identities=28% Similarity=0.519 Sum_probs=206.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|++|.||++.++.+++.||+|.+..........+.+.+|+.++++++||||+++++.|..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEG---------- 70 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecC----------
Confidence 5899999999999999999999999999999997655554556678899999999999999999876521
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|++||||+ ++|.+++... ..+++.+++.++.|++.||+|||++
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~ 121 (257)
T cd08223 71 -----------------------------EDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEK 121 (257)
T ss_pred -----------------------------CCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2346899999997 5898888753 4589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.++||
T Consensus 122 ~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 185 (257)
T cd08223 122 HILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC---------------DMASTLIGTPYYMSPELFSN-KPYNYKSDV 185 (257)
T ss_pred CeeccCCCchhEEEecCCcEEEecccceEEecccC---------------CccccccCCcCccChhHhcC-CCCCchhhh
Confidence 99999999999999999999999999997653211 01133468999999999887 568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||++|+|++ ||............. .+..++.....++++.++|.+||+.||.+|||+.++++|||+
T Consensus 186 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 257 (257)
T cd08223 186 WALGCCVYEMATLKHAFNAKDMNSLVYRII--EGKLPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQPYI 257 (257)
T ss_pred HHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--hcCCCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence 999999999997 665444333332222 233333344567899999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. |
| >cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=329.21 Aligned_cols=250 Identities=31% Similarity=0.582 Sum_probs=209.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||.||+|.++.+|+.|++|.+............+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLD---------- 70 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeecc----------
Confidence 5889999999999999999999999999999998765555566789999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~ 120 (256)
T cd08529 71 ------------------------------KGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSK 120 (256)
T ss_pred ------------------------------CCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 357899999996 5999988764 5689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||+++.+.... .......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd08529 121 KILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT---------------NFANTIVGTPYYLSPELCED-KPYNEKSDV 184 (256)
T ss_pred CcccCCCCcceEEEeCCCCEEEcccccceeccCcc---------------chhhccccCccccCHHHhcC-CCCCCccch
Confidence 99999999999999999999999999988653211 01123468899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||++|+|++ ||.............. ...++.....++++.++|.+||+.+|++||++.++++|+|.
T Consensus 185 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 256 (256)
T cd08529 185 WALGVVLYECCTGKHPFDANNQGALILKIIR--GVFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRNPSL 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence 999999999996 7766655444433332 33333333566789999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc |
| >cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=339.02 Aligned_cols=271 Identities=23% Similarity=0.381 Sum_probs=207.4
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
-...+++|++.+.||.|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||+++++.+......
T Consensus 7 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 86 (310)
T cd07865 7 FCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATP 86 (310)
T ss_pred ccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEeccccc
Confidence 34456889999999999999999999999999999999875543333344567899999999999999999987543100
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
........|++|||++++|.+.+.... .+++.+++.++.||+.||+|
T Consensus 87 --------------------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~ 134 (310)
T cd07865 87 --------------------------------YNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYY 134 (310)
T ss_pred --------------------------------ccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 011245789999999999988887553 68999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++|+||||+||+++.++.+||+|||++.......... ........++..|+|||.+.+...++.
T Consensus 135 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 203 (310)
T cd07865 135 IHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSK-----------PNRYTNRVVTLWYRPPELLLGERDYGP 203 (310)
T ss_pred HHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccC-----------CCCccCcccCccccCcHHhcCCcccCc
Confidence 999999999999999999999999999999998653221100 011234568899999999877555789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCc-----------------------------cccCCHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS-----------------------------WVAKFSEQ 636 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-----------------------------~~~~~~e~ 636 (1170)
++||||||+++|||++ ||................+..++. ....++.+
T Consensus 204 ~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 283 (310)
T cd07865 204 PIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHA 283 (310)
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHH
Confidence 9999999999999997 555443322221111111111110 00123567
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 637 ESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.+||.+||+.||.+|||++++++|+||
T Consensus 284 ~dli~~~l~~~P~~R~t~~e~l~h~~f 310 (310)
T cd07865 284 LDLIDKLLVLDPAKRIDADTALNHDFF 310 (310)
T ss_pred HHHHHHHhcCChhhccCHHHHhcCCCC
Confidence 899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl |
| >cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-36 Score=341.62 Aligned_cols=263 Identities=27% Similarity=0.423 Sum_probs=209.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+..++|++.+.||.|+||.||+|.++.+|+.||+|+++...........+.+|+.++++++||||+++++++...
T Consensus 4 ~~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 78 (309)
T cd07845 4 RSVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGK----- 78 (309)
T ss_pred ccccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecC-----
Confidence 346899999999999999999999999999999999976543333334567899999999999999999887431
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+|+||||++++|.+++... ..+++..++.++.||+.||+|||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH 125 (309)
T cd07845 79 ---------------------------------HLDSIFLVMEYCEQDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH 125 (309)
T ss_pred ---------------------------------CCCeEEEEEecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 12467999999999998888753 56999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.+||+|||++....... ...+...+++.|+|||++.+...++.++
T Consensus 126 ~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~ 190 (309)
T cd07845 126 ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPA---------------KPMTPKVVTLWYRAPELLLGCTTYTTAI 190 (309)
T ss_pred hCCeecCCCCHHHEEECCCCCEEECccceeeecCCcc---------------CCCCcccccccccChhhhcCCCCcCchH
Confidence 9999999999999999999999999999998653211 0112335688999999987655689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CCC--------ccccCCHHHHHHH
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP--------SWVAKFSEQESLL 640 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~--------~~~~~~~e~~~LI 640 (1170)
|||||||++|||++ ||......+.........+. .+. .....++++.++|
T Consensus 191 DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 270 (309)
T cd07845 191 DMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLL 270 (309)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHH
Confidence 99999999999997 66655444433322221110 000 0112467889999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+||+.||.+|||+.++++|+||....
T Consensus 271 ~~ml~~dp~~R~t~~~il~h~~f~~~~ 297 (309)
T cd07845 271 NFLLMYDPKKRATAEEALESSYFKEKP 297 (309)
T ss_pred HHHhcCChhhCcCHHHHhcChhhccCC
Confidence 999999999999999999999997654
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing |
| >cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-36 Score=335.80 Aligned_cols=254 Identities=27% Similarity=0.444 Sum_probs=202.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||+|+++.+|+.||+|++..........+.+.+|+.+++.++||||++++++|..
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRR--------- 71 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEee---------
Confidence 47899999999999999999999999999999987554333344567899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCc-HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gs-L~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|++|||++++ |..++.....+++..++.++.||+.||+|||++|
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~ 120 (286)
T cd07847 72 -------------------------------KRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHN 120 (286)
T ss_pred -------------------------------CCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 35789999999874 5555555567999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||||+||+++.++.+||+|||++..+..... ......++..|+|||++.+...++.++|||
T Consensus 121 i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 185 (286)
T cd07847 121 CIHRDVKPENILITKQGQIKLCDFGFARILTGPGD---------------DYTDYVATRWYRAPELLVGDTQYGPPVDVW 185 (286)
T ss_pred ceecCCChhhEEEcCCCcEEECccccceecCCCcc---------------cccCcccccccCCHHHHhCCCCcCchhhhH
Confidence 99999999999999999999999999986532110 112346788999999987655688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCCC---------ccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELPP---------SWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p~---------~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||......+.......... ..|. .+...++.+.+||.+
T Consensus 186 slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07847 186 AIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKG 265 (286)
T ss_pred HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccccccccCCCcccccCHHHHhccCCHHHHHHHHH
Confidence 99999999997 6655443332222111000 0010 122345678999999
Q ss_pred ccCCCCCCCCCHHHHHhccCC
Q 001059 643 LMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||+.||++||++.+++.|+||
T Consensus 266 ~l~~~p~~Rp~~~eil~~~~f 286 (286)
T cd07847 266 CLQMDPTERLSCEELLEHPYF 286 (286)
T ss_pred HhcCCccccCCHHHHhcCCCC
Confidence 999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio |
| >cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-36 Score=337.11 Aligned_cols=253 Identities=28% Similarity=0.478 Sum_probs=202.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|+.++.||.|+||.||+|+++.+|+.||||.++...........+.+|+.++++++||||+++++++.
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~----------- 69 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIH----------- 69 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcc-----------
Confidence 488999999999999999999999999999998765444444467889999999999999999998762
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|++|||++++|..++.. ...+++..++.++.||+.||+|||++|
T Consensus 70 -----------------------------~~~~~~~v~e~~~~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (284)
T cd07860 70 -----------------------------TENKLYLVFEFLHQDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHR 120 (284)
T ss_pred -----------------------------cCCcEEEEeeccccCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 2356799999999899888865 346899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.+||+|||++....... .......+++.|+|||++.+...++.++|||
T Consensus 121 i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (284)
T cd07860 121 VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGCKYYSTAVDIW 185 (284)
T ss_pred eecCCCCHHHEEECCCCCEEEeeccchhhcccCc---------------cccccccccccccCCeEEecCCCCCcHHHHH
Confidence 9999999999999999999999999987543211 0112335788999999987755578899999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC------------------CC--------CccccCCHHHHHHHHHcc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------LP--------PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~------------------~p--------~~~~~~~~e~~~LI~~~L 644 (1170)
||||++|||++ ||....+...........+. .+ ......++++.++|.+||
T Consensus 186 slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 265 (284)
T cd07860 186 SLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQML 265 (284)
T ss_pred HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhc
Confidence 99999999997 66544433322222111110 00 011234568899999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 001059 645 SPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~ 663 (1170)
+.||.+|||+.++++||||
T Consensus 266 ~~~P~~Rpt~~~~l~~~~f 284 (284)
T cd07860 266 HYDPNKRISAKAALAHPFF 284 (284)
T ss_pred CCCcccCCCHHHHhcCCCC
Confidence 9999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex |
| >PHA02988 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-36 Score=337.47 Aligned_cols=243 Identities=17% Similarity=0.241 Sum_probs=198.4
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
..||+|++|.||+|.+ +|+.||||.++...... ...+.+.+|+.+|++++||||+++++++.+..
T Consensus 26 ~~i~~g~~~~v~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~------------ 91 (283)
T PHA02988 26 VLIKENDQNSIYKGIF--NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIV------------ 91 (283)
T ss_pred eEEeeCCceEEEEEEE--CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecc------------
Confidence 5799999999999988 59999999987543322 23467889999999999999999999885410
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-CCcccc
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-QGIIHR 517 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-~gIiHr 517 (1170)
....+++++||||+ |+|.+++.....+++.....++.|++.||.|||+ .+++||
T Consensus 92 ------------------------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hr 147 (283)
T PHA02988 92 ------------------------DDLPRLSLILEYCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYK 147 (283)
T ss_pred ------------------------cCCCceEEEEEeCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 12356899999997 5899999888889999999999999999999998 499999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLG 596 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlG 596 (1170)
||||+|||++.++.+||+|||+++.+... ....+||+.|+|||++.+. ..++.++||||||
T Consensus 148 dlkp~nill~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlG 209 (283)
T PHA02988 148 NLTSVSFLVTENYKLKIICHGLEKILSSP------------------PFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLG 209 (283)
T ss_pred cCChhhEEECCCCcEEEcccchHhhhccc------------------cccccCcccccCHHHhhhccccccchhhhhHHH
Confidence 99999999999999999999999864321 1234689999999998752 4689999999999
Q ss_pred HHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 597 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|++|||++ ||......+......... ..++....+++++++||.+||+.||.+|||+.++++.
T Consensus 210 vil~el~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~ 275 (283)
T PHA02988 210 VVLWEIFTGKIPFENLTTKEIYDLIINKN-NSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYN 275 (283)
T ss_pred HHHHHHHHCCCCCCCCCHHHHHHHHHhcC-CCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence 99999997 887766555544433322 2233333567899999999999999999999999864
|
|
| >PTZ00267 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-36 Score=362.56 Aligned_cols=254 Identities=26% Similarity=0.373 Sum_probs=207.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..|.+.+.||+|+||.||+|.+..+ +..||+|.+... .......+.+|+.+|+.++|||||+++++|..
T Consensus 67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~--~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~-------- 136 (478)
T PTZ00267 67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLN--DERQAAYARSELHCLAACDHFGIVKHFDDFKS-------- 136 (478)
T ss_pred eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccC--CHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEE--------
Confidence 4599999999999999999999877 788999977543 23344567889999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+++.. ...+++..+..++.||+.||+|
T Consensus 137 --------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 184 (478)
T PTZ00267 137 --------------------------------DDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDE 184 (478)
T ss_pred --------------------------------CCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 599887653 3468999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.
T Consensus 185 lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 250 (478)
T PTZ00267 185 VHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS-------------LDVASSFCGTPYYLAPELWER-KRYSK 250 (478)
T ss_pred HHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccc-------------cccccccCCCccccCHhHhCC-CCCCc
Confidence 9999999999999999999999999999999986532110 001234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|||++ ||......+....... +..++.....++++.++|.+||..||++||++.+++.|+|+..
T Consensus 251 ~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~ 328 (478)
T PTZ00267 251 KADMWSLGVILYELLTLHRPFKGPSQREIMQQVLY--GKYDPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY 328 (478)
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh--CCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence 9999999999999997 8876655554444433 2233333456779999999999999999999999999988765
Q ss_pred c
Q 001059 666 M 666 (1170)
Q Consensus 666 ~ 666 (1170)
.
T Consensus 329 ~ 329 (478)
T PTZ00267 329 V 329 (478)
T ss_pred H
Confidence 4
|
|
| >cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=340.57 Aligned_cols=249 Identities=26% Similarity=0.420 Sum_probs=188.3
Q ss_pred eeeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~--tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
.+||+|+||+||+|+++. ++..||+|.+..... ...+.+|+.+|+.++||||++++++|...
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~----~~~~~~E~~~l~~l~h~niv~~~~~~~~~------------ 70 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI----SMSACREIALLRELKHPNVIALQKVFLSH------------ 70 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCC----cHHHHHHHHHHHhCCCCCeeeEEEEEecc------------
Confidence 589999999999999764 568899998864322 34578899999999999999999887432
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---------CCCCHHHHHHHHHHHHHHHHHH
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|++|||++++|.+++... ..+++..++.++.||+.||+||
T Consensus 71 --------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~l 124 (317)
T cd07867 71 --------------------------SDRKVWLLFDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYL 124 (317)
T ss_pred --------------------------CCCeEEEEEeeeCCcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHH
Confidence 24568999999999988877421 2488999999999999999999
Q ss_pred HhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 510 HGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|++||+||||||+|||+ +.++.+||+|||+++........ ........||+.|+|||++.+...
T Consensus 125 H~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~~~------------~~~~~~~~~t~~y~aPE~~~~~~~ 192 (317)
T cd07867 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKP------------LADLDPVVVTFWYRAPELLLGARH 192 (317)
T ss_pred HhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCccc------------ccccCcceecccccCcHHhcCCCc
Confidence 99999999999999999 45678999999999865322100 011234578999999999987556
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHH---------HHHHHHhh--------------hcCCC--------------
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLK--------------QKGEL-------------- 625 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~---------~~~~~~l~--------------~~~~~-------------- 625 (1170)
++.++|||||||++|||++ ||....+. ........ .....
T Consensus 193 ~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (317)
T cd07867 193 YTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYAN 272 (317)
T ss_pred cCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCC
Confidence 8999999999999999997 55422110 00000000 00000
Q ss_pred -------CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 626 -------PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 626 -------p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
..........+.+||.+||+.||.+|||+.|+|+||||
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~hp~f 317 (317)
T cd07867 273 SSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQDPYF 317 (317)
T ss_pred chhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence 00001123457789999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as |
| >PHA03207 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=352.26 Aligned_cols=258 Identities=25% Similarity=0.341 Sum_probs=202.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...+|++++.||+|+||.||+|... .++..||+|.+... ....+|+.+|+.++||||++++++|..
T Consensus 90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-------~~~~~E~~il~~l~h~~iv~~~~~~~~----- 157 (392)
T PHA03207 90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-------KTPGREIDILKTISHRAIINLIHAYRW----- 157 (392)
T ss_pred ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-------ccHHHHHHHHHhcCCCCccceeeeEee-----
Confidence 3468999999999999999999864 35678999987532 235689999999999999999987732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++||++.++|.+++.....+++..++.++.||+.||+|||
T Consensus 158 -----------------------------------~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH 202 (392)
T PHA03207 158 -----------------------------------KSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQRRLLEALAYLH 202 (392)
T ss_pred -----------------------------------CCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999999999999977788999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++.+..... ........||+.|+|||++.+ ..++.++
T Consensus 203 ~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~~~~~ 268 (392)
T PHA03207 203 GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPD-------------TPQCYGWSGTLETNSPELLAL-DPYCAKT 268 (392)
T ss_pred HCCccccCCCHHHEEEcCCCCEEEccCccccccCcccc-------------cccccccccccCccCHhHhcC-CCCCchh
Confidence 99999999999999999999999999999986532110 011234579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcC-----------------------------CCCCcc--ccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKG-----------------------------ELPPSW--VAKF 633 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~-----------------------------~~p~~~--~~~~ 633 (1170)
|||||||++|||++ ||..... ......++...+ ..|+.. ...+
T Consensus 269 DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (392)
T PHA03207 269 DIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMH 348 (392)
T ss_pred hHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccchhHHHHHHhhcccccCCccccchhhccCcc
Confidence 99999999999986 6654321 111111111000 001100 1234
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHHH
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 671 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~~ 671 (1170)
.+++++|++||..||.+|||+.++|+||||.....+.+
T Consensus 349 ~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~~~~~ 386 (392)
T PHA03207 349 MDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEPINLL 386 (392)
T ss_pred hhHHHHHHHHhccChhhCCCHHHHhhCchhhccchhhh
Confidence 57889999999999999999999999999988776654
|
|
| >cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-36 Score=335.52 Aligned_cols=248 Identities=25% Similarity=0.379 Sum_probs=195.9
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||+|+||+||+++++.+|+.||+|.+...... ......+..|+.+++.++||||+++++++.
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~----------------- 63 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFE----------------- 63 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEe-----------------
Confidence 79999999999999999999999998643322 112334567999999999999999988762
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....+|++|||++ ++|.+++.... .+++..+..++.||+.||+|||++||+|||
T Consensus 64 -----------------------~~~~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~d 120 (277)
T cd05607 64 -----------------------SKTHLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRD 120 (277)
T ss_pred -----------------------cCCeEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEcc
Confidence 2457899999996 58888775433 588999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|||||||+
T Consensus 121 ikp~Nili~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslGv~ 183 (277)
T cd05607 121 MKPENVLLDDQGNCRLSDLGLAVELKDGK----------------TITQRAGTNGYMAPEILKE-EPYSYPVDWFAMGCS 183 (277)
T ss_pred CChHhEEEcCCCCEEEeeceeeeecCCCc----------------eeeccCCCCCccCHHHHcc-CCCCCchhHHHHHHH
Confidence 99999999999999999999987643111 1123468999999999987 458999999999999
Q ss_pred HHHhhc---CCCchhH----HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhccCCCCch
Q 001059 599 FFELWH---PFSTAME----RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQDALPPQME 667 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~----~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~~~~~~~~ 667 (1170)
+|||++ ||..... .+...... ....+......++++.+||++||+.||.+||++ .+++.|+||....
T Consensus 184 l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~~ 261 (277)
T cd05607 184 IYEMVAGRTPFKDHKEKVAKEELKRRTL--EDEVKFEHQNFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTIN 261 (277)
T ss_pred HHHHHhCCCCCCCCcchhhHHHHHHHhh--ccccccccccCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCCC
Confidence 999997 7754322 11111111 112222233567899999999999999999999 6788999998876
Q ss_pred HH
Q 001059 668 YE 669 (1170)
Q Consensus 668 ~~ 669 (1170)
+.
T Consensus 262 ~~ 263 (277)
T cd05607 262 FP 263 (277)
T ss_pred HH
Confidence 54
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr |
| >KOG0586 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-36 Score=350.71 Aligned_cols=258 Identities=27% Similarity=0.447 Sum_probs=224.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+.-...|.+...||+|.|++|.+|++..+|..||||.|+.........+.+.+|+++|+.++|||||+++.+..
T Consensus 52 ~~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~------ 125 (596)
T KOG0586|consen 52 SNSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIE------ 125 (596)
T ss_pred cccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeee------
Confidence 34467899999999999999999999999999999999877666666677999999999999999999998762
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|+||||+. |.+.+++...+++.+..+..++.|+++|++||
T Consensus 126 ----------------------------------t~~~lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYc 171 (596)
T KOG0586|consen 126 ----------------------------------TEATLYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYC 171 (596)
T ss_pred ----------------------------------ecceeEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHH
Confidence 2568999999995 79999999999999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+++|||||||.+|||++.+.++||+|||++.++..... ..+.||++.|+|||++.+..+.++.
T Consensus 172 H~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~----------------lqt~cgsppyAaPEl~~g~~y~gpe 235 (596)
T KOG0586|consen 172 HSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLM----------------LQTFCGSPPYAAPELFNGKKYDGPE 235 (596)
T ss_pred hhcceeccccchhhcccccccceeeeccccceeeccccc----------------ccccCCCCCccChHhhcCcccCCcc
Confidence 999999999999999999999999999999998754332 2457999999999999998878899
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|+||+|++||-|+. ||.+..-.+.....+..+..+|-.. +.++.++|+++|-.+|.+|++.+++..|.|..-.
T Consensus 236 ~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~~m---s~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~ 312 (596)
T KOG0586|consen 236 VDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPFYM---SCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDL 312 (596)
T ss_pred eehhhhhhhheeeeecccccCCcccccccchheeeeeccccee---echhHHHHHHhhccCccccCCHHHhhhhcccchh
Confidence 999999999999986 9987665555555555566666543 3489999999999999999999999999987654
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 313 ~ 313 (596)
T KOG0586|consen 313 L 313 (596)
T ss_pred h
Confidence 3
|
|
| >cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=334.84 Aligned_cols=255 Identities=29% Similarity=0.451 Sum_probs=212.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|.+..+++.||+|++..... .......+.+|+.++++++||||+++++++.+
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQD-------- 72 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEc--------
Confidence 479999999999999999999999999999999875332 22345678899999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeecc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||+ +++|.+++.....+++..+..++.||+.||.|||++
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~ 120 (290)
T cd05580 73 --------------------------------DSNLYLVMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSL 120 (290)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 45789999999 469999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||+|+|||++.++.+||+|||++...... .....|++.|+|||.+.+ ..++.++||
T Consensus 121 ~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~Di 181 (290)
T cd05580 121 DIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR------------------TYTLCGTPEYLAPEIILS-KGYGKAVDW 181 (290)
T ss_pred CEecCCCCHHHEEECCCCCEEEeeCCCccccCCC------------------CCCCCCCccccChhhhcC-CCCCccccH
Confidence 9999999999999999999999999998764211 123468999999999877 467899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~ 664 (1170)
||||+++|+|++ ||..................+|. ..++.++++|.+||..||.+|+ +++++++|+|+.
T Consensus 182 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~ 258 (290)
T cd05580 182 WALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFPS---FFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFA 258 (290)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCCc---cCCHHHHHHHHHHccCCHHHccCcccCCHHHHHcCcccc
Confidence 999999999997 77655544433333332333333 3467899999999999999999 999999999998
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...+...
T Consensus 259 ~~~~~~~ 265 (290)
T cd05580 259 GIDWIAL 265 (290)
T ss_pred cCCHHHH
Confidence 8875543
|
Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi |
| >KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-37 Score=352.47 Aligned_cols=248 Identities=29% Similarity=0.429 Sum_probs=207.1
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
+||+|.||+||-|+++.|...+|||.|..++ .+..+-+.+|+.+.+.|+|.|||+|+|++-+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd--sr~~QPLhEEIaLH~~LrHkNIVrYLGs~se---------------- 643 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD--SREVQPLHEEIALHSTLRHKNIVRYLGSVSE---------------- 643 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeeccccc--chhhccHHHHHHHHHHHhhHhHHHHhhccCC----------------
Confidence 6999999999999999999999999986543 3456678899999999999999999998732
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHF--DKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l--~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
..++-|.||-+| |+|..+|+.. +++ .+...-.|.+||++||.|||.+.||||
T Consensus 644 ------------------------nGf~kIFMEqVPGGSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHR 699 (1226)
T KOG4279|consen 644 ------------------------NGFFKIFMEQVPGGSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHR 699 (1226)
T ss_pred ------------------------CCeEEEEeecCCCCcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeec
Confidence 347789999997 5999998754 566 788889999999999999999999999
Q ss_pred CCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc-CCCCCCccchhHHH
Q 001059 518 DLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ-GWPKIDEKADMYSL 595 (1170)
Q Consensus 518 DLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~-~~~~~~~ksDIwSl 595 (1170)
|||-+|+||+. .|.+||+|||-++.+.. ......++.||..|||||++. |...|+.++|||||
T Consensus 700 DIKGDNVLvNTySGvlKISDFGTsKRLAg---------------inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~ 764 (1226)
T KOG4279|consen 700 DIKGDNVLVNTYSGVLKISDFGTSKRLAG---------------INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSF 764 (1226)
T ss_pred cccCCcEEEeeccceEEecccccchhhcc---------------CCccccccccchhhhChHhhccCCcCCCchhhhhhc
Confidence 99999999974 69999999999997632 223346688999999999985 44559999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||++.||.| ||......+..+-.+-.-...|+.+...+.++++||.+|+.+||.+||+|.++|++||.+..
T Consensus 765 GCT~vEMATGrPPF~ElgspqAAMFkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~ 838 (1226)
T KOG4279|consen 765 GCTMVEMATGRPPFVELGSPQAAMFKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHN 838 (1226)
T ss_pred cceeEeeccCCCCeeecCChhHhhhhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccC
Confidence 999999998 88766555554443333334566666677799999999999999999999999999987655
|
|
| >cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=335.85 Aligned_cols=275 Identities=23% Similarity=0.355 Sum_probs=214.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||++.++.+++.||+|.+..... .......+.+|+.+++.++||||+++++++.
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~--------- 71 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFE--------- 71 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEe---------
Confidence 479999999999999999999999999999999875432 1233457889999999999999999998773
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++|++|||++ ++|.+++.....+++..+..++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 120 (305)
T cd05609 72 -------------------------------TKRHLCMVMEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNY 120 (305)
T ss_pred -------------------------------cCCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 2457899999997 49999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||+++............................|++.|+|||.+.+ ..++.++|+
T Consensus 121 ~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 199 (305)
T cd05609 121 GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILR-QGYGKPVDW 199 (305)
T ss_pred CccccCCchHHEEECCCCCEEEeeCCCccccCcCccccccccccccchhhccccCCccCccccCchhccC-CCCCchhhH
Confidence 9999999999999999999999999998742211100000000000000111223468899999999876 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC---HHHHHhccCCCCc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATELLQDALPPQM 666 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt---a~eiL~~~~~~~~ 666 (1170)
|||||++|||++ ||......+............|......++++.++|++||+.||.+||+ +.++++|+|+...
T Consensus 200 ~slG~vl~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~ 279 (305)
T cd05609 200 WAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL 279 (305)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCccccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence 999999999997 7766555444444333333334333356778999999999999999997 7999999999877
Q ss_pred hHHH
Q 001059 667 EYEL 670 (1170)
Q Consensus 667 ~~~~ 670 (1170)
.+..
T Consensus 280 ~~~~ 283 (305)
T cd05609 280 DWNG 283 (305)
T ss_pred CHHH
Confidence 6543
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a |
| >cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-35 Score=342.83 Aligned_cols=264 Identities=19% Similarity=0.284 Sum_probs=201.7
Q ss_pred EEeeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 359 ELQPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 359 ~~~~LG~G--~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
++++||+| +||+||++.++.+|+.||+|.++...........+.+|+.+++.++||||++++++|..
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~----------- 70 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIA----------- 70 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEE-----------
Confidence 46789999 78999999999999999999997665544555678889999999999999999988843
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+|||++|
T Consensus 71 -----------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ 121 (327)
T cd08227 71 -----------------------------DNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMG 121 (327)
T ss_pred -----------------------------CCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356899999997 589888864 345899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchh
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADM 592 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDI 592 (1170)
|+||||||+|||++.++.++++|||.+.......... .. .........++..|+|||++.+. ..++.++||
T Consensus 122 iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~--~~------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di 193 (327)
T cd08227 122 YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL--RV------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 193 (327)
T ss_pred EecCCCChhhEEEecCCcEEEcccchhhccccccccc--cc------cccccccccceecccChHHhhcccCCCCchhhH
Confidence 9999999999999999999999998765432111000 00 00001223578889999998753 358899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------C------------------------------------C
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------L------------------------------------P 626 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------~------------------------------------p 626 (1170)
|||||++|||++ ||.................. . .
T Consensus 194 wslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (327)
T cd08227 194 YSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSH 273 (327)
T ss_pred HHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCccccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCccc
Confidence 999999999997 77644333322222111000 0 0
Q ss_pred CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHH
Q 001059 627 PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYEL 670 (1170)
Q Consensus 627 ~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~ 670 (1170)
+.....++++.+||.+||+.||++|||++++++||||.+.....
T Consensus 274 ~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p~f~~~~~~~ 317 (327)
T cd08227 274 PYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRA 317 (327)
T ss_pred ccccccCHHHHHHHHHHHhhCchhcCCHHHHhcChhhhhcchhh
Confidence 01112356789999999999999999999999999998765443
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype |
| >PHA03211 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-35 Score=356.16 Aligned_cols=249 Identities=27% Similarity=0.337 Sum_probs=196.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
...|.+.+.||+|+||.||+|.+..+++.||||... ...+.+|+.+|++++|||||++++++..
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~--------~~~~~~E~~iL~~L~HpnIv~l~~~~~~-------- 231 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW--------YASSVHEARLLRRLSHPAVLALLDVRVV-------- 231 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc--------ccCHHHHHHHHHHCCCCCCCcEEEEEEE--------
Confidence 457999999999999999999999999999999642 1235689999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++||++.++|..++... ..+++..++.++.||+.||+|||++
T Consensus 232 --------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~ 279 (461)
T PHA03211 232 --------------------------------GGLTCLVLPKYRSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGE 279 (461)
T ss_pred --------------------------------CCEEEEEEEccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467899999999999888654 4699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++.+..... .......+||+.|+|||++.+ ..++.++||
T Consensus 280 gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~-------------~~~~~~~~GT~~Y~APE~~~~-~~~~~~sDv 345 (461)
T PHA03211 280 GIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS-------------TPFHYGIAGTVDTNAPEVLAG-DPYTPSVDI 345 (461)
T ss_pred CEEECcCCHHHEEECCCCCEEEcccCCceecccccc-------------cccccccCCCcCCcCHHHHcC-CCCCchHHH
Confidence 999999999999999999999999999986532110 001134579999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCCch--------hHHHHHHHHhhhcC----CCC-------------------------Cccc--
Q 001059 593 YSLGIVFFELWH---PFSTA--------MERQIVLSDLKQKG----ELP-------------------------PSWV-- 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~--------~~~~~~~~~l~~~~----~~p-------------------------~~~~-- 630 (1170)
|||||+||||++ |+... ...+ ...++.... .++ +.|.
T Consensus 346 wSlGviL~El~~g~~~lf~~~~~~~~~~~~~~-l~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 424 (461)
T PHA03211 346 WSAGLVIFEAAVHTASLFSASRGDERRPYDAQ-ILRIIRQAQVHVDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRY 424 (461)
T ss_pred HHHHHHHHHHHHcCCCcccCCcccccCCcHHH-HHHHHHhhccccccCCCCcchHHHHHHHhhhhcccCCccCCcchhhh
Confidence 999999999974 22211 1111 111111100 001 1111
Q ss_pred -cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 631 -AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 631 -~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
...+++.+||.+||+.||.+|||+.|+|+|+||..
T Consensus 425 ~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~ 460 (461)
T PHA03211 425 YKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS 460 (461)
T ss_pred ccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence 23457889999999999999999999999999975
|
|
| >cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-36 Score=332.92 Aligned_cols=252 Identities=23% Similarity=0.426 Sum_probs=202.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+..+++.||+|+++.... .....+.+|+.+++.++||||+++++++..
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~--~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~-------- 77 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG--EDFAVVQQEIIMMKDCKHSNIVAYFGSYLR-------- 77 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch--hHHHHHHHHHHHHHhCCCCCeeeEEEEEEe--------
Confidence 3689999999999999999999999999999999875432 234567889999999999999999988733
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++||||+ ++|.+++...+.+++.+++.++.|++.||+|||++
T Consensus 78 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 125 (267)
T cd06645 78 --------------------------------RDKLWICMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSK 125 (267)
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 59999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
|++|+||||+||+++.++.+||+|||++....... .......||+.|+|||++.. ...++.++
T Consensus 126 ~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 190 (267)
T cd06645 126 GKMHRDIKGANILLTDNGHVKLADFGVSAQITATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYNQLC 190 (267)
T ss_pred CeecCCCCHHHEEECCCCCEEECcceeeeEccCcc---------------cccccccCcccccChhhhccccCCCCCchh
Confidence 99999999999999999999999999987542110 01234578999999998742 24578999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~--~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|+|||||++|+|++ ||....+..............+. .....+..+.++|.+||+.+|++||+++++++|||
T Consensus 191 DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~ 267 (267)
T cd06645 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF 267 (267)
T ss_pred hhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCcccccCCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence 99999999999987 66544333332222221111111 11234568899999999999999999999999997
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-37 Score=334.48 Aligned_cols=264 Identities=25% Similarity=0.394 Sum_probs=223.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
..-..+|..+.+||+|+||+|.+|..+.+.+.||||+++..-. ...+.+.-..|-.+|+.. +-|.+++++.||
T Consensus 345 ~i~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF----- 419 (683)
T KOG0696|consen 345 RIKATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF----- 419 (683)
T ss_pred ceeecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh-----
Confidence 4456899999999999999999999999999999999875321 112233445677777666 467888888776
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
+....+|+||||+. |+|...+++.++|.++.|..|+.+|+-||-
T Consensus 420 -----------------------------------QTmDRLyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLF 464 (683)
T KOG0696|consen 420 -----------------------------------QTMDRLYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLF 464 (683)
T ss_pred -----------------------------------hhhhheeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhh
Confidence 34578999999995 699999999999999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|||+||||.+|||++.+|++||+|||+++.---+ ..+..++||||.|+|||++.. +.|+
T Consensus 465 FLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~---------------~~TTkTFCGTPdYiAPEIi~Y-qPYg 528 (683)
T KOG0696|consen 465 FLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFD---------------GVTTKTFCGTPDYIAPEIIAY-QPYG 528 (683)
T ss_pred hhhcCCeeeeeccccceEeccCCceEeeecccccccccC---------------CcceeeecCCCcccccceEEe-cccc
Confidence 999999999999999999999999999999999842111 123467899999999999987 6799
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHh
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQ 659 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~ 659 (1170)
.++|+||+||+||||+. ||.+.++.+....+...+...|.+++ .++.++.+.+|.+.|.+|.. -.+|-.
T Consensus 529 ksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPKslS---kEAv~ickg~ltK~P~kRLGcg~~ge~di~~ 605 (683)
T KOG0696|consen 529 KSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPKSLS---KEAVAICKGLLTKHPGKRLGCGPEGERDIRE 605 (683)
T ss_pred cchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCccccc---HHHHHHHHHHhhcCCccccCCCCccccchhh
Confidence 99999999999999995 99999999999988888888887654 59999999999999999974 467899
Q ss_pred ccCCCCchHHHHHH
Q 001059 660 DALPPQMEYELLDN 673 (1170)
Q Consensus 660 ~~~~~~~~~~~~~~ 673 (1170)
||||....|+-+..
T Consensus 606 H~FFR~iDWek~E~ 619 (683)
T KOG0696|consen 606 HPFFRRIDWEKLER 619 (683)
T ss_pred CcchhhccHHHHhh
Confidence 99999999886544
|
|
| >cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=336.87 Aligned_cols=257 Identities=29% Similarity=0.433 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||.||+|.++.+++.||+|.++...........+.+|+.++++++||||+++++++...
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~------- 76 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGS------- 76 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEec-------
Confidence 4689999999999999999999999999999999986554434445678899999999999999999887432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
+...+|++|||++++|.+++.... .+++..++.++.||+.||+|||++
T Consensus 77 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 125 (293)
T cd07843 77 -------------------------------NLDKIYMVMEYVEHDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDN 125 (293)
T ss_pred -------------------------------CCCcEEEEehhcCcCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 135789999999999999887644 589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+|||++.++.+||+|||++....... .......+++.|+|||++.+...++.++||
T Consensus 126 ~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di 190 (293)
T cd07843 126 WILHRDLKTSNLLLNNRGILKICDFGLAREYGSPL---------------KPYTQLVVTLWYRAPELLLGAKEYSTAIDM 190 (293)
T ss_pred CeeeccCCHHHEEECCCCcEEEeecCceeeccCCc---------------cccccccccccccCchhhcCCccccchhhH
Confidence 99999999999999999999999999998653221 011234678999999998775557899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC---------------------------CCCcccc--CCHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------------LPPSWVA--KFSEQESLL 640 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~---------------------------~p~~~~~--~~~e~~~LI 640 (1170)
||||+++|+|++ ||................+. +...+.. .++.+.++|
T Consensus 191 ~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 270 (293)
T cd07843 191 WSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLL 270 (293)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhhccchhcccccccccchhhhccccccCCChHHHHHH
Confidence 999999999997 55543332222211110000 0011112 356789999
Q ss_pred HHccCCCCCCCCCHHHHHhccCC
Q 001059 641 RRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
++||+.||++|||+.++++|+||
T Consensus 271 ~~~l~~~p~~R~t~~ell~~~~f 293 (293)
T cd07843 271 NRLLTYDPAKRISAEDALKHPYF 293 (293)
T ss_pred HHHhccCccccCCHHHHhcCCCC
Confidence 99999999999999999999997
|
Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the |
| >cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-36 Score=345.60 Aligned_cols=266 Identities=24% Similarity=0.398 Sum_probs=210.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.++.+|+.||+|++............+.+|+.+|+.++||||++++++|....
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------- 77 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPG------- 77 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccC-------
Confidence 6899999999999999999999999999999999765444445567889999999999999999987763210
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
.....+|+||||++++|.+++.....+++..++.++.||+.||+|||++||
T Consensus 78 -----------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i 128 (334)
T cd07855 78 -----------------------------ADFKDVYVVMDLMESDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANV 128 (334)
T ss_pred -----------------------------CCCceEEEEEehhhhhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 124578999999999999999887889999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+|||++.++.+||+|||++......... .........|+..|+|||.+.+...++.++||||
T Consensus 129 vH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-----------~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~s 197 (334)
T cd07855 129 IHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTE-----------HKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWS 197 (334)
T ss_pred ecCCCCHHHEEEcCCCcEEecccccceeecccCcC-----------CCcccccccccccccChHHhcCCcccccccchHH
Confidence 99999999999999999999999999765322110 0011134578999999999876556899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhh-----------------------cCCCCC-----ccccCCHHHHHHHHHc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQ-----------------------KGELPP-----SWVAKFSEQESLLRRL 643 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~-----------------------~~~~p~-----~~~~~~~e~~~LI~~~ 643 (1170)
|||++|||++ ||............... ....++ .....++++.++|++|
T Consensus 198 lG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 277 (334)
T cd07855 198 VGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQM 277 (334)
T ss_pred HHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHH
Confidence 9999999996 66443221111110000 000001 1134567899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 001059 644 MSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|+.+|.+|||+.++++|+|+.+..
T Consensus 278 l~~~P~~Rpt~~~~l~~~~~~~~~ 301 (334)
T cd07855 278 LQFDPEERITVEQALQHPFLAQYH 301 (334)
T ss_pred ccCChhhCcCHHHHHhChhhhhcc
Confidence 999999999999999999998765
|
Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the |
| >cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-35 Score=328.01 Aligned_cols=257 Identities=23% Similarity=0.396 Sum_probs=206.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+|++.+.||.|+||+||+|... +|+.+|+|.+...... ......+.+|+.+|+.++||||++++++|.+
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~-~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------ 73 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTN-QGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLD------ 73 (265)
T ss_pred CccccceEeccCCeEEEEEEEc-CCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeec------
Confidence 4778899999999999999874 7899999998754322 2233568899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.+...+++..++.++.||+.||+|||
T Consensus 74 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 119 (265)
T cd06631 74 ----------------------------------DNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLH 119 (265)
T ss_pred ----------------------------------CCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999997 499999988788999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.||+|+||||+||+++.++.+||+|||++.......... ..........|++.|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~pe~~~~-~~~~~~~ 189 (265)
T cd06631 120 NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHG---------THSNMLKSMHGTPYWMAPEVINE-SGYGRKS 189 (265)
T ss_pred hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccc---------cccccccccCCCccccChhhhcC-CCCcchh
Confidence 9999999999999999999999999999998653211000 00111234568999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||||++|+|++ ||...................++.....+.++.++|++||+.+|.+||++.++++|||+
T Consensus 190 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~ 265 (265)
T cd06631 190 DIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265 (265)
T ss_pred hHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence 99999999999997 77654443333333332233444445567789999999999999999999999999996
|
Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. |
| >cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=337.59 Aligned_cols=252 Identities=26% Similarity=0.414 Sum_probs=203.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||++.+..+|..||+|.++... ......++.+|+.+++.++||||++++++|..
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEI-KPAIRNQIIRELKVLHECNSPYIVGFYGAFYS--------- 70 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEecccc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---------
Confidence 47999999999999999999999999999999987532 33445678899999999999999999998843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-~ 512 (1170)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||+ +
T Consensus 71 -------------------------------~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ 119 (308)
T cd06615 71 -------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKH 119 (308)
T ss_pred -------------------------------CCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhC
Confidence 357899999997 5999999888889999999999999999999998 5
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
+++||||||+|||++.++.+||+|||++...... .....+|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~~~aPE~~~~-~~~~~~~Di 181 (308)
T cd06615 120 KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS-----------------MANSFVGTRSYMSPERLQG-THYTVQSDI 181 (308)
T ss_pred CEEECCCChHHEEEecCCcEEEccCCCccccccc-----------------ccccCCCCcCccChhHhcC-CCCCccchH
Confidence 8999999999999999999999999998754211 0133578999999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------------------------CCCCc--cccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------------------------ELPPS--WVAKF 633 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------------------------~~p~~--~~~~~ 633 (1170)
|||||++|+|++ ||......... ....... ..++. ....+
T Consensus 182 wslG~~l~~l~~g~~p~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (308)
T cd06615 182 WSLGLSLVEMAIGRYPIPPPDAKELE-AMFGRPVSEGEAKESHRPVSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFS 260 (308)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhHH-HhhcCccccccccCCcccccCCCCCccchhhHHHHHHHHhcCCCccCcCcccC
Confidence 999999999997 66433221111 1110000 00010 01245
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+++.+||.+||..||++|||+.++++|+|+.+.
T Consensus 261 ~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~ 293 (308)
T cd06615 261 DEFQDFVDKCLKKNPKERADLKELTKHPFIKRA 293 (308)
T ss_pred HHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence 689999999999999999999999999999764
|
Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down |
| >KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=338.69 Aligned_cols=266 Identities=28% Similarity=0.424 Sum_probs=217.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh-hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+.|...++||+||||.||-|+.+.||+.||+|++.++..... -....++|-.+|.+++.|.||.+-.+|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAf--------- 254 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAF--------- 254 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeee---------
Confidence 4788999999999999999999999999999999865442222 234578899999999999999987666
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yL 509 (1170)
+....+++||..|. |+|.-++-+.+ .|+++.++.|+.+|+.||++|
T Consensus 255 -------------------------------eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehl 303 (591)
T KOG0986|consen 255 -------------------------------ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHL 303 (591)
T ss_pred -------------------------------cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHH
Confidence 23578999999996 59988876655 799999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|..+||+|||||+|||+|+.|+++|+|.|+|..+.... ..++.+||.+|||||++++ ..|+..
T Consensus 304 H~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~----------------~~~~rvGT~GYMAPEvl~n-e~Y~~s 366 (591)
T KOG0986|consen 304 HRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGK----------------PIRGRVGTVGYMAPEVLQN-EVYDFS 366 (591)
T ss_pred HhcceeeccCChhheeeccCCCeEeeccceEEecCCCC----------------ccccccCcccccCHHHHcC-CcccCC
Confidence 99999999999999999999999999999999764332 1355699999999999998 559999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHH----HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATEL 657 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~----~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~ei 657 (1170)
.|+|||||+||||+. ||....+. ++....+.....++ ...++++++|.+.+|++||.+|. ++.++
T Consensus 367 ~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~---~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~ev 443 (591)
T KOG0986|consen 367 PDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS---DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEV 443 (591)
T ss_pred ccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc---cccCHHHHHHHHHHHccCHHHhccCCCcCcchh
Confidence 999999999999994 88765442 23333333333344 35567999999999999999997 67899
Q ss_pred HhccCCCCchHHHHHHHHHhcCCC
Q 001059 658 LQDALPPQMEYELLDNILRMMHSS 681 (1170)
Q Consensus 658 L~~~~~~~~~~~~~~~~~~~~~~~ 681 (1170)
.+||||+.+.|.-+ ...++.+|
T Consensus 444 k~HpfFk~lnw~rl--eagml~PP 465 (591)
T KOG0986|consen 444 KEHPFFKDLNWRRL--EAGMLEPP 465 (591)
T ss_pred hhCcccccCCHhHH--hccCCCCC
Confidence 99999999887644 33444433
|
|
| >cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=332.31 Aligned_cols=252 Identities=25% Similarity=0.384 Sum_probs=200.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||.||+|.+..+++.||+|++... ........+.+|+.++++++||||+++++++..
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--------- 70 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLD-ITVELQKQIMSELEILYKCDSPYIIGFYGAFFV--------- 70 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecC-CChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEE---------
Confidence 4788999999999999999999999999999998754 233445678999999999999999999998743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+++|||+++ +|... ..+++..+..++.||+.||+|||++|
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lH~~~ 115 (279)
T cd06619 71 -------------------------------ENRISICTEFMDGGSLDVY----RKIPEHVLGRIAVAVVKGLTYLWSLK 115 (279)
T ss_pred -------------------------------CCEEEEEEecCCCCChHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3567899999986 55433 35789999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+|+||||+|||++.++.+||+|||++...... ..+..+||+.|+|||++.+ ..++.++|+|
T Consensus 116 i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dvw 177 (279)
T cd06619 116 ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS-----------------IAKTYVGTNAYMAPERISG-EQYGIHSDVW 177 (279)
T ss_pred EeeCCCCHHHEEECCCCCEEEeeCCcceecccc-----------------cccCCCCChhhcCceeecC-CCCCCcchHH
Confidence 999999999999999999999999999754211 1234579999999999987 5689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHH------HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 594 SLGIVFFELWH---PFSTAMERQ------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~------~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
||||++|+|++ ||....... ...................++++.++|.+||+.||.+||++.++++|+|+.
T Consensus 178 slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~ 257 (279)
T cd06619 178 SLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIV 257 (279)
T ss_pred HHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCcccc
Confidence 99999999997 665322110 111111111111111233567899999999999999999999999999998
Q ss_pred CchHH
Q 001059 665 QMEYE 669 (1170)
Q Consensus 665 ~~~~~ 669 (1170)
+....
T Consensus 258 ~~~~~ 262 (279)
T cd06619 258 QYNDG 262 (279)
T ss_pred cccCc
Confidence 76543
|
Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p |
| >cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=332.57 Aligned_cols=256 Identities=25% Similarity=0.374 Sum_probs=200.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHH-HHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~i-L~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++++.||+|+||.||+|.++.+|+.||||.++...... ...++..|+.. ++.++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~-~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~-------- 71 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ-EQKRLLMDLDISMRSVDCPYTVTFYGALFR-------- 71 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH-HHHHHHHHHHHHHHHcCCCCeeeeeEEEec--------
Confidence 47999999999999999999999999999999987654332 23456666665 666799999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++|||++++|.+++.. ...+++..++.++.||+.||+||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~l 119 (283)
T cd06617 72 --------------------------------EGDVWICMEVMDTSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYL 119 (283)
T ss_pred --------------------------------CCcEEEEhhhhcccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999999988877753 24689999999999999999999
Q ss_pred HhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CC
Q 001059 510 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PK 585 (1170)
Q Consensus 510 Hs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~ 585 (1170)
|++ +++||||||+|||++.++.+||+|||++....... ..+...|+..|+|||++.+. ..
T Consensus 120 H~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~ 183 (283)
T cd06617 120 HSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSV----------------AKTIDAGCKPYMAPERINPELNQKG 183 (283)
T ss_pred hhcCCeecCCCCHHHEEECCCCCEEEeeccccccccccc----------------ccccccCCccccChhhcCCcccccc
Confidence 997 99999999999999999999999999987642110 11234688999999988642 23
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCCCc-cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~-~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.++|+|||||++|+|++ ||..... .+....... ...+.. ....+.++.++|.+||..+|.+||++.++++|
T Consensus 184 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 184 YDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVE--EPSPQLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred cCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHh--cCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 6889999999999999997 6653222 122222221 111111 12356789999999999999999999999999
Q ss_pred cCCCCchHH
Q 001059 661 ALPPQMEYE 669 (1170)
Q Consensus 661 ~~~~~~~~~ 669 (1170)
+|+......
T Consensus 262 ~~~~~~~~~ 270 (283)
T cd06617 262 PFFELHLSK 270 (283)
T ss_pred chhhhcccc
Confidence 999887543
|
Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs |
| >KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-36 Score=351.56 Aligned_cols=250 Identities=28% Similarity=0.404 Sum_probs=200.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-C-----CCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H-----QHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-H-----pnIV~l~~~~~e~~~~ 429 (1170)
+|++.+.||+|+||.|.+|.+..|++.||||+++.+ .....+...|+.+|..|+ | -|+|+++++|+.
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~---k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f---- 259 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK---KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF---- 259 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC---hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc----
Confidence 899999999999999999999999999999999743 345667788999999997 4 489999999842
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~ 507 (1170)
..++|||+|.+..+|++++.... +++...++.|+.||+.||.
T Consensus 260 ------------------------------------r~HlciVfELL~~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~ 303 (586)
T KOG0667|consen 260 ------------------------------------RNHLCIVFELLSTNLYELLKNNKFRGLSLPLVRKFAQQILTALL 303 (586)
T ss_pred ------------------------------------ccceeeeehhhhhhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHH
Confidence 57899999999999999998654 6999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCC--CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
+||..||||+||||+||||.+. ..|||+|||.|++.... ..+++-+..|.|||++.| ..
T Consensus 304 ~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~------------------vytYiQSRfYRAPEVILG-lp 364 (586)
T KOG0667|consen 304 FLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQR------------------VYTYIQSRFYRAPEVILG-LP 364 (586)
T ss_pred HHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCc------------------ceeeeeccccccchhhcc-CC
Confidence 9999999999999999999764 57999999999975322 124577889999999999 57
Q ss_pred CCccchhHHHHHHHHHhhc--CCCch-hHHHHHHHHhhhcC---------------------------------------
Q 001059 586 IDEKADMYSLGIVFFELWH--PFSTA-MERQIVLSDLKQKG--------------------------------------- 623 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt--Pf~~~-~~~~~~~~~l~~~~--------------------------------------- 623 (1170)
|+.+.||||||||+.||++ |+.+. ++.+.+..+..--+
T Consensus 365 Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~~~~~~kff~~~~~~~~~~~~~~~~~~~k~~ 444 (586)
T KOG0667|consen 365 YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDTAKKAHKFFTSLKGFPRLCVETSAPRGTKSP 444 (586)
T ss_pred CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHhccccceehhccCCceeeeeeecccccccch
Confidence 9999999999999999997 44333 22222211111000
Q ss_pred -------------CCCCc---cc-----cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 624 -------------ELPPS---WV-----AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 624 -------------~~p~~---~~-----~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
..|+. +. ..-..+.+||++||..||.+|+|+.++|+|||+....
T Consensus 445 ~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~tp~qal~Hpfl~~~~ 509 (586)
T KOG0667|consen 445 EVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERITPAQALNHPFLTGTS 509 (586)
T ss_pred hhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcCCHHHHhcCccccccc
Confidence 01100 00 0012457999999999999999999999999998654
|
|
| >cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=326.78 Aligned_cols=257 Identities=26% Similarity=0.427 Sum_probs=208.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||+||+|.+..++..+|+|++....... ....+.+|+.+|+.++||||+++++.+..
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQT-SVDELRKEVQAMSQCNHPNVVKYYTSFVV--------- 70 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcch-HHHHHHHHHHHHHhcCCCCEEEEEEEEee---------
Confidence 47999999999999999999999899999999987554433 56789999999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh 119 (267)
T cd06610 71 -------------------------------GDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH 119 (267)
T ss_pred -------------------------------CCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456899999997 5898888753 45899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||++++++.+||+|||++..+....... .......+|++.|+|||++.....++.++
T Consensus 120 ~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~-----------~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~ 188 (267)
T cd06610 120 SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRT-----------RKVRKTFVGTPCWMAPEVMEQVHGYDFKA 188 (267)
T ss_pred hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCcccc-----------ccccccccCChhhcChHHHccccCcCccc
Confidence 9999999999999999999999999999998764322110 00123346899999999988744689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CCCc--cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPS--WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~--~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+|||||++|+|++ ||.................. .+.. +...++.+.+++.+||..||.+||++.++++||||
T Consensus 189 Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~ 267 (267)
T cd06610 189 DIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF 267 (267)
T ss_pred chHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence 99999999999997 77655554444443332211 1111 13556788999999999999999999999999997
|
Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 |
| >cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=326.47 Aligned_cols=257 Identities=28% Similarity=0.451 Sum_probs=205.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||+|+||.||+|.+..+|..||||.+...... ......+.+|+.+++.++||||++++++|.+.
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~----- 76 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDP----- 76 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccC-----
Confidence 5899999999999999999999999999999998654322 23346788999999999999999999887432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+|++|||++ ++|.+++.....+++..+..++.|++.||+|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH 123 (265)
T cd06652 77 ---------------------------------MERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLH 123 (265)
T ss_pred ---------------------------------CCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1346789999997 589999888778999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||||+|||++.++.+||+|||+++........ ........|+..|+|||++.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (265)
T cd06652 124 SNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLS------------GTGMKSVTGTPYWMSPEVISG-EGYGRKA 190 (265)
T ss_pred hCCEecCCCCHHHEEecCCCCEEECcCcccccccccccc------------ccccccCCCCccccChhhhcC-CCCCcch
Confidence 999999999999999999999999999999865321100 001123468999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|||||||++|||++ ||.............. ....+......+..+.++|.+||. +|.+||+++++++|+|+.
T Consensus 191 Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~ 265 (265)
T cd06652 191 DIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIAT-QPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH 265 (265)
T ss_pred hHHHHHHHHHHHhhCCCCCCccchHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence 99999999999996 7765444333333222 222233333455678999999995 999999999999999963
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re |
| >cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=331.17 Aligned_cols=255 Identities=29% Similarity=0.463 Sum_probs=204.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPH---------- 70 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEec----------
Confidence 5889999999999999999999999999999998765444456779999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+|+||||++++|.+++.. ...+++.+++.++.||+.||+|||++|+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i 120 (286)
T cd07832 71 ------------------------------GSGFVLVMEYMPSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGI 120 (286)
T ss_pred ------------------------------CCeeEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 457899999997799998864 4569999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+|+||||+||+++.++.++|+|||++........ .......|+..|+|||++.+...++.++||||
T Consensus 121 ~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 186 (286)
T cd07832 121 MHRDLKPANLLISADGVLKIADFGLARLFSEEEP--------------RLYSHQVATRWYRAPELLYGARKYDPGVDLWA 186 (286)
T ss_pred ecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC--------------CccccccCcccccCceeeeccccCCchhHHHH
Confidence 9999999999999999999999999986532110 01123478999999999876556789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CC--------CccccCCHHHHHHHHHcc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LP--------PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p--------~~~~~~~~e~~~LI~~~L 644 (1170)
+||++|||++ ||....+.......+...+. .+ ......+.++.++|.+||
T Consensus 187 lG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 266 (286)
T cd07832 187 VGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLL 266 (286)
T ss_pred HHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHh
Confidence 9999999997 44433332222221111000 00 011234568899999999
Q ss_pred CCCCCCCCCHHHHHhccCCC
Q 001059 645 SPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~~ 664 (1170)
+.||.+|||++++++|+||.
T Consensus 267 ~~~p~~R~~~~~~l~h~~~~ 286 (286)
T cd07832 267 VYDPSKRLSAAEALRHPYFT 286 (286)
T ss_pred ccChhhCCCHHHHhhCcCcC
Confidence 99999999999999999973
|
Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea |
| >cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-35 Score=345.95 Aligned_cols=261 Identities=28% Similarity=0.409 Sum_probs=204.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 88 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQK----- 88 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCC-----
Confidence 357899999999999999999999999999999998754444445567889999999999999999998874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+...+|+|||||+++|.+.+... +++..+..++.||+.||+|||++
T Consensus 89 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~~--l~~~~~~~~~~ql~~aL~~LH~~ 137 (353)
T cd07850 89 -----------------------------SLEEFQDVYLVMELMDANLCQVIQMD--LDHERMSYLLYQMLCGIKHLHSA 137 (353)
T ss_pred -----------------------------CccccCcEEEEEeccCCCHHHHHhhc--CCHHHHHHHHHHHHHHHHHHHhC
Confidence 00123467999999999999887654 89999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..++.++||
T Consensus 138 gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv 200 (353)
T cd07850 138 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------MMTPYVVTRYYRAPEVILG-MGYKENVDI 200 (353)
T ss_pred CeeeCCCCHHHEEECCCCCEEEccCccceeCCCCC----------------CCCCCcccccccCHHHHhC-CCCCCchhh
Confidence 99999999999999999999999999997542111 1133468899999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC------------------------------------CCCc----c
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------------------LPPS----W 629 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~------------------------------------~p~~----~ 629 (1170)
|||||++|+|++ ||................+. .+.. .
T Consensus 201 wslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (353)
T cd07850 201 WSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHN 280 (353)
T ss_pred HhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCccccccc
Confidence 999999999996 66543322211111110000 0000 1
Q ss_pred ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 630 ~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
...++.+.++|.+||+.||.+|||+.++|+|+|+...
T Consensus 281 ~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~~ 317 (353)
T cd07850 281 KLKASQARDLLSKMLVIDPEKRISVDDALQHPYINVW 317 (353)
T ss_pred ccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhhc
Confidence 1224467899999999999999999999999987643
|
Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK |
| >cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-35 Score=330.55 Aligned_cols=252 Identities=25% Similarity=0.412 Sum_probs=201.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|+++.+|+.||+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~--~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~-------- 77 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG--DDFSLIQQEIFMVKECKHCNIVAYFGSYLS-------- 77 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc--chHHHHHHHHHHHHhcCCCCeeeeeEEEEe--------
Confidence 4689999999999999999999999999999999875432 234567889999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++ ++|.+++.....+++..+..++.|++.||+|||++
T Consensus 78 --------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 125 (267)
T cd06646 78 --------------------------------REKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSK 125 (267)
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356799999997 58999988878899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
||+||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ...++.++
T Consensus 126 ~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 190 (267)
T cd06646 126 GKMHRDIKGANILLTDNGDVKLADFGVAAKITATI---------------AKRKSFIGTPYWMAPEVAAVEKNGGYNQLC 190 (267)
T ss_pred CccccCCCHHHEEECCCCCEEECcCccceeecccc---------------cccCccccCccccCHhHcccccCCCCcchh
Confidence 99999999999999999999999999998652110 01133568999999998753 23478899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC--CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~--p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|||||||++|||++ ||................... +......++.+.+||++||+.+|.+|||++++++|+|
T Consensus 191 Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~ 267 (267)
T cd06646 191 DIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF 267 (267)
T ss_pred hHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccccccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence 99999999999997 664433322221111111111 1122345678999999999999999999999999976
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated |
| >cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-35 Score=336.78 Aligned_cols=275 Identities=28% Similarity=0.444 Sum_probs=215.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~--------- 71 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQ--------- 71 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeee---------
Confidence 47899999999999999999999899999999997654332 34567889999999999999999998763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.....|++|||+. ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 72 -------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH 120 (316)
T cd05574 72 -------------------------------TETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH 120 (316)
T ss_pred -------------------------------cCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 5999988754 46999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCC--CC------------CCCCCccccCcccccCccCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA--FP------------TDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~--~~------------~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
++|++||||||+||+++.++.++|+|||++............. .. .............+||..|+|
T Consensus 121 ~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~a 200 (316)
T cd05574 121 LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIA 200 (316)
T ss_pred HCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcC
Confidence 9999999999999999999999999999998653221100000 00 000000111234579999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
||++.+ ..++.++||||||+++|+|++ ||...................+. ....++.+.++|.+||+.||.+|||
T Consensus 201 PE~~~~-~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~li~~~l~~~p~~R~s 278 (316)
T cd05574 201 PEVISG-DGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPG-SPPVSSSARDLIRKLLVKDPSKRLG 278 (316)
T ss_pred HHHHcC-CCCCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHhcCCccCCC-ccccCHHHHHHHHHHccCCHhHCCC
Confidence 999987 568999999999999999997 77655554444444432333332 2235778999999999999999999
Q ss_pred ----HHHHHhccCCCCchHHHH
Q 001059 654 ----ATELLQDALPPQMEYELL 671 (1170)
Q Consensus 654 ----a~eiL~~~~~~~~~~~~~ 671 (1170)
++++++|+||.+..+..+
T Consensus 279 ~~~~~~~ll~~~~~~~~~~~~~ 300 (316)
T cd05574 279 SKRGAAEIKQHPFFRGVNWALI 300 (316)
T ss_pred chhhHHHHHcCchhhcCChhhc
Confidence 999999999998776544
|
Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin |
| >cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=333.84 Aligned_cols=260 Identities=28% Similarity=0.440 Sum_probs=203.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||.|+||.||+|.+..+|+.||||+++...........+.+|+.+++.+. ||||+++++++....
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~------ 74 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEE------ 74 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecC------
Confidence 4789999999999999999999999999999998765443334467889999999995 699999998874321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+|++|||++++|.+++... ..+++..++.++.||+.||.|
T Consensus 75 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~ 125 (295)
T cd07837 75 -----------------------------KNGKPSLYLVFEYLDSDLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAH 125 (295)
T ss_pred -----------------------------CCCCceEEEEeeccCcCHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 0123458999999999998887642 357999999999999999999
Q ss_pred HHhCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
||++||+||||||+||+++. ++.+||+|||++..+.... ...+...+++.|+|||++.+...++
T Consensus 126 LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~ 190 (295)
T cd07837 126 CHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPV---------------KSYTHEIVTLWYRAPEVLLGSTHYS 190 (295)
T ss_pred HHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCc---------------cccCCcccccCCCChHHhhCCCCCC
Confidence 99999999999999999998 8899999999987542111 0112336789999999887645689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-----------------CC--------CccccCCHHHHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LP--------PSWVAKFSEQESL 639 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p--------~~~~~~~~e~~~L 639 (1170)
.++||||||+++|+|++ ||....+............. .+ ......++++.+|
T Consensus 191 ~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (295)
T cd07837 191 TPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDL 270 (295)
T ss_pred chHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHH
Confidence 99999999999999997 66554443333222211000 00 0112456788999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCC
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|.+||..||.+||++.++++|+|++
T Consensus 271 i~~~l~~~P~~R~~~~eil~~~~~~ 295 (295)
T cd07837 271 LQKMLRYDPAKRISAKAALTHPYFD 295 (295)
T ss_pred HHHHccCChhhcCCHHHHhcCCCcC
Confidence 9999999999999999999999984
|
Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm |
| >cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-35 Score=335.54 Aligned_cols=250 Identities=22% Similarity=0.293 Sum_probs=192.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----------------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCcee
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~----------------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~ 418 (1170)
++|++.++||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+|++++||||++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~ 83 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPD-ANKNARNDFLKEVKILSRLKDPNIIR 83 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCC-CCHHHHHHHHHHHHHHhhcCCCCeeE
Confidence 578999999999999999998642 3457999998743 23334567899999999999999999
Q ss_pred EEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---------
Q 001059 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 488 (1170)
Q Consensus 419 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 488 (1170)
++++|.+ ...+|++||||+ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (304)
T cd05096 84 LLGVCVD----------------------------------------EDPLCMITEYMENGDLNQFLSSHHLDDKEENGN 123 (304)
T ss_pred EEEEEec----------------------------------------CCceEEEEecCCCCcHHHHHHhccccccccccc
Confidence 9998743 245799999996 58998875431
Q ss_pred ----------CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCC
Q 001059 489 ----------HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDT 558 (1170)
Q Consensus 489 ----------~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~ 558 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 124 ~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~---------- 193 (304)
T cd05096 124 DAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDY---------- 193 (304)
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCce----------
Confidence 367788999999999999999999999999999999999999999999999975432110
Q ss_pred CCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-----CCCchhHHHHHHHH---hhhc--CCCCCc
Q 001059 559 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSD---LKQK--GELPPS 628 (1170)
Q Consensus 559 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~---l~~~--~~~p~~ 628 (1170)
........+++.|||||++.+ ..++.++|||||||++|||++ ||......+..... .... ...+..
T Consensus 194 ---~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (304)
T cd05096 194 ---YRIQGRAVLPIRWMAWECILM-GKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENAGEFFRDQGRQVYLFR 269 (304)
T ss_pred ---eEecCcCCCCccccCHHHHhc-CCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHHHHHhhhccccccccC
Confidence 001123356789999999876 568999999999999999974 66654433322111 1111 111122
Q ss_pred cccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 629 ~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
...+++.+.+||.+||+.||.+|||+.+|.+
T Consensus 270 ~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~ 300 (304)
T cd05096 270 PPPCPQGLYELMLQCWSRDCRERPSFSDIHA 300 (304)
T ss_pred CCCCCHHHHHHHHHHccCCchhCcCHHHHHH
Confidence 2345678999999999999999999999965
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k |
| >cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-35 Score=327.69 Aligned_cols=257 Identities=27% Similarity=0.456 Sum_probs=204.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+|+..+.||+|+||.||+|.+..+|..||+|++.....+ ......+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 76 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDR----- 76 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcC-----
Confidence 4788999999999999999999999999999998754322 23345688999999999999999999887431
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....++++|||++ ++|.+++.....+++...+.++.||+.||+|||
T Consensus 77 ---------------------------------~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH 123 (266)
T cd06651 77 ---------------------------------AEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLH 123 (266)
T ss_pred ---------------------------------CCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1356899999997 589999988778999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++|+||||||+||+++.++.+||+|||++..+...... ........++..|+|||++.+ ..++.++
T Consensus 124 ~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (266)
T cd06651 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS------------GTGIRSVTGTPYWMSPEVISG-EGYGRKA 190 (266)
T ss_pred hCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc------------CCccccCCccccccCHHHhCC-CCCCchh
Confidence 999999999999999999999999999999765321100 001123468899999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|||||||++|||++ ||.............. ....|......++.++++| +||..+|++||+++++++||||+
T Consensus 191 Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~ 265 (266)
T cd06651 191 DVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTNPQLPSHISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ 265 (266)
T ss_pred hhHHHHHHHHHHHHCCCCccccchHHHHHHHhc-CCCCCCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence 99999999999997 7765544333332222 2222222234456788888 67778999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development |
| >cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=325.58 Aligned_cols=251 Identities=26% Similarity=0.449 Sum_probs=204.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.+..+++.+|+|++...... ..+.+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~--------- 71 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD--DFEIIQQEISMLKECRHPNIVAYFGSYLR--------- 71 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh--hHHHHHHHHHHHHhCCCCChhceEEEEEe---------
Confidence 6899999999999999999999989999999999865433 45678999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||+++ +|.+++... ..+++..++.++.|++.||+|||++
T Consensus 72 -------------------------------~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 120 (262)
T cd06613 72 -------------------------------RDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHET 120 (262)
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999975 888888765 6899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~~ks 590 (1170)
||+|+||||+||+++.++.+||+|||++....... .......++..|+|||.+.+. +.++.++
T Consensus 121 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~ 185 (262)
T cd06613 121 GKIHRDIKGANILLTEDGDVKLADFGVSAQLTATI---------------AKRKSFIGTPYWMAPEVAAVERKGGYDGKC 185 (262)
T ss_pred CceecCCChhhEEECCCCCEEECccccchhhhhhh---------------hccccccCCccccCchhhcccccCCcCchh
Confidence 99999999999999999999999999998653211 011234788999999998763 2578899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC--CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~--~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|+|||||++|+|++ ||.................. ........+.++.++|++||+.+|.+|||+.+++.|+|
T Consensus 186 Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~ 262 (262)
T cd06613 186 DIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF 262 (262)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccchhhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence 99999999999997 77655444333322222111 11122334568899999999999999999999999987
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ |
| >cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-35 Score=333.80 Aligned_cols=255 Identities=27% Similarity=0.412 Sum_probs=202.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|+..+.||+|+||+||+|.+..+++.||+|.+...... ......+.+|+.+++.++|+||+++++.+.+
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~--------- 71 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYET--------- 71 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEec---------
Confidence 377889999999999999999999999999998754322 2223457789999999999999999987732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||++ ++|.+.+... ..+++..+..++.|++.||.|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 120 (285)
T cd05630 72 -------------------------------KDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQ 120 (285)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999996 5898887543 358999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+||+++.++.++|+|||++....... ......||+.|+|||++.+ ..++.++|
T Consensus 121 ~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~~D 183 (285)
T cd05630 121 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------TIKGRVGTVGYMAPEVVKN-ERYTFSPD 183 (285)
T ss_pred CCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCc----------------cccCCCCCccccChHHHcC-CCCCCccc
Confidence 999999999999999999999999999987532110 1123479999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHH---HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 001059 592 MYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~---~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 660 (1170)
||||||++|+|++ ||...... ........ .. ........++++.+|+.+||+.||.+||| ++++++|
T Consensus 184 iwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 184 WWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK-EV-QEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhh-hh-hhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 9999999999996 77643221 11111111 10 11122345678999999999999999999 9999999
Q ss_pred cCCCCchHH
Q 001059 661 ALPPQMEYE 669 (1170)
Q Consensus 661 ~~~~~~~~~ 669 (1170)
+||.+..+.
T Consensus 262 ~~~~~~~~~ 270 (285)
T cd05630 262 PLFKQINFK 270 (285)
T ss_pred hhhhccCHH
Confidence 999886554
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as |
| >cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-35 Score=328.79 Aligned_cols=256 Identities=22% Similarity=0.402 Sum_probs=202.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|++.+.||+|+||.||+|.++.+++.||+|++..... ....+.+|+.+++.+ +||||++++++|.....
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (272)
T cd06637 6 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP----- 77 (272)
T ss_pred hhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc---cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC-----
Confidence 467888999999999999999999999999999875432 245688999999998 79999999998854210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
......+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 78 -----------------------------~~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH 128 (272)
T cd06637 78 -----------------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 128 (272)
T ss_pred -----------------------------CCCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 012357899999997 5899988753 35899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----CCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~~~ 586 (1170)
+++|+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+. ..+
T Consensus 129 ~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~g~~~y~aPE~~~~~~~~~~~~ 193 (272)
T cd06637 129 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 193 (272)
T ss_pred HCCCccCCCCHHHEEECCCCCEEEccCCCceeccccc---------------ccCCcccccccccCHhHhccccCcCCCC
Confidence 9999999999999999999999999999987542111 012345789999999998631 347
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+.++|||||||++|||++ ||.............. ...........+.++.+||.+||+.||.+|||+.+++.||||
T Consensus 194 ~~~~Dv~slGv~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~ 272 (272)
T cd06637 194 DFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI 272 (272)
T ss_pred CchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc-CCCCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence 889999999999999997 6654443333322222 111112223456789999999999999999999999999996
|
Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ |
| >cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-35 Score=331.58 Aligned_cols=257 Identities=26% Similarity=0.388 Sum_probs=204.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|+..+.||+|+||+||+|.+..+|+.||+|++....... .....+.+|+.+|+.++|+||+++++++.
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~----------- 70 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYE----------- 70 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEe-----------
Confidence 778899999999999999999999999999987543222 22345788999999999999999988773
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|++|||++ ++|.+++... ..+++..+..++.|++.||.|||++
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~ 121 (285)
T cd05632 71 -----------------------------TKDALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRE 121 (285)
T ss_pred -----------------------------cCCEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999997 5888777543 3699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+||+++.++.+||+|||++....... ......|++.|+|||++.+ ..++.++|+
T Consensus 122 ~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~g~~~~~aPE~~~~-~~~~~~~Di 184 (285)
T cd05632 122 NTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGE----------------SIRGRVGTVGYMAPEVLNN-QRYTLSPDY 184 (285)
T ss_pred CeeecCCCHHHEEECCCCCEEEecCCcceecCCCC----------------cccCCCCCcCccChHHhcC-CCCCcccch
Confidence 99999999999999999999999999987532110 1123479999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~ 663 (1170)
|||||++|+|++ ||....+............. .+......++++.+|+.+||+.||.+||+ +.+++.|+|+
T Consensus 185 ~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~ 264 (285)
T cd05632 185 WGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFF 264 (285)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcChhh
Confidence 999999999996 77654433221111111111 11222345678999999999999999999 8999999999
Q ss_pred CCchHHH
Q 001059 664 PQMEYEL 670 (1170)
Q Consensus 664 ~~~~~~~ 670 (1170)
......-
T Consensus 265 ~~~~~~~ 271 (285)
T cd05632 265 RNMNFKR 271 (285)
T ss_pred hcCCHHH
Confidence 9986553
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with |
| >cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=332.12 Aligned_cols=256 Identities=29% Similarity=0.443 Sum_probs=206.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.+..++..||+|.+... .......+.+|+.++++++||||+++++.+..
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIE--SEEELEDFMVEIDILSECKHPNIVGLYEAYFY--------- 73 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeC--CHHHHHHHHHHHHHHHhCCCCceeEEEEEEec---------
Confidence 5799999999999999999999989999999998753 33345678899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||+++ +|.+++... ..+++..++.++.|++.||.|||++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~ 122 (280)
T cd06611 74 -------------------------------ENKLWILIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSH 122 (280)
T ss_pred -------------------------------CCeEEEEeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999975 888888664 4699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 588 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 588 (1170)
||+||||||+||+++.++.++|+|||++....... .......||+.|+|||++.. ...++.
T Consensus 123 ~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~ 187 (280)
T cd06611 123 KVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL---------------QKRDTFIGTPYWMAPEVVACETFKDNPYDY 187 (280)
T ss_pred CcccCCCChhhEEECCCCCEEEccCccchhhcccc---------------cccceeecchhhcCHHHHhhcccCCCCCCc
Confidence 99999999999999999999999999987542111 01234578999999998753 134678
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|+|++ ||..........................+.++.++|.+||+.+|.+||++.++++|+|+..
T Consensus 188 ~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~ 267 (280)
T cd06611 188 KADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSD 267 (280)
T ss_pred cccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhcc
Confidence 9999999999999997 7765544444333332211111222345678999999999999999999999999999987
Q ss_pred ch
Q 001059 666 ME 667 (1170)
Q Consensus 666 ~~ 667 (1170)
..
T Consensus 268 ~~ 269 (280)
T cd06611 268 QS 269 (280)
T ss_pred cc
Confidence 63
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti |
| >cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=330.86 Aligned_cols=256 Identities=27% Similarity=0.370 Sum_probs=205.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|++.+.||.|+||.||+|.+..++..+|+|.+... .......+.+|+.+++.++||||++++++|..
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~---------- 73 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTK--SEEELEDYMVEIDILASCDHPNIVKLLDAFYY---------- 73 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCC--CHHHHHHHHHHHHHHHHCCCCCeeeEEEEEee----------
Confidence 367889999999999999999999999999998643 23345678899999999999999999988743
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|++|||+++ +|..++.. ...+++..+..++.||+.||+|||+.|
T Consensus 74 ------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~ 123 (282)
T cd06643 74 ------------------------------ENNLWILIEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENK 123 (282)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3467999999975 77776654 456999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCcc
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDEK 589 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~k 589 (1170)
++||||||+|||++.++.+||+|||++....... .......||+.|+|||++.. ...++.+
T Consensus 124 i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~ 188 (282)
T cd06643 124 IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI---------------QRRDSFIGTPYWMAPEVVMCETSKDRPYDYK 188 (282)
T ss_pred eeecCCCcccEEEccCCCEEEccccccccccccc---------------cccccccccccccCHhhccccCCCCCCCCcc
Confidence 9999999999999999999999999987542110 01233568999999999842 2347789
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|||||||++|||++ ||......+...................+.++.+||.+||+.||.+||++.++++|+|+...
T Consensus 189 ~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 268 (282)
T cd06643 189 ADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVN 268 (282)
T ss_pred chhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEecc
Confidence 999999999999996 77665555444444332222222233456789999999999999999999999999998765
Q ss_pred hH
Q 001059 667 EY 668 (1170)
Q Consensus 667 ~~ 668 (1170)
..
T Consensus 269 ~~ 270 (282)
T cd06643 269 SN 270 (282)
T ss_pred CC
Confidence 43
|
Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. |
| >PLN00009 cyclin-dependent kinase A; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=333.12 Aligned_cols=258 Identities=28% Similarity=0.464 Sum_probs=204.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++.+.||+|++|+||+|.++.+|+.||+|.+............+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (294)
T PLN00009 1 MDQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHS-------- 72 (294)
T ss_pred CCceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEec--------
Confidence 368999999999999999999999999999999987554433344678899999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..+.|+||||++++|.+.+..... +++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~ 120 (294)
T PLN00009 73 --------------------------------EKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHS 120 (294)
T ss_pred --------------------------------CCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999999999888765443 5788899999999999999999
Q ss_pred CCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 512 QGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+|++||||||+||+++. ++.+||+|||++....... ...+...+++.|+|||++.+...++.++
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 185 (294)
T PLN00009 121 HRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV---------------RTFTHEVVTLWYRAPEILLGSRHYSTPV 185 (294)
T ss_pred CCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc---------------cccccCceeecccCHHHHhCCCCCCcHH
Confidence 99999999999999985 4579999999997542110 0112346789999999987645578999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC---------------------CC-----ccccCCHHHHHHHH
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---------------------PP-----SWVAKFSEQESLLR 641 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~---------------------p~-----~~~~~~~e~~~LI~ 641 (1170)
|||||||++|+|++ ||................+.. ++ .....++++.+++.
T Consensus 186 Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 265 (294)
T PLN00009 186 DIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLS 265 (294)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHH
Confidence 99999999999997 665444433333222111000 00 11234668899999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCc
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+||+.+|.+||++.++++|+||...
T Consensus 266 ~~l~~~P~~Rps~~~~l~~~~~~~~ 290 (294)
T PLN00009 266 KMLRLDPSKRITARAALEHEYFKDL 290 (294)
T ss_pred HHccCChhhCcCHHHHhcCchHhHH
Confidence 9999999999999999999998765
|
|
| >cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-35 Score=332.23 Aligned_cols=257 Identities=27% Similarity=0.398 Sum_probs=205.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+++++||.|+||.||+|++..+++.||+|++... .......+.+|+.+++.++||||+++++++..
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 80 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK--SEEELEDYMVEIEILATCNHPYIVKLLGAFYW--------- 80 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEe---------
Confidence 5689999999999999999999999999999998643 33456678899999999999999999988733
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||+++ +|..++.+ ...+++..++.++.||+.||+|||++
T Consensus 81 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 129 (292)
T cd06644 81 -------------------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSM 129 (292)
T ss_pred -------------------------------CCeEEEEEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 3467999999975 67766654 45689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 588 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 588 (1170)
|++||||||+||+++.++.+||+|||++....... .......+++.|+|||++.+ ...++.
T Consensus 130 ~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 194 (292)
T cd06644 130 KIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL---------------QRRDSFIGTPYWMAPEVVMCETMKDTPYDY 194 (292)
T ss_pred CeeecCCCcceEEEcCCCCEEEccCccceeccccc---------------cccceecCCccccCceeeccccccCCCCCc
Confidence 99999999999999999999999999987532110 11234568899999999853 234688
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|||++ ||..........................+.++.++|++||+.||++||+++++++|+|+..
T Consensus 195 ~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~ 274 (292)
T cd06644 195 KADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSS 274 (292)
T ss_pred hhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCccCCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccc
Confidence 9999999999999997 6665544444333322222111223345678999999999999999999999999999876
Q ss_pred chH
Q 001059 666 MEY 668 (1170)
Q Consensus 666 ~~~ 668 (1170)
...
T Consensus 275 ~~~ 277 (292)
T cd06644 275 VTS 277 (292)
T ss_pred ccc
Confidence 643
|
Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. |
| >cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=333.21 Aligned_cols=254 Identities=27% Similarity=0.445 Sum_probs=201.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||+|.++.+|+.||+|.+..........+.+.+|+.+++.++||||++++++|.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFR---------- 70 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcc----------
Confidence 4789999999999999999999989999999998655444344567889999999999999999988762
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|++|||+++ .|..+......+++..++.++.||+.||+|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (286)
T cd07846 71 ------------------------------RKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHN 120 (286)
T ss_pred ------------------------------cCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 24578999999986 55555555567999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.++|+|||++..+.... ...+...++..|+|||++.+...++.++|||
T Consensus 121 i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 185 (286)
T cd07846 121 IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG---------------EVYTDYVATRWYRAPELLVGDTKYGRAVDIW 185 (286)
T ss_pred ccccCCCHHHEEECCCCcEEEEeeeeeeeccCCc---------------cccCcccceeeccCcHHhccccccCchHhHH
Confidence 9999999999999999999999999987643211 0123356889999999987655678899999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCC---------CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELP---------PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p---------~~~~~~~~e~~~LI~~ 642 (1170)
||||++|||++ ||......+.......... ..+ ..+...+..+.+|+.+
T Consensus 186 slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (286)
T cd07846 186 AVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQ 265 (286)
T ss_pred HHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccchHhhccccccccCcchHHHhCCCcCHHHHHHHHH
Confidence 99999999997 5543332221111110000 000 0123456688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCC
Q 001059 643 LMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||+.+|.+||++.++++|+||
T Consensus 266 ~l~~~P~~Rp~~~~il~~~~~ 286 (286)
T cd07846 266 CLRIDPDDRPSSSQLLHHEFF 286 (286)
T ss_pred HhcCCcccchhHHHHhcCCCC
Confidence 999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI |
| >cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=322.37 Aligned_cols=250 Identities=33% Similarity=0.532 Sum_probs=209.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|+.++.||.|+||.||.+++..+|+.+++|.+.....+......+.+|+.++++++||||++++++|.+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~---------- 70 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMD---------- 70 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEec----------
Confidence 4889999999999999999999999999999998766555666788999999999999999999998843
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++++||||+ ++|.+++... ..+++..+..++.|++.||+|||++
T Consensus 71 ------------------------------~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08221 71 ------------------------------DNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKA 120 (256)
T ss_pred ------------------------------CCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999997 5999988764 4589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||++........ ......|++.|+|||.+.+ ..++.++||
T Consensus 121 ~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~---------------~~~~~~~~~~y~ape~~~~-~~~~~~~Dv 184 (256)
T cd08221 121 GILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS---------------MAETVVGTPYYMSPELCQG-VKYNFKSDI 184 (256)
T ss_pred CccccCCChHhEEEeCCCCEEECcCcceEEcccccc---------------cccccCCCccccCHhhcCC-CCCCCcchh
Confidence 999999999999999999999999999976432110 1234578999999999887 457899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||||+++|||++ ||......+....+.. +..++.....+.++.++|.+||..+|.+||++.++++|+|+
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l 256 (256)
T cd08221 185 WALGCVLYELLTLKRTFDATNPLNLVVKIVQ--GNYTPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQPLL 256 (256)
T ss_pred HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHc--CCCCCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence 999999999997 6665554444444332 33333335567789999999999999999999999999875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa |
| >cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-35 Score=331.00 Aligned_cols=254 Identities=25% Similarity=0.419 Sum_probs=198.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++.+.||.|+||.||+|.++.+|+.||||.+...... .....+.+|+.+++.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 73 (291)
T cd07844 4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEE-GAPFTAIREASLLKDLKHANIVTLHDIIH--------- 73 (291)
T ss_pred ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEeccccc-CCchhHHHHHHHHhhCCCcceeeEEEEEe---------
Confidence 47899999999999999999999989999999998754322 22345678999999999999999998873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+.|+||||++++|.+++... ..+++..++.++.||+.||.|||++
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~ 122 (291)
T cd07844 74 -------------------------------TKKTLTLVFEYLDTDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQR 122 (291)
T ss_pred -------------------------------cCCeEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 24578999999999999988754 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... .......+++.|+|||++.+...++.++||
T Consensus 123 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv 187 (291)
T cd07844 123 RVLHRDLKPQNLLISERGELKLADFGLARAKSVPS---------------KTYSNEVVTLWYRPPDVLLGSTEYSTSLDM 187 (291)
T ss_pred CeecccCCHHHEEEcCCCCEEECccccccccCCCC---------------ccccccccccccCCcHHhhcCcccCcHHHH
Confidence 99999999999999999999999999987532111 011223578899999998764568899999
Q ss_pred HHHHHHHHHhhc---CCCchh-HHHHHHHHhhhcCC----------------------C-CC----ccccCC--HHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKGE----------------------L-PP----SWVAKF--SEQESL 639 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~~~~----------------------~-p~----~~~~~~--~e~~~L 639 (1170)
||+||++|+|++ ||.... ..+........... . +. ...... +++.++
T Consensus 188 ~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 267 (291)
T cd07844 188 WGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEEL 267 (291)
T ss_pred HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccccccccccccCChhHHHhCcCCCCchhHHHH
Confidence 999999999996 664333 11111111100000 0 00 001122 677899
Q ss_pred HHHccCCCCCCCCCHHHHHhccCC
Q 001059 640 LRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|.+||+.+|.+|||+.++++|+||
T Consensus 268 i~~~L~~~p~~Rps~~e~l~~~~f 291 (291)
T cd07844 268 ALKFLQYEPKKRISAAEAMKHPYF 291 (291)
T ss_pred HHHHhccCcccccCHHHHhcCCCC
Confidence 999999999999999999999997
|
Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the |
| >cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=323.34 Aligned_cols=250 Identities=31% Similarity=0.593 Sum_probs=207.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|+||.||++.+..+|+.||+|.+............+.+|+.+++.++||||+++++++.
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~----------- 69 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFE----------- 69 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeec-----------
Confidence 588999999999999999999999999999999765444445568899999999999999999998762
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.....|++|||++ ++|.+.+.... .+++.+++.++.|++.||.|||++
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (256)
T cd08218 70 -----------------------------ENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDR 120 (256)
T ss_pred -----------------------------CCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 2457899999996 58998887543 588999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++|+||+|+|||++.++.++|+|||++....... .......|++.|+|||++.+ ..++.++|+
T Consensus 121 ~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~pe~~~~-~~~~~~~Dv 184 (256)
T cd08218 121 KILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV---------------ELARTCIGTPYYLSPEICEN-RPYNNKSDI 184 (256)
T ss_pred CEecCCCCHHHEEEcCCCCEEEeeccceeecCcch---------------hhhhhccCCccccCHHHhCC-CCCCCccch
Confidence 99999999999999999999999999997643211 00122458899999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||++|+|++ ||......+.....+. +..++.....++++.++|.+||+.+|.+||++.++++|+||
T Consensus 185 ~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~ 256 (256)
T cd08218 185 WALGCVLYEMCTLKHAFEAGNMKNLVLKIIR--GSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEKNFI 256 (256)
T ss_pred hHHHHHHHHHHcCCCCccCCCHHHHHHHHhc--CCCCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence 999999999997 6665555544444432 33343444567789999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti |
| >cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=330.92 Aligned_cols=252 Identities=28% Similarity=0.468 Sum_probs=202.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++.+.||.|++|.||+|.++.+|..||+|++............+.+|+.+++.++||||+++++++.
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~------------ 68 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVH------------ 68 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheec------------
Confidence 67789999999999999999999999999999765444344467889999999999999999998773
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
.....|++|||++++|.+++.... .+++..++.++.||+.||+|||++++
T Consensus 69 ----------------------------~~~~~~iv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~ 120 (283)
T cd07835 69 ----------------------------SENKLYLVFEFLDLDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRV 120 (283)
T ss_pred ----------------------------cCCeEEEEEeccCcCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 235789999999989999887665 69999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||+|+||+++.++.++|+|||++....... .......+++.|+|||++.+...++.++||||
T Consensus 121 ~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s 185 (283)
T cd07835 121 LHRDLKPQNLLIDREGALKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWS 185 (283)
T ss_pred eCCCCCHHHEEEcCCCcEEEeecccccccCCCc---------------cccCccccccCCCCCceeecCcccCcHHHHHH
Confidence 999999999999999999999999997542111 01123357899999998876445789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcC--------------------------CCCCccccCCHHHHHHHHHccC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKG--------------------------ELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~--------------------------~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
|||++|+|++ ||................. .........++.+.++|.+||+
T Consensus 186 lG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 265 (283)
T cd07835 186 IGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLV 265 (283)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhc
Confidence 9999999997 6654433322222111100 0001123445688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 001059 646 PSPSDRPSATELLQDALP 663 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~~~~ 663 (1170)
.||.+|||+.++++|+||
T Consensus 266 ~~P~~Rpt~~~il~~~~~ 283 (283)
T cd07835 266 YDPAKRISAKAALQHPYF 283 (283)
T ss_pred CChhhCcCHHHHhcCCCC
Confidence 999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc |
| >cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=325.39 Aligned_cols=255 Identities=31% Similarity=0.519 Sum_probs=205.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-------hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-------PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-------~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
|.+...||.|+||.||+|.+..+++.||+|.+....... .....+.+|+.+++.++||||+++++++.+
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 77 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLD---- 77 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEe----
Confidence 567789999999999999999899999999986543321 123568899999999999999999988733
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
..+.+++|||+++ +|.+++.....+++..+..++.|++.||+|
T Consensus 78 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~ 121 (267)
T cd06628 78 ------------------------------------ADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNY 121 (267)
T ss_pred ------------------------------------CCccEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHH
Confidence 3567899999975 899999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++||||||+||+++.++.+||+|||+++.+....... ..........|++.|+|||.+.+ ..++.
T Consensus 122 lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~---------~~~~~~~~~~~~~~y~~pe~~~~-~~~~~ 191 (267)
T cd06628 122 LHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLST---------KTNGARPSLQGSVFWMAPEVVKQ-TSYTR 191 (267)
T ss_pred HHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccC---------CccccccccCCCcCccChhHhcc-CCCCc
Confidence 999999999999999999999999999999998664211000 00011223468899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
++|+|||||++|+|++ ||.............. ...+......+..+.++|++||+.||.+||++.++++|+||
T Consensus 192 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 267 (267)
T cd06628 192 KADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGE--NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267 (267)
T ss_pred hhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhc--cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence 9999999999999997 7765544333332221 22333334566789999999999999999999999999986
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate |
| >cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=333.42 Aligned_cols=257 Identities=26% Similarity=0.394 Sum_probs=203.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|++.+.||.|+||.||+|.+..+|+.||||.++..... ......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------- 73 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGH------- 73 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeec-------
Confidence 478899999999999999999989999999999765433 2344567789999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+||||++++|.+++.... .+++..++.++.||++||+|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~ 120 (298)
T cd07841 74 ---------------------------------KSNINLVFEFMETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHS 120 (298)
T ss_pred ---------------------------------CCEEEEEEcccCCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 45789999999889999998766 79999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+|+||||+|||++.++.+||+|||+++...... .......+++.|+|||.+.+...++.++|
T Consensus 121 ~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 185 (298)
T cd07841 121 NWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPN---------------RKMTHQVVTRWYRAPELLFGARHYGVGVD 185 (298)
T ss_pred CCeeecCCChhhEEEcCCCCEEEccceeeeeccCCC---------------ccccccccceeeeCHHHHhCCCCCCcHHH
Confidence 999999999999999999999999999998653211 01123357889999999876456789999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC--------------------CC-----CccccCCHHHHHHHHHc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE--------------------LP-----PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~--------------------~p-----~~~~~~~~e~~~LI~~~ 643 (1170)
||||||++|||++ ||....+............. .+ ..+...+.++.++|.+|
T Consensus 186 v~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 265 (298)
T cd07841 186 MWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRL 265 (298)
T ss_pred HHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhcccccccccccccCCcchhhhcccccHHHHHHHHHH
Confidence 9999999999997 34333322221111110000 00 01123456788999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 001059 644 MSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|+.||++|||+.++++|+||.+..
T Consensus 266 l~~~P~~R~s~~e~l~~~~~~~~~ 289 (298)
T cd07841 266 LTLNPNKRITARQALEHPYFSNDP 289 (298)
T ss_pred hcCCcccCcCHHHHhhCccccCCC
Confidence 999999999999999999998864
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is |
| >cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-35 Score=325.17 Aligned_cols=249 Identities=27% Similarity=0.470 Sum_probs=203.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.+..+++.||+|.++.... .+.+.+|+.+++.++||||+++++++.+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------- 69 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED----LQEIIKEISILKQCDSPYIVKYYGSYFK--------- 69 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH----HHHHHHHHHHHHhCCCCcEeeeeeeeec---------
Confidence 689999999999999999999998899999999864322 5689999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+++||+++ +|.+++.. ...+++..++.++.|++.||.|||+.
T Consensus 70 -------------------------------~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~ 118 (256)
T cd06612 70 -------------------------------NTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSN 118 (256)
T ss_pred -------------------------------CCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999974 89998865 45689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
+++||||+|+||+++.++.+||+|||++........ ......|+..|+|||++.+ ..++.++||
T Consensus 119 ~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~---------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di 182 (256)
T cd06612 119 KKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA---------------KRNTVIGTPFWMAPEVIQE-IGYNNKADI 182 (256)
T ss_pred CcccCCCCcceEEECCCCcEEEcccccchhcccCcc---------------ccccccCCccccCHHHHhc-CCCCchhhH
Confidence 999999999999999999999999999986532110 1123458899999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||++|+|++ ||..........................+.++.++|.+||+.||.+|||+.++++|+|+
T Consensus 183 ~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~~~~~ 256 (256)
T cd06612 183 WSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQHPFI 256 (256)
T ss_pred HHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCCCCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence 999999999997 66554443333222211111111222345689999999999999999999999999996
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a |
| >KOG0584 consensus Serine/threonine protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=350.46 Aligned_cols=256 Identities=29% Similarity=0.517 Sum_probs=214.1
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CChhhHHHHHHHHHHHHhccCCCceeEEEEEeec
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
+.+||+ +...+||+|+|-+||+|.+..+|..||.-.++..+ .+....++|..|+.+|+.|+|||||++|.+|.+.
T Consensus 37 p~gRy~---k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~ 113 (632)
T KOG0584|consen 37 PTGRYL---KFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDT 113 (632)
T ss_pred CCCcee---ehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecC
Confidence 345553 34567999999999999999999999987766554 4455568999999999999999999999999653
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
....+.+|+|++. |+|..++.+.+.++...++.|++||++|
T Consensus 114 --------------------------------------~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkG 155 (632)
T KOG0584|consen 114 --------------------------------------DNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKG 155 (632)
T ss_pred --------------------------------------CCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHH
Confidence 2467889999995 8999999999999999999999999999
Q ss_pred HHHHHhCC--ccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQG--IIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~g--IiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|.|||++. |||||||-+||||+++ |.|||+|+|+|+...... ..+.+|||.|||||.+..
T Consensus 156 L~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~-----------------aksvIGTPEFMAPEmYEE 218 (632)
T KOG0584|consen 156 LVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH-----------------AKSVIGTPEFMAPEMYEE 218 (632)
T ss_pred hhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccc-----------------cceeccCccccChHHHhh
Confidence 99999985 9999999999999876 899999999999864322 245799999999999985
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
.|+..+||||||++++||+| ||..-.......+.+. .|..|..+.. ..|++++||.+||.. .+.|||+.++|
T Consensus 219 --~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~-SGiKP~sl~kV~dPevr~fIekCl~~-~~~R~sa~eLL 294 (632)
T KOG0584|consen 219 --NYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVT-SGIKPAALSKVKDPEVREFIEKCLAT-KSERLSAKELL 294 (632)
T ss_pred --hcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHH-cCCCHHHhhccCCHHHHHHHHHHhcC-chhccCHHHHh
Confidence 69999999999999999998 7776544433333333 4445544433 357999999999999 99999999999
Q ss_pred hccCCCCc
Q 001059 659 QDALPPQM 666 (1170)
Q Consensus 659 ~~~~~~~~ 666 (1170)
+|+||...
T Consensus 295 ~d~Ff~~d 302 (632)
T KOG0584|consen 295 KDPFFDED 302 (632)
T ss_pred hChhhccc
Confidence 99998875
|
|
| >cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-35 Score=332.57 Aligned_cols=275 Identities=27% Similarity=0.379 Sum_probs=208.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++|++.+.||.|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||+++++.+.+...
T Consensus 6 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~---- 81 (311)
T cd07866 6 KLRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPD---- 81 (311)
T ss_pred ccccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccc----
Confidence 3689999999999999999999999999999999987654433334467889999999999999999987754310
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
........+|++|+|+++++...+.. ...+++..++.++.||++||+|||+
T Consensus 82 ----------------------------~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~ 133 (311)
T cd07866 82 ----------------------------KSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYMLQLLEGINYLHE 133 (311)
T ss_pred ----------------------------cccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 00123457899999999988887765 3469999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||++............ .........+...|++.|+|||++.+...++.++|
T Consensus 134 ~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 209 (311)
T cd07866 134 NHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKG----GGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVD 209 (311)
T ss_pred CCeecCCCCHHHEEECCCCCEEECcCccchhccCCCccccc----CCcccccccccceeccCcCChHHhhCCCccCchhH
Confidence 99999999999999999999999999999865432211000 00001112345578999999998876556899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-----------------------CCC----ccccCCHHHHHHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------------LPP----SWVAKFSEQESLLR 641 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-----------------------~p~----~~~~~~~e~~~LI~ 641 (1170)
||||||++|||++ ||................+. .++ .+....+.+.++|.
T Consensus 210 v~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 289 (311)
T cd07866 210 IWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLS 289 (311)
T ss_pred hHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHH
Confidence 9999999999997 55544433322221111110 000 11233457889999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 001059 642 RLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+||+.||.+|||+.+++.|+||
T Consensus 290 ~~l~~~p~~R~t~~ell~~~~f 311 (311)
T cd07866 290 KLLSLDPYKRLTASDALEHPYF 311 (311)
T ss_pred HHcccCcccCcCHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic |
| >cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-35 Score=327.27 Aligned_cols=247 Identities=18% Similarity=0.248 Sum_probs=197.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||+|+||.||+|.++ ..+..||+|.++.. .+......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------ 77 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAG-CSDKQRRGFLAEALTLGQFDHSNIVRLEGVITR------ 77 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCC-CCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEec------
Confidence 57999999999999999999875 34678999998753 333445678999999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+||||+++ +|.+++... ..+++..++.++.||+.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~l 123 (266)
T cd05064 78 ----------------------------------GNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYL 123 (266)
T ss_pred ----------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 3467999999974 888888764 4689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+|||++.++.+|++|||.+....... ........+++.|+|||.+.+ ..++.+
T Consensus 124 H~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (266)
T cd05064 124 SEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEA--------------IYTTMSGKSPVLWAAPEAIQY-HHFSSA 188 (266)
T ss_pred HHCCEeeccccHhhEEEcCCCcEEECCCcccccccccc--------------hhcccCCCCceeecCHHHHhh-CCccch
Confidence 99999999999999999999999999999876431110 001112346778999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+|||||||++||+++ ||......+.... +. .+..++.....+..+.+++.+||+.+|.+||++.+|++
T Consensus 189 ~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~ 260 (266)
T cd05064 189 SDVWSFGIVMWEVMSYGERPYWDMSGQDVIKA-VE-DGFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHS 260 (266)
T ss_pred hHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHH-HH-CCCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence 999999999999774 7765544433322 22 22233344556778999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor |
| >cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-35 Score=331.84 Aligned_cols=253 Identities=23% Similarity=0.402 Sum_probs=206.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||.|+||.||+|.+..+|+.||+|.+..... .....+.+|+.+++.++||||+++++.+..
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~--------- 87 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQ--PKKELIINEILVMKELKNPNIVNFLDSFLV--------- 87 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccC--chHHHHHHHHHHHHhcCCCceeeeeeeEec---------
Confidence 579999999999999999999999999999999875433 235678899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|++|||+++ +|..++.. ..+++.++..++.|++.||+|||++|
T Consensus 88 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~~ 135 (296)
T cd06655 88 -------------------------------GDELFVVMEYLAGGSLTDVVTE-TCMDEAQIAAVCRECLQALEFLHANQ 135 (296)
T ss_pred -------------------------------CceEEEEEEecCCCcHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3578999999975 78877754 46899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|||
T Consensus 136 i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 199 (296)
T cd06655 136 VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 199 (296)
T ss_pred cccCCCCHHHEEECCCCCEEEccCccchhccccc---------------ccCCCcCCCccccCcchhcC-CCCCchhhHH
Confidence 9999999999999999999999999988643211 01123468999999999887 5688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|+|++ ||..........................++.+.++|++||..||.+||++.++++|+|+...
T Consensus 200 slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~ 275 (296)
T cd06655 200 SLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLA 275 (296)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhChHhhhc
Confidence 99999999997 77665544433332221211222334567789999999999999999999999999998754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-35 Score=347.03 Aligned_cols=251 Identities=24% Similarity=0.304 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~-----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|++ ..++..||||+++.... ....+.+.+|+.+|+.+ +||||++++++|.+
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~-~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~-- 110 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH-LTEREALMSELKVLSYLGNHINIVNLLGACTV-- 110 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC-cHHHHHHHHHHHHHHHhcCCcceeeeeeeecc--
Confidence 35799999999999999999975 34567899999864332 23456788999999999 89999999998733
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 488 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 488 (1170)
....|+|||||+ |+|.+++....
T Consensus 111 --------------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 152 (375)
T cd05104 111 --------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYK 152 (375)
T ss_pred --------------------------------------CCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHH
Confidence 345689999996 58888875421
Q ss_pred ---------------------------------------------------------CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 489 ---------------------------------------------------------HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 489 ---------------------------------------------------------~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.+++..++.++.||+.||+|||+
T Consensus 153 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~ 232 (375)
T cd05104 153 NLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLAS 232 (375)
T ss_pred hhhhhhcccchhhhhhhhcCCCcccccccccccccccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 36788899999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++.++|
T Consensus 233 ~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~sD 298 (375)
T cd05104 233 KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN-------------YVVKGNARLPVKWMAPESIFN-CVYTFESD 298 (375)
T ss_pred CCeeccCCchhhEEEECCCcEEEecCccceeccCccc-------------ccccCCCCCCcceeChhHhcC-CCCCCCCC
Confidence 9999999999999999999999999999986432110 000112345678999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||++|||++ ||............+. .+..+......++++.+||.+||+.||++|||+.++++.
T Consensus 299 i~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~ 370 (375)
T cd05104 299 VWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIK-EGYRMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQL 370 (375)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHH-hCccCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999985 6655433333333333 222222223346789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce |
| >cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=322.13 Aligned_cols=252 Identities=35% Similarity=0.619 Sum_probs=207.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|.+..+|+.||+|.++.........+++.+|+.+++.++||||+++++.+...
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDR--------- 71 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecC---------
Confidence 58899999999999999999999999999999987666656667889999999999999999999876432
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||
T Consensus 72 -----------------------------~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH 122 (265)
T cd08217 72 -----------------------------SNQTLYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECH 122 (265)
T ss_pred -----------------------------CCCEEEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHh
Confidence 2356799999997 589888865 356899999999999999999999
Q ss_pred -----hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 511 -----GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 511 -----s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
+.+++|+||||+||+++.++.+||+|||++....... .......|++.|+|||++.+ ..
T Consensus 123 ~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~---------------~~~~~~~~~~~~~~pE~~~~-~~ 186 (265)
T cd08217 123 NRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDS---------------SFAKTYVGTPYYMSPEQLNH-MS 186 (265)
T ss_pred cCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCc---------------ccccccccCCCccChhhhcC-CC
Confidence 9999999999999999999999999999998653211 00123468999999999987 55
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
++.++|+||||+++|+|++ ||........... +. .+..+......++.+.+++.+||+.+|++||++.+|++|||
T Consensus 187 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~ 264 (265)
T cd08217 187 YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASK-IK-EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPL 264 (265)
T ss_pred CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHH-Hh-cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhCCC
Confidence 8899999999999999997 7765543332222 22 33333333456678999999999999999999999999998
Q ss_pred C
Q 001059 663 P 663 (1170)
Q Consensus 663 ~ 663 (1170)
.
T Consensus 265 ~ 265 (265)
T cd08217 265 I 265 (265)
T ss_pred C
Confidence 4
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi |
| >cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-35 Score=339.10 Aligned_cols=265 Identities=25% Similarity=0.371 Sum_probs=204.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+..+|+.||||+++.... ......+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------ 76 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH-QTFCQRTLREIKILRRFKHENIIGILDIIRPPS------ 76 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc-chhHHHHHHHHHHHHhCCCCCcCchhheeeccc------
Confidence 4689999999999999999999999999999999864322 234567889999999999999999998763321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......+|++|||++++|.+.+.. ..+++..++.++.||+.||+|||++|
T Consensus 77 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~ql~~aL~~LH~~~ 126 (336)
T cd07849 77 -----------------------------FESFNDVYIVQELMETDLYKLIKT-QHLSNDHIQYFLYQILRGLKYIHSAN 126 (336)
T ss_pred -----------------------------ccccceEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 012346799999999998887754 56999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||++......... ........||+.|+|||++.+...++.++|||
T Consensus 127 ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 194 (336)
T cd07849 127 VLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDH------------TGFLTEYVATRWYRAPEIMLNSKGYTKAIDIW 194 (336)
T ss_pred eeccCCCHHHEEECCCCCEEECcccceeeccccccc------------cCCcCCcCcCCCccChHHhhCCCCCCcHHHHH
Confidence 999999999999999999999999999864321100 00113357899999999876545689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhh----------------------h----cCCCC--CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLK----------------------Q----KGELP--PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~----------------------~----~~~~p--~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||.............. . ....+ ......++++.++|.+
T Consensus 195 slGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 274 (336)
T cd07849 195 SVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDK 274 (336)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHH
Confidence 99999999997 6643322111110000 0 00000 0112346688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.++++|+|+.+..
T Consensus 275 ~l~~dP~~Rpt~~e~l~hp~~~~~~ 299 (336)
T cd07849 275 MLTFNPHKRITVEEALAHPYLEQYH 299 (336)
T ss_pred HcCCChhhCcCHHHHhcCccccccC
Confidence 9999999999999999999998663
|
Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase |
| >KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-36 Score=322.34 Aligned_cols=265 Identities=23% Similarity=0.403 Sum_probs=206.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
..+..|+.+..||+|.||.||+|..+.++ +.||||+++-............||+.+++.++||||+.+..+|+++
T Consensus 21 e~l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~- 99 (438)
T KOG0666|consen 21 EDLFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSH- 99 (438)
T ss_pred HHHHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhcc-
Confidence 35678999999999999999999765443 3799999976544445567789999999999999999998777432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-----CCCCHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQI 502 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qI 502 (1170)
...+++++||.+.+|+++++-. ..++...++.++.||
T Consensus 100 --------------------------------------d~~v~l~fdYAEhDL~~II~fHr~~~~~~lp~~mvKsilwQi 141 (438)
T KOG0666|consen 100 --------------------------------------DKKVWLLFDYAEHDLWHIIKFHRASKAKQLPRSMVKSILWQI 141 (438)
T ss_pred --------------------------------------CceEEEEehhhhhhHHHHHHHhccchhccCCHHHHHHHHHHH
Confidence 4678999999999999988532 358999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCC----CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
+.|+.|||++-|+||||||.|||+..+ |.|||+|||+|+.+..+-.. .......+-|.+|.|||
T Consensus 142 l~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkp------------l~s~d~VVVTiWYRAPE 209 (438)
T KOG0666|consen 142 LDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKP------------LASLDPVVVTIWYRAPE 209 (438)
T ss_pred HhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccc------------cccCCceEEEEEecChH
Confidence 999999999999999999999999888 89999999999987644211 11223457899999999
Q ss_pred cccCCCCCCccchhHHHHHHHHHhhc--CCCchhHH----------HHHHHHhhhcCC-----------CCC--------
Q 001059 579 IEQGWPKIDEKADMYSLGIVFFELWH--PFSTAMER----------QIVLSDLKQKGE-----------LPP-------- 627 (1170)
Q Consensus 579 ~l~~~~~~~~ksDIwSlGviL~ELlt--Pf~~~~~~----------~~~~~~l~~~~~-----------~p~-------- 627 (1170)
.+.|...|+++.||||+|||+.||++ |.....+. ..+.++..--+. +|.
T Consensus 210 LLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f 289 (438)
T KOG0666|consen 210 LLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDF 289 (438)
T ss_pred HhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHh
Confidence 99998889999999999999999986 43211110 001111100000 000
Q ss_pred ---------------ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 628 ---------------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 628 ---------------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+...++.+.+|+.+||+.||.+|.|++++|+|++|..++
T Consensus 290 ~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~ 344 (438)
T KOG0666|consen 290 RRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDP 344 (438)
T ss_pred HHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccCchhhccHHHHhcccccccCC
Confidence 0111334577999999999999999999999999988764
|
|
| >cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=330.93 Aligned_cols=253 Identities=22% Similarity=0.387 Sum_probs=205.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||.|+||.||+|.+..+++.||+|.+...... ..+.+.+|+.+++.+.||||+++++.|..
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~e~~~l~~~~h~~v~~~~~~~~~--------- 88 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV--------- 88 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc--hHHHHHHHHHHHHhCCCCCEeeEEEEEEe---------
Confidence 6899999999999999999999999999999998754432 34678899999999999999999988743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|+||||++ ++|.+++.. ..+++.++..++.|++.||+|||++|
T Consensus 89 -------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~i~~ql~~aL~~LH~~g 136 (296)
T cd06654 89 -------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136 (296)
T ss_pred -------------------------------CCEEEEeecccCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356899999997 589888754 46899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|||
T Consensus 137 i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 200 (296)
T cd06654 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 200 (296)
T ss_pred cccCCCCHHHEEEcCCCCEEECccccchhccccc---------------cccCcccCCccccCHHHHcC-CCCCccchHH
Confidence 9999999999999999999999999988643211 01123468999999999887 5678999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|+|++ ||....................+.....++.+.++|.+||..||.+|||+.++++|+|+...
T Consensus 201 s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~ 276 (296)
T cd06654 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA 276 (296)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCCCCCCCccccCHHHHHHHHHHCcCCcccCcCHHHHhhChhhhcc
Confidence 99999999997 77655443333222221111112233456789999999999999999999999999998653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-35 Score=329.82 Aligned_cols=250 Identities=20% Similarity=0.307 Sum_probs=201.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-----cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
+++|++.+.||+|+||.||+|.+...+ ..||+|.++.. ........+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~--- 79 (283)
T cd05048 4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKEN-AEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK--- 79 (283)
T ss_pred hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccC-CCHHHHHHHHHHHHHHHhcCCcccceEEEEEcC---
Confidence 468999999999999999999987555 68999998643 333445678999999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCCC
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 491 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 491 (1170)
....|++|||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 122 (283)
T cd05048 80 -------------------------------------EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLD 122 (283)
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCC
Confidence 345789999996 5999988654 4578
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+..++.++.||+.||+|||++|++||||||+||+++.++.+||+|||+++....... ........++
T Consensus 123 ~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~-------------~~~~~~~~~~ 189 (283)
T cd05048 123 CSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADY-------------YRVQSKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeecccccc-------------ccccCCCccc
Confidence 889999999999999999999999999999999999999999999999975422110 0112334678
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
+.|+|||.+.+ ..++.++|||||||++|||++ ||......+.... +. ....++.....++++.+|+++||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~~~~l~~~c~~~~ 266 (283)
T cd05048 190 VRWMPPEAILY-GKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM-IR-SRQLLPCPEDCPARVYALMIECWNEI 266 (283)
T ss_pred ccccCHHHhcc-CcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCcCCCcccCCHHHHHHHHHHccCC
Confidence 89999999876 568999999999999999986 7766555443332 22 33344444567789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05048 267 PARRPRFKDIHTR 279 (283)
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999975
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer |
| >cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=328.15 Aligned_cols=253 Identities=25% Similarity=0.384 Sum_probs=198.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|.+.+.||+|+||.||+|.+..+|+.||+|.+...... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~--------- 74 (291)
T cd07870 5 TSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEE-GVPFTAIREASLLKGLKHANIVLLHDIIHT--------- 74 (291)
T ss_pred ceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcC-CCcHHHHHHHHHHHhcCCCCEeEEEEEEec---------
Confidence 6899999999999999999999999999999998754322 223457789999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|++|||++++|.+.+.. ...+++..+..++.||+.||+|||++|
T Consensus 75 -------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ 123 (291)
T cd07870 75 -------------------------------KETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQH 123 (291)
T ss_pred -------------------------------CCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 356899999999888877654 346888899999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||+++...... .......+++.|+|||++.+...++.++|||
T Consensus 124 i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 188 (291)
T cd07870 124 ILHRDLKPQNLLISYLGELKLADFGLARAKSIPS---------------QTYSSEVVTLWYRPPDVLLGATDYSSALDIW 188 (291)
T ss_pred cccCCCChHHEEEcCCCcEEEeccccccccCCCC---------------CCCCCccccccccCCceeecCCCCCcHHHHH
Confidence 9999999999999999999999999997532111 0112346789999999987645578899999
Q ss_pred HHHHHHHHhhc---CCCchhHHHH-HHHHhhhcC--------------C---------CCCc------cccCCHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQI-VLSDLKQKG--------------E---------LPPS------WVAKFSEQESLL 640 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~-~~~~l~~~~--------------~---------~p~~------~~~~~~e~~~LI 640 (1170)
||||++|+|++ ||........ ........+ . .+.. .....+++.+++
T Consensus 189 slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 268 (291)
T cd07870 189 GAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLA 268 (291)
T ss_pred HHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhcccccchhccccCCcchhhhccccCCChHHHHHH
Confidence 99999999997 6754433211 111110000 0 0000 011245788999
Q ss_pred HHccCCCCCCCCCHHHHHhccCC
Q 001059 641 RRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.+||..||.+|||+.+++.|+||
T Consensus 269 ~~~l~~dp~~R~t~~~~l~h~~~ 291 (291)
T cd07870 269 SQMLMMFPKDRISAQDALLHPYF 291 (291)
T ss_pred HHHhCcCcccCcCHHHHhcCCCC
Confidence 99999999999999999999997
|
Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess |
| >KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-36 Score=339.08 Aligned_cols=256 Identities=27% Similarity=0.450 Sum_probs=206.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
-..|+++++||+||.++||++... +.+.||+|++.....+.....-+.+|+..|.+| .|.+||++|++=+
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s-~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv-------- 430 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNS-DKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV-------- 430 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecC-CCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec--------
Confidence 357999999999999999999886 567788888776666667778899999999999 5999999998731
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCH-HHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK-ELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e-~~~~~i~~qI~~gL~yLHs 511 (1170)
...++||||||-+.+|..+|.+.....+ -..+.|..|++.|+.++|.
T Consensus 431 --------------------------------~d~~lYmvmE~Gd~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~ 478 (677)
T KOG0596|consen 431 --------------------------------TDGYLYMVMECGDIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQ 478 (677)
T ss_pred --------------------------------cCceEEEEeecccccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHH
Confidence 2578999999999999999998776433 4788899999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-------
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------- 584 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------- 584 (1170)
+||||-||||.|+|+- .|.+||+|||+|..+..+ +.++...+.+||+.|||||++....
T Consensus 479 ~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~D-------------TTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~ 544 (677)
T KOG0596|consen 479 HGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPD-------------TTSIVKDSQVGTVNYMSPEALTDMSSSRENGK 544 (677)
T ss_pred hceeecCCCcccEEEE-eeeEEeeeechhcccCcc-------------ccceeeccccCcccccCHHHHhhccccccCCC
Confidence 9999999999999985 589999999999876432 2344456789999999999985421
Q ss_pred ---CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC---CCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 585 ---KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG---ELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 585 ---~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~---~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
+.+.++||||||||||+|++ ||.........+..+.... .+|..... .++.++++.||..||++|||+.
T Consensus 545 ~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P~~~Iefp~~~~~--~~li~~mK~CL~rdPkkR~si~ 622 (677)
T KOG0596|consen 545 SKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDPNHEIEFPDIPEN--DELIDVMKCCLARDPKKRWSIP 622 (677)
T ss_pred cceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCCCccccccCCCCc--hHHHHHHHHHHhcCcccCCCcH
Confidence 25689999999999999995 8876655444443333221 22222211 2489999999999999999999
Q ss_pred HHHhccCCCCc
Q 001059 656 ELLQDALPPQM 666 (1170)
Q Consensus 656 eiL~~~~~~~~ 666 (1170)
++|+|||....
T Consensus 623 eLLqhpFl~~~ 633 (677)
T KOG0596|consen 623 ELLQHPFLQIQ 633 (677)
T ss_pred HHhcCcccccc
Confidence 99999987764
|
|
| >cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-35 Score=327.02 Aligned_cols=251 Identities=26% Similarity=0.424 Sum_probs=196.9
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|++.+.||+|+||.||+|.+..+++.||+|+++....+.. .....+|+.+++++. ||||+++++++.+.
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~-~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~--------- 70 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE-QVNNLREIQALRRLSPHPNILRLIEVLFDR--------- 70 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch-hhhHHHHHHHHhhcCCCCCccceEEEEecC---------
Confidence 6788999999999999999999999999999875433322 234567999999885 99999999887431
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....+++||||++++|.+.+... ..+++..++.++.||+.||+|||++|+
T Consensus 71 -----------------------------~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i 121 (282)
T cd07831 71 -----------------------------KTGRLALVFELMDMNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGI 121 (282)
T ss_pred -----------------------------CCCcEEEEEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 12467999999999998888754 568999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++. +.+||+|||+++.+.... ..+...+++.|+|||++.+...++.++||||
T Consensus 122 ~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s 184 (282)
T cd07831 122 FHRDIKPENILIKD-DILKLADFGSCRGIYSKP----------------PYTEYISTRWYRAPECLLTDGYYGPKMDIWA 184 (282)
T ss_pred eecccCHHHEEEcC-CCeEEEecccccccccCC----------------CcCCCCCCcccCChhHhhcCCCCCcchhHHH
Confidence 99999999999999 999999999998653111 1123468899999998765456789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcC------------------CCCC--------ccccCCHHHHHHHHHccC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKG------------------ELPP--------SWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~------------------~~p~--------~~~~~~~e~~~LI~~~L~ 645 (1170)
|||++|||++ ||......+.........+ ..+. .....+.++.++|++||+
T Consensus 185 lGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 264 (282)
T cd07831 185 VGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLA 264 (282)
T ss_pred HHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccccccccCcccccccHHHHcccccHHHHHHHHHHhc
Confidence 9999999996 6654433222221111000 0111 112346789999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 001059 646 PSPSDRPSATELLQDALP 663 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~~~~ 663 (1170)
++|.+||++.++++|+||
T Consensus 265 ~~P~~R~~~~~~l~~~~~ 282 (282)
T cd07831 265 YDPDERITAKQALRHPYF 282 (282)
T ss_pred cCcccccCHHHHhhCCCC
Confidence 999999999999999996
|
Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. |
| >cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=345.63 Aligned_cols=251 Identities=22% Similarity=0.304 Sum_probs=195.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-----cEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDG-----RHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg-----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|++..+| ..||||+++.... ......+.+|+.+++.+ +|||||+++++|.+
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~-- 113 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH-TDEREALMSELKILSHLGQHKNIVNLLGACTH-- 113 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC-HHHHHHHHHHHHHHHhhccCCceeeEeeEecC--
Confidence 468999999999999999999975444 5799999975432 23456788999999999 89999999998733
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 487 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 487 (1170)
...+|++||||+ |+|.+++...
T Consensus 114 --------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 155 (374)
T cd05106 114 --------------------------------------GGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSS 155 (374)
T ss_pred --------------------------------------CCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccc
Confidence 345789999996 5888877532
Q ss_pred ---------------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 488 ---------------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 488 ---------------------------------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
.++++..+++++.||+.||+|||++||+|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiH 235 (374)
T cd05106 156 DYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIH 235 (374)
T ss_pred cccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEe
Confidence 23778889999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+|||++.++++||+|||+++....... ........+++.|||||++.+ ..++.++||||||
T Consensus 236 rDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~DvwSlG 301 (374)
T cd05106 236 RDVAARNVLLTDGRVAKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFD-CVYTVQSDVWSYG 301 (374)
T ss_pred ccCchheEEEeCCCeEEEeeceeeeeccCCcc-------------eeeccCCCCccceeCHHHhcC-CCCCccccHHHHH
Confidence 99999999999999999999999975422110 001112245678999999876 5689999999999
Q ss_pred HHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 597 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 597 viL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|++|||++ ||.............. .+..+......++++.++|.+||+.||.+|||+.++++.
T Consensus 302 vil~ellt~G~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~ 368 (374)
T cd05106 302 ILLWEIFSLGKSPYPGILVNSKFYKMVK-RGYQMSRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQL 368 (374)
T ss_pred HHHHHHHhCCCCCCccccccHHHHHHHH-cccCccCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999984 7765444333333332 222222223346799999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti |
| >cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-35 Score=327.68 Aligned_cols=252 Identities=25% Similarity=0.438 Sum_probs=201.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|++|.||+|+++.+|..||||+++..... .....+.+|+.+++.++||||++++++|.+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---------- 69 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEE-GTPSTAIREISLMKELKHENIVRLHDVIHT---------- 69 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccc-cchHHHHHHHHHHHhhcCCCEeeeeeeEee----------
Confidence 589999999999999999999999999999999754332 234567789999999999999999988743
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++++|.+++... ..+++..+..++.||+.||+|||++
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (284)
T cd07836 70 ------------------------------ENKLMLVFEYMDKDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHEN 119 (284)
T ss_pred ------------------------------CCcEEEEEecCCccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHC
Confidence 3467999999999998887654 3589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||++++++.+||+|||++....... .......+|+.|+|||++.+...++.++||
T Consensus 120 ~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv 184 (284)
T cd07836 120 RVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV---------------NTFSNEVVTLWYRAPDVLLGSRTYSTSIDI 184 (284)
T ss_pred CeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc---------------cccccccccccccChHHhcCCCCCCcHHHH
Confidence 99999999999999999999999999997543211 011234678999999998775567899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhc------------------CCCCC--------ccccCCHHHHHHHHHc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK------------------GELPP--------SWVAKFSEQESLLRRL 643 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~------------------~~~p~--------~~~~~~~e~~~LI~~~ 643 (1170)
|||||++|+|++ ||......+......... ...|. .....++.+.++|.+|
T Consensus 185 ~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 264 (284)
T cd07836 185 WSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRL 264 (284)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHH
Confidence 999999999997 665444333222221110 00010 0123456788999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 001059 644 MSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+.||.+||++.++++||||
T Consensus 265 l~~~p~~R~~~~~~l~~~~f 284 (284)
T cd07836 265 LQLNPELRISAHDALQHPWF 284 (284)
T ss_pred hcCCcccCCCHHHHhcCCCC
Confidence 99999999999999999997
|
Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. |
| >cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=320.33 Aligned_cols=249 Identities=31% Similarity=0.553 Sum_probs=205.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|+..+.||+|+||.||+|.+..+++.+|||.+............+.+|+.+|+.++||||+++++.+..
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---------- 70 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLE---------- 70 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEec----------
Confidence 5889999999999999999999999999999998665555556789999999999999999999987632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+++||||+++ +|.+++... ..+++..++.++.|++.||+|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~ 120 (256)
T cd08220 71 ------------------------------DKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTK 120 (256)
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3568999999975 899998764 3489999999999999999999999
Q ss_pred CccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 GIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
|++||||||+||+++.+ +.+||+|||++....... ......|++.|+|||.+.+ ..++.++|
T Consensus 121 ~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 183 (256)
T cd08220 121 LILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS----------------KAYTVVGTPCYISPELCEG-KPYNQKSD 183 (256)
T ss_pred CeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc----------------cccccccCCcccCchhccC-CCCCcccc
Confidence 99999999999999865 468999999998653211 1122468899999999987 56889999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||+++|+|++ ||.............. ...++.....++++.+++.+||+.+|.+|||+.++++|||+
T Consensus 184 v~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~p~~ 256 (256)
T cd08220 184 IWALGCVLYELASLKRAFEAANLPALVLKIMS--GTFAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQPIC 256 (256)
T ss_pred hHHHHHHHHHHHhCCCCcccCchHHHHHHHHh--cCCCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence 9999999999997 7765554444433332 22222233467789999999999999999999999999985
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with |
| >cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.9e-35 Score=326.88 Aligned_cols=254 Identities=28% Similarity=0.460 Sum_probs=208.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.+..+|+.||+|.+.... +......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEE-AEDEIEDIQQEIQFLSQCRSPYITKYYGSFLK--------- 70 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccc-cchHHHHHHHHHHHHHHcCCCCeeeeeEEEEE---------
Confidence 46888999999999999999999999999999987543 23345678899999999999999999988743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+++||++ ++|.+++... .+++..++.++.||+.||.|||+++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~ql~~~l~~lh~~~ 118 (274)
T cd06609 71 -------------------------------GSKLWIIMEYCGGGSCLDLLKPG-KLDETYIAFILREVLLGLEYLHEEG 118 (274)
T ss_pred -------------------------------CCeEEEEEEeeCCCcHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 357899999997 4898888765 7999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.++|+|||+++...... .......|++.|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~sDv~ 182 (274)
T cd06609 119 KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM---------------SKRNTFVGTPFWMAPEVIKQ-SGYDEKADIW 182 (274)
T ss_pred cccCCCCHHHEEECCCCCEEEcccccceeecccc---------------cccccccCCccccChhhhcc-CCCCchhhHH
Confidence 9999999999999999999999999998653221 01233578899999999987 4589999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
||||++|+|++ ||.............. ...+..... .++++.+++.+||..+|++|||+.++++|+|+.....
T Consensus 183 slG~il~~l~tg~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~ 259 (274)
T cd06609 183 SLGITAIELAKGEPPLSDLHPMRVLFLIPK--NNPPSLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK 259 (274)
T ss_pred HHHHHHHHHHhCCCCcccCchHHHHHHhhh--cCCCCCcccccCHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence 99999999997 6655444333322222 122221112 5678999999999999999999999999999988754
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) |
| >cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-34 Score=326.77 Aligned_cols=257 Identities=24% Similarity=0.425 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.+ +||||++++++|....
T Consensus 17 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~---~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~----- 88 (286)
T cd06638 17 SDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH---DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKD----- 88 (286)
T ss_pred ccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc---chHHHHHHHHHHHHHHhcCCCeeeeeeeeeecc-----
Confidence 478999999999999999999999999999999876422 2235678899999999 6999999999875321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
.....++|++|||++ ++|.+++.. ...+++..++.++.|++.||.
T Consensus 89 ------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~ 138 (286)
T cd06638 89 ------------------------------VKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQ 138 (286)
T ss_pred ------------------------------cCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHH
Confidence 013457899999997 588887642 346889999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---- 583 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---- 583 (1170)
|||+++++||||||+||+++.++.+||+|||+++...... .......|++.|+|||++...
T Consensus 139 ~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~ 203 (286)
T cd06638 139 HLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTR---------------LRRNTSVGTPFWMAPEVIACEQQLD 203 (286)
T ss_pred HHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCC---------------CccccccCCCcccChhhhchhhhcc
Confidence 9999999999999999999999999999999987643211 011234689999999987531
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
..++.++|||||||++|||++ ||..........................+.++.++|.+||+.||++|||+.++++|
T Consensus 204 ~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 204 STYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred ccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCCCcccCCCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 347889999999999999997 66655443333222111111111112245689999999999999999999999999
Q ss_pred cCC
Q 001059 661 ALP 663 (1170)
Q Consensus 661 ~~~ 663 (1170)
+|+
T Consensus 284 ~~~ 286 (286)
T cd06638 284 VFI 286 (286)
T ss_pred ccC
Confidence 986
|
Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear |
| >cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=323.86 Aligned_cols=257 Identities=22% Similarity=0.375 Sum_probs=204.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||.|+||.||+|.++.+++.|++|++..... ....+.+|+.+++++ +||||++++++|.....
T Consensus 6 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~----- 77 (275)
T cd06608 6 GIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED---EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP----- 77 (275)
T ss_pred hheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch---hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC-----
Confidence 689999999999999999999998999999999875432 346788999999999 79999999999855310
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+|++|||+++ +|.+++.. ...+++..++.++.|++.||.|
T Consensus 78 -----------------------------~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~ 128 (275)
T cd06608 78 -----------------------------PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAY 128 (275)
T ss_pred -----------------------------CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 0134678999999975 88888764 3469999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC----C
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----P 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~----~ 584 (1170)
||++|++|+||+|+||+++.++.+||+|||++....... .......|++.|+|||++... .
T Consensus 129 lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 193 (275)
T cd06608 129 LHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTL---------------GRRNTFIGTPYWMAPEVIACDEQPDA 193 (275)
T ss_pred HhcCCcccCCCCHHHEEEccCCeEEECCCccceecccch---------------hhhcCccccccccCHhHhcccccccC
Confidence 999999999999999999999999999999987543211 011334689999999987542 3
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
.++.++|||||||++|+|++ ||..........................++++++||.+||..||.+|||+.++++||
T Consensus 194 ~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~ 273 (275)
T cd06608 194 SYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENWSKKFNDFISECLIKNYEQRPFMEELLEHP 273 (275)
T ss_pred CccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCCCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCC
Confidence 47789999999999999997 776554444443333221111111223556899999999999999999999999999
Q ss_pred CC
Q 001059 662 LP 663 (1170)
Q Consensus 662 ~~ 663 (1170)
|.
T Consensus 274 ~~ 275 (275)
T cd06608 274 FI 275 (275)
T ss_pred CC
Confidence 85
|
Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I |
| >KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=357.42 Aligned_cols=249 Identities=24% Similarity=0.344 Sum_probs=207.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..+.+..+.||+|+||+||+|+... +...||||.++.. .+....++|.||+++|..|+|||||+++|.|.+
T Consensus 485 r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~-a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~--- 560 (774)
T KOG1026|consen 485 RSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK-AENQARQDFRREAELLAELQHPNIVRLLGVCRE--- 560 (774)
T ss_pred hhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc-ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEcc---
Confidence 3567788999999999999999752 3457999998743 344467899999999999999999999999943
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------C----CCHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------H----FDKE 493 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~----l~e~ 493 (1170)
...+|+|+|||. |+|.++|.... . ++..
T Consensus 561 -------------------------------------~~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~ 603 (774)
T KOG1026|consen 561 -------------------------------------GDPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTS 603 (774)
T ss_pred -------------------------------------CCeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHH
Confidence 456899999996 89999996431 2 7888
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
+.+.++.|||.||.||-++.+|||||-.+|+||.++..|||+|||+++.+...++.+. .....-..+
T Consensus 604 q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGLsRdiYssDYYk~-------------~~~t~lPIR 670 (774)
T KOG1026|consen 604 QFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGLSRDIYSSDYYKV-------------RGNTLLPIR 670 (774)
T ss_pred HHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceEEEecccccchhhhhhhhhcc-------------cCCceeeee
Confidence 9999999999999999999999999999999999999999999999997654433221 011234568
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
|||||.+.. ++|+.+||||||||+|||+++ |+.+..+.+....+. .+...+.+.++++++.+||..||+.+|.
T Consensus 671 WMppEsIly-~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~--~g~lL~~Pe~CP~~vY~LM~~CW~~~P~ 747 (774)
T KOG1026|consen 671 WMPPESILY-GKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIR--AGQLLSCPENCPTEVYSLMLECWNENPK 747 (774)
T ss_pred cCCHHHhhc-CcccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHH--cCCcccCCCCCCHHHHHHHHHHhhcCcc
Confidence 999999886 689999999999999999997 999888877765554 3444556678889999999999999999
Q ss_pred CCCCHHHHHh
Q 001059 650 DRPSATELLQ 659 (1170)
Q Consensus 650 ~RPta~eiL~ 659 (1170)
+||++++|-.
T Consensus 748 ~RPsF~eI~~ 757 (774)
T KOG1026|consen 748 RRPSFKEIHS 757 (774)
T ss_pred cCCCHHHHHH
Confidence 9999999843
|
|
| >cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=328.43 Aligned_cols=255 Identities=29% Similarity=0.451 Sum_probs=202.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|+||.||+|.++.+++.||+|+++...........+.+|+.+++.++||||+++++++..
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 71 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRR--------- 71 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEE---------
Confidence 46899999999999999999999999999999987655444455788999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHH-HHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV-FESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~-l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|++|||+++++.+. ......+++..++.++.||+.||+|||++|
T Consensus 72 -------------------------------~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~ 120 (288)
T cd07833 72 -------------------------------KGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHN 120 (288)
T ss_pred -------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 356899999998765554 445566999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.+||+|||++........ .......+++.|+|||++.+...++.++|||
T Consensus 121 i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~ 186 (288)
T cd07833 121 IIHRDIKPENILVSESGVLKLCDFGFARALRARPA--------------SPLTDYVATRWYRAPELLVGDTNYGKPVDVW 186 (288)
T ss_pred eecCCCCHHHeEECCCCCEEEEeeecccccCCCcc--------------ccccCcccccCCcCCchhcCCCCcCchhhHH
Confidence 99999999999999999999999999986532210 0113357889999999998854789999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CCC---------cc-ccCCHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LPP---------SW-VAKFSEQESLLR 641 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p~---------~~-~~~~~e~~~LI~ 641 (1170)
|||+++|+|++ ||................+. .++ .. ...++++.+||+
T Consensus 187 slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 266 (288)
T cd07833 187 AIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLK 266 (288)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCccccccccCCCCCcHHHHHhcCCccchHHHHHHH
Confidence 99999999997 55443332222111110000 000 00 112568899999
Q ss_pred HccCCCCCCCCCHHHHHhccCC
Q 001059 642 RLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+||..+|++|||+.++++|+||
T Consensus 267 ~~l~~~p~~Rps~~~il~~~~f 288 (288)
T cd07833 267 ACLRMDPKERLTCDELLQHPYF 288 (288)
T ss_pred HHhccCchhcccHHHHhcCCCC
Confidence 9999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning |
| >cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-35 Score=329.69 Aligned_cols=255 Identities=23% Similarity=0.418 Sum_probs=203.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||.||+|.+..+|+.||+|.++... .......+.+|+.++++++||||+++++++..
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL-DESKFNQIIMELDILHKAVSPYIVDFYGAFFI--------- 70 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc-CHHHHHHHHHHHHHHHhcCCCcHHhhhhheec---------
Confidence 47899999999999999999999999999999987542 33345678999999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY---DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++||||++ +|..++... ..+++..+..++.||+.||.|||
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH 119 (286)
T cd06622 71 -------------------------------EGAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLK 119 (286)
T ss_pred -------------------------------CCeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4578999999975 888777653 36999999999999999999999
Q ss_pred h-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-----
Q 001059 511 G-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----- 584 (1170)
Q Consensus 511 s-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----- 584 (1170)
+ .||+||||||+||+++.++.+||+|||++..+... ......|++.|+|||.+.+..
T Consensus 120 ~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 182 (286)
T cd06622 120 EEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS-----------------LAKTNIGCQSYMAPERIKSGGPNQNP 182 (286)
T ss_pred hcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC-----------------ccccCCCccCccCcchhcCCCCCccC
Confidence 7 59999999999999999999999999998754211 112346888999999986522
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++|||||||++|+|++ ||.............. .....+......++++.+||.+||+.+|.+||++.++++|
T Consensus 183 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 183 TYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred CCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCCCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 35789999999999999997 7754333222211111 1222333334467899999999999999999999999999
Q ss_pred cCCCCch
Q 001059 661 ALPPQME 667 (1170)
Q Consensus 661 ~~~~~~~ 667 (1170)
+|+....
T Consensus 263 ~~~~~~~ 269 (286)
T cd06622 263 PWLVKYK 269 (286)
T ss_pred hhhhhcc
Confidence 9976653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-35 Score=325.15 Aligned_cols=253 Identities=29% Similarity=0.448 Sum_probs=206.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|+..+.||.|+||.||+|.++.+++.||+|.+..... ......+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--------- 70 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN-EAIQKQILRELDILHKCNSPYIVGFYGAFYN--------- 70 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC-hHHHHHHHHHHHHHHHCCCCchhhhheeeec---------
Confidence 468889999999999999999999999999999875433 2455678999999999999999999987732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh-
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG- 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs- 511 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (265)
T cd06605 71 -------------------------------NGDISICMEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEK 119 (265)
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCC
Confidence 357899999998 6999998876 779999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
.|++|+||||+||+++.++.++|+|||.+....... .....++..|+|||.+.+ ..++.++|
T Consensus 120 ~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~-----------------~~~~~~~~~y~~PE~~~~-~~~~~~~D 181 (265)
T cd06605 120 HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL-----------------AKTFVGTSSYMAPERIQG-NDYSVKSD 181 (265)
T ss_pred CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH-----------------hhcccCChhccCHHHHcC-CCCCchhh
Confidence 999999999999999999999999999987653221 011568899999999987 57899999
Q ss_pred hHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|||||+++|+|++ ||.... .......... ....+..... .++++.++|.+||..||.+|||+.+++.||||
T Consensus 182 v~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 260 (265)
T cd06605 182 IWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIV-NEPPPRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFI 260 (265)
T ss_pred HHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchh
Confidence 9999999999997 665431 1111111111 1122222222 56789999999999999999999999999999
Q ss_pred CCch
Q 001059 664 PQME 667 (1170)
Q Consensus 664 ~~~~ 667 (1170)
.+.+
T Consensus 261 ~~~~ 264 (265)
T cd06605 261 KKYE 264 (265)
T ss_pred hccc
Confidence 7653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity |
| >cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=331.10 Aligned_cols=255 Identities=22% Similarity=0.381 Sum_probs=205.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+|++++.||.|+||.||+|.+..+|+.||+|.+...... ..+.+.+|+.+++.++||||++++++|..
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 87 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV-------- 87 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEec--------
Confidence 37899999999999999999999999999999998754332 34668899999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++ ++|.+++.+ ..+++.++..++.|++.||.|||+.
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~l~~~L~~LH~~ 134 (297)
T cd06656 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALDFLHSN 134 (297)
T ss_pred --------------------------------CCEEEEeecccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 588887754 4589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+|||++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+
T Consensus 135 ~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 198 (297)
T cd06656 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (297)
T ss_pred CcccCCCCHHHEEECCCCCEEECcCccceEccCCc---------------cCcCcccCCccccCHHHHcC-CCCCcHHHH
Confidence 99999999999999999999999999987542211 01123468999999999987 568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||||++|+|++ ||..........................++.+.+||.+||..||.+||++.++++|+|+....
T Consensus 199 ~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 276 (297)
T cd06656 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAK 276 (297)
T ss_pred HHHHHHHHHHHhCCCCCCCCCcchheeeeccCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhcccc
Confidence 999999999997 776544332222222111111122334566889999999999999999999999999987653
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding |
| >cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=332.93 Aligned_cols=249 Identities=24% Similarity=0.354 Sum_probs=197.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..+|++.+.||+|+||+||+|.+..+|.. ||+|+++.. ......+++.+|+.+++.++||||++++++|..
T Consensus 6 ~~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~---- 80 (316)
T cd05108 6 ETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT---- 80 (316)
T ss_pred hhhceeeeeeecCCCceEEEEEEecCCCccceeEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcC----
Confidence 36899999999999999999998766664 899988633 233455678999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...++++||++ |+|.+.+... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (316)
T cd05108 81 -------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMN 123 (316)
T ss_pred -------------------------------------CCceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 23478999996 6899988764 45889999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... ........++..|+|||++.+ ..++
T Consensus 124 ~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~-------------~~~~~~~~~~~~y~apE~~~~-~~~~ 189 (316)
T cd05108 124 YLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEK-------------EYHAEGGKVPIKWMALESILH-RIYT 189 (316)
T ss_pred HHHhcCeeccccchhheEecCCCcEEEccccccccccCCCc-------------ceeccCCccceeecChHHhcc-CCCC
Confidence 99999999999999999999999999999999986532210 011122345778999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+. ..... ....++....++.++.+++.+||..||.+||++.+++.+
T Consensus 190 ~~~Di~slGv~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~ 264 (316)
T cd05108 190 HQSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 264 (316)
T ss_pred chhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHh-CCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999875 6654433332 22222 333333344566789999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor |
| >cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-35 Score=337.24 Aligned_cols=263 Identities=25% Similarity=0.337 Sum_probs=206.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.+.+.||+|+||+||+|++..+|+.||||.+............+.+|+.+++.++||||+++++++....
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~------ 77 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPH------ 77 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheeccc------
Confidence 35799999999999999999999999999999998754433334556789999999999999999998763220
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......+|++|||++++|.+++.....+++..++.++.||+.||.|||+++
T Consensus 78 -----------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ 128 (337)
T cd07858 78 -----------------------------REAFNDVYIVYELMDTDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSAN 128 (337)
T ss_pred -----------------------------ccccCcEEEEEeCCCCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 011245799999999999999988888999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||||+|||++.++.+||+|||+++...... .......++..|+|||.+.....++.++|||
T Consensus 129 i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Diw 193 (337)
T cd07858 129 VLHRDLKPSNLLLNANCDLKICDFGLARTTSEKG---------------DFMTEYVVTRWYRAPELLLNCSEYTTAIDVW 193 (337)
T ss_pred EecCCCCHHHEEEcCCCCEEECcCccccccCCCc---------------ccccccccccCccChHHHhcCCCCCCcccHH
Confidence 9999999999999999999999999998643211 0113346889999999887544588999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHh-----------------------hhcCC-----CCCccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDL-----------------------KQKGE-----LPPSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l-----------------------~~~~~-----~p~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||...........+. ..... ........++++.++|++
T Consensus 194 slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 273 (337)
T cd07858 194 SVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEK 273 (337)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHH
Confidence 99999999996 564322111110000 00000 001123466788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||+.+|.+|||+.++++|+|+...
T Consensus 274 ~l~~~P~~Rps~~ell~h~~~~~~ 297 (337)
T cd07858 274 MLVFDPSKRITVEEALAHPYLASL 297 (337)
T ss_pred HhcCChhhccCHHHHHcCcchhhh
Confidence 999999999999999999998754
|
Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati |
| >KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-36 Score=317.89 Aligned_cols=257 Identities=27% Similarity=0.393 Sum_probs=209.3
Q ss_pred ccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
-...+||.+. ++||-|-.|+|..|.++.||+.+|+|++.. ..+..||++..-.. .|||||.++++|...
T Consensus 57 ~~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D-------s~KARrEVeLHw~~s~h~~iV~IidVyeNs-- 127 (400)
T KOG0604|consen 57 YSITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD-------SPKARREVELHWMASGHPHIVSIIDVYENS-- 127 (400)
T ss_pred ccchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc-------CHHHHhHhhhhhhhcCCCceEEeehhhhhh--
Confidence 3346778774 579999999999999999999999998852 34577888876555 699999999887321
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEG 505 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~g 505 (1170)
.....++.||||.+. |.|...++.++. |++.++..|+.||..|
T Consensus 128 ----------------------------------~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~A 173 (400)
T KOG0604|consen 128 ----------------------------------YQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLA 173 (400)
T ss_pred ----------------------------------ccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHH
Confidence 123578999999996 589999987765 9999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.|||+.+|.||||||+|+|... +..+||+|||+|+.-..+ ....+.|.||+|.|||++..
T Consensus 174 v~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~----------------~~L~TPc~TPyYvaPevlg~ 237 (400)
T KOG0604|consen 174 VRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEP----------------GDLMTPCFTPYYVAPEVLGP 237 (400)
T ss_pred HHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCC----------------ccccCCcccccccCHHHhCc
Confidence 99999999999999999999975 456999999999864211 12356689999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHH----HHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~----~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
..|+..+|+||+||++|-|++ ||+..... ....++......+| +.|..++..++++|+.+|..+|.+|.|+
T Consensus 238 -eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI 316 (400)
T KOG0604|consen 238 -EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTI 316 (400)
T ss_pred -hhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeH
Confidence 579999999999999999997 66533221 11223333444555 5888899999999999999999999999
Q ss_pred HHHHhccCCCCch
Q 001059 655 TELLQDALPPQME 667 (1170)
Q Consensus 655 ~eiL~~~~~~~~~ 667 (1170)
.+++.|||..+..
T Consensus 317 ~~~m~hpwi~~~~ 329 (400)
T KOG0604|consen 317 EEVMDHPWINQYE 329 (400)
T ss_pred HHhhcCchhcccc
Confidence 9999999987764
|
|
| >KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-36 Score=335.77 Aligned_cols=248 Identities=24% Similarity=0.349 Sum_probs=208.9
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 440 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 440 (1170)
++||+|.||+||-|.++.+|+.||||+|.+-.-......++.+|+.+|.+++||.||.+-..|
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~----------------- 632 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF----------------- 632 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee-----------------
Confidence 689999999999999999999999999976554444557899999999999999999987655
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 441 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE--SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~--~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
+....+|+|||-+.|++...+- +.+++++.....++.||+.||.|||-+||+|.|
T Consensus 633 -----------------------ET~ervFVVMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCD 689 (888)
T KOG4236|consen 633 -----------------------ETPERVFVVMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCD 689 (888)
T ss_pred -----------------------cCCceEEEEehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeecc
Confidence 2357899999999998777653 456799999999999999999999999999999
Q ss_pred CCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 519 LTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 519 LKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
|||+|||+.+. ..+||||||+|+++.... ...+.+|||+|+|||+++. ..|+..-||||+
T Consensus 690 LKPENVLLas~~~FPQvKlCDFGfARiIgEks----------------FRrsVVGTPAYLaPEVLrn-kGyNrSLDMWSV 752 (888)
T KOG4236|consen 690 LKPENVLLASASPFPQVKLCDFGFARIIGEKS----------------FRRSVVGTPAYLAPEVLRN-KGYNRSLDMWSV 752 (888)
T ss_pred CCchheeeccCCCCCceeeccccceeecchhh----------------hhhhhcCCccccCHHHHhh-ccccccccceee
Confidence 99999999754 469999999999875433 1356799999999999998 569999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||+|--++ ||....+-.. ++......+| ..|..+++++.+||..+|+..-.+|.|.+..|.|+|.+...
T Consensus 753 GVIiYVsLSGTFPFNEdEdInd--QIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~yq 826 (888)
T KOG4236|consen 753 GVIIYVSLSGTFPFNEDEDIND--QIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDYQ 826 (888)
T ss_pred eEEEEEEecccccCCCccchhH--HhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcch
Confidence 999998886 7754433222 2222334444 47899999999999999999999999999999999998874
|
|
| >cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=321.37 Aligned_cols=249 Identities=25% Similarity=0.469 Sum_probs=199.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|+++.+|+.||||.++... ........+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 73 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIE-------- 73 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEE--------
Confidence 68999999999999999999999999999999887533 233445678899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|
T Consensus 74 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 121 (267)
T cd08228 74 --------------------------------DNELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEH 121 (267)
T ss_pred --------------------------------CCeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHH
Confidence 346799999997 588887753 3448999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++|+||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.
T Consensus 122 LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~-~~~~~ 185 (267)
T cd08228 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchh---------------HHHhcCCCCccccChhhhcc-CCCCc
Confidence 999999999999999999999999999999988653211 01123468899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCCCc-cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPS-WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~-~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++||||||+++|||++ ||..... .......+. ....++. ....+..+.++|.+||+.+|++||++.++++.
T Consensus 186 ~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~ 261 (267)
T cd08228 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIE-QCDYPPLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQI 261 (267)
T ss_pred hhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHh-cCCCCCCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHH
Confidence 9999999999999997 6654322 122222222 2223332 23455689999999999999999999999975
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase |
| >cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=318.49 Aligned_cols=257 Identities=33% Similarity=0.498 Sum_probs=206.9
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|...+.||+|+||.||+|.+..+++.||+|.++...........+.+|+.+++.++||||+++++.+.
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~----------- 69 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEV----------- 69 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEe-----------
Confidence 478899999999999999999989999999999876655456778999999999999999999998752
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....+++++||++ ++|.+++.....+++..++.++.|++.||+|||++|+
T Consensus 70 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i 120 (264)
T cd06626 70 -----------------------------HREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGI 120 (264)
T ss_pred -----------------------------cCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCc
Confidence 2456899999997 5899999887779999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--CCCccchh
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADM 592 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~ksDI 592 (1170)
+|+||||+||+++.++.+||+|||++.......... ........+++.|+|||++.+.. .++.++||
T Consensus 121 ~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv 189 (264)
T cd06626 121 VHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTM-----------GEEVQSLAGTPAYMAPEVITGGKGKGHGRAADI 189 (264)
T ss_pred ccCCCCHHHEEECCCCCEEEcccccccccCCCCCcc-----------cccccCCcCCcCccChhhccCCCCCCCCcccch
Confidence 999999999999999999999999998754322100 00012346889999999988632 27899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhh-cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQ-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~-~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||||+++|+|++ ||............+.. .....+.....++.+.++|.+||+.+|.+|||+.++++|+|+
T Consensus 190 ~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~ 264 (264)
T cd06626 190 WSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV 264 (264)
T ss_pred HHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence 999999999996 77654332222222221 111122333447789999999999999999999999999985
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4 |
| >KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=312.20 Aligned_cols=257 Identities=27% Similarity=0.428 Sum_probs=209.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++.+.+..||.|+.|.||+++++.+|..+|||.+.... ..+...+++..+.++...+ .|+||+++|+|+.
T Consensus 91 indl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~-Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~------- 162 (391)
T KOG0983|consen 91 INDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTG-NKEENKRILMDLDVVLKSHDCPYIVQCFGYFIT------- 162 (391)
T ss_pred hHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccC-CHHHHHHHHHhhhHHhhccCCCeeeeeeeEEee-------
Confidence 467888899999999999999999999999999998544 4456778888888877664 8999999999954
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++|.||.|..-+..++.+ .++++|..+-++...++.||.||..
T Consensus 163 ---------------------------------n~dV~IcMelMs~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe 209 (391)
T KOG0983|consen 163 ---------------------------------NTDVFICMELMSTCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE 209 (391)
T ss_pred ---------------------------------CchHHHHHHHHHHHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH
Confidence 234678999998777776654 4579999999999999999999986
Q ss_pred -CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCc
Q 001059 512 -QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDE 588 (1170)
Q Consensus 512 -~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ 588 (1170)
+||||||+||+|||+|..|++||||||++-++... ..++...|-+.|||||.+.- .+.|+.
T Consensus 210 KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdS----------------kAhtrsAGC~~YMaPERidp~~~~kYDi 273 (391)
T KOG0983|consen 210 KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDS----------------KAHTRSAGCAAYMAPERIDPPDKPKYDI 273 (391)
T ss_pred hcceeecccCccceEEccCCCEEeecccccceeecc----------------cccccccCCccccCccccCCCCCCccch
Confidence 57999999999999999999999999999876432 12455679999999998864 356999
Q ss_pred cchhHHHHHHHHHhhc---CCCchh-HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
++|||||||+++||.| ||.... +-+..-.++...+...+.....++.+++|+..||.+|+.+||...++|+|+|..
T Consensus 274 RaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~ 353 (391)
T KOG0983|consen 274 RADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIK 353 (391)
T ss_pred hhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhcCccee
Confidence 9999999999999997 776643 333444444433333333344789999999999999999999999999999977
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
..+
T Consensus 354 ~ye 356 (391)
T KOG0983|consen 354 RYE 356 (391)
T ss_pred ecc
Confidence 664
|
|
| >cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=324.40 Aligned_cols=256 Identities=21% Similarity=0.390 Sum_probs=201.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|++.+.||.|+||.||+|.+..+++.||+|++.... .....+..|+.+++++ +||||++++++|....
T Consensus 16 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~---~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~------ 86 (282)
T cd06636 16 GIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE---DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS------ 86 (282)
T ss_pred hhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh---HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc------
Confidence 57889999999999999999999999999999986432 2345688899999998 7999999998874321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.......+|++||||++ +|.+++... ..+++..++.++.||+.||+|||
T Consensus 87 ----------------------------~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH 138 (282)
T cd06636 87 ----------------------------PPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH 138 (282)
T ss_pred ----------------------------ccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 00124678999999974 898888653 35888999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~ 586 (1170)
++||+||||||+||+++.++.++|+|||++....... .......|++.|+|||++.. ...+
T Consensus 139 ~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~l~~~~~~~~~~ 203 (282)
T cd06636 139 AHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDATY 203 (282)
T ss_pred HCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccc---------------cCCCcccccccccCHhhcCcccCcCcCC
Confidence 9999999999999999999999999999987542111 01133578999999998753 2357
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+.++|||||||++|||++ ||....+......... ...........++++.+||.+||+.||.+|||+.++++|+|+
T Consensus 204 ~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~ 282 (282)
T cd06636 204 DYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPPPKLKSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI 282 (282)
T ss_pred CcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhh-CCCCCCcccccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence 889999999999999997 7755443333222211 111112223456789999999999999999999999999996
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea |
| >cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=318.48 Aligned_cols=251 Identities=30% Similarity=0.452 Sum_probs=205.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|+..+.||+|+||+||+|.+..+++.|++|.+..... .......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------- 73 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTERE------- 73 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEec-------
Confidence 36677899999999999999998999999999876442 23345678999999999999999999987632
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||+++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 120 (258)
T cd06632 74 ---------------------------------EDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHD 120 (258)
T ss_pred ---------------------------------CCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 899999887789999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|++|+||||+||+++.++.+||+|||++....... ......|++.|+|||.+.....++.++|
T Consensus 121 ~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~----------------~~~~~~~~~~y~~pe~~~~~~~~~~~~D 184 (258)
T cd06632 121 RNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFS----------------FAKSFKGSPYWMAPEVIAQQGGYGLAAD 184 (258)
T ss_pred CCcccCCCCHHHEEECCCCCEEEccCccceeccccc----------------cccccCCCcceeCHHHhcCCCCCCchhh
Confidence 999999999999999999999999999987643211 1133568999999999876333889999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+|||||++|+|++ ||.............. ....+......++.+.+++++||+.+|.+||++.++++|||+
T Consensus 185 ~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~ 258 (258)
T cd06632 185 IWSLGCTVLEMATGKPPWSQLEGVAAVFKIGR-SKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLEHPFV 258 (258)
T ss_pred hHHHHHHHHHHHhCCCCcccCcHHHHHHHHHh-cccCCCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence 9999999999997 7765544333333222 123333344566789999999999999999999999999985
|
Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops |
| >cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=323.74 Aligned_cols=258 Identities=26% Similarity=0.417 Sum_probs=202.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|.++.+|+.+|+|.+.... .....+.+|+.+++++ +||||++++++|....
T Consensus 21 ~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~---~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~----- 92 (291)
T cd06639 21 TDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS---DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKAD----- 92 (291)
T ss_pred CCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc---cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEecc-----
Confidence 478999999999999999999999999999999986432 2345678899999999 8999999999885421
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
......+|++|||++ ++|.+++.. ...+++..++.++.|++.||+
T Consensus 93 ------------------------------~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~ 142 (291)
T cd06639 93 ------------------------------KLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQ 142 (291)
T ss_pred ------------------------------ccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHH
Confidence 012346899999996 588887752 356899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC---
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--- 584 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--- 584 (1170)
|||++|++||||||+||+++.++.+||+|||++........ ......|++.|+|||++....
T Consensus 143 ~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~---------------~~~~~~~~~~y~aPE~~~~~~~~~ 207 (291)
T cd06639 143 HLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRL---------------RRNTSVGTPFWMAPEVIACEQQYD 207 (291)
T ss_pred HHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccc---------------cccCccCCccccChhhhcCCCCcc
Confidence 99999999999999999999999999999999986532110 112346889999999986522
Q ss_pred -CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 -KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 -~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++|||||||++|||++ ||.............................+.+||.+||+.+|.+||++.++++|
T Consensus 208 ~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 208 YSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred cccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 26889999999999999997 66654443333332221111111222345689999999999999999999999999
Q ss_pred cCCC
Q 001059 661 ALPP 664 (1170)
Q Consensus 661 ~~~~ 664 (1170)
||+.
T Consensus 288 ~~~~ 291 (291)
T cd06639 288 PFIK 291 (291)
T ss_pred cccC
Confidence 9984
|
Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre |
| >cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-34 Score=318.40 Aligned_cols=247 Identities=30% Similarity=0.550 Sum_probs=201.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||++.++.+++.||+|.++.... ....+.+.+|+.+++.++||||++++++|..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 69 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS-SSAVEDSRKEAVLLAKMKHPNIVAFKESFEA---------- 69 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc-hHHHHHHHHHHHHHHhCCCCCcceEEEEEEE----------
Confidence 58899999999999999999999999999999875432 3345678899999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||.|||++
T Consensus 70 ------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~ 119 (255)
T cd08219 70 ------------------------------DGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEK 119 (255)
T ss_pred ------------------------------CCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence 457899999997 589888764 34589999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+|+||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.++|+
T Consensus 120 ~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~-~~~~~~~Dv 183 (255)
T cd08219 120 RVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG---------------AYACTYVGTPYYVPPEIWEN-MPYNNKSDI 183 (255)
T ss_pred CcccCCCCcceEEECCCCcEEEcccCcceeecccc---------------cccccccCCccccCHHHHcc-CCcCchhhh
Confidence 99999999999999999999999999987543211 01123568999999999987 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
||||+++|+|++ ||............. .+..++.....+..+.++|.+||+.||.+|||+.+++...
T Consensus 184 ~slG~i~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~ 253 (255)
T cd08219 184 WSLGCILYELCTLKHPFQANSWKNLILKVC--QGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSRG 253 (255)
T ss_pred hhhchhheehhhccCCCCCCCHHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhcc
Confidence 999999999996 776555444433332 2333333334567899999999999999999999998753
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati |
| >cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-35 Score=323.49 Aligned_cols=249 Identities=23% Similarity=0.366 Sum_probs=205.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+|++.+.||.|+||.||+|.+..+++.||+|++...... ....+.+.+|+.++++++||||+++++++.
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 70 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQ---------- 70 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhc----------
Confidence 588999999999999999999999999999999754432 245678999999999999999999887652
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|++|||+. ++|.+.+.....+++..+..++.||+.||.|||++|
T Consensus 71 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~ 120 (258)
T cd05578 71 ------------------------------DEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKG 120 (258)
T ss_pred ------------------------------CCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCC
Confidence 2457899999996 589999887778999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++|+||||+||+++.++.++|+|||++....... ......|+..|+|||++.+ ..++.++|+|
T Consensus 121 i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~ 183 (258)
T cd05578 121 IIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT----------------LTTSTSGTPGYMAPEVLCR-QGYSVAVDWW 183 (258)
T ss_pred eeccCCCHHHeEEcCCCCEEEeecccccccCCCc----------------cccccCCChhhcCHHHHcc-cCCCCcccch
Confidence 9999999999999999999999999988653211 1123468889999999987 4589999999
Q ss_pred HHHHHHHHhhc---CCCchhH--HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH--HHHHhccCC
Q 001059 594 SLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA--TELLQDALP 663 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~--~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta--~eiL~~~~~ 663 (1170)
|||+++|+|++ ||..... .......... ..+......++.+.++|.+||+.||.+||++ .++++|+||
T Consensus 184 slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~ 258 (258)
T cd05578 184 SLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET--ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLKNHPYF 258 (258)
T ss_pred hhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc--ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence 99999999996 6665442 2222222221 2222233456789999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. |
| >cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.2e-35 Score=335.67 Aligned_cols=265 Identities=28% Similarity=0.391 Sum_probs=210.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|++..+|+.||||++..........+.+.+|+.+++.++||||+++++++....
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~-------- 72 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPS-------- 72 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccC--------
Confidence 488999999999999999999988999999998765443445678999999999999999999998764321
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
......+|++|+|++++|.+++.....+++..++.++.||+.||+|||++||+
T Consensus 73 ---------------------------~~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~ 125 (330)
T cd07834 73 ---------------------------PEDFNDVYIVTELMETDLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVI 125 (330)
T ss_pred ---------------------------cccccceEEEecchhhhHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 01124679999999999999998877899999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|||++.++.++|+|||++......... ........+|+.|+|||++.+...++.++|+|||
T Consensus 126 H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~sl 193 (330)
T cd07834 126 HRDLKPSNILVNSNCDLKICDFGLARGVDPDEDE------------KGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSV 193 (330)
T ss_pred cCCCCHHHEEEcCCCCEEEcccCceEeecccccc------------cccccccccccCcCCceeeecccCCCcchhHHHH
Confidence 9999999999999999999999999865322100 0112345789999999999885478999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHHHcc
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~~~L 644 (1170)
|+++|+|++ ||......+....+....+..+ ......++++.++|.+||
T Consensus 194 G~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 273 (330)
T cd07834 194 GCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKML 273 (330)
T ss_pred HHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHc
Confidence 999999997 6654433332222211111100 011234668899999999
Q ss_pred CCCCCCCCCHHHHHhccCCCCch
Q 001059 645 SPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+.+|.+|||+.++++|+||.+..
T Consensus 274 ~~~P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 274 VFDPKKRITADEALAHPYLAQLH 296 (330)
T ss_pred cCChhhCCCHHHHHhCccHHhhc
Confidence 99999999999999999998754
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and |
| >cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=323.86 Aligned_cols=255 Identities=27% Similarity=0.440 Sum_probs=203.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++.++|||++++++++...
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---------- 70 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSK---------- 70 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecC----------
Confidence 6788999999999999999998999999999986543334456788999999999999999999887331
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
....+|++|||++++|..++... ..+++..++.++.||+.||+|||++|++
T Consensus 71 ----------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~ 122 (287)
T cd07840 71 ----------------------------GKGSIYMVFEYMDHDLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGIL 122 (287)
T ss_pred ----------------------------CCCcEEEEeccccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCce
Confidence 02578999999999999888765 5799999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
|+||||+||++++++.+||+|||++........ ...+...++..|+|||.+.+...++.++|||||
T Consensus 123 h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~sl 188 (287)
T cd07840 123 HRDIKGSNILINNDGVLKLADFGLARPYTKRNS--------------ADYTNRVITLWYRPPELLLGATRYGPEVDMWSV 188 (287)
T ss_pred eccCcHHHeEEcCCCCEEEccccceeeccCCCc--------------ccccccccccccCCceeeEccccCChHHHHHHH
Confidence 999999999999999999999999986532210 012334678899999988765568899999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC---------------------------Ccccc-CCHHHHHHHHHcc
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGELP---------------------------PSWVA-KFSEQESLLRRLM 644 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p---------------------------~~~~~-~~~e~~~LI~~~L 644 (1170)
|+++|||++ ||...................+ ..... .++.+.++|++||
T Consensus 189 G~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l 268 (287)
T cd07840 189 GCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLL 268 (287)
T ss_pred HHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHc
Confidence 999999997 6655443322222211110000 00111 2668889999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 001059 645 SPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~ 663 (1170)
+.+|.+||++.++++|+||
T Consensus 269 ~~~P~~Rp~~~~~l~~~~~ 287 (287)
T cd07840 269 TLDPKKRISADQALQHEYF 287 (287)
T ss_pred CCChhhCcCHHHHhhCcCC
Confidence 9999999999999999996
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po |
| >cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=328.01 Aligned_cols=256 Identities=26% Similarity=0.368 Sum_probs=200.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|+..+.||+|+||.||++.+..+|+.||+|.+...... .....+.+|+.++.++. ||||+++++++..
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~-------- 74 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE-KEQKRLLMDLDVVMRSSDCPYIVKFYGALFR-------- 74 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh-HHHHHHHHHHHHHHHhcCCCCEeeeeeEEec--------
Confidence 5777888999999999999999999999999998754433 34567889999999996 9999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+++|||++.++.++.. ....+++..+..++.|++.||+|
T Consensus 75 --------------------------------~~~~~~~~e~~~~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~ 122 (288)
T cd06616 75 --------------------------------EGDCWICMELMDISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNY 122 (288)
T ss_pred --------------------------------CCcEEEEEecccCCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 34568999999877655432 23569999999999999999999
Q ss_pred HHhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CC
Q 001059 509 IHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PK 585 (1170)
Q Consensus 509 LHs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~ 585 (1170)
||+. +++||||||+|||++.++.+||+|||++..+.... ......|++.|+|||++.+. ..
T Consensus 123 lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~ 186 (288)
T cd06616 123 LKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSI----------------AKTRDAGCRPYMAPERIDPSARDG 186 (288)
T ss_pred HhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCC----------------ccccccCccCccCHHHhccccccC
Confidence 9975 99999999999999999999999999997653211 11234688999999999874 36
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHH-HHHHHHhhhc-CCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQK-GELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~l~~~-~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++.++|||||||++|+|++ ||...... +......... ..++ ......++++.+||.+||+.||++|||++++++
T Consensus 187 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~ 266 (288)
T cd06616 187 YDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLE 266 (288)
T ss_pred CcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 8999999999999999997 66544321 1111111111 1111 122346778999999999999999999999999
Q ss_pred ccCCCCch
Q 001059 660 DALPPQME 667 (1170)
Q Consensus 660 ~~~~~~~~ 667 (1170)
|+|+....
T Consensus 267 ~~~~~~~~ 274 (288)
T cd06616 267 HPFIKDYE 274 (288)
T ss_pred Chhhhchh
Confidence 99997654
|
Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates |
| >cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=335.87 Aligned_cols=266 Identities=26% Similarity=0.368 Sum_probs=208.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++.+.||.|+||.||+|.+..+|+.||+|++............+.+|+.+++++ +||||++++++|...
T Consensus 4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~---- 79 (337)
T cd07852 4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAE---- 79 (337)
T ss_pred hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccC----
Confidence 456789999999999999999999998999999998864433334445678899999999 999999999887321
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+...+|+||||++++|...+... .+++..++.++.||+.||+|||
T Consensus 80 ----------------------------------~~~~~~lv~e~~~~~L~~~~~~~-~~~~~~~~~i~~qi~~~L~~LH 124 (337)
T cd07852 80 ----------------------------------NDKDIYLVFEYMETDLHAVIRAN-ILEDVHKRYIMYQLLKALKYIH 124 (337)
T ss_pred ----------------------------------CCceEEEEecccccCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Confidence 23568999999999999888765 7899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++..+....... .........||+.|+|||++.+...++.++
T Consensus 125 ~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~----------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~s 194 (337)
T cd07852 125 SGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENP----------ENPVLTDYVATRWYRAPEILLGSTRYTKGV 194 (337)
T ss_pred HCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccc----------cCcchhcccccccccCceeeeccccccccc
Confidence 9999999999999999999999999999998653221100 001123357899999999887655688999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--------------------------C--CCCCccccCCHHHHHH
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--------------------------G--ELPPSWVAKFSEQESL 639 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--------------------------~--~~p~~~~~~~~e~~~L 639 (1170)
|||||||++|+|++ ||................ . .........+.++.++
T Consensus 195 Di~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 274 (337)
T cd07852 195 DMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDL 274 (337)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHH
Confidence 99999999999997 665433222211111100 0 0111222356788999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|.+||+.||.+|||+.++++|+|+.++
T Consensus 275 i~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 275 LKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHHhccCCcccccCHHHHhhChhhhhh
Confidence 999999999999999999999988775
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul |
| >cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=329.64 Aligned_cols=258 Identities=28% Similarity=0.442 Sum_probs=199.0
Q ss_pred CceEEeeeccCCcEEEEEEEEcc--CCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~--tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.|++.++||+|+||.||+|.++. +|+.||+|.+.... ........+.+|+.+++.++||||++++++|.+.
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------ 74 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEH------ 74 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCC------
Confidence 47889999999999999999998 89999999997533 1122345678899999999999999999987431
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-----CCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+||||++++|.+.+... ..+++..++.++.||+.||+
T Consensus 75 --------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~ 122 (316)
T cd07842 75 --------------------------------ADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVH 122 (316)
T ss_pred --------------------------------CCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHH
Confidence 23578999999998888776432 25899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecC----CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~----~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
|||+++|+||||||+|||++. ++.+||+|||+++....... .........+|+.|+|||++.+.
T Consensus 123 ~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~~ 190 (316)
T cd07842 123 YLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLK------------PLADLDPVVVTIWYRAPELLLGA 190 (316)
T ss_pred HHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcc------------cccccCCccccccccCHHHHhCC
Confidence 999999999999999999999 89999999999986532210 01122345789999999988775
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHH---------H---HHHHh-----------------------hhcCCC
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQ---------I---VLSDL-----------------------KQKGEL 625 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~---------~---~~~~l-----------------------~~~~~~ 625 (1170)
..++.++|||||||++|+|++ ||....... . ....+ ......
T Consensus 191 ~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (316)
T cd07842 191 RHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTY 270 (316)
T ss_pred CCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHHHHHhhcccchhhhhhccCCCC
Confidence 568999999999999999997 664322111 0 00000 000001
Q ss_pred CC--------ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 626 PP--------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 626 p~--------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+. .+...++++.++|.+||+.||.+|||+.++++||||
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f 316 (316)
T cd07842 271 PSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF 316 (316)
T ss_pred CCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence 10 001345678899999999999999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the |
| >cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=334.83 Aligned_cols=261 Identities=26% Similarity=0.427 Sum_probs=205.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+..+|+.||+|++............+.+|+.++++++||||+++++++....
T Consensus 16 ~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~------ 89 (345)
T cd07877 16 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR------ 89 (345)
T ss_pred cCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc------
Confidence 37899999999999999999999989999999998754434334567889999999999999999998774321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
........|+++++++++|.+++.. ..+++..++.++.||+.||+|||++|
T Consensus 90 ----------------------------~~~~~~~~~lv~~~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~ 140 (345)
T cd07877 90 ----------------------------SLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD 140 (345)
T ss_pred ----------------------------cccccccEEEEehhcccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 0012345789999998899887754 46999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+||+++.++.+||+|||+++.... ......||+.|+|||++.+...++.++|||
T Consensus 141 ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dvw 202 (345)
T cd07877 141 IIHRDLKPSNLAVNEDCELKILDFGLARHTDD------------------EMTGYVATRWYRAPEIMLNWMHYNQTVDIW 202 (345)
T ss_pred eeecCCChHHEEEcCCCCEEEecccccccccc------------------cccccccCCCccCHHHHhCccCCCchhhHH
Confidence 99999999999999999999999999875321 112346889999999987655688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-----------------------CCC-----CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------------ELP-----PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-----------------------~~p-----~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||................. ..+ ..+...++++.++|.+
T Consensus 203 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (345)
T cd07877 203 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 282 (345)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHH
Confidence 99999999996 6643332222111111000 011 0112346788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+||++.++++|+||.+..
T Consensus 283 ~L~~dp~~R~t~~e~l~h~~f~~~~ 307 (345)
T cd07877 283 MLVLDSDKRITAAQALAHAYFAQYH 307 (345)
T ss_pred HcCCChhhcCCHHHHhcChhhhhcC
Confidence 9999999999999999999998754
|
Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14 |
| >cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=320.64 Aligned_cols=257 Identities=23% Similarity=0.399 Sum_probs=202.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+|+..+.||+|+||.||+|.+..+|+.||+|+++..... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------- 73 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATC------- 73 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceec-------
Confidence 477789999999999999999999999999999754321 123467899999999999999999998873
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+...++++|||++ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 74 ---------------------------------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH 120 (268)
T cd06630 74 ---------------------------------EDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLH 120 (268)
T ss_pred ---------------------------------cCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2456899999997 489999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
++|++||||||+||+++.++ .+||+|||++.......... ........||..|+|||.+.+ ..++.+
T Consensus 121 ~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~PE~~~~-~~~~~~ 188 (268)
T cd06630 121 ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGA-----------GEFQGQLLGTIAFMAPEVLRG-EQYGRS 188 (268)
T ss_pred hCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccC-----------CccccccccccceeCHhHhcc-CCCCcc
Confidence 99999999999999998776 59999999998764221000 001123468999999999877 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHH--HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMER--QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~--~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
+|+||+||++|+|++ ||...... .............+......++++.+++.+||..+|.+||++.++++|+||.
T Consensus 189 ~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~ 268 (268)
T cd06630 189 CDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268 (268)
T ss_pred cchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence 999999999999997 66432211 1111111111222333334567899999999999999999999999999974
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their |
| >cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=327.42 Aligned_cols=253 Identities=26% Similarity=0.409 Sum_probs=203.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|+..+.||+|+||+||+|.+..+|+.||+|++..... .......+.+|+.+++.++||||++++++|..
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~-------- 86 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLR-------- 86 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEe--------
Confidence 458889999999999999999998999999999875433 33344678899999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|+||||+++++.+.+.. ...+++..+..++.||+.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~ 134 (307)
T cd06607 87 --------------------------------EHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAICHGALQGLAYLHSH 134 (307)
T ss_pred --------------------------------CCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999999998887764 45699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
||+||||+|+||+++.++.+||+|||++..... .....|++.|+|||++.+ ...++.++
T Consensus 135 ~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~s 195 (307)
T cd06607 135 ERIHRDIKAGNILLTEPGTVKLADFGSASLVSP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 195 (307)
T ss_pred CceecCCCcccEEECCCCCEEEeecCcceecCC-------------------CCCccCCccccCceeeeccCCCCCCccc
Confidence 999999999999999999999999999875321 123468889999998752 24588999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||||+++|||++ ||.............. ...........+..+.++|.+||+.||.+||++.++++|+|+....
T Consensus 196 Dv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 274 (307)
T cd06607 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NDSPTLSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER 274 (307)
T ss_pred chHHHHHHHHHHHcCCCCCCCccHHHHHHHHhc-CCCCCCCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence 99999999999997 6654433333222221 1111111223456889999999999999999999999999987653
|
Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily |
| >cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=319.65 Aligned_cols=243 Identities=22% Similarity=0.316 Sum_probs=194.6
Q ss_pred eeccCCcEEEEEEEE--ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 362 PLGHGGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~--~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
+||+|+||.||+|.+ +.++..+|+|+++.........+.+.+|+.+++.++||||+++++++.
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~--------------- 66 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE--------------- 66 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc---------------
Confidence 689999999999975 456889999998765555555678999999999999999999998751
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....+++|||++ ++|.+++.....+++..+..++.|++.||+|||++||+|||
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~d 120 (257)
T cd05116 67 --------------------------AESWMLVMELAELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRD 120 (257)
T ss_pred --------------------------CCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecc
Confidence 234589999997 58999998877899999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||++........ .........+++.|+|||.+.+ ..++.++|||||||+
T Consensus 121 lkp~nill~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~ 187 (257)
T cd05116 121 LAARNVLLVTQHYAKISDFGLSKALGADEN------------YYKAKTHGKWPVKWYAPECMNY-YKFSSKSDVWSFGVL 187 (257)
T ss_pred cchhhEEEcCCCeEEECCCccccccCCCCC------------eeeecCCCCCCccccCHhHhcc-CCcCchhHHHHHHHH
Confidence 999999999999999999999986532110 0001122345689999999876 568899999999999
Q ss_pred HHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 599 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 599 L~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||++ ||......+.... +. .+..++.....++++.++|.+||+.||.+||++.+|.+.
T Consensus 188 l~el~t~g~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~ 251 (257)
T cd05116 188 MWEAFSYGQKPYKGMKGNEVTQM-IE-SGERMECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELR 251 (257)
T ss_pred HHHHHhCCCCCCCCCCHHHHHHH-HH-CCCCCCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHH
Confidence 999985 7765544433332 22 223333344577899999999999999999999999753
|
Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio |
| >cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-34 Score=335.26 Aligned_cols=260 Identities=27% Similarity=0.415 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.+.+.||+|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||+++++++.....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~----- 88 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS----- 88 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheeccccc-----
Confidence 368999999999999999999999899999999987544333344568899999999999999999988743210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......+|++|||+..+|..++. ..+++..++.++.||+.||+|||++|
T Consensus 89 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ 137 (342)
T cd07879 89 -----------------------------GDEFQDFYLVMPYMQTDLQKIMG--HPLSEDKVQYLVYQMLCGLKYIHSAG 137 (342)
T ss_pred -----------------------------CCCCceEEEEecccccCHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 01234579999999888777653 46899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||||+|||++.++.+||+|||+++.... ......+|+.|+|||++.+...++.++|||
T Consensus 138 i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 199 (342)
T cd07879 138 IIHRDLKPGNLAVNEDCELKILDFGLARHADA------------------EMTGYVVTRWYRAPEVILNWMHYNQTVDIW 199 (342)
T ss_pred cccCCCCHHHEEECCCCCEEEeeCCCCcCCCC------------------CCCCceeeecccChhhhcCccccCchHHHH
Confidence 99999999999999999999999999875311 113457889999999987645688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhc-----------------------CCCC-----CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQK-----------------------GELP-----PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~-----------------------~~~p-----~~~~~~~~e~~~LI~~ 642 (1170)
||||++|||++ ||...........++... ...+ ..++..++++.+||.+
T Consensus 200 slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 279 (342)
T cd07879 200 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEK 279 (342)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHH
Confidence 99999999997 776543332222211100 0001 1122455678999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+||++.++++|+||....
T Consensus 280 ~l~~dP~~R~~~~e~l~h~~f~~~~ 304 (342)
T cd07879 280 MLELDVDKRLTATEALEHPYFDSFR 304 (342)
T ss_pred HcCCChhhCcCHHHHhcCcchhhcc
Confidence 9999999999999999999997764
|
Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13 |
| >cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=317.64 Aligned_cols=245 Identities=22% Similarity=0.373 Sum_probs=196.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||++.++ ++..+|+|.+...... ...+.+|+.+|+.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~a~K~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWR-AQIKVAIKAINEGAMS---EEDFIEEAKVMMKLSHPKLVQLYGVCTQ--------- 70 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEec-cCceEEEEecccCCcc---HHHHHHHHHHHHHCCCCCceeEEEEEcc---------
Confidence 57999999999999999999986 5668999987643322 3578899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05114 71 -------------------------------QKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERN 119 (256)
T ss_pred -------------------------------CCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999997 6899888653 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++||
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di 184 (256)
T cd05114 120 SFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY--------------TSSSGAKFPVKWSPPEVFNF-SKYSSKSDV 184 (256)
T ss_pred CccccccCcceEEEcCCCeEEECCCCCccccCCCce--------------eccCCCCCchhhCChhhccc-Cccchhhhh
Confidence 999999999999999999999999999986422110 01122346678999999887 568999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||+++|||++ ||......+........ ..+......++++.+++.+||+.+|.+||++.++++.
T Consensus 185 ~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~--~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~ 254 (256)
T cd05114 185 WSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRG--FRLYRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRA 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 999999999997 67665554444443322 2222223345689999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h |
| >cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-34 Score=325.43 Aligned_cols=253 Identities=26% Similarity=0.389 Sum_probs=205.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|.+..+|+.||+|++.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 74 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGA-KSSVRKQILRELQIMHECRSPYIVSFYGAFLN-------- 74 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecC-cchHHHHHHHHHHHHHHcCCCCcceEeeeEec--------
Confidence 368899999999999999999999999999999987543 23446788999999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG- 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs- 511 (1170)
...+|+||||++ ++|.+++...+.+++..+..++.|++.||.|||+
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~ 122 (284)
T cd06620 75 --------------------------------ENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNV 122 (284)
T ss_pred --------------------------------CCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 357899999997 5888888887889999999999999999999997
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
.+++||||||+||+++.++.++|+|||++....... ....+|+..|+|||++.+ ..++.++|
T Consensus 123 ~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~-----------------~~~~~~~~~~~aPE~~~~-~~~~~~~D 184 (284)
T cd06620 123 HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI-----------------ADTFVGTSTYMSPERIQG-GKYTVKSD 184 (284)
T ss_pred cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-----------------cCccccCcccCCHHHHcc-CCCCccch
Confidence 689999999999999999999999999986542110 123478999999999876 46889999
Q ss_pred hHHHHHHHHHhhc---CCCchhHH-----------HHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMER-----------QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~-----------~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
||||||++|+|++ ||...... ........ ...+. .....++++.+||.+||+.||.+|||+.+
T Consensus 185 i~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e 262 (284)
T cd06620 185 VWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQ--EPPPRLPSSDFPEDLRDFVDACLLKDPTERPTPQQ 262 (284)
T ss_pred HHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhh--ccCCCCCchhcCHHHHHHHHHHhcCCcccCcCHHH
Confidence 9999999999996 77543321 11111111 11111 11225678999999999999999999999
Q ss_pred HHhccCCCCch
Q 001059 657 LLQDALPPQME 667 (1170)
Q Consensus 657 iL~~~~~~~~~ 667 (1170)
+++|+|+.+..
T Consensus 263 ~~~~~~~~~~~ 273 (284)
T cd06620 263 LCAMPPFIQAL 273 (284)
T ss_pred HhcCccccccc
Confidence 99999886653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-34 Score=326.39 Aligned_cols=268 Identities=26% Similarity=0.415 Sum_probs=206.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+..++|++.+.||.|+||.||+|.++.+|+.||+|.++...........+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~--- 80 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQD--- 80 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcch---
Confidence 34678999999999999999999999999999999997654433344567889999999999999999988744210
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
. .........+|++|||+++++...+... ..+++..++.++.||+.||+|||
T Consensus 81 ---~------------------------~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH 133 (302)
T cd07864 81 ---A------------------------LDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH 133 (302)
T ss_pred ---h------------------------hhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0 0001123478999999999888877654 46999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+||++++++.+||+|||++........ .......+++.|+|||.+.+...++.++
T Consensus 134 ~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~~~~~~~~~ 199 (302)
T cd07864 134 KKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEES--------------RPYTNKVITLWYRPPELLLGEERYGPAI 199 (302)
T ss_pred hCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcc--------------cccccceeccCccChHHhcCCCCCCchh
Confidence 99999999999999999999999999999986532210 0112235688999999887645578999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-CC--------------------------CccccCCHHHHHHH
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-LP--------------------------PSWVAKFSEQESLL 640 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-~p--------------------------~~~~~~~~e~~~LI 640 (1170)
|||||||++|||++ ||................+. .+ ..+...++.+.++|
T Consensus 200 Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 279 (302)
T cd07864 200 DVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLL 279 (302)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHH
Confidence 99999999999997 56544333222221111111 00 01223467889999
Q ss_pred HHccCCCCCCCCCHHHHHhccCC
Q 001059 641 RRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.+||+.||.+||++.+++.|+|+
T Consensus 280 ~~~l~~~P~~Rp~~~~il~~~~~ 302 (302)
T cd07864 280 DHMLTLDPSKRCTAEEALNSPWL 302 (302)
T ss_pred HHHccCChhhCCCHHHHhcCCCC
Confidence 99999999999999999999986
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely |
| >PHA03210 serine/threonine kinase US3; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=352.96 Aligned_cols=266 Identities=23% Similarity=0.344 Sum_probs=194.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEe---------------cCCCChhhHHHHHHHHHHHHhccCC
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIR---------------LKDKSLPVNDRILREVATLSRLQHQ 414 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg-~~vAVK~i~---------------~~~~~~~~~~~~~~Ev~iL~~l~Hp 414 (1170)
..+.++|++++.||+|+||+||+|.++... ..+++|.+. ...........+.+|+.+|+.++||
T Consensus 144 ~~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hp 223 (501)
T PHA03210 144 DEFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHE 223 (501)
T ss_pred hhhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCC
Confidence 446789999999999999999999875432 222222111 0011222345688999999999999
Q ss_pred CceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-----CC
Q 001059 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-----DH 489 (1170)
Q Consensus 415 nIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-----~~ 489 (1170)
|||++++++.. ....|++|+++.++|...+... ..
T Consensus 224 nIv~l~~~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~ 263 (501)
T PHA03210 224 NILKIEEILRS----------------------------------------EANTYMITQKYDFDLYSFMYDEAFDWKDR 263 (501)
T ss_pred CcCcEeEEEEE----------------------------------------CCeeEEEEeccccCHHHHHhhcccccccc
Confidence 99999988733 3467999999998888876432 22
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
.....++.++.||+.||+|||++|||||||||+|||++.++.+||+|||+++.+..... ......+
T Consensus 264 ~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~--------------~~~~~~~ 329 (501)
T PHA03210 264 PLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKERE--------------AFDYGWV 329 (501)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccc--------------ccccccc
Confidence 44667889999999999999999999999999999999999999999999986532110 0123457
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCch--hHHHHHHHHhhhcC----CCC-------------
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTA--MERQIVLSDLKQKG----ELP------------- 626 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~--~~~~~~~~~l~~~~----~~p------------- 626 (1170)
||+.|+|||++.+ ..++.++|||||||++|||++ |+... .........+.... .+|
T Consensus 330 gt~~y~aPE~~~~-~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~ 408 (501)
T PHA03210 330 GTVATNSPEILAG-DGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDEEFPDPPCKLFDYIDSA 408 (501)
T ss_pred CCcCCCCchhhcC-CCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChhhcCCcHHHHHHHhhhh
Confidence 9999999999987 568999999999999999996 44321 11122222111100 000
Q ss_pred ----------Ccc--ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHHH
Q 001059 627 ----------PSW--VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELL 671 (1170)
Q Consensus 627 ----------~~~--~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~~ 671 (1170)
+.. ...+.++.++|.+||+.||.+|||+.|+|+||||.....+.+
T Consensus 409 ~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~~~~~ 465 (501)
T PHA03210 409 EIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEEEEEI 465 (501)
T ss_pred hcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCCchHH
Confidence 000 113346678899999999999999999999999987764443
|
|
| >cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=317.34 Aligned_cols=254 Identities=30% Similarity=0.479 Sum_probs=209.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||.|++|.||+|.+..+|+.||||++...... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE-EFRKQLLRELKTLRSCESPYVVKCYGAFYK--------- 70 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEcc---------
Confidence 4789999999999999999999999999999998765432 446789999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-C
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-Q 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-~ 512 (1170)
...+|++|||++ ++|.+++.....+++..++.++.|++.||+|||+ +
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~ 119 (264)
T cd06623 71 -------------------------------EGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKR 119 (264)
T ss_pred -------------------------------CCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccC
Confidence 357899999998 6999999887889999999999999999999999 9
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||+|+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++|+
T Consensus 120 ~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~---------------~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv 183 (264)
T cd06623 120 HIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD---------------QCNTFVGTVTYMSPERIQG-ESYSYAADI 183 (264)
T ss_pred CCccCCCCHHHEEECCCCCEEEccCccceecccCCC---------------cccceeecccccCHhhhCC-CCCCchhhH
Confidence 999999999999999999999999999986532110 0123468899999999887 568999999
Q ss_pred HHHHHHHHHhhc---CCCchh--HHHHHHHHhhhcCCCCCcccc-CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 593 YSLGIVFFELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVA-KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~--~~~~~~~~l~~~~~~p~~~~~-~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||+++|+|++ ||.... ........+. ....+..... .+..+.++|.+||..+|++||++.++++|+|+++.
T Consensus 184 ~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~ 262 (264)
T cd06623 184 WSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-DGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA 262 (264)
T ss_pred HHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-cCCCCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence 999999999997 665543 2222222222 2222332333 56789999999999999999999999999998653
|
Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of |
| >KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-35 Score=291.29 Aligned_cols=257 Identities=26% Similarity=0.503 Sum_probs=208.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|...++||+|.||+||+|+++.+++.||+|.++..+.+...-...+||+-+|+.++|.|||++++...
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlh---------- 71 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLH---------- 71 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhc----------
Confidence 4577788999999999999999999999999999988777667778999999999999999999997641
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+-+|+|||+.+|..+..+. +.++.+.++.++.|+++||.|+|+++
T Consensus 72 ------------------------------sdkkltlvfe~cdqdlkkyfdslng~~d~~~~rsfmlqllrgl~fchshn 121 (292)
T KOG0662|consen 72 ------------------------------SDKKLTLVFEFCDQDLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHN 121 (292)
T ss_pred ------------------------------cCceeEEeHHHhhHHHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhh
Confidence 24678899999999999988764 56999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
+.||||||.|.||+.+|.+||+|||+|+.+..+- ...+..+-|.+|.+|.++-|..-|+...|||
T Consensus 122 vlhrdlkpqnllin~ngelkladfglarafgipv---------------rcysaevvtlwyrppdvlfgakly~tsidmw 186 (292)
T KOG0662|consen 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMW 186 (292)
T ss_pred hhhccCCcceEEeccCCcEEecccchhhhcCCce---------------EeeeceeeeeeccCcceeeeeehhccchHhh
Confidence 9999999999999999999999999999764321 1123457899999999999977799999999
Q ss_pred HHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCC----------------------CccccCCH----HHHHHHHHc
Q 001059 594 SLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELP----------------------PSWVAKFS----EQESLLRRL 643 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p----------------------~~~~~~~~----e~~~LI~~~ 643 (1170)
|.|||+.|+.. |..+..+ .....++...-+... ..|..+.| .-++|++++
T Consensus 187 sagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkl 266 (292)
T KOG0662|consen 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKL 266 (292)
T ss_pred hcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHH
Confidence 99999999984 5444333 333333333222111 01222222 236999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 001059 644 MSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|..+|.+|.+++..+|||+|...
T Consensus 267 l~cnp~qrisaeaalqhpyf~d~ 289 (292)
T KOG0662|consen 267 LKCNPAQRISAEAALQHPYFSDF 289 (292)
T ss_pred hccCcccccCHHHHhcCcccccc
Confidence 99999999999999999988654
|
|
| >cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=317.04 Aligned_cols=255 Identities=25% Similarity=0.442 Sum_probs=205.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC---ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+|++.+.||+|+||.||+|.++.+|+.||+|.+..... .......+.+|+.+++.++||||+++++++.+.
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~----- 76 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDP----- 76 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcC-----
Confidence 479999999999999999999999999999999864321 223446788999999999999999999887432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....++++|||++ ++|.+.+.....+++..++.++.||+.||.|||
T Consensus 77 ---------------------------------~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH 123 (264)
T cd06653 77 ---------------------------------EEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLH 123 (264)
T ss_pred ---------------------------------CCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2356889999997 589999988778999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||||+||+++.++.++|+|||+++........ ....+...|+..|+|||.+.+ ..++.++
T Consensus 124 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 190 (264)
T cd06653 124 SNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMS------------GTGIKSVTGTPYWMSPEVISG-EGYGRKA 190 (264)
T ss_pred hCCEecCCCCHHHEEEcCCCCEEECcccccccccccccc------------CccccccCCcccccCHhhhcC-CCCCccc
Confidence 999999999999999999999999999999865321100 001133568999999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|+|||||++|+|++ ||.............. ....+..+...++++.++|.+||. +|..||++.+++.|||
T Consensus 191 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~ 263 (264)
T cd06653 191 DVWSVACTVVEMLTEKPPWAEYEAMAAIFKIAT-QPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLRHPF 263 (264)
T ss_pred cHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHc-CCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhcCCC
Confidence 99999999999996 7765544444433332 222233344566789999999999 5799999999999997
|
Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho |
| >cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-34 Score=335.42 Aligned_cols=251 Identities=24% Similarity=0.347 Sum_probs=196.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
++|++.+.||.|+||.||+|.+.. +++.||+|+++... .......+.+|+.+++++ +||||++++++|...
T Consensus 7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~-- 83 (337)
T cd05054 7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA-TASEYKALMTELKILIHIGHHLNVVNLLGACTKP-- 83 (337)
T ss_pred HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC-CHHHHHHHHHHHHHHHhhccCcchhheeeeEecC--
Confidence 478999999999999999997543 45789999987433 233446788999999999 899999999887432
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 487 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 487 (1170)
...++++|||++ ++|.+++...
T Consensus 84 -------------------------------------~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (337)
T cd05054 84 -------------------------------------GGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQK 126 (337)
T ss_pred -------------------------------------CCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccc
Confidence 346789999997 5888877532
Q ss_pred -----------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceee
Q 001059 488 -----------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526 (1170)
Q Consensus 488 -----------------------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi 526 (1170)
..+++..+..++.||+.||+|||++||+||||||+|||+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill 206 (337)
T cd05054 127 EGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILL 206 (337)
T ss_pred cccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEE
Confidence 257889999999999999999999999999999999999
Q ss_pred cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc--
Q 001059 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-- 604 (1170)
Q Consensus 527 ~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-- 604 (1170)
+.++.+||+|||+++.+.... .........++..|+|||++.+ ..++.++|||||||++|||++
T Consensus 207 ~~~~~vkL~DfG~a~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~SlGv~l~el~t~g 272 (337)
T cd05054 207 SENNVVKICDFGLARDIYKDP-------------DYVRKGDARLPLKWMAPESIFD-KVYTTQSDVWSFGVLLWEIFSLG 272 (337)
T ss_pred eCCCcEEEeccccchhcccCc-------------chhhccCCCCCccccCcHHhcC-CCCCccccHHHHHHHHHHHHHcC
Confidence 999999999999998653211 0111233456788999999887 568999999999999999985
Q ss_pred --CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 605 --PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 605 --Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||......+.....+. .+..+......++++.+++.+||+.+|++||++.+++++
T Consensus 273 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~cl~~~p~~RPs~~ell~~ 329 (337)
T cd05054 273 ASPYPGVQIDEEFCRRLK-EGTRMRAPEYATPEIYSIMLDCWHNNPEDRPTFSELVEI 329 (337)
T ss_pred CCCCCCCCccHHHHHHHh-ccCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 6654333233222222 222222333556789999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto |
| >cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=319.38 Aligned_cols=250 Identities=28% Similarity=0.376 Sum_probs=195.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
+.....||+|+||.||+|.+..++..||+|.+.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 10 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----------- 76 (268)
T cd06624 10 NGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD--SRYVQPLHEEIALHSYLKHRNIVQYLGSDSE----------- 76 (268)
T ss_pred CCceEEEecCCceEEEEeEecCCCcEEEEEEecCCC--HHHHHHHHHHHHHHHhcCCCCeeeeeeeecc-----------
Confidence 334468999999999999999899999999886433 2345678999999999999999999988732
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCC--CHHHHHHHHHHHHHHHHHHHhC
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHF--DKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l--~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++++|||++ ++|.+++... ..+ ++..+..++.||+.||+|||++
T Consensus 77 -----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 127 (268)
T cd06624 77 -----------------------------NGFFKIFMEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDN 127 (268)
T ss_pred -----------------------------CCEEEEEEecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999997 5999988754 445 8888999999999999999999
Q ss_pred CccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccc
Q 001059 513 GIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ks 590 (1170)
||+||||||+||+++. ++.+||+|||++....... .......|++.|+|||++.+. ..++.++
T Consensus 128 ~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~~ 192 (268)
T cd06624 128 QIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGIN---------------PCTETFTGTLQYMAPEVIDKGPRGYGAPA 192 (268)
T ss_pred CEeecCCCHHHEEEcCCCCeEEEecchhheecccCC---------------CccccCCCCccccChhhhccccccCCchh
Confidence 9999999999999986 6799999999987542111 011234588999999998653 2478999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||||||+++|+|++ ||...................+......++++.+++++||+.+|.+|||+.+++.|||+
T Consensus 193 Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~ 268 (268)
T cd06624 193 DIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFKIHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268 (268)
T ss_pred hhHHHHHHHHHHHhCCCCCccccChhhhHhhhhhhccCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence 99999999999997 66543222211111111122222333456789999999999999999999999999996
|
Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina |
| >PRK13184 pknD serine/threonine-protein kinase; Reviewed | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-34 Score=358.22 Aligned_cols=266 Identities=25% Similarity=0.393 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++|++.++||+|+||.||+|++..+|+.||||+++.... ......++.+|+.+++.++||||+++++++.+
T Consensus 1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d------- 73 (932)
T PRK13184 1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSD------- 73 (932)
T ss_pred CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEee-------
Confidence 3689999999999999999999999999999999975432 23345679999999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-----------CCCCHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------DHFDKELAWHLFR 500 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------~~l~e~~~~~i~~ 500 (1170)
....|++||||+ ++|.+++... ..++...++.++.
T Consensus 74 ---------------------------------~~~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~ 120 (932)
T PRK13184 74 ---------------------------------GDPVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFH 120 (932)
T ss_pred ---------------------------------CCEEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHH
Confidence 356899999997 5898887631 2355677889999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccC-CCCCCC--CCCccccCcccccCccCCCc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-AAFPTD--TGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~~GT~~Y~AP 577 (1170)
||+.||+|||++||+||||||+|||++.++.+||+|||+++.......... ...... ...........+||+.||||
T Consensus 121 QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAP 200 (932)
T PRK13184 121 KICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAP 200 (932)
T ss_pred HHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCH
Confidence 999999999999999999999999999999999999999987622110000 000000 00000011235799999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
|++.+ ..++.++|||||||++|||++ ||..........................++.+.+++.+||+.||++||+.
T Consensus 201 E~l~g-~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ki~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss 279 (932)
T PRK13184 201 ERLLG-VPASESTDIYALGVILYQMLTLSFPYRRKKGRKISYRDVILSPIEVAPYREIPPFLSQIAMKALAVDPAERYSS 279 (932)
T ss_pred HHhcC-CCCCcHhHHHHHHHHHHHHHHCCCCCCCcchhhhhhhhhccChhhccccccCCHHHHHHHHHHccCChhhCcCH
Confidence 99987 568999999999999999997 77654433322221111111111234567789999999999999999876
Q ss_pred HHHHhc
Q 001059 655 TELLQD 660 (1170)
Q Consensus 655 ~eiL~~ 660 (1170)
.+.+.+
T Consensus 280 ~eeLl~ 285 (932)
T PRK13184 280 VQELKQ 285 (932)
T ss_pred HHHHHH
Confidence 665543
|
|
| >cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-34 Score=330.58 Aligned_cols=264 Identities=25% Similarity=0.318 Sum_probs=204.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccC--CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLD--GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~t--g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|++.+.||+|+||.||+|.+..+ +..||||++............+.+|+.+++++ +||||+++++.+....
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~----- 75 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFP----- 75 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeecc-----
Confidence 488999999999999999999888 89999999875433333456788999999999 5999999997653210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.....+|++|+|++++|.+++.....+++..++.++.||+.||+|||++
T Consensus 76 -------------------------------~~~~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 124 (332)
T cd07857 76 -------------------------------GNFNELYLYEELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSA 124 (332)
T ss_pred -------------------------------ccCCcEEEEEecccCCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 1134578999999999999998888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++.+...... .........||+.|+|||++.+...++.++||
T Consensus 125 givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di 193 (332)
T cd07857 125 NVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGE-----------NAGFMTEYVATRWYRAPEIMLSFQSYTKAIDV 193 (332)
T ss_pred CcccCCCCHHHeEEcCCCCEEeCcCCCceeccccccc-----------ccccccCcccCccccCcHHHhCCCCCCcHHHH
Confidence 9999999999999999999999999999865422110 00112345799999999988764568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhh-----------------------c-----CCCCCccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQ-----------------------K-----GELPPSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~-----------------------~-----~~~p~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||............+.. . ..++......++.+.+++.
T Consensus 194 ~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 273 (332)
T cd07857 194 WSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLE 273 (332)
T ss_pred HHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHH
Confidence 999999999996 66543322111111100 0 0011122234678999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCc
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+||+.||.+|||+.+++.|+|+...
T Consensus 274 ~~l~~~P~~R~t~~~ll~~~~~~~~ 298 (332)
T cd07857 274 KLLAFDPTKRISVEEALEHPYLAIW 298 (332)
T ss_pred HHccCCcccCCCHHHHhcChhhhhh
Confidence 9999999999999999999987543
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co |
| >cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=332.64 Aligned_cols=262 Identities=24% Similarity=0.387 Sum_probs=207.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||.||+|.+..+|..||||++............+.+|+.+|+.++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 87 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDL----- 87 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCc-----
Confidence 357899999999999999999999999999999998654433344567889999999999999999998873221
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+||+|++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 88 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~~-~~l~~~~~~~i~~qi~~al~~LH~~ 137 (343)
T cd07880 88 -----------------------------SLDRFHDFYLVMPFMGTDLGKLMKH-EKLSEDRIQFLVYQMLKGLKYIHAA 137 (343)
T ss_pred -----------------------------cccccceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0011245799999998888887764 5699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+||+++.++.+||+|||++...... .....+++.|+|||.+.+...++.++|+
T Consensus 138 gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di 199 (343)
T cd07880 138 GIIHRDLKPGNLAVNEDCELKILDFGLARQTDSE------------------MTGYVVTRWYRAPEVILNWMHYTQTVDI 199 (343)
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccccccccC------------------ccccccCCcccCHHHHhCCCCCCcHHHH
Confidence 9999999999999999999999999998754211 1234678999999998764458899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC----------------------------CCccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------------PPSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------------p~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||................... .......++.+.++|.
T Consensus 200 ~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 279 (343)
T cd07880 200 WSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLE 279 (343)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHH
Confidence 999999999996 776543332222221111110 0112345667899999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++++|+||....
T Consensus 280 ~~l~~dP~~R~t~~~~l~~~~~~~~~ 305 (343)
T cd07880 280 KMLVLDAESRITAAEALAHPYFEEFH 305 (343)
T ss_pred HHcCCChhhCCCHHHHhcCccHhhhc
Confidence 99999999999999999999988763
|
Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12 |
| >cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-34 Score=316.73 Aligned_cols=250 Identities=33% Similarity=0.560 Sum_probs=203.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||+|.++.+|..||+|.+..........+.+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~---------- 70 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQE---------- 70 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheecc----------
Confidence 4889999999999999999999999999999997654433445678899999999999999999987632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+++||++ ++|.+++.... .+++..++.++.||+.||+|||++
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~ 120 (257)
T cd08225 71 ------------------------------NGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDR 120 (257)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356899999996 59999887543 479999999999999999999999
Q ss_pred CccccCCCCCceeecCCCC-EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 GIIHRDLTPNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~-vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+++|+||||+||+++.++. +||+|||.+........ ......|++.|+|||++.+ ..++.++|
T Consensus 121 ~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~ape~~~~-~~~~~~~D 184 (257)
T cd08225 121 KILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME---------------LAYTCVGTPYYLSPEICQN-RPYNNKTD 184 (257)
T ss_pred CcccccCCHHHEEEcCCCCeEEecccccchhccCCcc---------------cccccCCCccccCHHHHcC-CCCCchhh
Confidence 9999999999999998864 69999999986532110 0122368999999999877 46889999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+|||||++|||++ ||.............. ...++.....+.++.++|.+||..+|++|||+.++++|+|+
T Consensus 185 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~ 257 (257)
T cd08225 185 IWSLGCVLYELCTLKHPFEGNNLHQLVLKICQ--GYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILKRPFL 257 (257)
T ss_pred HHHHHHHHHHHHhCCCCCCCccHHHHHHHHhc--ccCCCCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence 9999999999996 7765544444433322 22333334556789999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. |
| >cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-34 Score=322.51 Aligned_cols=250 Identities=19% Similarity=0.291 Sum_probs=198.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
+++|++.+.||+|+||+||+|.+. .++..||+|.+.... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---- 78 (283)
T cd05090 4 LSAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN-NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQ---- 78 (283)
T ss_pred hhhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC-CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEec----
Confidence 468999999999999999999863 356789999987433 23344678899999999999999999988632
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-----------------CCCC
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-----------------DHFD 491 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-----------------~~l~ 491 (1170)
....|++|||++ ++|.+++... ..++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05090 79 ------------------------------------EQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLD 122 (283)
T ss_pred ------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccC
Confidence 345799999997 5899888532 2378
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+.++..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........++
T Consensus 123 ~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~ 189 (283)
T cd05090 123 HGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADY-------------YRVQPKSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcc-------------eecccCCCcc
Confidence 889999999999999999999999999999999999999999999999986532210 0112334567
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
..|+|||++.+ ..++.++|||||||++|||++ ||........ ...+. ....++.....++.+.+++.+||+.|
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05090 190 IRWMPPEAIMY-GKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEV-IEMVR-KRQLLPCSEDCPPRMYSLMTECWQEG 266 (283)
T ss_pred ceecChHHhcc-CCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHH-cCCcCCCCCCCCHHHHHHHHHHcccC
Confidence 88999999987 568999999999999999996 7765544333 23333 22333344556789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+||++.+|+++
T Consensus 267 p~~Rp~~~~i~~~ 279 (283)
T cd05090 267 PSRRPRFKDIHTR 279 (283)
T ss_pred cccCcCHHHHHHH
Confidence 9999999999875
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-35 Score=351.29 Aligned_cols=258 Identities=26% Similarity=0.466 Sum_probs=203.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+++.+.|.+|||+.||+|++...|..||+|.+-.. +....+.+.+||.+|+.|+ |||||.|++.....
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~--de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~------- 107 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN--DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAIN------- 107 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC--CHHHHHHHHHHHHHHHHhcCCCceeeEecccccc-------
Confidence 4678899999999999999999988899999988655 4456778999999999996 99999999742110
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.........++|.||||. |+|.+++.. ..+|++.++++|++|+++|+++||
T Consensus 108 --------------------------~~~~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH 161 (738)
T KOG1989|consen 108 --------------------------RSSNNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMH 161 (738)
T ss_pred --------------------------ccCCCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHh
Confidence 000111345789999998 699999974 356999999999999999999999
Q ss_pred hCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccc--cCcccccCccCCCcccccCC--C
Q 001059 511 GQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV--DGTGQVGTYFYTAPEIEQGW--P 584 (1170)
Q Consensus 511 s~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~GT~~Y~APE~l~~~--~ 584 (1170)
... |||||||-+||||+.+++.||||||.|+-.... +........ ..-....|+.|.|||.+.-+ .
T Consensus 162 ~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~--------~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~ 233 (738)
T KOG1989|consen 162 YLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILS--------PTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGL 233 (738)
T ss_pred cCCCccchhhhhhhheEEcCCCCEEeCcccccccccCC--------CccHHHHHHHHHHHHhhCCccccChHHHhhhcCC
Confidence 987 999999999999999999999999999843211 000000000 11123579999999975422 3
Q ss_pred CCCccchhHHHHHHHHHhh---cCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELl---tPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
..++|+|||+|||+||-|+ +||..... +.++..+..+|+. +.++..+++||+.||+.||.+||++.|++.+
T Consensus 234 pI~eKsDIWALGclLYkLCy~t~PFe~sg~----laIlng~Y~~P~~-p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~ 307 (738)
T KOG1989|consen 234 PIGEKSDIWALGCLLYKLCYFTTPFEESGK----LAILNGNYSFPPF-PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE 307 (738)
T ss_pred CCcchhHHHHHHHHHHHHHHhCCCcCcCcc----eeEEeccccCCCC-ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence 5899999999999999998 49976533 4455666777765 5677899999999999999999999999875
|
|
| >cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=329.59 Aligned_cols=254 Identities=24% Similarity=0.402 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|.....||.|+||.||++.+..++..||||.+.... ....+.+.+|+.+++.++||||+++++.+..
T Consensus 22 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~--------- 90 (292)
T cd06658 22 EYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK--QQRRELLFNEVVIMRDYHHENVVDMYNSYLV--------- 90 (292)
T ss_pred HHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch--HHHHHHHHHHHHHHHhCCCCcHHHHHHheec---------
Confidence 45566678999999999999999899999999986432 2345678899999999999999999877632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
..+.|++|||+++ +|.+++. ...+++..++.++.||+.||+|||++|
T Consensus 91 -------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~l~~~~~~~~~~qi~~~l~~LH~~~ 138 (292)
T cd06658 91 -------------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIATVCLSVLRALSYLHNQG 138 (292)
T ss_pred -------------------------------CCeEEEEEeCCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 3568999999975 7777764 456899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|||
T Consensus 139 ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 202 (292)
T cd06658 139 VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV---------------PKRKSLVGTPYWMAPEVISR-LPYGTEVDIW 202 (292)
T ss_pred EeecCCCHHHEEEcCCCCEEEccCcchhhccccc---------------ccCceeecCccccCHHHHcc-CCCCchhhHH
Confidence 9999999999999999999999999987542111 01133578999999999876 5688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||+++|||++ ||....................+.....+..+.++|.+||..||.+|||++++++|+||....
T Consensus 203 slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~ 279 (292)
T cd06658 203 SLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPRVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAG 279 (292)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCccccccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhhccC
Confidence 99999999997 776554433332222211222222334567899999999999999999999999999987553
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express |
| >KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-35 Score=315.96 Aligned_cols=272 Identities=26% Similarity=0.441 Sum_probs=219.0
Q ss_pred CCCccccCCceE-EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 348 LPSSRYLNDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 348 ~~~~~~~~~y~~-~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
..++.|.+-|.+ .+.||+|+|+.|--|....+|..||||+|.+... ....++.||++++.++ .|+||++++++|
T Consensus 70 s~~g~F~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~g--HsR~RvfREVe~f~~Cqgh~nilqLiefF-- 145 (463)
T KOG0607|consen 70 SLSGKFEDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPG--HSRSRVFREVETFYQCQGHKNILQLIEFF-- 145 (463)
T ss_pred cccchHHHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcCCc--hHHHHHHHHHHHHHHhcCCccHHHHHHHh--
Confidence 344556555665 3579999999999999999999999999975532 3456899999999999 599999999877
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~ 504 (1170)
++...+|+|||-+. |.|..++.++..|++.++.++..+|+.
T Consensus 146 --------------------------------------Edd~~FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~ 187 (463)
T KOG0607|consen 146 --------------------------------------EDDTRFYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIAS 187 (463)
T ss_pred --------------------------------------cccceEEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHH
Confidence 34678999999995 699999999999999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||.|||.+||.||||||+|||-.... -+|||||.+.........-. | .......+.+|+..|||||+..
T Consensus 188 aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~s----p----astP~L~tPvGSAEfMAPEVVd 259 (463)
T KOG0607|consen 188 ALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCS----P----ASTPELLTPVGSAEFMAPEVVD 259 (463)
T ss_pred HHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCC----C----CCCccccCcccchhhcchhHHh
Confidence 99999999999999999999987654 38999999987643222111 1 1122345678999999999753
Q ss_pred ---C-CCCCCccchhHHHHHHHHHhhc---CCCchhH---------------HHHHHHHhhhcCCCCC-ccccCCHHHHH
Q 001059 582 ---G-WPKIDEKADMYSLGIVFFELWH---PFSTAME---------------RQIVLSDLKQKGELPP-SWVAKFSEQES 638 (1170)
Q Consensus 582 ---~-~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~---------------~~~~~~~l~~~~~~p~-~~~~~~~e~~~ 638 (1170)
+ ...|+.++|.||||||||-|++ ||.+.-. ...+-.+...+..+|. .|..++.++++
T Consensus 260 ~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakd 339 (463)
T KOG0607|consen 260 VFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKD 339 (463)
T ss_pred hhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHH
Confidence 2 1359999999999999999996 6653211 2223344445666775 88899999999
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
+|+.+|..|+.+|.++.++++|||++....+
T Consensus 340 lisnLlvrda~~rlsa~~vlnhPw~~~~~~e 370 (463)
T KOG0607|consen 340 LISNLLVRDAKQRLSAAQVLNHPWVQRCAPE 370 (463)
T ss_pred HHHHHHhccHHhhhhhhhccCCccccccchh
Confidence 9999999999999999999999999987644
|
|
| >cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=319.16 Aligned_cols=248 Identities=29% Similarity=0.458 Sum_probs=202.1
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||.|+||.||+|.+..+++.||+|++..... .....+.+.+|+.+++.++||||+++++.+.+
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------------- 64 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKD---------------- 64 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEc----------------
Confidence 6999999999999998999999999975443 22345679999999999999999999987632
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
...+|++|||++ ++|.+++.+...+++..+..++.||+.||+|||++|++|+|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~ 120 (262)
T cd05572 65 ------------------------KKYIYMLMEYCLGGELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLK 120 (262)
T ss_pred ------------------------CCccEEEEecCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCC
Confidence 356799999996 5999999888789999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+||+++.++.+||+|||++....... ......|++.|+|||.+.+ ..++.++|+||||+++|
T Consensus 121 ~~nilv~~~~~~~l~df~~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~Di~slG~il~ 183 (262)
T cd05572 121 PENLLLDSNGYVKLVDFGFAKKLKSGQ----------------KTWTFCGTPEYVAPEIILN-KGYDFSVDYWSLGILLY 183 (262)
T ss_pred HHHEEEcCCCCEEEeeCCcccccCccc----------------ccccccCCcCccChhHhcC-CCCCChhhhhhhHHHHH
Confidence 999999999999999999998653211 1123468899999999876 56899999999999999
Q ss_pred Hhhc---CCCchh--HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCCCchH
Q 001059 601 ELWH---PFSTAM--ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 668 (1170)
Q Consensus 601 ELlt---Pf~~~~--~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~~~~~ 668 (1170)
+|++ ||.... .......... ....+......++++.++|.+||+.+|.+||+ ++++++||||....+
T Consensus 184 ~l~~g~~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~~ 260 (262)
T cd05572 184 ELLTGRPPFGEDDEDPMEIYNDILK-GNGKLEFPNYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGFDW 260 (262)
T ss_pred HHHhCCCCcCCCCCCHHHHHHHHhc-cCCCCCCCcccCHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCCCC
Confidence 9996 776554 3333333331 11122222233678999999999999999999 999999999987654
|
Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi |
| >KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-35 Score=333.99 Aligned_cols=291 Identities=24% Similarity=0.408 Sum_probs=221.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.-|..++.||-|+||+|.+++...|...||+|.+++.+.-. .....+.-|-.||...+.+.||++|..|
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySF---------- 698 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSF---------- 698 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEe----------
Confidence 45778999999999999999999999999999997655322 1234567788999999999999999777
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
++..++|+||+|++ |++..+|.+.+-|.|..|++|+.++..|+++.|..
T Consensus 699 ------------------------------QDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkm 748 (1034)
T KOG0608|consen 699 ------------------------------QDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKM 748 (1034)
T ss_pred ------------------------------ccCCceEEEEeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhc
Confidence 45788999999997 59999999999999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhcccc---ccccCCCCC-CC-----------------------CCCccccC
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFP-TD-----------------------TGGVSVDG 565 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~---~~~~~~~~~-~~-----------------------~~~~~~~~ 565 (1170)
|+|||||||+|||||.+|++||+|||+|+-+.-. .+.+....+ .+ .....+..
T Consensus 749 GFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~a 828 (1034)
T KOG0608|consen 749 GFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILA 828 (1034)
T ss_pred cceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhh
Confidence 9999999999999999999999999999754211 111100000 00 00111223
Q ss_pred cccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHH--HhhhcCCCCCccccCCHHHHHHH
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS--DLKQKGELPPSWVAKFSEQESLL 640 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~--~l~~~~~~p~~~~~~~~e~~~LI 640 (1170)
.+.+||+.|+|||++.. ..|+..||+||.|||||||+. ||....+.+...+ .++....++ ...+.++++.++|
T Consensus 829 hslvgt~nyiapevl~r-~g~~q~cdwws~gvil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~-~~~~ls~e~~~li 906 (1034)
T KOG0608|consen 829 HSLVGTPNYIAPEVLAR-TGYTQLCDWWSVGVILYEMLVGQPPFLADTPGETQYKVINWRNFLHIP-YQGNLSKEALDLI 906 (1034)
T ss_pred hhhcCCCcccChHHhcc-cCccccchhhHhhHHHHHHhhCCCCccCCCCCcceeeeeehhhccccc-cccccCHHHHHHH
Confidence 46689999999999987 569999999999999999994 8876554433322 222222233 3456678999999
Q ss_pred HHccCCCCCCCC---CHHHHHhccCCCCchHHHHHHH----HHhcCCCCCccchh
Q 001059 641 RRLMSPSPSDRP---SATELLQDALPPQMEYELLDNI----LRMMHSSEDTSIYD 688 (1170)
Q Consensus 641 ~~~L~~dP~~RP---ta~eiL~~~~~~~~~~~~~~~~----~~~~~~~~d~~~~~ 688 (1170)
.++.+ +++.|. .++++-.|+||+...+..+... ...+..+.|.+.++
T Consensus 907 ~kLc~-sad~RLGkng~d~vKaHpfFkgIDfsslRkq~ApYIP~ItHptDTSNFd 960 (1034)
T KOG0608|consen 907 QKLCC-SADSRLGKNGADQVKAHPFFKGIDFSSLRKQRAPYIPRITHPTDTSNFD 960 (1034)
T ss_pred HHHhc-ChhhhhcccchhhhhcCccccccchHhhhhccCCcCccccCCCccccCC
Confidence 87654 566776 5788999999999988776543 23344555665554
|
|
| >cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=322.53 Aligned_cols=248 Identities=27% Similarity=0.383 Sum_probs=192.2
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhh-HHHHHHHHHHHHh---ccCCCceeEEEEEeecCccccCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREVATLSR---LQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~-~~~~~~Ev~iL~~---l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
.||+|+||.||++.+..+|+.||+|.+......... ...+.+|..+++. .+||||+.+++.+..
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------ 68 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHT------------ 68 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEec------------
Confidence 489999999999999999999999998754332221 2234455544443 479999999887732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
...+|+||||++ ++|.+++...+.+++..+..++.||+.||+|||++||+|
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH 120 (279)
T cd05633 69 ----------------------------PDKLCFILDLMNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVY 120 (279)
T ss_pred ----------------------------CCeEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCC
Confidence 346799999997 589888888888999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+|||++.++.++|+|||++...... ......||+.|+|||.+.+...++.++||||||
T Consensus 121 ~dikp~Nil~~~~~~~~l~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG 183 (279)
T cd05633 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGTAYDSSADWFSLG 183 (279)
T ss_pred CCCCHHHEEECCCCCEEEccCCcceecccc-----------------CccCcCCCcCccCHHHhcCCCCCCchhhhHHHH
Confidence 999999999999999999999998753211 012346899999999986435588999999999
Q ss_pred HHHHHhhc---CCCchhH--HHHHHH-HhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCC
Q 001059 597 IVFFELWH---PFSTAME--RQIVLS-DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 665 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~--~~~~~~-~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~ 665 (1170)
|++|+|++ ||..... ...... ........ ....++++.++|++||..||.+|| ++.++++|+||..
T Consensus 184 ~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~ 260 (279)
T cd05633 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLTVNVEL---PDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKG 260 (279)
T ss_pred HHHHHHHhCCCCcCCCCCcCHHHHHHHhhcCCcCC---ccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccC
Confidence 99999997 7753321 111111 11111112 234567899999999999999999 6999999999998
Q ss_pred chHH
Q 001059 666 MEYE 669 (1170)
Q Consensus 666 ~~~~ 669 (1170)
..+.
T Consensus 261 ~~~~ 264 (279)
T cd05633 261 IDWQ 264 (279)
T ss_pred CCHh
Confidence 7643
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi |
| >cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=318.42 Aligned_cols=255 Identities=29% Similarity=0.486 Sum_probs=201.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--------hhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--------LPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~--------~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
+|.+.+.||.|+||.||+|.+..+|+.||+|.++..... ....+.+.+|+.+++.++||||+++++++..
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-- 79 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETT-- 79 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEecc--
Confidence 477889999999999999999989999999988643211 1123467889999999999999999987622
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+++||||++ ++|.+++...+.+++..+..++.||+.||
T Consensus 80 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l 121 (272)
T cd06629 80 --------------------------------------EEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGL 121 (272)
T ss_pred --------------------------------------CCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHH
Confidence 356799999996 58999998888899999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-C
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-K 585 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~ 585 (1170)
.|||++|++||||||+||+++.++.++|+|||+++...... . ........|+..|+|||.+.... .
T Consensus 122 ~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~--~-----------~~~~~~~~~~~~y~~PE~~~~~~~~ 188 (272)
T cd06629 122 AYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIY--D-----------NDQNMSMQGSVFWMAPEVIHSYSQG 188 (272)
T ss_pred HHHhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccc--c-----------ccccccccCCccccCHHHhccccCC
Confidence 99999999999999999999999999999999997532110 0 00123356889999999987633 4
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh--cCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~--~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++.++|+||||+++|+|++ ||......+........ ....+. .....+..+.++|.+||..+|.+|||++++++
T Consensus 189 ~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 189 YSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred CCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCccccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 7899999999999999997 66543333333222211 111222 22345678999999999999999999999999
Q ss_pred ccCC
Q 001059 660 DALP 663 (1170)
Q Consensus 660 ~~~~ 663 (1170)
|||+
T Consensus 269 ~~~~ 272 (272)
T cd06629 269 HPFI 272 (272)
T ss_pred CCCC
Confidence 9985
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte |
| >cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-34 Score=334.76 Aligned_cols=262 Identities=26% Similarity=0.422 Sum_probs=208.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|++..+++.||||++............+.+|+.+++.++||||+++++++....
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 87 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPAS----- 87 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccc-----
Confidence 457899999999999999999999999999999998754444444567889999999999999999887653210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+++||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 88 -----------------------------~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~ql~~aL~~LH~~ 137 (343)
T cd07851 88 -----------------------------SLEDFQDVYLVTHLMGADLNNIVKC-QKLSDDHIQFLVYQILRGLKYIHSA 137 (343)
T ss_pred -----------------------------cccccccEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0012345899999999999988865 5699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+||+++.++.+||+|||++...... .....+|+.|+|||.+.+...++.++||
T Consensus 138 gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Dv 199 (343)
T cd07851 138 GIIHRDLKPSNIAVNEDCELKILDFGLARHTDDE------------------MTGYVATRWYRAPEIMLNWMHYNQTVDI 199 (343)
T ss_pred CeecCCCCHHHeEECCCCCEEEcccccccccccc------------------ccCCcccccccCHHHHhCCCCCCchHhH
Confidence 9999999999999999999999999999754211 1334688999999998764467899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||...........+....+..+ ......++++.++|.
T Consensus 200 wslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~ 279 (343)
T cd07851 200 WSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLE 279 (343)
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHH
Confidence 999999999997 6654443333222221111100 111234678999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++++|||+.+..
T Consensus 280 ~~l~~~P~~Rpt~~ell~h~~~~~~~ 305 (343)
T cd07851 280 KMLVLDPDKRITAAEALAHPYLAEYH 305 (343)
T ss_pred HhCCCChhhCCCHHHHhcCCCccccC
Confidence 99999999999999999999998764
|
Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK |
| >cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=319.99 Aligned_cols=250 Identities=21% Similarity=0.286 Sum_probs=195.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|.++ .++..||||++... ........+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~--- 80 (277)
T cd05062 5 REKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 80 (277)
T ss_pred HHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 367999999999999999999875 23568999988533 233345678899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------CCCHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------HFDKELAWH 497 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~l~e~~~~~ 497 (1170)
....+++|||++ ++|.+++.... .++...+..
T Consensus 81 -------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05062 81 -------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQ 123 (277)
T ss_pred -------------------------------------CCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHH
Confidence 345799999997 58998886532 356788899
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
++.|++.||+|||++|++||||||+|||++.++.+||+|||+++........ .......+++.|+||
T Consensus 124 ~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05062 124 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMSP 190 (277)
T ss_pred HHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCccee-------------ecCCCCccCHhhcCh
Confidence 9999999999999999999999999999999999999999999754321110 011223567899999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|++.+ ..++.++|||||||++|||++ ||............. ....+......++.+.+++.+||+.||.+|||
T Consensus 191 E~~~~-~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 267 (277)
T cd05062 191 ESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVM--EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 267 (277)
T ss_pred hHhhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcC
Confidence 99987 568999999999999999986 665544433332222 22223333455678999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.+++++
T Consensus 268 ~~e~l~~ 274 (277)
T cd05062 268 FLEIISS 274 (277)
T ss_pred HHHHHHH
Confidence 9999875
|
Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh |
| >cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-34 Score=318.15 Aligned_cols=253 Identities=20% Similarity=0.267 Sum_probs=196.8
Q ss_pred eEEeeeccCCcEEEEEEEEccCCc--EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.+.+.||+|+||.||+|.+..++. .||+|.++....+......+.+|+.+++.++||||+++++.+.....
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~------- 74 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVE------- 74 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCc-------
Confidence 466889999999999999987765 69999987655555566788999999999999999999988743210
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh------cCCCCHHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES------YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~------~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.......+++|||++ ++|.+++.. ...+++..+..++.||+.||+|
T Consensus 75 ---------------------------~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 127 (272)
T cd05075 75 ---------------------------SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEY 127 (272)
T ss_pred ---------------------------ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHH
Confidence 011235689999997 688887632 2348899999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++.
T Consensus 128 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~~~ 193 (272)
T cd05075 128 LSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDY-------------YRQGRIAKMPVKWIAIESLAD-RVYTT 193 (272)
T ss_pred HHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccc-------------eecCCcccCCcccCCHHHccC-CCcCh
Confidence 9999999999999999999999999999999986532210 011122356778999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||......+.... +. .+..++.....+..+.++|.+||+.||.+|||+.+++++
T Consensus 194 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 267 (272)
T cd05075 194 KSDVWSFGVTMWEIATRGQTPYPGVENSEIYDY-LR-QGNRLKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCE 267 (272)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 9999999999999986 6655444333322 22 223333334566789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor |
| >cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=319.68 Aligned_cols=249 Identities=23% Similarity=0.344 Sum_probs=197.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++++.||.|+||+||+|++..+|. .||+|+++.. ........+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~---- 80 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLREN-TSPKANKEILDEAYVMAGVGSPYVCRLLGICLT---- 80 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCC-CCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC----
Confidence 4689999999999999999999987776 4899988643 333445678899999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+++|||++ |+|.+.+... ..+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~ 123 (279)
T cd05109 81 -------------------------------------STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMS 123 (279)
T ss_pred -------------------------------------CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHH
Confidence 23578999997 6999988764 46999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||+++++.+||+|||+++....... ........+++.|+|||++.+ ..++
T Consensus 124 ~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (279)
T cd05109 124 YLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDET-------------EYHADGGKVPIKWMALESILH-RRFT 189 (279)
T ss_pred HHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccc-------------eeecCCCccchhhCCHHHhcc-CCCC
Confidence 99999999999999999999999999999999986532110 001122345678999999877 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||........ ...+. .+..++.....++++.+++.+||+.||++||++.+++..
T Consensus 190 ~~~Di~slG~~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~ 264 (279)
T cd05109 190 HQSDVWSYGVTVWELMTFGAKPYDGIPAREI-PDLLE-KGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDE 264 (279)
T ss_pred chhHHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHHH-CCCcCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999875 5554333322 22222 333333445567899999999999999999999999853
|
Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve |
| >cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-34 Score=328.48 Aligned_cols=256 Identities=29% Similarity=0.491 Sum_probs=203.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||.||+|.++.+|+.||||++............+.+|+.+++.++||||++++++|...
T Consensus 9 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~------- 81 (328)
T cd07856 9 TNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISP------- 81 (328)
T ss_pred ccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecC-------
Confidence 4789999999999999999999999999999999865444334456788999999999999999999887432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|++|||++++|..++.. ..+++..+..++.||+.||+|||++|
T Consensus 82 --------------------------------~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~aL~~LH~~~ 128 (328)
T cd07856 82 --------------------------------LEDIYFVTELLGTDLHRLLTS-RPLEKQFIQYFLYQILRGLKYVHSAG 128 (328)
T ss_pred --------------------------------CCcEEEEeehhccCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 245789999999899887764 45888999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||++..... ......+++.|+|||++.+...++.++|||
T Consensus 129 iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~ 190 (328)
T cd07856 129 VVHRDLKPSNILINENCDLKICDFGLARIQDP------------------QMTGYVSTRYYRAPEIMLTWQKYDVEVDIW 190 (328)
T ss_pred cccCCCCHHHEeECCCCCEEeCccccccccCC------------------CcCCCcccccccCceeeeccCCcCcHHHHH
Confidence 99999999999999999999999999874321 112346788999999887645689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHH--------------------------hhhcCCCC--CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSD--------------------------LKQKGELP--PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~--------------------------l~~~~~~p--~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||............ .......| ......++++.++|++
T Consensus 191 slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 270 (328)
T cd07856 191 SAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEK 270 (328)
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHH
Confidence 99999999997 66433221111000 00000111 1122355789999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.+|.+|||+++++.|+|+....
T Consensus 271 ~l~~~P~~R~t~~ell~~~~~~~~~ 295 (328)
T cd07856 271 MLVFDPQKRISAAEALAHPYLAPYH 295 (328)
T ss_pred HcCCChhhCCCHHHHhcCCcccccc
Confidence 9999999999999999999997553
|
Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U |
| >KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=338.77 Aligned_cols=249 Identities=22% Similarity=0.356 Sum_probs=204.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---E-EEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR---H-YAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~---~-vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++-.+.++||+|+||+||+|+.+..+. . ||||..+... .......++.+|.++|++++|||||++||++..
T Consensus 157 ~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~---- 232 (474)
T KOG0194|consen 157 SDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL---- 232 (474)
T ss_pred cCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC----
Confidence 456667999999999999999986533 3 8999887533 556677889999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC-CCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH-FDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~-l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|||||+|. |+|.++|.+.+. ++..+...++.+.+.||+
T Consensus 233 ------------------------------------~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~ 276 (474)
T KOG0194|consen 233 ------------------------------------EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLE 276 (474)
T ss_pred ------------------------------------CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHH
Confidence 456899999996 599999998774 999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++++|||||-.+|||++.++.+||+|||+++.-..-. .......-...|+|||.+.. ..|+
T Consensus 277 YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~---------------~~~~~~klPirWLAPEtl~~-~~~s 340 (474)
T KOG0194|consen 277 YLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYV---------------MKKFLKKLPIRWLAPETLNT-GIFS 340 (474)
T ss_pred HHHHCCCcchhHhHHHheecCCCeEEeCccccccCCccee---------------eccccccCcceecChhhhcc-Cccc
Confidence 9999999999999999999999999999999987532000 00111134568999999998 5899
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+++|||||||++||+++ ||.+....+....+.......+. ....+.++..++.+||..||++||++.++.+.
T Consensus 341 ~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~-~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~ 416 (474)
T KOG0194|consen 341 FKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPI-PSKTPKELAKVMKQCWKKDPEDRPTMSTIKKK 416 (474)
T ss_pred cccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCC-CCCCHHHHHHHHHHhccCChhhccCHHHHHHH
Confidence 99999999999999985 88888777776666553333332 23556688999999999999999999999863
|
|
| >cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=327.42 Aligned_cols=252 Identities=24% Similarity=0.434 Sum_probs=201.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|+....||.|+||.||+|.+..+++.||+|.+...... ....+.+|+.+++.++||||+++++++..
T Consensus 22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~e~~~l~~l~hp~i~~~~~~~~~---------- 89 (297)
T cd06659 22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHQNVVEMYKSYLV---------- 89 (297)
T ss_pred hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccc--hHHHHHHHHHHHHhCCCCchhhhhhheee----------
Confidence 444556899999999999999999999999999754332 34568899999999999999999987632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....|++|||+++ +|..++.. ..+++..++.++.||+.||+|||++|+
T Consensus 90 ------------------------------~~~~~iv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i 138 (297)
T cd06659 90 ------------------------------GEELWVLMEFLQGGALTDIVSQ-TRLNEEQIATVCESVLQALCYLHSQGV 138 (297)
T ss_pred ------------------------------CCeEEEEEecCCCCCHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3568999999975 77776543 568999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.+||+|||++....... .......|++.|+|||++.+ ..++.++||||
T Consensus 139 vH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 202 (297)
T cd06659 139 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------PKRKSLVGTPYWMAPEVISR-TPYGTEVDIWS 202 (297)
T ss_pred ecCCCCHHHeEEccCCcEEEeechhHhhccccc---------------ccccceecCccccCHHHHcc-CCCCchhhHHH
Confidence 999999999999999999999999987543211 01133578999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||++|||++ ||......+...................++.+.++|.+||+.+|.+||++.++++|+|+.+.
T Consensus 203 lG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~ 277 (297)
T cd06659 203 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPFLLQT 277 (297)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCccccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhChhhccC
Confidence 9999999997 76655444333322211111222334556789999999999999999999999999987765
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i |
| >cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=321.55 Aligned_cols=250 Identities=22% Similarity=0.317 Sum_probs=198.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.+.||+|+||.||+|.+.. ++..||||+++.... ......+.+|+++|+.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 79 (280)
T cd05049 4 RDTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS-NDARKDFEREAELLTNFQHENIVKFYGVCTE--- 79 (280)
T ss_pred hHHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC-HHHHHHHHHHHHHHHhcCCCCchheeeEEec---
Confidence 3578899999999999999998853 367899999864322 2345689999999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------CCCCHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------------DHFDKE 493 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------------~~l~e~ 493 (1170)
...+|++|||++ ++|.+++... ..+++.
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05049 80 -------------------------------------GDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS 122 (280)
T ss_pred -------------------------------------CCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHH
Confidence 346799999996 5999988654 237888
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
.+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++.+..... ........+++.
T Consensus 123 ~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05049 123 QLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDY-------------YRVGGHTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcc-------------eecCCCCcccce
Confidence 9999999999999999999999999999999999999999999999975422110 001123356789
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
|+|||++.+ ..++.++|||||||++|||++ ||......+...... .+..+......+..+.+++.+||+.||.
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~ 266 (280)
T cd05049 190 WMPPESIMY-RKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECIT--QGRLLQRPRTCPSEVYDIMLGCWKRDPQ 266 (280)
T ss_pred ecChhhhcc-CCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCcc
Confidence 999999987 568999999999999999996 665554444333332 2333333345677999999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+||++.++++.
T Consensus 267 ~Rp~~~eil~~ 277 (280)
T cd05049 267 QRINIKDIHER 277 (280)
T ss_pred cCCCHHHHHHH
Confidence 99999999863
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt |
| >cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-34 Score=314.37 Aligned_cols=243 Identities=22% Similarity=0.344 Sum_probs=190.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 440 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 440 (1170)
+.||+|+||.||+|+++.+|+.||+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 64 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ--------------- 64 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCcc-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC---------------
Confidence 3699999999999999999999999987633 233445679999999999999999999988732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 441 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
...+|+||||++ ++|.+++.... .+++..++.++.|++.||+|||++|++|||
T Consensus 65 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~d 119 (252)
T cd05084 65 -------------------------KQPIYIVMELVQGGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRD 119 (252)
T ss_pred -------------------------CCCeEEEEeeccCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccc
Confidence 345799999996 58999887544 589999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||++........ ........++..|+|||.+.+ ..++.++|||||||+
T Consensus 120 l~p~nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~i 185 (252)
T cd05084 120 LAARNCLVTEKNVLKISDFGMSREEEDGVY-------------ASTGGMKQIPVKWTAPEALNY-GRYSSESDVWSFGIL 185 (252)
T ss_pred cchheEEEcCCCcEEECccccCcccccccc-------------cccCCCCCCceeecCchhhcC-CCCChHHHHHHHHHH
Confidence 999999999999999999999875421100 000111223567999999887 568999999999999
Q ss_pred HHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 599 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 599 L~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||++ ||.......... .+. ....++.....+..+.+++.+||+.+|++|||+.++++.
T Consensus 186 l~e~~~~~~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 249 (252)
T cd05084 186 LWEAFSLGAVPYANLSNQQTRE-AIE-QGVRLPCPELCPDAVYRLMERCWEYDPGQRPSFSTVHQE 249 (252)
T ss_pred HHHHHhCCCCCccccCHHHHHH-HHH-cCCCCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999985 565443333222 222 122222334556789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular |
| >cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-34 Score=316.34 Aligned_cols=246 Identities=23% Similarity=0.320 Sum_probs=197.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||.|+||.||+|.++.+++.||+|++.... .....+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT---MEVEEFLKEAAVMKEIKHPNLVQLLGVCTR--------- 73 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc---hHHHHHHHHHHHHHhCCCCChhheEEEEcC---------
Confidence 57899999999999999999999999999999986432 234578899999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...++++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~ 122 (263)
T cd05052 74 -------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 122 (263)
T ss_pred -------------------------------CCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345799999996 6899988653 358999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|++||||||+|||++.++.+||+|||++........ .......+++.|+|||.+.+ ..++.++|
T Consensus 123 ~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (263)
T cd05052 123 KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY--------------TAHAGAKFPIKWTAPESLAY-NKFSIKSD 187 (263)
T ss_pred CCEeecccCcceEEEcCCCcEEeCCCcccccccccee--------------eccCCCCCccccCCHHHhcc-CCCCchhH
Confidence 9999999999999999999999999999986532210 00112234678999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||++|||++ ||......+.. ..+. ....++.....++++.++|.+||+.||++|||+.++++.
T Consensus 188 v~slG~il~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~ 258 (263)
T cd05052 188 VWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLE-KGYRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQA 258 (263)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCHHHHH-HHHH-CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHH
Confidence 9999999999986 66544333322 2222 222223334567899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays |
| >cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.5e-34 Score=331.19 Aligned_cols=272 Identities=28% Similarity=0.390 Sum_probs=205.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+|++.+.||.|+||.||+|.++.+|+.||+|++..... .....+.+|+.+++.++||||+++++++...+...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~--~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~--- 78 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP--QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDL--- 78 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC--chHHHHHHHHHHHHhcCCCcchhhHhhhccccccc---
Confidence 3689999999999999999999999999999999876543 34567889999999999999999987764321000
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
........+...+|++|||++++|.+.+.. ..+++..++.++.||+.||.|||++|
T Consensus 79 -----------------------~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~aL~~LH~~g 134 (342)
T cd07854 79 -----------------------TEDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLSEEHARLFMYQLLRGLKYIHSAN 134 (342)
T ss_pred -----------------------ccccccccccceEEEEeecccccHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 000011123457899999999999887754 46899999999999999999999999
Q ss_pred ccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 514 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 514 IiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|+||||||+||+++. ++.+||+|||+++.+...... ....+...|+..|+|||.+.+...++.++||
T Consensus 135 ivH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 202 (342)
T cd07854 135 VLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSH------------KGYLSEGLVTKWYRSPRLLLSPNNYTKAIDM 202 (342)
T ss_pred cccCCCCHHHEEEcCCCceEEECCcccceecCCcccc------------ccccccccccccccCHHHHhCccccCchhhH
Confidence 999999999999985 467899999999764321100 0001223688999999987654568899999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhc----------------------CC---CC--CccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQK----------------------GE---LP--PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~----------------------~~---~p--~~~~~~~~e~~~LI~~ 642 (1170)
|||||++|+|++ ||....+.......+... .. .+ ......+.++.+||.+
T Consensus 203 wSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 282 (342)
T cd07854 203 WAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQ 282 (342)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHH
Confidence 999999999996 776544333322221100 00 00 0112355688999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||+.||.+|||+.++++|+|+...
T Consensus 283 ~L~~dP~~R~t~~ell~h~~~~~~ 306 (342)
T cd07854 283 ILTFNPMDRLTAEEALMHPYMSCY 306 (342)
T ss_pred HhCCCchhccCHHHHhCCCccccc
Confidence 999999999999999999999754
|
Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi |
| >cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-34 Score=318.73 Aligned_cols=248 Identities=27% Similarity=0.512 Sum_probs=198.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||.||+|.++.+|+.||||.+..... .......+.+|+.+++.++||||++++++|.+
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-------- 73 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE-------- 73 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEe--------
Confidence 578999999999999999999999999999998875432 23344678899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...++++|||+++ +|.+++.. ...+++..++.++.||+.||+|
T Consensus 74 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 121 (267)
T cd08229 74 --------------------------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHH
Confidence 3568999999974 88888763 3458999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++|+||||+||+++.++.++|+|||++....... .......|++.|+|||++.+ ..++.
T Consensus 122 LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~~~ape~~~~-~~~~~ 185 (267)
T cd08229 122 MHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCC---------------cccccccCCcCccCHHHhcC-CCccc
Confidence 999999999999999999999999999999987653211 01123468999999999977 56889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHH-HHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++||||||+++|+|++ ||...... ......+. ....++ .....++++.++|.+||+.||.+|||+.+|++
T Consensus 186 ~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~ 260 (267)
T cd08229 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDITYVYD 260 (267)
T ss_pred hhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhh-cCCCCCCCcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence 9999999999999997 66543221 12222222 222222 22345678999999999999999999998875
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. |
| >cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-34 Score=320.06 Aligned_cols=253 Identities=28% Similarity=0.439 Sum_probs=203.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc---CCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.|+..+.||.|+||.||+|.+..+|+.||+|.++... .......+.+|+.+++.++ ||||++++++|.+
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~------- 73 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDT-PDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLK------- 73 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCC-CchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeee-------
Confidence 5788899999999999999999999999999987543 2234567889999999996 9999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|++|||+++ +|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~i~~~l~~lh~ 119 (277)
T cd06917 74 ---------------------------------GPRLWIIMEYAEGGSVRTLMKA-GPIAEKYISVIIREVLVALKYIHK 119 (277)
T ss_pred ---------------------------------CCEEEEEEecCCCCcHHHHHHc-cCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3567999999965 88888765 478999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
.||+|+||+|+||+++.++.++|+|||++..+.... .......|++.|+|||.+.+...++.++|
T Consensus 120 ~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 184 (277)
T cd06917 120 VGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS---------------SKRSTFVGTPYWMAPEVITEGKYYDTKAD 184 (277)
T ss_pred CCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc---------------cccccccCCcceeCHHHhccCCccccchh
Confidence 999999999999999999999999999998653221 01123468999999999876455789999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccc-cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV-AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~-~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+|||||++|+|++ ||............. ....+.... ..++++.++|.+||+.||++||++.+++.|+|+.+..
T Consensus 185 v~slG~~l~~ll~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~ 262 (277)
T cd06917 185 IWSLGITIYEMATGNPPYSDVDAFRAMMLIP--KSKPPRLEDNGYSKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS 262 (277)
T ss_pred HHHHHHHHHHHHhCCCCCCCCChhhhhhccc--cCCCCCCCcccCCHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence 9999999999997 776544332222111 111222111 2567899999999999999999999999999997765
|
Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent |
| >PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-34 Score=320.76 Aligned_cols=245 Identities=30% Similarity=0.510 Sum_probs=191.7
Q ss_pred eEEeeeccCCcEEEEEEEEc----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 358 EELQPLGHGGFGHVVLCKNK----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++.+.||.|.||.||+|.+. ..+..|+||.++. .......+.+.+|+..+++++||||+++++++..
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~-------- 72 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKP-SSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIE-------- 72 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEEST-TSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEES--------
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEecc-ccccccceeeeecccccccccccccccccccccc--------
Confidence 46789999999999999998 4467899999954 2344457889999999999999999999999853
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+++|||||+ |+|.+++... ..+++...+.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh 120 (259)
T PF07714_consen 73 --------------------------------NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH 120 (259)
T ss_dssp --------------------------------SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 233789999997 6999999876 67999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++++|+||+|+|||++.++.+||+|||++........ ........+...|+|||.+.+ ..++.++
T Consensus 121 ~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~-------------~~~~~~~~~~~~~~aPE~~~~-~~~~~ks 186 (259)
T PF07714_consen 121 SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK-------------YKNDSSQQLPLRYLAPEVLKD-GEYTKKS 186 (259)
T ss_dssp HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS-------------EEESTTSESGGGGS-HHHHHH-SEESHHH
T ss_pred cccccccccccccccccccccccccccccccccccccc-------------ccccccccccccccccccccc-ccccccc
Confidence 99999999999999999999999999999986521110 011233457788999999987 4589999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||+++|||++ ||......+.... +. .+..++.....+..+.++|.+||+.||.+|||+.+|++
T Consensus 187 DVysfG~~l~ei~~~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~ 257 (259)
T PF07714_consen 187 DVYSFGMLLYEILTLGKFPFSDYDNEEIIEK-LK-QGQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ 257 (259)
T ss_dssp HHHHHHHHHHHHHTTSSGTTTTSCHHHHHHH-HH-TTEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred ccccccccccccccccccccccccccccccc-cc-ccccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 99999999999997 6665544443333 32 33334444556789999999999999999999999986
|
Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A .... |
| >PRK14799 thrS threonyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-34 Score=342.84 Aligned_cols=357 Identities=15% Similarity=0.151 Sum_probs=261.2
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
..+.|+++|+|.++.+++.|++.+++.+.++||++|.||.+ ++ .++.+.+.++||.+ |.+|+.++|||+.|++
T Consensus 155 ~~~~G~~~~lP~G~~i~~~L~~~~r~~~~~~Gy~eV~TP~i~~~eL~k~SGh~~~y~~~mf~~-~~~~e~~~LrPm~cp~ 233 (545)
T PRK14799 155 EAGSGLVLFHPKGQTIRNELIAFMREINDSMGYQEVYTSHVFKTDIWKISGHYTLYRDKLIVF-NMEGDEYGVKPMNCPA 233 (545)
T ss_pred ccCCcceEEcChHHHHHHHHHHHHHHHHHHcCCeEEECCccchHHHHhhccccccchhhccee-eccCceEEeccCCCHH
Confidence 45789999999999999999999999999999999999999 22 23345588999988 8889999999999999
Q ss_pred HHHHHHhCC----CCceeEEEecCeEEcCCCCC-----CCCceeEeEEEEeCCCCcc-cHH-HHHHHHHHHHHHcCCC-c
Q 001059 787 FIRWAISNQ----KSSFKRYEISSVYRRAIGHS-----PPNRYLQGDFDIIGGASAL-TEA-EVLKVTMDIVTRFFHA-E 854 (1170)
Q Consensus 787 iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~~-----~~~ef~Q~GvEiiG~~~~~-aDa-Evi~la~~~l~~lgi~-~ 854 (1170)
++|+++.+. ..|+|+|++|+|||+|+++. |.|+|+|.++++||.++.. +|+ |++.++.++++.+|++ .
T Consensus 234 ~~~~~~~~~~SyrdLPlR~~e~g~vfR~E~sg~l~GL~RvReF~Q~DaHif~~~~q~~~E~~~~l~~i~~vy~~fG~~~~ 313 (545)
T PRK14799 234 HILIYKSKPRTYRDLPIRFSEFGHVYRWEKKGELYGLLRVRGFVQDDGHIFLREDQLREEIKMLISKTVEVWHKFGFKDD 313 (545)
T ss_pred HHHHHhccccChhhCCHhhEEecceecCCCCCCccccccceeEEEcccEEEeCHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999988742 46999999999999998874 6678999999999999874 887 9999999999999996 2
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
++.+.++++. .+.+|.++.|.+....+ ++++.+.|++....+...+++ |
T Consensus 314 ~~~i~ls~Rp-----e~~~G~~~~wdka~~~l----------------------~~~L~~~gl~~~~~~g~gafy----g 362 (545)
T PRK14799 314 DIKPYLSTRP-----DESIGSDELWEKATNAL----------------------ISALQESGLKFGIKEKEGAFY----G 362 (545)
T ss_pred cEEEEEEcCh-----hhhcCCHHHHHHHHHHH----------------------HHHHHHcCCCeEEecceeccc----c
Confidence 4999999985 34566654332221111 223333444433333333332 2
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
+.. +..+..++.+. .. + ..+.+|+.+.+.++ + +.+..+ + .
T Consensus 363 pki------------D~~v~dalgr~-~q---~-~Tiqldf~lp~rf~----L--ey~~~~-~--------------~-- 402 (545)
T PRK14799 363 PKI------------DFEIRDSLGRW-WQ---L-STIQVDFNLPERFK----L--EYIDKD-G--------------I-- 402 (545)
T ss_pred Ccc------------ceEehhhcCch-hh---h-hhhhhhcCcccccc----e--EEEcCC-C--------------C--
Confidence 100 00111122211 00 0 12334444444333 1 111110 0 0
Q ss_pred chhhhhcccccccccCCCCCCC-CceEEeccHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPP-SGVGASLALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1090 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~-pAvGfaiglerL~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~ 1090 (1170)
..+++ ...|+..|+||++.+|.+ +..+ ...+|.+|+|++.+ +....+|.++++.||+
T Consensus 403 -----------------~~~pv~ihr~~~GgiERli~iL~e~~~G~~P-~wlaP~qV~Iipi~-e~~~~~A~~Ia~~LR~ 463 (545)
T PRK14799 403 -----------------KKRPVMVHRAIYGSIDRFVAILLEHFKGKLP-TWLSSVQVRVLPIT-DEVNEYAEKVLNDMRK 463 (545)
T ss_pred -----------------CcccEEEEccCCCCHHHHHHHHHHHcCCCCC-CCCCCceEEEEEcC-HHHHHHHHHHHHHHHh
Confidence 00111 122677799999988853 3222 22467899999996 6678899999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1091 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1091 ~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
.|++|+++.. ++++++++++|++.|+|++++||++|.++|+|+||++.+++|..++++++++.+.+.+.+
T Consensus 464 ~GirVelD~~-~~~lgkkir~A~k~gip~viIIG~~E~e~~~VtVR~r~~~eq~~v~l~eli~~l~~~i~~ 533 (545)
T PRK14799 464 RRIRAEIDYA-GETLSKRIKNAYDQGVPYILIVGKKEASEGTVTVRARGNIEVRNVKFEKFLELLITEIAQ 533 (545)
T ss_pred CCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEEChhHhhcCeEEEEECCCCceEEEcHHHHHHHHHHHHhh
Confidence 9999998876 679999999999999999999999999999999999999999999999999999887764
|
|
| >PTZ00024 cyclin-dependent protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=328.27 Aligned_cols=272 Identities=25% Similarity=0.384 Sum_probs=206.3
Q ss_pred CCceE-EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------------hHHHHHHHHHHHHhccCCCceeEEE
Q 001059 355 NDFEE-LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------------VNDRILREVATLSRLQHQHVVRYYQ 421 (1170)
Q Consensus 355 ~~y~~-~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------------~~~~~~~Ev~iL~~l~HpnIV~l~~ 421 (1170)
++|.. .+.||.|+||+||+|.++.+|+.||||+++....... ....+.+|+.+++.++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45554 4679999999999999999999999999875433210 0124779999999999999999998
Q ss_pred EEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHH
Q 001059 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ 501 (1170)
Q Consensus 422 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~q 501 (1170)
+|.. ...+|++|||++++|.+++.....+++..+..++.|
T Consensus 88 ~~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~q 127 (335)
T PTZ00024 88 VYVE----------------------------------------GDFINLVMDIMASDLKKVVDRKIRLTESQVKCILLQ 127 (335)
T ss_pred EEec----------------------------------------CCcEEEEEeccccCHHHHHHhcCCCCHHHHHHHHHH
Confidence 8732 356899999999999999988788999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+.||+|||++|++||||||+||+++.++.+||+|||++............... .............+++.|+|||.+.
T Consensus 128 l~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~y~aPE~~~ 206 (335)
T PTZ00024 128 ILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKD-ETMQRREEMTSKVVTLWYRAPELLM 206 (335)
T ss_pred HHHHHHHHHhCCeecccccHHHeEECCCCCEEECCccceeeccccccccccccc-ccccccccccccccccCCCCChhcc
Confidence 999999999999999999999999999999999999999865422111100000 0000111223446789999999987
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC---------------------CC----ccccCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---------------------PP----SWVAKF 633 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~---------------------p~----~~~~~~ 633 (1170)
+...++.++|||||||++|||++ ||....+......+....+.. +. .....+
T Consensus 207 ~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (335)
T PTZ00024 207 GAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNAS 286 (335)
T ss_pred cCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCC
Confidence 75557999999999999999997 665444433322221111100 00 112345
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.++.++|++||+.+|++|||+++++.|+||....
T Consensus 287 ~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~ 320 (335)
T PTZ00024 287 DDAIDLLQSLLKLNPLERISAKEALKHEYFKSDP 320 (335)
T ss_pred hHHHHHHHHHcCCCchhccCHHHHhcCcccCCCC
Confidence 6789999999999999999999999999998775
|
|
| >cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-34 Score=330.71 Aligned_cols=261 Identities=20% Similarity=0.307 Sum_probs=198.4
Q ss_pred eeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G--~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
..||+| +||+||+|.+..+|+.||+|++..........+.+.+|+.+++.++||||++++++|..
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~------------- 70 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTT------------- 70 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEec-------------
Confidence 456777 99999999999999999999998665555556788999999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
...+|++|||++ ++|.+++... ..+++..+..++.||+.||+|||++||+
T Consensus 71 ---------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~iv 123 (328)
T cd08226 71 ---------------------------GSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYI 123 (328)
T ss_pred ---------------------------CCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCee
Confidence 356799999997 5898888764 3589999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYS 594 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwS 594 (1170)
||||||+|||++.++.+|++||+.+............. ........++..|+|||++.+. ..++.++||||
T Consensus 124 HrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws 195 (328)
T cd08226 124 HRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVV--------YDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYS 195 (328)
T ss_pred cCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccccc--------ccccccccCccCccChhhhcCCCCCCCchhhHHH
Confidence 99999999999999999999998765432211000000 0001112456789999998763 34789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC--------------------------------------------C
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--------------------------------------------P 627 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p--------------------------------------------~ 627 (1170)
|||++|||++ ||......+.....+......| +
T Consensus 196 lG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (328)
T cd08226 196 VGITACELATGRVPFQDMLRTQMLLQKLKGPPYSPLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTP 275 (328)
T ss_pred HHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCCCccccccchhhhhhccchhhhhcccccchhccccccccccccccch
Confidence 9999999996 6655444333333222111100 1
Q ss_pred ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 001059 628 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 628 ~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
.....++.+.+||++||+.||++|||++++++|+||.+....
T Consensus 276 ~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~~~~~~~~~ 317 (328)
T cd08226 276 SSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHAFFKQVKEQ 317 (328)
T ss_pred hhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCHHHHHHHHh
Confidence 112234578999999999999999999999999998776654
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig |
| >cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=316.08 Aligned_cols=254 Identities=20% Similarity=0.275 Sum_probs=198.2
Q ss_pred ceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
|.+.+.||+|+||.||+|.+..+ +..||+|.++...........+.+|+..++.++||||+++++++.+..
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------ 74 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEAS------ 74 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCC------
Confidence 56788999999999999998754 478999999865555555678999999999999999999998874321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc------CCCCHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~e~~~~~i~~qI~~gL 506 (1170)
........+++|||++ ++|..++... ..+++..++.++.|++.||
T Consensus 75 ----------------------------~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL 126 (273)
T cd05035 75 ----------------------------SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGM 126 (273)
T ss_pred ----------------------------ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHH
Confidence 0112356799999997 5888887432 3589999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||+++++||||||+||++++++.+||+|||+++........ .......++..|+|||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05035 127 EYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYY-------------RQGRIAKMPVKWIAIESLAD-RVY 192 (273)
T ss_pred HHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccc-------------cccccccCCccccCHhhccc-CCC
Confidence 9999999999999999999999999999999999865322110 01112345678999999876 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+..... . .+..+......++++.+++.+||+.||.+|||+.+++++
T Consensus 193 ~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~ 268 (273)
T cd05035 193 TSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYL-R-HGNRLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREV 268 (273)
T ss_pred CcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-H-cCCCCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999999985 56544443333222 2 223333344567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu |
| >cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=314.23 Aligned_cols=248 Identities=28% Similarity=0.518 Sum_probs=198.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||.|+||.||+|.+..+|+.||+|.++.... .......+.+|+.++++++|+||+++++++.+
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~-------- 73 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIE-------- 73 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeec--------
Confidence 589999999999999999999999999999999875433 22335678999999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+++|||++ ++|..++.. ...+++.+++.++.||+.||.|
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 121 (267)
T cd08224 74 --------------------------------NNELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEH 121 (267)
T ss_pred --------------------------------CCeEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHH
Confidence 356799999997 589888753 3458999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.
T Consensus 122 lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~ 185 (267)
T cd08224 122 MHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NGYNF 185 (267)
T ss_pred HHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCC---------------cccceecCCccccCHHHhcc-CCCCc
Confidence 999999999999999999999999999999987543211 01123468899999999887 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchh-HHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 589 KADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++|||||||++|+|++ ||.... .......... .+..++.. ...+..+.++|.+||..+|++|||+.+|++
T Consensus 186 ~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~ 260 (267)
T cd08224 186 KSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-KCDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260 (267)
T ss_pred hhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhh-cCCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence 9999999999999997 664332 1111222222 22233222 245668999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a |
| >cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-34 Score=318.98 Aligned_cols=255 Identities=29% Similarity=0.444 Sum_probs=199.1
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCccccCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
|++.+.||.|+||.||+|.++.+|+.||+|.++...........+.+|+.+++.+ +||||+++++++.....
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~----- 75 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRT----- 75 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccC-----
Confidence 6789999999999999999998899999999976544333345677788877666 59999999999854310
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.....+|++|||++++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 76 ------------------------------~~~~~~~l~~e~~~~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~ 125 (287)
T cd07838 76 ------------------------------DRELKLTLVFEHVDQDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHS 125 (287)
T ss_pred ------------------------------CCCceeEEEehhcccCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1124589999999999998887643 48999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
++++|+||||+||+++.++.+||+|||++..+.... ......+++.|+|||++.+ ..++.++|
T Consensus 126 ~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~PE~~~~-~~~~~~~D 188 (287)
T cd07838 126 HRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEM----------------ALTSVVVTLWYRAPEVLLQ-SSYATPVD 188 (287)
T ss_pred CCeeeccCChhhEEEccCCCEEEeccCcceeccCCc----------------ccccccccccccChHHhcc-CCCCCcch
Confidence 999999999999999999999999999997653211 0122357899999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------CCCC--------ccccCCHHHHHHHHHcc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------ELPP--------SWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------~~p~--------~~~~~~~e~~~LI~~~L 644 (1170)
||||||++|||++ ||......+....+..... ..+. .....++.+.++|.+||
T Consensus 189 i~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l 268 (287)
T cd07838 189 MWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKML 268 (287)
T ss_pred hhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHh
Confidence 9999999999997 6655444333322221100 0000 01123457789999999
Q ss_pred CCCCCCCCCHHHHHhccCC
Q 001059 645 SPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~ 663 (1170)
+.||.+||++.++++|+||
T Consensus 269 ~~dp~~Rp~~~~il~~~~~ 287 (287)
T cd07838 269 TFNPHKRISAFEALQHPYF 287 (287)
T ss_pred ccCCccCCCHHHHhcCcCC
Confidence 9999999999999999996
|
Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both |
| >cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-34 Score=320.17 Aligned_cols=253 Identities=29% Similarity=0.445 Sum_probs=205.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|+.++.||.|+||.||+|.+..++..||+|++..... ......+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 73 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK--------- 73 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE---------
Confidence 457788999999999999999998999999999875432 3445678999999999999999999998743
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+||||+++ +|.+++.. +.+++..+..++.|++.||+|||+++
T Consensus 74 -------------------------------~~~~~lv~e~~~~~~L~~~i~~-~~l~~~~~~~~~~~l~~~l~~lh~~~ 121 (277)
T cd06640 74 -------------------------------GTKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLDYLHSEK 121 (277)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4578999999975 88888764 56899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++|+||+|+||+++.++.++|+|||++....... .......++..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~apE~~~~-~~~~~~~Dv~ 185 (277)
T cd06640 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIQQ-SAYDSKADIW 185 (277)
T ss_pred ccCcCCChhhEEEcCCCCEEEcccccceeccCCc---------------cccccccCcccccCHhHhcc-CCCccHHHHH
Confidence 9999999999999999999999999997542211 01123468889999999887 4689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||++|||++ ||............ .....+......+..+.++|.+||+.+|.+||++.++++|+|+.+..
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~ 260 (277)
T cd06640 186 SLGITAIELAKGEPPNSDMHPMRVLFLI--PKNNPPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNA 260 (277)
T ss_pred HHHHHHHHHHHCCCCCCCcChHhHhhhh--hcCCCCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcc
Confidence 99999999997 66544433322221 12222333334556889999999999999999999999999987664
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter |
| >cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-34 Score=319.67 Aligned_cols=250 Identities=26% Similarity=0.363 Sum_probs=194.6
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhh-HHHHHHHH---HHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV-NDRILREV---ATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~-~~~~~~Ev---~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
.||+|+||.||+|.+..+|+.||+|++......... ...+..|. ..++...||||+++++++.+
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~------------ 68 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT------------ 68 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeec------------
Confidence 489999999999999989999999998754322111 12233443 34444589999999887732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
...+|+||||++ ++|.+++...+.+++..++.++.|++.||+|||+++|+|
T Consensus 69 ----------------------------~~~~~~v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H 120 (278)
T cd05606 69 ----------------------------PDKLSFILDLMNGGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVY 120 (278)
T ss_pred ----------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEc
Confidence 457899999996 589888887788999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+||+++.++.+||+|||++...... ......|+..|+|||++.+...++.++||||+|
T Consensus 121 ~di~p~nili~~~~~~kl~dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G 183 (278)
T cd05606 121 RDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYDSSADWFSLG 183 (278)
T ss_pred CCCCHHHEEECCCCCEEEccCcCccccCcc-----------------CCcCcCCCcCCcCcHHhcCCCCCCcccchHhHH
Confidence 999999999999999999999998754211 012347899999999987644689999999999
Q ss_pred HHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCC
Q 001059 597 IVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQ 665 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~ 665 (1170)
|++|+|++ ||..... ......... ..+..+...++++.+++.+||..+|.+|| ++.++++|+|+..
T Consensus 184 ~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~ 260 (278)
T cd05606 184 CMLFKLLRGHSPFRQHKTKDKHEIDRMTLT---MAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRS 260 (278)
T ss_pred HHHHHHHhCCCCCCCCCccchHHHHHHhhc---cCCCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccC
Confidence 99999997 7764421 111111111 11222223567999999999999999999 9999999999998
Q ss_pred chHHHH
Q 001059 666 MEYELL 671 (1170)
Q Consensus 666 ~~~~~~ 671 (1170)
..+..+
T Consensus 261 ~~~~~~ 266 (278)
T cd05606 261 LDWQMV 266 (278)
T ss_pred CCchHh
Confidence 775543
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co |
| >cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=309.99 Aligned_cols=256 Identities=32% Similarity=0.497 Sum_probs=208.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|...+.||+|++|.||+|.+..+|+.|++|++..........+.+.+|+.++++++||||+++++.+.+.
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~--------- 71 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDE--------- 71 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecC---------
Confidence 47888999999999999999999999999999976654445567899999999999999999999887331
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....++++|||++ ++|.+++.....+++..++.++.|++.||+|||++|+
T Consensus 72 -----------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~ 122 (260)
T cd06606 72 -----------------------------EKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGI 122 (260)
T ss_pred -----------------------------CCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence 0257899999995 6999999887789999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+|+||+|+||+++.++.++|+|||.+......... .......++..|+|||.+.+ ..++.++||||
T Consensus 123 ~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~-------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~s 188 (260)
T cd06606 123 VHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG-------------EGTGSVRGTPYWMAPEVIRG-EEYGRAADIWS 188 (260)
T ss_pred cccCCCHHHEEEcCCCCEEEcccccEEeccccccc-------------ccccCCCCCccccCHhhhcC-CCCCchhhHHH
Confidence 99999999999999999999999999865432110 00123468899999999887 45899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||+++|+|++ ||............+......+......++.+.++|.+||+.||.+||++.++++|||+
T Consensus 189 lG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 260 (260)
T cd06606 189 LGCTVIEMATGKPPWSELGNPMAALYKIGSSGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL 260 (260)
T ss_pred HHHHHHHHHhCCCCCCCCCchHHHHHhccccCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence 9999999997 76655422222222222223333333446789999999999999999999999999996
|
Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK |
| >cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-33 Score=319.40 Aligned_cols=253 Identities=24% Similarity=0.432 Sum_probs=203.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|...+.||.|++|.||++.+..+++.||+|++..... ...+.+.+|+.+++.++||||+++++++..
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~---------- 87 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ--QRRELLFNEVVIMRDYQHPNIVEMYSSYLV---------- 87 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch--hHHHHHHHHHHHHHHcCCCChheEEEEEEc----------
Confidence 45556799999999999999998999999999865332 234568899999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....|+++||++ ++|.+++.. .++++..++.++.||+.||+|||++|+
T Consensus 88 ------------------------------~~~~~~v~e~~~~~~L~~~~~~-~~~~~~~~~~~~~ql~~~l~~lH~~~i 136 (285)
T cd06648 88 ------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIATVCLAVLKALSFLHAQGV 136 (285)
T ss_pred ------------------------------CCeEEEEEeccCCCCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 356799999996 589888876 679999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++||||
T Consensus 137 ~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~s 200 (285)
T cd06648 137 IHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPEVISR-LPYGTEVDIWS 200 (285)
T ss_pred ecCCCChhhEEEcCCCcEEEcccccchhhccCC---------------cccccccCCccccCHHHhcC-CCCCCcccHHH
Confidence 999999999999999999999999987542110 01123468999999999887 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||++|+|++ ||..........................++.+.++|.+||+.+|.+|||+.++++|+|+....
T Consensus 201 lGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 276 (285)
T cd06648 201 LGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLKNLHKVSPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAG 276 (285)
T ss_pred HHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCcccccCCHHHHHHHHHHcccChhhCcCHHHHccCcccccCC
Confidence 9999999997 776544433333222221111122223567899999999999999999999999999987754
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun |
| >cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-34 Score=337.07 Aligned_cols=251 Identities=22% Similarity=0.291 Sum_probs=195.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|.+... +..||||+++... .....+.+.+|+.+|+++. ||||++++++|.+
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~-~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~-- 112 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTA-RSSEKQALMSELKIMTHLGPHLNIVNLLGACTK-- 112 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCC-ChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEcc--
Confidence 36788999999999999999997533 3479999986543 2334567999999999996 9999999999832
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------------------- 487 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------------------- 487 (1170)
...+|+|||||+ |+|.+++...
T Consensus 113 --------------------------------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 154 (400)
T cd05105 113 --------------------------------------SGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIF 154 (400)
T ss_pred --------------------------------------CCceEEEEEecCCCcHHHHHHHhhhhhhcccccccccccccc
Confidence 346799999996 5898877542
Q ss_pred -----------------------------------------------------------------------------CCC
Q 001059 488 -----------------------------------------------------------------------------DHF 490 (1170)
Q Consensus 488 -----------------------------------------------------------------------------~~l 490 (1170)
..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 234 (400)
T cd05105 155 GINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGL 234 (400)
T ss_pred CCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCC
Confidence 236
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+..... ........+
T Consensus 235 ~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~~~ 301 (400)
T cd05105 235 TTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSN-------------YVSKGSTFL 301 (400)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceecccccc-------------ccccCCcCC
Confidence 7788899999999999999999999999999999999999999999999986432110 011123457
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCC
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
++.|+|||++.+ ..++.++|||||||++|||++ ||............+.. +..++.....++++.++|.+||+.
T Consensus 302 ~~~y~aPE~~~~-~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~cl~~ 379 (400)
T cd05105 302 PVKWMAPESIFD-NLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKS-GYRMAKPDHATQEVYDIMVKCWNS 379 (400)
T ss_pred CcceEChhhhcC-CCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhc-CCCCCCCccCCHHHHHHHHHHCcc
Confidence 789999999887 568999999999999999984 66544333333333332 222333345677899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
||++||++.++.+.
T Consensus 380 dP~~RPt~~~l~~~ 393 (400)
T cd05105 380 EPEKRPSFLHLSDI 393 (400)
T ss_pred CHhHCcCHHHHHHH
Confidence 99999999998763
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF- |
| >cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=318.25 Aligned_cols=257 Identities=26% Similarity=0.458 Sum_probs=202.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|+..+.||.|++|.||+|.+..+++.||+|.+..... .....++.+|+++++.++||||++++++|.+.
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~-------- 71 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN-PDLQKQILRELEINKSCKSPYIVKYYGAFLDE-------- 71 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc-hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEcc--------
Confidence 478999999999999999999998999999999875433 24456789999999999999999999887432
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|++|||++ ++|.+++.. ...+++..+..++.||+.||+||
T Consensus 72 ------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~l 121 (287)
T cd06621 72 ------------------------------SSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYL 121 (287)
T ss_pred ------------------------------CCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2346899999997 588877643 34589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+.|++|+||+|+||+++.++.++|+|||++....... .....++..|+|||.+.+ ..++.+
T Consensus 122 H~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~-----------------~~~~~~~~~y~~pE~~~~-~~~~~~ 183 (287)
T cd06621 122 HSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSL-----------------AGTFTGTSFYMAPERIQG-KPYSIT 183 (287)
T ss_pred HHCCcccCCCCHHHEEEecCCeEEEeeccccccccccc-----------------cccccCCccccCHHHhcC-CCCCch
Confidence 99999999999999999999999999999987542110 112357889999999887 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchh-----HHHHHHHHhhhcC-CCCCcc---ccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAM-----ERQIVLSDLKQKG-ELPPSW---VAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~-----~~~~~~~~l~~~~-~~p~~~---~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+|||||||++|+|++ ||.... ..+.......... .++... ...++.+.++|.+||..+|.+|||+.++
T Consensus 184 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~ei 263 (287)
T cd06621 184 SDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDM 263 (287)
T ss_pred hhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCCCCCCchHHHHHHHHHHHcCCCcccCCCHHHH
Confidence 999999999999997 665431 1111111111011 111111 1234578999999999999999999999
Q ss_pred HhccCCCCchH
Q 001059 658 LQDALPPQMEY 668 (1170)
Q Consensus 658 L~~~~~~~~~~ 668 (1170)
++|+|+.+...
T Consensus 264 l~~~~~~~~~~ 274 (287)
T cd06621 264 LEHPWIKAQMK 274 (287)
T ss_pred HhCcccccccc
Confidence 99999976643
|
Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include |
| >cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.8e-34 Score=321.36 Aligned_cols=252 Identities=23% Similarity=0.277 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC----------------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCce
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDG----------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg----------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV 417 (1170)
.++|++.+.||+|+||.||+|.+..++ ..||+|.+.... .......+.+|+.+++.++||||+
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~ 82 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDA-SDNAREDFLKEVKILSRLSDPNIA 82 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhcCCCCEe
Confidence 368999999999999999999887543 568999987443 234456789999999999999999
Q ss_pred eEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--------
Q 001059 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------- 488 (1170)
Q Consensus 418 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------- 488 (1170)
+++++|.. ...++++|||++ ++|.+++....
T Consensus 83 ~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~ 122 (296)
T cd05051 83 RLLGVCTV----------------------------------------DPPLCMIMEYMENGDLNQFLQKHVAETSGLAC 122 (296)
T ss_pred EEEEEEec----------------------------------------CCCcEEEEecCCCCCHHHHHHhcccccccccc
Confidence 99988732 246799999996 58999887655
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 001059 489 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565 (1170)
Q Consensus 489 ---~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1170)
.+++..++.++.|++.||+|||++||+||||||+||+++.++.++|+|||+++....... ....
T Consensus 123 ~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~ 189 (296)
T cd05051 123 NSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDY-------------YRVQ 189 (296)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcc-------------eeec
Confidence 689999999999999999999999999999999999999999999999999975432210 0011
Q ss_pred cccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-----CCCchhHHHHHHHHhhh-----cCCCCCccccCCHH
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDLKQ-----KGELPPSWVAKFSE 635 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~l~~-----~~~~p~~~~~~~~e 635 (1170)
....+++.|+|||++.+ ..++.++|||||||++|||++ ||......+........ .....+.....+++
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (296)
T cd05051 190 GRAPLPIRWMAWESVLL-GKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHFFRDDGRQIYLPRPPNCPKD 268 (296)
T ss_pred CcCCCCceecCHHHhhc-CCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhccccccccccCCCccCCCHH
Confidence 23456789999999887 568999999999999999985 55544333332222111 01111222345578
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 636 QESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 636 ~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.+++.+||+.||.+|||+.++++.
T Consensus 269 l~~li~~cl~~~p~~Rpt~~el~~~ 293 (296)
T cd05051 269 IYELMLECWRRDEEDRPTFREIHLF 293 (296)
T ss_pred HHHHHHHHhccChhcCCCHHHHHHH
Confidence 9999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke |
| >cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=316.32 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=198.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|.++.. +..||+|.+.... .......+.+|+.+|+.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~--- 80 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA-SMRERIEFLNEASVMKEFNCHHVVRLLGVVST--- 80 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc-CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC---
Confidence 47899999999999999999998744 3789999986433 22344578899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------CCCHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------HFDKELAWH 497 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------~l~e~~~~~ 497 (1170)
....|++|||++ ++|.+++.... .+++..++.
T Consensus 81 -------------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05032 81 -------------------------------------GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQ 123 (277)
T ss_pred -------------------------------------CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHH
Confidence 345799999996 69999886432 367889999
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
++.||+.||.|||++|++||||||+|||++.++.+||+|||+++.+...... .......+|..|+||
T Consensus 124 ~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05032 124 MAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMAP 190 (277)
T ss_pred HHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCccc-------------ccCCCCCccccccCH
Confidence 9999999999999999999999999999999999999999999865322110 011234578899999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|.+.+ ..++.++|||||||++|||++ ||......+... ... ....++.....++++.++|.+||+.+|++|||
T Consensus 191 E~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt 267 (277)
T cd05032 191 ESLKD-GVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLK-FVI-DGGHLDLPENCPDKLLELMRMCWQYNPKMRPT 267 (277)
T ss_pred HHHhc-CCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHH-HHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCCC
Confidence 99876 568999999999999999986 665544443333 222 23333333445779999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.++++.
T Consensus 268 ~~~l~~~ 274 (277)
T cd05032 268 FLEIVSS 274 (277)
T ss_pred HHHHHHH
Confidence 9999863
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological |
| >cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-33 Score=314.50 Aligned_cols=245 Identities=22% Similarity=0.390 Sum_probs=194.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||+||+|.+. .+..+|+|.+...... ...+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~-~~~~~aik~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 70 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMKLSHEKLVQLYGVCTK--------- 70 (256)
T ss_pred HHeEEeeEecCcccceEEEEEec-CCCcEEEEEcCCCccc---HHHHHHHHHHHhcCCCCCeeeEEEEEcc---------
Confidence 57999999999999999999886 4557999988643322 3568999999999999999999988732
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 119 (256)
T cd05113 71 -------------------------------QRPIYIVTEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESK 119 (256)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 235699999996 5899988764 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++|+||||+|||++.++.+||+|||.++...... ........++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~--------------~~~~~~~~~~~~y~~pe~~~~-~~~~~~~Di 184 (256)
T cd05113 120 QFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDE--------------YTSSVGSKFPVRWSPPEVLLY-SKFSSKSDV 184 (256)
T ss_pred CeeccccCcceEEEcCCCCEEECCCccceecCCCc--------------eeecCCCccChhhCCHHHHhc-CcccchhHH
Confidence 99999999999999999999999999987542211 001122346678999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||++|+|++ ||.............. ...+......++.+.+++.+||+.||.+||++.+++.+
T Consensus 185 ~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~ 254 (256)
T cd05113 185 WAFGVLMWEVYSLGKMPYERFNNSETVEKVSQ--GLRLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSS 254 (256)
T ss_pred HHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence 999999999986 6654444333333322 22222223346789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds |
| >KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=311.57 Aligned_cols=273 Identities=24% Similarity=0.413 Sum_probs=212.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+..+.|+...+||+|.||+||+|+.+.+|+.||+|++-..+.....-...++|+.+|..++|+|++.+++.|-.-.
T Consensus 14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~---- 89 (376)
T KOG0669|consen 14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKA---- 89 (376)
T ss_pred ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhcc----
Confidence 3346788889999999999999999999999999987554433334456889999999999999999987762210
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.....+...+|+|+.+|..+|..+|... .+++..++.+++.+++.||.|+|
T Consensus 90 ----------------------------Tp~~r~r~t~ylVf~~cehDLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH 141 (376)
T KOG0669|consen 90 ----------------------------TPTNRDRATFYLVFDFCEHDLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH 141 (376)
T ss_pred ----------------------------CCcccccceeeeeHHHhhhhHHHHhcCccccccHHHHHHHHHHHHHHHHHHH
Confidence 0001245678999999999999999866 67999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++.|+|||+||+|+||+.+|.+||+|||+++.+....... ....+..+-|.+|.+||.+.|...|+++.
T Consensus 142 r~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~-----------kprytnrvvTLwYrppEllLG~r~yg~~i 210 (376)
T KOG0669|consen 142 RNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVV-----------KPRYTNRVVTLWYRPPELLLGDREYGPPI 210 (376)
T ss_pred HhhHHhhcccHhhEEEcCCceEEeeccccccceecccccC-----------CCCcccceeeeecCCHHHhhcccccCCcc
Confidence 9999999999999999999999999999998765433211 11235678899999999999999999999
Q ss_pred hhHHHHHHHHHhhc--CCCchhHHHHHHHHhhh-cCCCC-Cccc-------------------------------cCCHH
Q 001059 591 DMYSLGIVFFELWH--PFSTAMERQIVLSDLKQ-KGELP-PSWV-------------------------------AKFSE 635 (1170)
Q Consensus 591 DIwSlGviL~ELlt--Pf~~~~~~~~~~~~l~~-~~~~p-~~~~-------------------------------~~~~e 635 (1170)
|||..|||+.||++ |.......+..+..+.. -+.+. ..|+ ...++
T Consensus 211 DiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~ 290 (376)
T KOG0669|consen 211 DIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDE 290 (376)
T ss_pred hhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChh
Confidence 99999999999997 54433333322222111 11110 0111 11246
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 636 QESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 636 ~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+.+|+.++|..||.+|+++++++.|.||....
T Consensus 291 a~dLle~ll~~DP~kR~~ad~alnh~~F~kdp 322 (376)
T KOG0669|consen 291 ALDLLEKLLKLDPTKRIDADQALNHDFFWKDP 322 (376)
T ss_pred HHHHHHHHhccCcccCcchHhhhchhhhhcCC
Confidence 78999999999999999999999999886654
|
|
| >cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.9e-34 Score=323.61 Aligned_cols=247 Identities=24% Similarity=0.361 Sum_probs=193.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~--vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||.||+|.++.+|.. +|+|.++.. .+......+.+|+.++.++ +||||+++++++.+
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~-~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~----- 79 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH----- 79 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc-CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECC-----
Confidence 47899999999999999999999888765 466665422 2333456788999999999 89999999988732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCCHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKE 493 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~ 493 (1170)
...+|++|||++ ++|.+++.... .+++.
T Consensus 80 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 124 (303)
T cd05088 80 -----------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 124 (303)
T ss_pred -----------------------------------CCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHH
Confidence 346799999997 58999886532 47899
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
.++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++...... .......+++.
T Consensus 125 ~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~ 188 (303)
T cd05088 125 QLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVR 188 (303)
T ss_pred HHHHHHHHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchh----------------hhcccCCCccc
Confidence 99999999999999999999999999999999999999999999998632100 00112234678
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
|+|||++.+ ..++.++|||||||++|||++ ||......+.... .. ....+......++++.+||.+||+.+|.
T Consensus 189 y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 265 (303)
T cd05088 189 WMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LP-QGYRLEKPLNCDDEVYDLMRQCWREKPY 265 (303)
T ss_pred ccCHHHHhc-cCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHH-Hh-cCCcCCCCCCCCHHHHHHHHHHcCCChh
Confidence 999999877 458899999999999999985 6654443333222 21 1222223334567899999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+||++.+++++
T Consensus 266 ~Rp~~~~il~~ 276 (303)
T cd05088 266 ERPSFAQILVS 276 (303)
T ss_pred hCcCHHHHHHH
Confidence 99999999986
|
Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A |
| >cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=318.81 Aligned_cols=256 Identities=22% Similarity=0.303 Sum_probs=197.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|.++. .+..||+|.++... .......+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (288)
T cd05061 5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA-SLRERIEFLNEASVMKGFTCHHVVRLLGVVSK--- 80 (288)
T ss_pred HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcC-CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC---
Confidence 3689999999999999999998752 35589999876432 23334568899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------CCCCHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 497 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 497 (1170)
....|++|||++ |+|.+++... ..++...+..
T Consensus 81 -------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 123 (288)
T cd05061 81 -------------------------------------GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ 123 (288)
T ss_pred -------------------------------------CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHH
Confidence 235699999996 6999998653 2246678899
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.+..... ........++..|+||
T Consensus 124 ~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~p 190 (288)
T cd05061 124 MAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDY-------------YRKGGKGLLPVRWMAP 190 (288)
T ss_pred HHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCcccccccccc-------------ccccCCCcccccccCH
Confidence 999999999999999999999999999999999999999999986432110 0011223467789999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|.+.+ ..++.++|||||||++|||++ ||......+...... .+..+......++.+.+++.+||+.||.+|||
T Consensus 191 E~~~~-~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps 267 (288)
T cd05061 191 ESLKD-GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM--DGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 267 (288)
T ss_pred HHhcc-CCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcC
Confidence 99887 568999999999999999985 776554444332222 22222223345678999999999999999999
Q ss_pred HHHHHh------ccCCCCc
Q 001059 654 ATELLQ------DALPPQM 666 (1170)
Q Consensus 654 a~eiL~------~~~~~~~ 666 (1170)
+.++++ ||+|...
T Consensus 268 ~~~ll~~l~~~~~~~~~~~ 286 (288)
T cd05061 268 FLEIVNLLKDDLHPSFPEV 286 (288)
T ss_pred HHHHHHHHHhhcCCCCCCC
Confidence 999986 5555543
|
Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta |
| >cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=309.91 Aligned_cols=250 Identities=34% Similarity=0.582 Sum_probs=207.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||++.+..+++.||+|++............+.+|+++++.++|||++++++.+..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~---------- 70 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEE---------- 70 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEec----------
Confidence 5889999999999999999999999999999998765555566788999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+++|||+++ +|.+.+... ..+++..++.++.||+.||.|||
T Consensus 71 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh 120 (258)
T cd08215 71 ------------------------------KGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH 120 (258)
T ss_pred ------------------------------CCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999975 899988764 67999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||+|+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++
T Consensus 121 ~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (258)
T cd08215 121 SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV---------------DLAKTVVGTPYYLSPELCQN-KPYNYKS 184 (258)
T ss_pred hCCEecccCChHHeEEcCCCcEEECCccceeecccCc---------------ceecceeeeecccChhHhcc-CCCCccc
Confidence 9999999999999999999999999999998653221 01123478999999999877 4588999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+||+|+++|+|++ ||.............. ...++.....+..+.+++.+||..+|.+|||+.++|+|||+
T Consensus 185 Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~ 258 (258)
T cd08215 185 DIWSLGCVLYELCTLKHPFEGENLLELALKILK--GQYPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQSPFI 258 (258)
T ss_pred cHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence 99999999999996 6655544333333322 22333333556789999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They |
| >cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=317.87 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=195.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++.+.||+|+||+||+|.+..+|.. +++|.+... ........+..|+..++.++||||+++++++.
T Consensus 6 ~~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~----- 79 (279)
T cd05111 6 ETELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDR-SGRQTFQEITDHMLAMGSLDHAYIVRLLGICP----- 79 (279)
T ss_pred HhhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccc-cchHHHHHHHHHHHHHhcCCCCCcceEEEEEC-----
Confidence 36899999999999999999999877764 677776432 22233457788899999999999999998762
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....++++||++ |+|.+++... ..+++..++.++.||+.||+
T Consensus 80 ------------------------------------~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~ 123 (279)
T cd05111 80 ------------------------------------GASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMY 123 (279)
T ss_pred ------------------------------------CCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 123578999996 6999999754 56899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|++||||||+|||++.++.+||+|||+++....... ....+...++..|+|||++.+ ..++
T Consensus 124 ~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~pE~~~~-~~~~ 189 (279)
T cd05111 124 YLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDK-------------KYFYSEHKTPIKWMALESILF-GRYT 189 (279)
T ss_pred HHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCc-------------ccccCCCCCcccccCHHHhcc-CCcC
Confidence 99999999999999999999999999999999986532110 011123457788999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||........ ...+ ..+..++....++.++.+++.+||..||.+|||+.++++.
T Consensus 190 ~~~Dv~slG~il~el~t~g~~p~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~ 264 (279)
T cd05111 190 HQSDVWSYGVTVWEMMSYGAEPYAGMRPHEV-PDLL-EKGERLAQPQICTIDVYMVMVKCWMIDENVRPTFKELANE 264 (279)
T ss_pred chhhHHHHHHHHHHHHcCCCCCCCCCCHHHH-HHHH-HCCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 99999999999999986 6655433322 2222 2344433334456788999999999999999999999763
|
Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r |
| >cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=313.38 Aligned_cols=249 Identities=22% Similarity=0.318 Sum_probs=198.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||+|+||+||+|.++.+ ...||||.++... .......+.+|+.+++.++||||+++++.+.+
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS-SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTK------ 76 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCcceEeEEEec------
Confidence 6799999999999999999999754 4579999886432 33345678899999999999999999987632
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++|||++ ++|.+++... +.+++..++.++.|++.||+||
T Consensus 77 ----------------------------------~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~L 122 (266)
T cd05033 77 ----------------------------------SRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYL 122 (266)
T ss_pred ----------------------------------CCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999997 5899988654 4689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||.+.+ ..++.+
T Consensus 123 h~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~Pe~~~~-~~~~~~ 188 (266)
T cd05033 123 SEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEA-------------TYTTKGGKIPIRWTAPEAIAY-RKFTSA 188 (266)
T ss_pred HhCCcccCCCCcceEEEcCCCCEEECccchhhccccccc-------------ceeccCCCCCccccChhhhcc-CCCccc
Confidence 999999999999999999999999999999987631110 001112345678999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+||||||+++|+|++ ||......+..... . ....++.....++.+.+++.+||+.+|++||++.+++++
T Consensus 189 ~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~ 261 (266)
T cd05033 189 SDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAV-E-DGYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVST 261 (266)
T ss_pred cchHHHHHHHHHHHccCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999985 67555444333222 2 222223334567899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment |
| >cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-34 Score=321.04 Aligned_cols=250 Identities=20% Similarity=0.282 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
+.+|++.+.||+|+||.||+|.+..+ ++.||||+++... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~--- 79 (283)
T cd05091 4 LSTVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKA-EGPLREEFKHEAMMRSRLQHPNIVCLLGVVTK--- 79 (283)
T ss_pred HHHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCC-CHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcC---
Confidence 35688889999999999999998643 5789999987443 23345678899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCCC
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 491 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 491 (1170)
...+++++||++ ++|.+++... ..++
T Consensus 80 -------------------------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (283)
T cd05091 80 -------------------------------------EQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE 122 (283)
T ss_pred -------------------------------------CCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccC
Confidence 345789999997 5888887521 2478
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+..++.++.|++.||+|||++||+||||||+|||+++++.+||+|||+++........ .......++
T Consensus 123 ~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~ 189 (283)
T cd05091 123 PADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYY-------------KLMGNSLLP 189 (283)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchhe-------------eeccCccCC
Confidence 8889999999999999999999999999999999999999999999998865322100 011223567
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
+.|+|||++.+ ..++.++|||||||++|||++ ||......+....+.. ...++.....++.+.+|+.+||+.+
T Consensus 190 ~~y~aPE~~~~-~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~li~~cl~~~ 266 (283)
T cd05091 190 IRWMSPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRN--RQVLPCPDDCPAWVYTLMLECWNEF 266 (283)
T ss_pred ccccCHHHHhc-CCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHhCCC
Confidence 89999999876 568999999999999999986 6665555444333322 2233333456778999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+||++.+|++.
T Consensus 267 p~~RP~~~~i~~~ 279 (283)
T cd05091 267 PSRRPRFKDIHSR 279 (283)
T ss_pred cccCCCHHHHHHH
Confidence 9999999999874
|
Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly |
| >cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=313.66 Aligned_cols=245 Identities=24% Similarity=0.350 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|+++++||+|+||.||+|.+. ++..||+|.+..... ..+.+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYN-NSTKVAVKTLKPGTM---SVQAFLEEANLMKTLQHDKLVRLYAVVTK-------- 72 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEec-CCceEEEEEccCCch---hHHHHHHHHHHHHhCCCCCeeeEEEEEcC--------
Confidence 478999999999999999999976 667899998764322 34678999999999999999999987622
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|++|||++ ++|.+++... ..++...++.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH 120 (261)
T cd05072 73 --------------------------------EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE 120 (261)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 5999988653 45888999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++++||||||+||+++.++.+||+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 121 ~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 185 (261)
T cd05072 121 RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 185 (261)
T ss_pred HCCeeccccchhhEEecCCCcEEECCCccceecCCCce--------------eccCCCccceecCCHHHhcc-CCCChhh
Confidence 99999999999999999999999999999986432110 01122346778999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|+|++ ||............ . .....+.....+.++.+++.+||+.+|++||+++++++
T Consensus 186 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 256 (261)
T cd05072 186 DVWSFGILLYEIVTYGKIPYPGMSNSDVMSAL-Q-RGYRMPRMENCPDELYDIMKTCWKEKAEERPTFDYLQS 256 (261)
T ss_pred hhhhhHHHHHHHHccCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 99999999999996 66554443333322 2 22223333456778999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa |
| >cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=308.97 Aligned_cols=250 Identities=29% Similarity=0.461 Sum_probs=208.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||+|++|.||++.+..+++.||+|.+............+.+|+.++++++|||++++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIET---------- 70 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEe----------
Confidence 5788999999999999999999899999999998665544556789999999999999999999987632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....|++|||+++ +|.+++.....+++..++.++.|++.||.|||++||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i 120 (254)
T cd06627 71 ------------------------------SDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGV 120 (254)
T ss_pred ------------------------------CCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCc
Confidence 3568999999975 899999888889999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.++|+|||++........ ......++..|+|||.+.+ ..++.++||||
T Consensus 121 ~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~~ 184 (254)
T cd06627 121 IHRDIKAANILTTKDGVVKLADFGVATKLNDVSK---------------DDASVVGTPYWMAPEVIEM-SGASTASDIWS 184 (254)
T ss_pred ccCCCCHHHEEECCCCCEEEeccccceecCCCcc---------------cccccccchhhcCHhhhcC-CCCCcchhHHH
Confidence 9999999999999999999999999986532210 0123468899999999887 44889999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+|+++|+|++ ||............. ....+......++.+.++|.+||+.+|++|||+.+++.|+||
T Consensus 185 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~ 254 (254)
T cd06627 185 LGCTVIELLTGNPPYYDLNPMAALFRIV--QDDHPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLKHPWI 254 (254)
T ss_pred HHHHHHHHHhCCCCCCCccHHHHHHHHh--ccCCCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence 9999999997 776555444333332 223333334556789999999999999999999999999986
|
Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast |
| >KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=334.52 Aligned_cols=262 Identities=27% Similarity=0.432 Sum_probs=225.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
-+.+++.+..||-|+||.|-++........+|+|++++... .....+.+..|-.+|..++.|.||++|-.|
T Consensus 418 ~l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTf-------- 489 (732)
T KOG0614|consen 418 KLSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTF-------- 489 (732)
T ss_pred chhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHh--------
Confidence 36788899999999999999999875555699999987653 344566789999999999999999999766
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeecc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.+..++|+.||-| +|.|+..++.++.|++..++.++..+++|++|||
T Consensus 490 --------------------------------rd~kyvYmLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH 537 (732)
T KOG0614|consen 490 --------------------------------RDSKYVYMLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLH 537 (732)
T ss_pred --------------------------------ccchhhhhhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHH
Confidence 3568899999999 6799999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|||+|||||+|+|++.+|.+||.|||+|+.+.... ..-++||||.|.|||++.. ...+.++
T Consensus 538 ~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~----------------KTwTFcGTpEYVAPEIILn-KGHD~av 600 (732)
T KOG0614|consen 538 RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR----------------KTWTFCGTPEYVAPEIILN-KGHDRAV 600 (732)
T ss_pred hcCceeccCChhheeeccCCceEEeehhhHHHhccCC----------------ceeeecCCcccccchhhhc-cCcchhh
Confidence 9999999999999999999999999999999875432 2346899999999999987 4579999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~ 662 (1170)
|.|||||++|||++ ||...+++..+..+++.-..+ ..+..+...+.+||+++...+|.+|.. +.+|-+|.|
T Consensus 601 DyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i-~~Pr~I~k~a~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~W 679 (732)
T KOG0614|consen 601 DYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKI-EFPRRITKTATDLIKKLCRDNPTERLGYQKGGINDIKKHRW 679 (732)
T ss_pred HHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhh-hcccccchhHHHHHHHHHhcCcHhhhccccCChHHHHhhhh
Confidence 99999999999996 999999888877776643221 122345568899999999999999985 899999999
Q ss_pred CCCchHHHHH
Q 001059 663 PPQMEYELLD 672 (1170)
Q Consensus 663 ~~~~~~~~~~ 672 (1170)
|.+..|+-+.
T Consensus 680 f~gfdweglr 689 (732)
T KOG0614|consen 680 FEGFDWEGLR 689 (732)
T ss_pred hhcCChhhhh
Confidence 9999987553
|
|
| >cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=317.29 Aligned_cols=252 Identities=26% Similarity=0.362 Sum_probs=191.8
Q ss_pred CCc-eEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDF-EELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y-~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++| ++++.||+|+||+||++.. ..++..||+|.++... .......+.+|+.+|+.++||||+++++++...
T Consensus 3 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 78 (283)
T cd05080 3 KRYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKREC-GQQNTSGWKKEINILKTLYHENIVKYKGCCSEQ--- 78 (283)
T ss_pred hhhceeceecccCCCcEEEEeeEccccCCCCceEEEEEecccc-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC---
Confidence 344 8899999999999988753 3568899999987542 223456788999999999999999999887432
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++|||++ ++|.+++.. ..+++.+++.++.|++.||+|
T Consensus 79 -----------------------------------~~~~~~lv~e~~~~~~l~~~~~~-~~l~~~~~~~i~~~l~~~l~~ 122 (283)
T cd05080 79 -----------------------------------GGKGLQLIMEYVPLGSLRDYLPK-HKLNLAQLLLFAQQICEGMAY 122 (283)
T ss_pred -----------------------------------CCceEEEEecCCCCCCHHHHHHH-cCCCHHHHHHHHHHHHHHHHH
Confidence 2346899999997 588888865 459999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++........ ........++..|+|||++.+ ..++.
T Consensus 123 lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~PE~~~~-~~~~~ 189 (283)
T cd05080 123 LHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEY------------YRVREDGDSPVFWYAVECLKE-NKFSY 189 (283)
T ss_pred HHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchh------------hccCCCCCCCceeeCHhHhcc-cCCCc
Confidence 99999999999999999999999999999999865321100 000122345678999999886 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHH-H------------HHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQ-I------------VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~-~------------~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
++|||||||++|||++ ||....... . ...........++.....++++.+++.+||+.+|++||
T Consensus 190 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp 269 (283)
T cd05080 190 ASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELLERGMRLPCPKNCPQEVYILMKNCWETEAKFRP 269 (283)
T ss_pred ccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccChhhCC
Confidence 9999999999999997 553221100 0 00000111122222344567999999999999999999
Q ss_pred CHHHHHh
Q 001059 653 SATELLQ 659 (1170)
Q Consensus 653 ta~eiL~ 659 (1170)
|++++++
T Consensus 270 s~~~i~~ 276 (283)
T cd05080 270 TFRSLIP 276 (283)
T ss_pred CHHHHHH
Confidence 9999986
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign |
| >cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=315.81 Aligned_cols=252 Identities=29% Similarity=0.453 Sum_probs=203.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
-|++.+.||.|+||.||+|.+..++..||||++..... ......+.+|+.+++.++||||++++++|..
T Consensus 5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------- 73 (277)
T cd06641 5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYVTKYYGSYLK---------- 73 (277)
T ss_pred hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc-hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEe----------
Confidence 47788999999999999999998999999999865432 2345678899999999999999999998743
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
..++|+||||+++ +|.+++.. ..+++..+..++.|++.|+.|||++|+
T Consensus 74 ------------------------------~~~~~lv~e~~~~~~l~~~i~~-~~~~~~~~~~~~~~l~~~l~~lh~~~i 122 (277)
T cd06641 74 ------------------------------DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHSEKK 122 (277)
T ss_pred ------------------------------CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHccCCe
Confidence 4568999999975 78877754 468999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+|+||||+||+++.++.++|+|||++..+.... .......|+..|+|||.+.+ ...+.++|+||
T Consensus 123 ~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv~s 186 (277)
T cd06641 123 IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDSKADIWS 186 (277)
T ss_pred ecCCCCHHhEEECCCCCEEEeecccceecccch---------------hhhccccCCccccChhhhcc-CCCCchhhHHH
Confidence 999999999999999999999999987543211 01123468899999999876 56788999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||++|+|++ ||...........+. ....+......+.++.++|.+||+.+|.+||++.++++|+|+.+..
T Consensus 187 lG~~l~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~ 260 (277)
T cd06641 187 LGITAIELAKGEPPHSELHPMKVLFLIP--KNNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA 260 (277)
T ss_pred HHHHHHHHHcCCCCCCccchHHHHHHHh--cCCCCCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence 9999999997 665444333322221 2222222334567899999999999999999999999999987654
|
Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int |
| >cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=313.19 Aligned_cols=245 Identities=24% Similarity=0.405 Sum_probs=194.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||+|+||.||+|.++ ++..+|+|++...... ...+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~-~~~~~~iK~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWR-GKIDVAIKMIREGAMS---EDDFIEEAKVMMKLSHPNLVQLYGVCTK--------- 70 (256)
T ss_pred HHcchhhhhccCCCceEEEeEec-CCccEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEEEEEEEEcC---------
Confidence 57889999999999999999987 5678999998643332 3468889999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++|||++ ++|.+++... ..+++..++.++.||+.||+|||++
T Consensus 71 -------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~ 119 (256)
T cd05059 71 -------------------------------QRPIFIVTEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESN 119 (256)
T ss_pred -------------------------------CCceEEEEecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999996 5899988753 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||+++....... .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~Pe~~~~-~~~~~~~Di 184 (256)
T cd05059 120 GFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY--------------TSSQGTKFPVKWAPPEVFDY-SRFSSKSDV 184 (256)
T ss_pred CcccccccHhhEEECCCCcEEECCcccceecccccc--------------cccCCCCCCccccCHHHhcc-CCCCchhhH
Confidence 999999999999999999999999999875432110 00111234568999999887 568999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||++|+|++ ||......+...... ....++.....++++.+++.+||+.+|.+|||+.++++.
T Consensus 185 ~slG~il~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~ 254 (256)
T cd05059 185 WSFGVLMWEVFSEGKMPYERFSNSEVVESVS--AGYRLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQ 254 (256)
T ss_pred HHHHHHHHHHhccCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 999999999986 665544443333222 222222334467799999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows |
| >cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-33 Score=322.13 Aligned_cols=252 Identities=25% Similarity=0.408 Sum_probs=203.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|+..+.||+|+||.||+|++..+|..||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 96 (317)
T cd06635 25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLR-------- 96 (317)
T ss_pred hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEee--------
Confidence 457888999999999999999998999999999875432 33344678899999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++|||++|+|.+.+.. ...+++..+..++.||+.||.|||++
T Consensus 97 --------------------------------~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~ 144 (317)
T cd06635 97 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH 144 (317)
T ss_pred --------------------------------CCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 346799999999988887754 45689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
||+||||+|+||+++.++.+||+|||++..... .....|++.|+|||++.+ ...++.++
T Consensus 145 ~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 205 (317)
T cd06635 145 NMIHRDIKAGNILLTEPGQVKLADFGSASIASP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 205 (317)
T ss_pred CcccCCCCcccEEECCCCCEEEecCCCccccCC-------------------cccccCCccccChhhhhcCCCCCCCccc
Confidence 999999999999999999999999999864321 123468899999998742 24588999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||++|||++ ||.............. ....+......++.+.++|.+||+.+|.+||++.++++|+|+...
T Consensus 206 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~ 283 (317)
T cd06635 206 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRE 283 (317)
T ss_pred cHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHh-ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhhhcc
Confidence 99999999999996 6665544443333332 222222233456789999999999999999999999999987554
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron |
| >cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=310.33 Aligned_cols=247 Identities=30% Similarity=0.554 Sum_probs=205.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|++.+.||.|+||.||++.++.+|+.||+|.+............+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 70 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLD---------- 70 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhcc----------
Confidence 5889999999999999999999999999999998655554556678899999999999999999877632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|++|||+++ +|.+++.. ...+++..++.++.|++.||+|||
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh 120 (256)
T cd08530 71 ------------------------------GNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH 120 (256)
T ss_pred ------------------------------CCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 3568999999975 89888865 356899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||+|+||+++.++.+||+|||++...... ......|++.|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~-----------------~~~~~~~~~~~~~Pe~~~~-~~~~~~~ 182 (256)
T cd08530 121 EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN-----------------MAKTQIGTPHYMAPEVWKG-RPYSYKS 182 (256)
T ss_pred hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC-----------------CcccccCCccccCHHHHCC-CCCCchh
Confidence 999999999999999999999999999999865321 0122468899999999987 5688999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|+||||+++|+|++ ||......+...... ....++.....+.++.++|.+||+.+|++||++.++++||+
T Consensus 183 D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~ 255 (256)
T cd08530 183 DIWSLGCLLYEMATFAPPFEARSMQDLRYKVQ--RGKYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILASPA 255 (256)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh--cCCCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcCCC
Confidence 99999999999986 776554443333222 33334333456678999999999999999999999999986
|
Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an |
| >cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=319.18 Aligned_cols=250 Identities=22% Similarity=0.342 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||++.++.. ...+|+|.+.... .......+.+|+.+++.+ +||||+++++++..
T Consensus 11 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 87 (293)
T cd05053 11 RDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA-TEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQ-- 87 (293)
T ss_pred HhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcC--
Confidence 36889999999999999999998743 3789999987432 333446788999999999 89999999988732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCC
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHF 490 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l 490 (1170)
...+|++|||++ ++|..++... ..+
T Consensus 88 --------------------------------------~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l 129 (293)
T cd05053 88 --------------------------------------EGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETL 129 (293)
T ss_pred --------------------------------------CCCeEEEEEeCCCCcHHHHHHhcCCCcccccccccccccccc
Confidence 345799999996 5999888542 358
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.+...... .......+
T Consensus 130 ~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~~ 196 (293)
T cd05053 130 TQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYY-------------RKTTNGRL 196 (293)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccce-------------eccCCCCC
Confidence 89999999999999999999999999999999999999999999999999865322110 01122245
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCC
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
+..|+|||++.+ ..++.++|||||||++|||++ ||......+.. ..+. ....+......++++.+|+.+||..
T Consensus 197 ~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~li~~~l~~ 273 (293)
T cd05053 197 PVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-KLLK-EGYRMEKPQNCTQELYHLMRDCWHE 273 (293)
T ss_pred CccccCHHHhcc-CCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHH-HHHH-cCCcCCCCCCCCHHHHHHHHHHccc
Confidence 678999999877 568999999999999999985 66544333322 2222 2223333445677899999999999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
||.+|||+.+++++
T Consensus 274 ~p~~Rps~~eil~~ 287 (293)
T cd05053 274 VPSQRPTFKQLVED 287 (293)
T ss_pred CcccCcCHHHHHHH
Confidence 99999999999975
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, |
| >cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-33 Score=314.70 Aligned_cols=248 Identities=27% Similarity=0.432 Sum_probs=196.5
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHH-HHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~i-L~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||.|+||.||+|.+..+|+.||+|+++..... ......+..|..+ ....+||||++++++|.+
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------------- 68 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQS------------- 68 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEc-------------
Confidence 5699999999999999999999999998644321 1222334455444 445589999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+|++|||++ ++|.+++.....+++..+..++.||+.||.|||++|++||
T Consensus 69 ---------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~ 121 (260)
T cd05611 69 ---------------------------KDYLYLVMEYLNGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHR 121 (260)
T ss_pred ---------------------------CCeEEEEEeccCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecC
Confidence 357899999996 5999999888889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||+|+||+++.++.+||+|||++..... .....|++.|+|||.+.+ ..++.++||||||+
T Consensus 122 dl~p~nil~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~~pe~~~~-~~~~~~~Dv~slG~ 181 (260)
T cd05611 122 DIKPENLLIDQTGHLKLTDFGLSRNGLE-------------------NKKFVGTPDYLAPETILG-VGDDKMSDWWSLGC 181 (260)
T ss_pred CCCHHHeEECCCCcEEEeecccceeccc-------------------cccCCCCcCccChhhhcC-CCCcchhhhHHHHH
Confidence 9999999999999999999999875321 123468889999999987 45899999999999
Q ss_pred HHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCchH
Q 001059 598 VFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQMEY 668 (1170)
Q Consensus 598 iL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~~ 668 (1170)
++|+|++ ||...................+. .....++++.++|.+||+.||++|| ++++++.|||+....+
T Consensus 182 il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~~~ 259 (260)
T cd05611 182 VIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSINW 259 (260)
T ss_pred HHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcCCC
Confidence 9999996 77655554443333222222232 2224677999999999999999999 5579999999977654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do |
| >PHA03390 pk1 serine/threonine-protein kinase 1; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.9e-34 Score=317.28 Aligned_cols=246 Identities=21% Similarity=0.353 Sum_probs=193.9
Q ss_pred ccCCceEEeee--ccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 353 YLNDFEELQPL--GHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 353 ~~~~y~~~~~L--G~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
+.++|++.+.+ |.|+||.||++.++.+|..+|+|.+....... .|+.....+ +||||++++++|..
T Consensus 12 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~-------~e~~~~~~~~~h~~iv~~~~~~~~---- 80 (267)
T PHA03390 12 FLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA-------IEPMVHQLMKDNPNFIKLYYSVTT---- 80 (267)
T ss_pred HHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch-------hhHHHHHHhhcCCCEEEEEEEEec----
Confidence 44667777766 99999999999999999999999987543221 122222222 79999999988743
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+||||++ ++|.+++.....+++.+++.++.||+.||.|
T Consensus 81 ------------------------------------~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~ 124 (267)
T PHA03390 81 ------------------------------------LKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALND 124 (267)
T ss_pred ------------------------------------CCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 347899999996 5999999887789999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
||+.|++||||||+||+++.++ .++|+|||++..... .....|++.|+|||++.+ ..++
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~-~~~~ 184 (267)
T PHA03390 125 LHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT-------------------PSCYDGTLDYFSPEKIKG-HNYD 184 (267)
T ss_pred HHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC-------------------CccCCCCCcccChhhhcC-CCCC
Confidence 9999999999999999999988 999999999875421 122468899999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc-CCCCCccccCCHHHHHHHHHccCCCCCCCCC-HHHHHhccC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GELPPSWVAKFSEQESLLRRLMSPSPSDRPS-ATELLQDAL 662 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~-~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-a~eiL~~~~ 662 (1170)
.++|||||||++|+|++ ||............+... ...++.+...++.+.+||.+||+.+|.+||+ ++++|+|+|
T Consensus 185 ~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~h~~ 264 (267)
T PHA03390 185 VSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIKHPF 264 (267)
T ss_pred chhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccCHHHHHHHHHHhccChhhCCchHHHHhcCCc
Confidence 99999999999999997 776433322211111111 1222333457789999999999999999996 699999999
Q ss_pred CCC
Q 001059 663 PPQ 665 (1170)
Q Consensus 663 ~~~ 665 (1170)
+.+
T Consensus 265 ~~~ 267 (267)
T PHA03390 265 LKI 267 (267)
T ss_pred ccC
Confidence 863
|
|
| >cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-33 Score=311.46 Aligned_cols=243 Identities=26% Similarity=0.364 Sum_probs=192.5
Q ss_pred eeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
++||+|+||.||+|.+..++ ..||+|.+...... .....+.+|+.+++.+.||||+++++++.
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA-AGKKEFLREASVMAQLDHPCIVRLIGVCK------------- 66 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccch-HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-------------
Confidence 46999999999999886554 78999998754433 44567899999999999999999998752
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
....+++|||++ ++|.+++.....+++..++.++.|++.||+|||+++++|
T Consensus 67 ----------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H 118 (257)
T cd05060 67 ----------------------------GEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVH 118 (257)
T ss_pred ----------------------------CCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeec
Confidence 234689999996 599999988778999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
|||||+|||++.++.+||+|||+++........ ........++..|+|||.+.+ ..++.++||||||
T Consensus 119 ~di~p~nili~~~~~~kl~df~~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG 185 (257)
T cd05060 119 RDLAARNVLLVNRHQAKISDFGMSRALGAGSDY------------YRATTAGRWPLKWYAPECINY-GKFSSKSDVWSYG 185 (257)
T ss_pred cCcccceEEEcCCCcEEeccccccceeecCCcc------------cccccCccccccccCHHHhcC-CCCCccchHHHHH
Confidence 999999999999999999999999865322100 001112235578999999877 5689999999999
Q ss_pred HHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 597 IVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 597 viL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|++|+|++ ||......+.... +. .....+.....++.+.++|.+||+.+|.+||++.++++.
T Consensus 186 ~~l~~~~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~ 251 (257)
T cd05060 186 VTLWEAFSYGAKPYGEMKGAEVIAM-LE-SGERLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELEST 251 (257)
T ss_pred HHHHHHHcCCCCCcccCCHHHHHHH-HH-cCCcCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999985 6655444333322 22 222223334566789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi |
| >cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=317.82 Aligned_cols=247 Identities=24% Similarity=0.357 Sum_probs=196.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++|.+.+.||.|+||+||++.+. .++..+|+|.+... .......+.+|+.++++++||||+++++++..
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDA--SDNARKDFHREAELLTNLQHEHIVKFYGVCVE---- 78 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCc--CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec----
Confidence 57899999999999999999863 34567999988642 33445678999999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------------CCCHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------------HFDKELA 495 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------------~l~e~~~ 495 (1170)
...+|++|||++ ++|.+++.... .+++..+
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~ 122 (288)
T cd05093 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQM 122 (288)
T ss_pred ------------------------------------CCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHH
Confidence 346799999997 58998886433 3899999
Q ss_pred HHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCC
Q 001059 496 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 575 (1170)
Q Consensus 496 ~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~ 575 (1170)
+.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........+++.|+
T Consensus 123 ~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~ 189 (288)
T cd05093 123 LHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPIRWM 189 (288)
T ss_pred HHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCce-------------eecCCCCCcccccc
Confidence 99999999999999999999999999999999999999999999985422110 01112345678999
Q ss_pred CcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 001059 576 APEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 576 APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
|||++.+ ..++.++|||||||++|+|++ ||...........+. .+..+......++++.+|+.+||+.||.+|
T Consensus 190 aPE~~~~-~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~R 266 (288)
T cd05093 190 PPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT--QGRVLQRPRTCPKEVYDLMLGCWQREPHMR 266 (288)
T ss_pred CHHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHccCChhhC
Confidence 9999987 568999999999999999986 565544444333332 222233333466799999999999999999
Q ss_pred CCHHHHHh
Q 001059 652 PSATELLQ 659 (1170)
Q Consensus 652 Pta~eiL~ 659 (1170)
||+.++++
T Consensus 267 pt~~~v~~ 274 (288)
T cd05093 267 LNIKEIHS 274 (288)
T ss_pred CCHHHHHH
Confidence 99999975
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly |
| >cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-33 Score=316.28 Aligned_cols=250 Identities=20% Similarity=0.291 Sum_probs=196.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.+.||+|+||.||+|.+.. ++..||+|.++.. ........+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~-~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--- 80 (277)
T cd05036 5 RDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPES-CSEQDESDFLMEALIMSKFNHQNIVRLIGVSFE--- 80 (277)
T ss_pred HHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc---
Confidence 3679999999999999999999986 6788999987643 223334578999999999999999999988743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------CCCHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFR 500 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~ 500 (1170)
....|++|||++ ++|.+++.... .+++..+..++.
T Consensus 81 -------------------------------------~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 123 (277)
T cd05036 81 -------------------------------------RLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCAR 123 (277)
T ss_pred -------------------------------------CCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHH
Confidence 234689999996 59999886543 488999999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
||+.||+|||+++++||||||+|||++.++ .+||+|||+++.+...... ........++.|+||
T Consensus 124 qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 190 (277)
T cd05036 124 DVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYY-------------RKGGRAMLPIKWMPP 190 (277)
T ss_pred HHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccce-------------ecCCCCCccHhhCCH
Confidence 999999999999999999999999998754 5999999999865221100 001122345689999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|++.+ ..++.++|||||||++|||++ ||.............. . ..+......++.+.+++.+||+.+|++||+
T Consensus 191 E~~~~-~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps 267 (277)
T cd05036 191 EAFLD-GIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTG-G-GRLDPPKGCPGPVYRIMTDCWQHTPEDRPN 267 (277)
T ss_pred HHHhc-CCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc-C-CcCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 99987 568999999999999999985 7765544433322221 1 122223455678999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.++++|
T Consensus 268 ~~~vl~~ 274 (277)
T cd05036 268 FATILER 274 (277)
T ss_pred HHHHHHH
Confidence 9999987
|
Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well |
| >cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=319.99 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=194.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC--------------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEE
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDG--------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 420 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg--------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~ 420 (1170)
++|++.+.||+|+||.||+|++..++ ..||+|.++.. ........+.+|+.++++++||||++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~i~~~~ 83 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRAD-VTKTARNDFLKEIKIMSRLKNPNIIRLL 83 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCcCeEE
Confidence 58999999999999999999876432 35899998643 3334456789999999999999999999
Q ss_pred EEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-----------
Q 001059 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------- 488 (1170)
Q Consensus 421 ~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------- 488 (1170)
+++.. ...+|++||||+ ++|.+++....
T Consensus 84 ~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~ 123 (295)
T cd05097 84 GVCVS----------------------------------------DDPLCMITEYMENGDLNQFLSQREIESTFTHANNI 123 (295)
T ss_pred EEEcC----------------------------------------CCccEEEEecCCCCcHHHHHHhccccccccccccC
Confidence 88732 345799999997 58998885432
Q ss_pred -CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcc
Q 001059 489 -HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 567 (1170)
Q Consensus 489 -~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (1170)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++........ ......
T Consensus 124 ~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~ 190 (295)
T cd05097 124 PSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDY-------------YRIQGR 190 (295)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcc-------------eeccCc
Confidence 367888999999999999999999999999999999999999999999999975421110 011122
Q ss_pred cccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-----CCCchhHHHHHHHHh---hh--cCCCCCccccCCHHHH
Q 001059 568 QVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQE 637 (1170)
Q Consensus 568 ~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~l---~~--~~~~p~~~~~~~~e~~ 637 (1170)
..+++.|+|||++.+ ..++.++|||||||++|+|++ ||......+...... .. ...........++.+.
T Consensus 191 ~~~~~~y~aPE~~~~-~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 269 (295)
T cd05097 191 AVLPIRWMAWESILL-GKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGEFFRNQGRQIYLSQTPLCPSPVF 269 (295)
T ss_pred CcCceeecChhhhcc-CCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHHhhhhccccccCCCCCCCCHHHH
Confidence 356789999999877 568999999999999999985 776544433322211 11 1111222334567899
Q ss_pred HHHHHccCCCCCCCCCHHHHHhc
Q 001059 638 SLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+||.+||+.||.+||++++|++.
T Consensus 270 ~li~~~l~~~p~~RPs~~~i~~~ 292 (295)
T cd05097 270 KLMMRCWSRDIKDRPTFNKIHHF 292 (295)
T ss_pred HHHHHHcCCCchhCcCHHHHHHH
Confidence 99999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including |
| >cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.8e-34 Score=329.26 Aligned_cols=251 Identities=24% Similarity=0.333 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
++|++.+.||+|+||.||+|.+. .+++.||||+++... .......+.+|+.+|.++ +||||++++++|...
T Consensus 7 ~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~-- 83 (343)
T cd05103 7 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGA-THSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 83 (343)
T ss_pred hHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCC-ChHHHHHHHHHHHHHHhccCCccHhhhcceeecC--
Confidence 57999999999999999999853 467899999997443 233456788999999999 789999999887432
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 487 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 487 (1170)
...++++||||+ |+|.+++...
T Consensus 84 -------------------------------------~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~ 126 (343)
T cd05103 84 -------------------------------------GGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSG 126 (343)
T ss_pred -------------------------------------CCceEEEEeccCCCcHHHHHHhcCCcccccccccccccccccc
Confidence 345789999997 5898887542
Q ss_pred -----------------------------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 488 -----------------------------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 488 -----------------------------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
..++...+..++.||+.||+|||++||+|||||
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dik 206 (343)
T cd05103 127 YGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLA 206 (343)
T ss_pred ccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCc
Confidence 136777888999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+|||++.++.+||+|||+++....... ........+++.|+|||++.+ ..++.++|||||||++|
T Consensus 207 p~Nil~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~ 272 (343)
T cd05103 207 ARNILLSENNVVKICDFGLARDIYKDPD-------------YVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 272 (343)
T ss_pred cCeEEEcCCCcEEEEecccccccccCcc-------------hhhcCCCCCCcceECcHHhcC-CCCCchhhHHHHHHHHH
Confidence 9999999999999999999986421110 001112346678999999877 56899999999999999
Q ss_pred Hhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 601 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 601 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|++ ||............+. .+..++.....++++.+++.+||+.||.+|||+.++++|
T Consensus 273 el~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~ 335 (343)
T cd05103 273 EIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 335 (343)
T ss_pred HHHHCCCCCCCCccccHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9985 6654332222222222 222222223356789999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp |
| >cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-33 Score=318.19 Aligned_cols=258 Identities=28% Similarity=0.419 Sum_probs=202.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||.|+||.||+|.+..+|+.||||.++..... .....+.+|+.++... .||||+++++++.+
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~------- 85 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK-EENKRILMDLDVVLKSHDCPYIVKCYGYFIT------- 85 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh-HHHHHHHHHHHHHHhccCCCchHhhheeeec-------
Confidence 57899999999999999999999988999999999754332 2345677788777666 49999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||+++++.+++.. ...+++..+..++.||+.||+|||+
T Consensus 86 ---------------------------------~~~~~~v~e~~~~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~ 132 (296)
T cd06618 86 ---------------------------------DSDVFICMELMSTCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE 132 (296)
T ss_pred ---------------------------------CCeEEEEeeccCcCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999999888777755 4568999999999999999999997
Q ss_pred -CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---CCCC
Q 001059 512 -QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---PKID 587 (1170)
Q Consensus 512 -~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~~~~ 587 (1170)
+||+||||+|+||+++.++.+||+|||++..+.... ......+++.|+|||.+.+. +.++
T Consensus 133 ~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 196 (296)
T cd06618 133 KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK----------------AKTRSAGCAAYMAPERIDPPDPNPKYD 196 (296)
T ss_pred hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC----------------cccCCCCCccccCHhhcCCCCCccccc
Confidence 599999999999999999999999999987643211 01223578899999998763 2378
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHH-HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMER-QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++||||||+++|+|++ ||...... +.............+.....+.++.+||.+||+.||.+||++.++++|+|+
T Consensus 197 ~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~ 276 (296)
T cd06618 197 IRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSLPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFI 276 (296)
T ss_pred cchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhh
Confidence 89999999999999997 76543222 222222222211112222456789999999999999999999999999998
Q ss_pred CCchH
Q 001059 664 PQMEY 668 (1170)
Q Consensus 664 ~~~~~ 668 (1170)
.....
T Consensus 277 ~~~~~ 281 (296)
T cd06618 277 RRYET 281 (296)
T ss_pred hccch
Confidence 77543
|
Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it |
| >cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-34 Score=321.09 Aligned_cols=252 Identities=28% Similarity=0.439 Sum_probs=201.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+..+.||+|+||.||+|.+..+|..||+|.++.... ......+.+|+.+++.++||||+++++++.
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------- 72 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA-EDEIEDIQQEITVLSQCDSPYITRYYGSYL---------- 72 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc-hHHHHHHHHHHHHHHcCCCCccHhhhcccc----------
Confidence 356777899999999999999998999999999875433 234567899999999999999999998763
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||++|
T Consensus 73 ------------------------------~~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~ 121 (277)
T cd06642 73 ------------------------------KGTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSER 121 (277)
T ss_pred ------------------------------cCCceEEEEEccCCCcHHHHhhc-CCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 23568999999975 88887754 56899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++|+||+|+||+++.++.++|+|||++..+.... .......|+..|+|||++.+ ..++.++|+|
T Consensus 122 ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Dv~ 185 (277)
T cd06642 122 KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDFKADIW 185 (277)
T ss_pred eeccCCChheEEEeCCCCEEEccccccccccCcc---------------hhhhcccCcccccCHHHhCc-CCCchhhhHH
Confidence 9999999999999999999999999997653211 01123468899999999987 5688999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|||++ ||............ . ....+......+.++.++|.+||+.+|++||++.++++|+|+...
T Consensus 186 slG~il~el~tg~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~ 259 (277)
T cd06642 186 SLGITAIELAKGEPPNSDLHPMRVLFLI-P-KNSPPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRY 259 (277)
T ss_pred HHHHHHHHHHhCCCCCcccchhhHHhhh-h-cCCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHhHHHHHH
Confidence 99999999997 55433332222211 1 122222223455688999999999999999999999999987654
|
Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 |
| >cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-33 Score=319.52 Aligned_cols=246 Identities=22% Similarity=0.315 Sum_probs=194.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc--EEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||+|+||.||+|.++.+|. .+++|.++. .......+.+.+|+.+++++ +||||+++++++.+
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~-~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~------ 74 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKE-FASENDHRDFAGELEVLCKLGHHPNIINLLGACEN------ 74 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccc-cCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEcc------
Confidence 689999999999999999999987765 468887763 22333456789999999999 79999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCCHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKEL 494 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~~ 494 (1170)
...+|++|||++ ++|.+++.... .+++..
T Consensus 75 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~ 120 (297)
T cd05089 75 ----------------------------------RGYLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQ 120 (297)
T ss_pred ----------------------------------CCcceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHH
Confidence 345799999997 59999886532 478899
Q ss_pred HHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccC
Q 001059 495 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574 (1170)
Q Consensus 495 ~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 574 (1170)
++.++.||+.||+|||++||+||||||+|||++.++.+||+|||++...... ........+..|
T Consensus 121 ~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~----------------~~~~~~~~~~~y 184 (297)
T cd05089 121 LLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGLSRGEEVY----------------VKKTMGRLPVRW 184 (297)
T ss_pred HHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCCCccccce----------------eccCCCCcCccc
Confidence 9999999999999999999999999999999999999999999998642110 001112335679
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
+|||++.+ ..++.++|||||||++|||++ ||......+....... +..++.....++.+.+||.+||+.+|.+
T Consensus 185 ~aPE~~~~-~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~ 261 (297)
T cd05089 185 MAIESLNY-SVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ--GYRMEKPRNCDDEVYELMRQCWRDRPYE 261 (297)
T ss_pred cCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc--CCCCCCCCCCCHHHHHHHHHHcCCChhh
Confidence 99999877 568999999999999999985 7765555444333322 2222233346678999999999999999
Q ss_pred CCCHHHHHhc
Q 001059 651 RPSATELLQD 660 (1170)
Q Consensus 651 RPta~eiL~~ 660 (1170)
|||++++++.
T Consensus 262 Rp~~~~i~~~ 271 (297)
T cd05089 262 RPPFAQISVQ 271 (297)
T ss_pred CcCHHHHHHH
Confidence 9999999875
|
Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations. |
| >cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=316.78 Aligned_cols=248 Identities=29% Similarity=0.408 Sum_probs=197.6
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||+|+||+||+|.+..+|+.||+|++...... ......+.+|+.+|+.++||||+++++++..
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------------- 64 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFET---------------- 64 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEec----------------
Confidence 69999999999999999999999998754322 2234456789999999999999999987732
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
...+|++|||++ ++|.+++.... .+++..++.++.|++.||.|||++|++|||
T Consensus 65 ------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~d 120 (277)
T cd05577 65 ------------------------KDDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRD 120 (277)
T ss_pred ------------------------CCeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCC
Confidence 356899999997 59999887655 699999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+||+++.++.+||+|||++....... ......++..|+|||++.+ ..++.++|||||||+
T Consensus 121 i~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 183 (277)
T cd05577 121 LKPENVLLDDHGNVRISDLGLAVELKGGK----------------KIKGRAGTPGYMAPEVLQG-EVYDFSVDWFALGCT 183 (277)
T ss_pred CCHHHEEECCCCCEEEccCcchhhhccCC----------------ccccccCCCCcCCHHHhcC-CCCCchhhhHHHHHH
Confidence 99999999999999999999987643210 1123467889999999887 458999999999999
Q ss_pred HHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCCCCch
Q 001059 599 FFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALPPQME 667 (1170)
Q Consensus 599 L~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~~~~~ 667 (1170)
+|+|++ ||..... ......... ..........++++.++|++||+.||.+|| ++.++++|||+....
T Consensus 184 l~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~~ 261 (277)
T cd05577 184 LYEMIAGRSPFRQRKEKVEKEELKRRTL--EMAVEYPDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDLN 261 (277)
T ss_pred HHHHhhCCCCCCCCcccccHHHHHhccc--cccccCCccCCHHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcCC
Confidence 999996 7754332 111111111 111122234567899999999999999999 899999999998776
Q ss_pred HH
Q 001059 668 YE 669 (1170)
Q Consensus 668 ~~ 669 (1170)
+.
T Consensus 262 ~~ 263 (277)
T cd05577 262 WR 263 (277)
T ss_pred hh
Confidence 54
|
Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of |
| >cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=315.87 Aligned_cols=265 Identities=28% Similarity=0.436 Sum_probs=208.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~ 432 (1170)
++|.+.+.||.|+||.||+|.++.+|+.||+|++..... .......+.+|+.++++++ ||||+++++++.
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~-------- 72 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQ-------- 72 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhc--------
Confidence 479999999999999999999999999999999875332 2334467889999999998 999999987652
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeecc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....+|++|||+ +++|.+++.....+++..++.++.|++.||.|||+
T Consensus 73 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~ 120 (280)
T cd05581 73 --------------------------------DEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHS 120 (280)
T ss_pred --------------------------------CCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 235689999999 57999999988889999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCC-----CCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF-----PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|++|+||||+||+++.++.++|+|||++.............. ...............|+..|+|||++.+ ..+
T Consensus 121 ~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~ 199 (280)
T cd05581 121 KGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNE-KPA 199 (280)
T ss_pred CCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCC-CCC
Confidence 9999999999999999999999999999987643221100000 0000000112234568899999999887 458
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHh
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~ 659 (1170)
+.++||||||+++|++++ ||..................+|. ..++.+.++|.+||+.+|.+||++ .++++
T Consensus 200 ~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 200 GKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFPP---NFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred ChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhcCCCCCC---ccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 899999999999999997 66655443333333322333333 336789999999999999999999 99999
Q ss_pred ccCC
Q 001059 660 DALP 663 (1170)
Q Consensus 660 ~~~~ 663 (1170)
|+||
T Consensus 277 ~~~~ 280 (280)
T cd05581 277 HPFF 280 (280)
T ss_pred CCCC
Confidence 9997
|
Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto |
| >cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-33 Score=311.84 Aligned_cols=242 Identities=22% Similarity=0.326 Sum_probs=189.8
Q ss_pred eeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
.||+|+||.||+|.+. .++..||+|++.... .....+.+.+|+.+++.++||||+++++++.
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~-~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~--------------- 65 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN-EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE--------------- 65 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEccccc-ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc---------------
Confidence 4899999999999875 345679999986442 3344567899999999999999999998761
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+++||||++ ++|.+++.. ...+++..++.++.||+.||+|||++|++||
T Consensus 66 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~ 119 (257)
T cd05115 66 --------------------------AEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHR 119 (257)
T ss_pred --------------------------CCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeec
Confidence 234689999997 589988874 4569999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||++........ .....+...+++.|+|||++.+ ..++.++|||||||
T Consensus 120 dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~ 186 (257)
T cd05115 120 DLAARNVLLVNQHYAKISDFGLSKALGADDS------------YYKARSAGKWPLKWYAPECINF-RKFSSRSDVWSYGI 186 (257)
T ss_pred ccchheEEEcCCCcEEeccCCccccccCCcc------------ceeccCCCCCCcccCCHHHHcc-CCCCchhhHHHHHH
Confidence 9999999999999999999999975432110 0011122334678999999886 56899999999999
Q ss_pred HHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 598 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 598 iL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||++ ||.......... .+. .+..+......++++.++|.+||+.||++||++.++.+.
T Consensus 187 ~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~ 251 (257)
T cd05115 187 TMWEAFSYGQKPYKKMKGPEVMS-FIE-QGKRLDCPAECPPEMYALMKDCWIYKWEDRPNFAKVEER 251 (257)
T ss_pred HHHHHhcCCCCCcCcCCHHHHHH-HHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999984 776554444332 222 222333334567899999999999999999999999764
|
Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho |
| >KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=364.46 Aligned_cols=253 Identities=31% Similarity=0.449 Sum_probs=208.9
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
...||.|.||.||-|.+..+|...|+|-|+...........+.+|..+|..++|||+|+|||+=.
T Consensus 1240 g~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEv--------------- 1304 (1509)
T KOG4645|consen 1240 GNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEV--------------- 1304 (1509)
T ss_pred ccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceee---------------
Confidence 46799999999999999999999999999876655555667889999999999999999997632
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....++|.||||. |+|.+++...+..++.....|..|++.|++|||++||||||
T Consensus 1305 -------------------------HRekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRD 1359 (1509)
T KOG4645|consen 1305 -------------------------HREKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRD 1359 (1509)
T ss_pred -------------------------cHHHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecC
Confidence 3456789999996 69999998888889999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--CCCccchhHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADMYSLG 596 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~~~ksDIwSlG 596 (1170)
|||+|||++.+|.+|++|||.|..+..+.. +....-.+.+|||.|||||++.+.. ....++||||+|
T Consensus 1360 IK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~-----------~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslG 1428 (1509)
T KOG4645|consen 1360 IKPANILLDFNGLIKYGDFGSAVKIKNNAQ-----------TMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLG 1428 (1509)
T ss_pred CCccceeeecCCcEEeecccceeEecCchh-----------cCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhccc
Confidence 999999999999999999999997754310 1111234679999999999998732 256799999999
Q ss_pred HHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 597 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|+..||+| ||...+..=..+..+. -+..|+.+...+++-++||.+||..||++|.++.|++.|.|-+
T Consensus 1429 CVVlEM~tGkrPW~~~dne~aIMy~V~-~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~ 1498 (1509)
T KOG4645|consen 1429 CVVLEMATGKRPWAELDNEWAIMYHVA-AGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGK 1498 (1509)
T ss_pred ceEEEeecCCCchhhccchhHHHhHHh-ccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccc
Confidence 99999998 7766554433333332 3444555555788999999999999999999999999997644
|
|
| >cd05122 PKc_STE Catalytic domain of STE family Protein Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.4e-33 Score=305.60 Aligned_cols=248 Identities=30% Similarity=0.546 Sum_probs=201.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+|+..+.||.|++|.||++.+..+|+.+++|++..... .....+.+|+..++.++||||+++++++..
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~---------- 68 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK--EKKEKIINEIQILKKCKHPNIVKYYGSYLK---------- 68 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch--hHHHHHHHHHHHHHhCCCCCEeEEEEEEec----------
Confidence 58889999999999999999998999999999875433 345688999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....++++||++ ++|.+++... ..+++..++.++.|++.||+|||++|
T Consensus 69 ------------------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~ 118 (253)
T cd05122 69 ------------------------------KDELWIVMEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNG 118 (253)
T ss_pred ------------------------------CCeEEEEEecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCC
Confidence 246799999998 5999988775 57999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++||||+|+||+++.++.++|+|||++........ .....|+..|+|||.+.+ ..++.++|||
T Consensus 119 i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~----------------~~~~~~~~~~~~PE~~~~-~~~~~~~Dv~ 181 (253)
T cd05122 119 IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA----------------RNTMVGTPYWMAPEVING-KPYDYKADIW 181 (253)
T ss_pred EecCCCCHHHEEEccCCeEEEeecccccccccccc----------------ccceecCCcccCHHHHcC-CCCCccccHH
Confidence 99999999999999999999999999986532210 123468899999999987 4588999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
|||+++|+|++ ||....................+.....+..+.++|.+||+.||.+|||+.++++|||
T Consensus 182 slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~~~~ 253 (253)
T cd05122 182 SLGITAIELAEGKPPYSELPPMKALFKIATNGPPGLRNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLKHPF 253 (253)
T ss_pred HHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCcCcccccCHHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence 99999999997 6665433333222222111111111222578999999999999999999999999997
|
Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core |
| >cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-33 Score=317.15 Aligned_cols=255 Identities=25% Similarity=0.452 Sum_probs=208.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.+.|+..+.||.|+||.||+|.+..++..||+|++..... ....+.+|+..++.++||||+++++++..
T Consensus 18 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 86 (286)
T cd06614 18 RELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ---NKELIINEILIMKDCKHPNIVDYYDSYLV-------- 86 (286)
T ss_pred cccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch---hHHHHHHHHHHHHHCCCCCeeEEEEEEEE--------
Confidence 3578888999999999999999998999999999975433 45678899999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|+++||++ ++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 87 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~ 134 (286)
T cd06614 87 --------------------------------GDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHS 134 (286)
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999998 69999998776 89999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|++|+||||+||+++.++.++|+|||++........ ......+++.|+|||++.+ ..++.++|
T Consensus 135 ~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~y~~PE~~~~-~~~~~~~D 198 (286)
T cd06614 135 QNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS---------------KRNSVVGTPYWMAPEVIKR-KDYGPKVD 198 (286)
T ss_pred CCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh---------------hhccccCCcccCCHhHhcC-CCCCCccc
Confidence 9999999999999999999999999999875432110 1123457889999999887 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+|||||++|+|++ ||...........+..............+.++.++|++||+.+|.+||++.++++|+|+.+.+
T Consensus 199 v~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~ 277 (286)
T cd06614 199 IWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIPPLKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKAC 277 (286)
T ss_pred cHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCcchhhCCHHHHHHHHHHhccChhhCcCHHHHhhChHhhccC
Confidence 9999999999997 666554443333322211111112223567899999999999999999999999999998854
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou |
| >cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-33 Score=309.37 Aligned_cols=243 Identities=25% Similarity=0.348 Sum_probs=198.1
Q ss_pred eeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.||+|+||.||+|.+... +..||+|.++...... ....+.+|+..++.++||||+++++++..
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~-~~~~~~~e~~~l~~~~~~~i~~~~~~~~~------------ 67 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE-ERKDFLKEARVMKKLGHPNVVRLLGVCTE------------ 67 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh-HHHHHHHHHHHHhhcCCCChheeeeeecC------------
Confidence 4699999999999999866 8999999997544332 45788999999999999999999987732
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---------CCCCHHHHHHHHHHHHHHHH
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...++++|||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 68 ----------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~ 119 (262)
T cd00192 68 ----------------------------EEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGME 119 (262)
T ss_pred ----------------------------CCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHH
Confidence 356799999995 6999999875 67999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|++||||||+||+++.++.+||+|||.+........ ........+++.|+|||.+.+ ..++
T Consensus 120 ~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~ 185 (262)
T cd00192 120 YLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDY-------------YRKKTGGKLPIRWMAPESLKD-GIFT 185 (262)
T ss_pred HHHcCCcccCccCcceEEECCCCcEEEcccccccccccccc-------------cccccCCCcCccccCHHHhcc-CCcc
Confidence 99999999999999999999999999999999986532210 011234567899999999887 4689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|+|++ ||......+....... ...+......++++.+++.+||+.+|.+|||+.+++++
T Consensus 186 ~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~ 260 (262)
T cd00192 186 SKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK--GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVER 260 (262)
T ss_pred hhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc--CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 99999999999999985 6665544443333322 22333334557899999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan |
| >cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=316.13 Aligned_cols=252 Identities=30% Similarity=0.486 Sum_probs=201.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|+..+.||+|+||.||+|.+..+++.||+|++............+.+|+.+++.++||||+++++++.+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~----------- 69 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHT----------- 69 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhc-----------
Confidence 567889999999999999999999999999998654334445678899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
...+|++|||++++|.+++... ..+++..++.++.|++.||+|||++||+
T Consensus 70 -----------------------------~~~~~~v~e~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (282)
T cd07829 70 -----------------------------ERKLYLVFEYCDMDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRIL 120 (282)
T ss_pred -----------------------------CCceEEEecCcCcCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcc
Confidence 3568999999999999999876 5799999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||+|+||+++.++.+||+|||+++...... .......++..|+|||.+.+...++.++|||||
T Consensus 121 H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~---------------~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~sl 185 (282)
T cd07829 121 HRDLKPQNILINRDGVLKLADFGLARAFGIPL---------------RTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSV 185 (282)
T ss_pred cCCCChheEEEcCCCCEEEecCCcccccCCCc---------------cccCccccCcCcCChHHhcCCcCCCccccHHHH
Confidence 99999999999999999999999998643211 011234567889999998774478999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhh------------------cCCCC--------CccccCCHHHHHHHHHccCC
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQ------------------KGELP--------PSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~------------------~~~~p--------~~~~~~~~e~~~LI~~~L~~ 646 (1170)
||++|||++ ||...........+... ....+ ......++.+.++|++||..
T Consensus 186 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~ 265 (282)
T cd07829 186 GCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQY 265 (282)
T ss_pred HHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhcccccccccccccCccchHHhcccccHHHHHHHHHhhcc
Confidence 999999997 56544332222211110 00000 11123356789999999999
Q ss_pred CCCCCCCHHHHHhccCC
Q 001059 647 SPSDRPSATELLQDALP 663 (1170)
Q Consensus 647 dP~~RPta~eiL~~~~~ 663 (1170)
||.+||++.+++.||||
T Consensus 266 ~P~~Rp~~~~~l~~p~~ 282 (282)
T cd07829 266 NPAKRISAKEALKHPYF 282 (282)
T ss_pred CcccCCCHHHHhhCcCC
Confidence 99999999999999997
|
Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the |
| >cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-33 Score=316.75 Aligned_cols=252 Identities=24% Similarity=0.395 Sum_probs=195.0
Q ss_pred CceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
-|++++.||+|+||.||+|++ +.++..||+|.++... .......+.+|+.+++.++||||+++++++...
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~----- 78 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED----- 78 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccc-cHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecC-----
Confidence 468899999999999999985 4568899999986432 334456789999999999999999999887431
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|++|||++ ++|.+++.+. ..+++..++.++.||+.||+||
T Consensus 79 ---------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~l 125 (284)
T cd05079 79 ---------------------------------GGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYL 125 (284)
T ss_pred ---------------------------------CCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 1345799999996 5899988654 3589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+|||++.++.+||+|||+++.+...... ........++..|+|||++.+ ..++.+
T Consensus 126 H~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~apE~~~~-~~~~~~ 192 (284)
T cd05079 126 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEY------------YTVKDDLDSPVFWYAPECLIQ-SKFYIA 192 (284)
T ss_pred HHCCeeecccchheEEEcCCCCEEECCCccccccccCccc------------eeecCCCCCCccccCHHHhcc-CCCCcc
Confidence 9999999999999999999999999999999865321100 001123457788999999877 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchh--------------HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 001059 590 ADMYSLGIVFFELWH---PFSTAM--------------ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~--------------~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
+|||||||++|||++ |+.... .......... .+...+.+...++.+.+||.+||+.||.+||
T Consensus 193 ~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp 271 (284)
T cd05079 193 SDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRVLE-EGKRLPRPPNCPEEVYQLMRKCWEFQPSKRT 271 (284)
T ss_pred ccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHHHH-cCccCCCCCCCCHHHHHHHHHHccCCcccCc
Confidence 999999999999986 221110 0011111111 2223333455678999999999999999999
Q ss_pred CHHHHHhc
Q 001059 653 SATELLQD 660 (1170)
Q Consensus 653 ta~eiL~~ 660 (1170)
|+.+++++
T Consensus 272 t~~~il~~ 279 (284)
T cd05079 272 TFQNLIEG 279 (284)
T ss_pred CHHHHHHH
Confidence 99999875
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a |
| >cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=316.38 Aligned_cols=252 Identities=27% Similarity=0.459 Sum_probs=202.0
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++.+.||.|++|.||+|.+..+|+.+|+|.++...........+.+|+.+|+.++||||+++++.+.
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~------------ 68 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFR------------ 68 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhc------------
Confidence 56788999999999999999989999999998765544445567889999999999999999987762
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
....+|++|||++++|.+.+... ..+++..++.++.||+.||.|||++||+
T Consensus 69 ----------------------------~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~ 120 (283)
T cd05118 69 ----------------------------HKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGIL 120 (283)
T ss_pred ----------------------------cCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCee
Confidence 23568999999999998888764 5799999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
|+||||+||+++.++.+||+|||.+....... .......++..|+|||.+.+...++.++|||||
T Consensus 121 H~dl~p~nili~~~~~~~l~df~~~~~~~~~~---------------~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~sl 185 (283)
T cd05118 121 HRDLKPENLLINTEGVLKLADFGLARSFGSPV---------------RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSV 185 (283)
T ss_pred ecCcCHHHEEECCCCcEEEeeeeeeEecCCCc---------------ccccCccCcccccCcHHHhcCCCCCchhHHHHH
Confidence 99999999999999999999999997653221 011234688899999998875468999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHHHHHhhhcCC---------------------------CCCccccCCHHHHHHHHHccC
Q 001059 596 GIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------------LPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~~~~l~~~~~---------------------------~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
|+++|+|++ ||......+.........+. .+......+.++.++|.+||+
T Consensus 186 G~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~ 265 (283)
T cd05118 186 GCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLH 265 (283)
T ss_pred HHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhc
Confidence 999999997 56443332222211111000 001122356688999999999
Q ss_pred CCCCCCCCHHHHHhccCC
Q 001059 646 PSPSDRPSATELLQDALP 663 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~~~~ 663 (1170)
.||.+||++.+++.|||+
T Consensus 266 ~~P~~Rp~~~~ll~~~~~ 283 (283)
T cd05118 266 YDPHKRITAEQALAHPYF 283 (283)
T ss_pred cCcccCcCHHHHhhCCCC
Confidence 999999999999999996
|
Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They |
| >cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=320.22 Aligned_cols=255 Identities=23% Similarity=0.398 Sum_probs=204.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||.||++.+..+++.||+|.+..... ...+.+.+|+.+++.++||||+++++.|..
T Consensus 18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~--~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~-------- 87 (293)
T cd06647 18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ--PKKELIINEILVMRENKHPNIVNYLDSYLV-------- 87 (293)
T ss_pred hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc--hHHHHHHHHHHHHhhcCCCCeeehhheeee--------
Confidence 4789999999999999999999998999999999864332 234678899999999999999999987732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|+|+||++ ++|.+++.+ ..+++..+..++.|++.||.|||++
T Consensus 88 --------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~l~~~~~~~i~~~l~~al~~LH~~ 134 (293)
T cd06647 88 --------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSN 134 (293)
T ss_pred --------------------------------CCcEEEEEecCCCCcHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 346799999996 588888765 3588999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|++||||||+||+++.++.+||+|||++....... .......|++.|+|||.+.+ ..++.++|+
T Consensus 135 gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~Dv 198 (293)
T cd06647 135 QVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDI 198 (293)
T ss_pred CEeeccCCHHHEEEcCCCCEEEccCcceecccccc---------------cccccccCChhhcCchhhcc-CCCCchhhH
Confidence 99999999999999999999999999987543211 01123468999999999877 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||||++|+|++ ||..........................++.+.++|.+||..+|.+||++.+++.|+||....
T Consensus 199 ~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~ 276 (293)
T cd06647 199 WSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAK 276 (293)
T ss_pred HHHHHHHHHHHhCCCCCCCCChhhheeehhcCCCCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCc
Confidence 999999999997 776544333222111111111112233456889999999999999999999999999987654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi |
| >cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-33 Score=318.09 Aligned_cols=252 Identities=25% Similarity=0.415 Sum_probs=202.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+-|...++||.|+||+||+|++..+|..||+|++..... .......+.+|+.+++.++|||++++++++.+
T Consensus 21 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 92 (313)
T cd06633 21 EIFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLK-------- 92 (313)
T ss_pred HHhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEe--------
Confidence 346667889999999999999999999999999875433 22334578899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++||||++++.+.+.. ...+++..++.++.||+.||.|||++
T Consensus 93 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~ 140 (313)
T cd06633 93 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSH 140 (313)
T ss_pred --------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 356799999999998888765 45689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
|++||||||+||+++.++.+||+|||++.... ......|+..|+|||++.. ...++.++
T Consensus 141 gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~-------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~s 201 (313)
T cd06633 141 NMIHRDIKAGNILLTEPGQVKLADFGSASKSS-------------------PANSFVGTPYWMAPEVILAMDEGQYDGKV 201 (313)
T ss_pred CeecCCCChhhEEECCCCCEEEeecCCCcccC-------------------CCCCccccccccChhhccccCCCCCCchh
Confidence 99999999999999999999999999986321 0123468899999999852 24588899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||++|+|++ ||............... ..+. .....+..+++|+.+||+.+|.+||++.++++|+|+...
T Consensus 202 Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~ 279 (313)
T cd06633 202 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQN--DSPTLQSNEWTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRD 279 (313)
T ss_pred hHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc--CCCCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCC
Confidence 99999999999996 66555443333333221 1221 122345678999999999999999999999999999875
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 280 ~ 280 (313)
T cd06633 280 R 280 (313)
T ss_pred c
Confidence 4
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co |
| >cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=311.69 Aligned_cols=256 Identities=32% Similarity=0.494 Sum_probs=203.5
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||.|+||.||+|.+..+|+.||+|.+..... .......+.+|+.+++.++||||+++++.+.
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~----------------- 63 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQ----------------- 63 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhee-----------------
Confidence 6899999999999998999999999865432 2234567889999999999999999986652
Q ss_pred ccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
....+|++|||++ ++|.+++.+...+++..++.++.||+.||+|||++|++||||+
T Consensus 64 -----------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~ 120 (265)
T cd05579 64 -----------------------GKKNLYLVMEYLPGGDLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLK 120 (265)
T ss_pred -----------------------cCcEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCC
Confidence 2457899999996 5999999887789999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+||+++.++.++|+|||++.......... ............+++.|+|||.+.+ ..++.++||||||+++|
T Consensus 121 ~~nil~~~~~~~~l~dfg~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~Pe~~~~-~~~~~~~Dv~slG~~~~ 192 (265)
T cd05579 121 PDNILIDSNGHLKLTDFGLSKVGLVRRQIN-------LNDDEKEDKRIVGTPDYIAPEVILG-QGHSKTVDWWSLGCILY 192 (265)
T ss_pred HHHeEEcCCCCEEEEecccchhcccCcccc-------cccccccccCcccCccccCHHHhcC-CCCCcchhhHHHHHHHH
Confidence 999999999999999999988643211000 0000112234568899999999887 45889999999999999
Q ss_pred Hhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH---HHHHhccCCCCch
Q 001059 601 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALPPQME 667 (1170)
Q Consensus 601 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta---~eiL~~~~~~~~~ 667 (1170)
+|++ ||......+............+ .....++.+.++|++||+.+|.+|||+ .++++|+||....
T Consensus 193 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~~ 264 (265)
T cd05579 193 EFLVGIPPFHGETPEEIFQNILNGKIEWP-EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGID 264 (265)
T ss_pred HHHhCCCCCCCCCHHHHHHHHhcCCcCCC-ccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCCC
Confidence 9997 7766555554444333222222 222246789999999999999999999 9999999998654
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re |
| >cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=319.38 Aligned_cols=253 Identities=25% Similarity=0.402 Sum_probs=202.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|...+.||.|+||.||+|+++.++..+|+|.+.... .......++.+|+.+++.++|||++++++++..
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 86 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 86 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEc--------
Confidence 45777889999999999999999999999999987532 233344678899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|+||||+.+++.+.+.. ...+++..+..++.|++.||.|||++
T Consensus 87 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~ 134 (308)
T cd06634 87 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 134 (308)
T ss_pred --------------------------------CCeeEEEEEccCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356799999999988887754 44689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
+++||||||+||+++.++.+||+|||++..... .....|++.|+|||++.+ ...++.++
T Consensus 135 ~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 195 (308)
T cd06634 135 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANXFVGTPYWMAPEVILAMDEGQYDGKV 195 (308)
T ss_pred CcccCCCCHHhEEECCCCcEEECCcccceeecC-------------------cccccCCccccCHHHHhhcccCCCCccc
Confidence 999999999999999999999999999875421 123468899999998753 23578899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||||||++|+|++ ||.............. ...........+..+.+||++||+.+|.+||++.++++|+|+....
T Consensus 196 Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~ 274 (308)
T cd06634 196 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER 274 (308)
T ss_pred chHHHHHHHHHHHcCCCCCccccHHHHHHHHhh-cCCCCcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence 99999999999997 6655443333322222 1111112224556889999999999999999999999999987753
|
Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin |
| >cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-33 Score=309.38 Aligned_cols=244 Identities=23% Similarity=0.324 Sum_probs=194.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||+|.+. +++.||+|.++.... ..+.+.+|+.++++++||||+++++++..
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------- 72 (261)
T cd05068 6 TSIQLLRKLGAGQFGEVWEGLWN-NTTPVAVKTLKPGTM---DPKDFLAEAQIMKKLRHPKLIQLYAVCTL--------- 72 (261)
T ss_pred hheeeEEEecccCCccEEEEEec-CCeEEEEEeeCCCcc---cHHHHHHHHHHHHHCCCCCccceeEEEec---------
Confidence 57999999999999999999976 567899999864332 24568899999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||++ ++|.+++.... .+++..+..++.|++.||.|||+
T Consensus 73 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 121 (261)
T cd05068 73 -------------------------------EEPIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEA 121 (261)
T ss_pred -------------------------------CCCeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 345799999994 69999987644 68999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+||+++.++.+||+|||+++....... .......++..|+|||++.+ ..++.++|
T Consensus 122 ~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 186 (261)
T cd05068 122 QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY--------------EAREGAKFPIKWTAPEAALY-NRFSIKSD 186 (261)
T ss_pred CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc--------------cccCCCcCceeccCcccccc-CCCCchhh
Confidence 9999999999999999999999999999986531110 00111233468999999887 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||+++|||++ ||............ ..... ++.....+..+.+++.+||+.+|.+||++.++++
T Consensus 187 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~ 256 (261)
T cd05068 187 VWSFGILLTEIVTYGRMPYPGMTNAEVLQQV-DQGYR-MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQW 256 (261)
T ss_pred HHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-HcCCC-CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence 9999999999996 66654444333322 22222 2223355678999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a |
| >cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=315.45 Aligned_cols=249 Identities=20% Similarity=0.315 Sum_probs=196.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||.|+||.||+|.+.. ++..||+|++... ........+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~--- 79 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDHPNIVKLLGVCAV--- 79 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCC-cCHHHHHHHHHHHHHHHhcCCCchheEEEEEcC---
Confidence 3689999999999999999999753 6789999998643 233345678899999999999999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------- 488 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------- 488 (1170)
...+|++|||++ ++|.+++....
T Consensus 80 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 122 (288)
T cd05050 80 -------------------------------------GKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGL 122 (288)
T ss_pred -------------------------------------CCccEEEEecCCCCCHHHHHHHcCccccccccccccccccccc
Confidence 345799999997 59998886431
Q ss_pred ---CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 001059 489 ---HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565 (1170)
Q Consensus 489 ---~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1170)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.+||+|||++..+...... ...
T Consensus 123 ~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~ 189 (288)
T cd05050 123 NPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------KAS 189 (288)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccc-------------ccc
Confidence 3678889999999999999999999999999999999999999999999998754221100 001
Q ss_pred cccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHH
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 641 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~ 641 (1170)
....+++.|+|||.+.+ ..++.++|||||||++|||++ ||......+...... .+..++.....++++.+||.
T Consensus 190 ~~~~~~~~y~aPE~~~~-~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~ 266 (288)
T cd05050 190 ENDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYVR--DGNVLSCPDNCPLELYNLMR 266 (288)
T ss_pred CCCccChhhcCHHHHhc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--cCCCCCCCCCCCHHHHHHHH
Confidence 12245678999999887 568999999999999999985 675554444333322 23333333455678999999
Q ss_pred HccCCCCCCCCCHHHHHh
Q 001059 642 RLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~ 659 (1170)
+||+.||.+|||+.++++
T Consensus 267 ~~l~~~p~~Rpt~~el~~ 284 (288)
T cd05050 267 LCWSKLPSDRPSFASINR 284 (288)
T ss_pred HHcccCcccCCCHHHHHH
Confidence 999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M |
| >KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=349.66 Aligned_cols=248 Identities=22% Similarity=0.354 Sum_probs=203.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-Cc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-GR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-g~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
...++.+.||+|+||.||.|....- |. .||||.++ +..+.....+|++|..+|+.++|||||+++|.+++.
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~-~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~--- 767 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLK-RLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDS--- 767 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEecc-ccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCC---
Confidence 4567889999999999999998643 32 38899886 345556778999999999999999999999998653
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------CCCCHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQ 501 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~e~~~~~i~~q 501 (1170)
...+|++|||. |+|..+|++. ..++......++.|
T Consensus 768 -------------------------------------~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~d 810 (1025)
T KOG1095|consen 768 -------------------------------------GPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALD 810 (1025)
T ss_pred -------------------------------------CCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHH
Confidence 34589999995 6999999865 24888999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||.|+.|||++++|||||..+|+|++....|||+|||+|+.+...++.+.. ....-...|||||.++
T Consensus 811 vA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~~yyr~~-------------~~a~lPvkWm~PEsl~ 877 (1025)
T KOG1095|consen 811 VAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDKDYYRKH-------------GEAMLPVKWMPPESLK 877 (1025)
T ss_pred HhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhchheecc-------------CccccceecCCHHHHh
Confidence 999999999999999999999999999999999999999965444332211 1112345899999999
Q ss_pred CCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
. ..++.|+|||||||+|||++| ||....+.+.....+. .+++ +.+..++..+.++|..||+.+|++||++..|
T Consensus 878 d-~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~-ggRL-~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i 954 (1025)
T KOG1095|consen 878 D-GIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLE-GGRL-DPPSYCPEKLYQLMLQCWKHDPEDRPSFRTI 954 (1025)
T ss_pred h-cccccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHh-CCcc-CCCCCCChHHHHHHHHHccCChhhCccHHHH
Confidence 7 679999999999999999996 8877777666554444 3433 3445677789999999999999999999999
Q ss_pred Hh
Q 001059 658 LQ 659 (1170)
Q Consensus 658 L~ 659 (1170)
+.
T Consensus 955 ~~ 956 (1025)
T KOG1095|consen 955 VE 956 (1025)
T ss_pred Hh
Confidence 97
|
|
| >cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=349.56 Aligned_cols=149 Identities=30% Similarity=0.563 Sum_probs=133.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++|.++++||+|+||+||+|.+..+++.||||+++.... .......+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------- 75 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQS------- 75 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEE-------
Confidence 5789999999999999999999999999999999975432 23344678899999999999999999977632
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..++|+||||+. ++|.+++...+.+++..++.++.||+.||+|||+
T Consensus 76 ---------------------------------~~~~~lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~ 122 (669)
T cd05610 76 ---------------------------------ANNVYLVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHR 122 (669)
T ss_pred ---------------------------------CCEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 357899999996 5999999888889999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+||+||||||+||||+.++.+||+|||+++.
T Consensus 123 ~gIiHrDLKP~NILl~~~g~vkL~DFGls~~ 153 (669)
T cd05610 123 HGIIHRDLKPDNMLISNEGHIKLTDFGLSKV 153 (669)
T ss_pred CCEEeCCccHHHEEEcCCCCEEEEeCCCCcc
Confidence 9999999999999999999999999999874
|
Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481 |
| >KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=327.56 Aligned_cols=248 Identities=31% Similarity=0.481 Sum_probs=189.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.....||+|+||.||+|... +|..||||.+....... ..+|.+|+.+|.+++|||+|+++|||.+.+
T Consensus 74 T~~Fs~~~~ig~Ggfg~VYkG~l~-~~~~vAVK~~~~~~~~~--~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~~------ 144 (361)
T KOG1187|consen 74 TNNFSESNLIGEGGFGTVYKGVLS-DGTVVAVKRLSSNSGQG--EREFLNEVEILSRLRHPNLVKLLGYCLEGG------ 144 (361)
T ss_pred HhCCchhcceecCCCeEEEEEEEC-CCCEEEEEEecCCCCcc--hhHHHHHHHHHhcCCCcCcccEEEEEecCC------
Confidence 367888889999999999999987 55999999876543322 445999999999999999999999996531
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...++|+||++ |+|.++|+... .++|....+|+.++|+||+|||
T Consensus 145 ---------------------------------~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH 191 (361)
T KOG1187|consen 145 ---------------------------------EHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLH 191 (361)
T ss_pred ---------------------------------ceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHc
Confidence 15789999997 79999998655 8999999999999999999999
Q ss_pred hCC---ccccCCCCCceeecCCCCEEEeecCcchhccc-cccccCCCCCCCCCCccccCccc-ccCccCCCcccccCCCC
Q 001059 511 GQG---IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL-EQLDQDAAFPTDTGGVSVDGTGQ-VGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 511 s~g---IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~GT~~Y~APE~l~~~~~ 585 (1170)
... ||||||||+|||+|++.++||+|||+|+.... .. ..... .||.+|+|||++.. +.
T Consensus 192 ~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~----------------~~~~~~~gt~gY~~PEy~~~-g~ 254 (361)
T KOG1187|consen 192 EGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDT----------------SVSTTVMGTFGYLAPEYAST-GK 254 (361)
T ss_pred cCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCcccc----------------ceeeecCCCCccCChhhhcc-CC
Confidence 854 99999999999999999999999999964321 10 01112 79999999999987 67
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchh---HH--HHHHHHhhhcCCC----CCcc--ccC-----CHHHHHHHHHccCC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAM---ER--QIVLSDLKQKGEL----PPSW--VAK-----FSEQESLLRRLMSP 646 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~---~~--~~~~~~l~~~~~~----p~~~--~~~-----~~e~~~LI~~~L~~ 646 (1170)
.+.|+|||||||+|.||++ |..... +. ..........+.+ -+.. ... ...+..+..+|++.
T Consensus 255 lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~ 334 (361)
T KOG1187|consen 255 LTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRP 334 (361)
T ss_pred cCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCc
Confidence 8999999999999999997 232111 10 1111111111111 1111 111 12356788899999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
+|..||++.++++.
T Consensus 335 ~~~~RP~m~~Vv~~ 348 (361)
T KOG1187|consen 335 DPKERPTMSQVVKE 348 (361)
T ss_pred CCCcCcCHHHHHHH
Confidence 99999999998653
|
|
| >cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=313.02 Aligned_cols=246 Identities=26% Similarity=0.357 Sum_probs=199.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+|++.++||.|+||.||+|.++. +..+|+|++..... .....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~-~~~~~~k~~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 73 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKN-RVRVAIKILKSDDL--LKQQDFQKEVQALKRLRHKHLISLFAVCSV-------- 73 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecC-CCcEEEEeccccch--hhHHHHHHHHHHHhcCCCcchhheeeeEec--------
Confidence 3679999999999999999999986 89999999875432 235678899999999999999999987632
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH 121 (261)
T cd05148 74 --------------------------------GEPVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE 121 (261)
T ss_pred --------------------------------CCCeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 4999998753 35899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++....... .......++..|+|||++.+ ..++.++
T Consensus 122 ~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~---------------~~~~~~~~~~~~~~PE~~~~-~~~~~~~ 185 (261)
T cd05148 122 EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV---------------YLSSDKKIPYKWTAPEAASH-GTFSTKS 185 (261)
T ss_pred HCCeeccccCcceEEEcCCceEEEccccchhhcCCcc---------------ccccCCCCceEecCHHHHcc-CCCCchh
Confidence 9999999999999999999999999999998653211 01123346778999999887 5688999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|+|++ ||......+...... ....++.....++.+.++|.+||+.||.+|||+.++++.
T Consensus 186 DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~ 257 (261)
T cd05148 186 DVWSFGILLYEMFTYGQVPYPGMNNHEVYDQIT--AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREE 257 (261)
T ss_pred hHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHH--hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 99999999999986 676555444433333 222233345667899999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom |
| >cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=310.79 Aligned_cols=249 Identities=21% Similarity=0.330 Sum_probs=197.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+|++.+.||+|+||.||+|.++.++. .+|+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 76 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY-TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK------ 76 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec------
Confidence 578999999999999999999875544 79999886433 23345678999999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++|||++ ++|.+++... ..+++.+++.++.|++.||+||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l 122 (267)
T cd05066 77 ----------------------------------SKPVMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYL 122 (267)
T ss_pred ----------------------------------CCccEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 346799999997 5899998764 4689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+|||++.++.++|+|||++........ .........++..|+|||.+.+ ..++.+
T Consensus 123 H~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pe~~~~-~~~~~~ 189 (267)
T cd05066 123 SDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE------------AAYTTRGGKIPIRWTAPEAIAY-RKFTSA 189 (267)
T ss_pred HHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccc------------eeeecCCCccceeecCHhHhcc-CccCch
Confidence 999999999999999999999999999999986532110 0011122344678999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+|+|||||++||+++ ||......+...... ....++.....++.+.+++.+||+.+|.+||++.++++
T Consensus 190 ~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 261 (267)
T cd05066 190 SDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIE--EGYRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVS 261 (267)
T ss_pred hhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHh--CCCcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence 999999999999874 665544443333322 22223333456778999999999999999999999986
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul |
| >cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-33 Score=317.69 Aligned_cols=251 Identities=22% Similarity=0.290 Sum_probs=196.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|.+. .++..||+|+++.... ....+.+.+|+.+++++ +||||+++++++..
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 110 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH-SSEREALMSELKIMSHLGNHENIVNLLGACTI-- 110 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC-hHHHHHHHHHHHHHHhccCCCCcceEEEEEec--
Confidence 468999999999999999999863 3456899998874432 33456789999999999 89999999988732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVE 504 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~ 504 (1170)
...+|++|||++ ++|.+++.... .+++.++..++.||+.
T Consensus 111 --------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~ 152 (302)
T cd05055 111 --------------------------------------GGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAK 152 (302)
T ss_pred --------------------------------------CCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHH
Confidence 345799999997 69999887543 3899999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||+|||+++|+|+||||+|||++.++.+||+|||+++.+..... ........+++.|+|||++.+ .
T Consensus 153 ~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~ 218 (302)
T cd05055 153 GMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSN-------------YVVKGNARLPVKWMAPESIFN-C 218 (302)
T ss_pred HHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCc-------------eeecCCCCcccccCCHhhhcc-C
Confidence 99999999999999999999999999999999999985432110 001122346788999999887 5
Q ss_pred CCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++|||||||++|||++ ||.............. .+..+......++++.+++.+||+.+|.+|||+.++++.
T Consensus 219 ~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~ 297 (302)
T cd05055 219 VYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIK-EGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQL 297 (302)
T ss_pred CCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHH-cCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 68999999999999999985 6654443333333322 222222333456789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept |
| >cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-33 Score=308.58 Aligned_cols=241 Identities=24% Similarity=0.378 Sum_probs=192.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||++... |..||+|.++... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~--~~~~~~k~~~~~~----~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~------- 71 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 71 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEEc--CCcEEEEEeCCCc----hHHHHHHHHHHHHhCCCCCeeeEEEEEEcC-------
Confidence 468999999999999999999875 8899999885321 245788999999999999999999876432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 119 (256)
T cd05082 72 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 119 (256)
T ss_pred --------------------------------CCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999887644 4889999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.+||+|||++...... .....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~ 180 (256)
T cd05082 120 ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCEeccccchheEEEcCCCcEEecCCccceecccc------------------CCCCccceeecCHHHHcc-CCCCchh
Confidence 999999999999999999999999999998753211 112244568999999887 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+..... . ....+......++.+.++|.+||+.+|++|||+.++++.
T Consensus 181 Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~ 252 (256)
T cd05082 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQ 252 (256)
T ss_pred hhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 99999999999985 66544333332222 1 122222334567799999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re |
| >cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-33 Score=314.05 Aligned_cols=250 Identities=31% Similarity=0.488 Sum_probs=196.7
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|++.+.||.|+||+||+|....+++.||||.+...... .......+|+..+++++ ||||+++++++..
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~---------- 69 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYS-WEECMNLREVKSLRKLNEHPNIVKLKEVFRE---------- 69 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccc-hhHHHHHHHHHHHHhccCCCCchhHHHHhhc----------
Confidence 67889999999999999999988999999998654332 22334567999999999 9999999877632
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....|+||||++++|.+.+.... .+++..+..++.|++.||.|||++|
T Consensus 70 ------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~ 119 (283)
T cd07830 70 ------------------------------NDELYFVFEYMEGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHG 119 (283)
T ss_pred ------------------------------CCcEEEEEecCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 35679999999989999887754 7899999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
++|+||||+||+++.++.++|+|||++....... ..+...++..|+|||++.+...++.++|+|
T Consensus 120 i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~ 183 (283)
T cd07830 120 FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP----------------PYTDYVSTRWYRAPEILLRSTSYSSPVDIW 183 (283)
T ss_pred cccCCCChhhEEEcCCCCEEEeecccceeccCCC----------------CcCCCCCcccccCceeeecCcCcCCccchh
Confidence 9999999999999999999999999997542111 112346889999999886655689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-------------------CCC--------CccccCCHHHHHHHHHc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG-------------------ELP--------PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-------------------~~p--------~~~~~~~~e~~~LI~~~ 643 (1170)
|||+++|||++ ||................+ ..+ ......++.+.++|++|
T Consensus 184 s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~c 263 (283)
T cd07830 184 ALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDM 263 (283)
T ss_pred hHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhccccccccccccccHHHHcccCCHHHHHHHHHh
Confidence 99999999997 5543322222111110000 000 01112346789999999
Q ss_pred cCCCCCCCCCHHHHHhccCC
Q 001059 644 MSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~ 663 (1170)
|+.||.+|||+.+++.|+||
T Consensus 264 l~~~p~~Rpt~~ei~~~~~~ 283 (283)
T cd07830 264 LRWDPKKRPTASQALQHPYF 283 (283)
T ss_pred cccCcccCCCHHHHhhCCCC
Confidence 99999999999999999996
|
Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili |
| >KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.6e-34 Score=305.75 Aligned_cols=262 Identities=24% Similarity=0.403 Sum_probs=212.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
-+++|.++++||+|+|.+|.+++++.|.+.||+|++++.-. ..+..+-+..|-.+..+. +||.+|.++.||
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf------- 320 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF------- 320 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh-------
Confidence 36899999999999999999999999999999999976432 222334455566666655 799999999887
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
+....+|+|.||++ |+|.-++++...++++.++.|..+|+.||.||
T Consensus 321 ---------------------------------qtesrlffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~fl 367 (593)
T KOG0695|consen 321 ---------------------------------QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFL 367 (593)
T ss_pred ---------------------------------cccceEEEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHH
Confidence 23567899999997 59999999989999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|||+||||.+|+|+|..|++||+|+|+++.--.+ + -..+++||||.|.|||++.| ..|+..
T Consensus 368 h~rgiiyrdlkldnvlldaeghikltdygmcke~l~~------------g---d~tstfcgtpnyiapeilrg-eeygfs 431 (593)
T KOG0695|consen 368 HERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGP------------G---DTTSTFCGTPNYIAPEILRG-EEYGFS 431 (593)
T ss_pred hhcCeeeeeccccceEEccCCceeecccchhhcCCCC------------C---cccccccCCCcccchhhhcc-cccCce
Confidence 9999999999999999999999999999999842111 1 12467899999999999999 689999
Q ss_pred chhHHHHHHHHHhhc---CCCc------hhH-HHHHHHHhh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCC------
Q 001059 590 ADMYSLGIVFFELWH---PFST------AME-RQIVLSDLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRP------ 652 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~------~~~-~~~~~~~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP------ 652 (1170)
+|+|+|||+++||+. ||.- ..+ ...+.+.+. ....+|.... -.+..+++..|++||.+|.
T Consensus 432 vdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiriprsls---vkas~vlkgflnkdp~erlgc~~~~ 508 (593)
T KOG0695|consen 432 VDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRIPRSLS---VKASHVLKGFLNKDPKERLGCRPQT 508 (593)
T ss_pred ehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccccceee---hhhHHHHHHhhcCCcHHhcCCCccc
Confidence 999999999999995 8851 122 223333333 3344554433 3677899999999999986
Q ss_pred CHHHHHhccCCCCchHHHHHH
Q 001059 653 SATELLQDALPPQMEYELLDN 673 (1170)
Q Consensus 653 ta~eiL~~~~~~~~~~~~~~~ 673 (1170)
.+.++-.|+||....|+.+..
T Consensus 509 g~~dik~h~ffr~idwd~leq 529 (593)
T KOG0695|consen 509 GFSDIKSHAFFRSIDWDLLEQ 529 (593)
T ss_pred chhhhhcchhhhhCCHHHHhh
Confidence 578999999999999887643
|
|
| >cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-33 Score=309.98 Aligned_cols=253 Identities=21% Similarity=0.332 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||.||+|.++.+|+ .||||+++.. ........+.+|+.+++.++||||+++++++..
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~----- 76 (269)
T cd05065 3 VSCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTK----- 76 (269)
T ss_pred hHHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCcCcceEEEEECC-----
Confidence 3578999999999999999999987765 5999998643 234455689999999999999999999987632
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...++++|||++ ++|.+++... +.+++..++.++.|++.||+|
T Consensus 77 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~ 121 (269)
T cd05065 77 -----------------------------------SRPVMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 121 (269)
T ss_pred -----------------------------------CCceEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHH
Confidence 345799999997 5898888753 468999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++||||||+||+++.++.+||+|||++.......... . .....+...+..|+|||.+.+ ..++.
T Consensus 122 lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~--~--------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (269)
T cd05065 122 LSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP--T--------YTSSLGGKIPIRWTAPEAIAY-RKFTS 190 (269)
T ss_pred HHHCCEeecccChheEEEcCCCcEEECCCccccccccCcccc--c--------cccccCCCcceeecCHhHhcc-Ccccc
Confidence 999999999999999999999999999999987653211000 0 000111223568999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||...........+ ...... +.....++.+.+++.+||..+|.+||++.++++.
T Consensus 191 ~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i-~~~~~~-~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~ 264 (269)
T cd05065 191 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAI-EQDYRL-PPPMDCPTALHQLMLDCWQKDRNARPKFGQIVST 264 (269)
T ss_pred hhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHH-HcCCcC-CCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999999874 77655444333332 222222 2234566789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr |
| >cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-33 Score=308.91 Aligned_cols=244 Identities=25% Similarity=0.358 Sum_probs=193.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. ++..||+|.++..... ...+.+|+.++++++||||+++++++.
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~--------- 71 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWN-GNTKVAVKTLKPGTMS---PESFLEEAQIMKKLRHDKLVQLYAVVS--------- 71 (260)
T ss_pred hHHhhhhheeccccCceEEEEEec-CCceeEEEEecCCCCC---HHHHHHHHHHHHhcCCCceEEEEeEEC---------
Confidence 468999999999999999999876 6677999998754332 356889999999999999999997651
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH 119 (260)
T cd05070 72 --------------------------------EEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE 119 (260)
T ss_pred --------------------------------CCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123689999997 5999988753 35899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.++|+|||++........ .......++..|+|||.+.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 184 (260)
T cd05070 120 RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 184 (260)
T ss_pred HCCcccCCCccceEEEeCCceEEeCCceeeeeccCccc--------------ccccCCCCCccccChHHHhc-CCCcchh
Confidence 99999999999999999999999999999976432110 01112345678999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||+++|+|++ ||......+..... . ....++.....+..+.+|+.+||+++|.+|||+.+++.
T Consensus 185 Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~ 255 (260)
T cd05070 185 DVWSFGILLTELVTKGRVPYPGMNNREVLEQV-E-RGYRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQS 255 (260)
T ss_pred hhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH-H-cCCCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999986 66554443333322 2 22222333456678999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r |
| >cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-33 Score=312.66 Aligned_cols=252 Identities=28% Similarity=0.443 Sum_probs=193.2
Q ss_pred CCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
++|++++.||+|+||.||+|.. ..++..||+|.+... .......+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---- 77 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHS--TAEHLRDFEREIEILKSLQHDNIVKYKGVCYSA---- 77 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccC----
Confidence 5789999999999999999984 457889999998643 233456788999999999999999999876321
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++|||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 78 ----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~ 123 (284)
T cd05081 78 ----------------------------------GRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEY 123 (284)
T ss_pred ----------------------------------CCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHH
Confidence 1345799999996 6999998754 468999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+||+++.++.+||+|||++......... ........++..|+|||++.+ ..++.
T Consensus 124 LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~ 190 (284)
T cd05081 124 LGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEY------------YKVREPGESPIFWYAPESLTE-SKFSV 190 (284)
T ss_pred HHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcc------------eeecCCCCCceEeeCHHHhcc-CCcCh
Confidence 99999999999999999999999999999999865321100 000112234557999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHH---------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMER---------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~---------------~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
++|||||||++|||++ |+...... ......+. ....++.....++++.+||.+||+.+|++
T Consensus 191 ~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~ 269 (284)
T cd05081 191 ASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIELLK-NNGRLPAPPGCPAEIYAIMKECWNNDPSQ 269 (284)
T ss_pred HHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHHHHh-cCCcCCCCCCCCHHHHHHHHHHccCChhh
Confidence 9999999999999986 22111000 00011111 22222333456678999999999999999
Q ss_pred CCCHHHHHhc
Q 001059 651 RPSATELLQD 660 (1170)
Q Consensus 651 RPta~eiL~~ 660 (1170)
|||+.++++.
T Consensus 270 Rpt~~ei~~~ 279 (284)
T cd05081 270 RPSFSELALQ 279 (284)
T ss_pred CCCHHHHHHH
Confidence 9999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th |
| >cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.8e-33 Score=309.20 Aligned_cols=243 Identities=23% Similarity=0.333 Sum_probs=193.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.++||+|+||.||+|.+..+ ..||+|+++..... ...+.+|+.+++.++||||+++++.+.
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~-~~valK~~~~~~~~---~~~~~~E~~~l~~l~~~~i~~~~~~~~---------- 71 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGT-TRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVS---------- 71 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCC-ceEEEEecccCccC---HHHHHHHHHHHHhCCCCCcceEEEEEC----------
Confidence 5799999999999999999998755 56999998743332 356889999999999999999987651
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|++|||++ ++|.+++... ..+++..++.++.|++.||+|||+
T Consensus 72 -------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~ 120 (262)
T cd05071 72 -------------------------------EEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVER 120 (262)
T ss_pred -------------------------------CCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 134589999997 5999998753 358899999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
++++||||||+||+++.++.+||+|||.++....... .......++..|+|||++.+ ..++.++|
T Consensus 121 ~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~D 185 (262)
T cd05071 121 MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (262)
T ss_pred CCccccccCcccEEEcCCCcEEeccCCceeecccccc--------------ccccCCcccceecCHhHhcc-CCCCchhh
Confidence 9999999999999999999999999999976532110 00112346778999999876 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||++|||++ ||......+....+.. . ..++.....++.+.++|.+||+.||.+||++.++++
T Consensus 186 vwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~ 255 (262)
T cd05071 186 VWSFGILLTELTTKGRVPYPGMVNREVLDQVER-G-YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 255 (262)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhc-C-CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence 9999999999997 6765544443332221 2 122223456678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo |
| >cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=314.45 Aligned_cols=248 Identities=23% Similarity=0.354 Sum_probs=196.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+|.+.+.||+|+||.||+|.+. .++..+++|.+.. ........+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD--PTLAARKDFQREAELLTNLQHEHIVKFYGVCGD---- 78 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCC--ccHHHHHHHHHHHHHHhcCCCCCcceEEEEEcc----
Confidence 57899999999999999999864 2456799998753 233344678899999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCCH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDK 492 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e 492 (1170)
...+++||||++ ++|.+++.... .+++
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 122 (291)
T cd05094 79 ------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGL 122 (291)
T ss_pred ------------------------------------CCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCH
Confidence 345799999996 59999886532 3789
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCc
Q 001059 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572 (1170)
Q Consensus 493 ~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 572 (1170)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+++
T Consensus 123 ~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~-------------~~~~~~~~~~~ 189 (291)
T cd05094 123 SQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDY-------------YRVGGHTMLPI 189 (291)
T ss_pred HHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCce-------------eecCCCCCcce
Confidence 99999999999999999999999999999999999999999999999975432110 01122346788
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 648 (1170)
.|+|||++.+ ..++.++|||||||++|||++ ||......+...... .+..+......+..+.+++.+||+.||
T Consensus 190 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P 266 (291)
T cd05094 190 RWMPPESIMY-RKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECIT--QGRVLERPRVCPKEVYDIMLGCWQREP 266 (291)
T ss_pred eecChHHhcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--CCCCCCCCccCCHHHHHHHHHHcccCh
Confidence 9999999887 568999999999999999986 665544444332221 333333334456789999999999999
Q ss_pred CCCCCHHHHHhc
Q 001059 649 SDRPSATELLQD 660 (1170)
Q Consensus 649 ~~RPta~eiL~~ 660 (1170)
++|||+.++++.
T Consensus 267 ~~Rpt~~~v~~~ 278 (291)
T cd05094 267 QQRLNIKEIYKI 278 (291)
T ss_pred hhCcCHHHHHHH
Confidence 999999999864
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n |
| >cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=308.06 Aligned_cols=250 Identities=21% Similarity=0.324 Sum_probs=196.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|+..+.||+|+||.||+|.++.++. .+|+|.++... .....+.+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (268)
T cd05063 5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGY-TEKQRQDFLSEASIMGQFSHHNIIRLEGVVTK------ 77 (268)
T ss_pred HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccC-CHHHHHHHHHHHHHHhcCCCCCeeEEEEEEcc------
Confidence 578899999999999999999986665 79999886432 23345678999999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++|||++ ++|.+++... ..+++..+..++.|++.||+||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~l 123 (268)
T cd05063 78 ----------------------------------FKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYL 123 (268)
T ss_pred ----------------------------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999997 5898888653 5689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+||+++.++.+||+|||++........ ..........++.|+|||++.+ ..++.+
T Consensus 124 H~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~PE~~~~-~~~~~~ 190 (268)
T cd05063 124 SDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPE------------GTYTTSGGKIPIRWTAPEAIAY-RKFTSA 190 (268)
T ss_pred HHCCeeccccchhhEEEcCCCcEEECCCccceecccccc------------cceeccCCCcCceecCHHHhhc-CCcChH
Confidence 999999999999999999999999999999876532110 0001112234568999999887 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||...........+ . .....+.....++++.+++.+||+.+|.+||++.++++.
T Consensus 191 ~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i-~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~ 263 (268)
T cd05063 191 SDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAI-N-DGFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNL 263 (268)
T ss_pred hHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHH-h-cCCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence 999999999999875 77654444333332 2 222333334567789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored |
| >cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-33 Score=306.19 Aligned_cols=241 Identities=23% Similarity=0.383 Sum_probs=195.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||.|+||.||+|... |+.||+|.++.... ..+++.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~--~~~v~iK~~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 71 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR--GQKVAVKCLKDDST---AAQAFLAEASVMTTLRHPNLVQLLGVVLQ-------- 71 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec--CcEEEEEEeccchh---HHHHHHHHHHHHHhcCCcceeeeEEEEcC--------
Confidence 468999999999999999999875 89999999874432 45678999999999999999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|++|||++ ++|.+++.... .+++..++.++.|++.||.|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh 119 (256)
T cd05039 72 --------------------------------GNPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE 119 (256)
T ss_pred --------------------------------CCCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999987665 6999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.+||+|||+++...... ....++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~------------------~~~~~~~~~~ape~~~~-~~~~~~~ 180 (256)
T cd05039 120 EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ------------------DSGKLPVKWTAPEALRE-KKFSTKS 180 (256)
T ss_pred hCCccchhcccceEEEeCCCCEEEccccccccccccc------------------ccCCCcccccCchhhcC-CcCCcHH
Confidence 9999999999999999999999999999998652111 12234567999999876 5688999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|||++ ||......... ..+.. ...+......++++.++|.+||..+|.+|||+.++++.
T Consensus 181 Di~slG~il~~l~~~g~~p~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 252 (256)
T cd05039 181 DVWSFGILLWEIYSFGRVPYPRIPLKDVV-PHVEK-GYRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQ 252 (256)
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHhc-CCCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 99999999999985 66554433332 22221 11222233456789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk |
| >cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-33 Score=316.74 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=195.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
++|.+.+.||+|+||.||+|++.. ++..||+|.++... .......+.+|+.+++.+ +||||+++++++..
T Consensus 18 ~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~- 95 (307)
T cd05098 18 DRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA-TEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ- 95 (307)
T ss_pred HHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC-ChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec-
Confidence 689999999999999999998753 23579999987432 233456788999999999 79999999988732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CC
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DH 489 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~ 489 (1170)
...+|++|||++ ++|.+++... ..
T Consensus 96 ---------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~ 136 (307)
T cd05098 96 ---------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQ 136 (307)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 346799999997 5999998753 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
++..+++.++.||+.||+|||++|++||||||+|||++.++.+||+|||+++........ .......
T Consensus 137 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~-------------~~~~~~~ 203 (307)
T cd05098 137 LSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYY-------------KKTTNGR 203 (307)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchh-------------hccccCC
Confidence 788899999999999999999999999999999999999999999999998754321100 0112224
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
+++.|+|||++.+ ..++.++|||||||++|||++ ||..... +.....+. ....++.....++++.+||.+||.
T Consensus 204 ~~~~y~aPE~~~~-~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~ 280 (307)
T cd05098 204 LPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-EELFKLLK-EGHRMDKPSNCTNELYMMMRDCWH 280 (307)
T ss_pred CccceeChHHhcc-CCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-HHHHHHHH-cCCCCCCCCcCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 5644333 33333332 222233334567799999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 001059 646 PSPSDRPSATELLQD 660 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~ 660 (1170)
.+|.+|||+.+++++
T Consensus 281 ~~p~~Rps~~evl~~ 295 (307)
T cd05098 281 AVPSQRPTFKQLVED 295 (307)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999875
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-33 Score=312.22 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=194.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+|...++||+|+||.||+|... .++..+|+|.+... .......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 78 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEA--SESARQDFQREAELLTVLQHQHIVRFYGVCTE---- 78 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcC--CHHHHHHHHHHHHHHhcCCCCCCceEEEEEec----
Confidence 57888999999999999999753 34678999987633 33445679999999999999999999987732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---------------CCCHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------HFDKE 493 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------~l~e~ 493 (1170)
....|++|||++ ++|.+++.... .+++.
T Consensus 79 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~ 122 (280)
T cd05092 79 ------------------------------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLG 122 (280)
T ss_pred ------------------------------------CCceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHH
Confidence 345799999997 58998886542 47889
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
.++.++.||+.||+|||++|++||||||+|||+++++.+||+|||+++....... ........+++.
T Consensus 123 ~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~ 189 (280)
T cd05092 123 QMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY-------------YRVGGRTMLPIR 189 (280)
T ss_pred HHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCce-------------eecCCCcccccc
Confidence 9999999999999999999999999999999999999999999999975421110 001122346788
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
|+|||.+.+ ..++.++|||||||++|||++ ||............. .+..+......++.+.++|.+||+.||.
T Consensus 190 y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~cl~~~P~ 266 (280)
T cd05092 190 WMPPESILY-RKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT--QGRELERPRTCPPEVYAIMQGCWQREPQ 266 (280)
T ss_pred ccCHHHhcc-CCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH--cCccCCCCCCCCHHHHHHHHHHccCChh
Confidence 999999887 568999999999999999986 665444433333322 2222233345678999999999999999
Q ss_pred CCCCHHHHHh
Q 001059 650 DRPSATELLQ 659 (1170)
Q Consensus 650 ~RPta~eiL~ 659 (1170)
+||++.++++
T Consensus 267 ~Rp~~~~l~~ 276 (280)
T cd05092 267 QRMVIKDIHS 276 (280)
T ss_pred hCCCHHHHHH
Confidence 9999999985
|
Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory |
| >cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-33 Score=319.09 Aligned_cols=253 Identities=22% Similarity=0.303 Sum_probs=192.6
Q ss_pred CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccc
Q 001059 367 GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASST 446 (1170)
Q Consensus 367 ~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~ 446 (1170)
++|.||++++..+|+.||||+++...........+.+|+.+++.++||||++++++|.+
T Consensus 12 ~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~--------------------- 70 (314)
T cd08216 12 DLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIV--------------------- 70 (314)
T ss_pred CCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeec---------------------
Confidence 55667777777789999999998664455566789999999999999999999988743
Q ss_pred cccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCc
Q 001059 447 FSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523 (1170)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~N 523 (1170)
....|++||||+ ++|.+++... ..+++..+..++.||+.||+|||+++|+||||||+|
T Consensus 71 -------------------~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~N 131 (314)
T cd08216 71 -------------------DSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASH 131 (314)
T ss_pred -------------------CCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcce
Confidence 356799999997 5888888753 458999999999999999999999999999999999
Q ss_pred eeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHHHHHHHHHh
Q 001059 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFEL 602 (1170)
Q Consensus 524 ILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlGviL~EL 602 (1170)
||++.++.+||+|||.+..+....... ...........++..|+|||++.+. ..++.++|||||||++|||
T Consensus 132 ili~~~~~~kl~d~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el 203 (314)
T cd08216 132 ILLSGDGKVVLSGLRYSVSMIKHGKRQ--------RVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACEL 203 (314)
T ss_pred EEEecCCceEEecCccceeeccccccc--------cccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHH
Confidence 999999999999999987653221100 0001112344678899999998763 3488999999999999999
Q ss_pred hc---CCCchhHHHHHHHHhhhcCC-------CCC------------------------ccccCCHHHHHHHHHccCCCC
Q 001059 603 WH---PFSTAMERQIVLSDLKQKGE-------LPP------------------------SWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 603 lt---Pf~~~~~~~~~~~~l~~~~~-------~p~------------------------~~~~~~~e~~~LI~~~L~~dP 648 (1170)
++ ||.................. .+. .....++++.+||.+||+.||
T Consensus 204 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P 283 (314)
T cd08216 204 ANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDP 283 (314)
T ss_pred HhCCCCCCCCCHHHHHHHHHhccCccccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCC
Confidence 96 77655443333222211100 000 001122467899999999999
Q ss_pred CCCCCHHHHHhccCCCCch
Q 001059 649 SDRPSATELLQDALPPQME 667 (1170)
Q Consensus 649 ~~RPta~eiL~~~~~~~~~ 667 (1170)
++|||+.++|+|||+.++.
T Consensus 284 ~~Rpt~~~ll~~p~~~~~~ 302 (314)
T cd08216 284 ESRPSASQLLNHSFFKQCK 302 (314)
T ss_pred CcCcCHHHHhcCchHhhhc
Confidence 9999999999999988663
|
Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc |
| >cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-32 Score=305.87 Aligned_cols=244 Identities=25% Similarity=0.377 Sum_probs=193.3
Q ss_pred eeeccCCcEEEEEEEEcc-CCc--EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKL-DGR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~-tg~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.||+|+||.||+|.+.. +++ .||||.+...... ...+.+.+|+.++++++||||+++++.+.
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------------- 66 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS-DIMDDFLKEAAIMHSLDHENLIRLYGVVL------------- 66 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH-HHHHHHHHHHHHHhhcCCCCccceeEEEc-------------
Confidence 368999999999999865 333 6999998755443 55678999999999999999999998762
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
. ..++++|||++ ++|.+++.... .+++..++.++.|++.||+|||++|+
T Consensus 67 ---------------------------~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i 118 (257)
T cd05040 67 ---------------------------T-HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRF 118 (257)
T ss_pred ---------------------------C-CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCc
Confidence 1 46799999996 69999987654 68999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.+||+|||++..+..... .........++..|+|||++.+ ..++.++||||
T Consensus 119 ~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~~pE~~~~-~~~~~~~Di~s 185 (257)
T cd05040 119 IHRDLAARNILLASDDKVKIGDFGLMRALPQNED------------HYVMEEHLKVPFAWCAPESLRT-RTFSHASDVWM 185 (257)
T ss_pred cccccCcccEEEecCCEEEecccccccccccccc------------ceecccCCCCCceecCHHHhcc-cCcCchhhhHH
Confidence 9999999999999999999999999987632210 0011123457889999999887 56899999999
Q ss_pred HHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 595 LGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 595 lGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||++|||++ ||......+....... .....+.....++.+.+++.+||+.+|++||++.++++.
T Consensus 186 lG~~l~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~ 254 (257)
T cd05040 186 FGVTLWEMFTYGEEPWAGLSGSQILKKIDK-EGERLERPEACPQDIYNVMLQCWAHNPADRPTFAALREF 254 (257)
T ss_pred HHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCcCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHH
Confidence 9999999986 7655444443333322 222222233456789999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and |
| >cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=306.70 Aligned_cols=244 Identities=26% Similarity=0.374 Sum_probs=194.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|+++++||.|+||.||+|..+ +++.||+|.+...... ...+.+|+.+++.++||||+++++.+.
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~-~~~~~a~K~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 71 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYN-GHTKVAIKSLKQGSMS---PEAFLAEANLMKQLQHPRLVRLYAVVT--------- 71 (260)
T ss_pred hHHceeeeeeccCccceEEeeecC-CCceEEEEEecCCCCc---HHHHHHHHHHHHhcCCcCeeeEEEEEc---------
Confidence 468999999999999999999876 6788999998744332 457889999999999999999987641
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||+. ++|.+++... ..+++.+++.++.|++.||+|||
T Consensus 72 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH 119 (260)
T cd05067 72 --------------------------------QEPIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE 119 (260)
T ss_pred --------------------------------cCCcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 234689999996 5899988653 35899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.|++||||||+||+++.++.++|+|||++........ .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~pe~~~~-~~~~~~~ 184 (260)
T cd05067 120 RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY--------------TAREGAKFPIKWTAPEAINY-GTFTIKS 184 (260)
T ss_pred cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc--------------ccccCCcccccccCHHHhcc-CCcCccc
Confidence 99999999999999999999999999999976532110 01123356788999999887 5688999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||+++|||++ ||......+.... +. ....++.....+.++.++|.+||+.+|++||++++++.
T Consensus 185 Di~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05067 185 DVWSFGILLTEIVTYGRIPYPGMTNPEVIQN-LE-RGYRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRS 255 (260)
T ss_pred chHHHHHHHHHHHhCCCCCCCCCChHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence 99999999999996 6755444333222 22 22222333445678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr |
| >cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-33 Score=329.35 Aligned_cols=251 Identities=21% Similarity=0.310 Sum_probs=195.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~ 427 (1170)
.++|.+.+.||+|+||.||+|++. .++..||+|+++..... ...+.+.+|+.+|..+. |||||+++++|..
T Consensus 36 ~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~-~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~-- 112 (401)
T cd05107 36 RDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARS-SEKQALMSELKIMSHLGPHLNIVNLLGACTK-- 112 (401)
T ss_pred HHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCCh-hHHHHHHHHHHHHHhcCCCCCeEEEEEEEcc--
Confidence 357888899999999999999964 34568999999754322 33457889999999997 9999999998833
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 488 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 488 (1170)
...+|+|||||+ |+|.++++...
T Consensus 113 --------------------------------------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 154 (401)
T cd05107 113 --------------------------------------GGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLI 154 (401)
T ss_pred --------------------------------------CCCcEEEEeccCCCcHHHHHHhccccchhhhccccccccccc
Confidence 245799999996 69998886431
Q ss_pred --------------------------------------------------------------------------------
Q 001059 489 -------------------------------------------------------------------------------- 488 (1170)
Q Consensus 489 -------------------------------------------------------------------------------- 488 (1170)
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (401)
T cd05107 155 SGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESP 234 (401)
T ss_pred ccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCC
Confidence
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||+++++||||||+|||++.++.+||+|||+++.+..... .......
T Consensus 235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL~DfGla~~~~~~~~-------------~~~~~~~ 301 (401)
T cd05107 235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICDFGLARDIMRDSN-------------YISKGST 301 (401)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEEEecCcceecccccc-------------cccCCCc
Confidence 256677889999999999999999999999999999999999999999999986422110 0011234
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.+++.|+|||.+.+ ..++.++|||||||++|||++ ||......+.....+. .+..++.....+.++.+|+.+||
T Consensus 302 ~~~~~y~aPE~~~~-~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~li~~cl 379 (401)
T cd05107 302 FLPLKWMAPESIFN-NLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIK-RGYRMAKPAHASDEIYEIMQKCW 379 (401)
T ss_pred CCCCceeChHHhcC-CCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHH-cCCCCCCCCCCCHHHHHHHHHHc
Confidence 67889999999987 568999999999999999986 6654433333333332 22223333456789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
..+|.+||++.+|++.
T Consensus 380 ~~~P~~RPs~~ell~~ 395 (401)
T cd05107 380 EEKFEIRPDFSQLVHL 395 (401)
T ss_pred CCChhHCcCHHHHHHH
Confidence 9999999999999874
|
Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D |
| >cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.4e-33 Score=315.79 Aligned_cols=250 Identities=23% Similarity=0.358 Sum_probs=195.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-------~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
..+|.+.+.||+|+||.||+|++. .++..||+|.+... ........+.+|+.+++.+ +||||+++++++..
T Consensus 14 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 14 RDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred HHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc-cchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 468899999999999999999863 23457999988633 2233456789999999999 89999999988732
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------C
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------D 488 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~ 488 (1170)
...+|++|||++ ++|.+++... .
T Consensus 93 ----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 132 (304)
T cd05101 93 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDE 132 (304)
T ss_pred ----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcc
Confidence 346799999997 5999988753 2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.++...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++....... .......
T Consensus 133 ~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~-------------~~~~~~~ 199 (304)
T cd05101 133 QMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDY-------------YKKTTNG 199 (304)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccc-------------cccccCC
Confidence 467788999999999999999999999999999999999999999999999986532110 0111233
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.+++.|+|||++.+ ..++.++|||||||++|+|++ ||......+. ...+.. ...+......+.++.+||.+||
T Consensus 200 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~li~~cl 276 (304)
T cd05101 200 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEEL-FKLLKE-GHRMDKPANCTNELYMMMRDCW 276 (304)
T ss_pred CCCceeeCchhhcc-CCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHH-HHHHHc-CCcCCCCCCCCHHHHHHHHHHc
Confidence 56788999999987 568999999999999999986 5544333332 222222 2222233456779999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
..+|.+|||+.++++.
T Consensus 277 ~~~p~~Rps~~e~l~~ 292 (304)
T cd05101 277 HAIPSHRPTFKQLVED 292 (304)
T ss_pred ccChhhCCCHHHHHHH
Confidence 9999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-33 Score=316.53 Aligned_cols=253 Identities=23% Similarity=0.407 Sum_probs=200.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|+...+||+|+||.||++.++.+|+.||||++.... ......+.+|+.+++.++||||+++++.+..
T Consensus 21 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~---------- 88 (292)
T cd06657 21 YLDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK--QQRRELLFNEVVIMRDYQHENVVEMYNSYLV---------- 88 (292)
T ss_pred HhhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc--hhHHHHHHHHHHHHHhcCCcchhheeeEEEe----------
Confidence 3344578999999999999999999999999886432 2345678999999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
..+.|++|||+++ +|.+++. ...+++..++.++.|++.||+|||++|+
T Consensus 89 ------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~~~~ql~~~l~~lH~~gi 137 (292)
T cd06657 89 ------------------------------GDELWVVMEFLEGGALTDIVT-HTRMNEEQIAAVCLAVLKALSVLHAQGV 137 (292)
T ss_pred ------------------------------CCEEEEEEecCCCCcHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 3578999999975 7777664 4568999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||+++.++.++|+|||++....... .......|++.|+|||.+.+ ..++.++|+||
T Consensus 138 vH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~---------------~~~~~~~~~~~y~~pE~~~~-~~~~~~~Dv~s 201 (292)
T cd06657 138 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIWS 201 (292)
T ss_pred ecCCCCHHHEEECCCCCEEEcccccceeccccc---------------ccccccccCccccCHHHhcC-CCCCchhhHHH
Confidence 999999999999999999999999987542110 01123468999999999876 56789999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+++|+|++ ||..........................++.+.++|.+||+.||.+||++.++++|+||....
T Consensus 202 lGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~ 277 (292)
T cd06657 202 LGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAG 277 (292)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCcccCCcccCCHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccC
Confidence 9999999996 776544333222211111111122344567899999999999999999999999999877654
|
Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo |
| >cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-33 Score=314.16 Aligned_cols=250 Identities=22% Similarity=0.307 Sum_probs=191.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----------------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCcee
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL----------------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~----------------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~ 418 (1170)
++|++.+.||+|+||.||+|.+.. ++..||+|++... ........+.+|+.+++.++||||++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLRED-ANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 578999999999999999987542 3457999998643 23334567899999999999999999
Q ss_pred EEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---------
Q 001059 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--------- 488 (1170)
Q Consensus 419 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--------- 488 (1170)
+++++.. ....|++|||++ ++|.+++....
T Consensus 84 ~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~ 123 (296)
T cd05095 84 LLAVCIT----------------------------------------SDPLCMITEYMENGDLNQFLSRHEPQEAAEKAD 123 (296)
T ss_pred EEEEEec----------------------------------------CCccEEEEEeCCCCcHHHHHHhcCccccccccc
Confidence 9988732 245799999996 59998886532
Q ss_pred --CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCc
Q 001059 489 --HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 566 (1170)
Q Consensus 489 --~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1170)
.+++..++.++.||+.||+|||++|++||||||+|||++.++.++|+|||+++.+...... ....
T Consensus 124 ~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~ 190 (296)
T cd05095 124 VVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYY-------------RIQG 190 (296)
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcce-------------eccC
Confidence 3677889999999999999999999999999999999999999999999999864221100 0011
Q ss_pred ccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-----CCCchhHHHHHHHHh---hh--cCCCCCccccCCHHH
Q 001059 567 GQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVLSDL---KQ--KGELPPSWVAKFSEQ 636 (1170)
Q Consensus 567 ~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt-----Pf~~~~~~~~~~~~l---~~--~~~~p~~~~~~~~e~ 636 (1170)
...+++.|+|||...+ ..++.++|||||||++|||++ ||......+...... .. .....+.....++.+
T Consensus 191 ~~~~~~~~~~pe~~~~-~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (296)
T cd05095 191 RAVLPIRWMSWESILL-GKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGEFFRDQGRQVYLPKPALCPDSL 269 (296)
T ss_pred cCcCccccCCHHHHhc-CCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHHHHhhccccccCCCCCCCCHHH
Confidence 2345678999998776 568999999999999999985 665444333222110 00 111122233456789
Q ss_pred HHHHHHccCCCCCCCCCHHHHHh
Q 001059 637 ESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.+||.+||+.||.+||++.++++
T Consensus 270 ~~li~~cl~~~p~~Rp~~~~i~~ 292 (296)
T cd05095 270 YKLMLSCWRRNAKERPSFQEIHA 292 (296)
T ss_pred HHHHHHHcCCCcccCCCHHHHHH
Confidence 99999999999999999999976
|
Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit |
| >cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-32 Score=308.85 Aligned_cols=249 Identities=25% Similarity=0.381 Sum_probs=197.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++|+.++.||.|+||+||+|+++.+ .+.||+|.+.... .......+.+|+.++++++||||+++++.+.+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 79 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK-DENLQSEFRRELDMFRKLSHKNVVRLLGLCRE---- 79 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc-chHHHHHHHHHHHHHHhcCCcceeeeEEEECC----
Confidence 6789999999999999999998643 4679999875432 22345679999999999999999999987622
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---------CCCHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------HFDKELAWHLF 499 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------~l~e~~~~~i~ 499 (1170)
....|++|||++ ++|.+++.... .+++..+..++
T Consensus 80 ------------------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~ 123 (275)
T cd05046 80 ------------------------------------AEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALC 123 (275)
T ss_pred ------------------------------------CCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHH
Confidence 345799999997 69999987655 68999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
.||+.||+|||++||+||||||+|||++.++.++|+|||++....... ........+++.|+|||.
T Consensus 124 ~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~--------------~~~~~~~~~~~~y~~PE~ 189 (275)
T cd05046 124 TQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSE--------------YYKLRNALIPLRWLAPEA 189 (275)
T ss_pred HHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCccc--------------ccccCCceeEEeecChhh
Confidence 999999999999999999999999999999999999999987432111 111233467788999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
+.+ ..++.++||||||+++|+|++ ||...................+ .....+..+.+++.+||+.+|.+|||+.
T Consensus 190 ~~~-~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~i~~~l~~~p~~Rp~~~ 267 (275)
T cd05046 190 VQE-DDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP-VPEGCPSRLYKLMTRCWAVNPKDRPSFS 267 (275)
T ss_pred hcc-CCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCC-CCCCCCHHHHHHHHHHcCCCcccCCCHH
Confidence 887 457899999999999999986 7765544444333322222221 2234567899999999999999999999
Q ss_pred HHHhc
Q 001059 656 ELLQD 660 (1170)
Q Consensus 656 eiL~~ 660 (1170)
++++.
T Consensus 268 ~~l~~ 272 (275)
T cd05046 268 ELVSA 272 (275)
T ss_pred HHHHH
Confidence 99875
|
Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s |
| >KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-33 Score=321.77 Aligned_cols=244 Identities=23% Similarity=0.359 Sum_probs=203.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccC--Cc--EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLD--GR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~t--g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..+.+.||.|.||.||+|....- |. .||||.-+ .++.....+.|+.|..+|++++|||||+++|.|.+
T Consensus 391 Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK-~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e------- 462 (974)
T KOG4257|consen 391 ITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCK-TDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE------- 462 (974)
T ss_pred ccHHHhhcCCcccceeeeEecccccCcceeeeeehhc-cCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-------
Confidence 34456899999999999997522 33 58888765 44666678899999999999999999999999843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...|||||+++ |.|..+|+.+. .++......|++||+.||+|||
T Consensus 463 ----------------------------------~P~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe 508 (974)
T KOG4257|consen 463 ----------------------------------QPMWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE 508 (974)
T ss_pred ----------------------------------cceeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH
Confidence 34699999998 79999998654 6888999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
|.++|||||-.+|||+.+..-|||+|||+++.+....+.. .+...-..-|||||.+.- ..++.++
T Consensus 509 SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYk--------------aS~~kLPIKWmaPESINf-RrFTtAS 573 (974)
T KOG4257|consen 509 SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYK--------------ASRGKLPIKWMAPESINF-RRFTTAS 573 (974)
T ss_pred hhchhhhhhhhhheeecCcceeeecccchhhhccccchhh--------------ccccccceeecCccccch-hcccchh
Confidence 9999999999999999999999999999999876544322 122233457999998875 5799999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||.|||++||++. ||.+..+......+ +++..+|.+++++|.+..|+.+||+.||.+||++.+|..
T Consensus 574 DVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~i--EnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~ 644 (974)
T KOG4257|consen 574 DVWMFGVCMWEILSLGVKPFQGVKNSDVIGHI--ENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKA 644 (974)
T ss_pred hHHHHHHHHHHHHHhcCCccccccccceEEEe--cCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHH
Confidence 99999999999985 99877665443322 367778888899999999999999999999999999865
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=328.07 Aligned_cols=244 Identities=23% Similarity=0.349 Sum_probs=197.9
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
...+.++|++...+|.|+|+.|-.|.+..+++.+++|++..... +..+|+.++... +||||+++++.+.
T Consensus 317 ~~~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~------~~~~e~~~~~~~~~h~niv~~~~v~~---- 386 (612)
T KOG0603|consen 317 TAPFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD------DNQDEIPISLLVRDHPNIVKSHDVYE---- 386 (612)
T ss_pred cCCcchhhccccccCCCCccceeeeeccccccchhheecccccc------ccccccchhhhhcCCCcceeecceec----
Confidence 34567899999999999999999999999999999999975521 234577665555 8999999998772
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
+..+.|+|||++.| -+.+.+.....+. .++..|+.+|+.|+.
T Consensus 387 ------------------------------------~~~~~~~v~e~l~g~ell~ri~~~~~~~-~e~~~w~~~lv~Av~ 429 (612)
T KOG0603|consen 387 ------------------------------------DGKEIYLVMELLDGGELLRRIRSKPEFC-SEASQWAAELVSAVD 429 (612)
T ss_pred ------------------------------------CCceeeeeehhccccHHHHHHHhcchhH-HHHHHHHHHHHHHHH
Confidence 35788999999975 5555555544444 788889999999999
Q ss_pred HHHhCCccccCCCCCceee-cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFF-DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi-~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
|||++|+|||||||+|||+ ++.++++|+|||.++.+... ..+.+-|..|.|||++.. ..|
T Consensus 430 ~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~------------------~~tp~~t~~y~APEvl~~-~~y 490 (612)
T KOG0603|consen 430 YLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS------------------CDTPALTLQYVAPEVLAI-QEY 490 (612)
T ss_pred HHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh------------------hcccchhhcccChhhhcc-CCC
Confidence 9999999999999999999 58899999999999976432 123478899999999996 779
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+++|||||||++||+|++ ||........... ....++.-..++.++++||.+||+.||.+||++.+++.|+|+
T Consensus 491 t~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~----~i~~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~ 566 (612)
T KOG0603|consen 491 TEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHT----RIQMPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAHPWF 566 (612)
T ss_pred CcchhhHHHHHHHHHHHhCCCccccCCchHHHHH----hhcCCccccccCHHHHHHHHHhccCChhhCcChhhhccCcch
Confidence 999999999999999997 6654444322222 222233336678899999999999999999999999999999
|
|
| >cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=309.53 Aligned_cols=251 Identities=20% Similarity=0.263 Sum_probs=198.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++.+.||+|+||.||+|.+.. ++..|++|.+.. .........+.+|+.+++.++||||+++++++.+.
T Consensus 5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~-~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~--- 80 (280)
T cd05043 5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKD-HASEIQVTLLLQESCLLYGLSHQNILPILHVCIED--- 80 (280)
T ss_pred hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccC-CCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC---
Confidence 3689999999999999999999985 368899998863 33444567789999999999999999999887431
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------CCCCHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFR 500 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~e~~~~~i~~ 500 (1170)
....+++++|++ ++|.+++... ..+++..++.++.
T Consensus 81 ------------------------------------~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~ 124 (280)
T cd05043 81 ------------------------------------GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAI 124 (280)
T ss_pred ------------------------------------CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHH
Confidence 245689999997 6999888653 4589999999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
||+.||+|||+++++||||||+||+++.++.+||+|||+++.+...... .......++..|+|||++
T Consensus 125 ~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~-------------~~~~~~~~~~~y~apE~~ 191 (280)
T cd05043 125 QIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYH-------------CLGDNENRPVKWMALESL 191 (280)
T ss_pred HHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceE-------------EeCCCCCcchhccCHHHH
Confidence 9999999999999999999999999999999999999999865322100 011223467789999999
Q ss_pred cCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 581 QGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 581 ~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
.+ ..++.++|||||||++||+++ ||......+... .+. ....++.....++++.+++.+||..||++|||+.+
T Consensus 192 ~~-~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ 268 (280)
T cd05043 192 VN-KEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAA-YLK-DGYRLAQPINCPDELFAVMACCWALDPEERPSFSQ 268 (280)
T ss_pred hc-CCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHH-HHH-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHH
Confidence 87 568999999999999999986 676554433322 222 22222333455778999999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+++.
T Consensus 269 ~~~~ 272 (280)
T cd05043 269 LVQC 272 (280)
T ss_pred HHHH
Confidence 9863
|
Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It |
| >cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-33 Score=312.69 Aligned_cols=235 Identities=20% Similarity=0.331 Sum_probs=183.9
Q ss_pred eeeccCCcEEEEEEEEccCCc-------EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGR-------HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~-------~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.||.|+||.||+|.++.++. .||+|.+.... ....+.+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~-------- 70 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH--RNYSESFFEAASMMSQLSHKHLVLNYGVCVC-------- 70 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh--HHHHHHHHHHHHHHHhCCCCChhheeeEEEe--------
Confidence 369999999999999875544 48888875322 2345678899999999999999999988743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....++|||||+ ++|.+++.... .+++..+..++.||+.||+|||+
T Consensus 71 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~ 118 (258)
T cd05078 71 --------------------------------GDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLED 118 (258)
T ss_pred --------------------------------CCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 235689999997 58999887644 58999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCC--------EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 512 QGIIHRDLTPNNIFFDARND--------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~--------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
+||+||||||+|||++.++. ++++|||++..... .....+++.|+|||++.+.
T Consensus 119 ~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~~~~~ 179 (258)
T cd05078 119 KGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLP-------------------KEILLERIPWVPPECIENP 179 (258)
T ss_pred CCeecCCCccceEEEecccccccCCCceEEecccccccccCC-------------------chhccccCCccCchhccCC
Confidence 99999999999999987765 69999998864321 1234678899999999875
Q ss_pred CCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..++.++|||||||++|||++ ||...... ...........+|. ..++++.++|.+||+.||++|||++++++
T Consensus 180 ~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~il~ 255 (258)
T cd05078 180 QNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ-KKLQFYEDRHQLPA---PKWTELANLINQCMDYEPDFRPSFRAIIR 255 (258)
T ss_pred CCCCchhhHHHHHHHHHHHHcCCCCChhhccHH-HHHHHHHccccCCC---CCcHHHHHHHHHHhccChhhCCCHHHHHH
Confidence 568999999999999999997 33322222 22222222223332 34568999999999999999999999997
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
.
T Consensus 256 ~ 256 (258)
T cd05078 256 D 256 (258)
T ss_pred h
Confidence 4
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity |
| >KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-34 Score=298.38 Aligned_cols=263 Identities=24% Similarity=0.346 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-++|++.+.||.|||+.||++.+..++..||+|++.+.. .+..+...+|+...++++|||+++++++.+...
T Consensus 20 ~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~--~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~------ 91 (302)
T KOG2345|consen 20 NKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS--QEDIEEALREIDNHRKFNSPNVLRLVDHQLREE------ 91 (302)
T ss_pred CceEEEeeeecCCCceeeeeecccCcccchhhheeeccc--hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhh------
Confidence 468999999999999999999999999999999998654 356778999999999999999999886543210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.......||++.|.. |+|.+.+... ..+++.+++.++.+|++||++
T Consensus 92 -----------------------------~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~ 142 (302)
T KOG2345|consen 92 -----------------------------KDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEA 142 (302)
T ss_pred -----------------------------ccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHH
Confidence 012456899999985 8999988643 359999999999999999999
Q ss_pred HHhCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--C
Q 001059 509 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--P 584 (1170)
Q Consensus 509 LHs~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~ 584 (1170)
||+.. ++||||||.|||+++++.++|.|||.++.....-..+..... -.+..+..-|.-|.|||.+.-+ .
T Consensus 143 lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~------lQe~a~e~Ct~pyRAPELf~vk~~~ 216 (302)
T KOG2345|consen 143 LHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALR------LQEWAEERCTIPYRAPELFNVKSHC 216 (302)
T ss_pred HhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHH------HHHHHHHhCCCcccCchheecccCc
Confidence 99998 999999999999999999999999999864221100000000 0011233467889999987643 3
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHH--HHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQI--VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~--~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..+.++|||||||+||+|+. ||........ .+........+|... ..+..+.++|+.||+.||.+||++.+++.
T Consensus 217 ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~-~yse~l~~lik~mlqvdP~qRP~i~~ll~ 295 (302)
T KOG2345|consen 217 TITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSS-RYSEALHQLIKSMLQVDPNQRPTIPELLS 295 (302)
T ss_pred ccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCC-CccHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence 47899999999999999984 8864433111 111122222334332 36778899999999999999999999987
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
+
T Consensus 296 ~ 296 (302)
T KOG2345|consen 296 K 296 (302)
T ss_pred H
Confidence 5
|
|
| >cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=311.38 Aligned_cols=248 Identities=22% Similarity=0.302 Sum_probs=192.6
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+|++.+.||+|+||.||+|.+.. ....+|+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 74 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKEN-ASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQ----- 74 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCC-CCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEec-----
Confidence 47888999999999999999753 2357888888643 333445678999999999999999999988732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------------
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------------- 487 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------------- 487 (1170)
....|++|||++ ++|.+++...
T Consensus 75 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 119 (290)
T cd05045 75 -----------------------------------DGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNP 119 (290)
T ss_pred -----------------------------------CCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCc
Confidence 234689999997 6898887542
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 001059 488 --DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565 (1170)
Q Consensus 488 --~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1170)
..+++..++.++.|++.||+|||++||+||||||+|||+++++.+||+|||+++....... ....
T Consensus 120 ~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~ 186 (290)
T cd05045 120 DERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDS-------------YVKR 186 (290)
T ss_pred cccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccc-------------hhcc
Confidence 2478889999999999999999999999999999999999999999999999976422110 0011
Q ss_pred cccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHH
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 641 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~ 641 (1170)
....++..|+|||++.+ ..++.++||||||+++|||++ ||......... .... ....++.....+.++.+++.
T Consensus 187 ~~~~~~~~y~apE~~~~-~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~i~ 263 (290)
T cd05045 187 SKGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLF-NLLK-TGYRMERPENCSEEMYNLML 263 (290)
T ss_pred cCCCCCccccCHHHHcc-CCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHh-CCCCCCCCCCCCHHHHHHHH
Confidence 22346778999999877 568999999999999999986 66554443322 2222 22222233456679999999
Q ss_pred HccCCCCCCCCCHHHHHhc
Q 001059 642 RLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~ 660 (1170)
+||+.+|.+||++.++++.
T Consensus 264 ~cl~~~P~~Rp~~~~i~~~ 282 (290)
T cd05045 264 TCWKQEPDKRPTFADISKE 282 (290)
T ss_pred HHccCCcccCCCHHHHHHH
Confidence 9999999999999999863
|
Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi |
| >cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-32 Score=305.92 Aligned_cols=246 Identities=22% Similarity=0.285 Sum_probs=187.0
Q ss_pred eeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.||+|+||.||+|.+.. ++..||+|.+... ........+.+|+.+++.++||||+++++++...
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----------- 68 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRI-TDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPS----------- 68 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCcc-CCHHHHHHHHHHHHHHccCCCCCcceEEEEeecC-----------
Confidence 368999999999999753 3457999987532 2333456788999999999999999999876321
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
....+++|||+. ++|.+++... ..+++..+..++.||+.||+|||+++++
T Consensus 69 ----------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~ 120 (262)
T cd05058 69 ----------------------------EGSPLVVLPYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFV 120 (262)
T ss_pred ----------------------------CCCcEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 234689999996 6999998754 3467788889999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||+|||++.++.+||+|||+++......... ........+++.|+|||.+.+ ..++.++|||||
T Consensus 121 H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~sl 188 (262)
T cd05058 121 HRDLAARNCMLDESFTVKVADFGLARDIYDKEYYS-----------VHNHTGAKLPVKWMALESLQT-QKFTTKSDVWSF 188 (262)
T ss_pred ccccCcceEEEcCCCcEEECCccccccccCCccee-----------ecccccCcCCccccChhHhcc-CccchHHHHHHH
Confidence 99999999999999999999999997543211000 001123356788999999877 568999999999
Q ss_pred HHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 596 GIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 596 GviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||++|||++ ||......+.... +. .+..++.....++.+.+++.+||..+|++||++.++++.
T Consensus 189 G~~l~el~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~ 255 (262)
T cd05058 189 GVLLWELMTRGAPPYPDVDSFDITVY-LL-QGRRLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSR 255 (262)
T ss_pred HHHHHHHHcCCCCCCCCCCHHHHHHH-Hh-cCCCCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999986 4443333332222 22 222232233456789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca |
| >cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=311.12 Aligned_cols=260 Identities=26% Similarity=0.419 Sum_probs=204.2
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
+|++.+.||.|+||.||+|.+. .+|..||+|+++.... .....+.+.+|+.+++.+ +||||+++++++.
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~----- 75 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQ----- 75 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEee-----
Confidence 4789999999999999999985 4789999999874322 122345678899999999 6999999997762
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++|||++ ++|.+++.....+++..+..++.||+.||.|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~ 120 (290)
T cd05613 76 -----------------------------------TDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEH 120 (290)
T ss_pred -----------------------------------cCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2356899999997 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~ 587 (1170)
||++|++||||||+|||++.++.+||+|||++........ .......|+..|+|||.+.+. ..++
T Consensus 121 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (290)
T cd05613 121 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEV--------------ERAYSFCGTIEYMAPDIVRGGDGGHD 186 (290)
T ss_pred HHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccc--------------cccccccCCcccCChhhccCCCCCCC
Confidence 9999999999999999999999999999999976432110 011235689999999998752 2467
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATE 656 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~e 656 (1170)
.++||||||+++|+|++ ||..... ......... . ..++.....++.+.+++.+||+.||.+|| ++++
T Consensus 187 ~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~ 264 (290)
T cd05613 187 KAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRIL-K-SEPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADE 264 (290)
T ss_pred ccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhh-c-cCCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHH
Confidence 89999999999999997 6642211 111111111 1 11222334567899999999999999997 8999
Q ss_pred HHhccCCCCchHHHH
Q 001059 657 LLQDALPPQMEYELL 671 (1170)
Q Consensus 657 iL~~~~~~~~~~~~~ 671 (1170)
++.|+|+....++.+
T Consensus 265 l~~~~~~~~~~~~~~ 279 (290)
T cd05613 265 IKKHPFFQKINWDDL 279 (290)
T ss_pred HHcCcccccCCHHHH
Confidence 999999999886544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph |
| >cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=305.32 Aligned_cols=243 Identities=24% Similarity=0.350 Sum_probs=192.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||.||+|.+..+ ..+|+|.+..... ..+.+.+|+.+++.++||||+++++++.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~-~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~---------- 71 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGT-TKVAIKTLKPGTM---MPEAFLQEAQIMKKLRHDKLVPLYAVVS---------- 71 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCC-ceEEEEEcccCCc---cHHHHHHHHHHHHhCCCCCeeeEEEEEc----------
Confidence 5689999999999999999998744 4699998764332 2456889999999999999999987751
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|++|||++ ++|.+++.... .+++..+..++.||+.||+|||+
T Consensus 72 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~ 120 (260)
T cd05069 72 -------------------------------EEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIER 120 (260)
T ss_pred -------------------------------CCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 123589999997 58999987543 47899999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|++||||||+||+++.++.++|+|||+++....... .......++..|+|||.+.+ ..++.++|
T Consensus 121 ~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~~Pe~~~~-~~~~~~~D 185 (260)
T cd05069 121 MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKSD 185 (260)
T ss_pred CCEeecccCcceEEEcCCCeEEECCCccceEccCCcc--------------cccCCCccchhhCCHHHhcc-CCcChHHH
Confidence 9999999999999999999999999999976532110 00122346778999999876 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||++|||++ ||......+..... .. ...++.....+..+.+++++||.+||.+||+++++++
T Consensus 186 i~slG~~l~el~t~g~~p~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~ 255 (260)
T cd05069 186 VWSFGILLTELVTKGRVPYPGMVNREVLEQV-ER-GYRMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQS 255 (260)
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH-Hc-CCCCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 9999999999996 67654444333322 22 2222333456678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an |
| >cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6e-33 Score=309.93 Aligned_cols=235 Identities=16% Similarity=0.249 Sum_probs=180.0
Q ss_pred eeeccCCcEEEEEEEEccC------------CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 361 QPLGHGGFGHVVLCKNKLD------------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~t------------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
+.||+|+||.||+|++... ...+|+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~--- 75 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH--RDISLAFFETASMMRQVSHKHIVLLYGVCVR--- 75 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEec---
Confidence 3689999999999986422 2358889875432 2344578889999999999999999988743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL 506 (1170)
....+++|||+++ +|..++.. ...+++..++.++.||+.||
T Consensus 76 -------------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l 118 (262)
T cd05077 76 -------------------------------------DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASAL 118 (262)
T ss_pred -------------------------------------CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 2345899999974 77777664 35689999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCC-------EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARND-------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~-------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
+|||++||+||||||+|||++.++. +|++|||++..... .....++..|+|||+
T Consensus 119 ~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~-------------------~~~~~~~~~y~aPE~ 179 (262)
T cd05077 119 SYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLS-------------------RQECVERIPWIAPEC 179 (262)
T ss_pred HHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccC-------------------cccccccccccChhh
Confidence 9999999999999999999987654 89999999865321 123467889999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
+.....++.++|||||||++|||++ ||......+.. .... ...+ .....++++.+||.+||+.||.+||++.
T Consensus 180 ~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~--~~~~-~~~~~~~~~~~li~~cl~~dp~~Rp~~~ 255 (262)
T cd05077 180 VEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYE--GQCM-LVTPSCKELADLMTHCMNYDPNQRPFFR 255 (262)
T ss_pred hcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHh--cCcc-CCCCChHHHHHHHHHHcCCChhhCcCHH
Confidence 8754668999999999999999973 55443222211 1111 1111 1122346889999999999999999999
Q ss_pred HHHhc
Q 001059 656 ELLQD 660 (1170)
Q Consensus 656 eiL~~ 660 (1170)
+|+++
T Consensus 256 ~il~~ 260 (262)
T cd05077 256 AIMRD 260 (262)
T ss_pred HHHHh
Confidence 99975
|
Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom |
| >cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-32 Score=306.73 Aligned_cols=247 Identities=24% Similarity=0.343 Sum_probs=196.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|.+.+.||.|+||.||+|.+... ...||||...... .....+.+.+|+.+++.++||||+++++++..
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~-~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~------ 78 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCT-SPSVREKFLQEAYIMRQFDHPHIVKLIGVITE------ 78 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCchhceeEEEcC------
Confidence 5688999999999999999998644 3468999876432 23445678999999999999999999987621
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...|++|||++ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 79 -----------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~l 123 (270)
T cd05056 79 -----------------------------------NPVWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYL 123 (270)
T ss_pred -----------------------------------CCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 23589999996 59999987644 589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|++||||||+|||++.++.+||+|||+++....... ...+...+++.|+|||.+.+ ..++.+
T Consensus 124 H~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 188 (270)
T cd05056 124 ESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESY--------------YKASKGKLPIKWMAPESINF-RRFTSA 188 (270)
T ss_pred HhCCeeccccChheEEEecCCCeEEccCceeeecccccc--------------eecCCCCccccccChhhhcc-CCCCch
Confidence 999999999999999999999999999999976532210 01122235578999999876 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||......+...... .+..++.....++++.++|.+||..+|.+|||+.+++..
T Consensus 189 ~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~ 261 (270)
T cd05056 189 SDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQ 261 (270)
T ss_pred hhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999884 786665554443332 222333344567899999999999999999999999864
|
Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions |
| >cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=314.18 Aligned_cols=249 Identities=21% Similarity=0.324 Sum_probs=193.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
++|.+.+.||+|+||.||+|++.. .+..+|+|.++... .......+.+|+.+++.+ +||||+++++++..
T Consensus 12 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (314)
T cd05099 12 DRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA-TDKDLADLISEMELMKLIGKHKNIINLLGVCTQ- 89 (314)
T ss_pred HHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC-ChHHHHHHHHHHHHHHhccCCCCeeeEEEEEcc-
Confidence 578899999999999999998642 34579999886432 233456788999999999 69999999988732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CC
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DH 489 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~ 489 (1170)
...+|++|||++ ++|.+++... ..
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (314)
T cd05099 90 ---------------------------------------EGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ 130 (314)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccc
Confidence 345799999997 5999988653 24
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
++...+..++.||+.||.|||++|++||||||+|||++.++.+||+|||+++........ .......
T Consensus 131 l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~-------------~~~~~~~ 197 (314)
T cd05099 131 LSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYY-------------KKTSNGR 197 (314)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccc-------------cccccCC
Confidence 788899999999999999999999999999999999999999999999999865321100 0011123
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
+++.|||||++.+ ..++.++|||||||++|||++ ||......+... .+. ....+......+.++.++|.+||+
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (314)
T cd05099 198 LPVKWMAPEALFD-RVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFK-LLR-EGHRMDKPSNCTHELYMLMRECWH 274 (314)
T ss_pred CCccccCHHHHcc-CCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHH-cCCCCCCCCCCCHHHHHHHHHHcC
Confidence 4568999999887 568999999999999999986 565443333322 222 222222334556789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 001059 646 PSPSDRPSATELLQD 660 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~ 660 (1170)
.||.+|||+.++++.
T Consensus 275 ~~p~~Rps~~~ll~~ 289 (314)
T cd05099 275 AVPTQRPTFKQLVEA 289 (314)
T ss_pred CCcccCcCHHHHHHH
Confidence 999999999999864
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=302.43 Aligned_cols=245 Identities=24% Similarity=0.409 Sum_probs=193.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|++.+.||.|+||.||+|.+. ++..+|+|.+...... ...+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~-~~~~~~~k~~~~~~~~---~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------- 70 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWL-EKRKVAIKTIREGAMS---EEDFIEEAQVMMKLSHPKLVQLYGVCTE--------- 70 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEe-CCCeEEEEECCCCCCC---HHHHHHHHHHHHhCCCCCeeeEEEEEcc---------
Confidence 57899999999999999999886 5778999988643332 3568899999999999999999987632
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|++|||++ ++|.+++... ..++++.++.++.|++.||+|||++
T Consensus 71 -------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~ 119 (256)
T cd05112 71 -------------------------------RSPICLVFEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESS 119 (256)
T ss_pred -------------------------------CCceEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 345799999997 5888888654 4689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
+++||||||+||+++.++.+||+|||++........ .......++..|+|||.+.+ ..++.++||
T Consensus 120 ~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~~~aPe~~~~-~~~~~~~Dv 184 (256)
T cd05112 120 NVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWSSPEVFSF-SKYSSKSDV 184 (256)
T ss_pred CccccccccceEEEcCCCeEEECCCcceeecccCcc--------------cccCCCccchhhcCHhHhcc-CCcChHHHH
Confidence 999999999999999999999999999875421110 01122345678999999887 568999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||++|||++ ||........... +..... +......+..+.+|+.+||+.+|++|||+.+++++
T Consensus 185 ~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~ 254 (256)
T cd05112 185 WSFGVLMWEVFSEGKTPYENRSNSEVVET-INAGFR-LYKPRLASQSVYELMQHCWKERPEDRPSFSLLLHQ 254 (256)
T ss_pred HHHHHHHHHHHcCCCCCCCcCCHHHHHHH-HhCCCC-CCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence 999999999986 6655444333322 221111 11112345789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ |
| >cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=303.23 Aligned_cols=245 Identities=25% Similarity=0.365 Sum_probs=195.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. +++.||||.+...... ..++.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~-~~~~~~vK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 72 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWN-GTTKVAVKTLKPGTMS---PEAFLQEAQIMKKLRHDKLVQLYAVCSE-------- 72 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEc-CCceEEEEEecCCccC---HHHHHHHHHHHhhCCCCCEeeeeeeeec--------
Confidence 478999999999999999999986 5688999998754332 4578999999999999999999987622
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.... .+++..+..++.||+.||+|||
T Consensus 73 --------------------------------~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh 120 (261)
T cd05034 73 --------------------------------EEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE 120 (261)
T ss_pred --------------------------------CCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 58999987643 6899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++|+||||+||+++.++.+||+|||++......... ......++..|+|||.+.+ ..++.++
T Consensus 121 ~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~--------------~~~~~~~~~~y~~PE~~~~-~~~~~~~ 185 (261)
T cd05034 121 SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYT--------------AREGAKFPIKWTAPEAANY-GRFTIKS 185 (261)
T ss_pred hCCcccCCcchheEEEcCCCCEEECccccceeccchhhh--------------hhhccCCCccccCHHHhcc-CCcCchh
Confidence 999999999999999999999999999999765321100 0112234678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|+|++ ||.............. .. .++.....++++.+++.+||+.+|.+||+++++++
T Consensus 186 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 256 (261)
T cd05034 186 DVWSFGILLTEIVTYGRVPYPGMTNREVLEQVER-GY-RMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQS 256 (261)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc-CC-CCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence 99999999999996 6655444333333222 21 22222344678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t |
| >cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-32 Score=306.09 Aligned_cols=245 Identities=24% Similarity=0.384 Sum_probs=185.0
Q ss_pred eeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||.||+|.+. .++..+|+|.++.... ......+.+|+.+++.++||||+++++++.+
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------------- 66 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS-VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTE------------- 66 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC-------------
Confidence 36899999999999865 3456899998865432 2334578899999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++ ++|.+++.... ..++..+..++.|++.||+|||++
T Consensus 67 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~ 119 (269)
T cd05087 67 ---------------------------VTPYLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN 119 (269)
T ss_pred ---------------------------CCCcEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC
Confidence 345789999997 69999886432 356778889999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC------CC
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP------KI 586 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~------~~ 586 (1170)
|++||||||+||+++.++++||+|||+++...... .........|++.|+|||++.+.. .+
T Consensus 120 ~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~-------------~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 186 (269)
T cd05087 120 NFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKED-------------YYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQ 186 (269)
T ss_pred CEeccccCcceEEEcCCCcEEECCccccccccCcc-------------eeecCCCcCCcccccCHhHhccccccccccCC
Confidence 99999999999999999999999999987432111 011122346788999999986421 35
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhc-CCC--CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQK-GEL--PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~-~~~--p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+.++|||||||++|||++ ||......+......... ... |......++.+.++|.+|| .+|++|||+++|++
T Consensus 187 ~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~ 265 (269)
T cd05087 187 TKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQQLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL 265 (269)
T ss_pred CccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcccCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence 789999999999999985 776555444333222211 111 2222234567899999999 68999999999985
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
.
T Consensus 266 ~ 266 (269)
T cd05087 266 L 266 (269)
T ss_pred H
Confidence 3
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells |
| >PHA02882 putative serine/threonine kinase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=311.25 Aligned_cols=257 Identities=19% Similarity=0.308 Sum_probs=189.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhH---------HHHHHHHHHHHhccCCCceeEEEE
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVN---------DRILREVATLSRLQHQHVVRYYQA 422 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~---------~~~~~Ev~iL~~l~HpnIV~l~~~ 422 (1170)
++|++.+.||+|+||+||+|.+..+ +..+|+|+........... .....+...+..+.|+||++++++
T Consensus 12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~ 91 (294)
T PHA02882 12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC 91 (294)
T ss_pred CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence 6899999999999999999999877 6778888754433221110 112334455667799999999987
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQI 502 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI 502 (1170)
+.... ....+.|++|+++..++.+.+......++..++.++.||
T Consensus 92 ~~~~~------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi 135 (294)
T PHA02882 92 GSFKR------------------------------------CRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIMKDM 135 (294)
T ss_pred eeEec------------------------------------CCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHHHHH
Confidence 63210 112356889999988888877766667899999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.||+|||+++|+||||||+|||++.++.++|+|||+|+.+........ ..........||+.|+|||++.+
T Consensus 136 ~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~--------~~~~~~~~~~gt~~y~ape~~~~ 207 (294)
T PHA02882 136 LTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIE--------YSKEQKDLHRGTLYYAGLDAHNG 207 (294)
T ss_pred HHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccc--------cccccccccCCCccccCHHHhCC
Confidence 9999999999999999999999999999999999999986532210000 00011233479999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHH--------HHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIV--------LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~--------~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
..++.++|||||||++|||++ ||......... ...+. .+.. .....++++.++++.|+..+|.+|
T Consensus 208 -~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~r 283 (294)
T PHA02882 208 -ACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLH-EGKI--KIKNANKFIYDFIECVTKLSYEEK 283 (294)
T ss_pred -CCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhh-hhhh--ccCCCCHHHHHHHHHHHhCCCCCC
Confidence 568999999999999999996 88655221111 11111 1111 123345789999999999999999
Q ss_pred CCHHHHHh
Q 001059 652 PSATELLQ 659 (1170)
Q Consensus 652 Pta~eiL~ 659 (1170)
|++.++++
T Consensus 284 p~~~~l~~ 291 (294)
T PHA02882 284 PDYDALIK 291 (294)
T ss_pred CCHHHHHH
Confidence 99999986
|
|
| >cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-32 Score=300.87 Aligned_cols=241 Identities=23% Similarity=0.323 Sum_probs=189.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 440 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 440 (1170)
+.||.|+||.||+|... ++..||+|.++... .......+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~ig~g~~g~vy~~~~~-~~~~~a~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--------------- 63 (250)
T cd05085 1 ELLGKGNFGEVFKGTLK-DKTPVAVKTCKEDL-PQELKIKFLSEARILKQYDHPNIVKLIGVCTQ--------------- 63 (250)
T ss_pred CccCCCCCceEEEEEec-CCcEEEEEecCCcC-CHHHHHHHHHHHHHHHhCCCCCcCeEEEEEec---------------
Confidence 36899999999999865 78899999886432 33344578899999999999999999988732
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 441 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....+++|||++ ++|.+++... ..+++..++.++.|++.||.|||++|++|||
T Consensus 64 -------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~d 118 (250)
T cd05085 64 -------------------------RQPIYIVMELVPGGDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRD 118 (250)
T ss_pred -------------------------CCccEEEEECCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecc
Confidence 345799999996 5898887653 4589999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+||+++.++.+||+|||++........ .......+++.|+|||++.+ ..++.++||||||++
T Consensus 119 l~p~nili~~~~~~~l~d~g~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~l 183 (250)
T cd05085 119 LAARNCLVGENNVLKISDFGMSRQEDDGIY--------------SSSGLKQIPIKWTAPEALNY-GRYSSESDVWSYGIL 183 (250)
T ss_pred cChheEEEcCCCeEEECCCccceecccccc--------------ccCCCCCCcccccCHHHhcc-CCCCchhHHHHHHHH
Confidence 999999999999999999999875321110 00112244678999999987 568999999999999
Q ss_pred HHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 599 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 599 L~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|+|++ ||............ . ...........++.+.+++.+||+.+|.+||++.++++.
T Consensus 184 l~~~~~~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 247 (250)
T cd05085 184 LWETFSLGVCPYPGMTNQQAREQV-E-KGYRMSCPQKCPDDVYKVMQRCWDYKPENRPKFSELQKE 247 (250)
T ss_pred HHHHhcCCCCCCCCCCHHHHHHHH-H-cCCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHH
Confidence 999986 77655443332222 2 222223334566799999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c |
| >cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.3e-33 Score=310.61 Aligned_cols=234 Identities=18% Similarity=0.270 Sum_probs=181.0
Q ss_pred eeccCCcEEEEEEEEccCC------------------------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCce
Q 001059 362 PLGHGGFGHVVLCKNKLDG------------------------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg------------------------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV 417 (1170)
.||+|+||.||+|.+..++ ..||+|++.... ......+.+|+.+++.++||||+
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~--~~~~~~~~~~~~~~~~l~h~niv 79 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSH--RDIALAFFETASLMSQVSHIHLA 79 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHH--HHHHHHHHHHHHHHhcCCCCCee
Confidence 6999999999999864322 358899875432 23446788999999999999999
Q ss_pred eEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHH
Q 001059 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELA 495 (1170)
Q Consensus 418 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~ 495 (1170)
++++++.+ ....|+|||||+ ++|..++.. .+.+++..+
T Consensus 80 ~~~~~~~~----------------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~ 119 (274)
T cd05076 80 FVHGVCVR----------------------------------------GSENIMVEEFVEHGPLDVCLRKEKGRVPVAWK 119 (274)
T ss_pred eEEEEEEe----------------------------------------CCceEEEEecCCCCcHHHHHHhcCCCCCHHHH
Confidence 99998743 345689999997 478887765 456899999
Q ss_pred HHHHHHHHHHHHHHHhCCccccCCCCCceeecCCC-------CEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 496 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 496 ~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
..++.||+.||+|||++||+||||||+|||++.++ .+|++|||++..... ....
T Consensus 120 ~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~-------------------~~~~ 180 (274)
T cd05076 120 ITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALS-------------------REER 180 (274)
T ss_pred HHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCcccccccc-------------------cccc
Confidence 99999999999999999999999999999997643 389999998864311 1223
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.+++.|+|||.+.+...++.++|||||||++|||++ ||......+.. .........|. ...+++.++|.+||
T Consensus 181 ~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~li~~cl 256 (274)
T cd05076 181 VERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKE-RFYEKKHRLPE---PSCKELATLISQCL 256 (274)
T ss_pred ccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHH-HHHHhccCCCC---CCChHHHHHHHHHc
Confidence 577889999998765568999999999999999962 66544333221 11222222232 23468999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.+|.+|||+.+++++
T Consensus 257 ~~~p~~Rps~~~il~~ 272 (274)
T cd05076 257 TYEPTQRPSFRTILRD 272 (274)
T ss_pred ccChhhCcCHHHHHHh
Confidence 9999999999999975
|
Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt |
| >cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-32 Score=312.50 Aligned_cols=249 Identities=22% Similarity=0.349 Sum_probs=195.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|+..+.||+|+||.||+|.+..+|. .||+|.+.... .......+.+|+.+++.++||||+++++.|..
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~---- 80 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT-GPKANVEFMDEALIMASMDHPHLVRLLGVCLS---- 80 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC-CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcC----
Confidence 4688999999999999999999987776 46888876432 22334568899999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~ 507 (1170)
...++++||++ |+|.+.+.... .+++..++.++.||+.||+
T Consensus 81 -------------------------------------~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~ 123 (303)
T cd05110 81 -------------------------------------PTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMM 123 (303)
T ss_pred -------------------------------------CCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 12468899997 68998887644 5899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... ........++..|+|||.+.+ ..++
T Consensus 124 ~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~ 189 (303)
T cd05110 124 YLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEK-------------EYNADGGKMPIKWMALECIHY-RKFT 189 (303)
T ss_pred HHhhcCeeccccccceeeecCCCceEEccccccccccCccc-------------ccccCCCccccccCCHHHhcc-CCCC
Confidence 99999999999999999999999999999999986532110 001123356788999999887 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||........ ...+. .+..++.....+..+.+++.+||..+|++||++.++++.
T Consensus 190 ~~~DiwslG~~l~el~t~g~~p~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~ 264 (303)
T cd05110 190 HQSDVWSYGVTIWELMTFGGKPYDGIPTREI-PDLLE-KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAE 264 (303)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH-HHHHH-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999975 6654433222 22222 333333334456789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin |
| >cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=306.03 Aligned_cols=239 Identities=23% Similarity=0.354 Sum_probs=185.8
Q ss_pred eeccCCcEEEEEEEEccCCc--EEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDGR--HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
.||+|+||.||+|+++.+|. .+|+|.++. .......+.+.+|+.+++++ +||||+++++++..
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~-~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~------------- 67 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKE-YASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH------------- 67 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccc-cCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEec-------------
Confidence 68999999999999988876 468887752 23334456788999999999 89999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCCHHHHHHHHHH
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFDKELAWHLFRQ 501 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~e~~~~~i~~q 501 (1170)
...+|++|||++ ++|.+++.... .++++.++.++.|
T Consensus 68 ---------------------------~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 120 (270)
T cd05047 68 ---------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 120 (270)
T ss_pred ---------------------------CCCceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHH
Confidence 235699999997 69999886532 4788999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
++.||+|||++|++||||||+|||++.++.+||+|||++...... ........++.|+|||++.
T Consensus 121 i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfgl~~~~~~~----------------~~~~~~~~~~~y~apE~~~ 184 (270)
T cd05047 121 VARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLPVRWMAIESLN 184 (270)
T ss_pred HHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCCCccccchh----------------hhccCCCCccccCChHHHc
Confidence 999999999999999999999999999999999999998632100 0011123466899999987
Q ss_pred CCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+ ..++.++|||||||++|||++ ||............ . ....+......+.++.+++.+||+.||.+|||+.++
T Consensus 185 ~-~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~i 261 (270)
T cd05047 185 Y-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL-P-QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQI 261 (270)
T ss_pred c-CCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHH-h-CCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHH
Confidence 6 568999999999999999985 77544333332222 2 111222233456789999999999999999999999
Q ss_pred Hhc
Q 001059 658 LQD 660 (1170)
Q Consensus 658 L~~ 660 (1170)
++.
T Consensus 262 l~~ 264 (270)
T cd05047 262 LVS 264 (270)
T ss_pred HHH
Confidence 864
|
Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l |
| >cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=305.46 Aligned_cols=244 Identities=24% Similarity=0.383 Sum_probs=182.9
Q ss_pred eeeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~--tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
++||+|+||+||+|.... ....+|+|.+... ........+.+|+.+++.++||||+++++.+..
T Consensus 1 ~~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~-~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~------------- 66 (269)
T cd05042 1 DEIGNGWFGKVLLGEAHRGMSKARVVVKELRAS-ATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIE------------- 66 (269)
T ss_pred CcCCccCCceEEEEEEecCCCCeEEEEeecCcc-CChHHHHHHHHHHHHHHhCCCCCcceEEEEECC-------------
Confidence 369999999999997542 3457888877533 233345678899999999999999999988732
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-----HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-----~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||++ ++|.+++.... ..++..+..++.||+.||+|||++
T Consensus 67 ---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (269)
T cd05042 67 ---------------------------SIPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA 119 (269)
T ss_pred ---------------------------CCceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc
Confidence 345799999997 59999886543 246788899999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC------CCCC
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG------WPKI 586 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~~~ 586 (1170)
||+||||||+|||++.++.+||+|||++........ ........+++.|+|||++.. ...+
T Consensus 120 ~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~ 186 (269)
T cd05042 120 DFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDY-------------YITKDCHAVPLRWLAPELVEIRGQDLLPKDQ 186 (269)
T ss_pred CEecccccHhheEecCCCcEEEeccccccccccchh-------------eeccCCCCCcccccCHHHHhhcccccccccc
Confidence 999999999999999999999999999875321110 001123356788999998753 1346
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcC-CC--CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKG-EL--PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~-~~--p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+.++|||||||++|||++ ||....+.+.......... .+ |......++...+++..|| .||++|||+++++.
T Consensus 187 ~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~ 265 (269)
T cd05042 187 TKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVREQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE 265 (269)
T ss_pred chhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence 889999999999999996 6655544444333333221 11 2222345667888999998 59999999999986
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina |
| >smart00219 TyrKc Tyrosine kinase, catalytic domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-32 Score=300.73 Aligned_cols=245 Identities=25% Similarity=0.341 Sum_probs=195.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++.+.||.|+||.||+|.+..++ ..||+|+++... .......+.+|+..++.++||||+++++.+.+
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------- 72 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDA-DEQQIEEFLREARIMRKLDHPNIVKLLGVCTE------- 72 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCC-ChHHHHHHHHHHHHHHhcCCCchheEEEEEcC-------
Confidence 356789999999999999998766 899999986432 22245688999999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++|||++ ++|.+++..... +++..++.++.||+.||+||
T Consensus 73 ---------------------------------~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~l 119 (258)
T smart00219 73 ---------------------------------EEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYL 119 (258)
T ss_pred ---------------------------------CCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHH
Confidence 346899999997 599999876544 99999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+.|++||||||+||+++.++.++|+|||+++........ ......+++.|+|||.+.+ ..++.+
T Consensus 120 h~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~--------------~~~~~~~~~~y~~Pe~~~~-~~~~~~ 184 (258)
T smart00219 120 ESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYY--------------KKKGGKLPIRWMAPESLKD-GKFTSK 184 (258)
T ss_pred hcCCeeecccccceEEEccCCeEEEcccCCceeccccccc--------------ccccCCCcccccChHHhcc-CCCCcc
Confidence 9999999999999999999999999999999865322110 0011237889999999866 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
+||||||+++|+|++ ||............. ....++.....+.++.+++.+||+.||.+|||+.++++
T Consensus 185 ~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 256 (258)
T smart00219 185 SDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLK--KGYRLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVE 256 (258)
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--cCCCCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence 999999999999985 555433333332222 22233333446789999999999999999999999986
|
Phosphotransferases. Tyrosine-specific kinase subfamily. |
| >cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-32 Score=315.73 Aligned_cols=249 Identities=23% Similarity=0.337 Sum_probs=193.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-------CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-------GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
.+|++.+.||+|+||.||+|++... +..||+|.++.. ........+.+|+.+++++ +||||++++++|.+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 89 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD-ATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ- 89 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc-cCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEcc-
Confidence 4689999999999999999987532 236899988643 2333456789999999999 89999999988732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------C
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------H 489 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~ 489 (1170)
...+|++|||++ ++|.+++.... .
T Consensus 90 ---------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~ 130 (334)
T cd05100 90 ---------------------------------------DGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQ 130 (334)
T ss_pred ---------------------------------------CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence 345799999997 59999886532 3
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
++...+..++.||+.||+|||++|++||||||+|||++.++.+||+|||+++....... ........
T Consensus 131 l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~ 197 (334)
T cd05100 131 LTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDY-------------YKKTTNGR 197 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccc-------------cccccCCC
Confidence 77788999999999999999999999999999999999999999999999976432110 00112234
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
++..|+|||++.+ ..++.++|||||||++|||++ ||......... ..+. ....++.....+.++.++|.+||+
T Consensus 198 ~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~li~~cl~ 274 (334)
T cd05100 198 LPVKWMAPEALFD-RVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELF-KLLK-EGHRMDKPANCTHELYMIMRECWH 274 (334)
T ss_pred cCceEcCHHHhcc-CCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHH-HHHH-cCCCCCCCCCCCHHHHHHHHHHcc
Confidence 5678999999987 568999999999999999985 56544433332 2222 222223334556789999999999
Q ss_pred CCCCCCCCHHHHHhc
Q 001059 646 PSPSDRPSATELLQD 660 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~ 660 (1170)
.+|.+|||+.+++++
T Consensus 275 ~~p~~Rps~~ell~~ 289 (334)
T cd05100 275 AVPSQRPTFKQLVED 289 (334)
T ss_pred cChhhCcCHHHHHHH
Confidence 999999999999975
|
Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to |
| >cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=304.63 Aligned_cols=247 Identities=25% Similarity=0.368 Sum_probs=195.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+|++.+.||+|+||+||+|.++.+|. .+|+|.++... .......+.+|+.+++.++||||+++++++..
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~-~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREET-SPKANKEILDEAYVMASVDHPHVVRLLGICLS----- 80 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCC-CHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-----
Confidence 688999999999999999999887765 58999876432 33445678999999999999999999988731
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+++|||++ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 81 ------------------------------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 124 (279)
T cd05057 81 ------------------------------------SQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSY 124 (279)
T ss_pred ------------------------------------CceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 35689999996 6999988764 469999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++||||||+|||++.++.+||+|||+++.+..... ........++..|+|||.+.. ..++.
T Consensus 125 LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~ 190 (279)
T cd05057 125 LEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEK-------------EYHAEGGKVPIKWMALESILH-RIYTH 190 (279)
T ss_pred HHhCCEEecccCcceEEEcCCCeEEECCCcccccccCccc-------------ceecCCCcccccccCHHHhhc-CCcCc
Confidence 9999999999999999999999999999999986532110 001112234678999999876 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++|+|||||++||+++ ||......+... .+. .+...+.....+.++.+++.+||..||.+||++.++++
T Consensus 191 ~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~ 263 (279)
T cd05057 191 KSDVWSYGVTVWELMTFGAKPYEGIPAVEIPD-LLE-KGERLPQPPICTIDVYMVLVKCWMIDAESRPTFKELIN 263 (279)
T ss_pred hhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHH-HHh-CCCCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence 9999999999999986 665544433332 222 22222223345678999999999999999999999975
|
Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea |
| >cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-32 Score=303.41 Aligned_cols=233 Identities=19% Similarity=0.305 Sum_probs=183.3
Q ss_pred eeeccCCcEEEEEEEEccCC----------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 361 QPLGHGGFGHVVLCKNKLDG----------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg----------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+.||+|+||.||+|.+..++ ..+++|.+...... ...+.+|+.+++.++||||+++++++..
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 72 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD---SLAFFETASLMSQLSHKHLVKLYGVCVR----- 72 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh---HHHHHHHHHHHHcCCCcchhheeeEEec-----
Confidence 36899999999999998776 35788877543321 5678999999999999999999988732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+++|||++ ++|.+++.... .++...+..++.||+.||+|
T Consensus 73 ------------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 116 (259)
T cd05037 73 ------------------------------------DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHY 116 (259)
T ss_pred ------------------------------------CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHH
Confidence 23589999997 58999887665 79999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCC-------CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARN-------DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~-------~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||++||+||||||+|||++.++ .+||+|||++..... .....++..|+|||++.
T Consensus 117 LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~-------------------~~~~~~~~~y~aPE~~~ 177 (259)
T cd05037 117 LEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLS-------------------REERVERIPWIAPECIR 177 (259)
T ss_pred HhhCCeecccCccceEEEecCccccCCceeEEeCCCCccccccc-------------------ccccccCCCccChhhhc
Confidence 9999999999999999999887 799999999986421 12235677899999988
Q ss_pred CC-CCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 582 GW-PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 582 ~~-~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+. ..++.++|||||||++|||++ ||......... .........+.. ....+.++|.+||..+|.+|||+.+
T Consensus 178 ~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~li~~~l~~~p~~Rpt~~~ 253 (259)
T cd05037 178 NGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKE-RFYQDQHRLPMP---DCAELANLINQCWTYDPTKRPSFRA 253 (259)
T ss_pred CCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHH-HHHhcCCCCCCC---CchHHHHHHHHHhccChhhCCCHHH
Confidence 74 368999999999999999986 45443222211 111112222211 1268899999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+++.
T Consensus 254 il~~ 257 (259)
T cd05037 254 ILRD 257 (259)
T ss_pred HHHh
Confidence 9874
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki |
| >cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-32 Score=299.15 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=190.1
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSG 440 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g 440 (1170)
++||.|+||.||+|.+.. ++.||+|.+...... .....+.+|+.++++++||||+++++++..
T Consensus 1 ~~lg~g~~g~v~~~~~~~-~~~v~~K~~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~--------------- 63 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKG-NTEVAVKTCRSTLPP-DLKRKFLQEAEILKQYDHPNIVKLIGVCVQ--------------- 63 (251)
T ss_pred CccccCCCceEEEEEEeC-CCcEEEEeccccCCH-HHHHHHHHHHHHHHhCCCCCeEEEEEEEec---------------
Confidence 469999999999999986 999999988754332 345678999999999999999999987632
Q ss_pred cccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccC
Q 001059 441 TLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518 (1170)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrD 518 (1170)
....|++|||++ ++|.+++.. ...++...+..++.|++.||+|||+++++|||
T Consensus 64 -------------------------~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~d 118 (251)
T cd05041 64 -------------------------KQPIYIVMELVPGGSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRD 118 (251)
T ss_pred -------------------------CCCeEEEEEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhh
Confidence 346799999996 589988865 34688999999999999999999999999999
Q ss_pred CCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH
Q 001059 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598 (1170)
Q Consensus 519 LKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi 598 (1170)
|||+|||++.++.+||+|||++........ ........++..|+|||++.+ ..++.++|||||||+
T Consensus 119 i~p~nili~~~~~~~l~d~g~~~~~~~~~~-------------~~~~~~~~~~~~y~~PE~~~~-~~~~~~~Di~slG~i 184 (251)
T cd05041 119 LAARNCLVGENNVLKISDFGMSREEEGGIY-------------TVSDGLKQIPIKWTAPEALNY-GRYTSESDVWSYGIL 184 (251)
T ss_pred cCcceEEEcCCCcEEEeeccccccccCCcc-------------eeccccCcceeccCChHhhcc-CCCCcchhHHHHHHH
Confidence 999999999999999999999975431110 001112234677999999887 568999999999999
Q ss_pred HHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 599 FFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 599 L~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||++ ||........... +. ....++.....+.++.++|.+||+.+|.+|||+.++++.
T Consensus 185 ~~~l~t~~~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~ 248 (251)
T cd05041 185 LWETFSLGDTPYPGMSNQQTRER-IE-SGYRMPAPQLCPEEIYRLMLQCWAYDPENRPSFSEIYNE 248 (251)
T ss_pred HHHHHhccCCCCccCCHHHHHHH-Hh-cCCCCCCCccCCHHHHHHHHHHhccChhhCcCHHHHHHH
Confidence 999996 5654433322222 22 112222233456789999999999999999999999874
|
Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k |
| >cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-32 Score=306.02 Aligned_cols=253 Identities=28% Similarity=0.436 Sum_probs=195.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+|++.+.||+|+||.||+|.+.. ++..||||+++..... .....+.+|+.+++.++||||+++++++...
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~-~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~---- 78 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE-QHRSDFEREIEILRTLDHENIVKYKGVCEKP---- 78 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch-HHHHHHHHHHHHHHhCCCCChheEEeeeecC----
Confidence 467888999999999999999753 4889999999754433 3466899999999999999999999876331
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....+++|||++ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 79 ----------------------------------~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~ 124 (284)
T cd05038 79 ----------------------------------GGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDY 124 (284)
T ss_pred ----------------------------------CCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHH
Confidence 1356799999996 59999987654 59999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|++||||||+|||++.++.++|+|||++......... ........++..|+|||.+.+ ..++.
T Consensus 125 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~------------~~~~~~~~~~~~~~~Pe~~~~-~~~~~ 191 (284)
T cd05038 125 LGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDY------------YYVKEPGESPIFWYAPECLRT-SKFSS 191 (284)
T ss_pred HHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcc------------eeccCCCCCcccccCcHHHcc-CCCCc
Confidence 99999999999999999999999999999999865321100 000112345667999999877 46889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHH--------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMER--------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~--------------~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
++||||||+++|||++ ||...... ......+. .....+.....+.++.+++.+||+.+|.+|
T Consensus 192 ~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~R 270 (284)
T cd05038 192 ASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLELLK-EGERLPRPPSCPDEVYDLMKLCWEAEPQDR 270 (284)
T ss_pred ccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHHHHH-cCCcCCCCccCCHHHHHHHHHHhccChhhC
Confidence 9999999999999997 54432111 11111222 222222233455789999999999999999
Q ss_pred CCHHHHHhc
Q 001059 652 PSATELLQD 660 (1170)
Q Consensus 652 Pta~eiL~~ 660 (1170)
||+.++++.
T Consensus 271 pt~~ei~~~ 279 (284)
T cd05038 271 PSFADLILI 279 (284)
T ss_pred CCHHHHHHH
Confidence 999999864
|
Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut |
| >cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.5e-32 Score=302.32 Aligned_cols=244 Identities=21% Similarity=0.363 Sum_probs=183.3
Q ss_pred eeccCCcEEEEEEEEccCC--cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDG--RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGS 439 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg--~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~ 439 (1170)
.||+|+||+||+|....++ ..+++|.+.... .......+.+|+.+++.++||||+++++.|..
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~-------------- 66 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA-SSKEQNEFLQQGDPYRILQHPNILQCLGQCVE-------------- 66 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC-ChHHHHHHHHHHHHHhccCCcchhheEEEecC--------------
Confidence 6999999999999865332 346677665432 23345689999999999999999999988732
Q ss_pred CcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 440 GTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 440 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+|++||||+ ++|.+++... ..+++..++.++.||+.||+|||++++
T Consensus 67 --------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i 120 (268)
T cd05086 67 --------------------------AIPYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNF 120 (268)
T ss_pred --------------------------CCccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCe
Confidence 345799999997 5999988753 236677788999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC------CCCCc
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW------PKIDE 588 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~------~~~~~ 588 (1170)
+||||||+|||++.++.+||+|||++........ ........|++.|+|||++... ..++.
T Consensus 121 ~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~ 187 (268)
T cd05086 121 LHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDY-------------IETEDDKCVPLRWLAPELVGEFHGGLITAEQTK 187 (268)
T ss_pred eccCCccceEEEcCCccEEecccccccccCcchh-------------hhcccCCcCcccccCchhcccccCccccCCCCC
Confidence 9999999999999999999999999864211100 0112345788999999987531 23578
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCC---CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGE---LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~---~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||....+.+.....+..... .|......++.+.+++..|| .+|++||++.++++.
T Consensus 188 ~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~ 265 (268)
T cd05086 188 PSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQQVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHRL 265 (268)
T ss_pred cchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhcccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHHH
Confidence 9999999999999985 77655554444433332211 12223345678889999999 679999999999863
|
Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage |
| >cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11 | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-32 Score=303.34 Aligned_cols=249 Identities=29% Similarity=0.452 Sum_probs=195.5
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC---CCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~---~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+|.+.+.||+|+||.||++.+..++..+++|+++.. .........+.+|+.+++.++||||+++++++.+
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 73 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLE------- 73 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhc-------
Confidence 478899999999999999999887777777776532 2222334567789999999999999999877632
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+++|||++ ++|.+++.. ...+++..++.++.|++.||.
T Consensus 74 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (260)
T cd08222 74 ---------------------------------RDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVH 120 (260)
T ss_pred ---------------------------------CCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHH
Confidence 345799999997 488887753 346999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|++|+||||+||+++. +.+||+|||++........ ......|++.|+|||.+.+ ..++
T Consensus 121 ~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~-~~~~ 183 (260)
T cd08222 121 YMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSCD---------------LATTFTGTPYYMSPEALKH-QGYD 183 (260)
T ss_pred HHHHcCccccCCChhheEeec-CCEeecccCceeecCCCcc---------------cccCCCCCcCccCHHHHcc-CCCC
Confidence 999999999999999999975 6799999999876532110 1123468889999999876 5578
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++|+||||+++|+|++ ||............. .+..+......++++.++|.+||..+|++||++.++++|||+
T Consensus 184 ~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~ 260 (260)
T cd08222 184 SKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIV--EGPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI 260 (260)
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH--cCCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence 89999999999999996 665444333333322 233333334556789999999999999999999999999996
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check |
| >cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=307.23 Aligned_cols=259 Identities=28% Similarity=0.431 Sum_probs=202.3
Q ss_pred CceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCC--hhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~--~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
+|++.+.||+|+||.||+|.+. .++..||||+++..... ......+.+|+.++.++ +||||+++++++.
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~----- 75 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQ----- 75 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeee-----
Confidence 4889999999999999999864 46789999998743221 22345688999999999 6999999987762
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+||||++ ++|.+.+.....+++..++.++.|++.||.|
T Consensus 76 -----------------------------------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~ 120 (288)
T cd05583 76 -----------------------------------TDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDH 120 (288)
T ss_pred -----------------------------------cCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHH
Confidence 2356899999997 5999998877789999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-CCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~ 587 (1170)
||+.|++||||||+||+++.++.++|+|||+++...... ........|++.|+|||.+.+.. ..+
T Consensus 121 lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 186 (288)
T cd05583 121 LHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE--------------EERAYSFCGTIEYMAPEVIRGGSGGHD 186 (288)
T ss_pred HHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc--------------ccccccccCCccccCHHHhcCCCCCCc
Confidence 999999999999999999999999999999987643211 00112346899999999987632 368
Q ss_pred ccchhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC---HHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS---ATEL 657 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt---a~ei 657 (1170)
.++||||||+++|||++ ||.... ..+......... ++.....++.+.++|.+||+.||++||| +.++
T Consensus 187 ~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~ 263 (288)
T cd05583 187 KAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSK---PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEI 263 (288)
T ss_pred chhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccC---CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHH
Confidence 89999999999999997 664221 112222222212 2223345678999999999999999998 5677
Q ss_pred HhccCCCCchHHHH
Q 001059 658 LQDALPPQMEYELL 671 (1170)
Q Consensus 658 L~~~~~~~~~~~~~ 671 (1170)
|+|+|+....++.+
T Consensus 264 l~~~~~~~~~~~~~ 277 (288)
T cd05583 264 KNHPFFQGIDWDDL 277 (288)
T ss_pred hcCcccccCCHHHH
Confidence 99999999887544
|
Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines |
| >cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-32 Score=302.12 Aligned_cols=254 Identities=20% Similarity=0.264 Sum_probs=193.3
Q ss_pred ceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
|.+.+.||+|+||.||+|.++. +++.||||++..........+++.+|+.+++.++||||+++++.+.....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~----- 75 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRA----- 75 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCC-----
Confidence 5677899999999999998753 57899999997655455556778999999999999999999987743210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc------CCCCHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY------DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~------~~l~e~~~~~i~~qI~~gL 506 (1170)
.......+++++|+. ++|.+++... ..++...++.++.||+.||
T Consensus 76 -----------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l 126 (273)
T cd05074 76 -----------------------------KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGM 126 (273)
T ss_pred -----------------------------CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 001234578899996 6888776421 2478899999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+||+++.++.+||+|||+++....... ........+++.|++||.+.+ ..+
T Consensus 127 ~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~~~~pe~~~~-~~~ 192 (273)
T cd05074 127 EYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDY-------------YRQGCASKLPVKWLALESLAD-NVY 192 (273)
T ss_pred HHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcc-------------eecCCCccCchhhcCHhHHhc-Ccc
Confidence 999999999999999999999999999999999986532110 001122345678999999887 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||.............. ...+......++.+.+++.+||+.+|++||++.+++++
T Consensus 193 ~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~ 268 (273)
T cd05074 193 TTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIK--GNRLKQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQ 268 (273)
T ss_pred chhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHc--CCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 899999999999999986 5554433333222222 22222223456789999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac |
| >cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.5e-32 Score=298.92 Aligned_cols=242 Identities=32% Similarity=0.473 Sum_probs=198.2
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGT 441 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~ 441 (1170)
||.|+||.||++.+..+++.||+|++...... ......+.+|+.+++.++||||+++++.+.
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~----------------- 63 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQ----------------- 63 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHee-----------------
Confidence 69999999999999988999999998754332 224557889999999999999999987652
Q ss_pred ccccccccccccccccccccccccccEEEEEeecc-CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 442 LASSTFSNRAASSADVTGQENKLESTYLYIQMEYC-PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~-~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
....+|++|||+ +++|.+++.....+++..++.++.||+.||.|||+++++|+|||
T Consensus 64 -----------------------~~~~~~~v~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~ 120 (250)
T cd05123 64 -----------------------TEEKLYLVLEYAPGGELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLK 120 (250)
T ss_pred -----------------------cCCeeEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCC
Confidence 246789999999 56999999887789999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+||+++.++.++|+|||++....... .......++..|+|||.+.+ ...+.++|+||||+++|
T Consensus 121 p~ni~~~~~~~~~l~d~~~~~~~~~~~---------------~~~~~~~~~~~~~~Pe~~~~-~~~~~~~D~~slG~~~~ 184 (250)
T cd05123 121 PENILLDADGHIKLTDFGLAKELSSEG---------------SRTNTFCGTPEYLAPEVLLG-KGYGKAVDWWSLGVLLY 184 (250)
T ss_pred cceEEEcCCCcEEEeecCcceecccCC---------------CcccCCcCCccccChHHhCC-CCCCchhhHHHHHHHHH
Confidence 999999999999999999998653211 01233468889999999887 45788999999999999
Q ss_pred Hhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH---HHHHhccCC
Q 001059 601 ELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA---TELLQDALP 663 (1170)
Q Consensus 601 ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta---~eiL~~~~~ 663 (1170)
+|++ ||..................+| ...+..+.++|++||..||.+||++ +++++|+||
T Consensus 185 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f 250 (250)
T cd05123 185 EMLTGKPPFYAEDRKEIYEKILKDPLRFP---EFLSPEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF 250 (250)
T ss_pred HHHHCCCCCCCCCHHHHHHHHhcCCCCCC---CCCCHHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence 9997 7765544333333333222222 2336789999999999999999999 999999997
|
Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the |
| >KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=322.20 Aligned_cols=255 Identities=22% Similarity=0.333 Sum_probs=207.0
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccC-Cc--EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLD-GR--HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~t-g~--~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
..-+-.++..+.++||+|.||.|++|.|... |+ .||||+++..... ....+|++|+.+|.+|+|||++++||....
T Consensus 104 kclIpee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~-~~mddflrEas~M~~L~H~hliRLyGvVl~ 182 (1039)
T KOG0199|consen 104 KCLIPEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLN-AIMDDFLREASHMLKLQHPHLIRLYGVVLD 182 (1039)
T ss_pred ceeccHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccc-hhHHHHHHHHHHHHhccCcceeEEeeeecc
Confidence 3333456677889999999999999999743 33 5999999754333 267899999999999999999999998632
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQI 502 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI 502 (1170)
..+.+|||+|+ |+|.+.|+. ...|.......|+.||
T Consensus 183 -----------------------------------------qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~Qi 221 (1039)
T KOG0199|consen 183 -----------------------------------------QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQI 221 (1039)
T ss_pred -----------------------------------------chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHH
Confidence 34579999997 799999987 3458888999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.||.||.++++|||||-.+|+|+-....|||||||+.+.+...+.. ........-...|+|||.+..
T Consensus 222 A~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~------------Yvm~p~rkvPfAWCaPEsLrh 289 (1039)
T KOG0199|consen 222 AKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDM------------YVMAPQRKVPFAWCAPESLRH 289 (1039)
T ss_pred HHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcc------------eEecCCCcCcccccCHhHhcc
Confidence 99999999999999999999999999999999999999987543211 111122234568999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||+|||++|||++ ||.+....+++..+- .+...+....++.++.++++.||..+|.+|||+..|.
T Consensus 290 -~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD--~~erLpRPk~csedIY~imk~cWah~paDRptFsair 366 (1039)
T KOG0199|consen 290 -RKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNID--AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIR 366 (1039)
T ss_pred -ccccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhcc--ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHH
Confidence 679999999999999999997 888777766655443 4444455566788999999999999999999999997
Q ss_pred hc
Q 001059 659 QD 660 (1170)
Q Consensus 659 ~~ 660 (1170)
..
T Consensus 367 ~~ 368 (1039)
T KOG0199|consen 367 ED 368 (1039)
T ss_pred Hh
Confidence 54
|
|
| >cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-31 Score=297.81 Aligned_cols=244 Identities=25% Similarity=0.349 Sum_probs=193.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. .+..+|+|.+.... .....+.+|+.+++.++|+||+++++.+.+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~-~~~~~~iK~~~~~~---~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-------- 72 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGS---MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-------- 72 (260)
T ss_pred ccceeEEeEecCccceEEEEEEec-CCccEEEEecCCCh---hHHHHHHHHHHHHHhcCCCCcceEEEEEcC--------
Confidence 578999999999999999999865 56679999876432 234678899999999999999999877621
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...|++|||++ ++|.+++... ..++...++.++.||+.||.|||
T Consensus 73 ---------------------------------~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH 119 (260)
T cd05073 73 ---------------------------------EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 119 (260)
T ss_pred ---------------------------------CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH
Confidence 34689999997 5999998753 35788899999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.|++||||||+||+++.++.+||+|||++..+..... .......++..|+|||++.+ ..++.++
T Consensus 120 ~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--------------~~~~~~~~~~~y~~PE~~~~-~~~~~~~ 184 (260)
T cd05073 120 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY--------------TAREGAKFPIKWTAPEAINF-GSFTIKS 184 (260)
T ss_pred hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc--------------ccccCCcccccccCHhHhcc-CCcCccc
Confidence 99999999999999999999999999999976432110 01122346678999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|+|||||++|+|++ ||........... +. .....+.....+.++.+++.+||+.+|.+||++.++++
T Consensus 185 Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~ 255 (260)
T cd05073 185 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRA-LE-RGYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 255 (260)
T ss_pred cchHHHHHHHHHHhcCCCCCCCCCHHHHHHH-Hh-CCCCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHH
Confidence 99999999999997 7765444333222 22 22222333456678999999999999999999999875
|
Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa |
| >cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-32 Score=299.66 Aligned_cols=239 Identities=24% Similarity=0.373 Sum_probs=190.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||++.. +++.||+|+++... ....+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~--~~~~~~iK~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-------- 70 (254)
T cd05083 5 LQKLTLGEIIGEGEFGAVLQGEY--TGQKVAVKNIKCDV----TAQAFLEETAVMTKLHHKNLVRLLGVILH-------- 70 (254)
T ss_pred HHHceeeeeeccCCCCceEeccc--CCCceEEEeecCcc----hHHHHHHHHHHHHhCCCCCcCeEEEEEcC--------
Confidence 36799999999999999999864 68899999986422 24578899999999999999999987622
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...|++|||++ ++|.+++.... .+++..++.++.|++.||.|||
T Consensus 71 ---------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH 117 (254)
T cd05083 71 ---------------------------------NGLYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE 117 (254)
T ss_pred ---------------------------------CCcEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23589999997 59999987543 4889999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|++||||||+||+++.++.+||+|||++...... ......+..|+|||.+.+ ..++.++
T Consensus 118 ~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~------------------~~~~~~~~~y~~pe~~~~-~~~~~~~ 178 (254)
T cd05083 118 SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG------------------VDNSKLPVKWTAPEALKH-KKFSSKS 178 (254)
T ss_pred hCCeeccccCcceEEEcCCCcEEECCCccceecccc------------------CCCCCCCceecCHHHhcc-CCcCchh
Confidence 999999999999999999999999999998753211 011234567999999876 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+... .+. .+..++.....++.+.+++.+||+.+|.+||++.+++..
T Consensus 179 Dv~slG~~l~el~~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 250 (254)
T cd05083 179 DVWSYGVLLWEVFSYGRAPYPKMSLKEVKE-CVE-KGYRMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREK 250 (254)
T ss_pred hHHHHHHHHHHHHhCCCCCCccCCHHHHHH-HHh-CCCCCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999985 665544433322 222 222222234566789999999999999999999999863
|
Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki |
| >cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-32 Score=301.42 Aligned_cols=242 Identities=21% Similarity=0.281 Sum_probs=188.0
Q ss_pred eeccCCcEEEEEEEEccCC------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDG------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.||+|+||.||+|+++..+ ..||||.+... ........+.+|+.+++.++||||++++++|..
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---------- 70 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKG-ATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLL---------- 70 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcc-cchhhHHHHHHHHHHHHhcCCCCeeeEeeeecC----------
Confidence 6899999999999987443 68999988643 222345678899999999999999999988732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------CCCCHHHHHHHHHHHHHHHH
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....|++|||++ ++|.+++... ..+++..+..++.||+.||+
T Consensus 71 ------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 120 (269)
T cd05044 71 ------------------------------NEPQYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCV 120 (269)
T ss_pred ------------------------------CCCeEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHH
Confidence 345799999997 5999888642 23788999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCC-----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|||+++++|+||||+|||++.++ .+||+|||+++........ .......++..|+|||++.+
T Consensus 121 ~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~ 187 (269)
T cd05044 121 YLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYY-------------RKEGEGLLPVRWMAPESLLD 187 (269)
T ss_pred HHHhCCcccCCCChheEEEecCCCCCCcceEECCccccccccccccc-------------ccCcccCCCccccCHHHHcc
Confidence 99999999999999999999877 8999999999865322110 01122356788999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||||||++|||++ ||......+..... . ....+......++.+.++|.+||..+|.+||++.+++
T Consensus 188 -~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~ 264 (269)
T cd05044 188 -GKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV-T-AGGRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQ 264 (269)
T ss_pred -CCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH-h-cCCccCCcccchHHHHHHHHHHcCCCcccCCCHHHHH
Confidence 568999999999999999985 66544443333222 2 1222233345567899999999999999999999997
Q ss_pred hc
Q 001059 659 QD 660 (1170)
Q Consensus 659 ~~ 660 (1170)
+.
T Consensus 265 ~~ 266 (269)
T cd05044 265 EI 266 (269)
T ss_pred HH
Confidence 63
|
Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male |
| >KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-32 Score=312.23 Aligned_cols=245 Identities=23% Similarity=0.314 Sum_probs=202.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
+.....+||.|.||.||.|.|+.-.-.||||.++- +....++|+.|..+|+.++|||+|+++|+|.
T Consensus 268 dItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKE---DtMeveEFLkEAAvMKeikHpNLVqLLGVCT----------- 333 (1157)
T KOG4278|consen 268 DITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKE---DTMEVEEFLKEAAVMKEIKHPNLVQLLGVCT----------- 333 (1157)
T ss_pred heeeeeccCCCcccceeeeeeeccceeeehhhhhh---cchhHHHHHHHHHHHHhhcCccHHHHhhhhc-----------
Confidence 55667899999999999999998889999998863 2234678999999999999999999999983
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+|||+|||. |+|.++|+++.+ ++.-..+.++.||.+||+||..+
T Consensus 334 -----------------------------~EpPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkk 384 (1157)
T KOG4278|consen 334 -----------------------------HEPPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKK 384 (1157)
T ss_pred -----------------------------cCCCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHh
Confidence 2456899999985 899999988764 66667788999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
++|||||-.+|+|+.++..|||+|||++++...+.+. .+-+..-..-|.|||-|.- ..++.|+||
T Consensus 385 nFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYT--------------AHAGAKFPIKWTAPEsLAy-NtFSiKSDV 449 (1157)
T KOG4278|consen 385 NFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYT--------------AHAGAKFPIKWTAPESLAY-NTFSIKSDV 449 (1157)
T ss_pred hhhhhhhhhhhccccccceEEeeccchhhhhcCCcee--------------cccCccCcccccCcccccc-cccccchhh
Confidence 9999999999999999999999999999987543321 1122234567999998876 678999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|+|||+|||+.| ||.+-.-.+. ..+.+++........+++....||+.||+.+|.+||++.+|-+.
T Consensus 450 WAFGVLLWEIATYGMsPYPGidlSqV--Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqa 519 (1157)
T KOG4278|consen 450 WAFGVLLWEIATYGMSPYPGIDLSQV--YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQA 519 (1157)
T ss_pred HHHHHHHHHHHhcCCCCCCCccHHHH--HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHH
Confidence 999999999986 7655443332 23344666666677889999999999999999999999998653
|
|
| >KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-32 Score=322.11 Aligned_cols=251 Identities=23% Similarity=0.352 Sum_probs=208.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+...+.++||.|.||+|++|+.+..|+ .||||.++.. .+.....+|+.|..+|-+++||||+++.|+..
T Consensus 628 ~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G-ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVT------ 700 (996)
T KOG0196|consen 628 PSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG-YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVT------ 700 (996)
T ss_pred hhheEEEEEEecccccceecccccCCCCcceeEEEeeeccC-ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEe------
Confidence 4566788999999999999999997775 6999999854 34455678999999999999999999998762
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+.||+|||. |+|..+|+.+ +.|+.-+..-+++.|+.||+|
T Consensus 701 ----------------------------------ks~PvMIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkY 746 (996)
T KOG0196|consen 701 ----------------------------------KSKPVMIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKY 746 (996)
T ss_pred ----------------------------------cCceeEEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHH
Confidence 2456789999996 7999999865 469999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
|-++|+|||||-.+|||++.+..+|++|||+++.+..+. ... ....+..-..+|.|||++.- .+++.
T Consensus 747 Lsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~---~~~---------ytt~GGKIPiRWTAPEAIa~-RKFTs 813 (996)
T KOG0196|consen 747 LSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP---EAA---------YTTLGGKIPIRWTAPEAIAY-RKFTS 813 (996)
T ss_pred HhhcCchhhhhhhhheeeccceEEEeccccceeecccCC---Ccc---------ccccCCccceeecChhHhhh-cccCc
Confidence 999999999999999999999999999999999874332 011 11122234578999999987 67999
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||+|||.++ ||+...+.+.... +.+..++|+ +.+++..+..||..||++|-..||.+.||+..
T Consensus 814 ASDVWSyGIVmWEVmSyGERPYWdmSNQdVIka-Ie~gyRLPp-PmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~ 887 (996)
T KOG0196|consen 814 ASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKA-IEQGYRLPP-PMDCPAALYQLMLDCWQKDRNRRPKFAQIVST 887 (996)
T ss_pred hhhccccceEEEEecccCCCcccccchHHHHHH-HHhccCCCC-CCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHH
Confidence 9999999999999996 9888777655544 444455554 45678899999999999999999999999875
|
|
| >KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.3e-33 Score=296.08 Aligned_cols=254 Identities=26% Similarity=0.397 Sum_probs=202.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
++++-+..||.|+||+|+|..++.+|+..|||.|+.... .....+++.|.....+- +.||||++||+++..
T Consensus 64 ~~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~-~keq~rll~e~d~~mks~~cp~IVkfyGa~F~E------- 135 (361)
T KOG1006|consen 64 DNLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI-EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSE------- 135 (361)
T ss_pred chHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc-hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcC-------
Confidence 455567889999999999999999999999999987654 34567888888876555 789999999998543
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH-----hcCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE-----SYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~-----~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...||.||+|+-||..+.. +...++|...-.+...++.||.|
T Consensus 136 ---------------------------------GdcWiCMELMd~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~y 182 (361)
T KOG1006|consen 136 ---------------------------------GDCWICMELMDISLDKLYKRVYSVQKSRIPENILGHITVATVDALDY 182 (361)
T ss_pred ---------------------------------CceeeeHHHHhhhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHH
Confidence 2359999999987765543 34569999999999999999999
Q ss_pred HHh-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC-C
Q 001059 509 IHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-I 586 (1170)
Q Consensus 509 LHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-~ 586 (1170)
|-. ..|||||+||+|||++..|.+||||||++-.+... +..+.-.|-..|||||.+..... |
T Consensus 183 LK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~S----------------iAkT~daGCrpYmAPERi~p~~~gy 246 (361)
T KOG1006|consen 183 LKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDS----------------IAKTVDAGCRPYMAPERIDPSDKGY 246 (361)
T ss_pred HHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHH----------------HHhhhccCCccccChhccCCccCCc
Confidence 986 47999999999999999999999999999876322 22344578889999999876544 9
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-----CccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-----~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
+-++|+|||||+|||+.| |+..++..-..+..+. .+..| ....+.+..+..+|..||.+|-+.||...+++
T Consensus 247 DiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv-~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk 325 (361)
T KOG1006|consen 247 DIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVV-IGDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLK 325 (361)
T ss_pred chhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHH-cCCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhh
Confidence 999999999999999998 7766665333333222 22222 22244677899999999999999999999999
Q ss_pred hccCCCCc
Q 001059 659 QDALPPQM 666 (1170)
Q Consensus 659 ~~~~~~~~ 666 (1170)
.++|..-.
T Consensus 326 ~~~fyr~y 333 (361)
T KOG1006|consen 326 KFPFYRMY 333 (361)
T ss_pred cCchhhhh
Confidence 99876544
|
|
| >cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10 | Back alignment and domain information |
|---|
Probab=99.98 E-value=1.7e-31 Score=298.28 Aligned_cols=247 Identities=30% Similarity=0.511 Sum_probs=194.1
Q ss_pred CceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCC--------CChhhHHHHHHHHHHHHh-ccCCCceeEEEEEee
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKD--------KSLPVNDRILREVATLSR-LQHQHVVRYYQAWFE 425 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~--------~~~~~~~~~~~Ev~iL~~-l~HpnIV~l~~~~~e 425 (1170)
+|++.+.||+|+||.||+|.++. +++.+|+|.+.... .......++.+|+.++++ ++||||+++++.+.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47888999999999999999987 68899999986432 122234567789988875 799999999988732
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFR 500 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~ 500 (1170)
....|++|||+++ +|.+++.. ...+++..++.++.
T Consensus 81 ----------------------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~ 120 (269)
T cd08528 81 ----------------------------------------NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFV 120 (269)
T ss_pred ----------------------------------------CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHH
Confidence 3568999999974 88877642 34689999999999
Q ss_pred HHHHHHHHHHh-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 501 QIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 501 qI~~gL~yLHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
|++.||.|||+ .+++|+||||+|||++.++.+||+|||++....... ......|+..|+|||.
T Consensus 121 ~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~~~~Pe~ 184 (269)
T cd08528 121 QMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPES----------------KLTSVVGTILYSCPEI 184 (269)
T ss_pred HHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeeccccc----------------ccccccCcccCcChhh
Confidence 99999999996 789999999999999999999999999997643211 1234568999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+.+ ..++.++||||||+++|+|++ ||.............. ....|......++++.++|.+||+.||++||++.+
T Consensus 185 ~~~-~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e 262 (269)
T cd08528 185 VKN-EPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVE-AVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQ 262 (269)
T ss_pred hcC-CCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhh-ccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHH
Confidence 987 568999999999999999997 7655443333222222 21122222245679999999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+..+
T Consensus 263 ~~~~ 266 (269)
T cd08528 263 VSAM 266 (269)
T ss_pred HHHH
Confidence 9764
|
Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. |
| >KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.6e-32 Score=323.67 Aligned_cols=260 Identities=22% Similarity=0.384 Sum_probs=213.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+-|++.++||.|.+|+||+++++.+|+..|+|+...... ..+++.-|.++|+.. +|||++.+|++|.-..
T Consensus 19 d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d---~deEiE~eynil~~~~~hpnv~~fyg~~~k~~------ 89 (953)
T KOG0587|consen 19 DIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED---EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD------ 89 (953)
T ss_pred CccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc---ccHHHHHHHHHHHhccCCCCcceEEEEEEEec------
Confidence 568999999999999999999999999999999875332 345677788999888 7999999999985421
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+.+|+|||||+ ||.-+++.. ..++.|+.+..|++.++.|+.|||
T Consensus 90 -----------------------------~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH 140 (953)
T KOG0587|consen 90 -----------------------------PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH 140 (953)
T ss_pred -----------------------------CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh
Confidence 124678999999997 577777753 456999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC----CC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----KI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~----~~ 586 (1170)
.+.++|||||-.|||++.++.|||+|||.+..+... .....+.+|||.|||||++.... .|
T Consensus 141 ~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT---------------~grRnT~iGtP~WMAPEViac~e~~d~ty 205 (953)
T KOG0587|consen 141 NNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDST---------------VGRRNTFIGTPYWMAPEVIACDESPDATY 205 (953)
T ss_pred hcceeeecccCceEEEeccCcEEEeeeeeeeeeecc---------------cccccCcCCCcccccceeeecccCCCCCc
Confidence 999999999999999999999999999999876422 12345679999999999987543 37
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+..+|+|||||+..||.- |+.+.+++..+..+.+..+.-...+...+.++.+||..||.+|-.+||+..++|+|||.
T Consensus 206 d~R~D~WsLGITaIEladG~PPl~DmHPmraLF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi 285 (953)
T KOG0587|consen 206 DYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFI 285 (953)
T ss_pred ccccchhhccceeehhcCCCCCccCcchhhhhccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcc
Confidence 889999999999999984 77777777766655443222222344556689999999999999999999999999998
Q ss_pred CCch
Q 001059 664 PQME 667 (1170)
Q Consensus 664 ~~~~ 667 (1170)
+...
T Consensus 286 ~e~~ 289 (953)
T KOG0587|consen 286 TEQP 289 (953)
T ss_pred cccc
Confidence 7543
|
|
| >KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=3e-32 Score=303.90 Aligned_cols=265 Identities=25% Similarity=0.378 Sum_probs=199.6
Q ss_pred CCCCCCCCCCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh--ccCCCce
Q 001059 340 DSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVV 417 (1170)
Q Consensus 340 ~~~~~~~~~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--l~HpnIV 417 (1170)
++++..+.+.+.....+..+++.||+|.||+||+|+|+ |+.||||++...+ .....||.++... |+|+||+
T Consensus 196 GSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr--Ge~VAVKiF~srd-----E~SWfrEtEIYqTvmLRHENIL 268 (513)
T KOG2052|consen 196 GSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR--GEDVAVKIFSSRD-----ERSWFRETEIYQTVMLRHENIL 268 (513)
T ss_pred CCCCCchhHhHHhhhheeEEEEEecCccccceeecccc--CCceEEEEecccc-----hhhhhhHHHHHHHHHhccchhh
Confidence 34444445556666788999999999999999999998 9999999997543 3456677777665 4999999
Q ss_pred eEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHH
Q 001059 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAW 496 (1170)
Q Consensus 418 ~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~ 496 (1170)
.++++= +++.| .-..+|+|++|.+ |||.++|.+ ..++.....
T Consensus 269 gFIaaD------------~~~~g------------------------s~TQLwLvTdYHe~GSL~DyL~r-~tv~~~~ml 311 (513)
T KOG2052|consen 269 GFIAAD------------NKDNG------------------------SWTQLWLVTDYHEHGSLYDYLNR-NTVTTEGML 311 (513)
T ss_pred hhhhcc------------ccCCC------------------------ceEEEEEeeecccCCcHHHHHhh-ccCCHHHHH
Confidence 988552 22222 2468999999997 899999988 679999999
Q ss_pred HHHHHHHHHHHHHHhC--------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 497 HLFRQIVEGLAHIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 497 ~i~~qI~~gL~yLHs~--------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
+++..++.||+|||-. .|.|||||+.|||+..++.+.|+|+|+|-..... ........+..
T Consensus 312 ~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~-----------t~~idi~~N~r 380 (513)
T KOG2052|consen 312 KLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSD-----------TDTIDIPPNPR 380 (513)
T ss_pred HHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEeccc-----------CCcccCCCCCc
Confidence 9999999999999952 4999999999999999999999999999865322 12233445678
Q ss_pred ccCccCCCcccccCCCC-----CCccchhHHHHHHHHHhhc-------------CCCchhH-------HHHHHHHhhhcC
Q 001059 569 VGTYFYTAPEIEQGWPK-----IDEKADMYSLGIVFFELWH-------------PFSTAME-------RQIVLSDLKQKG 623 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~-----~~~ksDIwSlGviL~ELlt-------------Pf~~~~~-------~~~~~~~l~~~~ 623 (1170)
+||-+|||||+|...-+ --..+||||||.++||++. ||.+.-+ +..+.-..+..+
T Consensus 381 VGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv~~~RP 460 (513)
T KOG2052|consen 381 VGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCVQKLRP 460 (513)
T ss_pred cceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceeecccCC
Confidence 99999999999875211 1246899999999999961 7764322 111122222344
Q ss_pred CCCCccccCC--HHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 624 ELPPSWVAKF--SEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 624 ~~p~~~~~~~--~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.+|..|...+ ..+.++|+.||..||.-|.|+-.|-+
T Consensus 461 ~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKK 498 (513)
T KOG2052|consen 461 NIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKK 498 (513)
T ss_pred CCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHH
Confidence 4555555432 25678999999999999999877654
|
|
| >KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.98 E-value=4.2e-32 Score=309.15 Aligned_cols=249 Identities=24% Similarity=0.332 Sum_probs=198.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.+.+.++||+|-||+|.+|.-. .+..||||+++.... ......|.+|+++|.+|+|||||+++++|..
T Consensus 539 ~L~~~ekiGeGqFGEVhLCeve-g~lkVAVK~Lr~~a~-~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~---------- 606 (807)
T KOG1094|consen 539 RLRFKEKIGEGQFGEVHLCEVE-GPLKVAVKILRPDAT-KNARNDFLKEIKILSRLKHPNIVELLGVCVQ---------- 606 (807)
T ss_pred heehhhhhcCcccceeEEEEec-CceEEEEeecCcccc-hhHHHHHHHHHHHHhccCCCCeeEEEeeeec----------
Confidence 4567889999999999999876 368999999975433 3345789999999999999999999999953
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++++|||+. |+|.+++.... ........+++.||++||+||.+.
T Consensus 607 ------------------------------DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~ 656 (807)
T KOG1094|consen 607 ------------------------------DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL 656 (807)
T ss_pred ------------------------------CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh
Confidence 355789999996 89999998763 345566778999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
++|||||.+.|||++.++++||+|||+++.+......+ .....+-..+|||||.+.- ++++.++|+
T Consensus 657 nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~-------------vqgr~vlpiRwmawEsill-gkFttaSDv 722 (807)
T KOG1094|consen 657 NFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYR-------------VQGRAVLPIRWMAWESILL-GKFTTASDV 722 (807)
T ss_pred chhhccccccceeecCcccEEecCcccccccccCCcee-------------eecceeeeeeehhHHHHHh-ccccchhhh
Confidence 99999999999999999999999999999654332111 1122356689999998775 579999999
Q ss_pred HHHHHHHHHhhc-----CCCchhHHHHHHHHhh---hcC--CCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH-----PFSTAMERQIVLSDLK---QKG--ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt-----Pf~~~~~~~~~~~~l~---~~~--~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|+||+++||+++ ||....+++.....-. ..+ ..++.+.-++..+.++|.+||..|-.+||+++++-.+
T Consensus 723 WafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~ 800 (807)
T KOG1094|consen 723 WAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLF 800 (807)
T ss_pred hhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHH
Confidence 999999999984 9988777666543211 111 1223334456688999999999999999999998654
|
|
| >cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-31 Score=295.15 Aligned_cols=228 Identities=21% Similarity=0.300 Sum_probs=178.8
Q ss_pred CCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCccccc
Q 001059 366 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 445 (1170)
Q Consensus 366 G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~ 445 (1170)
|.||.||+|+++.+|+.||+|.++... .+.+|...+....||||+++++++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-------~~~~~~~~~~~~~~~~i~~~~~~~~--------------------- 55 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-------EYSRERLTIIPHCVPNMVCLHKYIV--------------------- 55 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-------hhhhHHHHHHhcCCCceeehhhhee---------------------
Confidence 899999999999999999999986432 2334555556668999999997763
Q ss_pred ccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCce
Q 001059 446 TFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 524 (1170)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NI 524 (1170)
.....|++|||++ ++|.+++.+...+++..+..++.|++.||+|||++||+||||||+||
T Consensus 56 -------------------~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Ni 116 (237)
T cd05576 56 -------------------SEDSVFLVLQHAEGGKLWSHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNI 116 (237)
T ss_pred -------------------cCCeEEEEEecCCCCCHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHE
Confidence 2357899999997 59999988877899999999999999999999999999999999999
Q ss_pred eecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc
Q 001059 525 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH 604 (1170)
Q Consensus 525 Li~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt 604 (1170)
+++.++.++|+|||.+...... .....++..|+|||++.+ ..++.++|+||+||++|||++
T Consensus 117 l~~~~~~~~l~df~~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~DvwslG~il~el~~ 177 (237)
T cd05576 117 LLDDRGHIQLTYFSRWSEVEDS------------------CDGEAVENMYCAPEVGGI-SEETEACDWWSLGAILFELLT 177 (237)
T ss_pred EEcCCCCEEEecccchhccccc------------------cccCCcCccccCCcccCC-CCCCchhhHHHHHHHHHHHHH
Confidence 9999999999999988654211 122356778999999876 567899999999999999997
Q ss_pred CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhccCC
Q 001059 605 PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQDALP 663 (1170)
Q Consensus 605 Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~~~~ 663 (1170)
.............. .....+| ...++.++++|.+||+.||++||++ +++++||||
T Consensus 178 g~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~ 237 (237)
T cd05576 178 GKTLVECHPSGINT-HTTLNIP---EWVSEEARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF 237 (237)
T ss_pred CcchhhcCchhccc-ccccCCc---ccCCHHHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence 33211100000000 0011122 2356789999999999999999986 999999996
|
Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha |
| >KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-32 Score=302.14 Aligned_cols=255 Identities=25% Similarity=0.346 Sum_probs=196.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC--CC----ceeEEEEEe
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QH----VVRYYQAWF 424 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H--pn----IV~l~~~~~ 424 (1170)
....++|.++..+|+|.||.|..|.+..++..||||+++.. ....+...-|+.+|.++.+ |+ +|++.++|
T Consensus 85 D~l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V---~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF- 160 (415)
T KOG0671|consen 85 DILTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV---DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF- 160 (415)
T ss_pred cccccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH---HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh-
Confidence 34478899999999999999999999999999999999742 2344556779999999943 22 44444333
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI 502 (1170)
....+.+||+|.++-|+.+.+..+ .+++..+++.+++|+
T Consensus 161 ---------------------------------------dyrghiCivfellG~S~~dFlk~N~y~~fpi~~ir~m~~QL 201 (415)
T KOG0671|consen 161 ---------------------------------------DYRGHICIVFELLGLSTFDFLKENNYIPFPIDHIRHMGYQL 201 (415)
T ss_pred ---------------------------------------hccCceEEEEeccChhHHHHhccCCccccchHHHHHHHHHH
Confidence 235678999999999999999764 469999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecC--------------------CCCEEEeecCcchhccccccccCCCCCCCCCCcc
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDA--------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 562 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~--------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~ 562 (1170)
+++++|||+++++|-||||+|||+.+ +..|||+|||.|++...
T Consensus 202 ~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I~vIDFGsAtf~~e----------------- 264 (415)
T KOG0671|consen 202 LESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAIKVIDFGSATFDHE----------------- 264 (415)
T ss_pred HHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcceEEEecCCcceecc-----------------
Confidence 99999999999999999999999832 23589999999987432
Q ss_pred ccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhcCC---CchhHHHHHHHHhhhcCCCCCcccc--------
Q 001059 563 VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPF---STAMERQIVLSDLKQKGELPPSWVA-------- 631 (1170)
Q Consensus 563 ~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltPf---~~~~~~~~~~~~l~~~~~~p~~~~~-------- 631 (1170)
.+++.+.|..|.|||++.+. .++..|||||+||||+|+++++ ....+.+.+....+..+++|.....
T Consensus 265 -~hs~iVsTRHYRAPEViLgL-GwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~P~~mi~r~~~~Kyf 342 (415)
T KOG0671|consen 265 -HHSTIVSTRHYRAPEVILGL-GWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPIPSRMIKKTRKEKYF 342 (415)
T ss_pred -CcceeeeccccCCchheecc-CcCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCCcHHHhhhhhhHhhh
Confidence 13566899999999999994 5899999999999999999744 3333333222111112232221100
Q ss_pred --------------------------------CC---HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 632 --------------------------------KF---SEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 632 --------------------------------~~---~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.. -++.+||++||..||.+|+|+.|+|+||||....
T Consensus 343 ~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~EAL~HpFF~~~~ 413 (415)
T KOG0671|consen 343 RRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLREALSHPFFARLT 413 (415)
T ss_pred hcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHHHHhcCHHhhcCC
Confidence 00 1356999999999999999999999999998753
|
|
| >PRK09194 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-30 Score=316.85 Aligned_cols=436 Identities=13% Similarity=0.108 Sum_probs=268.5
Q ss_pred cccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccCCceee
Q 001059 705 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLE 778 (1170)
Q Consensus 705 ~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~la 778 (1170)
.++.+ .+.++|+++|+|.+++++++|++.+++.++++||++|.||.| ++.. +.+...++||+|.|++|+.++
T Consensus 28 ~ag~i--~~~~~G~~~~lP~g~~~~~~i~~~i~~~~~~~G~~ei~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~l~ 105 (565)
T PRK09194 28 RAGYI--RKLASGIYTYLPLGLRVLRKIENIVREEMNKIGAQEVLMPALQPAELWQESGRWEEYGPELLRLKDRHGRDFV 105 (565)
T ss_pred hCCCc--cccCCCeeEECccHHHHHHHHHHHHHHHHHHcCCEEEECcccCcHHHHhhcCCccccchhceEEecCCCCEEE
Confidence 34444 356899999999999999999999999999999999999999 3322 356678899999999999999
Q ss_pred ecCCCCHHHHHHHHh----CCCCceeEEEecCeEEcC-CCCCC---CCceeEeEEEEeCCCCcccHH---HHHHHHHHHH
Q 001059 779 LSHELRLPFIRWAIS----NQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDIV 847 (1170)
Q Consensus 779 LRPD~T~~iaR~~~~----~~~~P~r~~Y~g~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l 847 (1170)
|||+.+.+++.++.. ++..|+|+||+|++||+| +|+.| .|||+|.|+++||.++..+|+ +++.++.+++
T Consensus 106 LrPt~e~~~~~~~~~~~~s~~~LP~r~yqi~~~fR~E~rp~~Gl~R~reF~q~d~~~f~~~~~~a~~~~~~~~~~~~~i~ 185 (565)
T PRK09194 106 LGPTHEEVITDLVRNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHADEESLDETYDAMYQAYSRIF 185 (565)
T ss_pred ECCCChHHHHHHHHhhhhhcccCCeEEEEeeCCccCCCCCCCcccccccEEEeeEEEEcCChHHHHHHHHHHHHHHHHHH
Confidence 999766655544443 446799999999999999 88864 567999999999998888898 6677789999
Q ss_pred HHcCCCcceEEEeCcHHHHHHHHH------------------HhCCCHHHHHHHHHHH------HHhcCCCCCcccccch
Q 001059 848 TRFFHAESCDIHLNHGDLLEAIWS------------------WAGIKAEHREKVAELL------AMMGSLRPQSSEWKSK 903 (1170)
Q Consensus 848 ~~lgi~~~~~i~lg~~~il~~~l~------------------~lgl~~~~~~~l~~~l------~~~d~~~~~~~~~~~~ 903 (1170)
+.||++ |.+.+++++.+.+... .|+...+...+....- ..+..+.. .....
T Consensus 186 ~~lgl~--~~~~~~~~g~~gg~~s~e~~~~~~~g~~~~~~c~~c~~~~n~e~a~~~~~~~~~~~~~~~~v~~---p~~~t 260 (565)
T PRK09194 186 DRLGLD--FRAVEADSGAIGGSASHEFMVLADSGEDTIVYSDESDYAANIEKAEALPPPRAAAEEALEKVDT---PNAKT 260 (565)
T ss_pred HHhCCc--cEEEEcccccCCCceeEEEEEecCCCceEEEEeCCCCcchhhhhhcccCCCCccccccceeecC---CCCCc
Confidence 999994 9998887555433221 1111100000000000 00000000 00000
Q ss_pred HHHHHHHH-------HHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCC---hhHHHHHHHH------HHHHccC
Q 001059 904 WVVIRRQL-------LQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD---KPTRKALDEL------YLRIWRI 967 (1170)
Q Consensus 904 ~~~~~~~~-------~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~---~~~~~~l~~L------~l~~~g~ 967 (1170)
..++...+ ++..=+.... .. ++..+.|+..--+.++++.+... ....+.+.++ .+.-+|.
T Consensus 261 ~~e~a~~lg~~~~~~~KtLi~~~~~-~~---~lvvvp~d~~vn~~kl~~~lg~~~l~~a~~eel~~~~g~~~G~v~P~Gl 336 (565)
T PRK09194 261 IEELAEFLNVPAEKTVKTLLVKADG-EL---VAVLVRGDHELNEVKLENLLGAAPLELATEEEIRAALGAVPGFLGPVGL 336 (565)
T ss_pred HHHHHHHhCCCHHHeeEEEEEEeCC-eE---EEEEeecchhhhHHHHHhhcCCcccccCCHHHHHHhhCCCCCccCcccC
Confidence 00000000 0000000000 00 00011122222222222221100 0001111111 1122222
Q ss_pred c--ceEEEccCCCCCCCcccce-----EE-EE----------E----e--ccCCCccc---ccccce------ecccccc
Q 001059 968 E--KNIYIDALMPPIESYHRNL-----FF-QV----------F----S--VKEKYPAT---LVEGTL------LAVGGRY 1014 (1170)
Q Consensus 968 ~--~~i~~Dl~lvrgldYYtG~-----VF-e~----------~----~--~~~~~~~~---~~~~~~------I~~GGRY 1014 (1170)
. -.+.+|.++...-++|+|- -| .+ + . .+...|.- +....+ .-=|=+|
T Consensus 337 ~~~v~viiD~sl~~~~~~~~gan~~g~h~~~~~~~~d~~~~~~~d~~~~~~g~~c~~c~~~l~~~~~iEvGh~f~lG~~y 416 (565)
T PRK09194 337 PKDVPIIADRSVADMSNFVVGANEDDYHYVGVNWGRDFPVPEVADLRNVVEGDPSPDGGGTLKIARGIEVGHIFQLGTKY 416 (565)
T ss_pred CCCceEEEeccccccccccccCCCCCceeeCCccCcCCCcccccchhhhhcCCCCCCCCceeEEeeeEEEEEEecCCcch
Confidence 1 2577788777666666541 11 00 0 0 00000100 000011 1134455
Q ss_pred chhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCccHHHHHHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLLVERMELVA 1086 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~~~a~~ia~ 1086 (1170)
-. .|+-. +...-|+..++.-..|+||++||+.++.+ +...+...+|.+|+|++.+ ++.....|.++++
T Consensus 417 s~---~~~~~-~~~~~g~~~~~~m~~~gIGv~Rli~al~e~~~d~~gl~~P~~iaP~~v~Iv~~~~~~~~~~~~a~~i~~ 492 (565)
T PRK09194 417 SE---AMNAT-VLDENGKAQPLIMGCYGIGVSRLVAAAIEQNHDEKGIIWPKAIAPFDVHIVPVNMKDEEVKELAEKLYA 492 (565)
T ss_pred hh---ccCCE-EECCCCCEEeEEEeeEechHHHHHHHHHHhhccccCccCCCccCCceEEEEECCCCcHHHHHHHHHHHH
Confidence 42 23321 11223333323334678999999888752 3344455789999999984 2346788999999
Q ss_pred HHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 001059 1087 ELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1156 (1170)
Q Consensus 1087 ~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~ 1156 (1170)
.||+.|++|.+++. +.++++++++|+..|||++|+||++|+++|+|+|+++.+|+|..|+++++++.+.
T Consensus 493 ~L~~~gi~v~~Ddr-~~~~g~k~~~ad~~GiP~~iiiG~~e~~~~~v~v~~r~~ge~~~v~~~~l~~~i~ 561 (565)
T PRK09194 493 ELQAAGIEVLLDDR-KERPGVKFADADLIGIPHRIVVGDRGLAEGIVEYKDRRTGEKEEVPVDELVEFLK 561 (565)
T ss_pred HHhccCCeEEEECC-CCCHHHHHHHHHhcCCCEEEEEcCccccCCeEEEEECCCCceEEEeHHHHHHHHH
Confidence 99999999998876 6799999999999999999999999999999999999999999999999988875
|
|
| >PLN03225 Serine/threonine-protein kinase SNT7; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-31 Score=327.90 Aligned_cols=261 Identities=22% Similarity=0.279 Sum_probs=175.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccC----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLD----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~t----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||.||+|++..+ +..||||++..... .+...+| .++...+.++..++..+...
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~----~e~~~~e--~l~~~~~~~~~~~~~~~~~~-- 201 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA----VEIWMNE--RVRRACPNSCADFVYGFLEP-- 201 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch----hHHHHHH--HHHhhchhhHHHHHHhhhcc--
Confidence 468999999999999999999999988 89999998753221 1111111 22233344444433222110
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH------------------ 489 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~------------------ 489 (1170)
........++++|||++ ++|.+++.....
T Consensus 202 --------------------------------~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~ 249 (566)
T PLN03225 202 --------------------------------VSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKG 249 (566)
T ss_pred --------------------------------cccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhcccc
Confidence 00123467899999997 589888764321
Q ss_pred --CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCc
Q 001059 490 --FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 566 (1170)
Q Consensus 490 --l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~ 566 (1170)
.....+..++.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+.... .....
T Consensus 250 ~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NILl~~~~~~~KL~DFGlA~~l~~~~--------------~~~~~ 315 (566)
T PLN03225 250 LERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNIIFSEGSGSFKIIDLGAAADLRVGI--------------NYIPK 315 (566)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEEEeCCCCcEEEEeCCCcccccccc--------------ccCCc
Confidence 123456789999999999999999999999999999986 5799999999998643211 11124
Q ss_pred ccccCccCCCcccccCCC---------------------CCCccchhHHHHHHHHHhhcCCCchhHH-HHHHHHhhhcCC
Q 001059 567 GQVGTYFYTAPEIEQGWP---------------------KIDEKADMYSLGIVFFELWHPFSTAMER-QIVLSDLKQKGE 624 (1170)
Q Consensus 567 ~~~GT~~Y~APE~l~~~~---------------------~~~~ksDIwSlGviL~ELltPf~~~~~~-~~~~~~l~~~~~ 624 (1170)
..+||+.|||||++.... .++.++|||||||+||||++|....... ......+.....
T Consensus 316 ~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~ 395 (566)
T PLN03225 316 EFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDY 395 (566)
T ss_pred ccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCC
Confidence 468999999999764311 2445679999999999999854332222 111111111110
Q ss_pred ------------CCCc-------cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 625 ------------LPPS-------WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 625 ------------~p~~-------~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
..+. .........+||++||+.||.+|||+.++|+||||....
T Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~ta~e~L~Hpff~~~~ 457 (566)
T PLN03225 396 DLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRISAKAALAHPYFDREG 457 (566)
T ss_pred cHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCCHHHHhCCcCcCCCC
Confidence 0000 000112345899999999999999999999999998764
|
|
| >KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-32 Score=314.50 Aligned_cols=272 Identities=25% Similarity=0.429 Sum_probs=221.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|+++..+|.|.||.|||++++.+++..|+|+++..... +..-+.+|+-+++.++|||||.|++.+.
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d--d~~~iqqei~~~~dc~h~nivay~gsyl--------- 82 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD--DFSGIQQEIGMLRDCRHPNIVAYFGSYL--------- 82 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc--cccccccceeeeecCCCcChHHHHhhhh---------
Confidence 37999999999999999999999999999999999876443 3455778999999999999999998763
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....+||.||||+ |+|.+..+-.+++++-++..+++..++|++|||++
T Consensus 83 -------------------------------r~dklwicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~ 131 (829)
T KOG0576|consen 83 -------------------------------RRDKLWICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQ 131 (829)
T ss_pred -------------------------------hhcCcEEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcC
Confidence 3467899999997 59999998889999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc--cCCCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE--QGWPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l--~~~~~~~~ks 590 (1170)
|=+|||||-.|||+++.|.+|++|||.+..+.. .-....++.|||.|||||+- .....|+..|
T Consensus 132 gk~hRdiKGanilltd~gDvklaDfgvsaqita---------------ti~KrksfiGtpywmapEvaaverkggynqlc 196 (829)
T KOG0576|consen 132 GKIHRDIKGANILLTDEGDVKLADFGVSAQITA---------------TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLC 196 (829)
T ss_pred CcccccccccceeecccCceeecccCchhhhhh---------------hhhhhhcccCCccccchhHHHHHhcccccccc
Confidence 999999999999999999999999999986531 12235778999999999973 3335699999
Q ss_pred hhHHHHHHHHHhh--c-CCCchhHHHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 591 DMYSLGIVFFELW--H-PFSTAMERQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 591 DIwSlGviL~ELl--t-Pf~~~~~~~~~~~~l~~~~~~p~--~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
|||++|+...|+- + |....+++....-.-+.....|. .....++.+-+|++.+|.++|++||+++.+|+|+|..+
T Consensus 197 diwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~ 276 (829)
T KOG0576|consen 197 DIWALGITAIELGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQ 276 (829)
T ss_pred cccccccchhhhhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeecc
Confidence 9999999999985 3 66666776665544443333322 22344567889999999999999999999999998776
Q ss_pred ch-HHHHHHHHHhcCCCC
Q 001059 666 ME-YELLDNILRMMHSSE 682 (1170)
Q Consensus 666 ~~-~~~~~~~~~~~~~~~ 682 (1170)
.. ....-.+++...+++
T Consensus 277 ~l~~rl~~eLLdK~n~P~ 294 (829)
T KOG0576|consen 277 TLSRRLAIELLDKVNNPN 294 (829)
T ss_pred chhhHHHHHHHHHccCCC
Confidence 63 233334455555554
|
|
| >KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.1e-32 Score=296.79 Aligned_cols=263 Identities=29% Similarity=0.447 Sum_probs=206.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-----hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-----~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++|-++..||+|||++||+|.+....+.||||+-..+..- ........||..+.+.|.||-||++|++|-
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfs----- 537 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFS----- 537 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeee-----
Confidence 4577788999999999999999988999999986554321 112345779999999999999999999872
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.+...+|-|+|||+| +|.-+|.....+++.+++.|+.||+.||.|
T Consensus 538 ----------------------------------lDtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~Y 583 (775)
T KOG1151|consen 538 ----------------------------------LDTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKY 583 (775)
T ss_pred ----------------------------------eccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 234567899999987 899999998999999999999999999999
Q ss_pred HHhC--CccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-
Q 001059 509 IHGQ--GIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG- 582 (1170)
Q Consensus 509 LHs~--gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~- 582 (1170)
|... .|||.||||.|||+-+ -|.+||+|||+++........... +.. -.+-..||.||++||.+--
T Consensus 584 LNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vd-------Gme-LTSQgAGTYWYLPPEcFvVg 655 (775)
T KOG1151|consen 584 LNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVD-------GME-LTSQGAGTYWYLPPECFVVG 655 (775)
T ss_pred HhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCccc-------cee-eecccCceeeecCcceeecC
Confidence 9976 5999999999999954 478999999999987654322110 000 1233579999999997642
Q ss_pred --CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHH---hhh-cCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 583 --WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSD---LKQ-KGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 583 --~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~---l~~-~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
.+..+.|+||||+|||+|.++. ||......+..+.. +.. ...+|+. +.+++++++||++||+..-++|..
T Consensus 656 kePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlkAtEVqFP~K-PvVsseAkaFIRRCLaYRKeDR~D 734 (775)
T KOG1151|consen 656 KEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILKATEVQFPPK-PVVSSEAKAFIRRCLAYRKEDRID 734 (775)
T ss_pred CCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhcceeccCCCC-CccCHHHHHHHHHHHHhhhhhhhh
Confidence 3568899999999999999996 88866544433221 111 2334443 456789999999999999999999
Q ss_pred HHHHHhccCCCC
Q 001059 654 ATELLQDALPPQ 665 (1170)
Q Consensus 654 a~eiL~~~~~~~ 665 (1170)
..++-.||++..
T Consensus 735 V~qLA~dpyllP 746 (775)
T KOG1151|consen 735 VQQLACDPYLLP 746 (775)
T ss_pred HHHHccCccccc
Confidence 999999986643
|
|
| >PLN02908 threonyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-30 Score=319.60 Aligned_cols=354 Identities=14% Similarity=0.116 Sum_probs=258.1
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
+.+.|+.+|+|.++.+++.|.+.+++.+.++||++|.||.+ ++ .++.+...++||.| |.+++.++|||+.|++
T Consensus 308 ~~~~G~~~~lP~g~~i~~~l~~~~~~~~~~~G~~ev~tP~l~~~~l~~~sGh~~~~~~~mf~~-~~~~~~~~Lrp~~~~~ 386 (686)
T PLN02908 308 ELSPGSCFFLPHGARIYNKLMDFIREQYWERGYDEVITPNIYNMDLWETSGHAAHYKENMFVF-EIEKQEFGLKPMNCPG 386 (686)
T ss_pred CCCCcceEEechHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhccEE-ecCCeeEEEcCCCcHH
Confidence 44579999999999999999999999999999999999999 22 33455688999998 6678999999999999
Q ss_pred HHHHHHhCC----CCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCC-CcccHH-HHHHHHHHHHHHcCCCcc
Q 001059 787 FIRWAISNQ----KSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGA-SALTEA-EVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 787 iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~-~~~aDa-Evi~la~~~l~~lgi~~~ 855 (1170)
++++++.+. ..|+|+|++|++||+|.+. .|.|||+|+++++||.+ ...+|+ |++.++.++++.||+.
T Consensus 387 ~~~~~~~~~~s~r~LPlr~~~~g~~fR~E~~~~l~Gl~RvReF~q~d~~if~~~~q~~~e~~~~l~~~~~v~~~lG~~-- 464 (686)
T PLN02908 387 HCLMFAHRVRSYRELPLRLADFGVLHRNELSGALTGLTRVRRFQQDDAHIFCREDQIKDEVKGVLDFLDYVYEVFGFT-- 464 (686)
T ss_pred HHHHHhccccChhhCCHhHEEeeccccCCCCcCCcCccccccEEEeeEEEEcCHHHHHHHHHHHHHHHHHHHHHCCCc--
Confidence 999888632 4699999999999998763 25667999999999995 457888 9999999999999994
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.|+++. +.++..++..+.....+..++++.++. +. + .... .+ +.|+
T Consensus 465 ~~~~ls~r~--~~~~g~~~~w~~ae~~l~~~ld~~~~~------~~---------~---~~g~-------~a----fygp 513 (686)
T PLN02908 465 YELKLSTRP--EKYLGDLETWDKAEAALTEALNAFGKP------WQ---------L---NEGD-------GA----FYGP 513 (686)
T ss_pred EEEEEeCCc--cccCCCHHHHHHHHHHHHHHHHHcCCC------cE---------E---CCCc-------ee----eccc
Confidence 999999985 555544333333334455666654421 00 0 0000 00 1122
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCC--CCCcccceEEEEEeccCCCcccccccceeccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP--IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGR 1013 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr--gldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGR 1013 (1170)
.. +..+..++.++ .. ...+.+|+.+.. +++||| |....
T Consensus 514 ki------------d~~~~d~l~r~----~~-~~t~q~df~lp~~f~L~Y~~----e~~~~------------------- 553 (686)
T PLN02908 514 KI------------DITVSDALKRK----FQ-CATVQLDFQLPIRFKLSYSA----EDEAK------------------- 553 (686)
T ss_pred ce------------EEEEEeccCCE----ee-ccceeecccCHhhcCCEEEC----CCCCc-------------------
Confidence 10 00111122221 00 123455555433 577877 11000
Q ss_pred cchhhhhcccccccccCCCCCCCCceEEec--cHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHH
Q 001059 1014 YDYLLHRMWDREYVGYASRTNPPSGVGASL--ALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1089 (1170)
Q Consensus 1014 YD~L~~~fg~~~~~~~~g~~~~~pAvGfai--glerL~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR 1089 (1170)
..++ ..+.-|+ ++||++.+|.++ ...+.-.+|.+|+|++.+ +....+|+++++.||
T Consensus 554 ------------------~~~p-v~ihrai~GsiERli~iL~e~~~g~~p~wlsp~qv~Vipv~-~~~~~~A~~va~~LR 613 (686)
T PLN02908 554 ------------------IERP-VMIHRAILGSVERMFAILLEHYAGKWPFWLSPRQAIVVPIS-EKSQDYAEEVRAQLH 613 (686)
T ss_pred ------------------CCCC-EEEEeCceEhHHHHHHHHHHHcCCCCCCCCCCceEEEEEEC-HHHHHHHHHHHHHHH
Confidence 0000 1111112 799999988532 222222357799999996 677889999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1090 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1090 ~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+.|++|+++.. ++++++++++|++.|+++++++|++|.++|+|+||++++++|..++++++++.+.+..++
T Consensus 614 ~~Gi~vevd~~-~~~l~kkir~A~~~g~~~viivG~~E~~~~~V~vr~~~~~~q~~i~l~el~~~l~~~~~~ 684 (686)
T PLN02908 614 AAGFYVDVDVT-DRKIQKKVREAQLAQYNYILVVGEAEAATGTVNVRTRDNVVHGEKKIEELLTEFKEERAE 684 (686)
T ss_pred HCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECchHHhCCEEEEEECCCCceeeeeHHHHHHHHHHHHhh
Confidence 99999998775 779999999999999999999999999999999999999999999999999998877653
|
|
| >KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-31 Score=294.07 Aligned_cols=249 Identities=25% Similarity=0.404 Sum_probs=188.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh--ccCCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+....+.+.||+|.||.||+|... ++.||||+++.. ..+.+..|-.+.+- +.|+||++++++= +.+
T Consensus 209 l~pl~l~eli~~Grfg~V~KaqL~--~~~VAVKifp~~-----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~e-kr~---- 276 (534)
T KOG3653|consen 209 LDPLQLLELIGRGRFGCVWKAQLD--NRLVAVKIFPEQ-----EKQSFQNEKNIYSLPGMKHENILQFIGAE-KRG---- 276 (534)
T ss_pred CCchhhHHHhhcCccceeehhhcc--CceeEEEecCHH-----HHHHHHhHHHHHhccCccchhHHHhhchh-ccC----
Confidence 456777899999999999999886 799999999743 34556666666554 5899999998652 100
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
......+++|++|.+ |+|.++|..+ .+++....+++..+++||+|||
T Consensus 277 -------------------------------t~~~~eywLVt~fh~kGsL~dyL~~n-tisw~~~cria~SmarGLa~LH 324 (534)
T KOG3653|consen 277 -------------------------------TADRMEYWLVTEFHPKGSLCDYLKAN-TISWNSLCRIAESMARGLAHLH 324 (534)
T ss_pred -------------------------------CccccceeEEeeeccCCcHHHHHHhc-cccHHHHHHHHHHHHHHHHHhc
Confidence 012456899999997 7999999764 5899999999999999999999
Q ss_pred hC---------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 511 GQ---------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 511 s~---------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
+. .|+|||||++|||+.+|+++.|+|||+|..+....- ..+..+.+||.+|||||+|.
T Consensus 325 ee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~-------------~~d~~~qVGT~RYMAPEvLE 391 (534)
T KOG3653|consen 325 EELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKP-------------QGDTHGQVGTRRYMAPEVLE 391 (534)
T ss_pred ccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCC-------------CcchhhhhhhhhhcCHHHHh
Confidence 63 599999999999999999999999999998753210 11224479999999999998
Q ss_pred CCCCCC-----ccchhHHHHHHHHHhhc---------------CCCc-------hhHHHHHHHHhhhcCCCCCccccCC-
Q 001059 582 GWPKID-----EKADMYSLGIVFFELWH---------------PFST-------AMERQIVLSDLKQKGELPPSWVAKF- 633 (1170)
Q Consensus 582 ~~~~~~-----~ksDIwSlGviL~ELlt---------------Pf~~-------~~~~~~~~~~l~~~~~~p~~~~~~~- 633 (1170)
|.-+.. .+.||||+|.+||||++ ||.. ..+++...-..+..+.+|..|....
T Consensus 392 gainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~ 471 (534)
T KOG3653|consen 392 GAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAG 471 (534)
T ss_pred hhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCcc
Confidence 843333 36899999999999973 3321 1122233333334556677776542
Q ss_pred -HHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 634 -SEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 634 -~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.-+++.+..||+.||+.|.|+.=+-+
T Consensus 472 ~~~l~et~EeCWDhDaeARLTA~Cv~e 498 (534)
T KOG3653|consen 472 MAVLCETIEECWDHDAEARLTAGCVEE 498 (534)
T ss_pred HHHHHHHHHHHcCCchhhhhhhHHHHH
Confidence 35689999999999999999875543
|
|
| >KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-31 Score=273.67 Aligned_cols=253 Identities=21% Similarity=0.372 Sum_probs=200.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++++++|+|-|++||.|.+..+++.++||+++.. ....+.||+.+|..|. ||||+++++...++
T Consensus 36 ~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV-----kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp----- 105 (338)
T KOG0668|consen 36 NQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV-----KKKKIKREIKILQNLRGGPNIIKLLDIVKDP----- 105 (338)
T ss_pred ccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH-----HHHHHHHHHHHHHhccCCCCeeehhhhhcCc-----
Confidence 468999999999999999999999999999999999742 3457999999999997 99999999775432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.+....+++||+.. +...+. ..++...++.++.+++.||.|||
T Consensus 106 ---------------------------------~SktpaLiFE~v~n~Dfk~ly---~tl~d~dIryY~~elLkALdyCH 149 (338)
T KOG0668|consen 106 ---------------------------------ESKTPSLIFEYVNNTDFKQLY---PTLTDYDIRYYIYELLKALDYCH 149 (338)
T ss_pred ---------------------------------cccCchhHhhhhccccHHHHh---hhhchhhHHHHHHHHHHHHhHHH
Confidence 23455789999975 555554 34788889999999999999999
Q ss_pred hCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|+||+|||+||.|+|||.. -.++|+|+|+|.++.+.. .-+..+.+..|--||.+-..+.|+.+
T Consensus 150 S~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~----------------eYnVRVASRyfKGPELLVdy~~YDYS 213 (338)
T KOG0668|consen 150 SMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGK----------------EYNVRVASRYFKGPELLVDYQMYDYS 213 (338)
T ss_pred hcCcccccCCcceeeechhhceeeeeecchHhhcCCCc----------------eeeeeeehhhcCCchheeechhcccc
Confidence 9999999999999999975 579999999999875432 12345778889999999988889999
Q ss_pred chhHHHHHHHHHhhc---CCCchh-HHHHHHHHhhh-------------cCCCCCcc---------------------cc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLKQ-------------KGELPPSW---------------------VA 631 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~-------------~~~~p~~~---------------------~~ 631 (1170)
-|||||||+|..|+- ||.... +.....++.+- ...+++.+ .-
T Consensus 214 LD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl 293 (338)
T KOG0668|consen 214 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHL 293 (338)
T ss_pred HHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCcccccc
Confidence 999999999999984 876432 22222211110 00111111 11
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+|++.+|+.++|..|..+|+|+.|++.||||....
T Consensus 294 ~~peaiDlldklLrYDHqeRlTakEam~HpyF~~~~ 329 (338)
T KOG0668|consen 294 VSPEAIDLLDKLLRYDHQERLTAKEAMAHPYFAPVR 329 (338)
T ss_pred CChHHHHHHHHHHhhccccccchHHHhcCchHHHHH
Confidence 348999999999999999999999999999987654
|
|
| >KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-31 Score=311.36 Aligned_cols=246 Identities=30% Similarity=0.441 Sum_probs=185.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
-+..-+.||+|+||.||+++++.+|+.||||.++... .....+...+|+++|++++|||||++++.= ++.
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~-~~r~~e~~~~EieilkKLnh~NIVk~f~ie-e~~-------- 83 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKES-SLRPRERWCREIEILKKLNHPNIVKLFDIE-ETK-------- 83 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhc-ccchHHHHHHHHHHHHHcCchhhhhhcccC-Ccc--------
Confidence 3455578999999999999999999999999987533 445567888999999999999999998642 110
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.. | .-...-.++||||. |||...+++. .++++.+.+.++.+++.||.|||.
T Consensus 84 -~~-~-----------------------~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrE 138 (732)
T KOG4250|consen 84 -FL-G-----------------------LVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRE 138 (732)
T ss_pred -cc-C-----------------------cccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 01234579999996 6999999753 469999999999999999999999
Q ss_pred CCccccCCCCCceeec--CCC--CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 512 QGIIHRDLTPNNIFFD--ARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~--~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
+|||||||||.||++- .+| .-||+|||.|+-+..+. ..++.+||+.|.+||.+.....|+
T Consensus 139 n~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s----------------~~~S~vGT~~YLhPel~E~q~~y~ 202 (732)
T KOG4250|consen 139 NGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNS----------------LFTSLVGTEEYLHPELYERQKKYT 202 (732)
T ss_pred cCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCC----------------eeeeecCchhhcChHHHhhccCcC
Confidence 9999999999999984 334 47999999999765332 236789999999999998546799
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH----HHHHHHHhhhcC-------------C------CCCccccCCH----HHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME----RQIVLSDLKQKG-------------E------LPPSWVAKFS----EQE 637 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~----~~~~~~~l~~~~-------------~------~p~~~~~~~~----e~~ 637 (1170)
..+|.|||||++|+++| ||.+... .+....++..+. + +|. ....++ .+.
T Consensus 203 ~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~v~i~~~~~eNgpv~~s~~lP~-p~~Ls~~l~~~~~ 281 (732)
T KOG4250|consen 203 ATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSGVAIGAQEEENGPVEWSSTLPQ-PNHLSRGLATRLT 281 (732)
T ss_pred ceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCceeEeeecccCCceeeeccCCC-cccccHHHHhhhh
Confidence 99999999999999998 6654322 223332222211 1 111 112222 345
Q ss_pred HHHHHccCCCCCCCCC
Q 001059 638 SLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPt 653 (1170)
.++..+|..+|.+|..
T Consensus 282 kwLa~~L~~~~~~~~~ 297 (732)
T KOG4250|consen 282 KWLASMLEWNPRKRGH 297 (732)
T ss_pred HHHHHHHhhhHHHhCC
Confidence 7888889999998884
|
|
| >KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-31 Score=285.56 Aligned_cols=256 Identities=27% Similarity=0.383 Sum_probs=199.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+|.-++.+|.|.- .|..|-+...+++||+|+............+..+|..++..++|+||++++.+|.-
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP--------- 86 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTP--------- 86 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCc---------
Confidence 45666788999988 78888898899999999987665555566789999999999999999999988721
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
+........+|+||||+..+|.+.+. -.++...+..+++|++.|++|||+.||
T Consensus 87 -------------------------~~~l~~~~e~y~v~e~m~~nl~~vi~--~elDH~tis~i~yq~~~~ik~lhs~~I 139 (369)
T KOG0665|consen 87 -------------------------QKTLEEFQEVYLVMELMDANLCQVIL--MELDHETISYILYQMLCGIKHLHSAGI 139 (369)
T ss_pred -------------------------cccHHHHHhHHHHHHhhhhHHHHHHH--HhcchHHHHHHHHHHHHHHHHHHhcce
Confidence 22223456789999999999999887 347888999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+||++..++.+||.|||+|+... ..+..+.++.|..|.|||++.+.+ |...+||||
T Consensus 140 ihRdLkPsnivv~~~~~lKi~dfg~ar~e~----------------~~~~mtpyVvtRyyrapevil~~~-~ke~vdiwS 202 (369)
T KOG0665|consen 140 IHRDLKPSNIVVNSDCTLKILDFGLARTED----------------TDFMMTPYVVTRYYRAPEVILGMG-YKENVDIWS 202 (369)
T ss_pred eecccCcccceecchhheeeccchhhcccC----------------cccccCchhheeeccCchheeccC-Ccccchhhh
Confidence 999999999999999999999999998532 224567789999999999999954 999999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhh---------------------h----------cCCCCC-ccc-------cC
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLK---------------------Q----------KGELPP-SWV-------AK 632 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~---------------------~----------~~~~p~-~~~-------~~ 632 (1170)
+||++.||++ -|.+........++.. . ...+|. .|. ..
T Consensus 203 vGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~ 282 (369)
T KOG0665|consen 203 VGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLD 282 (369)
T ss_pred hhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccc
Confidence 9999999974 1211111111100000 0 000111 010 11
Q ss_pred CHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 633 FSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 633 ~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
...+++++.+||..||++|.+++++|+||+++
T Consensus 283 ~~~ardll~~MLvi~pe~Risv~daL~HPY~~ 314 (369)
T KOG0665|consen 283 CSLARDLLSKMLVIDPEKRISVDDALRHPYIK 314 (369)
T ss_pred hHHHHHHHHHhhccChhhcccHHHHhcCCeee
Confidence 23568999999999999999999999999887
|
|
| >KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.9e-32 Score=283.98 Aligned_cols=261 Identities=28% Similarity=0.402 Sum_probs=204.2
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
|.+--+.||-|+||.||.+.+..+|+.||+|++.....+.....++.+|+++|..++|.|++..++...-+ ..
T Consensus 54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPp-h~------ 126 (449)
T KOG0664|consen 54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPA-NP------ 126 (449)
T ss_pred cCCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCC-Cc------
Confidence 33445789999999999999999999999999876666666678899999999999999999887654211 00
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIi 515 (1170)
.+ -..+|+++|++..+|..++.+...++...++-+++||++||+|||+.||.
T Consensus 127 ---------df-------------------FqEiYV~TELmQSDLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~IL 178 (449)
T KOG0664|consen 127 ---------SF-------------------FQELYVLTELMQSDLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANIL 178 (449)
T ss_pred ---------hH-------------------HHHHHHHHHHHHhhhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchh
Confidence 00 12368999999999999999889999999999999999999999999999
Q ss_pred ccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHH
Q 001059 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595 (1170)
Q Consensus 516 HrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSl 595 (1170)
||||||.|.|+++++.+||||||+|+.....+ +..++..+-|.+|.|||++.|...|+.+.||||+
T Consensus 179 HRDIKPGNLLVNSNCvLKICDFGLARvee~d~--------------~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSV 244 (449)
T KOG0664|consen 179 HRDIKPGNLLVNSNCILKICDFGLARTWDQRD--------------RLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSV 244 (449)
T ss_pred hccCCCccEEeccCceEEecccccccccchhh--------------hhhhHHHHHHHHhccHHHhhcchhhcCccceehh
Confidence 99999999999999999999999999754332 2234556789999999999998889999999999
Q ss_pred HHHHHHhhc---CCCchhHHHHH-----------------------HHHhhhcCCCCCccc---------cCCHHHHHHH
Q 001059 596 GIVFFELWH---PFSTAMERQIV-----------------------LSDLKQKGELPPSWV---------AKFSEQESLL 640 (1170)
Q Consensus 596 GviL~ELlt---Pf~~~~~~~~~-----------------------~~~l~~~~~~p~~~~---------~~~~e~~~LI 640 (1170)
|||+.||+. -|....+-+.. ..+++ .+..+|... ....+...++
T Consensus 245 GCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR-~~~k~Ps~~vLYtlsS~~~~~heav~~~ 323 (449)
T KOG0664|consen 245 GCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLR-AGLRAPDTQRLYKIASPDDKNHEAVDLL 323 (449)
T ss_pred hHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhc-cCCCCCCccceeeecCCcccchHHHHHH
Confidence 999999973 22221111110 11122 222222221 1223567899
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
..++..||++|.+.++.++|+....-
T Consensus 324 ~~~l~~d~dkris~~~A~~~~~~~e~ 349 (449)
T KOG0664|consen 324 QKLLHFDPDKRISVEEALQHRYLEEG 349 (449)
T ss_pred HHHhCCCCcccccHhhhccccccccc
Confidence 99999999999999999999876554
|
|
| >KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.7e-31 Score=312.93 Aligned_cols=247 Identities=34% Similarity=0.484 Sum_probs=190.2
Q ss_pred EeeeccCCcEE-EEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCCCCCC
Q 001059 360 LQPLGHGGFGH-VVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 360 ~~~LG~G~fG~-Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
-+.+|.|+.|+ ||+|... |+.||||.+-. +...-..||+..|+.- .|||||++|+. |
T Consensus 514 ~eilG~Gs~Gt~Vf~G~ye--~R~VAVKrll~-----e~~~~A~rEi~lL~eSD~H~NviRyyc~--E------------ 572 (903)
T KOG1027|consen 514 KEILGYGSNGTVVFRGVYE--GREVAVKRLLE-----EFFDFAQREIQLLQESDEHPNVIRYYCS--E------------ 572 (903)
T ss_pred HHHcccCCCCcEEEEEeeC--CceehHHHHhh-----HhHHHHHHHHHHHHhccCCCceEEEEee--c------------
Confidence 35689999886 7999886 89999997742 2234577999999888 69999999854 2
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCC---CHHHHHHHHHHHHHHHHHHHhCC
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHF---DKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l---~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
.+..++||..|+|..+|.+++... ..+ ..-..+.++.|+++||+|||+.+
T Consensus 573 --------------------------~d~qF~YIalELC~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~ 626 (903)
T KOG1027|consen 573 --------------------------QDRQFLYIALELCACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK 626 (903)
T ss_pred --------------------------cCCceEEEEehHhhhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc
Confidence 346789999999999999999874 111 11345788999999999999999
Q ss_pred ccccCCCCCceeecC---C--CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 514 IIHRDLTPNNIFFDA---R--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 514 IiHrDLKp~NILi~~---~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||||||||.||||+. + ..++|+|||+++.+.... ..++ ...+..||-+|+|||++.. ..-+.
T Consensus 627 iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~-----------sS~~-r~s~~sGt~GW~APE~L~~-~~~~~ 693 (903)
T KOG1027|consen 627 IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGK-----------SSFS-RLSGGSGTSGWQAPEQLRE-DRKTQ 693 (903)
T ss_pred cccccCCCceEEEEccCCCcceeEEecccccccccCCCc-----------chhh-cccCCCCcccccCHHHHhc-cccCc
Confidence 999999999999976 3 368999999999874332 1111 1455679999999999998 44577
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
++||||+||++|+.++ ||.....++.- ++......-.-.+....++.+||.+|++++|..||+|.++|.||||-
T Consensus 694 avDiFslGCvfyYvltgG~HpFGd~~~R~~N--Il~~~~~L~~L~~~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW 771 (903)
T KOG1027|consen 694 AVDIFSLGCVFYYVLTGGSHPFGDSLERQAN--ILTGNYTLVHLEPLPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFW 771 (903)
T ss_pred ccchhhcCceEEEEecCCccCCCchHHhhhh--hhcCccceeeeccCchHHHHHHHHHhcCCCcccCCCHHHHhCCCccC
Confidence 9999999999999986 99887766543 23322221111001011899999999999999999999999999988
Q ss_pred CchH
Q 001059 665 QMEY 668 (1170)
Q Consensus 665 ~~~~ 668 (1170)
..+.
T Consensus 772 ~~ek 775 (903)
T KOG1027|consen 772 DSEK 775 (903)
T ss_pred ChHH
Confidence 7764
|
|
| >smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.7e-29 Score=274.86 Aligned_cols=238 Identities=34% Similarity=0.566 Sum_probs=193.5
Q ss_pred CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccc
Q 001059 367 GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASST 446 (1170)
Q Consensus 367 ~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~ 446 (1170)
+||.||+|.+..+|+.+|+|++........ ...+.+|+..+++++|+||+++++++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~~e~~~~~~l~~~~i~~~~~~~~~--------------------- 58 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK-RERILREISILKKLKHPNIVRLYDVFED--------------------- 58 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccH-HHHHHHHHHHHHhCCCCcHHHHHhheee---------------------
Confidence 589999999998899999999875443321 5789999999999999999999877632
Q ss_pred cccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCcee
Q 001059 447 FSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525 (1170)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NIL 525 (1170)
....+++|||+++ +|..++.....++...++.++.+++.++.|||+.+++|+||+|+||+
T Consensus 59 -------------------~~~~~l~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~ 119 (244)
T smart00220 59 -------------------EDKLYLVMEYCDGGDLFDLLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENIL 119 (244)
T ss_pred -------------------CCEEEEEEeCCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeE
Confidence 2567999999986 99999887666999999999999999999999999999999999999
Q ss_pred ecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc-
Q 001059 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH- 604 (1170)
Q Consensus 526 i~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt- 604 (1170)
++.++.++|+|||.+....... ......++..|+|||.+.+ ..++.++||||||+++|+|++
T Consensus 120 ~~~~~~~~l~d~~~~~~~~~~~----------------~~~~~~~~~~~~~pE~~~~-~~~~~~~Di~slG~~l~~l~~~ 182 (244)
T smart00220 120 LDEDGHVKLADFGLARQLDPGG----------------LLTTFVGTPEYMAPEVLLG-KGYGKAVDVWSLGVILYELLTG 182 (244)
T ss_pred ECCCCcEEEccccceeeecccc----------------ccccccCCcCCCCHHHHcc-CCCCchhhHHHHHHHHHHHHhC
Confidence 9999999999999998753221 1234568889999999886 567889999999999999996
Q ss_pred --CCCchhHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 605 --PFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 605 --Pf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
||.............. ....+ ......+.++.+++.+||..+|++||++.++++|+|+
T Consensus 183 ~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~ 244 (244)
T smart00220 183 KPPFPGDDQLLELFKKIG-KPKPPFPPPEWKISPEAKDLIRKLLVKDPEKRLTAEEALQHPFF 244 (244)
T ss_pred CCCCCCCCcHHHHHHHHh-ccCCCCccccccCCHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence 7755333333333332 22222 1211156789999999999999999999999999986
|
Phosphotransferases. Serine or threonine-specific kinase subfamily. |
| >PLN03224 probable serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-29 Score=299.79 Aligned_cols=267 Identities=18% Similarity=0.261 Sum_probs=182.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEc----------------cCCcEEEEEEEecCCCChh------------hHHHHHH
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNK----------------LDGRHYAVKKIRLKDKSLP------------VNDRILR 403 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~----------------~tg~~vAVK~i~~~~~~~~------------~~~~~~~ 403 (1170)
...++|++.++||+|+||+||+|.+. ..++.||||.+........ ..+....
T Consensus 142 ~~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 142 WSSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred ccccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 34689999999999999999999752 2456899999865322100 1122344
Q ss_pred HHHHHHhccCCCc-----eeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-
Q 001059 404 EVATLSRLQHQHV-----VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 477 (1170)
Q Consensus 404 Ev~iL~~l~HpnI-----V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~- 477 (1170)
|+..+.+++|.++ ++++++|.... .+........|+||||++
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~--------------------------------~~g~~~~~~~~LV~Ey~~~ 269 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNT--------------------------------ADGAFTKGSQWLVWKFESD 269 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhccccc--------------------------------ccccccCCceEEEEEcCCC
Confidence 6777777766654 44555542210 001112345799999997
Q ss_pred CcHHHHHHhc------------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEE
Q 001059 478 RTLRQVFESY------------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533 (1170)
Q Consensus 478 gsL~~~l~~~------------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vK 533 (1170)
++|.++++.. ..+++..++.++.|++.||.|||+++|+||||||+|||++.++.+|
T Consensus 270 gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~k 349 (507)
T PLN03224 270 ATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVK 349 (507)
T ss_pred CcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEE
Confidence 5898887632 1245677889999999999999999999999999999999999999
Q ss_pred EeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC-------------------C--Cccchh
Q 001059 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-------------------I--DEKADM 592 (1170)
Q Consensus 534 L~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-------------------~--~~ksDI 592 (1170)
|+|||+++...... ........+|+.|+|||++..... | ..+.||
T Consensus 350 L~DFGla~~~~~~~--------------~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~Dv 415 (507)
T PLN03224 350 IIDFGAAVDMCTGI--------------NFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDS 415 (507)
T ss_pred EEeCcCccccccCC--------------ccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccch
Confidence 99999997542111 011122345899999998754211 1 234799
Q ss_pred HHHHHHHHHhhc----CCCchhH--HHH-----HHH---Hhh-hcCCCCCccccCCHHHHHHHHHccCCCC---CCCCCH
Q 001059 593 YSLGIVFFELWH----PFSTAME--RQI-----VLS---DLK-QKGELPPSWVAKFSEQESLLRRLMSPSP---SDRPSA 654 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~--~~~-----~~~---~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP---~~RPta 654 (1170)
||+||++|+|++ ||..... .+. ... ... ....+ +.+...++...+|+.+||..+| .+|+|+
T Consensus 416 wSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~~~-~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa 494 (507)
T PLN03224 416 YTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKYDF-SLLDRNKEAGWDLACKLITKRDQANRGRLSV 494 (507)
T ss_pred hhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCCCc-ccccccChHHHHHHHHHhccCCCCcccCCCH
Confidence 999999999986 4432111 000 000 011 11112 2345667889999999999876 689999
Q ss_pred HHHHhccCCCC
Q 001059 655 TELLQDALPPQ 665 (1170)
Q Consensus 655 ~eiL~~~~~~~ 665 (1170)
.++|+||||..
T Consensus 495 ~eaL~Hp~f~~ 505 (507)
T PLN03224 495 GQALSHRFFLP 505 (507)
T ss_pred HHHhCCCCcCC
Confidence 99999999864
|
|
| >KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-29 Score=307.49 Aligned_cols=248 Identities=24% Similarity=0.337 Sum_probs=199.3
Q ss_pred CceEEeeeccCCcEEEEEEEEcc---C----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKL---D----GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~---t----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
++.+.+.||.|.||.|++|.... . ...||||.++..... .....+..|+++|+.+ +||||+.++|+|..
T Consensus 297 ~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~-~~~~~~~~El~~m~~~g~H~niv~llG~~t~-- 373 (609)
T KOG0200|consen 297 NLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASS-SEKKDLMSELNVLKELGKHPNIVNLLGACTQ-- 373 (609)
T ss_pred hccccceeecccccceEeEEEeecccccccceEEEEEEecccccCc-HHHHHHHHHHHHHHHhcCCcchhhheeeecc--
Confidence 44566699999999999998541 1 457999998755444 5677899999999999 69999999999832
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CC
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HF 490 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l 490 (1170)
...+++|+|||. |+|..+++... .+
T Consensus 374 --------------------------------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L 415 (609)
T KOG0200|consen 374 --------------------------------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDAL 415 (609)
T ss_pred --------------------------------------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCc
Confidence 356799999996 79999987655 38
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
+....+.++.||+.||+||++.++|||||-.+|||+..+..+||+|||+|+......... .+...|
T Consensus 416 ~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~--------------~~~~~~ 481 (609)
T KOG0200|consen 416 TTKDLLSFAYQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYR--------------TKSSAG 481 (609)
T ss_pred CHHHHHHHHHHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceE--------------ecCCCC
Confidence 888999999999999999999999999999999999999999999999998643222110 011122
Q ss_pred --CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 571 --TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 571 --T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
...|||||.+.. ..|+.++|||||||+|||+++ |+.+....+.+...+ ..+.....+..+++++.++|+.||
T Consensus 482 ~LP~kWmApEsl~~-~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l-~~G~r~~~P~~c~~eiY~iM~~CW 559 (609)
T KOG0200|consen 482 TLPVKWMAPESLFD-RVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFL-KEGNRMEQPEHCSDEIYDLMKSCW 559 (609)
T ss_pred ccceeecCHHHhcc-CcccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHH-hcCCCCCCCCCCCHHHHHHHHHHh
Confidence 345999999998 789999999999999999996 776643233334433 366666666677899999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.+|.+||++.++...
T Consensus 560 ~~~p~~RP~F~~~~~~ 575 (609)
T KOG0200|consen 560 NADPEDRPTFSECVEF 575 (609)
T ss_pred CCCcccCCCHHHHHHH
Confidence 9999999999999863
|
|
| >KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.3e-28 Score=275.06 Aligned_cols=134 Identities=23% Similarity=0.384 Sum_probs=116.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-----C---CCceeEEEEEeec
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----H---QHVVRYYQAWFET 426 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-----H---pnIV~l~~~~~e~ 426 (1170)
.+|.++++||.|.|++||+|.+..+.+.||+|+.+. .....+..+.|+++|++++ | .+||++++.|...
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS---AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS---AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh---hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 689999999999999999999999999999999873 2334567889999999983 3 3699999988554
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh--cCCCCHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qI~~ 504 (1170)
| ....+++||+|+++.+|..++.. +..++...++.|++||+.
T Consensus 155 G------------------------------------pNG~HVCMVfEvLGdnLLklI~~s~YrGlpl~~VK~I~~qvL~ 198 (590)
T KOG1290|consen 155 G------------------------------------PNGQHVCMVFEVLGDNLLKLIKYSNYRGLPLSCVKEICRQVLT 198 (590)
T ss_pred C------------------------------------CCCcEEEEEehhhhhHHHHHHHHhCCCCCcHHHHHHHHHHHHH
Confidence 3 24678999999999999999975 457999999999999999
Q ss_pred HHHHHHh-CCccccCCCCCceeec
Q 001059 505 GLAHIHG-QGIIHRDLTPNNIFFD 527 (1170)
Q Consensus 505 gL~yLHs-~gIiHrDLKp~NILi~ 527 (1170)
||.|||. .||||-||||+|||+.
T Consensus 199 GLdYLH~ecgIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 199 GLDYLHRECGIIHTDLKPENVLLC 222 (590)
T ss_pred HHHHHHHhcCccccCCCcceeeee
Confidence 9999997 5999999999999984
|
|
| >TIGR00409 proS_fam_II prolyl-tRNA synthetase, family II | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.2e-28 Score=296.06 Aligned_cols=443 Identities=13% Similarity=0.109 Sum_probs=269.1
Q ss_pred hcccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCcee
Q 001059 704 HHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLL 777 (1170)
Q Consensus 704 ~~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~l 777 (1170)
..+|.++ +.+.|+.+|+|.+.++++.|++.+++.+.++||++|.||.| ++. +.++...++||+|.|++|+.+
T Consensus 27 ~rag~i~--~~~~G~~~~lP~g~rv~~~I~~~i~~~~~~~G~~ei~~P~l~~~el~~~sg~~~~~~~emf~~~dr~~~~l 104 (568)
T TIGR00409 27 LRAGFIR--RLGSGLYNWLPLGLRVLKKVENIVREEMNKDGAIEVLLPALQPAELWQESGRWDTYGPELLRLKDRKGREF 104 (568)
T ss_pred HhCCCcc--ccCCceEEECChHHHHHHHHHHHHHHHHHHcCCEEEECCccchHHHHhhcCCCCccchhcEEEecCCCCEE
Confidence 3455554 67899999999999999999999999999999999999999 222 235667899999999999999
Q ss_pred eecCC----CCHHHHHHHHhCCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHHHHH---HHHH
Q 001059 778 ELSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKV---TMDI 846 (1170)
Q Consensus 778 aLRPD----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvi~l---a~~~ 846 (1170)
+|||+ +|..++|.+.+++..|+|+||+|++||+| +|+. |.+||+|.+++.||.+...+|+|...+ ..++
T Consensus 105 ~LrPT~Ee~~t~~~~~~i~syr~LPlrlyqi~~~fR~E~rpr~Gl~R~REF~~~d~~~f~~~~~~a~~e~~~~~~~y~~i 184 (568)
T TIGR00409 105 VLGPTHEEVITDLARNEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFIMKDAYSFHSDEESLDATYQKMYQAYSNI 184 (568)
T ss_pred EEcCCCcHHHHHHHHHHHhhccccCeEEEEeeCEeeCCCCCCCCccccccEEEEEEEEEeCChHHHHHHHHHHHHHHHHH
Confidence 99997 89888889888888899999999999998 8876 456799999999999989999888755 5999
Q ss_pred HHHcCCCcceEEEeCcHHHHHHHH------------------HHhCCCHHHHHHHHHHHHHhcCCCCCcccc--cchHHH
Q 001059 847 VTRFFHAESCDIHLNHGDLLEAIW------------------SWAGIKAEHREKVAELLAMMGSLRPQSSEW--KSKWVV 906 (1170)
Q Consensus 847 l~~lgi~~~~~i~lg~~~il~~~l------------------~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~--~~~~~~ 906 (1170)
+++||++ +.+..++++.+.+.. ..++...+...+.. .....+.-....... .... .
T Consensus 185 f~~LgL~--~~~v~~~~g~~gg~~s~ef~~~~~~ge~~i~~c~~~~y~an~e~a~~-~~~~~~~~~~~~~~~~~tp~~-~ 260 (568)
T TIGR00409 185 FSRLGLD--FRPVQADSGAIGGSASHEFMVLAESGEDTIVYSDESDYAANIELAEA-LAPGERNAPTAELDKVDTPNT-K 260 (568)
T ss_pred HHHhCCc--ceEEEeccccCCCccceEEeEecCCCceEEEEecCcccchhhhhhcc-cCccccccccccceeecCCCC-C
Confidence 9999994 888777665443221 11111111000000 000000000000000 0000 0
Q ss_pred HHHHHHHHcCCcHHHHHH--HH-------HHH-HHhcCChhhHHHHHhccCCC----ChhHHHHHHHH------HHHHcc
Q 001059 907 IRRQLLQELNLAEAVVNR--LQ-------TVG-LRFCGAADQALPRLRGALPA----DKPTRKALDEL------YLRIWR 966 (1170)
Q Consensus 907 ~~~~~~~~~~l~~~~~~~--l~-------~l~-~~~~g~~~~~l~~l~~~~~~----~~~~~~~l~~L------~l~~~g 966 (1170)
...++....+++....-+ +. .+. ..+.|+.+--..+++..+.. .....+.+... ++.-.|
T Consensus 261 ti~~~~~~~~~~~~~~~k~~~~~~~~~~~~~v~v~~rgd~~vn~~k~~~~~g~~~~~~~a~~~~~~~~~g~~~g~~gpv~ 340 (568)
T TIGR00409 261 TIAELVECFNLPAEKVVKTLLVKAVDKSEPLVALLVRGDHELNEVKAPNLLLVAQVLELATEEEIFQKIASGPGSLGPVN 340 (568)
T ss_pred cHHHHHHHhCCCHhHeeeEEEEEecCCccceEEEEecCcchhhHHHHHHHhccCcccccCCHHHHHHhhCCCCCccCccc
Confidence 001111111111110000 00 000 01123222222222222100 00001111111 111111
Q ss_pred Cc--ceEEEccCCCCCCCc----------ccceEEE----------E--EeccCCCcc---ccc-----ccc-eeccccc
Q 001059 967 IE--KNIYIDALMPPIESY----------HRNLFFQ----------V--FSVKEKYPA---TLV-----EGT-LLAVGGR 1013 (1170)
Q Consensus 967 ~~--~~i~~Dl~lvrgldY----------YtG~VFe----------~--~~~~~~~~~---~~~-----~~~-~I~~GGR 1013 (1170)
+. .++..|.++...-++ |++..+. + ...+...|. ++. +.+ ..-=|=|
T Consensus 341 ~~~~~~i~~D~~~~~~~~~~~gan~~~~h~~~~~~~rd~~~~~~~d~~~~~eGd~cp~c~~~l~~~rgIEvGhiF~LG~k 420 (568)
T TIGR00409 341 INGGIPVLIDQTVALMSDFAAGANADDKHYFNVNWDRDVAIPEVADIRKVKEGDPSPDGQGTLKIARGIEVGHIFQLGTK 420 (568)
T ss_pred cccCceEEechhhhcccccccccCCCCceeecccccccCCccccchhhhhhccCCCCCCCCcccccceEEEEEeccchhh
Confidence 21 245556654433333 2222211 0 001111110 010 111 1112446
Q ss_pred cchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhcc------CCCCCCCCCCCceEEEEEcCCC--ccHHHHHHHH
Q 001059 1014 YDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP------VDFKPVRNEAGTSVLVCSRGGG--GLLVERMELV 1085 (1170)
Q Consensus 1014 YD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~------~~~~~~~~~~~~~vlv~~~~~~--~~~~~a~~ia 1085 (1170)
|-.- ||.. +....|+..++.-.-++||++||+.++. .+..++...+|.+|.|++.... .....|.++.
T Consensus 421 YS~~---~~~~-~~d~~g~~~~~~mgcyGIGvsRli~aiie~~~D~~Gl~wP~~iAP~qV~Iip~~~~~~~~~~~a~~l~ 496 (568)
T TIGR00409 421 YSEA---LKAT-FLDENGKNQFMTMGCYGIGVSRLVSAIAEQHHDERGIIWPKAIAPYDVVIVVMNMKDEEQQQLAEELY 496 (568)
T ss_pred hHHh---cCCE-EECCCCCEEEEEEeCCcchHHHHHHHHHHHhCccCCCcCChhhCCeEEEEEEcCCChHHHHHHHHHHH
Confidence 6543 3221 1222333343333345789999987763 3445555678999999987422 3566788899
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 001059 1086 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1157 (1170)
Q Consensus 1086 ~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~ 1157 (1170)
+.|++.|++|.+++. +.+++++++.|+..|+|+.|+||.+++++|+|+|++++++++..|+++++++.+..
T Consensus 497 ~~L~~~gi~v~~DDr-~~~~G~K~~dadliGiP~~i~vG~~~l~~~~Vei~~R~~~~~~~v~~~~l~~~i~~ 567 (568)
T TIGR00409 497 SELLAQGVDVLLDDR-NERAGVKFADSELIGIPLRVVVGKKNLDNGEIEVKKRRNGEKQLIKKDELVECLEE 567 (568)
T ss_pred HHHHhCCCEEEEECC-CCCHHHHHHhhhhcCCCEEEEECCCcccCCeEEEEEcCCCceEEEEHHHHHHHHhh
Confidence 999999999998776 56899999999999999999999999999999999999999999999999887753
|
Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent groups. This group includes enzymes from Escherichia coli, Bacillus subtilis, Aquifex aeolicus, the spirochete Treponema pallidum, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae. The other group includes the Pro-specific domain of a human multifunctional tRNA ligase and the prolyl-tRNA synthetases from the Archaea, the Mycoplasmas, and the spirochete Borrelia burgdorferi. |
| >PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-28 Score=323.99 Aligned_cols=236 Identities=21% Similarity=0.328 Sum_probs=178.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|.....||+|+||.||+|+++.+|..||||.++.... ...+|+..+++++|||||+++++|.+
T Consensus 690 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~------~~~~~~~~l~~l~HpnIv~~~~~~~~--------- 754 (968)
T PLN00113 690 SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS------IPSSEIADMGKLQHPNIVKLIGLCRS--------- 754 (968)
T ss_pred hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc------ccHHHHHHHhhCCCCCcceEEEEEEc---------
Confidence 456667889999999999999998999999998863322 12346889999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH---
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH--- 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH--- 510 (1170)
....|+|||||+ |+|.++++. +++..+..++.||++||+|||
T Consensus 755 -------------------------------~~~~~lv~Ey~~~g~L~~~l~~---l~~~~~~~i~~~ia~~L~yLH~~~ 800 (968)
T PLN00113 755 -------------------------------EKGAYLIHEYIEGKNLSEVLRN---LSWERRRKIAIGIAKALRFLHCRC 800 (968)
T ss_pred -------------------------------CCCCEEEEeCCCCCcHHHHHhc---CCHHHHHHHHHHHHHHHHHhccCC
Confidence 234689999997 699999863 889999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+.+|+||||||+||+++.++..++. ||.+.... ......||+.|||||++.+ ..++.++
T Consensus 801 ~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~-------------------~~~~~~~t~~y~aPE~~~~-~~~~~~s 859 (968)
T PLN00113 801 SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLC-------------------TDTKCFISSAYVAPETRET-KDITEKS 859 (968)
T ss_pred CCCeecCCCCHHhEEECCCCceEEE-eccccccc-------------------cCCCccccccccCcccccC-CCCCccc
Confidence 6799999999999999999888876 66544321 0123368999999999987 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHH----HHHHHHhhh--------cCCCCC---ccccCCHHHHHHHHHccCCCCCCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMER----QIVLSDLKQ--------KGELPP---SWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~----~~~~~~l~~--------~~~~p~---~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
|||||||++|||++ ||...... ......... ...... .......++.+++.+||+.||++||
T Consensus 860 Dv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RP 939 (968)
T PLN00113 860 DIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARP 939 (968)
T ss_pred chhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCc
Confidence 99999999999997 66422110 000000000 000100 0111123567899999999999999
Q ss_pred CHHHHHhc
Q 001059 653 SATELLQD 660 (1170)
Q Consensus 653 ta~eiL~~ 660 (1170)
|+.++++.
T Consensus 940 t~~evl~~ 947 (968)
T PLN00113 940 CANDVLKT 947 (968)
T ss_pred CHHHHHHH
Confidence 99999875
|
|
| >KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification] | Back alignment and domain information |
|---|
Probab=99.96 E-value=3.7e-29 Score=281.78 Aligned_cols=251 Identities=25% Similarity=0.405 Sum_probs=196.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC------CCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH------QHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H------pnIV~l~~~~~e~~ 427 (1170)
-..|.+....|+|-|++|.+|.+..-|+.||||+|..+.. ....=++|+++|++|+. -|+++++..|.
T Consensus 431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~---M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~--- 504 (752)
T KOG0670|consen 431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV---MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK--- 504 (752)
T ss_pred cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH---HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh---
Confidence 4679999999999999999999999999999999985432 23456789999999953 47777775552
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC---CCCHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD---HFDKELAWHLFRQIVE 504 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~---~l~e~~~~~i~~qI~~ 504 (1170)
...++|+|+|-+.-+|.++|...+ .+....++.|+.|+..
T Consensus 505 -------------------------------------hknHLClVFE~LslNLRevLKKyG~nvGL~ikaVRsYaqQLfl 547 (752)
T KOG0670|consen 505 -------------------------------------HKNHLCLVFEPLSLNLREVLKKYGRNVGLHIKAVRSYAQQLFL 547 (752)
T ss_pred -------------------------------------hcceeEEEehhhhchHHHHHHHhCcccceeehHHHHHHHHHHH
Confidence 357899999999999999998776 4888999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
||..|-..||+|.||||+|||+++. ..+||||||.|.+....++ +.+.-+..|.|||++.|
T Consensus 548 ALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~enei-----------------tPYLVSRFYRaPEIiLG- 609 (752)
T KOG0670|consen 548 ALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEI-----------------TPYLVSRFYRAPEIILG- 609 (752)
T ss_pred HHHHHHhcCeeecccCccceEeccCcceeeeccCccccccccccc-----------------cHHHHHHhccCcceeec-
Confidence 9999999999999999999999875 6799999999987654432 33455678999999999
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCch--hHHHHHHHHhh--------------------------------------
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTA--MERQIVLSDLK-------------------------------------- 620 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~--~~~~~~~~~l~-------------------------------------- 620 (1170)
-.|+...|+||+||+||||+| -|.+. ..+-.+...+.
T Consensus 610 ~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~ 689 (752)
T KOG0670|consen 610 LPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKR 689 (752)
T ss_pred CcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchhhhhcccccceEEEeccccccceeE
Confidence 569999999999999999987 23322 22211111111
Q ss_pred -----------------hcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 621 -----------------QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 621 -----------------~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
....+|........++.+|+..||..||.+|.|..++|+|||+..
T Consensus 690 ~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~HpFi~~ 751 (752)
T KOG0670|consen 690 TVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALKHPFITE 751 (752)
T ss_pred EEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhcCCcccC
Confidence 011111111122235679999999999999999999999999864
|
|
| >PRK12325 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.9e-27 Score=283.07 Aligned_cols=371 Identities=11% Similarity=0.098 Sum_probs=241.6
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecC---CC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSH---EL 783 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRP---D~ 783 (1170)
..+.|+.+|+|..+.+++.|++.+++.+.++||++|.||.| ++. ++.+.+.++||+|.|.+++.++||| ++
T Consensus 34 ~~~~G~~~~lP~g~~i~~~i~~~i~~~~~~~G~~ev~~P~l~~~~l~~~sg~~~~~~~emf~~~d~~~~~~~L~Pt~e~~ 113 (439)
T PRK12325 34 QQAAGIYSWLPLGLKVLKKIENIVREEQNRAGAIEILMPTIQPADLWRESGRYDAYGKEMLRIKDRHDREMLYGPTNEEM 113 (439)
T ss_pred ccCCceEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHhhcCCccccchhheEEecCCCCEEEEcCCCcHH
Confidence 45899999999999999999999999999999999999999 222 3356788999999999999999999 77
Q ss_pred CHHHHHHHHh-CCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCc---ccHHHHHHHHHHHHHHcCCCcc
Q 001059 784 RLPFIRWAIS-NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASA---LTEAEVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 784 T~~iaR~~~~-~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~---~aDaEvi~la~~~l~~lgi~~~ 855 (1170)
+++++|.... ++..|+|+||+|+|||+| +|+. |.|||+|-++.+|+.+.. .+..+++.++.++++.||+..
T Consensus 114 ~~~~~~~~~~syrdLPlrl~q~~~~fR~E~~~~~GL~R~reF~~~D~h~f~~~~~~a~~~~~~~~~~~~~i~~~lgl~~- 192 (439)
T PRK12325 114 ITDIFRSYVKSYKDLPLNLYHIQWKFRDEIRPRFGVMRGREFLMKDAYSFDLDEEGARHSYNRMFVAYLRTFARLGLKA- 192 (439)
T ss_pred HHHHHHHHhhhchhhchHheEecCEecCCCCCCCCccccceEeEeccEEEeCCHHHHHHHHHHHHHHHHHHHHHcCCce-
Confidence 8888885554 567899999999999998 6764 556799999999987632 456799999999999999974
Q ss_pred eEEEeCcHHHHHHHH-------HHhCCCHHHHHHHH-HHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHH
Q 001059 856 CDIHLNHGDLLEAIW-------SWAGIKAEHREKVA-ELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQT 927 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l-------~~lgl~~~~~~~l~-~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ 927 (1170)
+.+.++... +.+.. ...|-++. ..+ .+.+... .. . ...|+ . ..+..
T Consensus 193 ~~v~~~~~~-~gg~~s~ef~~~~~~Ge~~~---~~c~~~~~~~~-~~-~----~~~~~---------------~-~~l~~ 246 (439)
T PRK12325 193 IPMRADTGP-IGGDLSHEFIILAETGESTV---FYDKDFLDLLV-PG-E----DIDFD---------------V-ADLQP 246 (439)
T ss_pred EEEEEccCC-CCCCcceeeEeecCCCCceE---EEcCCchhhcc-CC-C----cccCC---------------H-HHHHH
Confidence 566554321 10000 00010000 000 0000000 00 0 00000 0 11111
Q ss_pred HHHHhcCChhhHHHHHhccCCCChhHHHHHHHH-HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccc
Q 001059 928 VGLRFCGAADQALPRLRGALPADKPTRKALDEL-YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1006 (1170)
Q Consensus 928 l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L-~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~ 1006 (1170)
++..... ....+ .++ .-.+.....+ .|+...++.. .|.+|..
T Consensus 247 ~l~~~~~-----------~~~~~-------~~~~~~~~~~~~~~--~~~~~~~~ie--vg~~~~l--------------- 289 (439)
T PRK12325 247 IVDEWTS-----------LYAAT-------EEMHDEAAFAAVPE--ERRLSARGIE--VGHIFYF--------------- 289 (439)
T ss_pred HHhhhcc-----------cccch-------hhhhccCCCCcCCC--cceeecceEE--EEeeecC---------------
Confidence 1100000 00000 000 0000000000 0111122111 2223221
Q ss_pred eeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcC--CCccH
Q 001059 1007 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRG--GGGLL 1078 (1170)
Q Consensus 1007 ~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~--~~~~~ 1078 (1170)
|=+| .+.||-. +...-|....+--.-|++|++|++.+|.+ +...+...+|.+|+|++.. ++...
T Consensus 290 ----g~~y---s~~f~~~-y~d~~g~~~~i~~~~~GiGieRli~~l~e~~~d~~g~~~P~~iaP~qV~Iipi~~~~~~~~ 361 (439)
T PRK12325 290 ----GTKY---SEPMNAK-VQGPDGKEVPVHMGSYGIGVSRLVAAIIEASHDDKGIIWPESVAPFKVGIINLKQGDEACD 361 (439)
T ss_pred ----cccc---cHhcCCE-EECCCCCEEeEEEeeeECCHHHHHHHHHHHhCccCCCcCCCCcCCeEEEEEecCCCCHHHH
Confidence 1122 2333321 01122233323334678899999998862 3344444578899999983 24567
Q ss_pred HHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 001059 1079 VERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1156 (1170)
Q Consensus 1079 ~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~ 1156 (1170)
.+|.+++..||+.|++|+++.. +.++++++++|+..|+|++|+||++|+++|+|+||++.++++..++++++++.+.
T Consensus 362 ~~a~~i~~~L~~~Gi~v~~D~~-~~~lg~ki~~a~~~giP~~iiVG~~e~~~~~V~vr~r~~~~~~~v~~~el~~~i~ 438 (439)
T PRK12325 362 AACEKLYAALSAAGIDVLYDDT-DERPGAKFATMDLIGLPWQIIVGPKGLAEGKVELKDRKTGEREELSVEAAINRLT 438 (439)
T ss_pred HHHHHHHHHHHHCCCEEEEECC-CCCHhHHHHHHHHcCCCEEEEECCcccccCeEEEEEcCCCceEEEEHHHHHHHHh
Confidence 8999999999999999998876 6799999999999999999999999999999999999999999999999987764
|
|
| >KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=7.3e-29 Score=291.39 Aligned_cols=246 Identities=24% Similarity=0.329 Sum_probs=199.7
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+..++||.|+||+||+|.|...|+ +||||++.. ..+......+++|+.+|.+++|||++++++.|+..
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~-~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s------ 770 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIE-FTSPKASIELLDEALRMASLDHPNLLRLLGVCMLS------ 770 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeec-cCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccc------
Confidence 4456899999999999999976665 689998863 34445567899999999999999999999988431
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.+-||++|++ |.|.++++. ++.+-....+.|.+||++||.|||
T Consensus 771 -----------------------------------~~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe 815 (1177)
T KOG1025|consen 771 -----------------------------------TLQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE 815 (1177)
T ss_pred -----------------------------------hHHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH
Confidence 2568999998 699999875 456888889999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
.++++||||-.+|||+..-.++||.|||+|+.+...... .......-.+-|||-|.+.. ..|+.++
T Consensus 816 ~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~e-------------y~~~~gK~pikwmale~i~~-~~~thqS 881 (1177)
T KOG1025|consen 816 EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKE-------------YSAPGGKVPIKWMALESIRI-RKYTHQS 881 (1177)
T ss_pred hcchhhhhhhhhheeecCCCeEEEEecchhhccCccccc-------------ccccccccCcHHHHHHHhhc-cCCCchh
Confidence 999999999999999999999999999999987544311 11122234567999998887 6799999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++||++| |+....-+++. .+.+++...+.++.++-++.-++.+||..|+..||+++++...
T Consensus 882 DVWsfGVtiWElmTFGa~Py~gi~~~eI~--dlle~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~ 953 (1177)
T KOG1025|consen 882 DVWSFGVTIWELMTFGAKPYDGIPAEEIP--DLLEKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEE 953 (1177)
T ss_pred hhhhhhhhHHHHHhcCCCccCCCCHHHhh--HHHhccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHH
Confidence 99999999999998 77765555443 2333555555666677799999999999999999999998753
|
|
| >KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.96 E-value=9e-29 Score=251.54 Aligned_cols=199 Identities=27% Similarity=0.455 Sum_probs=164.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++..+..||+|+||.|-+.+|..+|...|+|.++..-.+ ....+.++|+.+..+. .+|.+|.+||+++..
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~-q~q~r~L~dldi~~r~~~CPf~V~FyGa~~re------ 117 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNS-QEQKRLLMDLDIIMRTVDCPFTVHFYGALFRE------ 117 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcCh-HHHHHHHHhhhhhccCCCCCeEEEeehhhhcc------
Confidence 35666778999999999999999999999999999865443 4456788898877665 799999999987543
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHH----HHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQV----FESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~----l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
..+||.||.|+.||..+ +...+.++|...-+++..+++||.|
T Consensus 118 ----------------------------------gdvwIcME~M~tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~ 163 (282)
T KOG0984|consen 118 ----------------------------------GDVWICMELMDTSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEF 163 (282)
T ss_pred ----------------------------------ccEEEeHHHhhhhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHH
Confidence 45799999999887654 4556779999999999999999999
Q ss_pred HHhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---C
Q 001059 509 IHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW---P 584 (1170)
Q Consensus 509 LHs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~---~ 584 (1170)
||++ .+||||+||+||||+.+|++||||||++-.+... ...+...|--.|||||.+... .
T Consensus 164 L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dS----------------iAkt~daGCkpYmaPEri~~e~n~~ 227 (282)
T KOG0984|consen 164 LHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDS----------------IAKTMDAGCKPYMAPERINPELNQK 227 (282)
T ss_pred HHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhh----------------hHHHHhcCCCccCChhhcCcccCcc
Confidence 9986 7999999999999999999999999999765322 112334677889999987642 2
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCch
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTA 609 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~ 609 (1170)
.|+-++||||||++++||.+ ||..+
T Consensus 228 gY~vksDvWSLGItmiElA~lr~PY~~w 255 (282)
T KOG0984|consen 228 GYSVKSDVWSLGITMIEMAILRFPYESW 255 (282)
T ss_pred cceeehhhhhhhhhhhhhhhcccccccc
Confidence 58999999999999999985 66544
|
|
| >KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.9e-29 Score=283.56 Aligned_cols=197 Identities=29% Similarity=0.501 Sum_probs=170.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--Ch----hhHHHHHHHHHHHHhcc---CCCceeEEEEEe
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SL----PVNDRILREVATLSRLQ---HQHVVRYYQAWF 424 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~--~~----~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~ 424 (1170)
..+|..++.||.|+||.|++|.++.+...|+||.|.+... +. +....+--|+.+|+.++ |+||+++++.|
T Consensus 560 ~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF- 638 (772)
T KOG1152|consen 560 FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF- 638 (772)
T ss_pred cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee-
Confidence 4679999999999999999999999999999999975431 11 11224557999999997 99999999887
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-C-cHHHHHHhcCCCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-g-sL~~~l~~~~~l~e~~~~~i~~qI 502 (1170)
++..++||+||-.+ | +|.+++.....++|.++..+++||
T Consensus 639 ---------------------------------------Eddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV 679 (772)
T KOG1152|consen 639 ---------------------------------------EDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQV 679 (772)
T ss_pred ---------------------------------------ecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHH
Confidence 34678999999985 5 999999999999999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.|+++||++||||||||-+|+.++.+|-+||+|||.|...... ....++||..|+|||++.|
T Consensus 680 ~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksg-----------------pfd~f~gtv~~aapevl~g 742 (772)
T KOG1152|consen 680 VAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSG-----------------PFDVFVGTVDYAAPEVLGG 742 (772)
T ss_pred HhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCC-----------------CcceeeeeccccchhhhCC
Confidence 99999999999999999999999999999999999999865321 1245799999999999999
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCC
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFS 607 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~ 607 (1170)
.++.+..-|||++||+||.++. ||+
T Consensus 743 ~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 743 EKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred CccCCCcchhhhhhheeeEEEeccCCCc
Confidence 7777899999999999999874 664
|
|
| >cd00180 PKc Catalytic domain of Protein Kinases | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-26 Score=238.88 Aligned_cols=212 Identities=38% Similarity=0.710 Sum_probs=181.1
Q ss_pred eccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcc
Q 001059 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTL 442 (1170)
Q Consensus 363 LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~ 442 (1170)
||.|++|.||++....+|+.+++|++....... ....+.+|+..++.++|++|+++++++..
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~-~~~~~~~e~~~~~~l~~~~i~~~~~~~~~----------------- 62 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS-LLEELLREIEILKKLNHPNIVKLYGVFED----------------- 62 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchh-HHHHHHHHHHHHHhcCCCCeeeEeeeeec-----------------
Confidence 689999999999998889999999987543321 34678999999999999999999987632
Q ss_pred cccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 443 ASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 443 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
....+++|||++ ++|.+++... ..++...++.++.+++.++++||++|++|+||+
T Consensus 63 -----------------------~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~ 119 (215)
T cd00180 63 -----------------------ENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLK 119 (215)
T ss_pred -----------------------CCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCC
Confidence 256799999998 6999998766 578999999999999999999999999999999
Q ss_pred CCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHH
Q 001059 521 PNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 599 (1170)
Q Consensus 521 p~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL 599 (1170)
|.||+++. ++.++|+|||.+........ ......+...|++||.+.....++.++|+||+|+++
T Consensus 120 ~~ni~~~~~~~~~~l~d~~~~~~~~~~~~---------------~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~ 184 (215)
T cd00180 120 PENILLDSDNGKVKLADFGLSKLLTSDKS---------------LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVIL 184 (215)
T ss_pred HhhEEEeCCCCcEEEecCCceEEccCCcc---------------hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHH
Confidence 99999999 89999999999986532210 112346788999999987733688999999999999
Q ss_pred HHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 600 FELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 600 ~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++| ..+.+++.+|++.||.+||++.++++++
T Consensus 185 ~~l-------------------------------~~~~~~l~~~l~~~p~~R~~~~~l~~~~ 215 (215)
T cd00180 185 YEL-------------------------------PELKDLIRKMLQKDPEKRPSAKEILEHL 215 (215)
T ss_pred HHH-------------------------------HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence 999 4788899999999999999999999763
|
Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which |
| >PRK04173 glycyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.3e-26 Score=268.90 Aligned_cols=324 Identities=15% Similarity=0.126 Sum_probs=226.1
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHH--cCCccccccce------eccCCCcccccceEEEe--------c------
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQ--HCAKHLEIEPM------YLLGDCPQFKRNTVKLL--------T------ 771 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~--~Gy~~I~tP~~------~~~~~~~~~~~~my~f~--------D------ 771 (1170)
-..|+.|++|..+.+++.|++.+++.|.. +||.+|.||++ ..+|+.+.+.+.||... |
T Consensus 26 ~~~g~~d~~P~G~~l~~~i~~~~r~~~~~~~~~~~ev~tp~i~~~~l~~~SGH~~~f~d~m~~~~~~~~~~r~d~~~~~~ 105 (456)
T PRK04173 26 GLAGFWDYGPLGVELKNNIKRAWWKSFVQEREDVVGIDSPIIMPPEVWEASGHVDNFSDPLVECKKCKKRYRADHLIEEL 105 (456)
T ss_pred chhcccccChhhHHHHHHHHHHHHHHHHhccCCEEEEeccccCCHHHHhhcCCccccCCceeEeCCCCCEeechhhhHHH
Confidence 35799999999999999999999999988 89999999999 33445566666666653 1
Q ss_pred -------------------------------------------------cCCceeeecCCCC----HHHHHHHHhCC-CC
Q 001059 772 -------------------------------------------------HGGDLLELSHELR----LPFIRWAISNQ-KS 797 (1170)
Q Consensus 772 -------------------------------------------------~~G~~laLRPD~T----~~iaR~~~~~~-~~ 797 (1170)
.++..+.||||.. +.+.+.+-+++ ..
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~m~cp~~~~~~~~~~~~f~l~f~~~~g~~~~~~~~~~lRpetaqg~~~~f~~~~~syr~dL 185 (456)
T PRK04173 106 GIDAEGLSNEELKELIRENDIKCPECGGENWTEVRQFNLMFKTFIGPVEDSKSLGYLRPETAQGIFVNFKNVLRTARKKL 185 (456)
T ss_pred hhhhccccHHHHHHHHHHhCCCCCCCCCCCCcCccchhhceeecccCccCCCcceeeccccchhHHHHHHHHHHhccccC
Confidence 1123456888644 23456666666 78
Q ss_pred ceeEEEecCeEEcCCCCC----CCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHH
Q 001059 798 SFKRYEISSVYRRAIGHS----PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWS 871 (1170)
Q Consensus 798 P~r~~Y~g~VfR~e~~~~----~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~ 871 (1170)
|+|++++|+|||+|.... |.|||+|..+++|+.++...+ ..+|.++.+++..+|+.. .
T Consensus 186 Plr~aq~g~~~RnE~s~~~gL~RvReF~q~e~hiF~~peq~~~e~~~~l~~~~~~l~~lG~~~-~--------------- 249 (456)
T PRK04173 186 PFGIAQIGKSFRNEITPRNFIFRTREFEQMELEFFVKPGTDNEWFAYWIELRKNWLLDLGIDP-E--------------- 249 (456)
T ss_pred CeeeeEEchhHhCccCCCCCceeeceeeeeEEEEEECcChHHHHHHHHHHHHHHHHHHcCCCc-c---------------
Confidence 999999999999985432 556799999999998775322 233444444444444432 2
Q ss_pred HhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCCh
Q 001059 872 WAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADK 951 (1170)
Q Consensus 872 ~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~ 951 (1170)
T Consensus 250 -------------------------------------------------------------------------------- 249 (456)
T PRK04173 250 -------------------------------------------------------------------------------- 249 (456)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccC-CCcccccccceeccccccchhhh--hcccccccc
Q 001059 952 PTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKE-KYPATLVEGTLLAVGGRYDYLLH--RMWDREYVG 1028 (1170)
Q Consensus 952 ~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~-~~~~~~~~~~~I~~GGRYD~L~~--~fg~~~~~~ 1028 (1170)
++.++....++++||++.+|++.+... +. ......++++||+|| |.. .|++.+ +.
T Consensus 250 ------------------~~~~s~~~~~e~~~ys~~~wd~e~~~~~g~--~~~e~~g~~~~~dyd-L~~~~~~s~~d-l~ 307 (456)
T PRK04173 250 ------------------NLRFREHLPEELAHYSKATWDIEYKFPFGR--FWGELEGIANRTDYD-LSRHSKHSGED-LS 307 (456)
T ss_pred ------------------ceEEEecCcchhhccHHHHHhHHHhCCCCC--cEEEEeeeeccchhh-cccchhhcCCC-eE
Confidence 344444444455555555554432110 00 000112578899999 653 344333 12
Q ss_pred cC----CCCCCCC-ceEEeccHHHH-HhhccCCC--------------CCCCCCCCceEEEEEcCCC-ccHHHHHHHHHH
Q 001059 1029 YA----SRTNPPS-GVGASLALETI-IQHYPVDF--------------KPVRNEAGTSVLVCSRGGG-GLLVERMELVAE 1087 (1170)
Q Consensus 1029 ~~----g~~~~~p-AvGfaiglerL-~~~L~~~~--------------~~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~ 1087 (1170)
+. ++....| .+|+|+|+||| +++|.++. ..+...+|.+|+|++.+++ .....|.++++.
T Consensus 308 y~~~~~~~~~~~P~vi~~siGieRl~~ail~~~~~~~~~~~~~~r~~l~~P~~lAP~qV~Iipi~~~~e~~~~A~~la~~ 387 (456)
T PRK04173 308 YFDDETTGEKYIPYVIEPSAGLDRLLLAFLEDAYTEEELGGGDKRTVLRLPPALAPVKVAVLPLVKKEKLSEKAREIYAE 387 (456)
T ss_pred EEecCCCCceeeeEEEEecccHHHHHHHHHHHHcccccccCCcceeEEECCCcCCCCEEEEEEecCcHHHHHHHHHHHHH
Confidence 11 1111134 55999999996 45544221 2223467889999998632 367899999999
Q ss_pred HHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 001059 1088 LWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1088 LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~ 1158 (1170)
||+. ++|+++. .+++++++++|++.|+|++|+||++|+++|+|+||++.+++|..++++++++.+.+.
T Consensus 388 LR~~-irVelD~--~~slgkkir~A~~~Gip~~IIIG~~El~~g~VtvR~r~t~eq~~v~l~el~~~l~~~ 455 (456)
T PRK04173 388 LRKD-FNVDYDD--SGSIGKRYRRQDEIGTPFCITVDFDTLEDNTVTIRDRDTMEQVRVKIDELKDYLAEK 455 (456)
T ss_pred HHhc-CEEEEeC--CCCHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEEeHHHHHHHHHhh
Confidence 9999 9999874 358999999999999999999999999999999999999999999999998887653
|
|
| >KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair] | Back alignment and domain information |
|---|
Probab=99.94 E-value=7.2e-27 Score=261.05 Aligned_cols=267 Identities=24% Similarity=0.390 Sum_probs=196.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.|..+.+||.|+|++||++.+.. .++.||+|.|..... ..++.+|++.|..+ -+.||+++.+|+-
T Consensus 35 ~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~----p~ri~~El~~L~~~gG~~ni~~~~~~~r----- 105 (418)
T KOG1167|consen 35 SNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS----PSRILNELEMLYRLGGSDNIIKLNGCFR----- 105 (418)
T ss_pred hhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC----chHHHHHHHHHHHhccchhhhcchhhhc-----
Confidence 4678899999999999999999987 688999999875433 35688999999999 6899999998862
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+||+|.+. ...+++.. ++-.++..|++.++.||++
T Consensus 106 -----------------------------------nnd~v~ivlp~~~H~~f~~l~~~---l~~~~i~~Yl~~ll~Al~~ 147 (418)
T KOG1167|consen 106 -----------------------------------NNDQVAIVLPYFEHDRFRDLYRS---LSLAEIRWYLRNLLKALAH 147 (418)
T ss_pred -----------------------------------cCCeeEEEecccCccCHHHHHhc---CCHHHHHHHHHHHHHHhhh
Confidence 35678999999986 56666544 6788999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC-CCEEEeecCcchhcccccc---ccC----CCCC-------C-------CCCCcc----
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQL---DQD----AAFP-------T-------DTGGVS---- 562 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~---~~~----~~~~-------~-------~~~~~~---- 562 (1170)
+|++|||||||||+|+|.+.. +.-.|.|||+|........ ... ...+ . .+.+..
T Consensus 148 ~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~ 227 (418)
T KOG1167|consen 148 LHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCN 227 (418)
T ss_pred hhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccC
Confidence 999999999999999999865 6788999999984322110 000 0111 0 000111
Q ss_pred ----ccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHH-HHHHHH------------hhhc
Q 001059 563 ----VDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER-QIVLSD------------LKQK 622 (1170)
Q Consensus 563 ----~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~------------l~~~ 622 (1170)
...-...||++|.|||++.+++..+.++||||.|||+.-+++ ||....+. .....+ ....
T Consensus 228 ~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~ 307 (418)
T KOG1167|consen 228 DGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALP 307 (418)
T ss_pred CCccceecccCCCCCCCchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcC
Confidence 112345799999999999998889999999999999999986 87633221 100000 0000
Q ss_pred CC-----------------------------------CCCccccCC-HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 623 GE-----------------------------------LPPSWVAKF-SEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 623 ~~-----------------------------------~p~~~~~~~-~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+. .+..+.... ..+.+|+.+||..||.+|.|++++|+||||...
T Consensus 308 g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~ 387 (418)
T KOG1167|consen 308 GRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA 387 (418)
T ss_pred CceeeeccccccccHHHHhchhccChhhcccccccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence 00 001122222 257899999999999999999999999999954
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 388 ~ 388 (418)
T KOG1167|consen 388 D 388 (418)
T ss_pred h
Confidence 3
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=6.1e-27 Score=300.92 Aligned_cols=198 Identities=25% Similarity=0.398 Sum_probs=141.2
Q ss_pred cEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccc
Q 001059 467 TYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKL 545 (1170)
Q Consensus 467 ~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~ 545 (1170)
..++.+|||++++|.+++.. ...+++.+++.++.||++||+|||++||+||||||+||||+..+.+|++|||++.....
T Consensus 53 ~~~~~~~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~ 132 (793)
T PLN00181 53 DSIVRALECEDVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGS 132 (793)
T ss_pred chhhhhhccCCccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccc
Confidence 45788899999999999975 34599999999999999999999999999999999999997655555555554432211
Q ss_pred cccc-----------------cC--CCCCCC-CCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhcC
Q 001059 546 EQLD-----------------QD--AAFPTD-TGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHP 605 (1170)
Q Consensus 546 ~~~~-----------------~~--~~~~~~-~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltP 605 (1170)
.... .. ...... ...........+||++|||||++.+ ..|+.++|||||||+||||++|
T Consensus 133 ~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~-~~~~~~sDVwSlGviL~ELl~~ 211 (793)
T PLN00181 133 DEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNG-SSSNCASDVYRLGVLLFELFCP 211 (793)
T ss_pred cccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhcc-CCCCchhhhhhHHHHHHHHhhC
Confidence 0000 00 000000 0000111233579999999999987 5689999999999999999997
Q ss_pred CCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 606 FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 606 f~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+.+..........+.. ...|+......+...+++.+||++||.+||++.++++|||+...
T Consensus 212 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~ 271 (793)
T PLN00181 212 VSSREEKSRTMSSLRH-RVLPPQILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP 271 (793)
T ss_pred CCchhhHHHHHHHHHH-hhcChhhhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence 7655443333332222 22333333345677899999999999999999999999999764
|
|
| >TIGR00408 proS_fam_I prolyl-tRNA synthetase, family I | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.8e-25 Score=267.77 Aligned_cols=328 Identities=9% Similarity=0.086 Sum_probs=227.8
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC---CCcccccceEEEeccC----CceeeecC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSH 781 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRP 781 (1170)
..++|+.+|+|.+..+++.|++.+++.++++||++|.||.| .+.. +.+.+.++||++.|.+ ++.++|||
T Consensus 25 ~~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~f~v~~~g~~~~~e~l~LrP 104 (472)
T TIGR00408 25 YPVKGCYVWLPYGFKIWKNIQKILRNILDEIGHEEVYFPMLIPESELAKEKDHIKGFEPEVYWITHGGLSKLDEPLALRP 104 (472)
T ss_pred cCCCceEEECcCHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhhcchhhhcchhcEEEecCCCCccCCcEEEeC
Confidence 45799999999999999999999999999999999999999 3332 2445688999999987 48999999
Q ss_pred CCCHHHHHHHH----hCCCCceeEEEecCeEEcCCCC----CCCCceeEeEEEEeCCCCcccHH---HHHHHHHHHHH-H
Q 001059 782 ELRLPFIRWAI----SNQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALTEA---EVLKVTMDIVT-R 849 (1170)
Q Consensus 782 D~T~~iaR~~~----~~~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l~-~ 849 (1170)
+.|++++.+++ +++..|+|+|++|+|||+|.++ .|.+||+|.+++.+-.....++. +++.+..+++. .
T Consensus 105 t~e~~i~~~~~~~i~S~rdLPlr~~q~~~vfR~E~~~~~gl~R~rEF~~~e~h~~~~~~e~a~~e~~~~l~~y~~i~~~~ 184 (472)
T TIGR00408 105 TSETAMYPMFKKWVKSYTDLPLKINQWVNVFRYETKHTRPFLRTREFTWQEAHTAHATAEEAEEQVLRALDIYKEFIENS 184 (472)
T ss_pred CCcHHHHHHHhccccChhhcCHHHhheeeeecCCCCCCCCcceeeeeehhhhhhhhCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999995544 4556799999999999998754 45668999999844333233333 55667777776 7
Q ss_pred cCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 001059 850 FFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 929 (1170)
Q Consensus 850 lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 929 (1170)
||++ +.+... ++ + ++
T Consensus 185 lglp--~~~~~~--------------~~-~-----------ek------------------------------------- 199 (472)
T TIGR00408 185 LAIP--YFVGRK--------------PE-W-----------EK------------------------------------- 199 (472)
T ss_pred cCCe--EEEEec--------------Cc-h-----------hh-------------------------------------
Confidence 7774 322110 00 0 00
Q ss_pred HHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceec
Q 001059 930 LRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLA 1009 (1170)
Q Consensus 930 ~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~ 1009 (1170)
+.|.. ..+.++..+.-|-..-.|++|..
T Consensus 200 --~~ga~--------------------------------~~~~~e~~~~dgr~~q~~t~~~L------------------ 227 (472)
T TIGR00408 200 --FAGAE--------------------------------YTWAFETIMPDGRTLQIATSHNL------------------ 227 (472)
T ss_pred --cCCcc--------------------------------ceEEEeEEEcCCCEEEEeeeecc------------------
Confidence 00000 00111110000111112233211
Q ss_pred cccccchhhhhcccccccccCCCCCCCCceEEeccH-HHHHhhcc------CCCCCCCCCCCceEEEEEc--CC---Ccc
Q 001059 1010 VGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLAL-ETIIQHYP------VDFKPVRNEAGTSVLVCSR--GG---GGL 1077 (1170)
Q Consensus 1010 ~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigl-erL~~~L~------~~~~~~~~~~~~~vlv~~~--~~---~~~ 1077 (1170)
|- ++.++|+-. +... ++.+....-+++|+ +|++.+|. .+...+...+|.+|+|+++ +. +..
T Consensus 228 -g~---~~sk~f~i~-y~~~--~g~~~~~h~~s~Gi~eRli~~lie~~~d~~gl~~P~~iaP~qV~Iipi~~~~~~~~~~ 300 (472)
T TIGR00408 228 -GQ---NFAKTFEIK-FETP--TGDKEYAYQTSYGISTRVIGALIAIHSDEKGLVLPPRVAPIQVVIIPIIFKKKENEKV 300 (472)
T ss_pred -cc---cccHhcCCE-EECC--CCCEEeeEEccccHHHHHHHHHHHHhCCCCceeeChhhCcceEEEEEccCCCCCCHHH
Confidence 00 112222210 0000 11122344467777 99988872 2223334467889999996 31 246
Q ss_pred HHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHH
Q 001059 1078 LVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLD 1157 (1170)
Q Consensus 1078 ~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~ 1157 (1170)
...|.++++.||+.|++|+++.. +.++++++++|+++|+|++|+||++|+++|+|+||++++++|..++++++++.+.+
T Consensus 301 ~~~A~~l~~~Lr~~girv~lD~r-~~s~gkk~k~Ae~~GvP~~IiIG~~Ele~~~V~ik~rdt~eq~~v~l~el~~~l~~ 379 (472)
T TIGR00408 301 MEAAREVRSRLKKAGFRVHIDDR-DNRPGRKFYQWEIKGIPLRIEVGPNDIEKNIAVISRRDTGEKYQVSLDQLEERVVE 379 (472)
T ss_pred HHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHCCCCEEEEECcchhhCCeEEEEECCCCceEEEEHHHHHHHHHH
Confidence 78999999999999999998876 46999999999999999999999999999999999999999999999999999988
Q ss_pred HHHhhccC
Q 001059 1158 AIASQFRN 1165 (1170)
Q Consensus 1158 ~l~~~~~~ 1165 (1170)
+++..++|
T Consensus 380 ~l~~~~~~ 387 (472)
T TIGR00408 380 LLNNIQEN 387 (472)
T ss_pred HHHHHHHH
Confidence 87766654
|
Prolyl-tRNA synthetase is a class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes tRNA synthetases for Gly, His, Ser, and Pro. The prolyl-tRNA synthetases are divided into two widely divergent families. This family includes the archaeal enzyme, the Pro-specific domain of a human multifunctional tRNA ligase, and the enzyme from the spirochete Borrelia burgdorferi. The other family includes enzymes from Escherichia coli, Bacillus subtilis, Synechocystis PCC6803, and one of the two prolyL-tRNA synthetases of Saccharomyces cerevisiae. |
| >PRK08661 prolyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-24 Score=261.47 Aligned_cols=327 Identities=12% Similarity=0.108 Sum_probs=228.2
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc---CCCcccccceEEEeccC----CceeeecCCC
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHG----GDLLELSHEL 783 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~----G~~laLRPD~ 783 (1170)
++|+.+|+|..+.+++.|++.+++.|.++||++|.||.| .+. ++.+.+.++||++++.+ ++.++|||+.
T Consensus 33 v~G~~~~~P~g~~i~~~i~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~~~h~~~f~~e~~~v~~~~~~~~~e~l~LrPts 112 (477)
T PRK08661 33 VKGCMVIKPYGYAIWENIQKILDKLFKETGHENVYFPLLIPESLLEKEKEHVEGFAPEVAWVTHGGGEKLEEKLALRPTS 112 (477)
T ss_pred CCceEEECccHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHhhhcCchhhcccccEEEEccCCCccCceEEEecCC
Confidence 689999999999999999999999999999999999999 332 23556689999999977 5689999998
Q ss_pred ----CHHHHHHHHhCCCCceeEEEecCeEEcCCCC---CCCCceeEeEEEEeCCCCcccHH---HHHHHHHHHH-HHcCC
Q 001059 784 ----RLPFIRWAISNQKSSFKRYEISSVYRRAIGH---SPPNRYLQGDFDIIGGASALTEA---EVLKVTMDIV-TRFFH 852 (1170)
Q Consensus 784 ----T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l-~~lgi 852 (1170)
|..++|++.+++..|+|+|++|+|||+|... .|.+||+|.+.+.+-.....++. +++.+..+++ +.||+
T Consensus 113 E~~i~~~~~~~i~SyrdLPlrl~q~~~vfR~E~~~rgl~R~rEF~~~E~h~~~~~~eea~~e~~~~l~~y~~i~~~~Lgl 192 (477)
T PRK08661 113 ETIIYPMYKKWIQSYRDLPLLYNQWVNVVRWETKTRPFLRTREFLWQEGHTAHATEEEAEEETLEMLEIYKEFFEDYLAI 192 (477)
T ss_pred cHHHHHHHHhhhcchhhcCHHHhcccceeeCCCCCCCcceeeeEEEcceeeeeCCHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8888898888888899999999999997653 35567999999976544334443 4556666666 66666
Q ss_pred CcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHh
Q 001059 853 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 932 (1170)
Q Consensus 853 ~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~ 932 (1170)
. +.+ +.. ++ + + ..
T Consensus 193 p--~~~--~~~------------~~-~-----------e---------------------------------------kf 205 (477)
T PRK08661 193 P--VII--GKK------------TE-W-----------E---------------------------------------KF 205 (477)
T ss_pred e--EEE--Eec------------Ch-H-----------H---------------------------------------hh
Confidence 4 221 110 00 0 0 00
Q ss_pred cCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccc
Q 001059 933 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1012 (1170)
Q Consensus 933 ~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GG 1012 (1170)
.|. ...+.+|..+..|...-.|++|..-.
T Consensus 206 ~ga--------------------------------~~~~~ie~~~~dgr~~q~gt~~~Lg~------------------- 234 (477)
T PRK08661 206 AGA--------------------------------DYTYTIEAMMPDGKALQAGTSHYLGQ------------------- 234 (477)
T ss_pred CCC--------------------------------cceeEEEEEeCCCCEEEEEEeccccc-------------------
Confidence 010 00111121111122222333332100
Q ss_pred ccchhhhhcccccccccCCCCCCCCceEEeccH-HHHHhhcc------CCCCCCCCCCCceEEEEEcC-----CCccHHH
Q 001059 1013 RYDYLLHRMWDREYVGYASRTNPPSGVGASLAL-ETIIQHYP------VDFKPVRNEAGTSVLVCSRG-----GGGLLVE 1080 (1170)
Q Consensus 1013 RYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigl-erL~~~L~------~~~~~~~~~~~~~vlv~~~~-----~~~~~~~ 1080 (1170)
++.++|+-. +...-|... ...=.++|+ +|++.+|. .+...+...+|.+|+|++.. .+.....
T Consensus 235 ---~~s~~f~i~-y~d~~g~~~--~v~~~s~G~~~R~i~alie~~~D~~Gl~lP~~iAP~qV~Iipi~~~~~~~~~~~~~ 308 (477)
T PRK08661 235 ---NFAKAFDIK-FQDKDGKLE--YVHQTSWGVSTRLIGALIMTHGDDKGLVLPPKIAPIQVVIVPIFKKEEKKEEVLEY 308 (477)
T ss_pred ---chhHhcCCE-EECCCCCEe--eeEEecccHHHHHHHHHHHHhCccCCCccCcccCCCeEEEEEecCCCcCCHHHHHH
Confidence 112222110 000111111 122224444 99988774 22233344568899999982 1456788
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1081 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1081 a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
|.++++.||+.|++|++++..+.++++++++|+++|+|++|+||++|+++|+|+|++++++++..++++++++.+...|+
T Consensus 309 a~~l~~~Lr~~GirV~lD~r~~~s~gkK~~~ae~~GvP~~IiIG~~ele~~~V~ik~rdtgek~~v~~~el~~~l~~~l~ 388 (477)
T PRK08661 309 AKELAEELKKAGIRVKLDDRSDKTPGWKFNEWELKGVPLRIEIGPRDLENNTVVLVRRDTLEKETVPLDELVEKVPELLE 388 (477)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECcchhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHH
Confidence 99999999999999998874478999999999999999999999999999999999999999999999999999988887
Q ss_pred hhccC
Q 001059 1161 SQFRN 1165 (1170)
Q Consensus 1161 ~~~~~ 1165 (1170)
..++|
T Consensus 389 ~~~~~ 393 (477)
T PRK08661 389 EIQEN 393 (477)
T ss_pred HHHHH
Confidence 66654
|
|
| >KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.8e-26 Score=241.64 Aligned_cols=245 Identities=22% Similarity=0.348 Sum_probs=187.9
Q ss_pred CCCCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEe
Q 001059 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWF 424 (1170)
Q Consensus 346 ~~~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~ 424 (1170)
..++.-.+.+.|.+.+.||+|.||.+.+|+|+.++..+|+|.++.... ...+|.+|+..--.| .|.||+.-|+.-+
T Consensus 15 ~el~kv~l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t---t~~dF~rEfhY~~~Ls~H~hIi~tY~vaF 91 (378)
T KOG1345|consen 15 EELKKVDLEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT---TQADFVREFHYSFFLSPHQHIIDTYEVAF 91 (378)
T ss_pred ccccccchhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh---hHHHHHHHhccceeeccchhhhHHHHHHh
Confidence 345556677899999999999999999999999999999999875433 467899998765455 5899987665433
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~ 503 (1170)
+ ...+++++||||| |+|..-+.. ..+-+....+++.|++
T Consensus 92 q---------------------------------------t~d~YvF~qE~aP~gdL~snv~~-~GigE~~~K~v~~ql~ 131 (378)
T KOG1345|consen 92 Q---------------------------------------TSDAYVFVQEFAPRGDLRSNVEA-AGIGEANTKKVFAQLL 131 (378)
T ss_pred h---------------------------------------cCceEEEeeccCccchhhhhcCc-ccccHHHHHHHHHHHH
Confidence 2 3468899999998 788887665 4588889999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecC--CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
+|+.|+|++++||||||.+||||-. ...+||||||+++..... -.....+..|.+||...
T Consensus 132 SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~t------------------V~~~~~~~~y~~pe~~~ 193 (378)
T KOG1345|consen 132 SAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTT------------------VKYLEYVNNYHAPELCD 193 (378)
T ss_pred HHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCce------------------ehhhhhhcccCCcHHHh
Confidence 9999999999999999999999943 357999999998854210 01123456789999754
Q ss_pred CC----CCCCccchhHHHHHHHHHhhc---CCCchhHHH-----HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 582 GW----PKIDEKADMYSLGIVFFELWH---PFSTAMERQ-----IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 582 ~~----~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~-----~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
.. -..++.+|+|.|||++|.++| ||....-+. ......+.....|..+...++.+..+.++-|.++|+
T Consensus 194 ~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P~~F~~fs~~a~r~Fkk~lt~~~~ 273 (378)
T KOG1345|consen 194 TVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALPKKFNPFSEKALRLFKKSLTPRFK 273 (378)
T ss_pred hccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCchhhcccCHHHHHHHHHhcCCccc
Confidence 32 225788999999999999998 665332211 111112223456777778889999999999999999
Q ss_pred CC
Q 001059 650 DR 651 (1170)
Q Consensus 650 ~R 651 (1170)
+|
T Consensus 274 dr 275 (378)
T KOG1345|consen 274 DR 275 (378)
T ss_pred cc
Confidence 99
|
|
| >KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.5e-25 Score=245.77 Aligned_cols=249 Identities=17% Similarity=0.215 Sum_probs=196.7
Q ss_pred CCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+++....+-+|.||.||.|.|+.. .+.|-+|.++ ...+.-....++.|-..|..+.|||+.++.+.+.+.
T Consensus 284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk-~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~--- 359 (563)
T KOG1024|consen 284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVK-QHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED--- 359 (563)
T ss_pred hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHH-hcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec---
Confidence 4567777899999999999988743 2346677765 334555567899999999999999999999888552
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------CCCCHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------DHFDKELAWHLFR 500 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------~~l~e~~~~~i~~ 500 (1170)
....++++.+.+ |+|..++..+ +.++..+...++.
T Consensus 360 ------------------------------------~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~mas 403 (563)
T KOG1024|consen 360 ------------------------------------YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMAS 403 (563)
T ss_pred ------------------------------------cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHH
Confidence 234467778887 7899988733 2367778889999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
|++.||+|||++|+||.||-.+|++|++...+||+|=.+++.+-+.++ .+-+.+......||+||.+
T Consensus 404 Qla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DY-------------hcLGDnEnRPvkWMslEal 470 (563)
T KOG1024|consen 404 QLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDY-------------HCLGDNENRPVKWMSLEAL 470 (563)
T ss_pred HHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccc-------------cccCCCCCCcccccCHHHH
Confidence 999999999999999999999999999999999999999987643221 1122233456689999999
Q ss_pred cCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 581 QGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 581 ~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+. ..|+.++|+|||||+||||+| |+..-++.+..... ..+.....+.+++.++..+|..||..+|++||+++|
T Consensus 471 ~n-~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~yl--kdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Q 547 (563)
T KOG1024|consen 471 QN-SHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYL--KDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQ 547 (563)
T ss_pred hh-hhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHH--hccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHH
Confidence 98 679999999999999999996 88766655443322 244444455678889999999999999999999999
Q ss_pred HHh
Q 001059 657 LLQ 659 (1170)
Q Consensus 657 iL~ 659 (1170)
+.+
T Consensus 548 lv~ 550 (563)
T KOG1024|consen 548 LVI 550 (563)
T ss_pred HHH
Confidence 875
|
|
| >smart00221 STYKc Protein kinase; unclassified specificity | Back alignment and domain information |
|---|
Probab=99.92 E-value=5.3e-24 Score=229.77 Aligned_cols=209 Identities=33% Similarity=0.571 Sum_probs=171.0
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|.+.+.||.|++|.||+|.+..+++.+|+|.+...... .....+.+|+..++.++|+|++++++++..
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~-~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~----------- 68 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE-KQREEFLREIRILKKLKHPNIVKLYGVFED----------- 68 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch-HHHHHHHHHHHHHHhCCCCChhhheeeeec-----------
Confidence 56788999999999999999988999999998754332 245688899999999999999999987632
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~-l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....++++||+++ +|.+++..... +++..++.++.+++.++.|||++++
T Consensus 69 -----------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i 119 (225)
T smart00221 69 -----------------------------PEPLYLVMEYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGI 119 (225)
T ss_pred -----------------------------CCceEEEEeccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence 3567899999986 99999987766 8999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+|+||+|.||+++.++.++|+|||++....... + .......++..|++||.+.+...++.++|+||
T Consensus 120 ~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~-----------~---~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~ 185 (225)
T smart00221 120 VHRDLKPENILLGMDGLVKLADFGLARFIHRDL-----------A---ALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWS 185 (225)
T ss_pred ecCCCCHHHEEEcCCCCEEEeeCceeeEecCcc-----------c---ccccceeccCCcCCHhHhcCCCCCCchhhHHH
Confidence 999999999999999999999999998653221 0 01133568889999999843356788999999
Q ss_pred HHHHHHHhhc---CCCc-hhHHHHHHHHhh
Q 001059 595 LGIVFFELWH---PFST-AMERQIVLSDLK 620 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~-~~~~~~~~~~l~ 620 (1170)
||+++|+|++ ||.. ........+.+.
T Consensus 186 lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~ 215 (225)
T smart00221 186 LGVILYELLWGPEPFSGEGEFTSLLSDVWS 215 (225)
T ss_pred HHHHHHHHHHCCCCccccchhHHHHHHHHh
Confidence 9999999996 7865 344444444443
|
Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. |
| >PLN02837 threonine-tRNA ligase | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.2e-23 Score=257.38 Aligned_cols=352 Identities=15% Similarity=0.132 Sum_probs=243.4
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
...|+..|+|..+.+++.+++.+++...++||++|.||.+ ...++.+...++||++.|..++.++||| +++|.
T Consensus 235 ~g~G~~~~~p~G~~l~~~L~~~~~~~~~~~G~~~v~tP~l~~~~l~~~sGh~~~~~~~mf~~~~~~~~~y~l~p-~~~p~ 313 (614)
T PLN02837 235 AGGGLVFWHPKGAIVRHIIEDSWKKMHFEHGYDLLYTPHVAKADLWKTSGHLDFYKENMYDQMDIEDELYQLRP-MNCPY 313 (614)
T ss_pred cCCcceEEechHHHHHHHHHHHHHHHHHHCCCEEEECCccCCHHHHhhcCCcccchhhcccccCCCCceEEECC-CCcHH
Confidence 4678999999999999999999999999999999999999 3345577889999999998889999999 55554
Q ss_pred -HHHHHh----CCCCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcc
Q 001059 788 -IRWAIS----NQKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 788 -aR~~~~----~~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~ 855 (1170)
+-++.. ++..|+|++++|+|||+|..+ -|.++|+|.+.++|..++...+ .+++.++.++++.||+..
T Consensus 314 ~~~~~~~~~~SyrdLPlr~~~~~~~~R~E~~g~~~GL~RvreF~~~e~h~f~~~~q~~~e~~~~l~~~~~~~~~lg~~~- 392 (614)
T PLN02837 314 HILVYKRKLHSYRDLPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRGVLDLTEEILKQFGFSK- 392 (614)
T ss_pred HHHHHhCccCChhHCCHhhEeecccccCCCCCCCcCcccccceEECeEEEEeCHHHHHHHHHHHHHHHHHHHHHcCCCe-
Confidence 444443 234699999999999998742 2566799999999988765322 378999999999999974
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.++.+. -+.+|-++.|...-+.+-.. +...++.-.....-.+
T Consensus 393 ~~~~~~t~~-----~~~~g~~~~w~~~~~~l~~~----------------------l~~~~~~~~~~~g~~a-------- 437 (614)
T PLN02837 393 YEINLSTRP-----EKSVGSDDIWEKATTALRDA----------------------LDDKGWEYKVDEGGGA-------- 437 (614)
T ss_pred EEEEecCCc-----hhccCCHHHHHHHHHHHHHH----------------------HHHcCCCceeCCCccc--------
Confidence 788888753 13455544443322211111 1111110000000000
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1015 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD 1015 (1170)
.+| .++.+-+...-|..+-.|++--.+. -+-|||
T Consensus 438 ----------------------------fyg--pkid~~~~d~~gr~~q~~tiqldf~----------------~~~~f~ 471 (614)
T PLN02837 438 ----------------------------FYG--PKIDLKIEDALGRKWQCSTIQVDFN----------------LPERFD 471 (614)
T ss_pred ----------------------------ccC--cceeeEeeccCCceeeecceeEeec----------------chhhcC
Confidence 011 1222222221233444444321110 122333
Q ss_pred hhhhhcccccccccCCCCCCCCce-EEec--cHHHHHhhccC---CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHH
Q 001059 1016 YLLHRMWDREYVGYASRTNPPSGV-GASL--ALETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1089 (1170)
Q Consensus 1016 ~L~~~fg~~~~~~~~g~~~~~pAv-Gfai--glerL~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR 1089 (1170)
-- | ...-|.+. .|-+ .-++ ++||++.+|.+ +..+ ...+|.+|+|++.+ +....+|.++++.||
T Consensus 472 l~---y-----~~~d~~~~-~pv~ih~~~~G~~eRlia~Lie~~~g~~P-~~laP~qV~IIpi~-~~~~~~A~~Ia~~Lr 540 (614)
T PLN02837 472 IT---Y-----VDSNSEKK-RPIMIHRAILGSLERFFGVLIEHYAGDFP-LWLAPVQARVLPVT-DNELEYCKEVVAKLK 540 (614)
T ss_pred cE---E-----ECCCCCcc-CCEEEEcCCccCHHHHHHHHHHHcCCCCC-CCCCCccEEEEEeC-hHHHHHHHHHHHHHH
Confidence 11 1 11122211 2222 2222 59999988753 3333 34578899999986 667899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1090 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1090 ~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+.|++|++ .. ++++++++++|++.|+|++|+||++|+++|+|+||++.++++..++++++++.|.+.+++
T Consensus 541 ~~GirVev-~~-~~slgkkir~A~~~gip~~IiIG~~E~e~~~VtVr~r~~geq~~v~~~el~~~l~~~~~~ 610 (614)
T PLN02837 541 AKGIRAEV-CH-GERLPKLIRNAETQKIPLMAVVGPKEVETRTLTVRSRHGGELGTMPVDDFINRIQLAVEN 610 (614)
T ss_pred HCCCEEEE-eC-CCCHHHHHHHHHHcCCCEEEEEcchhhhcCEEEEEECCCCceeEeeHHHHHHHHHHHHhh
Confidence 99999998 44 578999999999999999999999999999999999999999999999999999888764
|
|
| >KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.7e-25 Score=253.41 Aligned_cols=298 Identities=38% Similarity=0.672 Sum_probs=223.8
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+++.++|+....+|.|+||+|+.+..+.++..+|||.|..++.. ....+..+|+..+..+.|++|+++..+|.+....
T Consensus 44 ~sr~a~~~e~~~~~~~~g~~~~~~~~n~~d~~~~avkritlkn~e-~s~~rvl~~~~s~a~feh~g~~~~~ha~~~~~~~ 122 (516)
T KOG1033|consen 44 TSREANDFEPGQCLGRGGFGVVFSAQNKADENKYAVKRITLKNRE-ESRSRVLREVSSLAEFEHPGIKRYFHAWYERPPL 122 (516)
T ss_pred hhhhhccccccccccccCccccCCccccccchhhHHHHhcccchh-hhhhhhhccccchhhhcccchhhheeceecCCCC
Confidence 688999999999999999999999999988989999999876543 3456788999999999999999999999876541
Q ss_pred ccCCCC-C--CCCC------ccc---------------------------------c-----------------------
Q 001059 430 DFDGDS-M--WGSG------TLA---------------------------------S----------------------- 444 (1170)
Q Consensus 430 ~~~~~~-~--~~~g------~~~---------------------------------~----------------------- 444 (1170)
.+.... + ...+ .+. .
T Consensus 123 ~~qe~~d~~~l~~~~~~~~~~l~sl~~~~~~~~q~~~~~~~~~A~e~s~~~~~~~v~~~~~s~s~~~~~s~s~~~~~~~~ 202 (516)
T KOG1033|consen 123 GWQEEMDLKLLDDETSSERSNLPSLSERRTSKRQTAELPRVSAAAESSFHVFRAIVPVENQSHSQESSSSISQHNGSRSE 202 (516)
T ss_pred cccchhhhhhhhccCCcchhccccccchhccchhhhhcccccccchhhhccccccCchhhcccCcccccchhhcccchhh
Confidence 000000 0 0000 000 0
Q ss_pred ---cc------ccc-------------------------------cccccccc---------------------------
Q 001059 445 ---ST------FSN-------------------------------RAASSADV--------------------------- 457 (1170)
Q Consensus 445 ---~~------~~~-------------------------------~~~~~~~~--------------------------- 457 (1170)
.. |.. ...+...+
T Consensus 203 ~rk~s~~k~~~~~~~~~tdsd~~ed~~~~~~s~~~~~~~~~~s~~~~k~~~~~~~~~~~~~q~~~~~s~~E~~~s~~~~~ 282 (516)
T KOG1033|consen 203 FRKTSVSKASRFEGPDCTDSDLEEDEMQGSDSKESSRHEESGSSSISKSSERVSSGIVFEKQGKNNSSLREWLKSKRADV 282 (516)
T ss_pred hhhhhhccccccCCCccccccccccccccCcccCcccccccccccccccccccccCCchhhhhcccchhhhhccchhhhc
Confidence 00 000 00000000
Q ss_pred -------------------------------------ccccccccccEEEEEeeccC-CcHHHHHHhcC---CCCHHHHH
Q 001059 458 -------------------------------------TGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAW 496 (1170)
Q Consensus 458 -------------------------------------~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~ 496 (1170)
..........++||.|++|. .+|.+|+.... ..+.....
T Consensus 283 d~~~~~~~~~r~~~~l~~~~~~~~s~~~d~~~s~~~~~~~~~v~~~~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~ 362 (516)
T KOG1033|consen 283 DSLCACKYTFRQLGVLVDSSHSNRSILEDLRPSLFESSKRNKVGKKVYLYIQMNLCEKETLEDWLRRRRTGEERSLSLML 362 (516)
T ss_pred cchhhhhhhhhhhhheeccccCCcccccCCCCchhhhccccccccccchhhhhhhhhhhhHHHHhhCCCcccccchhHHH
Confidence 00000011347999999997 69999997543 36667888
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 497 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 497 ~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
.++.|++.|++| ++.+|||+||.||+...+..+||+|||+......... .......++..+||.+||+
T Consensus 363 ~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~~~~---------~~~~~a~~t~~~gt~~Yms 430 (516)
T KOG1033|consen 363 DIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDKDET---------VAPAAASHTQQVGTLLYMS 430 (516)
T ss_pred HHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheeecccCCc---------ccchhhhhhhcccccccCC
Confidence 999999999999 9999999999999999999999999999986532220 0111234677899999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
||++.+ ..|+.++||||||+||+|++++|....++...+..++ .+.+|+.+....|+...|+.+|+.+.|.+||++.+
T Consensus 431 PEQi~g-~~y~~kvdIyaLGlil~EL~~~f~T~~er~~t~~d~r-~g~ip~~~~~d~p~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 431 PEQIRG-QQYSEKVDIYALGLILAELLIQFSTQFERIATLTDIR-DGIIPPEFLQDYPEEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred HHHHhh-hhhhhhcchhhHHHHHHHHHHHhccHHHHHHhhhhhh-cCCCChHHhhcCcHHHHHHHHhcCCCcccCchHHH
Confidence 999998 6899999999999999999999999999988888877 67788766666678889999999999999997766
Q ss_pred HHhccC
Q 001059 657 LLQDAL 662 (1170)
Q Consensus 657 iL~~~~ 662 (1170)
.-.|.|
T Consensus 509 ~~~~~~ 514 (516)
T KOG1033|consen 509 VALHEF 514 (516)
T ss_pred Hhhhhh
Confidence 655554
|
|
| >PRK03991 threonyl-tRNA synthetase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=3.1e-22 Score=244.79 Aligned_cols=347 Identities=14% Similarity=0.097 Sum_probs=237.9
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|..-|+|..+.+++.|.+.+++.+.++||++|.||.+ ...++.+.+..+||.+. .+++.++|||.-+++..
T Consensus 216 ~~G~~~~~P~G~~i~~~L~~~~~~~~~~~G~~~V~tP~~~~~~~~~~sgh~~~f~e~my~v~-~~~e~l~Lrp~~c~~~~ 294 (613)
T PRK03991 216 DVGHMRYYPKGRLIRDLLEDYVYNLVVELGAMPVETPIMYDLSHPAIREHADKFGERQYRVK-SDKKDLMLRFAACFGQF 294 (613)
T ss_pred CeeeEEEEcHHHHHHHHHHHHHHHHHHHCCCEEEECCeecChhHHhhcccccccchhceEec-CCCceEEEecCCCHHHH
Confidence 468889999999999999999999999999999999998 33345677789999984 44689999997776766
Q ss_pred HHHHh----CCCCceeEEEecC-eEEcCCCCC-----CCCceeEeEEEEeCCC-CcccH--HHHHHHHHHHHHHcCCCcc
Q 001059 789 RWAIS----NQKSSFKRYEISS-VYRRAIGHS-----PPNRYLQGDFDIIGGA-SALTE--AEVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 789 R~~~~----~~~~P~r~~Y~g~-VfR~e~~~~-----~~~ef~Q~GvEiiG~~-~~~aD--aEvi~la~~~l~~lgi~~~ 855 (1170)
.+... ++..|+|+|++|+ +||+|.+.. |.|+|+|.++++|+.+ +...+ .+++.++.++++.||+.
T Consensus 295 ~~~~~~~~SyrdLPlr~~e~~~~~fR~E~~g~l~GL~RvReF~~~D~h~f~~~~eqa~~e~~~~l~~~~~i~~~lGl~-- 372 (613)
T PRK03991 295 LMLKDMTISYKNLPLKMYELSTYSFRLEQRGELVGLKRLRAFTMPDMHTLCKDMEQAMEEFEKQYEMILETGEDLGRD-- 372 (613)
T ss_pred HHHhCCcCchhhCChhhheecchheeCCCCCCCcCcccccceEeeeEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCC--
Confidence 55543 3356999999999 999987542 5567999999999985 33222 37799999999999995
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.++.. ..+.+. . .+.+..++... +
T Consensus 373 ~~~~~~~t---~df~~~---~---~~~l~~~l~~~-------------------------g------------------- 399 (613)
T PRK03991 373 YEVAIRFT---EDFYEE---N---KDWIVELVKRE-------------------------G------------------- 399 (613)
T ss_pred eEEEecCH---HHHhhh---H---HHHHHHHHHHc-------------------------C-------------------
Confidence 77777642 111110 0 01111111111 1
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEec-cCCCcccccccceecccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSV-KEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~-~~~~~~~~~~~~~I~~GGRY 1014 (1170)
..-.+.++. |...|-|.-+++... ..+. .-+.+++=-|+.|
T Consensus 400 -------------------------------~~~~~~~~~----g~~~~yg~kie~~~~d~~gr---~~q~~T~qld~~~ 441 (613)
T PRK03991 400 -------------------------------KPVLLEILP----ERKHYWVLKVEFAFIDSLGR---PIENPTVQIDVEN 441 (613)
T ss_pred -------------------------------CCEEecccC----CccccCcCcEEEEEeCCCCC---EEEEeeeecCccc
Confidence 100000011 111111222222211 1111 0001112223333
Q ss_pred chhhhhcccccccccCCCCCCCC-ceEEe-cc-HHHHHhhccC---CC-------CCCCCCCCceEEEEEcCCCccHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPS-GVGAS-LA-LETIIQHYPV---DF-------KPVRNEAGTSVLVCSRGGGGLLVER 1081 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~p-AvGfa-ig-lerL~~~L~~---~~-------~~~~~~~~~~vlv~~~~~~~~~~~a 1081 (1170)
.++|+-. +....|... .| -+|.+ +| ++|++.+|.+ +. ..+...+|.+|+|++.+ +.....|
T Consensus 442 ---~~~f~l~-y~d~~g~~~-~Pviih~~~~GsieR~i~aliE~~~~~~~~g~gl~~P~~lAP~qV~IIpi~-e~~~~~A 515 (613)
T PRK03991 442 ---AERFGIK-YVDENGEEK-YPIILHCSPTGSIERVIYALLEKAAKEEEEGKVPMLPTWLSPTQVRVIPVS-ERHLDYA 515 (613)
T ss_pred ---chhCCCE-EECCCCCEe-eCEEEEECCEeHHHHHHHHHHHHhCCccccCceeEcCccccCceEEEEEeC-HHHHHHH
Confidence 2344321 112223222 34 44654 55 9999887742 11 13344678999999996 7788999
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1082 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1082 ~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
.++++.||+.|++|++++. +.++++++++|++.|+|++|+||++|+++|+|+||++.++++..++++++++.+.+.+++
T Consensus 516 ~eIa~~Lr~~GirV~lDdr-~~slgkKir~A~~~GiP~iIVIG~kEle~g~VtVr~R~t~eq~~v~l~eli~~l~~~~~~ 594 (613)
T PRK03991 516 EEVADKLEAAGIRVDVDDR-DESLGKKIRDAGKEWIPYVVVIGDKEMESGKLTVTIREESEKVEMTLEELIERIKEETKG 594 (613)
T ss_pred HHHHHHHHhCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHhc
Confidence 9999999999999998876 679999999999999999999999999999999999999999999999999999888764
Q ss_pred h
Q 001059 1162 Q 1162 (1170)
Q Consensus 1162 ~ 1162 (1170)
.
T Consensus 595 ~ 595 (613)
T PRK03991 595 Y 595 (613)
T ss_pred C
Confidence 3
|
|
| >smart00750 KIND kinase non-catalytic C-lobe domain | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.3e-23 Score=218.02 Aligned_cols=157 Identities=25% Similarity=0.366 Sum_probs=121.3
Q ss_pred CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCC
Q 001059 478 RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 556 (1170)
Q Consensus 478 gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~ 556 (1170)
|+|.+++... ..+++.+++.++.||+.||+|||+++ ||+|||++.++.+|+ ||+++....
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~----------- 61 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTP----------- 61 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeecc-----------
Confidence 6788988864 45999999999999999999999999 999999999999999 999876421
Q ss_pred CCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh-cCCC-C---Cc
Q 001059 557 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ-KGEL-P---PS 628 (1170)
Q Consensus 557 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~-~~~~-p---~~ 628 (1170)
....||+.|||||++.+ ..|+.++|||||||++|||++ ||............+.. .... + +.
T Consensus 62 ---------~~~~g~~~y~aPE~~~~-~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (176)
T smart00750 62 ---------EQSRVDPYFMAPEVIQG-QSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSN 131 (176)
T ss_pred ---------ccCCCcccccChHHhcC-CCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccccc
Confidence 11268999999999987 568999999999999999997 77544332222222211 1111 1 11
Q ss_pred cccCCH--HHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 629 WVAKFS--EQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 629 ~~~~~~--e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
...... ++.++|.+||+.||.+||++.++++|+|.
T Consensus 132 ~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~ 168 (176)
T smart00750 132 LESVSAARSFADFMRVCASRLPQRREAANHYLAHCRA 168 (176)
T ss_pred HHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHH
Confidence 112222 58999999999999999999999999754
|
It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features |
| >PRK09188 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-22 Score=234.09 Aligned_cols=176 Identities=19% Similarity=0.115 Sum_probs=130.8
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCC---ChhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDK---SLPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~~---~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
.....++|.+.+.||+|+||+||+|+++. +|+.||||++..... .......+.+|+.+|+.++|+||++.+..+
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 34456889999999999999999999886 688889998753211 222345689999999999999998633211
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~ 504 (1170)
...|+|||||+| +|.. +.. .. ...++.|+++
T Consensus 91 -----------------------------------------~~~~LVmE~~~G~~L~~-~~~---~~---~~~~~~~i~~ 122 (365)
T PRK09188 91 -----------------------------------------GKDGLVRGWTEGVPLHL-ARP---HG---DPAWFRSAHR 122 (365)
T ss_pred -----------------------------------------CCcEEEEEccCCCCHHH-hCc---cc---hHHHHHHHHH
Confidence 125899999976 6652 211 11 1467899999
Q ss_pred HHHHHHhCCccccCC-CCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 505 GLAHIHGQGIIHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 505 gL~yLHs~gIiHrDL-Kp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
||.|||++||+|||| ||+|||++.++.+||+|||+|+.+.......... ...+-++.++++.|+|||.+..
T Consensus 123 aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~-------~~~d~~~~~~~~~~~~pe~~~~ 194 (365)
T PRK09188 123 ALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIA-------AYEDLRHLLKHKRTYAPDALTP 194 (365)
T ss_pred HHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhh-------hhhhhhhhhccCccCCcccCCh
Confidence 999999999999999 9999999999999999999999764321100000 0011246689999999998865
|
|
| >KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.86 E-value=3e-21 Score=208.98 Aligned_cols=261 Identities=20% Similarity=0.311 Sum_probs=194.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-.|.+.++||+|+||+.+.|.+..++++||||.-+.+.. ..++..|....+.| ..++|..+| +|=
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~----APQLrdEYr~YKlL~g~~GIP~vY-YFG--------- 93 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSE----APQLRDEYRTYKLLGGTEGIPQVY-YFG--------- 93 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccCC----cchHHHHHHHHHHHcCCCCCCcee-eec---------
Confidence 479999999999999999999999999999997654433 34577788888888 468888876 220
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
++..+-.+|||+++.||.+++.-++ +|+...+..++.|++.-++|+|++
T Consensus 94 ------------------------------qeG~~NiLVidLLGPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k 143 (449)
T KOG1165|consen 94 ------------------------------QEGKYNILVIDLLGPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEK 143 (449)
T ss_pred ------------------------------cccchhhhhhhhhCcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhc
Confidence 1244557999999999999998665 599999999999999999999999
Q ss_pred CccccCCCCCceeecCCC-----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 513 GIIHRDLTPNNIFFDARN-----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~-----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
.+|+|||||+|+||...+ .+.|+|||+|+.+..+...+...+ ..+.+..||.+||+--...| .+-+
T Consensus 144 ~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPY--------rE~KSLsGTARYMSINTHlG-rEQS 214 (449)
T KOG1165|consen 144 DLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPY--------REHKSLSGTARYMSINTHLG-REQS 214 (449)
T ss_pred ceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcc--------ccccccccceeeeEeecccc-chhh
Confidence 999999999999997543 489999999999887765554432 34677899999999998888 5678
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
...|+-|||.+++++|. ||.+..- .+...+ .--.+|-|.-+.|...
T Consensus 215 RRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeK----------------------------IGe~Kr~T~i~~Lc~g 266 (449)
T KOG1165|consen 215 RRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEK----------------------------IGETKRSTPIEVLCEG 266 (449)
T ss_pred hhhhHHHhhhhhhhhccCCCccccccCcchHHHHHH----------------------------hccccccCCHHHHHhc
Confidence 99999999999999884 7765422 111111 1234555555566655
Q ss_pred CCCCchHHHHHHHHHhcCCCCCccchhhhhccccc
Q 001059 662 LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFD 696 (1170)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 696 (1170)
|+.++...+.-...-.+...+|...+.+++.++++
T Consensus 267 ~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvld 301 (449)
T KOG1165|consen 267 FPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLD 301 (449)
T ss_pred CHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 55555443332222234455555556555555544
|
|
| >COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.9e-20 Score=208.63 Aligned_cols=253 Identities=30% Similarity=0.501 Sum_probs=193.5
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh-hHHHHHHHHHHHHhccCC-CceeEEEEEeecCccccCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~l~Hp-nIV~l~~~~~e~~~~~~~~~ 434 (1170)
|.+.+.||.|+||.||++.+. ..+++|.+........ ....+.+|+.+++.+.|+ +|+++++.+..
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~---~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~--------- 69 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR---KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQD--------- 69 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec---cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEec---------
Confidence 788899999999999999997 8899999976654433 567899999999999988 79999987722
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD---HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~---~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+++++|+.+ ++.+++.... .+....+..++.|++.++.|+|
T Consensus 70 -------------------------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H 118 (384)
T COG0515 70 -------------------------------EGSLYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH 118 (384)
T ss_pred -------------------------------CCEEEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 2237999999975 7776666654 7999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKID 587 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~ 587 (1170)
+.+++|||+||+||+++..+ .++++|||+++........... .......+||+.|+|||.+.+. ..+.
T Consensus 119 ~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~---------~~~~~~~~~t~~~~~pe~~~~~~~~~~~ 189 (384)
T COG0515 119 SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSI---------PALPSTSVGTPGYMAPEVLLGLSLAYAS 189 (384)
T ss_pred hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccc---------cccccccccccccCCHHHhcCCCCCCCC
Confidence 99999999999999999988 7999999999854322110000 0123567899999999999874 4688
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCC--CCCccccC-----CHHHHHHHHHccCCCCCCCCCH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGE--LPPSWVAK-----FSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~--~p~~~~~~-----~~e~~~LI~~~L~~dP~~RPta 654 (1170)
...|+||+|++++++++ ||..... .......+..... ........ ...+.+++.+|+..+|..|.+.
T Consensus 190 ~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~ 269 (384)
T COG0515 190 SSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSS 269 (384)
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCH
Confidence 99999999999999885 6554442 2222222222221 11111111 1467899999999999999999
Q ss_pred HHHHhcc
Q 001059 655 TELLQDA 661 (1170)
Q Consensus 655 ~eiL~~~ 661 (1170)
.+...+.
T Consensus 270 ~~~~~~~ 276 (384)
T COG0515 270 SSDLSHD 276 (384)
T ss_pred HHHhhch
Confidence 9988773
|
|
| >COG0441 ThrS Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.3e-20 Score=225.76 Aligned_cols=354 Identities=15% Similarity=0.163 Sum_probs=249.8
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
....|+..|+|..+.+++.+++.++.....+||++|.||.+ ..+++++.+.+.||.+... ++.++|||--++.
T Consensus 207 ~~~~G~~~~~pkG~~ir~~le~y~~~~~~~~Gy~~V~TP~~~~~~l~~~SGH~~~y~e~mf~~~~~-~~~~~lKpmNCpg 285 (589)
T COG0441 207 EEGPGLPFWHPKGATIRNLLEDYVRTKLRSYGYQEVKTPVLADLELWELSGHWDNYKEDMFLTESD-DREYALKPMNCPG 285 (589)
T ss_pred ccCCcceEECCCcccHHHHHHHHHHHHHHhcCceEecCCeeeecccchhccchhhccccceeeccC-ChhheeeeccCHh
Confidence 45689999999999999999999999999999999999999 3345567789999977554 4999999955554
Q ss_pred HHHHHHh----CCCCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcc
Q 001059 787 FIRWAIS----NQKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 787 iaR~~~~----~~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~ 855 (1170)
-+.++.+ ++..|+|++..|.|||+|..+ .|.|.|+|-+++||+..+...| .+++.++..+++.+|+++
T Consensus 286 h~~ifk~~~~SYR~LP~r~~E~g~v~R~E~SGal~GL~RvR~ftqdDaHifc~~dQi~~E~~~~~~~i~~v~~~fg~~~- 364 (589)
T COG0441 286 HILIFKSGLRSYRELPLRLAEFGYVYRYEKSGALHGLMRVRGFTQDDAHIFCTPDQIKDEFKGILELILEVYKDFGFTD- 364 (589)
T ss_pred HHHHHhcCCcceeccchhhhhcceeecccCcchhhccccccceeecccceeccHHHHHHHHHHHHHHHHHHHHhcCCce-
Confidence 4455544 334699999999999999765 2556699999999999776544 489999999999999984
Q ss_pred eEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCC
Q 001059 856 CDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGA 935 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~ 935 (1170)
+.+.++.+. +.+|.++.|-.+...+...++. .++.-...+.-. .+.|+
T Consensus 365 y~~~ls~r~------k~ig~d~~W~~a~~~l~~al~~----------------------~~~~~~~~~G~~----aFyGP 412 (589)
T COG0441 365 YEVKLSTRP------KFIGSDEMWDKAEAALREALKE----------------------IGVEYVEEPGEG----AFYGP 412 (589)
T ss_pred EEEEEecCC------cccCChhhhHHHHHHHHHHHHh----------------------hCceeeecCCce----EEECc
Confidence 999999876 4456665554433222222211 111000000000 11121
Q ss_pred hhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccc
Q 001059 936 ADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1015 (1170)
Q Consensus 936 ~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD 1015 (1170)
++.|-+...-|-..-.|+|.--|.. .-|+|
T Consensus 413 ----------------------------------Kid~~v~Dalgr~~q~~TIQlDf~l----------------peRF~ 442 (589)
T COG0441 413 ----------------------------------KIDFQVKDALGREWQLGTIQLDFNL----------------PERFD 442 (589)
T ss_pred ----------------------------------ccceEEEeccCcceecceEEEecCC----------------hhhce
Confidence 1211111111222334444322211 11222
Q ss_pred hhhhhcccccccccCC-CCCCCCceEEecc--HHHHHhhccC---CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHH
Q 001059 1016 YLLHRMWDREYVGYAS-RTNPPSGVGASLA--LETIIQHYPV---DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1089 (1170)
Q Consensus 1016 ~L~~~fg~~~~~~~~g-~~~~~pAvGfaig--lerL~~~L~~---~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR 1089 (1170)
-.- ++.-| .++|+ -+..|+. +||.+.+|.+ +..+. -.+|.+|.|++++ ++...+|.++++.|+
T Consensus 443 -------l~Y-v~~d~~~~~Pv-miHrai~GSiERfi~iLiE~~~G~~P~-WLaPvQv~VipV~-~~~~~ya~~v~~~L~ 511 (589)
T COG0441 443 -------LEY-VDEDGEKKRPV-IIHRAILGSIERFIGILLEHYAGALPT-WLAPVQVRVIPVA-DEHLDYAKEVAEKLR 511 (589)
T ss_pred -------EEE-EcCCCCccCCE-EEEeccchhHHHHHHHHHHhccCCCcc-cCCccEEEEEEeC-hHHHHHHHHHHHHHH
Confidence 100 11111 12222 4445544 8999888753 32332 3578999999997 677899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 001059 1090 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1090 ~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
+.|++|+++.. +.+++++++.|....+|+++++|++|.++++|++|...++++..+++++++..++...++.
T Consensus 512 ~~giRvdvD~~-~e~l~kKIR~a~~~kipyiiVvG~kE~e~~~v~vR~r~~~~~~~~~l~e~i~~ik~e~~~~ 583 (589)
T COG0441 512 KAGIRVDIDDR-NEKLGKKIREAGTQKIPYVIVVGDKEVETGTVVVRRRGGKQQKSMTLEELVEELKKEIEGR 583 (589)
T ss_pred HcCCeeeeccc-ccchHHHHHHHHhcCCCEEEEEchhhhccCceEEEEccCCccccccHHHHHHHHHHHhhcc
Confidence 99999998887 7799999999999999999999999999999999999999999999999999998887643
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.7e-22 Score=247.95 Aligned_cols=261 Identities=24% Similarity=0.346 Sum_probs=190.8
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecC---CCChh-hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK---DKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~---~~~~~-~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.....+|.|++|.|+.+......+.++.|....+ ..+.. ....+..|+-+-+.+.|||++.....+.+
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~-------- 392 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQE-------- 392 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhh--------
Confidence 3457899999999988888877777777765432 11211 22236678888888999999765433321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+-.||||+++|...+.....++..++..++.|++.|++|||+.|
T Consensus 393 --------------------------------~~~~~~~mE~~~~Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~G 440 (601)
T KOG0590|consen 393 --------------------------------IDGILQSMEYCPYDLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMG 440 (601)
T ss_pred --------------------------------cccchhhhhcccHHHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcC
Confidence 111223399999999999988888999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|.||||||+|+++..+|.+||+|||.+.....+. ........+.+|+..|+|||++.+...-....|||
T Consensus 441 iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~-----------e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiw 509 (601)
T KOG0590|consen 441 LAHRDLKLENLLVTENGILKIIDFGAASVFRYPW-----------EKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVW 509 (601)
T ss_pred ceeccCccccEEEecCCceEEeecCcceeeccCc-----------chhhhhhcCcccCCcCcCcccccccccCcchhhhh
Confidence 9999999999999999999999999998653221 11123345679999999999999854445679999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC------CCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG------ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~------~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|.||+++.|.+ ||................. .....+...+.+.+.+|.+||+.||.+|.|+++|++++|++
T Consensus 510 S~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~ 589 (601)
T KOG0590|consen 510 SCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIR 589 (601)
T ss_pred hccceEEEEecCCCccccccccccchhhhccccccccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhChHhh
Confidence 99999999986 6654332221100000000 01112233344678999999999999999999999999998
Q ss_pred CchHH
Q 001059 665 QMEYE 669 (1170)
Q Consensus 665 ~~~~~ 669 (1170)
.....
T Consensus 590 ~i~~c 594 (601)
T KOG0590|consen 590 SIECC 594 (601)
T ss_pred hcceE
Confidence 87543
|
|
| >KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.4e-20 Score=211.64 Aligned_cols=256 Identities=22% Similarity=0.275 Sum_probs=184.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCCChhhHHHHHHHHHHHHhccC----CCceeEEEEEeecCccc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDKSLPVNDRILREVATLSRLQH----QHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg-~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H----pnIV~l~~~~~e~~~~~ 430 (1170)
.|.+.+.||+|+||.||+|.+..++ ..+|+|.......... ..+..|..++..+.+ +++..+++...
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~--~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~------ 90 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP--SVLKIEIQVLKKLEKKNGPSHFPKLLDHGR------ 90 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC--ccchhHHHHHHHHhhhcCCCCCCEEEEecc------
Confidence 8999999999999999999998664 6789998765433211 157788999988873 57777775431
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+-||||+.++.+|.++.... +.|+...+..++.|++.+|++
T Consensus 91 ---------------------------------~~~~~~~iVM~l~G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~ 137 (322)
T KOG1164|consen 91 ---------------------------------STEDFNFIVMSLLGPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALED 137 (322)
T ss_pred ---------------------------------CCCceeEEEEeccCccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHH
Confidence 124567999999999999988544 579999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC-----CCEEEeecCcchhccccccccCCCCCCCCCCcccc-CcccccCccCCCcccccC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR-----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~-----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~l~~ 582 (1170)
||+.|++||||||+|+++... ..+.|.|||+|+............. .... .....||..|+++.+..+
T Consensus 138 lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~~~~~~~~------~~r~~~~~~rGT~ry~S~~~H~~ 211 (322)
T KOG1164|consen 138 LHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVGDSGGNLR------PPRPQKGLFRGTLRYASINVHLG 211 (322)
T ss_pred HHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccCCCCcccc------cCCCCccCCCCccccccHHHhCC
Confidence 999999999999999999865 4699999999994321110000000 0001 134569999999999998
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHH---HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMER---QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~---~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
...+.+.|+||++.++.||+. ||...... ........ ...........+.++.++...+-..+...+|....
T Consensus 212 -~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~ 289 (322)
T KOG1164|consen 212 -IEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR-KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEK 289 (322)
T ss_pred -CccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh-hhccccccCCChHHHHHHHHHhhccCCcCCCCHHH
Confidence 568999999999999999985 77543321 11111111 11111112223356777777777789999998888
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+...
T Consensus 290 ~~~~ 293 (322)
T KOG1164|consen 290 LAEL 293 (322)
T ss_pred HHHH
Confidence 7653
|
|
| >KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.6e-20 Score=193.88 Aligned_cols=258 Identities=21% Similarity=0.248 Sum_probs=190.7
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC-CCceeEEEEEeec
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFET 426 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H-pnIV~l~~~~~e~ 426 (1170)
++.-.....|.++++||.|+||.+|+|.+..+|..||||+-+.+.. ..++..|..+.+.|+| ..|..+..+.
T Consensus 8 ~~~~iv~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~----hpqL~yEskvY~iL~~g~GiP~i~~y~--- 80 (341)
T KOG1163|consen 8 LEELIVGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK----HPQLLYESKVYRILQGGVGIPHIRHYG--- 80 (341)
T ss_pred hhhheeccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC----CcchhHHHHHHHHhccCCCCchhhhhc---
Confidence 3344556899999999999999999999999999999998653322 2457789999999976 4455444332
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~g 505 (1170)
.+..+-.+||++.+.+|.+++.-+ ..|+..+++-++-|++.-
T Consensus 81 -------------------------------------~e~~ynvlVMdLLGPsLEdLfnfC~R~ftmkTvLMLaDQml~R 123 (341)
T KOG1163|consen 81 -------------------------------------TEKDYNVLVMDLLGPSLEDLFNFCSRRFTMKTVLMLADQMLSR 123 (341)
T ss_pred -------------------------------------cccccceeeeeccCccHHHHHHHHhhhhhHHhHHHHHHHHHHH
Confidence 134566899999999999998754 459999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
++|+|.+++|||||||+|+|..-+ ..+.|+|||+|+.+.......... ....+...||.+|++--+..+
T Consensus 124 iEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIp--------yre~r~ltGTaRYASinAh~g 195 (341)
T KOG1163|consen 124 IEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIP--------YREDRNLTGTARYASINAHLG 195 (341)
T ss_pred HHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCc--------cccCCccceeeeehhhhhhhh
Confidence 999999999999999999999654 458899999999876543322222 123456789999999988877
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCC--ccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~--~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
-..+...|+-|+|.+|..+.. ||.+... .+..-++...+-..|. -....+.++...+.-|-..-=.+-|..
T Consensus 196 -~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy 274 (341)
T KOG1163|consen 196 -IEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDY 274 (341)
T ss_pred -hhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcH
Confidence 456889999999988877763 8875533 2223333333333332 233455578888888877766677765
Q ss_pred HHHH
Q 001059 655 TELL 658 (1170)
Q Consensus 655 ~eiL 658 (1170)
.-+-
T Consensus 275 ~ylr 278 (341)
T KOG1163|consen 275 MYLR 278 (341)
T ss_pred HHHH
Confidence 5443
|
|
| >KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.84 E-value=4e-22 Score=233.40 Aligned_cols=241 Identities=28% Similarity=0.411 Sum_probs=196.9
Q ss_pred eeccCCcEEEEEEEE---ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCCCCC
Q 001059 362 PLGHGGFGHVVLCKN---KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~---~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~~~~ 437 (1170)
++|.|+||.|++++. ...|..||+|+.+..............|-.++..++ ||.+|+++.+|.
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafq------------- 67 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQ------------- 67 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeec-------------
Confidence 379999999997764 345788999998765433333334556777888886 999999997772
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccc
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiH 516 (1170)
....++++++|.. |.|...+.....+++.....+...++.+++++|+.+|+|
T Consensus 68 ---------------------------t~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiy 120 (612)
T KOG0603|consen 68 ---------------------------TDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAY 120 (612)
T ss_pred ---------------------------cccchhHhhhhcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHH
Confidence 3456789999985 588888888888999999999999999999999999999
Q ss_pred cCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHH
Q 001059 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596 (1170)
Q Consensus 517 rDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlG 596 (1170)
||+|++||+++.+|++++.|||+++..-.. +..|||..|||||++.+ ...++|+||||
T Consensus 121 rd~k~enilld~~Ghi~~tdfglske~v~~-------------------~~~cgt~eymApEI~~g---h~~a~D~ws~g 178 (612)
T KOG0603|consen 121 RDYKLENVLLLLEGHIKLTDFGLSKEAVKE-------------------KIACGTYEYRAPEIING---HLSAADWWSFG 178 (612)
T ss_pred hcccccceeecccCccccCCchhhhHhHhh-------------------hhcccchhhhhhHhhhc---cCCcccchhhh
Confidence 999999999999999999999999875322 22389999999999985 58899999999
Q ss_pred HHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccCCCCchH
Q 001059 597 IVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDALPPQMEY 668 (1170)
Q Consensus 597 viL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~~~~~~~ 668 (1170)
++++||++ ||.. +....+++.+...|.. .++.+++++..++..+|..|.. +.++++|+++.+..+
T Consensus 179 vl~felltg~~pf~~----~~~~~Il~~~~~~p~~---l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i~~ 251 (612)
T KOG0603|consen 179 VLAFELLTGTLPFGG----DTMKRILKAELEMPRE---LSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSIDW 251 (612)
T ss_pred hhHHHHhhCCCCCch----HHHHHHhhhccCCchh---hhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheeeeH
Confidence 99999997 8877 4444555545555543 4568999999999999999974 578999999999987
Q ss_pred HHH
Q 001059 669 ELL 671 (1170)
Q Consensus 669 ~~~ 671 (1170)
.-+
T Consensus 252 ~~l 254 (612)
T KOG0603|consen 252 NEL 254 (612)
T ss_pred hhH
Confidence 744
|
|
| >KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=7e-21 Score=231.39 Aligned_cols=272 Identities=21% Similarity=0.281 Sum_probs=195.1
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+|...+.||++.|=+|.+|++. .|. |+||++-+.. .+.+...+.++|++ .+.++|||.+++.-.-
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~-eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~---------- 90 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDR-EGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVL---------- 90 (1431)
T ss_pred ceeeecccCchhhhhhhhccCC-Cce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHH----------
Confidence 6778899999999999999987 344 9999986554 23334445556666 6667999999875221
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......|+|-+|.-.+|++.+..+.-+..-+.+.|+.||+.||..+|..|
T Consensus 91 ------------------------------~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~g 140 (1431)
T KOG1240|consen 91 ------------------------------VTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLG 140 (1431)
T ss_pred ------------------------------HhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 23456689999999999999998888888899999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCcccc-CcccccCccCCCcccccCC---------
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD-GTGQVGTYFYTAPEIEQGW--------- 583 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~GT~~Y~APE~l~~~--------- 583 (1170)
|+|+|||.+||||+.-+.+.|+||..-+....+. .+++++.+- .|+. .-.+|.|||.+...
T Consensus 141 VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe--------DNPadf~fFFDTSr-RRtCYiAPERFv~~~~~~~~~q~ 211 (1431)
T KOG1240|consen 141 VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE--------DNPADFTFFFDTSR-RRTCYIAPERFVSALGKTSVGQD 211 (1431)
T ss_pred ccccccccceEEEeeechhhhhcccccCCccCCC--------CCcccceEEEecCC-ceeeecChHhhhccccccccCCc
Confidence 9999999999999999999999998765322111 112233221 2222 33469999976431
Q ss_pred -CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcccc--CCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 584 -PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVA--KFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 584 -~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~--~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+..+++.||||+||++.||++ |......- ..-.......+..... ....++++|..|++.||++|.+|++.
T Consensus 212 ~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL---~aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedy 288 (1431)
T KOG1240|consen 212 APLLTPAMDIFSAGCVIAELFLEGRPLFTLSQL---LAYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDY 288 (1431)
T ss_pred ccccChhhhhhhhhHHHHHHHhcCCCcccHHHH---HhHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHH
Confidence 125789999999999999996 33222221 1111111111110000 01267899999999999999999999
Q ss_pred Hhc---cCCCCchHHHHHHHHHhcCCCC
Q 001059 658 LQD---ALPPQMEYELLDNILRMMHSSE 682 (1170)
Q Consensus 658 L~~---~~~~~~~~~~~~~~~~~~~~~~ 682 (1170)
|+. .+|+...+.++..++..+-+..
T Consensus 289 L~~yrG~~FP~yFy~FL~~Y~~~~~~~~ 316 (1431)
T KOG1240|consen 289 LQKYRGLVFPEYFYSFLYDYLDRFVPLT 316 (1431)
T ss_pred HHhhhccccHHHHHHHHHHHHHhcCCcc
Confidence 987 4788888888888877665443
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.4e-20 Score=229.20 Aligned_cols=237 Identities=24% Similarity=0.379 Sum_probs=175.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-.+|+.++.|-.|+||-||.++|+.+.+.+|+| ++..+. +.|- +|.....|.+|
T Consensus 82 e~df~~IklisngAygavylvrh~~trqrfa~k-iNkq~l-------ilRn--ilt~a~npfvv---------------- 135 (1205)
T KOG0606|consen 82 ESDFNTIKLISNGAYGAVYLVRHKETRQRFAMK-INKQNL-------ILRN--ILTFAGNPFVV---------------- 135 (1205)
T ss_pred ccccceeEeeccCCCCceeeeeccccccchhhc-ccccch-------hhhc--cccccCCccee----------------
Confidence 369999999999999999999999999999994 432211 1111 11111222222
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
|+-...+...+.++.. ++.+++|||+.|
T Consensus 136 --------------------------------------------gDc~tllk~~g~lPvd--------mvla~Eylh~yg 163 (1205)
T KOG0606|consen 136 --------------------------------------------GDCATLLKNIGPLPVD--------MVLAVEYLHSYG 163 (1205)
T ss_pred --------------------------------------------chhhhhcccCCCCcch--------hhHHhHhhccCC
Confidence 2333333333334332 288999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+|||+||+|.+|+.-|++|+.|||+++............-........+.....+|||.|.|||++.. +.|+..+|||
T Consensus 164 ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilr-qgygkpvdww 242 (1205)
T KOG0606|consen 164 IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILR-QGYGKPVDWW 242 (1205)
T ss_pred eecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhhhhh-hccCCCccHH
Confidence 999999999999999999999999999864322211110000001111223455699999999999887 4699999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC---CHHHHHhccCCCCch
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP---SATELLQDALPPQME 667 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP---ta~eiL~~~~~~~~~ 667 (1170)
++|+|+||++- ||.+..+++.+-..+......|..-....++++++|.++|..+|..|. .+-++.+|.||..+.
T Consensus 243 amGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga~evk~h~ff~~LD 322 (1205)
T KOG0606|consen 243 AMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEALPPEAQDLIEQLLRQNPLCRLGTGGALEVKQHGFFQLLD 322 (1205)
T ss_pred HHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcCCCHHHHHHHHHHHHhChHhhcccchhhhhhhccceeecc
Confidence 99999999984 999998888887777777778877777788999999999999999995 678889999999998
Q ss_pred HH
Q 001059 668 YE 669 (1170)
Q Consensus 668 ~~ 669 (1170)
|.
T Consensus 323 w~ 324 (1205)
T KOG0606|consen 323 WK 324 (1205)
T ss_pred cc
Confidence 76
|
|
| >cd00670 Gly_His_Pro_Ser_Thr_tRS_core Gly_His_Pro_Ser_Thr_tRNA synthetase class II core domain | Back alignment and domain information |
|---|
Probab=99.82 E-value=4.9e-20 Score=202.89 Aligned_cols=138 Identities=9% Similarity=0.135 Sum_probs=120.2
Q ss_pred hhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccC----CceeeecCCCCHHHHHHHHhC-
Q 001059 726 TELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHG----GDLLELSHELRLPFIRWAISN- 794 (1170)
Q Consensus 726 ~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~----G~~laLRPD~T~~iaR~~~~~- 794 (1170)
+.+++.|++.+++.|.++||++|.||+| .+.. +++...++||+|.|.+ |+.++||||.|+|++|+++.+
T Consensus 2 ~~~~~~l~~~~~~~~~~~G~~ei~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~LrP~~~~~i~~~~~~~~ 81 (235)
T cd00670 2 TALWRALERFLDDRMAEYGYQEILFPFLAPTVLFFKGGHLDGYRKEMYTFEDKGRELRDTDLVLRPAACEPIYQIFSGEI 81 (235)
T ss_pred HHHHHHHHHHHHHHHHHcCCEEEECCeEcCHHHHhhcCCcccchhhcCeeccCcccccCCeEEEecCCCHHHHHHHhccC
Confidence 5678899999999999999999999999 2222 2577789999999998 899999999999999998874
Q ss_pred ---CCCceeEEEecCeEEcCCCC----CCCCceeEeEEEEeCCC--CcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHH
Q 001059 795 ---QKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDL 865 (1170)
Q Consensus 795 ---~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~--~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~i 865 (1170)
...|+|+||+|+|||+|.++ .|.+||+|+|+|+||.+ +..+++|++.++.++++.||+. +++.+++.+.
T Consensus 82 ~~~~~lP~r~~~~g~~fR~E~~~~~gl~R~reF~q~e~~~~~~~~~~~~~~~e~~~~~~~~l~~lgl~--~~i~~~~~~~ 159 (235)
T cd00670 82 LSYRALPLRLDQIGPCFRHEPSGRRGLMRVREFRQVEYVVFGEPEEAEEERREWLELAEEIARELGLP--VRVVVADDPF 159 (235)
T ss_pred ccchhcCeeeeeecccccCCCCCCCCChhheeeeeceEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCc--EEEEEccChh
Confidence 24699999999999998766 24567999999999998 6789999999999999999984 9999998543
|
This domain is the core catalytic domain of tRNA synthetases of the subgroup containing glycyl, histidyl, prolyl, seryl and threonyl tRNA synthetases. It is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. These enzymes belong to class II aminoacyl-tRNA synthetases (aaRS) based upon their structure and the presence of three characteristic sequence motifs in the core domain. This domain is also found at the C-terminus of eukaryotic GCN2 protein kinase and at the N-terminus of the ATP phosphoribosyltransferase accessory subunit, HisZ and the accessory subunit of mitochondrial polymerase gamma (Pol gamma b) . Most class II tRNA synthetases are dimers, with this subgroup consisting of mostly homodimers. These enzymes attach a specific amino acid to the 3' OH group of ribose of the appropriate tRNA. |
| >KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-20 Score=204.07 Aligned_cols=281 Identities=23% Similarity=0.277 Sum_probs=185.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCc-----------------------------------EEEEEEEecCC---
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGR-----------------------------------HYAVKKIRLKD--- 392 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~-----------------------------------~vAVK~i~~~~--- 392 (1170)
.-.+++|++...||+|....||.|+...+|. +.|||.+-.-+
T Consensus 153 kFtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s 232 (598)
T KOG4158|consen 153 KFTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDS 232 (598)
T ss_pred ccchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCC
Confidence 3447899999999999999999998764321 24566542111
Q ss_pred CChhhHHHHHHHHH------HH--------Hh--------ccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccc
Q 001059 393 KSLPVNDRILREVA------TL--------SR--------LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNR 450 (1170)
Q Consensus 393 ~~~~~~~~~~~Ev~------iL--------~~--------l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~ 450 (1170)
.+....+.+.+|.- .+ +. -.|||||++.++|.+.... +-.+.+.+.....
T Consensus 233 ~~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~-------lPda~~~YPdalp- 304 (598)
T KOG4158|consen 233 GDAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKV-------LPDAIERYPDALP- 304 (598)
T ss_pred chHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhcc-------CCchhhhCccccc-
Confidence 12222333333321 11 11 2699999999998764311 1111111111111
Q ss_pred cccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeec--C
Q 001059 451 AASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD--A 528 (1170)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~--~ 528 (1170)
. .+ ..........+|+||.-.+.+|.+++-.+. .+.....-++.|+++|+.|||.+||.|||||++|||+. +
T Consensus 305 ~----R~-~p~g~g~~~tlylvMkrY~~tLr~yl~~~~-~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~Eldd 378 (598)
T KOG4158|consen 305 A----RW-YPSGAGEPKTLYLVMKRYRQTLREYLWTRH-RSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDD 378 (598)
T ss_pred c----ee-cccccCCCceEEEehhcchhhHHHHHhcCC-CchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecC
Confidence 0 00 112233567899999999999999987654 55667778899999999999999999999999999994 3
Q ss_pred CC--CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC-----CCccchhHHHHHHHHH
Q 001059 529 RN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-----IDEKADMYSLGIVFFE 601 (1170)
Q Consensus 529 ~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~-----~~~ksDIwSlGviL~E 601 (1170)
|+ .+.|+|||.+---.... .+ .|. .......-|...-||||+....+. .-.|+|.|+.|.+.||
T Consensus 379 D~~P~LVvaDFGCcLAd~~hG-lq---lpy-----~S~~Vd~GGNa~lmAPEi~ta~PGp~avvny~kAD~WA~GalaYE 449 (598)
T KOG4158|consen 379 DEIPQLVVADFGCCLADDNHG-LQ---LPY-----ESDEVDLGGNAKLMAPEIATAVPGPNAVVNYEKADTWAAGALAYE 449 (598)
T ss_pred CCCcEEEEcccceeeeccccc-cc---ccc-----ccccccCCCcceecchhhhhcCCCCceeeccchhhhhhhhhhHHH
Confidence 33 48899999875322111 11 111 111233468888999998765332 2358999999999999
Q ss_pred hhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 602 LWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 602 Llt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
++. ||+...++...... .+..++|.-...++|.+++++..+|+.||++|+++.
T Consensus 450 Ifg~~NPFY~rGem~L~~r~-Yqe~qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~ 505 (598)
T KOG4158|consen 450 IFGRSNPFYKRGEMLLDTRT-YQESQLPALPSRVPPVARQLVFDLLKRDPSKRVSPN 505 (598)
T ss_pred HhccCCcccccchheechhh-hhhhhCCCCcccCChHHHHHHHHHhcCCccccCCcc
Confidence 996 99874433222222 224556777778889999999999999999999854
|
|
| >cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.3e-20 Score=194.82 Aligned_cols=140 Identities=14% Similarity=0.119 Sum_probs=108.0
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhh------------------------HHHHHHHHHHHHhccCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV------------------------NDRILREVATLSRLQHQH 415 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~------------------------~~~~~~Ev~iL~~l~Hpn 415 (1170)
...||+|+||.||+|.+. +|+.||||+++....+... .....+|+..|..+.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05147 2 NGCISTGKEANVYHATTA-NGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAG 80 (190)
T ss_pred CCccccccceEEEEEECC-CCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 357999999999999997 8999999999754321111 112345999999998887
Q ss_pred ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHH
Q 001059 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKEL 494 (1170)
Q Consensus 416 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~ 494 (1170)
+....... ....+|||||++| ++.........++...
T Consensus 81 v~~p~~~~------------------------------------------~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~ 118 (190)
T cd05147 81 IPCPEPIL------------------------------------------LKSHVLVMEFIGDDGWAAPRLKDAPLSESK 118 (190)
T ss_pred CCCCcEEE------------------------------------------ecCCEEEEEEeCCCCCcchhhhcCCCCHHH
Confidence 64322110 0112799999986 4444434456799999
Q ss_pred HHHHHHHHHHHHHHH-HhCCccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 495 AWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 495 ~~~i~~qI~~gL~yL-Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
+..++.|++.+|.|+ |+.||+||||||+|||++ ++.++|+|||+|...
T Consensus 119 ~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~LiDFG~a~~~ 167 (190)
T cd05147 119 ARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYIIDVSQSVEH 167 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEEEEccccccC
Confidence 999999999999999 799999999999999998 578999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c |
| >cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.3e-19 Score=188.34 Aligned_cols=141 Identities=23% Similarity=0.205 Sum_probs=110.4
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------------------------hHHHHHHHHHHHHhccCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------------------------VNDRILREVATLSRLQHQH 415 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------------------------~~~~~~~Ev~iL~~l~Hpn 415 (1170)
.+.||+|+||+||+|.+. +|+.||||+++....... ....+.+|+..+.++.|++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~-~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 80 (190)
T cd05145 2 NGCISTGKEANVYHARTG-DGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAG 80 (190)
T ss_pred CceeecCCCcEEEEEEcC-CCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 468999999999999988 999999999986432110 0123457999999999998
Q ss_pred ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCc-HHHHHHhcCCCCHHH
Q 001059 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-LRQVFESYDHFDKEL 494 (1170)
Q Consensus 416 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gs-L~~~l~~~~~l~e~~ 494 (1170)
|.....++. ...|+||||++|. +.........++...
T Consensus 81 i~~p~~~~~------------------------------------------~~~~lVmE~~~g~~~~~~~l~~~~~~~~~ 118 (190)
T cd05145 81 VPVPEPILL------------------------------------------KKNVLVMEFIGDDGSPAPRLKDVPLEEEE 118 (190)
T ss_pred CCCceEEEe------------------------------------------cCCEEEEEEecCCCchhhhhhhccCCHHH
Confidence 754332220 0137999999863 433323345688899
Q ss_pred HHHHHHHHHHHHHHHHh-CCccccCCCCCceeecCCCCEEEeecCcchhcc
Q 001059 495 AWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 544 (1170)
Q Consensus 495 ~~~i~~qI~~gL~yLHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~ 544 (1170)
+..++.|++.+|.++|+ +||+||||||+|||++ ++.++|+|||+|+...
T Consensus 119 ~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 119 AEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYIIDVSQAVELD 168 (190)
T ss_pred HHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEEEEcccceecC
Confidence 99999999999999999 9999999999999998 8999999999998653
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro |
| >cd00771 ThrRS_core Threonyl-tRNA synthetase (ThrRS) class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.78 E-value=9.5e-19 Score=198.88 Aligned_cols=149 Identities=13% Similarity=0.113 Sum_probs=128.4
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|+.+|+|.++.+++.|++.+++++.++||++|.||.| .+. ++.+...++||++. .+|+.++|||+.|+++
T Consensus 18 ~~~G~~~~~p~g~~l~~~l~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sg~~~~~~~~my~~~-~~~~~l~LRP~~~~~~ 96 (298)
T cd00771 18 AGPGLPFWLPKGAIIRNELEDFLRELQRKRGYQEVETPIIYNKELWETSGHWDHYRENMFPFE-EEDEEYGLKPMNCPGH 96 (298)
T ss_pred CCCcceEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCeecCHHHHhhCCCccccccCceEec-cCCceEEEcccCCHHH
Confidence 5789999999999999999999999999999999999999 332 23456789999994 4678999999999999
Q ss_pred HHHHHhC----CCCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCc-ccHH-HHHHHHHHHHHHcCCCcce
Q 001059 788 IRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASA-LTEA-EVLKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~----~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~-~aDa-Evi~la~~~l~~lgi~~~~ 856 (1170)
+|+++.. ...|+|+||+|+|||+|.++ .|.+||+|+|+|+||.++. .+++ |+|.++.++++.||+.. +
T Consensus 97 ~~~~~~~~~s~~~LPlr~~~~g~vfR~E~~~~~~Gl~R~reF~q~e~~i~~~~e~~~~e~~e~l~~~~~~l~~lgl~~-~ 175 (298)
T cd00771 97 CLIFKSKPRSYRDLPLRLAEFGTVHRYEQSGALHGLTRVRGFTQDDAHIFCTPDQIKEEIKGVLDLIKEVYSDFGFFD-Y 175 (298)
T ss_pred HHHHHhhccchhhCCeEEEEecCcccCCCCCCCCCccccccEEECCEEEEeCCcchHHHHHHHHHHHHHHHHHcCCCc-E
Confidence 9988863 34699999999999998775 3667899999999988755 3343 79999999999999985 9
Q ss_pred EEEeCcHH
Q 001059 857 DIHLNHGD 864 (1170)
Q Consensus 857 ~i~lg~~~ 864 (1170)
.|.++++.
T Consensus 176 ~i~l~~~~ 183 (298)
T cd00771 176 KVELSTRP 183 (298)
T ss_pred EEEEEcCh
Confidence 99999986
|
ThrRS is a homodimer. It is responsible for the attachment of threonine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. |
| >PRK10359 lipopolysaccharide core biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.7e-19 Score=189.89 Aligned_cols=179 Identities=13% Similarity=0.155 Sum_probs=130.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh-hHHH------HHHHHHHHHhccCCCceeEEEEEeec
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDR------ILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~-~~~~------~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
.++|++++.||.|+||.||++.. ++..+|||+++......+ .... +.+|+..+.++.||+|.....++...
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~--~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDT--DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hCceEEEEEecCCCceEEEEEec--CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 46899999999999999999655 477899999975443222 1122 57899999999999999988776432
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
... ........+++|||++| +|.++.. +++ ....+|+.+
T Consensus 108 ~~~--------------------------------~~~~~~~~~lvmEyi~G~tL~~~~~----~~~----~~~~~i~~~ 147 (232)
T PRK10359 108 ERK--------------------------------TLRYAHTYIMLIEYIEGVELNDMPE----ISE----DVKAKIKAS 147 (232)
T ss_pred ccc--------------------------------cccccCCeEEEEEEECCccHHHhhh----ccH----HHHHHHHHH
Confidence 100 00113457899999987 7877632 333 245699999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|..||+.|++|||+||+||+++.++ ++|+|||.+....... ....++.. ..
T Consensus 148 l~~lH~~gi~H~Dikp~Nili~~~g-i~liDfg~~~~~~e~~---------------------------a~d~~vle-r~ 198 (232)
T PRK10359 148 IESLHQHGMVSGDPHKGNFIVSKNG-LRIIDLSGKRCTAQRK---------------------------AKDRIDLE-RH 198 (232)
T ss_pred HHHHHHcCCccCCCChHHEEEeCCC-EEEEECCCcccccchh---------------------------hHHHHHHH-hH
Confidence 9999999999999999999999888 9999999887532111 00012222 34
Q ss_pred CCccchhHHHHHHHHHhh
Q 001059 586 IDEKADMYSLGIVFFELW 603 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELl 603 (1170)
|+.++|+||||+++.-+.
T Consensus 199 y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 199 YGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred hcccccccceeEeehHHH
Confidence 678999999999877653
|
|
| >KOG4018 consensus Uncharacterized conserved protein, contains RWD domain [Function unknown] | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.6e-20 Score=187.54 Aligned_cols=104 Identities=26% Similarity=0.356 Sum_probs=92.1
Q ss_pred CCCCCcc-EEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhhCCCC
Q 001059 2 GYEDLDV-SALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLG 80 (1170)
Q Consensus 2 ~~~~~~~-~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~~~~~ 80 (1170)
++++++. ++.|.|++|++|||+||++++...+|+.+.++..+++.|+.+|++|| ||+|||||||++||||++++.++
T Consensus 42 ~e~d~~~~~~~l~~s~tEnYPDe~Pli~~~~~~~~~~~~i~~i~~~l~~~aeenL--GmaMiftLvss~ke~l~e~~~q~ 119 (215)
T KOG4018|consen 42 GENDEPKGSFILVFSLTENYPDEAPLIEAFENENLEDAEIEGILEKLQQEAEENL--GMAMIFTLVSSAKEELNEIVEQQ 119 (215)
T ss_pred ccCCCccccEEEEEEccCCCCCCCcceeccccccccHHHHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHHHHHH
Confidence 3456666 99999999999999999999999999999999999999999999999 99999999999999999999988
Q ss_pred CCCCCCCCccccccccccccchhhcccccccCCceE
Q 001059 81 QSNESVPGLVTESSSQSFEGSAVSASKSCSSKVPFV 116 (1170)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (1170)
..+ +....+..++++.|+..|||+|.-
T Consensus 120 ~~~---------e~~e~~~~~~ee~e~~kfhgt~VT 146 (215)
T KOG4018|consen 120 KAA---------EQREQEAREAEEEERKKFHGTPVT 146 (215)
T ss_pred HHH---------HHHHHHHHHHHHHhhccccCCcee
Confidence 765 333344556778889999999853
|
|
| >cd00779 ProRS_core_prok Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.77 E-value=2.4e-19 Score=199.24 Aligned_cols=158 Identities=11% Similarity=0.100 Sum_probs=133.8
Q ss_pred cccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccCCceee
Q 001059 705 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLE 778 (1170)
Q Consensus 705 ~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~la 778 (1170)
.++... ..++|+.||+|.++.+++.|++.+++.|.++||++|.||+| .+.. +.+...++||+|.|.+|+.++
T Consensus 12 ~ag~~~--~~~~G~~~~lP~g~~l~~~i~~~~~~~~~~~G~~ei~~P~l~~~~~~~~sg~~~~~~~emy~~~d~~~~~l~ 89 (255)
T cd00779 12 RAGFIR--QTSSGLYSWLPLGLRVLKKIENIIREEMNKIGAQEILMPILQPAELWKESGRWDAYGPELLRLKDRHGKEFL 89 (255)
T ss_pred HcCCcc--cCCCceEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCccCCHHHHHhcCCccccCcccEEEecCCCCeEE
Confidence 344443 46899999999999999999999999999999999999999 3332 344678999999999999999
Q ss_pred ecCC----CCHHHHHHHHhCCCCceeEEEecCeEEcC-CCCCC---CCceeEeEEEEeCCCCcccHH---HHHHHHHHHH
Q 001059 779 LSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGHSP---PNRYLQGDFDIIGGASALTEA---EVLKVTMDIV 847 (1170)
Q Consensus 779 LRPD----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e-~~~~~---~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l 847 (1170)
|||+ +|..++|.+.+++..|+|+||+|+|||+| +|+.| .+||+|+|+++||.+...+|+ |++.++.+++
T Consensus 90 LrPt~e~~~t~~~~~~i~s~~~LPlr~~~~~~~FR~E~~~~~Gl~R~reF~q~e~~~~~~~~~~a~~~~~~i~~~~~~il 169 (255)
T cd00779 90 LGPTHEEVITDLVANEIKSYKQLPLNLYQIQTKFRDEIRPRFGLMRGREFLMKDAYSFDIDEESLEETYEKMYQAYSRIF 169 (255)
T ss_pred EecCCcHHHHHHHHhccccHhhCCHHHHhCcceecCCCCCCCceeeeeeEeHhhheeccCCHHHHHHHHHHHHHHHHHHH
Confidence 9999 56666666666667799999999999999 88764 557999999999998888898 8888999999
Q ss_pred HHcCCCcceEEEeCcHHHH
Q 001059 848 TRFFHAESCDIHLNHGDLL 866 (1170)
Q Consensus 848 ~~lgi~~~~~i~lg~~~il 866 (1170)
+.||++ +.+..++.+.+
T Consensus 170 ~~Lgl~--~~~~~~~~~~~ 186 (255)
T cd00779 170 KRLGLP--FVKVEADSGAI 186 (255)
T ss_pred HHcCCc--EEEEEecCCCC
Confidence 999994 77777776554
|
ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from prokaryotes and from the mitochondria of eukaryotes. |
| >PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.2e-18 Score=189.44 Aligned_cols=248 Identities=19% Similarity=0.268 Sum_probs=148.7
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccC---C-------CceeEEEEEe
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQH---Q-------HVVRYYQAWF 424 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~H---p-------nIV~l~~~~~ 424 (1170)
.+...+.||.|+++.||.+++..||+.+|+|++...... ....+++.+|.-....+.+ | .++.-++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 456788999999999999999999999999998765532 2345667777655544322 1 1111111110
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH---hcCCC----CHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE---SYDHF----DKELAWH 497 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~---~~~~l----~e~~~~~ 497 (1170)
-++ ... ++. .........-.+.+++|.-+.++|.+++. ..... .......
T Consensus 93 i~~------~~~---------~~~--------~~~~~~~~~v~n~~~l~P~~~~dL~~~~~~l~~~~~~~~~l~~~arl~ 149 (288)
T PF14531_consen 93 IPG------KPP---------FFE--------RGPGQSIYWVLNRFLLMPRAQGDLQDLVEALFSRAQTHSPLAFAARLS 149 (288)
T ss_dssp ETT------S-S---------EEE--------ECETTEEEEEESEEEEEE--SEEHHHHHHHHHHHTTTSHHHHHHHHHH
T ss_pred EcC------CCc---------cee--------cCCCCccceeehhhhccchhhhcHHHHHHHHhhcccccchhHHHHHHH
Confidence 000 000 000 00000000112557888888888887754 22222 1122345
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
+..|+++.+++||+.|++|+||||+|+|++.+|.+.|+||+......... .....+..|.||
T Consensus 150 lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~------------------~~~~~~~~~~PP 211 (288)
T PF14531_consen 150 LTVQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRY------------------RCSEFPVAFTPP 211 (288)
T ss_dssp HHHHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEE------------------EGGGS-TTTS-H
T ss_pred HHHHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCcee------------------eccCCCcccCCh
Confidence 55899999999999999999999999999999999999998877543211 002345789999
Q ss_pred ccccCC-------CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 578 EIEQGW-------PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 578 E~l~~~-------~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
|..... -.++.+.|.|+||+++|.|++ ||........... .+ ....+.+...+.||+.+|+.|
T Consensus 212 e~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~------~f-~~C~~~Pe~v~~LI~~lL~~~ 284 (288)
T PF14531_consen 212 ELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW------DF-SRCRDMPEPVQFLIRGLLQRN 284 (288)
T ss_dssp HHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG------GG-TTSS---HHHHHHHHHHT-SS
T ss_pred hhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc------cc-hhcCCcCHHHHHHHHHHccCC
Confidence 976431 237889999999999999997 8764432211100 11 112245567899999999999
Q ss_pred CCCC
Q 001059 648 PSDR 651 (1170)
Q Consensus 648 P~~R 651 (1170)
|.+|
T Consensus 285 ~~~R 288 (288)
T PF14531_consen 285 PEDR 288 (288)
T ss_dssp GGGS
T ss_pred cccC
Confidence 9988
|
|
| >PRK10345 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-17 Score=176.91 Aligned_cols=137 Identities=20% Similarity=0.275 Sum_probs=105.6
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-----cCCCceeEEEEEeecCccccCC
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-----QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-----~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-.+.||+|+||.||. +..++.. +||++..... ...+.+.+|+.+++.+ +||||+++++++...
T Consensus 6 ~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~~--~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~------- 73 (210)
T PRK10345 6 EQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRGD--GGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD------- 73 (210)
T ss_pred CcceecCCCceEEEE--CCCCcCe-EEEEEecccc--chHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC-------
Confidence 347899999999995 7777666 6999875432 2346789999999999 579999999987432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccE-EEEEeeccC---CcHHHHHHhcCCCCHHHHHHHHHHHHHHH-HH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTY-LYIQMEYCP---RTLRQVFESYDHFDKELAWHLFRQIVEGL-AH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~iVmEy~~---gsL~~~l~~~~~l~e~~~~~i~~qI~~gL-~y 508 (1170)
..... +.+||||++ ++|.+++.+. .+++. ..++.|++.++ +|
T Consensus 74 ------------------------------~g~g~v~~~I~e~~G~~~~tL~~~l~~~-~~~e~--~~~~~~~L~~l~~y 120 (210)
T PRK10345 74 ------------------------------CGTGYVYDVIADFDGKPSITLTEFAEQC-RYEED--VAQLRQLLKKLKRY 120 (210)
T ss_pred ------------------------------CCCeEEEEEEecCCCCcchhHHHHHHcc-cccHh--HHHHHHHHHHHHHH
Confidence 01123 347899954 5999999663 56666 35678888887 99
Q ss_pred HHhCCccccCCCCCceeecC----CCCEEEeecCcc
Q 001059 509 IHGQGIIHRDLTPNNIFFDA----RNDIKIGDFGLA 540 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~----~~~vKL~DFGlA 540 (1170)
||+++|+||||||+|||++. ++.++|+||+-+
T Consensus 121 Lh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~ 156 (210)
T PRK10345 121 LLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE 156 (210)
T ss_pred HHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence 99999999999999999974 347999994444
|
|
| >PRK12274 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-16 Score=169.70 Aligned_cols=190 Identities=15% Similarity=0.127 Sum_probs=131.7
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh--hHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--VNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~--~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.+...|++|+||+||.+.. .+..++.+.+.....-.. ....+.+|+++|++|+ |++|++++++.
T Consensus 5 ~~~~~l~~~~f~~v~~~~~--~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~~----------- 71 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG--GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHWD----------- 71 (218)
T ss_pred ccceeecCCCcceEEEeec--CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEEc-----------
Confidence 3567899999999997766 588888887754332111 1125789999999995 58898887541
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
..|++|+|+.| +|.+.+.. . ...++.|++.+|.++|++|
T Consensus 72 ---------------------------------~~~lvmeyI~G~~L~~~~~~------~-~~~~~~qi~~~L~~lH~~G 111 (218)
T PRK12274 72 ---------------------------------GRHLDRSYLAGAAMYQRPPR------G-DLAYFRAARRLLQQLHRCG 111 (218)
T ss_pred ---------------------------------CEEEEEeeecCccHHhhhhh------h-hHHHHHHHHHHHHHHHHCc
Confidence 24899999976 66544321 1 2357789999999999999
Q ss_pred ccccCC-CCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCcc--ccCcccccCccCCCcccccCCCCCC-cc
Q 001059 514 IIHRDL-TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS--VDGTGQVGTYFYTAPEIEQGWPKID-EK 589 (1170)
Q Consensus 514 IiHrDL-Kp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~GT~~Y~APE~l~~~~~~~-~k 589 (1170)
|+|||| ||+|||++.++.++|+|||+|........... .+ ...+.. ... -..+++.|++|+...-....+ ..
T Consensus 112 IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r-~L--~~rDl~~llk~-~~~y~~~~l~~~~~~~l~~~~~~~ 187 (218)
T PRK12274 112 VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMR-LL--AREDLRHLLKH-KRMYCPAALTPVERRVLKRTSWIR 187 (218)
T ss_pred CccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHH-HH--HHHHHHHHHHH-HHhcCCCCCCHHHHhhhccchhHH
Confidence 999999 79999999999999999999985432110000 00 000000 001 124788999998543322223 67
Q ss_pred chhHHHHHHHHHhhc
Q 001059 590 ADMYSLGIVFFELWH 604 (1170)
Q Consensus 590 sDIwSlGviL~ELlt 604 (1170)
.++++.|+-+|.++|
T Consensus 188 ~~w~~~g~~~~~~~~ 202 (218)
T PRK12274 188 ELWFATGKPVYRFVT 202 (218)
T ss_pred HHHHHhcchHHHHHh
Confidence 899999999999998
|
|
| >KOG1637 consensus Threonyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.6e-16 Score=175.34 Aligned_cols=353 Identities=15% Similarity=0.117 Sum_probs=234.6
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCH
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
+....|+-.++|..+++.+.+.+.|+.-|++.||+||.||.+ .-+++++.+.++||+|.- ..++.+|.|.-++
T Consensus 178 ~~lSPGS~FflP~G~~iyN~Lv~fir~ey~~rGf~EVitPniy~~~LWe~SGHwqnY~enmF~~e~-eke~~~LKPMNCP 256 (560)
T KOG1637|consen 178 HELSPGSCFFLPHGTRIYNTLVDFIRAEYRKRGFTEVITPNIYNKKLWETSGHWQNYSENMFKFEV-EKEEFALKPMNCP 256 (560)
T ss_pred ccCCCcceeeccCcchHHHHHHHHHHHHHHhcCCceecCcchhhhhhhhhccchhhhhhhceeeee-chhhhccCccCCC
Confidence 456789999999999999999999999999999999999999 555678899999999866 3467999997666
Q ss_pred HHHHHHHhC----CCCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCcc-cHH-HHHHHHHHHHHHcCCCc
Q 001059 786 PFIRWAISN----QKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASAL-TEA-EVLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 786 ~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~-aDa-Evi~la~~~l~~lgi~~ 854 (1170)
.-.-+..+. +..|+|+.-+|.+.|+|..+ .|.|+|+|-+++||+..+.. .+. -++..+..++.-+|..
T Consensus 257 gHcLmf~~r~rS~reLPlR~aDFg~LHRnE~SGaLsGLTRvRrFqQDDaHIFCt~~Qi~~Eik~~l~fl~~vY~~fgf~- 335 (560)
T KOG1637|consen 257 GHCLMFAHRDRSYRELPLRFADFGVLHRNEASGALSGLTRVRRFQQDDAHIFCTPDQVKEEIKGCLDFLDYVYGVFGFT- 335 (560)
T ss_pred ccccccccCCccHhhCCccccCcceeeeccccccccccceeeeecccCceEEecCccHHHHHHHHHHHHHHHHHhcccc-
Confidence 554444432 24599999999999998654 46678999999999998874 443 5677777777766764
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
+.+.|+.+.- +.+|.-+.|-++-..+-.. +.+.|-+-.....=.+ +.|
T Consensus 336 -f~l~lSTRPe-----~~lG~l~~Wd~AE~~L~~a----------------------l~e~g~pw~lN~GDGA----FYG 383 (560)
T KOG1637|consen 336 -FKLNLSTRPE-----KFLGDLETWDEAEFKLEEA----------------------LNESGEPWVLNPGDGA----FYG 383 (560)
T ss_pred -ceeEeccChH-----HhccCHHHHHHHHHHHHHH----------------------HHHhCCCceecCCCcc----ccc
Confidence 8999998642 2345444443322211111 1111110000000001 112
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
+..++ .+.+++. .......|++|+-+.-.++ ..... .-|-|
T Consensus 384 PKIDi------------~l~Dal~-----r~hQcaTIQLDFqLP~rFd--------L~y~~--------------~~g~~ 424 (560)
T KOG1637|consen 384 PKIDI------------TLDDALG-----RKHQCATIQLDFQLPIRFD--------LEYET--------------EDGDL 424 (560)
T ss_pred ceeee------------EhhhhcC-----cccceeeeeecccChhhcC--------ceeec--------------ccccc
Confidence 21000 0000000 0000112444443332111 10000 00000
Q ss_pred chhhhhcccccccccCCCCCCCCceEEec-c-HHHHHhhccCCC--CCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGASL-A-LETIIQHYPVDF--KPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1090 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGfai-g-lerL~~~L~~~~--~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~ 1090 (1170)
++++ -|.-|| | +||.+++|.++. .++.-..|.++.|++++ +....+|-++...|+.
T Consensus 425 ------------------erPV-mIHRAIlGSvERmiaiL~E~~~gkwPFWlSPRq~~vIpVs-e~~~~ya~~V~~ql~~ 484 (560)
T KOG1637|consen 425 ------------------ERPV-MIHRAILGSVERMIAILLESYGGKWPFWLSPRQAVVIPVS-EGPLDYATSVQKQLEE 484 (560)
T ss_pred ------------------cchh-hHHHHHhhhHHHHHHHHHHHhCCCCCeeeccceEEEEECC-CcchhHHHHHHHHHHh
Confidence 1111 223332 3 899999997433 33334678899999997 7788999999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEc---CCCcccccchHHHHHHHHHH
Q 001059 1091 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHL---DVKKEKEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1091 ~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l---~~~eq~~v~~~~l~~~l~~~ 1158 (1170)
.|+-+++... +..+.+.++.|.-.++.++++||++|.+.++|.|+.+ +++.+..++++++.+.+.++
T Consensus 485 a~f~~Dld~t-~~tl~kkir~Aqla~yn~i~VVGdkE~~~~~vnVr~Rd~~~~~~~~~~tie~~~~~~~~l 554 (560)
T KOG1637|consen 485 AGFYVDLDPT-DSTLRKKIRNAQLAHYNFIFVVGDKEVETGRVNVRTRDNRDNKTESEMTIEELSDEFKEL 554 (560)
T ss_pred hhceeecCCc-cchHHHHHhhhhhcceeEEEEEchhhhhcCceeeeccccccccccceeeHHHHHHHHHHh
Confidence 9998998777 4789999999999999999999999999999999998 44456678888888877654
|
|
| >TIGR00389 glyS_dimeric glycyl-tRNA synthetase, dimeric type | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.1e-15 Score=180.32 Aligned_cols=121 Identities=17% Similarity=0.169 Sum_probs=99.4
Q ss_pred CCc-eEEeccHHHHHhhccC-CCC-------------CCCCCCCceEEEEEcCCC-ccHHHHHHHHHHHHHcCCeEEEee
Q 001059 1036 PSG-VGASLALETIIQHYPV-DFK-------------PVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFVP 1099 (1170)
Q Consensus 1036 ~pA-vGfaiglerL~~~L~~-~~~-------------~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~LR~~Gi~v~~~~ 1099 (1170)
+|- +--|+|+|||+.+|.+ ... .+...+|.+|+|++.+.+ .....|.++++.||..|++|+++.
T Consensus 414 ~P~VIepS~GIdRIi~ALle~~~~e~~~~~~~r~vL~lp~~lAP~kV~VIpl~~~~el~~~A~eIa~~LR~~GI~VeiD~ 493 (551)
T TIGR00389 414 IPHVIEPSFGIDRIIYALLEHSYQEEVLDGEEREVLRLPPHLAPIKVAVLPLVNKEELKEIAKEIFQALRKTGIRIKYDD 493 (551)
T ss_pred cceEEEcccCHHHHHHHHHHhhCccccccccccceeccCCccCCceEEEEEecCcHHHHHHHHHHHHHHHHCCCEEEEEC
Confidence 454 4778999999866632 111 112237889999998622 267899999999999999999877
Q ss_pred CCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHH
Q 001059 1100 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1100 ~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~ 1158 (1170)
. . ++++++++|++.|+|++|+||++++++|+|+||++++++|..++++++.+.+.++
T Consensus 494 s-~-sIGKq~rrADeiGiPf~IIIG~~EledgtVTIRdRdT~eQ~~I~ldeL~~~L~e~ 550 (551)
T TIGR00389 494 S-G-TIGKRYRRADEIGTPFCVTIDFETLEDETVTIRERDSMKQVRVKIKELPSYIKKL 550 (551)
T ss_pred C-C-CHHHHHHHHHHcCCCEEEEECCchhhCCEEEEEECCCCceEEeeHHHHHHHHHhh
Confidence 5 4 4999999999999999999999999999999999999999999999998887654
|
This model describes a glycyl-tRNA synthetase distinct from the two alpha and two beta chains of the tetrameric E. coli glycyl-tRNA synthetase. This enzyme is a homodimeric class II tRNA synthetase and is recognized by pfam model tRNA-synt_2b, which recognizes His, Ser, Pro, and this set of glycyl-tRNA synthetases. |
| >smart00090 RIO RIO-like kinase | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.3e-17 Score=177.63 Aligned_cols=143 Identities=20% Similarity=0.150 Sum_probs=110.9
Q ss_pred CceEEeeeccCCcEEEEEEE-EccCCcEEEEEEEecCCCCh----------------------hhHHHHHHHHHHHHhcc
Q 001059 356 DFEELQPLGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSL----------------------PVNDRILREVATLSRLQ 412 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~-~~~tg~~vAVK~i~~~~~~~----------------------~~~~~~~~Ev~iL~~l~ 412 (1170)
.|.+.+.||+|+||.||+|. +..+|+.||||+++...... .....+.+|+..++++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46778899999999999999 66789999999997543110 01123568999999997
Q ss_pred CCC--ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC
Q 001059 413 HQH--VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH 489 (1170)
Q Consensus 413 Hpn--IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~ 489 (1170)
+.+ +.++++. ...|+||||++| +|.........
T Consensus 109 ~~~i~~p~~~~~--------------------------------------------~~~~lV~E~~~g~~L~~~~~~~~~ 144 (237)
T smart00090 109 EAGVPVPKPIAW--------------------------------------------RRNVLVMEFIGGDGLPAPRLKDVE 144 (237)
T ss_pred hcCCCCCeeeEe--------------------------------------------cCceEEEEEecCCcccccccccCC
Confidence 643 3333321 113799999987 55554434445
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCC-ccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~g-IiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
+....+..++.||+.+|++||++| |+||||||+||+++ ++.++|+|||.|+..
T Consensus 145 ~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 145 PEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred cchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-CCCEEEEEChhhhcc
Confidence 677778899999999999999999 99999999999999 889999999999854
|
|
| >KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.67 E-value=2.2e-16 Score=186.00 Aligned_cols=234 Identities=26% Similarity=0.419 Sum_probs=167.7
Q ss_pred HHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh
Q 001059 408 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES 486 (1170)
Q Consensus 408 L~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~ 486 (1170)
|+.+.|.|+.+++|.++. ...+++|.+||. |+|.+.+..
T Consensus 1 l~~l~h~n~~~f~g~~~~----------------------------------------~~~~~~i~~~c~rGsl~D~i~~ 40 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVD----------------------------------------GPEMIVIWEYCSRGSLLDILSN 40 (484)
T ss_pred CcccchhhhhhheeeEec----------------------------------------CCceEEEEeeecCccHHhHHhc
Confidence 467899999999998853 356789999997 799999876
Q ss_pred -cCCCCHHHHHHHHHHHHHHHHHHHhCCc-cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCcccc
Q 001059 487 -YDHFDKELAWHLFRQIVEGLAHIHGQGI-IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564 (1170)
Q Consensus 487 -~~~l~e~~~~~i~~qI~~gL~yLHs~gI-iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1170)
...++.-....++++|+.||+|||...| .|+.|++.|++++....+||+|||+........ . ...
T Consensus 41 ~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~-~------------~~~ 107 (484)
T KOG1023|consen 41 EDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNCLVDSRWVLKLTDFGLNSLLEETA-E------------PEA 107 (484)
T ss_pred cccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccceeeeeEEEEechhhhcccccccc-c------------ccc
Confidence 4468888888999999999999998766 999999999999999999999999998753200 0 001
Q ss_pred CcccccCccCCCcccccCCC------CCCccchhHHHHHHHHHhhc---CCCch----hHHHHHHHHhh-h-cCCCCCcc
Q 001059 565 GTGQVGTYFYTAPEIEQGWP------KIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLK-Q-KGELPPSW 629 (1170)
Q Consensus 565 ~~~~~GT~~Y~APE~l~~~~------~~~~ksDIwSlGviL~ELlt---Pf~~~----~~~~~~~~~l~-~-~~~~p~~~ 629 (1170)
.....-...|.|||.+.+.. ..+.++||||||++++|+++ ||... ...++...... . ....|..+
T Consensus 108 ~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~ 187 (484)
T KOG1023|consen 108 HHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIE 187 (484)
T ss_pred cchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchh
Confidence 11223456799999987631 14678999999999999996 77642 22233333222 1 11223222
Q ss_pred c--cCCHHHHHHHHHccCCCCCCCCCHHHHHhcc--CCCC--chHHHHHHHHHhcCCCCCccchhhhhcccccchhh
Q 001059 630 V--AKFSEQESLLRRLMSPSPSDRPSATELLQDA--LPPQ--MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETL 700 (1170)
Q Consensus 630 ~--~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~--~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 700 (1170)
. ...+++..+++.||..+|.+||+++++-... .... ....+++.+++++ +.|..+++..+++.+.
T Consensus 188 ~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~~~~~~~nl~D~m~~~l------e~Y~~nLe~~v~eRt~ 258 (484)
T KOG1023|consen 188 LLNELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINKGGSSKGNLMDSLFRML------ESYADNLEKLVDERTA 258 (484)
T ss_pred hhhhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcccccccchhHHHHHHHH------HHHHhhhHHHHHHHHH
Confidence 1 3445688999999999999999999986532 2222 2236677777766 4466666666666443
|
|
| >cd00772 ProRS_core Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.6e-16 Score=172.93 Aligned_cols=155 Identities=14% Similarity=0.131 Sum_probs=126.9
Q ss_pred ccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcc---cccceEEEeccCC----
Q 001059 706 AGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQ---FKRNTVKLLTHGG---- 774 (1170)
Q Consensus 706 ~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~---~~~~my~f~D~~G---- 774 (1170)
++.++. ..++|+.+|+|.++.+++.|++.+++.++++||++|.||.| .+.+.|.. ..++||.+.|.+|
T Consensus 13 ag~~~~-~~~~G~~~~lP~g~~i~~~I~~~i~~~~~~~G~~ev~~P~l~~~~~~~~~g~~~~~~~~e~~~~~~~~~~~~~ 91 (264)
T cd00772 13 AELADQ-GPGRGIINFLPLAKAILDKIENVLDKMFKEHGAQNALFPFFILASFLEKEAEHDEGFSKELAVFKDAGDEELE 91 (264)
T ss_pred cCCccc-cCCCCEEEECCcHHHHHHHHHHHHHHHHHHcCCeEEECCeeccHHHHhhcCCcccccCccceEEEeCCCCccC
Confidence 444443 34889999999999999999999999999999999999999 33322332 3478999999887
Q ss_pred ceeeecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHHHHHH---
Q 001059 775 DLLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKVT--- 843 (1170)
Q Consensus 775 ~~laLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvi~la--- 843 (1170)
+.++|||+.|++++++++.. +..|+|+||+|+|||+| +++. |.+||+|.++++|+.....++.|+..+.
T Consensus 92 ~~l~LrPt~e~~~~~~~~~~i~s~~~LPlrl~~~~~~fR~E~r~~~Gl~R~reF~~~e~~~~~~~~e~a~~e~~~~~~~~ 171 (264)
T cd00772 92 EDFALRPTLEENIGEIAAKFIKSWKDLPQHLNQIGNKFRDEIRPRFGFLRAREFIMKDGHSAHADAEEADEEFLNMLSAY 171 (264)
T ss_pred ceEEECCCCCHHHHHHHHhhhhhhhccCeeEEEEeCeEeCcCCCCCCcceeeEEEEeeeEEecCCHHHHHHHHHHHHHHH
Confidence 89999999999999988763 35699999999999998 7754 4567999999999988778888776555
Q ss_pred HHHHHHcC-CCcceEEEeCcH
Q 001059 844 MDIVTRFF-HAESCDIHLNHG 863 (1170)
Q Consensus 844 ~~~l~~lg-i~~~~~i~lg~~ 863 (1170)
.++++.|| +. +.+.....
T Consensus 172 ~~i~~~l~~lp--~~~~~~~~ 190 (264)
T cd00772 172 AEIARDLAAID--FIEGEADE 190 (264)
T ss_pred HHHHHhcCCcc--EEEEEcCC
Confidence 99999999 64 66666553
|
ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. |
| >PRK14879 serine/threonine protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=99.62 E-value=2.5e-15 Score=162.21 Aligned_cols=135 Identities=27% Similarity=0.342 Sum_probs=107.7
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.||+|++|.||+|.+ +|..+++|+......... ....+.+|+.++..+.|++|+....++..
T Consensus 2 ~~l~~G~~~~vy~~~~--~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~--------- 70 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF--LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVD--------- 70 (211)
T ss_pred cccccCceEEEEEEee--CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEe---------
Confidence 5799999999999988 588899998654322111 12457889999999999988755444321
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
....+++|||++| +|.+++..... ....++.+++.+|.++|+.|
T Consensus 71 -------------------------------~~~~~lv~e~~~G~~L~~~~~~~~~----~~~~i~~~i~~~l~~lH~~~ 115 (211)
T PRK14879 71 -------------------------------PENFIIVMEYIEGEPLKDLINSNGM----EELELSREIGRLVGKLHSAG 115 (211)
T ss_pred -------------------------------CCCCEEEEEEeCCcCHHHHHHhccH----HHHHHHHHHHHHHHHHHhCC
Confidence 2345899999976 88888765332 77889999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
++|||++|.|||++ ++.++|+|||++..
T Consensus 116 i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 116 IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999999999 78999999999874
|
|
| >cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.8e-15 Score=162.28 Aligned_cols=136 Identities=26% Similarity=0.226 Sum_probs=104.8
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh--------------------hHHHHHHHHHHHHhccCCCc
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP--------------------VNDRILREVATLSRLQHQHV 416 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~--------------------~~~~~~~Ev~iL~~l~HpnI 416 (1170)
|.+.+.||.|+||.||+|.+. +|+.||||+++....... ......+|+.++..+.|+++
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDP-DGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhcCCccccCcceEEEEEEcC-CCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 566788999999999999886 899999999875431110 11236778999999988753
Q ss_pred --eeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHH
Q 001059 417 --VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKE 493 (1170)
Q Consensus 417 --V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~ 493 (1170)
+..++ ....+++|||++| +|..... ..
T Consensus 96 ~v~~~~~--------------------------------------------~~~~~lv~e~~~g~~L~~~~~------~~ 125 (198)
T cd05144 96 PVPKPID--------------------------------------------WNRHAVVMEYIDGVELYRVRV------LE 125 (198)
T ss_pred CCCceee--------------------------------------------cCCceEEEEEeCCcchhhccc------cc
Confidence 22221 1123899999986 6655432 13
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
....++.+|+.++.++|+.||+||||||+||+++.++.++|+|||++...
T Consensus 126 ~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~liDfg~~~~~ 175 (198)
T cd05144 126 DPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYIIDWPQMVST 175 (198)
T ss_pred cHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEEEECCccccC
Confidence 45678899999999999999999999999999999999999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom |
| >cd00774 GlyRS-like_core Glycyl-tRNA synthetase (GlyRS)-like class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.61 E-value=1.6e-15 Score=168.58 Aligned_cols=134 Identities=15% Similarity=0.154 Sum_probs=114.6
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcC--CccccccceeccCCCcccccceEEEe----ccCCceeeecCCCC--
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHC--AKHLEIEPMYLLGDCPQFKRNTVKLL----THGGDLLELSHELR-- 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~G--y~~I~tP~~~~~~~~~~~~~~my~f~----D~~G~~laLRPD~T-- 784 (1170)
..++|+.||+|.++.+++.|++.+++.|.++| |++|.||++... +||++. |.+++.++||||.|
T Consensus 19 ~~~~G~~d~~P~g~~l~~~i~~~~~~~~~~~g~~~~~i~tP~i~~~--------~mf~~~~g~~d~~~~~~~Lrp~~~~~ 90 (254)
T cd00774 19 GGVAGFYDYGPLGVELKNNIKSAWRKSFVLEEEDMLEIDSPIITPE--------LMFKTSIGPVESGGNLGYLRPETAQG 90 (254)
T ss_pred cChhcccccCchHHHHHHHHHHHHHHHHHhcCCCeEEEeccccCCH--------HHheeeecccCCCCcccccCCcccch
Confidence 35789999999999999999999999999996 999999998433 677775 45678999999999
Q ss_pred --HHHHHHHHhCC-CCceeEEEecCeEEcCCCC----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCc
Q 001059 785 --LPFIRWAISNQ-KSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 785 --~~iaR~~~~~~-~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~ 854 (1170)
++++|.+.++. ..|+|+||+|+|||+|.++ .|.|||+|+|+|+||.++...+ ..++.+..+++.++|+..
T Consensus 91 ~~~~~~~~~~~~~~~lP~~~~qig~~fR~E~~~~~gl~R~ReF~q~d~~~f~~~~~~~e~~~~v~~~~~~~l~~~G~~~ 169 (254)
T cd00774 91 IFVNFKNLLEFNRRKLPFGVAQIGKSFRNEISPRNGLFRVREFTQAEIEFFVDPEKSHPWFDYWADQRLKWLPKFAQSP 169 (254)
T ss_pred HHHHHHHHHHHhCCCCCchhhhhchhhccccCcccceeeeccchhhheeeeECCCCchHHHHHHHHHHHHHHHHcCCCc
Confidence 79999887754 7899999999999998754 4677899999999998765333 378999999999999853
|
GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP binding and hydrolysis. This alignment contains only sequences from the GlyRS form which homodimerizes. The heterotetramer glyQ is in a different family of class II aaRS. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs. This domain is also found at the N-terminus of the accessory subunit of mitochondrial polymerase gamma (Pol gamma b). Pol gamma b stimulates processive DNA synthesis and is functional as a homodimer, which can associate with the catalytic subunit Pol gamma alpha to form a heterotrimer. Despite significant both structural and sequence similarity with Gly |
| >PLN02734 glycyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=176.43 Aligned_cols=121 Identities=19% Similarity=0.161 Sum_probs=99.3
Q ss_pred CCce-EEeccHHHHHhhcc-CCC------------CCCCCCCCceEEEEEcCCC-ccHHHHHHHHHHHHHcCCeEEEeeC
Q 001059 1036 PSGV-GASLALETIIQHYP-VDF------------KPVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQFVPV 1100 (1170)
Q Consensus 1036 ~pAv-GfaiglerL~~~L~-~~~------------~~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~LR~~Gi~v~~~~~ 1100 (1170)
+|.| --|+|++||+.++. +.. ..+...+|.+|.|+++..+ .....|.++++.||+.|++|+++..
T Consensus 528 iP~VIEPS~GIgRIl~AilE~s~~~~~~De~R~~L~~Pp~IAP~qVaIlPL~~~ee~~~~A~eLa~~LR~~GIrVelDd~ 607 (684)
T PLN02734 528 TPSVIEPSFGIGRIIYCLFEHSFYTRPGDEQLNVFRFPPLVAPIKCTVFPLVQNQQLNAVAKVISKELTAAGISHKIDIT 607 (684)
T ss_pred cCceEecCccHHHHHHHHHHHHhccccCCCcceEEecCcccCCcEEEEEEecCChHHHHHHHHHHHHHHhCCCEEEEECC
Confidence 5655 67899999976653 111 1233467888888877533 3578999999999999999998765
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1101 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1101 ~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+.++++++++|++.|+|++|+||. +|+|+||++++++|..++++++++.+.+.+++
T Consensus 608 -~~SIGKRyrrADeiGIPf~ItIG~----dgtVTIRdRdsgeQ~rV~ldeLv~~I~~li~~ 663 (684)
T PLN02734 608 -GTSIGKRYARTDELGVPFAVTVDS----DGSVTIRERDSKDQVRVPVEEVASVVKDLTDG 663 (684)
T ss_pred -CCCHhHHHHHHHHcCCCEEEEECC----CCeEEEEECCCCceEEeeHHHHHHHHHHHHcC
Confidence 679999999999999999999997 79999999999999999999999999888753
|
|
| >COG0423 GRS1 Glycyl-tRNA synthetase (class II) [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.3e-14 Score=167.14 Aligned_cols=125 Identities=18% Similarity=0.175 Sum_probs=102.9
Q ss_pred CCce-EEeccHHHHHhhc-c-----CCC-------CCCCCCCCceEEEEEcCC-CccHHHHHHHHHHHHHcCCeEEEeeC
Q 001059 1036 PSGV-GASLALETIIQHY-P-----VDF-------KPVRNEAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFVPV 1100 (1170)
Q Consensus 1036 ~pAv-GfaiglerL~~~L-~-----~~~-------~~~~~~~~~~vlv~~~~~-~~~~~~a~~ia~~LR~~Gi~v~~~~~ 1100 (1170)
+|.| -=|+|+||++-++ . ... ..++..+|.++.|+|+.. ++....|.++.+.||+.|+.|..+.
T Consensus 415 iP~VIEPSfGidRi~y~~l~~ay~~ee~~e~R~vLrl~p~lAPikvaVlPL~~k~~l~~~a~~i~~~L~~~~~~v~yDd- 493 (558)
T COG0423 415 IPHVIEPSFGIDRIFYALLEHAYTEEEVEEKRIVLRLPPDLAPIKVAVLPLVKKDELVEIAKEIFEKLRELGFNVDYDD- 493 (558)
T ss_pred cCceeccCCCchHHHHHHHHHhhcccccccceeEEecCcccCceEEEEEeeecccchhHHHHHHHHHHHhcCceEEecC-
Confidence 5654 6789999996544 2 111 112346788999999852 2478899999999999999998544
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 001059 1101 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1101 ~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
..++++.++++++.|.||+|.+..+.+++++||||+++|.+|..|++++|..+|...+.+.
T Consensus 494 -sGsIGrRYrR~DEIGtPfcVTvD~eTleD~tVTiReRDs~~QvRv~i~el~~~l~~~~~~~ 554 (558)
T COG0423 494 -SGSIGRRYRRQDEIGTPFCVTVDFETLEDNTVTIRERDSMEQVRVKIEELADYLRELIKGG 554 (558)
T ss_pred -CCcHhhhhhhccccCCceEEEecCCcccCCcEEEeecCchheeeeeHHHHHHHHHHHhccc
Confidence 3599999999999999999999999999999999999999999999999999999987654
|
|
| >KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.6e-15 Score=186.79 Aligned_cols=190 Identities=21% Similarity=0.324 Sum_probs=144.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc---CCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~e~~~~~ 430 (1170)
...|.+.+.||+|+||+||+|.+.. |+.||+|+=+....- +|+--.+++.+|+ -+.|..+..+++
T Consensus 697 ~~~~~I~~e~G~g~y~~vy~a~~~~-~~~~alK~e~P~~~W-----EfYI~~q~~~RLk~~~~~~~~~~~~a~~------ 764 (974)
T KOG1166|consen 697 GEKFCISKEIGEGSYGSVYVATHSN-GKLVALKVEKPPNPW-----EFYICLQVMERLKPQMLPSIMHISSAHV------ 764 (974)
T ss_pred ceeEEEEeeeccccceEEEEeecCC-CcEEEEEeecCCCce-----eeeehHHHHHhhchhhhcchHHHHHHHc------
Confidence 4678999999999999999999985 999999986543221 1222334445555 122222222210
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....-++|+||.+ |+|.++++..+.+++..+..++.|++.-+++|
T Consensus 765 ----------------------------------~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~l 810 (974)
T KOG1166|consen 765 ----------------------------------FQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHL 810 (974)
T ss_pred ----------------------------------cCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHH
Confidence 1233479999998 89999999888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecC-------CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 510 HGQGIIHRDLTPNNIFFDA-------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~-------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|..+|||+||||+|+||.. ...++|+|||-+-....- + .+ ..-+..++|-.+-.+|.+.|
T Consensus 811 H~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~siDm~lf--------p---~~--~~F~~~~~td~f~C~EM~~g 877 (974)
T KOG1166|consen 811 HAMGIIHGDIKPDNFLLRREICADSDSKGLYLIDFGRSIDMKLF--------P---DG--TKFKAVWHTDLFDCIEMREG 877 (974)
T ss_pred HhcceecccCCcceeEeecccCCCCcccceEEEecccceeeeEc--------C---CC--cEEeeeeccccchhHHHhcC
Confidence 9999999999999999943 235999999998644211 0 00 12245678889999999999
Q ss_pred CCCCCccchhHHHHHHHHHhh
Q 001059 583 WPKIDEKADMYSLGIVFFELW 603 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELl 603 (1170)
..++..+|.|.|+.+++-|+
T Consensus 878 -rpWtYq~DyfGlAa~~h~mL 897 (974)
T KOG1166|consen 878 -RPWTYQIDYFGLAATVHVML 897 (974)
T ss_pred -CCCchhhhhHHHHHHHHHHH
Confidence 56999999999999999998
|
|
| >TIGR03724 arch_bud32 Kae1-associated kinase Bud32 | Back alignment and domain information |
|---|
Probab=99.58 E-value=8.6e-15 Score=156.68 Aligned_cols=131 Identities=27% Similarity=0.322 Sum_probs=101.0
Q ss_pred eeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-h-----hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-P-----VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 362 ~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~-----~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.||+|+||.||+|.+ +|..+++|+........ . ...++.+|+.+++.+.|+++....-++..
T Consensus 1 ~ig~G~~~~vy~~~~--~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~---------- 68 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF--LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVD---------- 68 (199)
T ss_pred CCCCCceEEEEEeec--CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE----------
Confidence 389999999999985 58899999865432111 1 12567789999999998875433222211
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
....+++|||++| +|.+.+..... .++.+++.+|.+||+.|+
T Consensus 69 ------------------------------~~~~~lv~e~~~g~~l~~~~~~~~~-------~~~~~i~~~l~~lH~~gi 111 (199)
T TIGR03724 69 ------------------------------PDNKTIVMEYIEGKPLKDVIEEGND-------ELLREIGRLVGKLHKAGI 111 (199)
T ss_pred ------------------------------CCCCEEEEEEECCccHHHHHhhcHH-------HHHHHHHHHHHHHHHCCe
Confidence 2234799999975 88877654321 788999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchh
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+|||++|.||+++ ++.+++.|||++..
T Consensus 112 ~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 112 VHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred ecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 9999999999999 89999999999875
|
Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine. |
| >PRK14894 glycyl-tRNA synthetase; Provisional | Back alignment and domain information |
|---|
Probab=99.58 E-value=6.1e-14 Score=162.74 Aligned_cols=96 Identities=19% Similarity=0.197 Sum_probs=85.8
Q ss_pred CCCceEEEEEcCCC--ccHHHHHHHHHHHHHcCC-eEEEeeCCCCCHHHHHHHHHhCCCcEEEEE-------cCCcccCC
Q 001059 1062 EAGTSVLVCSRGGG--GLLVERMELVAELWEENI-KAQFVPVPDPSLTEQYEYASEHDIKCLVIL-------TDTGAQKG 1131 (1170)
Q Consensus 1062 ~~~~~vlv~~~~~~--~~~~~a~~ia~~LR~~Gi-~v~~~~~~~~~l~k~~~~A~~~gi~~~iii-------g~~e~~~~ 1131 (1170)
.+|.+|.|+++.++ .....|.++++.|++.|+ +|+++. +.+++++++.|+..|+||+|+| |++|.+++
T Consensus 432 LAPvQVaVLPLs~~~~~l~eyAkeI~~~L~~~Gi~rv~~Dd--sesIGKKyRraDeiGiPy~ITVD~~Tl~dGdkE~e~g 509 (539)
T PRK14894 432 LAPIKVAVFPLKRNHEGLVATAKAVRRQLQVGGRMRTVYDD--TGAIGKLYRRQDEIGTPFCITVDFDTIGQGKDPALAG 509 (539)
T ss_pred CCCceEEEEeccccccchHHHHHHHHHHHHHCCCceEEEcC--CCCHhHHHHhhhccCCCEEEEEeccccccccchhhcC
Confidence 57889999999621 234899999999999998 999766 3489999999999999999999 88999999
Q ss_pred eEEEEEcCCCcccccchHHHHHHHHHHH
Q 001059 1132 LVKVRHLDVKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1132 ~v~vk~l~~~eq~~v~~~~l~~~l~~~l 1159 (1170)
+|+||++++++|..++++++++.|.+.+
T Consensus 510 TVTVR~RDs~eQ~rV~ideli~~L~~~~ 537 (539)
T PRK14894 510 TVTVRDRDTMAQERVPISELEAYLRDRV 537 (539)
T ss_pred eEEEEEeCCCeEEEEEHHHHHHHHHHHh
Confidence 9999999999999999999999998765
|
|
| >KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.8e-16 Score=193.31 Aligned_cols=260 Identities=24% Similarity=0.363 Sum_probs=198.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~ 431 (1170)
...|.+.+.||+|+|+.|-++.... ....+|+|.+.....+.........|..+-+.+. |+|++.+++...
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~------- 91 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSS------- 91 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccC-------
Confidence 4577888899999999998887743 3456788877666544455566667888888887 999999987653
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHH-HhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVF-ESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l-~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....++.++|.. +++...+ .... ..+...+..++.|+..++.|
T Consensus 92 ---------------------------------~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~ 138 (601)
T KOG0590|consen 92 ---------------------------------SPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSY 138 (601)
T ss_pred ---------------------------------CCcccccccCcccccccccccccCCccCCCCcchhhhhhhhccCccc
Confidence 3456688899975 4777776 5444 67888899999999999999
Q ss_pred HH-hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCccccc-CccCCCcccccCCCC
Q 001059 509 IH-GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG-TYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LH-s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-T~~Y~APE~l~~~~~ 585 (1170)
+| ..++.||||||+|.+++..+ .++++|||+|..+... .+........+| ++.|+|||.+.+...
T Consensus 139 ~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~------------~g~~~~~~~~~g~s~~y~a~E~~~~~~~ 206 (601)
T KOG0590|consen 139 LHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNK------------NGAERSLKDRCGSSPPYGAPEHLSGKAY 206 (601)
T ss_pred cCcccccccCCCCCccchhccCCCcccCCCchhhcccccc------------CCcceeeecccCCCCCCCCcccccchhh
Confidence 99 99999999999999999999 9999999999876431 011122344578 999999999988556
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc-CC-CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~-~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
..+..|+||.|+++.-+++ |+............+... .. ....|........+++.+++..+|..|.+.+++-.+
T Consensus 207 ~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d 286 (601)
T KOG0590|consen 207 RGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQLPWNSISDQAHDLLHKILKENPSNRLSIEELKLD 286 (601)
T ss_pred cCCCcccccccccccccccCCCCccccccccccceeecccccccccCccccCChhhhhcccccccCCchhcccccccccc
Confidence 7889999999999999985 655443322221111111 11 234566777788999999999999999999999999
Q ss_pred cCCCC
Q 001059 661 ALPPQ 665 (1170)
Q Consensus 661 ~~~~~ 665 (1170)
+|...
T Consensus 287 ~~~~~ 291 (601)
T KOG0590|consen 287 NWLSS 291 (601)
T ss_pred ccccc
Confidence 98876
|
|
| >cd05119 RIO RIO kinase family, catalytic domain | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.3e-14 Score=153.57 Aligned_cols=136 Identities=26% Similarity=0.301 Sum_probs=93.8
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHH----------------------HHHHHHHHhccCCC--
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI----------------------LREVATLSRLQHQH-- 415 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~----------------------~~Ev~iL~~l~Hpn-- 415 (1170)
.+.||+|+||+||+|.+. +|+.||||+++............ ..|...+..+.+..
T Consensus 2 ~~~lg~G~~g~Vy~a~~~-~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~ 80 (187)
T cd05119 2 GGPIGTGKEADVYLALDG-DGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVP 80 (187)
T ss_pred CcccccccceeEEEEECC-CCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCC
Confidence 467999999999999987 89999999987543322111111 23333443433222
Q ss_pred ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHH-HHHHhcCCCCHH
Q 001059 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLR-QVFESYDHFDKE 493 (1170)
Q Consensus 416 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~-~~l~~~~~l~e~ 493 (1170)
+.+.+++ ...+++|||+++ ++. ..+.... . ..
T Consensus 81 ~~~~~~~--------------------------------------------~~~~lv~e~~~g~~~~~~~l~~~~-~-~~ 114 (187)
T cd05119 81 VPKPIDL--------------------------------------------NRHVLVMEFIGGDGIPAPRLKDVR-L-LE 114 (187)
T ss_pred CCceEec--------------------------------------------CCCEEEEEEeCCCCccChhhhhhh-h-cc
Confidence 1122111 124899999986 221 1121111 1 16
Q ss_pred HHHHHHHHHHHHHHHHHh-CCccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 494 LAWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
.+..++.+++.++.++|+ +||+||||||+||+++ ++.++|+|||.+...
T Consensus 115 ~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 115 DPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYIIDVPQAVEI 164 (187)
T ss_pred cHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEEEECcccccc
Confidence 788999999999999999 9999999999999999 899999999999754
|
The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct |
| >PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated | Back alignment and domain information |
|---|
Probab=99.56 E-value=1.8e-14 Score=177.60 Aligned_cols=136 Identities=26% Similarity=0.282 Sum_probs=105.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CCh-----hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSL-----PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~-----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.|...+.||+|+||+||+|.+. +..+++|+...+. ... ....++.+|+.+++.++|++|+..+.++..
T Consensus 334 ~~~~~~~iG~G~~g~Vy~~~~~--~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~---- 407 (535)
T PRK09605 334 RKIPDHLIGKGAEADIKKGEYL--GRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVD---- 407 (535)
T ss_pred ccCccceeccCCcEEEEEEeec--CccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEe----
Confidence 4456789999999999999885 4445555432221 111 123568899999999999998876544422
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....++||||++| +|.+++. ....++.|++.+|.|
T Consensus 408 ------------------------------------~~~~~lv~E~~~g~~L~~~l~--------~~~~~~~~i~~~L~~ 443 (535)
T PRK09605 408 ------------------------------------PEEKTIVMEYIGGKDLKDVLE--------GNPELVRKVGEIVAK 443 (535)
T ss_pred ------------------------------------CCCCEEEEEecCCCcHHHHHH--------HHHHHHHHHHHHHHH
Confidence 1235799999975 8888775 356789999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
||++|++||||||+|||+ .++.++|+|||+++.
T Consensus 444 lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 444 LHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred HHhCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 999999999999999999 678999999999975
|
|
| >COG0442 ProS Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.51 E-value=4.3e-14 Score=167.13 Aligned_cols=400 Identities=14% Similarity=0.091 Sum_probs=235.3
Q ss_pred hcccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCcee
Q 001059 704 HHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLL 777 (1170)
Q Consensus 704 ~~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~l 777 (1170)
..++.++ +..+|+..|+|...+++++|++.+++.+++.|.+++..|+| .-.++++.+..+||+++|++++.+
T Consensus 27 ~rAg~i~--~~~~G~y~~lP~g~rv~~kI~~iir~em~~~G~~Evl~P~L~p~eLwkEs~r~~~f~~El~~v~drg~~~l 104 (500)
T COG0442 27 LRAGMIR--KPVKGLYVWLPLGLRVLEKIENIIREEMDKIGAQEVLFPTLIPAELWKESGRWEGFGPELFRVKDRGDRPL 104 (500)
T ss_pred HhcCcee--cccCceEEECccHHHHHHHHHHHHHHHHHhcCceEEechhcCHHHHHHHhChhhhcchhhEEEEccCCcee
Confidence 3455555 47899999999999999999999999999999999999999 223447778999999999999999
Q ss_pred eecCC----CCHHHHHHHHhCCCCceeEEEecCeEEcC-CCC---CCCCceeEeEEEEeCCCCcccHH---HHHHHHHHH
Q 001059 778 ELSHE----LRLPFIRWAISNQKSSFKRYEISSVYRRA-IGH---SPPNRYLQGDFDIIGGASALTEA---EVLKVTMDI 846 (1170)
Q Consensus 778 aLRPD----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e-~~~---~~~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~ 846 (1170)
+|||. +|.-+..++.+++.+|+++|+++++||+| +|. .|.|||+--++.-|-.+...++. +++.+..++
T Consensus 105 ~L~PTsEe~it~~~~~~i~SYkdLPl~lYQi~~kfRdE~rpr~gllR~REF~mkdaySfh~~~e~a~~~y~~~~~~Y~~i 184 (500)
T COG0442 105 ALRPTSEEVITDMFRKWIRSYKDLPLKLYQIQSKFRDEKRPRFGLLRGREFLMKDAYSFHADEEDAEETYEKMLDAYSRI 184 (500)
T ss_pred eeCCCcHHHHHHHHHHHhhhhhhCCcceeeeeeEEeccccCCCCccchheeeecccccccCCHHHHHHHHHHHHHHHHHH
Confidence 99995 55666668888999999999999999996 344 46678988888777666556665 456667888
Q ss_pred HHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHH-HHHHHHHHc-CCcHHHHH-
Q 001059 847 VTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVV-IRRQLLQEL-NLAEAVVN- 923 (1170)
Q Consensus 847 l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~-~l~~~~~~- 923 (1170)
+.++|+. +...--+.++..+-... ..+.+.+++-.+...... .-..+-... .+..+..+
T Consensus 185 f~~i~l~--~~~~~ad~g~~Gg~~S~----------------eF~~l~pd~ge~qi~ts~~y~aN~e~a~~~~~~~~~~~ 246 (500)
T COG0442 185 FLRLPLI--FGPVPADEGFIGGSYSH----------------EFEALMPDGGEDQIATSHHYGANFEKAFIDIKFEDEEE 246 (500)
T ss_pred HHhCCce--EEeecccCCCCCCccce----------------EEEEEccCCCccEEEEecchHHhHHHhccCCCcccccc
Confidence 8888874 56555554443211100 000000000000000000 000000000 00000000
Q ss_pred HHHHHH---H-HhcCChhhHHHHHhccC-CCC--------------------------h--hHHHHHHHH--HHHHccCc
Q 001059 924 RLQTVG---L-RFCGAADQALPRLRGAL-PAD--------------------------K--PTRKALDEL--YLRIWRIE 968 (1170)
Q Consensus 924 ~l~~l~---~-~~~g~~~~~l~~l~~~~-~~~--------------------------~--~~~~~l~~L--~l~~~g~~ 968 (1170)
.-..+. . -++.. . .+..++ ..+ . ...+.-.++ .+.. +.
T Consensus 247 ~~~~~v~t~s~~~s~r--~---~~~~i~i~GDn~G~v~Pp~vA~~qV~~~~~~~~ga~~h~~~~~~~rd~~~~l~~--~~ 319 (500)
T COG0442 247 GELEYVHTTSYGISTR--I---IGAAILIHGDNEGLVLPPIVADIQVVIVPIFIKGANEHYKVVNYGRDVAEPLEK--LG 319 (500)
T ss_pred ccceEecccceEEEee--e---eeEEEEEecCCCCccCCchhccceEEEEeccccCcchhhhhhhhhhhhhhhhhh--cc
Confidence 000000 0 00000 0 000000 000 0 000111111 1111 11
Q ss_pred ceEEEc-cC-CCCCCCcc------cceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceE
Q 001059 969 KNIYID-AL-MPPIESYH------RNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVG 1040 (1170)
Q Consensus 969 ~~i~~D-l~-lvrgldYY------tG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvG 1040 (1170)
..+..| .+ ...|.-|| .|.+|+ -|=||-.- ++. -+....|...+.-.+-
T Consensus 320 ~~~~~D~~~~~~~G~kl~~~e~ieVghif~-------------------lG~kyse~---~~a-~v~~r~g~~~~~~mg~ 376 (500)
T COG0442 320 IRVEGDDRSPDGPGFKLNIWEGIEVGHIFE-------------------LGTKYSEA---MNA-TVLDRDGKEQPKTMGC 376 (500)
T ss_pred eEEeccccCCCCCCceeeeeeccccCEEEE-------------------ECchhhhh---Cee-EEEecCCCccceEEEe
Confidence 234444 21 12222122 123333 35555432 110 0122334443233445
Q ss_pred EeccHHHH-HhhccC-----CCCCCCCCCCceEEEEEcCCCc--cHHHHHHHHHHHHHcC-CeEEEeeCCCCCHHHHHHH
Q 001059 1041 ASLALETI-IQHYPV-----DFKPVRNEAGTSVLVCSRGGGG--LLVERMELVAELWEEN-IKAQFVPVPDPSLTEQYEY 1111 (1170)
Q Consensus 1041 faiglerL-~~~L~~-----~~~~~~~~~~~~vlv~~~~~~~--~~~~a~~ia~~LR~~G-i~v~~~~~~~~~l~k~~~~ 1111 (1170)
+++|++|+ .+++++ +...+.+.++.++.|+..+..+ ....+.++...|..+| ..|.+..+ +.+.+-.+..
T Consensus 377 ygigvsr~v~a~ieq~~d~~gi~w~~a~apf~~~iv~~n~~~~~~~~~~~~~~~~l~~~G~~e~~~ddr-~er~g~k~~~ 455 (500)
T COG0442 377 YGIGVSRLVAALLEQIHDENGIIWPKAIAPFDVHIVPVNTKDFKQAEAAEKLYVELPWCGTVEVLLDDR-DERPGVKFAD 455 (500)
T ss_pred hhhhhhhHHHHHHHHhcccccCccccccCcceeEEEEcCchhHHHHHHhhhHHHHHHhCCchhhhhhhh-ccccCccccC
Confidence 68999995 445542 3333336778888888886321 2233345677888899 88887666 6678888999
Q ss_pred HHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 001059 1112 ASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1155 (1170)
Q Consensus 1112 A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l 1155 (1170)
|+..|+|+.+++|++ .++|.+.+|.+.+|+...++...+...+
T Consensus 456 a~liGiP~~~~~g~~-~~~g~~e~k~r~~ge~~~~~~~~l~~~~ 498 (500)
T COG0442 456 ADLIGIPLRIVVGKR-LAEGEVEVKCRKCGEKEAVTIEALFARL 498 (500)
T ss_pred CeEecccceeeeccc-ccCCceeEEecCCCchhhccHHHHHHHh
Confidence 999999999999999 8889999999999999999888877654
|
|
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.51 E-value=1.1e-14 Score=171.77 Aligned_cols=261 Identities=24% Similarity=0.326 Sum_probs=192.7
Q ss_pred cCCceEEeeecc--CCcEEEEEEEE--ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGH--GGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~--G~fG~Vyka~~--~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
...|.....+|. |.+|.||.++. ..++..+|+|.-+..........+=++|+...+++ .|+|.++.+..|.
T Consensus 113 ~~~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e---- 188 (524)
T KOG0601|consen 113 DQRFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWE---- 188 (524)
T ss_pred hhhcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccc----
Confidence 344556677888 99999999999 88999999998544433333334456778777777 5999999777763
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCC-CCHHHHHHHHHHHHH---
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVE--- 504 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~-l~e~~~~~i~~qI~~--- 504 (1170)
....+|+.+|+|+.+|..+.+.... ++...++..+.+..+
T Consensus 189 ------------------------------------~~~~lfiqtE~~~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~ 232 (524)
T KOG0601|consen 189 ------------------------------------GSGILFIQTELCGESLQSYCHTPCNFLPDNLLWNSLRDWLSRDV 232 (524)
T ss_pred ------------------------------------cCCcceeeeccccchhHHhhhcccccCCchhhhhHHhhhhhccc
Confidence 2456799999999999888876554 889999999999999
Q ss_pred -HHHHHHhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 505 -GLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 505 -gL~yLHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
||.++|+.+++|-|+||.||++..+ ..++++|||+...+........ ........|...|++||.+++
T Consensus 233 ~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~~~~~----------~~~~~r~~~~~~Y~~ke~~~~ 302 (524)
T KOG0601|consen 233 TALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGNFSSV----------FKVSKRPEGDCIYAAKELLNG 302 (524)
T ss_pred ccccccCCCcccccccchhheecccccceeecCCcceeEEccCCccccc----------eeeeecCCCCceEeChhhhcc
Confidence 9999999999999999999999999 8899999999987754432211 111122257889999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 583 WPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
-++.+.|+||+|.++.+..+........-...........+|..+ ...+.++...+..|++.+|..|+++..++.+.
T Consensus 303 --l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~ 380 (524)
T KOG0601|consen 303 --LATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALN 380 (524)
T ss_pred --ccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccc
Confidence 589999999999999887641111110000000000122233332 24455677799999999999999999999998
Q ss_pred CCCCc
Q 001059 662 LPPQM 666 (1170)
Q Consensus 662 ~~~~~ 666 (1170)
+.+.+
T Consensus 381 ~i~s~ 385 (524)
T KOG0601|consen 381 VIHSK 385 (524)
T ss_pred cccch
Confidence 77744
|
|
| >PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed | Back alignment and domain information |
|---|
Probab=99.48 E-value=3.8e-13 Score=148.51 Aligned_cols=139 Identities=19% Similarity=0.246 Sum_probs=103.9
Q ss_pred eeec-cCCcEEEEEEEEccCCcEEEEEEEecCCC-----------ChhhHHHHHHHHHHHHhccCCCc--eeEEEEEeec
Q 001059 361 QPLG-HGGFGHVVLCKNKLDGRHYAVKKIRLKDK-----------SLPVNDRILREVATLSRLQHQHV--VRYYQAWFET 426 (1170)
Q Consensus 361 ~~LG-~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-----------~~~~~~~~~~Ev~iL~~l~HpnI--V~l~~~~~e~ 426 (1170)
..|| .||.|+||++... +..+|||.+..... +.....++.+|+.++..+.|++| ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~--~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~ 114 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP--GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR 114 (239)
T ss_pred ceeecCCCCccEEEEEeC--CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence 4677 8888999988775 78899998854221 11223568899999999999885 5555443211
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC--cHHHHHHhcCCCCHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g--sL~~~l~~~~~l~e~~~~~i~~qI~~ 504 (1170)
. ......++||||++| +|.+++.. ..+++.. +.||+.
T Consensus 115 ~------------------------------------~~~~~~~lV~e~l~G~~~L~~~l~~-~~l~~~~----~~~i~~ 153 (239)
T PRK01723 115 H------------------------------------GLFYRADILIERIEGARDLVALLQE-APLSEEQ----WQAIGQ 153 (239)
T ss_pred c------------------------------------CcceeeeEEEEecCCCCCHHHHHhc-CCCCHHH----HHHHHH
Confidence 0 001223699999975 78887754 3455543 578999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+|.+||++||+||||||.|||++.++.++|+|||.++.
T Consensus 154 ~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~ 191 (239)
T PRK01723 154 LIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL 191 (239)
T ss_pred HHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence 99999999999999999999999989999999999875
|
|
| >TIGR02367 PylS pyrrolysyl-tRNA synthetase | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.7e-13 Score=155.98 Aligned_cols=123 Identities=11% Similarity=0.153 Sum_probs=101.9
Q ss_pred hhhhHHhHHHHHHHHcCCcccccccee---c---cCC--CcccccceEEEeccCCceeeecCCCCHHHHHHHHhCC---C
Q 001059 728 LRDYVVQVTKEMFRQHCAKHLEIEPMY---L---LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ---K 796 (1170)
Q Consensus 728 ~~~~I~~~i~~~f~~~Gy~~I~tP~~~---~---~~~--~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~---~ 796 (1170)
-.+.+++.++++|..+||++|.||+|. + ++. +....++||++. +.++||||+|++++|+++.+. .
T Consensus 241 ~~~~Led~IRevfvg~GFqEV~TPtLt~eE~~E~m~~~~g~eI~n~Iyk~e----e~lvLRPdLTPsLaR~La~N~~~l~ 316 (453)
T TIGR02367 241 YLGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRVD----KNFCLRPMLAPNLYNYLRKLDRALP 316 (453)
T ss_pred HHHHHHHHHHHHHHHCCCEEEECCeecchHHHHhhcCccCCcccccceEec----CceEecccCHHHHHHHHHHhhhhcc
Confidence 457899999999999999999999992 2 122 344677899873 368999999999999988743 4
Q ss_pred CceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 797 SSFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 797 ~P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
.|+|+||+|+|||+|.++. +.+||+|+|++++|.+...+|+| .++.++|+.||+. +.+
T Consensus 317 ~PqKIFEIGkVFR~E~~~~thlREF~QL~~eIaG~~atfaDle--alL~e~Lr~LGId--fei 375 (453)
T TIGR02367 317 DPIKIFEIGPCYRKESDGKEHLEEFTMLNFCQMGSGCTRENLE--AIIKDFLDHLEID--FEI 375 (453)
T ss_pred CCeeEEEEcCeEecCCCCCCCcCeEEEEEEEEECCCCCHHHHH--HHHHHHHHHCCCc--eEE
Confidence 5999999999999987654 45679999999999998888777 5999999999983 666
|
PylS is the archaeal enzyme responsible for charging the pyrrolysine tRNA, PylT, by ligating a free molecule of pyrrolysine. Pyrrolysine is encoded at an in-frame UAG (amber) at least in several corrinoid-dependent methyltransferases of the archaeal genera Methanosarcina and Methanococcoides, such as trimethylamine methyltransferase. |
| >PF00587 tRNA-synt_2b: tRNA synthetase class II core domain (G, H, P, S and T) This Prosite entry contains all class II enzymes | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.8e-13 Score=143.65 Aligned_cols=136 Identities=15% Similarity=0.187 Sum_probs=111.1
Q ss_pred hhhhHHhHHHHHHH-HcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHh-----CC
Q 001059 728 LRDYVVQVTKEMFR-QHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAIS-----NQ 795 (1170)
Q Consensus 728 ~~~~I~~~i~~~f~-~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~-----~~ 795 (1170)
+++.|++.+++.+. ++||++|.||+| .+ .++.....++||++.|.+++.++|||+.++++++++.. ++
T Consensus 1 l~~~l~~~~~~~~~~~~G~~ev~~P~l~~~~~~~~sg~~~~~~~~~~~~~~~~~~~~~L~pt~~~~~~~~~~~~~~~~~~ 80 (173)
T PF00587_consen 1 LRNALERFIREEFVLKFGFQEVDTPILIPSEVWEKSGHWDNFSDEMFKVKDRGDEEYCLRPTSEPGIYSLFKNEIRSSYR 80 (173)
T ss_dssp HHHHHHHHHHHHHHHHTTEEEEB--SEEEHHHHHHHSHHHHHGGGSEEEEETTTEEEEE-SSSHHHHHHHHHHHEEBHGG
T ss_pred CHHHHHHHHHHHhHHhcCCEEEECCeEEehHHhhhccccccccCCeeeeeecccccEEeccccccceeeeecceeeeccc
Confidence 46789999999999 999999999999 22 22345567889999999999999999999999998877 23
Q ss_pred CCceeEEEecCeEEcC-CCC---CCCCceeEeEEEEeCCC--CcccHHHHHHHHHHHHHHcCCCcceEEEeCcHH
Q 001059 796 KSSFKRYEISSVYRRA-IGH---SPPNRYLQGDFDIIGGA--SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 864 (1170)
Q Consensus 796 ~~P~r~~Y~g~VfR~e-~~~---~~~~ef~Q~GvEiiG~~--~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~ 864 (1170)
..|+|+|++|++||+| ++. .|.+||+|.++++||.+ ......+++.++.++++.||+. ++.+.+++++
T Consensus 81 ~LP~~~~~~g~~fR~E~~~~~gl~R~reF~~~e~~~f~~~~~~~~~~~~~~~~~~~i~~~lgl~-~~~~~~~~~~ 154 (173)
T PF00587_consen 81 DLPLKLYQIGTCFRNEARPTRGLFRLREFTMDEMHIFCTPEQSEEEFEELLELYKEILEKLGLE-PYRIVLSSSG 154 (173)
T ss_dssp GSSEEEEEEEEEEBSSSSSBSTTTS-SEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTSG-CEEEEEEETC
T ss_pred cCCeEEeecccccccccccccccceeeEeeeeceEEEeCCcccHHHHHHHHHHHHHHHHHcCCc-eEEEEEcCCC
Confidence 4699999999999998 444 35567999999999998 3356679999999999999994 3999998864
|
seryl tRNA synthetase structure; InterPro: IPR002314 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology []. The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric []. Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices [], and are mostly dimeric or multimeric, containing at least three conserved regions [, , ]. However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases []. Based on their mode of binding to the tRNA acceptor stem, both classes of tRNA synthetases have been subdivided into three subclasses, designated 1a, 1b, 1c and 2a, 2b, 2c. This domain includes the glycine, histidine, proline, threonine and serine tRNA synthetases.; GO: 0000166 nucleotide binding, 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding, 0006418 tRNA aminoacylation for protein translation, 0005737 cytoplasm; PDB: 3UH0_A 3UGT_C 3UGQ_A 1B76_B 1GGM_B 1ATI_A 1ADY_C 1ADJ_C 2I4O_A 2I4M_B .... |
| >KOG2324 consensus Prolyl-tRNA synthetase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=99.43 E-value=1.4e-12 Score=142.57 Aligned_cols=352 Identities=10% Similarity=0.101 Sum_probs=203.1
Q ss_pred cccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceee
Q 001059 705 HAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLE 778 (1170)
Q Consensus 705 ~~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~la 778 (1170)
.-|+++ +...|+.-|+|...+..+++.+.+..-+..-|.+.|..|++ ...+.++....+||+|.|+.|+.+|
T Consensus 33 e~GfI~--ps~~G~yq~LPlg~R~~~K~~~~l~~~mqs~Ga~kIslp~ls~~~LWekTgRw~~~gsEl~rl~Dr~gkq~c 110 (457)
T KOG2324|consen 33 EVGFIR--PSSPGLYQLLPLGLRVLNKLCRLLDNEMQSGGAQKISLPILSSKELWEKTGRWDAMGSELFRLHDRKGKQMC 110 (457)
T ss_pred HhCccc--cCCCCceeeccchHHHHHHHHHHHHHHHHhccCeeEeecccChHHHHHhcCcccccchhheEeeccCCCEec
Confidence 345555 66789999999999999999999999999999999999999 3344577788999999999999999
Q ss_pred ecCCCCHHHHHHHHh-----CCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHH--------HHH
Q 001059 779 LSHELRLPFIRWAIS-----NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAE--------VLK 841 (1170)
Q Consensus 779 LRPD~T~~iaR~~~~-----~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaE--------vi~ 841 (1170)
|-|.---.|.+.+++ +++.|+++|++|+-||.| +|+. |.|||+.-|.=-| ..|.| |..
T Consensus 111 L~pThEE~iT~lmat~~~lsykqlPi~vYQigrKfRDElrpRfGLlRgREFlMKDmYsF-----d~~~etA~qTy~~v~~ 185 (457)
T KOG2324|consen 111 LTPTHEEDITALMATYIPLSYKQLPIRVYQIGRKFRDELRPRFGLLRGREFLMKDMYSF-----DSDEETAQQTYQLVDQ 185 (457)
T ss_pred cCCchHHHHHHHHHhcCccccccCcEEeeeechhhhhccCccccchhhHHHHHhhhhcc-----cCCHHHHHHHHHHHHH
Confidence 999544455555554 456799999999999996 5664 3456999888433 33333 334
Q ss_pred HHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHH
Q 001059 842 VTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAV 921 (1170)
Q Consensus 842 la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 921 (1170)
....+++.||+. |.-.=.+.+.+.+- ++-| +.-...++.+.+ ..+..-+
T Consensus 186 aY~~iFkqL~~p--fVkv~AdsG~iGG~-----vShE--------fhl~~~vgED~l-----------~~C~~C~----- 234 (457)
T KOG2324|consen 186 AYDRIFKQLGLP--FVKVWADSGDIGGE-----VSHE--------FHLIHPVGEDTL-----------MSCPSCG----- 234 (457)
T ss_pred HHHHHHHHcCCC--eEEEeecccccCce-----eeee--------EeccCccCccce-----------eecCcCC-----
Confidence 445555666664 22111121111110 0000 000000000000 0000000
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCC----CCCcccceEEEEEeccCC
Q 001059 922 VNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP----IESYHRNLFFQVFSVKEK 997 (1170)
Q Consensus 922 ~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr----gldYYtG~VFe~~~~~~~ 997 (1170)
+.++ .+.++.-+...+.++ .+. ++.-++ |..||-|..
T Consensus 235 ----------~s~n-~e~~~~sk~~~Cp~C----------------~~~---~L~~~~~IEVgHtF~LG~k--------- 275 (457)
T KOG2324|consen 235 ----------YSKN-SEDLDLSKIASCPKC----------------NEG---RLTKTKSIEVGHTFLLGTK--------- 275 (457)
T ss_pred ----------ccCc-hhhhcCCccccCCcc----------------cCC---CcccccceEEEEEEEeccc---------
Confidence 0011 111110000000000 000 111112 233333332
Q ss_pred Ccccccccceeccccccchh-hhhcccccccccCCCCCCCCceEEeccHHHHHhhcc------CCCCCCCCCCCceE-EE
Q 001059 998 YPATLVEGTLLAVGGRYDYL-LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP------VDFKPVRNEAGTSV-LV 1069 (1170)
Q Consensus 998 ~~~~~~~~~~I~~GGRYD~L-~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~------~~~~~~~~~~~~~v-lv 1069 (1170)
|..- -.+| +..-|+.+-.-...++||+.||+++.. .+..++...+|.+| +|
T Consensus 276 ----------------YS~~lna~f-----~~~~gKpe~l~MgCyGIGVtRllaAa~evls~~~~lrwP~~iAPy~vcli 334 (457)
T KOG2324|consen 276 ----------------YSKPLNAKF-----VNVEGKPEFLHMGCYGIGVTRLLAAAAEVLSDDKGLRWPSLIAPYKVCLI 334 (457)
T ss_pred ----------------cccccCcee-----eeecCCcceEEecceeccHHHHHHHHHHHhccccccccccccCcceeEEe
Confidence 2221 1111 111122111112234799999976542 23334445778888 66
Q ss_pred EEcCCCccHHHHHHHHHHHHHcC------CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEc-CCcccCCeEEEEEcCCCc
Q 001059 1070 CSRGGGGLLVERMELVAELWEEN------IKAQFVPVPDPSLTEQYEYASEHDIKCLVILT-DTGAQKGLVKVRHLDVKK 1142 (1170)
Q Consensus 1070 ~~~~~~~~~~~a~~ia~~LR~~G------i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig-~~e~~~~~v~vk~l~~~e 1142 (1170)
.+.. ....+.+.+++.+|-... -.+.+.+.....++++++.|++.||||+||+| ..-..+..+.|+-...||
T Consensus 335 ~pk~-~~~~q~~~ev~~el~~~~~~~~l~~~iLlddr~~ltiG~Ri~dA~~lG~PfviVvg~s~~~~~~~~EV~~~~~ge 413 (457)
T KOG2324|consen 335 GPKK-GSKSQRAQEVISELLNDEAVGNLHGEILLDDREELTIGKRIKDANRLGIPFVIVVGNSASWDNPEIEVRTIRWGE 413 (457)
T ss_pred ccCC-cchhhhHHHHHHHhhcchhhhhhccceeccchhhhhhHHhhhhHHhcCCCEEEEEcccccCCCceEEEEEeecCc
Confidence 5553 555666677776554321 12333444456799999999999999999999 555566799999999999
Q ss_pred ccccchHHHHHHH
Q 001059 1143 EKEVQRESLVRFL 1155 (1170)
Q Consensus 1143 q~~v~~~~l~~~l 1155 (1170)
...+..+.+.+.+
T Consensus 414 ~~~l~~~~~~~l~ 426 (457)
T KOG2324|consen 414 SAELDKDGFMKLL 426 (457)
T ss_pred eeccchhhHHHHh
Confidence 8888777765544
|
|
| >KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.9e-13 Score=167.87 Aligned_cols=282 Identities=22% Similarity=0.227 Sum_probs=205.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh-hHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~-~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..+++.+.+-+-+|+++.++.+.-..+|...++|+......-.. ..+...++-.++-...||-+++..-.
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s--------- 872 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPS--------- 872 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCC---------
Confidence 45788899999999999999998888887777776543221100 11122222222222233444332210
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
......++++|+|.+ ++|...++..+..+.+.++.++..+..+++|||
T Consensus 873 -------------------------------~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~ 921 (1205)
T KOG0606|consen 873 -------------------------------FPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLH 921 (1205)
T ss_pred -------------------------------CCCCCCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccc
Confidence 012456789999996 599999999888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccc-ccc-----------CCCCCCCCCC----ccccCcccccCccC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ-LDQ-----------DAAFPTDTGG----VSVDGTGQVGTYFY 574 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~-~~~-----------~~~~~~~~~~----~~~~~~~~~GT~~Y 574 (1170)
+..+.|||++|.|+|+..+++.+++|||.......-. ... ........+. ........+||+.|
T Consensus 922 s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~ 1001 (1205)
T KOG0606|consen 922 SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDY 1001 (1205)
T ss_pred cchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcc
Confidence 9999999999999999999999999999554332110 000 0000000011 11224456899999
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCC
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
.+||.+.+ ......+|+|++|++++|.++ ||.......++..++......|......++++++++.+++..+|.+|
T Consensus 1002 laPe~~lg-~~hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr 1080 (1205)
T KOG0606|consen 1002 LAPEILLG-RRHGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQR 1080 (1205)
T ss_pred cCCccccc-ccCCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCCCCCCCCccccChhhhhhhhhhhccCchhc
Confidence 99999998 567899999999999999986 78777777777777766666666666778899999999999999999
Q ss_pred CCHH---HHHhccCCCCchHHHHHHHH
Q 001059 652 PSAT---ELLQDALPPQMEYELLDNIL 675 (1170)
Q Consensus 652 Pta~---eiL~~~~~~~~~~~~~~~~~ 675 (1170)
..+. ++-.|+||+...|+.+..-.
T Consensus 1081 ~~a~~~~e~k~~~~~~~~~~~~l~~q~ 1107 (1205)
T KOG0606|consen 1081 LGAKGAAEVKGHPFFQDVDWENLALQK 1107 (1205)
T ss_pred cCcccccccccCCccCCCCcccccccc
Confidence 9888 88999999999988775543
|
|
| >cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.4e-12 Score=131.26 Aligned_cols=131 Identities=28% Similarity=0.328 Sum_probs=105.3
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC--CCceeEEEEEeecCccccCCCCC
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H--pnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
+++.||.|.++.||++... +..+++|....... ...+.+|+..++.++| +++++++....
T Consensus 2 ~~~~i~~g~~~~v~~~~~~--~~~~~iK~~~~~~~----~~~~~~e~~~~~~l~~~~~~~p~~~~~~~------------ 63 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTK--DEDYVLKINPSREK----GADREREVAILQLLARKGLPVPKVLASGE------------ 63 (155)
T ss_pred cceecccccccceEEEEec--CCeEEEEecCCCCc----hhHHHHHHHHHHHHHHcCCCCCeEEEEcC------------
Confidence 3578999999999999985 47899998764322 4568899999999977 48888775541
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--- 512 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~--- 512 (1170)
.....|++|||+++ .+... +......++.+++.+|+++|..
T Consensus 64 ----------------------------~~~~~~~v~e~~~g~~~~~~-------~~~~~~~~~~~~~~~l~~lh~~~~~ 108 (155)
T cd05120 64 ----------------------------SDGWSYLLMEWIEGETLDEV-------SEEEKEDIAEQLAELLAKLHQLPLL 108 (155)
T ss_pred ----------------------------CCCccEEEEEecCCeecccC-------CHHHHHHHHHHHHHHHHHHhCCCce
Confidence 12457999999976 34332 4556677889999999999985
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+++|+||+|.|||++..+.+++.|||.++.
T Consensus 109 ~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 109 VLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred EEEecCCCcceEEEECCcEEEEEecccccC
Confidence 699999999999999989999999999874
|
The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves |
| >PRK04172 pheS phenylalanyl-tRNA synthetase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=9.6e-13 Score=159.38 Aligned_cols=147 Identities=10% Similarity=0.044 Sum_probs=118.1
Q ss_pred ccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccceec---------c----------C----CC-c--c
Q 001059 708 TLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYL---------L----------G----DC-P--Q 761 (1170)
Q Consensus 708 ~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~---------~----------~----~~-~--~ 761 (1170)
+...|-...| +|++|.+...+.++++.++++|..+||++|.||.++. . . +. . .
T Consensus 215 ~k~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~f~~~Gf~e~~~p~vE~~~~nfd~lf~p~~hpaR~~~dtf~~~~~~~~~ 293 (489)
T PRK04172 215 FRPYNVKAPP-PKIYPGKKHPYREFIDEVRDILVEMGFEEMKGPLVETEFWNFDALFQPQDHPAREMQDTFYLKYPGIGD 293 (489)
T ss_pred CccceeCCCC-CCCCCCCCChHHHHHHHHHHHHHHCCCEEeeCCeeeecCcccccccCCCCCCCCCccceEEECCccccc
Confidence 3445555566 8999999999999999999999999999999999921 1 0 00 0 0
Q ss_pred c--------------------ccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEEecCeEEcCCCCC-CCCce
Q 001059 762 F--------------------KRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHS-PPNRY 820 (1170)
Q Consensus 762 ~--------------------~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~~-~~~ef 820 (1170)
. ..=+|.|.+..++.++|||++|++++|+++++...|+|+|++|+|||++.++. +.+||
T Consensus 294 ~~~~~~~~v~~~he~g~~~~~~~~~y~~~~~~~~~~~LR~~~T~~~~r~l~~~~~~p~rlFeiGrVFR~e~~d~~~l~Ef 373 (489)
T PRK04172 294 LPEELVERVKEVHEHGGDTGSRGWGYKWDEDIAKRLVLRTHTTALSARYLASRPEPPQKYFSIGRVFRPDTIDATHLPEF 373 (489)
T ss_pred CcHHHHHHHHHHHhccCCCCCccccCCcchhhhhccccccCChHHHHHHHHhcCCCCeEEEEecceEcCCCCCcccCCch
Confidence 0 00157777777889999999999999999988888999999999999987663 45689
Q ss_pred eEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 821 LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 821 ~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
+|+++.++|.+ ...+|++.++.+++.++|+.+ +.+
T Consensus 374 ~ql~~~i~G~~--~~f~elkg~l~~ll~~lGi~~-~~~ 408 (489)
T PRK04172 374 YQLEGIVMGED--VSFRDLLGILKEFYKRLGFEE-VKF 408 (489)
T ss_pred heEEEEEEeCC--CCHHHHHHHHHHHHHHhCCce-EEE
Confidence 99999999974 347899999999999999853 443
|
|
| >cd00778 ProRS_core_arch_euk Prolyl-tRNA synthetase (ProRS) class II core catalytic domain | Back alignment and domain information |
|---|
Probab=99.38 E-value=4.8e-13 Score=149.43 Aligned_cols=140 Identities=10% Similarity=0.130 Sum_probs=114.1
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc---CCCcccccceEEEeccCCc----eeeecCC
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHGGD----LLELSHE 782 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~G~----~laLRPD 782 (1170)
.+.|+.+|+|.++.+++.|++.+++.+.++||++|.||.+ .+. ++.+...++||++.|.+++ .++|||+
T Consensus 20 ~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~G~~ev~~P~l~~~~~~~~~sg~~~~f~~~~f~~~~~~~~~~~~~~~L~Pt 99 (261)
T cd00778 20 PVKGCMVFRPYGYAIWENIQKILDKEIKETGHENVYFPLLIPESELEKEKEHIEGFAPEVAWVTHGGLEELEEPLALRPT 99 (261)
T ss_pred CCCCeEEEcccHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhhhcchhhcCcceEEEEecCCcccCCcEEEcCC
Confidence 4679999999999999999999999999999999999999 222 2245568899999998754 7999999
Q ss_pred ----CCHHHHHHHHhCCCCceeEEEecCeEEcCCCC----CCCCceeEeEEEE-eCCCCcc-cH-HHHHHHHHHHHHHc-
Q 001059 783 ----LRLPFIRWAISNQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDI-IGGASAL-TE-AEVLKVTMDIVTRF- 850 (1170)
Q Consensus 783 ----~T~~iaR~~~~~~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEi-iG~~~~~-aD-aEvi~la~~~l~~l- 850 (1170)
+|..+++.+.+++..|+|+|++|++||+|..+ .|.+||+|.++.. +...+.. .. .+++.++.++++.|
T Consensus 100 ~e~~~~~~~~~~i~s~r~LPlr~~~~~~~fR~E~~~~~Gl~R~reF~~~d~h~~~~~~e~~~~~~~~~~~~~~~i~~~ll 179 (261)
T cd00778 100 SETAIYPMFSKWIRSYRDLPLKINQWVNVFRWETKTTRPFLRTREFLWQEGHTAHATEEEAEEEVLQILDLYKEFYEDLL 179 (261)
T ss_pred CCHHHHHHHHhhccchhhcCHHHHhhhhhccCCCCCCCceeEeeeeeeeceeeccCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888888877777899999999999998654 2456799999975 5544321 11 36788889999988
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|++
T Consensus 180 gl~ 182 (261)
T cd00778 180 AIP 182 (261)
T ss_pred CCe
Confidence 885
|
ProRS is a homodimer. It is responsible for the attachment of proline to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. Class II assignment is based upon its structure and the presence of three characteristic sequence motifs in the core domain. This subfamily contains the core domain of ProRS from archaea, the cytoplasm of eukaryotes and some bacteria. |
| >PF03129 HGTP_anticodon: Anticodon binding domain; InterPro: IPR004154 tRNA synthetases, or tRNA ligases are involved in protein synthesis | Back alignment and domain information |
|---|
Probab=99.34 E-value=3.8e-12 Score=119.57 Aligned_cols=90 Identities=24% Similarity=0.419 Sum_probs=84.1
Q ss_pred eEEEEEcCCC---ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCc
Q 001059 1066 SVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK 1142 (1170)
Q Consensus 1066 ~vlv~~~~~~---~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~e 1142 (1170)
+|+|++++ . +....|.++++.||+.|++|++++. +.++++++++|++.|+||++++|++|.++|+|+||++.+++
T Consensus 1 qv~Ii~~~-~~~~~~~~~a~~l~~~L~~~gi~v~~d~~-~~~~~k~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~ 78 (94)
T PF03129_consen 1 QVVIIPVG-KKDEEIIEYAQELANKLRKAGIRVELDDS-DKSLGKQIKYADKLGIPFIIIIGEKELENGTVTVKDRDTGE 78 (94)
T ss_dssp SEEEEESS-CSHHHHHHHHHHHHHHHHHTTSEEEEESS-SSTHHHHHHHHHHTTESEEEEEEHHHHHTTEEEEEETTTTE
T ss_pred CEEEEEeC-CCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCchhHHHHHHhhcCCeEEEEECchhHhCCEEEEEECCCCc
Confidence 47888986 5 6788999999999999999999885 78999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHHH
Q 001059 1143 EKEVQRESLVRFLLD 1157 (1170)
Q Consensus 1143 q~~v~~~~l~~~l~~ 1157 (1170)
+..+++++++++|++
T Consensus 79 ~~~v~~~el~~~l~~ 93 (94)
T PF03129_consen 79 QETVSLEELIEYLKE 93 (94)
T ss_dssp EEEEECCHHHHHHHH
T ss_pred EEEEEHHHHHHHHhh
Confidence 999999999999875
|
This domain is found in histidyl, glycyl, threonyl and prolyl tRNA synthetases [] it is probably the anticodon binding domain [].; GO: 0004812 aminoacyl-tRNA ligase activity, 0005524 ATP binding; PDB: 1KOG_B 1EVL_D 1EVK_B 1QF6_A 1FYF_B 2I4O_A 2I4M_A 2I4N_A 2I4L_A 1HC7_D .... |
| >KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning] | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.1e-12 Score=154.87 Aligned_cols=250 Identities=25% Similarity=0.265 Sum_probs=182.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEc-cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNK-LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~-~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.+++..+|.++..||.|.|+.|+.+..+ .++..|++|.+...-........-..|+.+...+ .|.++++++..|.+
T Consensus 260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~-- 337 (524)
T KOG0601|consen 260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQ-- 337 (524)
T ss_pred ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccc--
Confidence 5778899999999999999999998866 6788999998765444333333446788887777 69999999888743
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
.+..||..|||. +++.........+++...+++..|++.++
T Consensus 338 --------------------------------------~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l 379 (524)
T KOG0601|consen 338 --------------------------------------LRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTAL 379 (524)
T ss_pred --------------------------------------cccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhcc
Confidence 345579999995 45554444444588889999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCC-CcccccCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT-APEIEQGWP 584 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~-APE~l~~~~ 584 (1170)
.++|+..++|+|+||+||++..+ +..+++|||..+.+... .....++-+++ .+|++....
T Consensus 380 ~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~------------------~~~~~~~~r~~p~~~~~~e~~ 441 (524)
T KOG0601|consen 380 NVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFS------------------SGVFHHIDRLYPIAEILLEDY 441 (524)
T ss_pred ccccchhhhcccccccceeeccchhhhhcccccccccccee------------------cccccccccccccchhhcccc
Confidence 99999999999999999999886 78999999998743211 11122333444 356665556
Q ss_pred CCCccchhHHHHHHHHHhhc--CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 585 KIDEKADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt--Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
.+..++|++|||..+.+.++ |+..... ....+ ..+..|... ....++..+.+.++.+++..||.+.++..|.-
T Consensus 442 ~~~~~~~~~sl~~~~~e~~~~~~ls~~~~--~~~~i--~~~~~p~~~-~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~ 516 (524)
T KOG0601|consen 442 PHLSKADIFSLGLSVDEAITGSPLSESGV--QSLTI--RSGDTPNLP-GLKLQLQVLLKVMINPDRKRRPSAVELSLHSE 516 (524)
T ss_pred ccccccccccccccccccccCcccCcccc--cceee--ecccccCCC-chHHhhhhhhhhhcCCccccchhhhhhcccch
Confidence 78899999999999999886 3322111 11111 122222222 22257788999999999999999999988753
|
|
| >cd00861 ProRS_anticodon_short ProRS Prolyl-anticodon binding domain, short version found predominantly in bacteria | Back alignment and domain information |
|---|
Probab=99.28 E-value=1.8e-11 Score=114.93 Aligned_cols=91 Identities=15% Similarity=0.178 Sum_probs=82.1
Q ss_pred CceEEEEEcCCC--ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 001059 1064 GTSVLVCSRGGG--GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1141 (1170)
Q Consensus 1064 ~~~vlv~~~~~~--~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~ 1141 (1170)
|.++.|++...+ ....+|++++..||..|++|++++. .+++++++++|++.|+++++++|++|.++++|+||++.++
T Consensus 1 P~qv~i~p~~~~~~~~~~~a~~la~~Lr~~g~~v~~d~~-~~~l~k~i~~a~~~g~~~~iiiG~~e~~~~~v~vk~~~~~ 79 (94)
T cd00861 1 PFDVVIIPMNMKDEVQQELAEKLYAELQAAGVDVLLDDR-NERPGVKFADADLIGIPYRIVVGKKSAAEGIVEIKVRKTG 79 (94)
T ss_pred CeEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCEEEEECC-CCCcccchhHHHhcCCCEEEEECCchhhCCEEEEEECCCC
Confidence 467888888632 4678999999999999999998876 6799999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHH
Q 001059 1142 KEKEVQRESLVRFL 1155 (1170)
Q Consensus 1142 eq~~v~~~~l~~~l 1155 (1170)
++..++++++.+.+
T Consensus 80 ~~~~~~~~~~~~~l 93 (94)
T cd00861 80 EKEEISIDELLEFL 93 (94)
T ss_pred cceEEeHHHHHHhh
Confidence 99999999987765
|
ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. |
| >cd00860 ThrRS_anticodon ThrRS Threonyl-anticodon binding domain | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-11 Score=112.17 Aligned_cols=90 Identities=18% Similarity=0.194 Sum_probs=82.3
Q ss_pred CceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcc
Q 001059 1064 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKE 1143 (1170)
Q Consensus 1064 ~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq 1143 (1170)
|.+++|++.+ +....+|++++..||+.|++|++++. .+++++++++|++.|++++|++|++|..+++++++|+.++++
T Consensus 1 p~~v~ii~~~-~~~~~~a~~~~~~Lr~~g~~v~~d~~-~~~~~~~~~~a~~~g~~~~iiig~~e~~~~~v~lk~~~~~~~ 78 (91)
T cd00860 1 PVQVVVIPVT-DEHLDYAKEVAKKLSDAGIRVEVDLR-NEKLGKKIREAQLQKIPYILVVGDKEVETGTVSVRTRDGGDL 78 (91)
T ss_pred CeEEEEEeeC-chHHHHHHHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcc
Confidence 4578888875 66789999999999999999998876 679999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHH
Q 001059 1144 KEVQRESLVRFL 1155 (1170)
Q Consensus 1144 ~~v~~~~l~~~l 1155 (1170)
..++++++++.+
T Consensus 79 ~~~~~~~~~~~~ 90 (91)
T cd00860 79 GSMSLDEFIEKL 90 (91)
T ss_pred ceEcHHHHHHHh
Confidence 999999987654
|
ThrRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. |
| >cd00858 GlyRS_anticodon GlyRS Glycyl-anticodon binding domain | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.7e-11 Score=117.70 Aligned_cols=97 Identities=22% Similarity=0.204 Sum_probs=86.4
Q ss_pred CCCCceEEEEEcCC-CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcC
Q 001059 1061 NEAGTSVLVCSRGG-GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLD 1139 (1170)
Q Consensus 1061 ~~~~~~vlv~~~~~-~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~ 1139 (1170)
..++.+|+|++.+. +.....|++++..||+.|++|++++. +++++++++|++.|+++++++|++|.++|+|+||++.
T Consensus 23 ~lap~~v~Ii~~~~~~~~~~~a~~la~~LR~~gi~v~~d~~--~sl~kqlk~A~k~g~~~~iiiG~~e~~~~~v~lk~l~ 100 (121)
T cd00858 23 ALAPIKVAVLPLVKRDELVEIAKEISEELRELGFSVKYDDS--GSIGRRYARQDEIGTPFCVTVDFDTLEDGTVTIRERD 100 (121)
T ss_pred CcCCcEEEEEecCCcHHHHHHHHHHHHHHHHCCCEEEEeCC--CCHHHHHHHhHhcCCCEEEEECcCchhCCEEEEEECC
Confidence 35678899998741 34678999999999999999998775 6999999999999999999999999999999999999
Q ss_pred CCcccccchHHHHHHHHHHH
Q 001059 1140 VKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1140 ~~eq~~v~~~~l~~~l~~~l 1159 (1170)
++++.+++++++.+.+..++
T Consensus 101 ~~~~~~v~l~~l~~~l~~~~ 120 (121)
T cd00858 101 SMRQVRVKIEELPSYLRELI 120 (121)
T ss_pred CCceEEEEHHHHHHHHHHHh
Confidence 99999999999988887654
|
GlyRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. |
| >cd00862 ProRS_anticodon_zinc ProRS Prolyl-anticodon binding domain, long version found predominantly in eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=99.24 E-value=4.9e-11 Score=127.94 Aligned_cols=106 Identities=14% Similarity=0.087 Sum_probs=94.8
Q ss_pred CCCCCceEEEEEcCCCc------cHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeE
Q 001059 1060 RNEAGTSVLVCSRGGGG------LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLV 1133 (1170)
Q Consensus 1060 ~~~~~~~vlv~~~~~~~------~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v 1133 (1170)
+..+|.+|+|++++ +. ...++.++++.||+.|++|++++....++++++++|+.+|+|++|+||++|+++|+|
T Consensus 6 ~~iAP~qVvIipi~-~~~~~~~~~~~~a~~i~~~Lr~~Girv~~D~r~~~s~g~K~~~ae~~GvP~~I~IG~~Ele~g~V 84 (202)
T cd00862 6 PRVAPIQVVIVPIG-IKDEKREEVLEAADELAERLKAAGIRVHVDDRDNYTPGWKFNDWELKGVPLRIEIGPRDLEKNTV 84 (202)
T ss_pred hhhcCceEEEEEec-CCccchHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHhHHHHHHHhCCCCEEEEECcchhhCCEE
Confidence 34678999999985 33 678899999999999999999887433999999999999999999999999999999
Q ss_pred EEEEcCCCcccccchHHHHHHHHHHHHhhccCC
Q 001059 1134 KVRHLDVKKEKEVQRESLVRFLLDAIASQFRNP 1166 (1170)
Q Consensus 1134 ~vk~l~~~eq~~v~~~~l~~~l~~~l~~~~~~~ 1166 (1170)
+|++++++++..++++++++.+..+|+..++|+
T Consensus 85 ~v~~Rd~~ek~~v~~~el~~~i~~ll~~i~~~l 117 (202)
T cd00862 85 VIVRRDTGEKKTVPLAELVEKVPELLDEIQEDL 117 (202)
T ss_pred EEEEecCCcceEEEHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999988888777653
|
ProRS belongs to class II aminoacyl-tRNA synthetases (aaRS). This alignment contains the anticodon binding domain, which is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only, and an additional C-terminal zinc-binding domain specific to this subfamily of aaRSs. |
| >PRK09537 pylS pyrolysyl-tRNA synthetase; Reviewed | Back alignment and domain information |
|---|
Probab=99.23 E-value=3.7e-11 Score=139.28 Aligned_cols=123 Identities=11% Similarity=0.147 Sum_probs=98.9
Q ss_pred hhhHHhHHHHHHHHcCCcccccccee----c--cCC--CcccccceEEEeccCCceeeecCCCCHHHHHHHHhC---CCC
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMY----L--LGD--CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKS 797 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~----~--~~~--~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~---~~~ 797 (1170)
...+++.++++|..+||.||.||.|. + .+. +....+.||.+ ++.++|||++|++++|+++.+ ...
T Consensus 206 ~s~Le~aIR~~f~~~GF~EV~TPtLt~ee~~e~~g~~~g~~i~~~my~i----deel~LRpsLtPsLlr~la~n~k~~~~ 281 (417)
T PRK09537 206 LGKLERDITKFFVDRGFLEIKSPILIPAEYIERMGIDNDTELSKQIFRV----DKNFCLRPMLAPGLYNYLRKLDRILPD 281 (417)
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHHHhCCCCcccchhhheee----CCceEehhhhHHHHHHHHHhhhhcccC
Confidence 56899999999999999999999991 1 111 23345788876 247999999999999988764 356
Q ss_pred ceeEEEecCeEEcCCCCC-CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 798 SFKRYEISSVYRRAIGHS-PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 798 P~r~~Y~g~VfR~e~~~~-~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
|+|+||+|+|||+|.++. +.+||+|+|++++|.+...+| +..++.++|+.||+. |++.
T Consensus 282 P~RIFEIG~VFR~E~~g~~hlrEf~Ql~~~iiGs~~~f~d--L~~lleeLL~~LGI~--f~i~ 340 (417)
T PRK09537 282 PIKIFEIGPCYRKESDGKEHLEEFTMVNFCQMGSGCTREN--LENIIDDFLKHLGID--YEII 340 (417)
T ss_pred CeeEEEEeceEecCCCCCCCcceEEEEEEEEeCCchHHHH--HHHHHHHHHHHCCCC--cEEe
Confidence 999999999999986654 445799999999997766655 669999999999984 6665
|
|
| >PTZ00326 phenylalanyl-tRNA synthetase alpha chain; Provisional | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.4e-10 Score=136.85 Aligned_cols=164 Identities=10% Similarity=0.030 Sum_probs=121.7
Q ss_pred cCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccc-e---------eccCCCcc--cccceEEEeccC-----
Q 001059 711 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEP-M---------YLLGDCPQ--FKRNTVKLLTHG----- 773 (1170)
Q Consensus 711 ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~-~---------~~~~~~~~--~~~~my~f~D~~----- 773 (1170)
.|-...| +...+-..--...+.+.++++|..-||+++.+|. + ++...... .....|.+.++.
T Consensus 214 yn~~~~~-~~~~~g~~HPl~~~~~~i~~if~~mGF~e~~~~~~ves~f~NFDaL~~PqdHPARd~~DTFyl~~~~~~~~~ 292 (494)
T PTZ00326 214 YNFNALG-KKIGGGNLHPLLKVRREFREILLEMGFEEMPTNRYVESSFWNFDALFQPQQHPARDAQDTFFLSKPETSKVN 292 (494)
T ss_pred ceecCCC-CCCCCCCCChHHHHHHHHHHHHHhCCCEEecCCCCccccchhhhhhcCCCCCCCCCcCceEEEcCccccccc
Confidence 3433344 3333334445678899999999999999998873 3 11111110 124456554321
Q ss_pred --------------------------------CceeeecCCCCHHHHHHHHhCC-------C-CceeEEEecCeEEcCCC
Q 001059 774 --------------------------------GDLLELSHELRLPFIRWAISNQ-------K-SSFKRYEISSVYRRAIG 813 (1170)
Q Consensus 774 --------------------------------G~~laLRPD~T~~iaR~~~~~~-------~-~P~r~~Y~g~VfR~e~~ 813 (1170)
.+.++||+++|++.+|+++++. . .|+|+|++|+|||+|.+
T Consensus 293 ~~p~~~~~~Vk~~He~G~~gS~Gw~y~W~~e~a~~~vLRtHtTa~~aR~l~~~~~~~~~~~~~~P~k~fsigrVfR~d~~ 372 (494)
T PTZ00326 293 DLDDDYVERVKKVHEVGGYGSIGWRYDWKLEEARKNILRTHTTAVSARMLYKLAQEYKKTGPFKPKKYFSIDRVFRNETL 372 (494)
T ss_pred cCcHHHHHHHHHHhccCCcCCcccccccccchhccccccCCCCHHHHHHHHhhccccccccCCCCceEEecCCEecCCCC
Confidence 1478999999999999999852 2 39999999999999876
Q ss_pred C-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCc-ceE-----------------------EEeCcHHHHH-
Q 001059 814 H-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAE-SCD-----------------------IHLNHGDLLE- 867 (1170)
Q Consensus 814 ~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~-~~~-----------------------i~lg~~~il~- 867 (1170)
+ ++..+|+|+++.++|.+. ++++++.++.++++++|+.+ .|+ |+|++.++++
T Consensus 373 DatH~~eFhQ~Eg~vi~~~~--s~~~L~~~l~~f~~~lG~~~~RfrP~yfPfTEPS~Ev~v~~~~~gkWIEIgg~Gm~rp 450 (494)
T PTZ00326 373 DATHLAEFHQVEGFVIDRNL--TLGDLIGTIREFFRRIGITKLRFKPAFNPYTEPSMEIFGYHPGLKKWVEVGNSGIFRP 450 (494)
T ss_pred CCCcCceeEEEEEEEEeCCC--CHHHHHHHHHHHHHhcCCCceEEecCCCCCCCCeeEEEEEecCCCcEEEEeCcCccCH
Confidence 5 455679999999999775 78999999999999999853 265 8999999998
Q ss_pred HHHHHhCCCH
Q 001059 868 AIWSWAGIKA 877 (1170)
Q Consensus 868 ~~l~~lgl~~ 877 (1170)
.+++.+|+++
T Consensus 451 evL~~~Gi~~ 460 (494)
T PTZ00326 451 EMLRPMGFPE 460 (494)
T ss_pred HHHHhcCCCC
Confidence 9999999964
|
|
| >TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase | Back alignment and domain information |
|---|
Probab=99.17 E-value=9.5e-11 Score=140.39 Aligned_cols=73 Identities=26% Similarity=0.347 Sum_probs=56.4
Q ss_pred EEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHH-HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhcc
Q 001059 469 LYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVE-GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLK 544 (1170)
Q Consensus 469 l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~-gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~ 544 (1170)
-+++|||++| +|.+..... ...+ ...++.+++. .+..+|..|++|+|+||.||+++.++.++|+|||++..+.
T Consensus 233 ~vLvmE~i~G~~L~~~~~~~~~~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 233 RVLTMEWIDGIPLSDIAALDEAGLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred ceEEEEeECCcccccHHHHHhcCCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 4899999976 676655421 1222 2345556655 4788999999999999999999999999999999998653
|
This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species. |
| >cd00738 HGTP_anticodon HGTP anticodon binding domain, as found at the C-terminus of histidyl, glycyl, threonyl and prolyl tRNA synthetases, which are classified as a group of class II aminoacyl-tRNA synthetases (aaRS) | Back alignment and domain information |
|---|
Probab=99.15 E-value=2.6e-10 Score=106.71 Aligned_cols=90 Identities=14% Similarity=0.233 Sum_probs=81.2
Q ss_pred CceEEEEEcCCC---ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCC
Q 001059 1064 GTSVLVCSRGGG---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV 1140 (1170)
Q Consensus 1064 ~~~vlv~~~~~~---~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~ 1140 (1170)
|.+++|++.+ + .....|++++..||..|++|++.+. .+++++++++|++.|+++++++|++|+.+++++++++.+
T Consensus 1 p~~v~ii~~~-~~~~~~~~~a~~~~~~Lr~~g~~v~~~~~-~~~~~k~~~~a~~~g~~~~iiig~~e~~~~~v~i~~~~~ 78 (94)
T cd00738 1 PIDVAIVPLT-DPRVEAREYAQKLLNALLANGIRVLYDDR-ERKIGKKFREADLRGVPFAVVVGEDELENGKVTVKSRDT 78 (94)
T ss_pred CeEEEEEECC-CCcHHHHHHHHHHHHHHHHCCCEEEecCC-CcCHhHHHHHHHhCCCCEEEEECCChhhCCEEEEEECCC
Confidence 4578888875 5 6789999999999999999998775 579999999999999999999999999999999999999
Q ss_pred CcccccchHHHHHHH
Q 001059 1141 KKEKEVQRESLVRFL 1155 (1170)
Q Consensus 1141 ~eq~~v~~~~l~~~l 1155 (1170)
+++..++++++.+.|
T Consensus 79 ~~~~~~~~~~~~~~i 93 (94)
T cd00738 79 GESETLHVDELPEFL 93 (94)
T ss_pred CceeEEEHHHHHhhc
Confidence 999999999887654
|
In aaRSs, the anticodon binding domain is responsible for specificity in tRNA-binding, so that the activated amino acid is transferred to a ribose 3' OH group of the appropriate tRNA only. This domain is also found in the accessory subunit of mitochondrial polymerase gamma (Pol gamma b). |
| >cd00768 class_II_aaRS-like_core Class II tRNA amino-acyl synthetase-like catalytic core domain | Back alignment and domain information |
|---|
Probab=99.14 E-value=2.9e-10 Score=122.61 Aligned_cols=130 Identities=13% Similarity=0.127 Sum_probs=101.9
Q ss_pred hhhHHhHHHHHHHHcCCccccccceec----cCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCC-CCceeEEE
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYL----LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-KSSFKRYE 803 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~-~~P~r~~Y 803 (1170)
++.+++.++++|..+||++|.||.|.. ...+.. .+.+..+.+..++..+|||++|+++++.++.|. ..|+|+||
T Consensus 2 ~~~~~~~~r~~l~~~Gf~Ev~t~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~LR~s~~~~l~~~~~~n~~~~~~~lfe 80 (211)
T cd00768 2 RSKIEQKLRRFMAELGFQEVETPIVEREPLLEKAGHE-PKDLLPVGAENEEDLYLRPTLEPGLVRLFVSHIRKLPLRLAE 80 (211)
T ss_pred HHHHHHHHHHHHHHcCCEEeEcceecHHHHHHHcCcc-HhheeeeecCCCCEEEECCCCcHHHHHHHHhhcccCCEEEEE
Confidence 568899999999999999999999921 111211 245666677778999999999999999998764 45999999
Q ss_pred ecCeEEcCCCC---CCCCceeEeEEEEeCCCCc--ccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 804 ISSVYRRAIGH---SPPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 804 ~g~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~--~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
+|+|||.+... .+.+||+|+|++++|.... ....+++.++.++++.+|+..++.+.
T Consensus 81 ig~vfr~e~~~~~~~~~~ef~~l~~~~~g~~~~~~~~~~~~~~~~~~~l~~lg~~~~~~~~ 141 (211)
T cd00768 81 IGPAFRNEGGRRGLRRVREFTQLEGEVFGEDGEEASEFEELIELTEELLRALGIKLDIVFV 141 (211)
T ss_pred EcceeecCCCccccccceeEEEcCEEEEcCCchhHHHHHHHHHHHHHHHHHcCCCcceEEE
Confidence 99999986543 2346899999999997653 25689999999999999974224443
|
Class II amino acyl-tRNA synthetases (aaRS) share a common fold and generally attach an amino acid to the 3' OH of ribose of the appropriate tRNA. PheRS is an exception in that it attaches the amino acid at the 2'-OH group, like class I aaRSs. These enzymes are usually homodimers. This domain is primarily responsible for ATP-dependent formation of the enzyme bound aminoacyl-adenylate. The substrate specificity of this reaction is further determined by additional domains. Intererestingly, this domain is also found is asparagine synthase A (AsnA), in the accessory subunit of mitochondrial polymerase gamma and in the bacterial ATP phosphoribosyltransferase regulatory subunit HisZ. |
| >KOG1266 consensus Protein kinase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.2e-10 Score=127.39 Aligned_cols=245 Identities=18% Similarity=0.244 Sum_probs=153.1
Q ss_pred EEEEEEEccCCcEEEEEEEecCC-CChh-hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCccccccc
Q 001059 370 HVVLCKNKLDGRHYAVKKIRLKD-KSLP-VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTF 447 (1170)
Q Consensus 370 ~Vyka~~~~tg~~vAVK~i~~~~-~~~~-~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~ 447 (1170)
.||++.+...|.+|+.--+.... +... .......=+.-|-++.|-|||+++.+|-+..
T Consensus 81 ~v~lamd~e~g~evvwneVq~~~rK~~~~qeek~~~vFdnllqlvHsnlvkfH~yw~d~K-------------------- 140 (458)
T KOG1266|consen 81 DVYLAMDTEEGVEVVWNEVQFSERKNPKEQEEKRRAVFDNLLQLVHSNLVKFHKYWTDKK-------------------- 140 (458)
T ss_pred HHHHHhhhccCchhhHHHHHHHHhcChhhCHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--------------------
Confidence 35666666666665544332110 0000 1111222244556668999999998884431
Q ss_pred ccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHhC--CccccCCC
Q 001059 448 SNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGLAHIHGQ--GIIHRDLT 520 (1170)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL~yLHs~--gIiHrDLK 520 (1170)
..+.....+++||+. |++.+.|++. ..+......+|+.||+.||.|||+. -|+|+++.
T Consensus 141 ---------------~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlT 205 (458)
T KOG1266|consen 141 ---------------YEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLT 205 (458)
T ss_pred ---------------cccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcc
Confidence 124566788999996 7999988753 3477777889999999999999986 49999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
.+-|++..+|-+||+---..... . ..............+-++|.|||.=.. .+.+-++|||+||....
T Consensus 206 c~tifiq~ngLIkig~~ap~s~h-------~----s~~~~~~~Ek~~~~~~~g~~a~~sg~~-tn~~~a~dIy~fgmcAl 273 (458)
T KOG1266|consen 206 CDTIFIQHNGLIKIGSVAPDSTH-------P----SVNSTREAEKSVNTSLPGFSAPESGTT-TNTTGASDIYKFGMCAL 273 (458)
T ss_pred hhheeecCCceEEecccCccccc-------h----hhhhhhHhhhhccccCCccccCCcCcc-cccccchhhhhhhHHHH
Confidence 99999999999998621111100 0 000000111223457789999996544 34677899999999999
Q ss_pred Hhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 601 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 601 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||.- |-......+....+..-.... -.+-.+.+|.+|+...|..||++.+++.||+.-.+.
T Consensus 274 emailEiq~tnseS~~~~ee~ia~~i~~l------en~lqr~~i~kcl~~eP~~rp~ar~llfHpllfeVh 338 (458)
T KOG1266|consen 274 EMAILEIQSTNSESKVEVEENIANVIIGL------ENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFEVH 338 (458)
T ss_pred HHHHheeccCCCcceeehhhhhhhheeec------cCccccCcCcccccCCCCCCcchhhhhcCceeeecc
Confidence 9952 322221111110000000000 011235689999999999999999999999765553
|
|
| >KOG1243 consensus Protein kinase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.3e-09 Score=130.04 Aligned_cols=221 Identities=18% Similarity=0.234 Sum_probs=146.0
Q ss_pred EEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccccc
Q 001059 373 LCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 452 (1170)
Q Consensus 373 ka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~ 452 (1170)
.|..+.++.+|.|...+.... .......+-++.|+.++||||++|++++.+
T Consensus 30 ~~t~k~~~~~vsVF~~~~~~~--~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~--------------------------- 80 (690)
T KOG1243|consen 30 DGTRKADGGPVSVFVYKRSNG--EVTELAKRAVKRLKTLRHPNILSYLDTTEE--------------------------- 80 (690)
T ss_pred ccceeccCCceEEEEEeCCCc--hhhHHHHHHHHHhhhccCchhhhhhhhhcc---------------------------
Confidence 466778899999999886655 455667888999999999999999987732
Q ss_pred cccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCceeecCCCC
Q 001059 453 SSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARND 531 (1170)
Q Consensus 453 ~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH-s~gIiHrDLKp~NILi~~~~~ 531 (1170)
...+|||+|-+-. |..++.+ +....+...++||+.||.||| +.+++|++|.-+.|+++..|.
T Consensus 81 -------------~~~~ylvTErV~P-l~~~lk~---l~~~~v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~Ge 143 (690)
T KOG1243|consen 81 -------------EGTLYLVTERVRP-LETVLKE---LGKEEVCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGE 143 (690)
T ss_pred -------------cCceEEEeecccc-HHHHHHH---hHHHHHHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCc
Confidence 4578999999832 3333333 226667778899999999997 678999999999999999999
Q ss_pred EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhcCCCchhH
Q 001059 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAME 611 (1170)
Q Consensus 532 vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltPf~~~~~ 611 (1170)
.||++|-+++....... ......---.|..|+.+.. ..-..|.|-|||++||++.++.....
T Consensus 144 WkLggle~v~~~~~~~~---------------~~~~~~~~~s~~~P~~~~~---s~~s~D~~~Lg~li~el~ng~~~~~~ 205 (690)
T KOG1243|consen 144 WKLGGLELVSKASGFNA---------------PAKSLYLIESFDDPEEIDP---SEWSIDSWGLGCLIEELFNGSLLTKT 205 (690)
T ss_pred EEEeeeEEEeccccCCc---------------ccccchhhhcccChhhcCc---cccchhhhhHHHHHHHHhCcccCcch
Confidence 99999998864321100 0011111223556664433 12457999999999999975322211
Q ss_pred HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH-----hccCCCCchHHH
Q 001059 612 RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL-----QDALPPQMEYEL 670 (1170)
Q Consensus 612 ~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL-----~~~~~~~~~~~~ 670 (1170)
. +...+.+| .....+-.+-+...+..||.....+ -|.||++...+.
T Consensus 206 ~------~~~~~~ip-------k~~~~~~~k~~~~~~~~r~n~~~~~~~~~~~~gff~n~fvd~ 256 (690)
T KOG1243|consen 206 D------LSNTGKIP-------KALIELYCKKLGATELKRPNKLRFILECRLLGGFFRNDFVDT 256 (690)
T ss_pred h------hhccCccc-------hhHHHHHHHHhccccccccchhhHHHHHHhccccccchHHHH
Confidence 1 11122222 1223334344455566676644433 366777665443
|
|
| >PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed | Back alignment and domain information |
|---|
Probab=99.11 E-value=1.2e-10 Score=141.28 Aligned_cols=155 Identities=19% Similarity=0.298 Sum_probs=92.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----------------------------h----hhHHHH
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----------------------------L----PVNDRI 401 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~----------------------------~----~~~~~~ 401 (1170)
..+|+. +.||+|++|+||+|+.+.+|+.||||+++..-.. . +..+.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 456776 7899999999999999977999999999743100 0 111222
Q ss_pred HHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cH
Q 001059 402 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TL 480 (1170)
Q Consensus 402 ~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL 480 (1170)
.+|+...+.. +|+.++...|...... ......| .....-++|||||.| .+
T Consensus 198 ~~ElD~~~Ea--~N~~~~~~~f~~~~~v-~VP~v~~--------------------------d~st~~VLvmE~i~G~~l 248 (537)
T PRK04750 198 HDELDLMREA--ANASQLRRNFEDSDML-YVPEVYW--------------------------DYCSETVMVMERMYGIPV 248 (537)
T ss_pred HHhhCHHHHH--HHHHHHHHHccCCCCe-ecceeec--------------------------ccCCCceEEEeeecCccH
Confidence 2333332222 2333332222100000 0000000 012335799999986 66
Q ss_pred HHH--HHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCC----CEEEeecCcchhccc
Q 001059 481 RQV--FESYD----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKL 545 (1170)
Q Consensus 481 ~~~--l~~~~----~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~ 545 (1170)
.++ +...+ .+.+..+..++.|++ ..|++|+|+||.||+++.++ .+++.|||++..++.
T Consensus 249 ~d~~~l~~~g~d~~~la~~~v~~~~~Qif-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 249 SDVAALRAAGTDMKLLAERGVEVFFTQVF-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HhHHHHHhcCCCHHHHHHHHHHHHHHHHH-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 653 33322 233444444555544 58999999999999999888 999999999987643
|
|
| >cd05151 ChoK Choline Kinase (ChoK) | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.3e-10 Score=118.92 Aligned_cols=127 Identities=17% Similarity=0.141 Sum_probs=93.5
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCcee-EEEEEeecCccccCCCCCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR-YYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~-l~~~~~e~~~~~~~~~~~~~ 438 (1170)
++.|+.|.++.||+++.. |..|++|+...... ....+.+|+.+++.+.+.++++ ++...
T Consensus 3 ~~~l~~G~~~~vy~~~~~--~~~~~lK~~~~~~~---~~~~~~~E~~~l~~l~~~~~~P~~~~~~--------------- 62 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA--NKKYVVRIPGNGTE---LLINRENEAENSKLAAEAGIGPKLYYFD--------------- 62 (170)
T ss_pred eeecCCcccCceEEEEEC--CeEEEEEeCCCCcc---cccCHHHHHHHHHHHHHhCCCCceEEEe---------------
Confidence 467899999999999875 88899998753321 1224678999999997666543 44221
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc---
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI--- 514 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI--- 514 (1170)
...-++||||++| ++... . .....++.+++.+|+.||+.++
T Consensus 63 ---------------------------~~~~~lv~e~i~G~~l~~~----~----~~~~~~~~~l~~~l~~LH~~~~~~~ 107 (170)
T cd05151 63 ---------------------------PETGVLITEFIEGSELLTE----D----FSDPENLEKIAKLLKKLHSSPLPDL 107 (170)
T ss_pred ---------------------------CCCCeEEEEecCCCccccc----c----ccCHHHHHHHHHHHHHHhCCCCCCc
Confidence 0113799999987 44332 0 1123456799999999999985
Q ss_pred --cccCCCCCceeecCCCCEEEeecCcchh
Q 001059 515 --IHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 515 --iHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+|+|++|.||+++ ++.++++|||.+..
T Consensus 108 ~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 108 VPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred eeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 9999999999999 67899999999863
|
The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph |
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1170 | ||||
| 1zyc_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 1e-47 | ||
| 1zy4_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 7e-47 | ||
| 1zxe_A | 303 | Crystal Structure Of Eif2alpha Protein Kinase Gcn2: | 5e-44 | ||
| 3qd2_B | 332 | Crsytal Structure Of Mouse Perk Kinase Domain Lengt | 5e-40 | ||
| 4g31_A | 299 | Crystal Structure Of Gsk6414 Bound To Perk (R587-R1 | 2e-39 | ||
| 3uiu_A | 306 | Crystal Structure Of Apo-Pkr Kinase Domain Length = | 5e-30 | ||
| 2a19_B | 284 | Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng | 1e-27 | ||
| 4g84_A | 464 | Crystal Structure Of Human Hisrs Length = 464 | 1e-26 | ||
| 4g85_A | 517 | Crystal Structure Of Human Hisrs Length = 517 | 2e-26 | ||
| 4apc_A | 350 | Crystal Structure Of Human Nima-Related Kinase 1 (N | 7e-21 | ||
| 3p1a_A | 311 | Structure Of Human Membrane-Associated Tyrosine- An | 9e-21 | ||
| 3i79_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 8e-17 | ||
| 3ma6_A | 298 | Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr | 9e-17 | ||
| 3ku2_A | 507 | Crystal Structure Of Inactivated Form Of Cdpk1 From | 1e-16 | ||
| 3hx4_A | 508 | Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg | 1e-16 | ||
| 3i7c_A | 484 | Calcium-Dependent Protein Kinase 1 From Toxoplasma | 2e-16 | ||
| 3lij_A | 494 | Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) | 5e-16 | ||
| 3pxf_A | 306 | Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N | 5e-16 | ||
| 4erw_A | 306 | Cdk2 In Complex With Staurosporine Length = 306 | 6e-16 | ||
| 2w5a_A | 279 | Human Nek2 Kinase Adp-Bound Length = 279 | 8e-16 | ||
| 2jav_A | 279 | Human Kinase With Pyrrole-Indolinone Ligand Length | 8e-16 | ||
| 1h4l_A | 292 | Structure And Regulation Of The Cdk5-P25(Nck5a) Com | 9e-16 | ||
| 3zgw_A | 347 | Crystal Structure Of Maternal Embryonic Leucine Zip | 1e-15 | ||
| 3dxn_A | 287 | Crystal Structure Of The Calcium-dependent Kinase F | 1e-15 | ||
| 3hzt_A | 467 | Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4 | 2e-15 | ||
| 1ung_A | 292 | Structural Mechanism For The Inhibition Of Cdk5-P25 | 3e-15 | ||
| 3ezr_A | 300 | Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ | 3e-15 | ||
| 4a4x_A | 279 | Nek2-Ede Bound To Cct248662 Length = 279 | 3e-15 | ||
| 3pj8_A | 299 | Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D] | 3e-15 | ||
| 3qhr_A | 298 | Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic | 3e-15 | ||
| 4eom_A | 301 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 4e-15 | ||
| 2jgz_A | 289 | Crystal Structure Of Phospho-Cdk2 In Complex With C | 4e-15 | ||
| 2w17_A | 299 | Cdk2 In Complex With The Imidazole Pyrimidine Amide | 4e-15 | ||
| 1e9h_A | 297 | Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex | 4e-15 | ||
| 1fin_A | 298 | Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = | 4e-15 | ||
| 3rp9_A | 458 | Crystal Structure Of The Apo Mapk From Toxoplasma G | 4e-15 | ||
| 4eon_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum | 4e-15 | ||
| 4eoq_A | 301 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 4e-15 | ||
| 4bcq_A | 301 | Structure Of Cdk2 In Complex With Cyclin A And A 2- | 4e-15 | ||
| 1w98_A | 298 | The Structural Basis Of Cdk2 Activation By Cyclin E | 4e-15 | ||
| 1qmz_A | 299 | Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com | 4e-15 | ||
| 4eos_A | 300 | Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co | 4e-15 | ||
| 3bht_A | 300 | Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN | 4e-15 | ||
| 1h1p_A | 303 | Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP | 4e-15 | ||
| 4eop_A | 300 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 4e-15 | ||
| 1ogu_A | 302 | Structure Of Human Thr160-phospho Cdk2/cyclin A Com | 4e-15 | ||
| 1vyw_A | 309 | Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = | 4e-15 | ||
| 4eoo_A | 299 | Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 | 4e-15 | ||
| 1jst_A | 298 | Phosphorylated Cyclin-Dependent Kinase-2 Bound To C | 4e-15 | ||
| 2iw8_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82 | 4e-15 | ||
| 4i3z_A | 296 | Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES | 4e-15 | ||
| 1gz8_A | 299 | Human Cyclin Dependent Kinase 2 Complexed With The | 5e-15 | ||
| 4eoj_A | 302 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 6e-15 | ||
| 1pf8_A | 298 | Crystal Structure Of Human Cyclin-dependent Kinase | 6e-15 | ||
| 4eok_A | 300 | Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma | 6e-15 | ||
| 2iw6_A | 302 | Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com | 6e-15 | ||
| 1gii_A | 298 | Human Cyclin Dependent Kinase 2 Complexed With The | 7e-15 | ||
| 4eoi_A | 299 | Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc | 8e-15 | ||
| 1oit_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 8e-15 | ||
| 1oir_A | 299 | Imidazopyridines: A Potent And Selective Class Of C | 1e-14 | ||
| 1h01_A | 298 | Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili | 1e-14 | ||
| 3igo_A | 486 | Crystal Structure Of Cryptosporidium Parvum Cdpk1, | 2e-14 | ||
| 2r0u_A | 323 | Crystal Structure Of Chek1 In Complex With Inhibito | 2e-14 | ||
| 2br1_A | 297 | Structure-Based Design Of Novel Chk1 Inhibitors: In | 3e-14 | ||
| 1ia8_A | 289 | The 1.7 A Crystal Structure Of Human Cell Cycle Che | 3e-14 | ||
| 1zlt_A | 295 | Crystal Structure Of Chk1 Complexed With A Hymenald | 3e-14 | ||
| 1zys_A | 273 | Co-Crystal Structure Of Checkpoint Kinase Chk1 With | 3e-14 | ||
| 2hog_A | 322 | Crystal Structure Of Chek1 In Complex With Inhibito | 4e-14 | ||
| 2ayp_A | 269 | Crystal Structure Of Chk1 With An Indol Inhibitor L | 5e-14 | ||
| 2x8e_A | 276 | Discovery Of A Novel Class Of Triazolones As Checkp | 5e-14 | ||
| 2wei_A | 287 | Crystal Structure Of The Kinase Domain Of Cryptospo | 5e-14 | ||
| 3dfa_A | 286 | Crystal Structure Of Kinase Domain Of Calcium-depen | 5e-14 | ||
| 4eqm_A | 294 | Structural Analysis Of Staphylococcus Aureus Serine | 6e-14 | ||
| 4fsm_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-14 | ||
| 4fsw_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-14 | ||
| 4fsn_A | 278 | Crystal Structure Of The Chk1 Length = 278 | 7e-14 | ||
| 4ft3_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 7e-14 | ||
| 2ydj_A | 276 | Discovery Of Checkpoint Kinase Inhibitor Azd7762 By | 7e-14 | ||
| 2ghg_A | 269 | H-Chk1 Complexed With A431994 Length = 269 | 8e-14 | ||
| 3jvr_A | 271 | Characterization Of The Chk1 Allosteric Inhibitor B | 8e-14 | ||
| 2e9v_A | 268 | Structure Of H-Chk1 Complexed With A859017 Length = | 8e-14 | ||
| 4fst_A | 269 | Crystal Structure Of The Chk1 Length = 269 | 8e-14 | ||
| 3ot3_A | 273 | X-Ray Crystal Structure Of Compound 22k Bound To Hu | 8e-14 | ||
| 3eb0_A | 383 | Crystal Structure Of Cgd4_240 From Cryptosporidium | 9e-14 | ||
| 4fsz_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-13 | ||
| 4fsy_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 1e-13 | ||
| 4fsu_A | 279 | Crystal Structure Of The Chk1 Length = 279 | 2e-13 | ||
| 2y94_A | 476 | Structure Of An Active Form Of Mammalian Ampk Lengt | 2e-13 | ||
| 3f61_A | 311 | Crystal Structure Of M. Tuberculosis Pknb Leu33aspV | 3e-13 | ||
| 3ori_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain L33d | 3e-13 | ||
| 3f69_A | 311 | Crystal Structure Of The Mycobacterium Tuberculosis | 4e-13 | ||
| 3n9x_A | 432 | Crystal Structure Of Map Kinase From Plasmodium Ber | 4e-13 | ||
| 3gc9_A | 370 | The Structure Of P38beta C119s, C162s In Complex Wi | 6e-13 | ||
| 3dae_A | 283 | Crystal Structure Of Phosphorylated Snf1 Kinase Dom | 7e-13 | ||
| 3hyh_A | 275 | Crystal Structure Of The Protein Kinase Domain Of Y | 7e-13 | ||
| 1zmw_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 9e-13 | ||
| 2r0i_A | 327 | Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len | 9e-13 | ||
| 1zmu_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 9e-13 | ||
| 2f9g_A | 353 | Crystal Structure Of Fus3 Phosphorylated On Tyr182 | 1e-12 | ||
| 3vum_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M7 | 1e-12 | ||
| 2wzj_A | 327 | Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82 | 1e-12 | ||
| 2i6l_A | 320 | Crystal Structure Of Human Mitogen Activated Protei | 1e-12 | ||
| 2b9f_A | 353 | Crystal Structure Of Non-Phosphorylated Fus3 Length | 1e-12 | ||
| 3fe3_A | 328 | Crystal Structure Of The Kinase Mark3PAR-1: T211a-S | 1e-12 | ||
| 2qnj_A | 328 | Kinase And Ubiquitin-Associated Domains Of Mark3PAR | 1e-12 | ||
| 1x8b_A | 289 | Structure Of Human Wee1a Kinase: Kinase Domain Comp | 1e-12 | ||
| 2in6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd311839 Length | 1e-12 | ||
| 3bi6_A | 287 | Wee1 Kinase Complex With Inhibitor Pd352396 Length | 1e-12 | ||
| 2b9h_A | 353 | Crystal Structure Of Fus3 With A Docking Motif From | 1e-12 | ||
| 2z2w_A | 285 | Humand Wee1 Kinase Complexed With Inhibitor Pf03357 | 1e-12 | ||
| 3gc8_A | 370 | The Structure Of P38beta C162s In Complex With A Di | 2e-12 | ||
| 4aaa_A | 331 | Crystal Structure Of The Human Cdkl2 Kinase Domain | 2e-12 | ||
| 1zmv_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-12 | ||
| 3ttj_A | 464 | Crystal Structure Of Jnk3 Complexed With Cc-359, A | 2e-12 | ||
| 1cm8_A | 367 | Phosphorylated Map Kinase P38-Gamma Length = 367 | 3e-12 | ||
| 3gp0_A | 348 | Crystal Structure Of Human Mitogen Activated Protei | 3e-12 | ||
| 2pk9_A | 317 | Structure Of The Pho85-pho80 Cdk-cyclin Complex Of | 3e-12 | ||
| 4ic7_A | 442 | Crystal Structure Of The Erk5 Kinase Domain In Comp | 3e-12 | ||
| 1jnk_A | 423 | The C-Jun N-Terminal Kinase (Jnk3s) Complexed With | 4e-12 | ||
| 2yza_A | 276 | Crystal Structure Of Kinase Domain Of Human 5'-Amp- | 4e-12 | ||
| 3vul_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 4e-12 | ||
| 4b99_A | 398 | Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le | 4e-12 | ||
| 1ywr_A | 360 | Crystal Structure Analysis Of Inactive P38 Kinase D | 4e-12 | ||
| 1yw2_A | 360 | Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | 4e-12 | ||
| 3iec_A | 319 | Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K | 5e-12 | ||
| 3fi3_A | 364 | Crystal Structure Of Jnk3 With Indazole Inhibitor, | 5e-12 | ||
| 3orm_A | 311 | Mycobacterium Tuberculosis Pknb Kinase Domain D76a | 5e-12 | ||
| 2ghl_A | 348 | Mutant Mus Musculus P38 Kinase Domain In Complex Wi | 6e-12 | ||
| 1mru_A | 311 | Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob | 6e-12 | ||
| 4exu_A | 371 | Mapk13, Inactive Form Length = 371 | 7e-12 | ||
| 2h6d_A | 276 | Protein Kinase Domain Of The Human 5'-Amp-Activated | 7e-12 | ||
| 3kvx_A | 364 | Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le | 8e-12 | ||
| 1o6y_A | 299 | Catalytic Domain Of Pknb Kinase From Mycobacterium | 9e-12 | ||
| 3nie_A | 429 | Crystal Structure Of Pf11_0147 Length = 429 | 9e-12 | ||
| 3fv8_A | 355 | Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le | 1e-11 | ||
| 2hak_A | 328 | Catalytic And Ubiqutin-Associated Domains Of Mark1P | 1e-11 | ||
| 3vuk_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M5 | 1e-11 | ||
| 3coi_A | 353 | Crystal Structure Of P38delta Kinase Length = 353 | 1e-11 | ||
| 3gcp_A | 360 | Human P38 Map Kinase In Complex With Sb203580 Lengt | 1e-11 | ||
| 3vuh_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M3 | 1e-11 | ||
| 3q5i_A | 504 | Crystal Structure Of Pbanka_031420 Length = 504 | 1e-11 | ||
| 3py3_A | 380 | Crystal Structure Of Phosphorylated P38alpha Map Ki | 1e-11 | ||
| 2y8o_A | 362 | Crystal Structure Of Human P38alpha Complexed With | 1e-11 | ||
| 3vui_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 1e-11 | ||
| 1ove_A | 366 | The Structure Of P38 Alpha In Complex With A Dihydr | 1e-11 | ||
| 3niz_A | 311 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 1e-11 | ||
| 2r9s_A | 356 | C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu | 2e-11 | ||
| 2qkr_A | 313 | Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5 | 2e-11 | ||
| 3vug_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M2 | 2e-11 | ||
| 3tg1_A | 380 | Crystal Structure Of P38alpha In Complex With A Map | 2e-11 | ||
| 2baq_A | 365 | P38alpha Bound To Ro3201195 Length = 365 | 2e-11 | ||
| 1lew_A | 360 | Crystal Structure Of Map Kinase P38 Complexed To Th | 2e-11 | ||
| 3fi2_A | 353 | Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib | 2e-11 | ||
| 2fh9_A | 274 | Structure And Dimerization Of The Kinase Domain Fro | 2e-11 | ||
| 1v0o_A | 288 | Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho | 2e-11 | ||
| 1v0b_A | 288 | Crystal Structure Of The T198a Mutant Of Pfpk5 Leng | 2e-11 | ||
| 1bmk_A | 379 | The Complex Structure Of The Map Kinase P38SB218655 | 2e-11 | ||
| 1y8g_A | 327 | Catalytic And Ubiqutin-Associated Domains Of Mark2P | 2e-11 | ||
| 3v3v_A | 379 | Structural And Functional Analysis Of Quercetagetin | 2e-11 | ||
| 3elj_A | 369 | Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine | 2e-11 | ||
| 2bmc_A | 306 | Aurora-2 T287d T288d Complexed With Pha-680632 Leng | 2e-11 | ||
| 2bal_A | 365 | P38alpha Map Kinase Bound To Pyrazoloamine Length = | 2e-11 | ||
| 2gtm_A | 348 | Mutated Mouse P38 Map Kinase Domain In Complex With | 2e-11 | ||
| 1ob3_A | 288 | Structure Of P. Falciparum Pfpk5 Length = 288 | 2e-11 | ||
| 3p4k_A | 370 | The Third Conformation Of P38a Map Kinase Observed | 2e-11 | ||
| 2fsl_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a+f3 | 2e-11 | ||
| 2puu_A | 348 | Crystal Structure Of P38 Complex With 1-(5-Tert-But | 2e-11 | ||
| 1ukh_A | 369 | Structural Basis For The Selective Inhibition Of Jn | 2e-11 | ||
| 2xrw_A | 371 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-11 | ||
| 3e7o_A | 360 | Crystal Structure Of Jnk2 Length = 360 | 2e-11 | ||
| 3od6_X | 360 | Crystal Structure Of P38alpha Y323t Active Mutant L | 2e-11 | ||
| 2fso_X | 367 | Mitogen Activated Protein Kinase P38alpha (D176a) A | 2e-11 | ||
| 2wqm_A | 310 | Structure Of Apo Human Nek7 Length = 310 | 2e-11 | ||
| 3odz_X | 360 | Crystal Structure Of P38alpha Y323r Active Mutant L | 2e-11 | ||
| 3d83_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-11 | ||
| 3e92_A | 371 | Crystal Structure Of P38 Kinase In Complex With A B | 2e-11 | ||
| 4ewq_A | 383 | Human P38 Alpha Mapk In Complex With A Pyridazine B | 2e-11 | ||
| 2xs0_A | 386 | Linear Binding Motifs For Jnk And For Calcineurin A | 2e-11 | ||
| 2o0u_A | 364 | Crystal Structure Of Human Jnk3 Complexed With N-{3 | 2e-11 | ||
| 2fst_X | 367 | Mitogen Activated Protein Kinase P38alpha (d176a+f3 | 2e-11 | ||
| 3dt1_A | 383 | P38 Complexed With A Quinazoline Inhibitor Length = | 2e-11 | ||
| 3nnx_A | 354 | Crystal Structure Of Phosphorylated P38 Alpha In Co | 2e-11 | ||
| 3mn3_A | 271 | An Inhibited Conformation For The Protein Kinase Do | 2e-11 | ||
| 3ody_X | 360 | Crystal Structure Of P38alpha Y323q Active Mutant L | 2e-11 | ||
| 2npq_A | 367 | A Novel Lipid Binding Site In The P38 Alpha Map Kin | 2e-11 | ||
| 2v7o_A | 336 | Crystal Structure Of Human Calcium-Calmodulin-Depen | 2e-11 | ||
| 2oza_B | 366 | Structure Of P38alpha Complex Length = 366 | 2e-11 | ||
| 1di9_A | 360 | The Structure Of P38 Mitogen-Activated Protein Kina | 2e-11 | ||
| 2g01_A | 370 | Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit | 2e-11 | ||
| 3k3j_A | 362 | P38alpha Bound To Novel Dfg-Out Compound Pf-0041612 | 2e-11 | ||
| 2baj_A | 365 | P38alpha Bound To Pyrazolourea Length = 365 | 2e-11 | ||
| 3hrb_A | 359 | P38 Kinase Crystal Structure In Complex With Small | 2e-11 | ||
| 1bl6_A | 379 | The Complex Structure Of The Map Kinase P38SB216995 | 2e-11 | ||
| 3oef_X | 360 | Crystal Structure Of Y323f Inactive Mutant Of P38al | 3e-11 | ||
| 3vud_A | 370 | Crystal Structure Of A Cysteine-deficient Mutant M1 | 3e-11 | ||
| 1oz1_A | 372 | P38 Mitogen-Activated Kinase In Complex With 4-Azai | 3e-11 | ||
| 2gfs_A | 372 | P38 Kinase Crystal Structure In Complex With Ro3201 | 3e-11 | ||
| 3gcu_A | 360 | Human P38 Map Kinase In Complex With Rl48 Length = | 3e-11 | ||
| 3kq7_A | 380 | Structure Of Human P38alpha With N-[4-Methyl-3-(6-{ | 3e-11 | ||
| 3hvc_A | 362 | Crystal Structure Of Human P38alpha Map Kinase Leng | 3e-11 | ||
| 2lgc_A | 359 | Joint Nmr And X-Ray Refinement Reveals The Structur | 3e-11 | ||
| 3zsg_A | 362 | X-Ray Structure Of P38alpha Bound To Tak-715 Length | 3e-11 | ||
| 3mpt_A | 371 | Crystal Structure Of P38 Kinase In Complex With A P | 3e-11 | ||
| 1m7q_A | 366 | Crystal Structure Of P38 Map Kinase In Complex With | 3e-11 | ||
| 3o17_A | 370 | Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3 | 3e-11 | ||
| 3nnu_A | 354 | Crystal Structure Of P38 Alpha In Complex With Dp13 | 3e-11 | ||
| 3d7z_A | 360 | Crystal Structure Of P38 Kinase In Complex With A B | 3e-11 | ||
| 3fi4_A | 372 | P38 Kinase Crystal Structure In Complex With Ro4499 | 3e-11 | ||
| 3s3i_A | 349 | P38 Kinase Crystal Structure In Complex With Small | 3e-11 | ||
| 3hec_A | 348 | P38 In Complex With Imatinib Length = 348 | 3e-11 | ||
| 3k3i_A | 350 | P38alpha Bound To Novel Dgf-Out Compound Pf-0021595 | 3e-11 | ||
| 1zzl_A | 351 | Crystal Structure Of P38 With Triazolopyridine Leng | 3e-11 | ||
| 2bfy_A | 284 | Complex Of Aurora-B With Incenp And Hesperidin. Len | 4e-11 | ||
| 3unz_A | 279 | Aurora A In Complex With Rpm1679 Length = 279 | 4e-11 | ||
| 1pmn_A | 364 | Crystal Structure Of Jnk3 In Complex With An Imidaz | 4e-11 | ||
| 3ptg_A | 363 | Design And Synthesis Of A Novel, Orally Efficacious | 4e-11 | ||
| 1ian_A | 366 | Human P38 Map Kinase Inhibitor Complex Length = 366 | 4e-11 | ||
| 2ok1_A | 365 | Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3 | 4e-11 | ||
| 1fot_A | 318 | Structure Of The Unliganded Camp-Dependent Protein | 4e-11 | ||
| 3oxi_A | 362 | Design And Synthesis Of Disubstituted Thiophene And | 4e-11 | ||
| 2wtw_A | 285 | Aurora-A Inhibitor Structure (2nd Crystal Form) Len | 4e-11 | ||
| 3pze_A | 358 | Jnk1 In Complex With Inhibitor Length = 358 | 4e-11 | ||
| 4h36_A | 356 | Crystal Structure Of Jnk3 In Complex With Atf2 Pept | 4e-11 | ||
| 2j4z_A | 306 | Structure Of Aurora-2 In Complex With Pha-680626 Le | 5e-11 | ||
| 3r21_A | 271 | Design, Synthesis, And Biological Evaluation Of Pyr | 5e-11 | ||
| 2b1p_A | 355 | Inhibitor Complex Of Jnk3 Length = 355 | 5e-11 | ||
| 2exc_X | 356 | Inhibitor Complex Of Jnk3 Length = 356 | 5e-11 | ||
| 2wtv_A | 285 | Aurora-A Inhibitor Structure Length = 285 | 5e-11 | ||
| 2biy_A | 310 | Structure Of Pdk1-S241a Mutant Kinase Domain Length | 5e-11 | ||
| 3mh2_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 5e-11 | ||
| 3qbn_A | 281 | Structure Of Human Aurora A In Complex With A Diami | 6e-11 | ||
| 1omw_A | 689 | Crystal Structure Of The Complex Between G Protein- | 6e-11 | ||
| 3psc_A | 695 | Bovine Grk2 In Complex With Gbetagamma Subunits Len | 6e-11 | ||
| 3coh_A | 268 | Crystal Structure Of Aurora-A In Complex With A Pen | 6e-11 | ||
| 1muo_A | 297 | Crystal Structure Of Aurora-2, An Oncogenic Serine- | 7e-11 | ||
| 1z5m_A | 286 | Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr | 7e-11 | ||
| 3pwy_A | 311 | Crystal Structure Of An Extender (Spd28345)-Modifie | 7e-11 | ||
| 3nrm_A | 283 | Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito | 7e-11 | ||
| 2j50_A | 280 | Structure Of Aurora-2 In Complex With Pha-739358 Le | 7e-11 | ||
| 3npc_A | 364 | Crystal Structure Of Jnk2 Complexed With Birb796 Le | 7e-11 | ||
| 1h1w_A | 289 | High Resolution Crystal Structure Of The Human Pdk1 | 7e-11 | ||
| 3jy9_A | 311 | Janus Kinase 2 Inhibitors Length = 311 | 7e-11 | ||
| 3cik_A | 689 | Human Grk2 In Complex With Gbetagamma Subunits Leng | 8e-11 | ||
| 3qc4_A | 314 | Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = | 8e-11 | ||
| 3io7_A | 313 | 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Sel | 8e-11 | ||
| 3krw_A | 688 | Human Grk2 In Complex With Gbetgamma Subunits And B | 8e-11 | ||
| 3nus_A | 286 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra | 8e-11 | ||
| 2x6d_A | 285 | Aurora-A Bound To An Inhibitor Length = 285 | 8e-11 | ||
| 1uu9_A | 286 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 8e-11 | ||
| 2xng_A | 283 | Structure Of Aurora-A Bound To A Selective Imidazop | 8e-11 | ||
| 2xru_A | 280 | Aurora-A T288e Complexed With Pha-828300 Length = 2 | 9e-11 | ||
| 4a07_A | 311 | Human Pdk1 Kinase Domain In Complex With Allosteric | 1e-10 | ||
| 3oht_A | 389 | Crystal Structure Of Salmo Salar P38alpha Length = | 1e-10 | ||
| 3mtl_A | 324 | Crystal Structure Of The Pctaire1 Kinase In Complex | 1e-10 | ||
| 3hrc_A | 311 | Crystal Structure Of A Mutant Of Human Pdk1 Kinase | 1e-10 | ||
| 1ol5_A | 282 | Structure Of Aurora-A 122-403, Phosphorylated On Th | 1e-10 | ||
| 2c6e_A | 283 | Aurora A Kinase Activated Mutant (T287d) In Complex | 1e-10 | ||
| 3lau_A | 287 | Crystal Structure Of Aurora2 Kinase In Complex With | 1e-10 | ||
| 1mq4_A | 272 | Crystal Structure Of Aurora-A Protein Kinase Length | 1e-10 | ||
| 2r7b_A | 312 | Crystal Structure Of The Phosphoinositide-Dependent | 1e-10 | ||
| 3fdn_A | 279 | Structure-Based Drug Design Of Novel Aurora Kinase | 1e-10 | ||
| 3h0y_A | 268 | Aurora A In Complex With A Bisanilinopyrimidine Len | 1e-10 | ||
| 3rwp_A | 311 | Discovery Of A Novel, Potent And Selective Inhibito | 1e-10 | ||
| 3o50_A | 267 | Crystal Structure Of Benzamide 9 Bound To Auroraa L | 1e-10 | ||
| 2xch_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 1e-10 | ||
| 1uu3_A | 310 | Structure Of Human Pdk1 Kinase Domain In Complex Wi | 1e-10 | ||
| 3sc1_A | 311 | Novel Isoquinolone Pdk1 Inhibitors Discovered Throu | 1e-10 | ||
| 2vrx_A | 285 | Structure Of Aurora B Kinase In Complex With Zm4474 | 1e-10 | ||
| 2w1d_A | 275 | Structure Determination Of Aurora Kinase In Complex | 1e-10 | ||
| 3iop_A | 312 | Pdk-1 In Complex With The Inhibitor Compound-8i Len | 1e-10 | ||
| 3h9o_A | 311 | Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) | 2e-10 | ||
| 4agu_A | 311 | Crystal Structure Of The Human Cdkl1 Kinase Domain | 2e-10 | ||
| 2bfx_B | 284 | Mechanism Of Aurora-B Activation By Incenp And Inhi | 2e-10 | ||
| 2c6d_A | 275 | Aurora A Kinase Activated Mutant (T287d) In Complex | 2e-10 | ||
| 3daj_A | 272 | Crystal Structure Of Aurora A Complexed With An Inh | 2e-10 | ||
| 3orx_A | 316 | Pdk1 Mutant Bound To Allosteric Disulfide Fragment | 2e-10 | ||
| 2dwb_A | 285 | Aurora-A Kinase Complexed With Amppnp Length = 285 | 2e-10 | ||
| 2zoq_A | 382 | Structural Dissection Of Human Mitogen-Activated Ki | 2e-10 | ||
| 3o8p_A | 360 | Conformational Plasticity Of P38 Map Kinase Dfg Mot | 2e-10 | ||
| 3gi3_A | 360 | Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana | 2e-10 | ||
| 3e5a_A | 268 | Crystal Structure Of Aurora A In Complex With Vx-68 | 2e-10 | ||
| 3nax_A | 311 | Pdk1 In Complex With Inhibitor Mp7 Length = 311 | 2e-10 | ||
| 3nun_A | 292 | Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea | 2e-10 | ||
| 2w1c_A | 275 | Structure Determination Of Aurora Kinase In Complex | 2e-10 | ||
| 3ha6_A | 268 | Crystal Structure Of Aurora A In Complex With Tpx2 | 2e-10 | ||
| 2vz6_A | 313 | Structure Of Human Calcium Calmodulin Dependent Pro | 2e-10 | ||
| 3mh0_A | 360 | Mutagenesis Of P38 Map Kinase Eshtablishes Key Role | 2e-10 | ||
| 3nay_A | 311 | Pdk1 In Complex With Inhibitor Mp6 Length = 311 | 2e-10 | ||
| 2wqe_A | 262 | Structure Of S155r Aurora-A Somatic Mutant Length = | 3e-10 | ||
| 1ol6_A | 282 | Structure Of Unphosphorylated D274n Mutant Of Auror | 3e-10 | ||
| 3mh3_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-10 | ||
| 2wel_A | 327 | Crystal Structure Of Su6656-Bound CalciumCALMODULIN | 3e-10 | ||
| 3mh1_A | 360 | Mutagenesis Of P38 Map Kinase Establishes Key Roles | 3e-10 | ||
| 2jc6_A | 334 | Crystal Structure Of Human Calmodulin-Dependent Pro | 3e-10 | ||
| 2vn9_A | 301 | Crystal Structure Of Human Calcium Calmodulin Depen | 3e-10 | ||
| 2bdw_A | 362 | Crystal Structure Of The Auto-Inhibited Kinase Doma | 3e-10 | ||
| 3dls_A | 335 | Crystal Structure Of Human Pas Kinase Bound To Adp | 4e-10 | ||
| 4af3_A | 292 | Human Aurora B Kinase In Complex With Incenp And Vx | 4e-10 | ||
| 2xne_A | 272 | Structure Of Aurora-A Bound To An Imidazopyrazine I | 4e-10 | ||
| 2xck_A | 309 | Crystal Structure Of Pdk1 In Complex With A Pyrazol | 4e-10 | ||
| 3d14_A | 272 | Crystal Structure Of Mouse Aurora A (Asn186->gly, L | 5e-10 | ||
| 3ggf_A | 301 | Crystal Structure Of Human SerineTHREONINE-Protein | 5e-10 | ||
| 3cok_A | 278 | Crystal Structure Of Plk4 Kinase Length = 278 | 6e-10 | ||
| 4bcf_A | 331 | Structure Of Cdk9 In Complex With Cyclin T And A 2- | 6e-10 | ||
| 4bc6_A | 293 | Crystal Structure Of Human Serine Threonine Kinase- | 6e-10 | ||
| 2j7t_A | 302 | Crystal Structure Of Human Serine Threonine Kinase- | 6e-10 | ||
| 2w9f_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 7e-10 | ||
| 3dak_A | 290 | Crystal Structure Of Domain-Swapped Osr1 Kinase Dom | 7e-10 | ||
| 2vwi_A | 303 | Structure Of The Osr1 Kinase, A Hypertension Drug T | 7e-10 | ||
| 3blh_A | 331 | Crystal Structure Of Human Cdk9CYCLINT1 Length = 33 | 8e-10 | ||
| 4e5a_X | 360 | The W197a Mutant Of P38a Map Kinase Length = 360 | 1e-09 | ||
| 4ec8_A | 373 | Structure Of Full Length Cdk9 In Complex With Cycli | 1e-09 | ||
| 2xa4_A | 298 | Inhibitors Of Jak2 Kinase Domain Length = 298 | 1e-09 | ||
| 1i09_A | 420 | Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len | 1e-09 | ||
| 1pyx_A | 422 | Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | 1e-09 | ||
| 1q5k_A | 414 | Crystal Structure Of Glycogen Synthase Kinase 3 In | 1e-09 | ||
| 3mi9_A | 351 | Crystal Structure Of Hiv-1 Tat Complexed With Human | 1e-09 | ||
| 1q3d_A | 424 | Gsk-3 Beta Complexed With Staurosporine Length = 42 | 1e-09 | ||
| 4acc_A | 465 | Gsk3b In Complex With Inhibitor Length = 465 | 1e-09 | ||
| 4e4m_A | 302 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-09 | ||
| 3ugc_A | 295 | Structural Basis Of Jak2 Inhibition By The Type Ii | 1e-09 | ||
| 3tjc_A | 298 | Co-Crystal Structure Of Jak2 With Thienopyridine 8 | 1e-09 | ||
| 3kl8_A | 269 | Camkiintide Inhibitor Complex Length = 269 | 1e-09 | ||
| 2w1i_A | 326 | Structure Determination Of Aurora Kinase In Complex | 1e-09 | ||
| 1r0e_A | 391 | Glycogen Synthase Kinase-3 Beta In Complex With 3-I | 1e-09 | ||
| 3q32_A | 301 | Structure Of Janus Kinase 2 With A Pyrrolotriazine | 1e-09 | ||
| 3kk8_A | 284 | Camkii Substrate Complex A Length = 284 | 1e-09 | ||
| 3e62_A | 293 | Fragment Based Discovery Of Jak-2 Inhibitors Length | 1e-09 | ||
| 3lpb_A | 295 | Crystal Structure Of Jak2 Complexed With A Potent 2 | 1e-09 | ||
| 3rvg_A | 303 | Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido | 2e-09 | ||
| 4hge_A | 300 | Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 | 2e-09 | ||
| 2b7a_A | 293 | The Structural Basis Of Janus Kinase 2 Inhibition B | 2e-09 | ||
| 4aqc_A | 301 | Triazolopyridine-Based Inhibitor Of Janus Kinase 2 | 2e-09 | ||
| 3soa_A | 444 | Full-Length Human Camkii Length = 444 | 2e-09 | ||
| 2o5k_A | 372 | Crystal Structure Of Gsk3beta In Complex With A Ben | 2e-09 | ||
| 3zhp_C | 294 | Human Mst3 (stk24) In Complex With Mo25beta Length | 2e-09 | ||
| 3l9m_A | 351 | Crystal Structure Of Pkab3 (Pka Triple Mutant V123a | 2e-09 | ||
| 3say_A | 430 | Crystal Structure Of Human Glycogen Synthase Kinase | 2e-09 | ||
| 3e3p_A | 360 | Glycogen Synthase Kinase From Leishmania Major Leng | 3e-09 | ||
| 4gsb_A | 364 | Monoclinic Crystal Form Of The Apo-Erk2 Length = 36 | 3e-09 | ||
| 3qyw_A | 364 | Crystal Structure Of Erk2 In Complex With An Inhibi | 3e-09 | ||
| 3zu7_A | 365 | Crystal Structure Of A Designed Selected Ankyrin Re | 3e-09 | ||
| 3sd0_A | 350 | Identification Of A Glycogen Synthase Kinase-3b Inh | 3e-09 | ||
| 2z7l_A | 366 | Unphosphorylated Mitogen Activated Protein Kinase E | 3e-09 | ||
| 3c9w_A | 357 | Crystal Structure Of Erk-2 With Hypothemycin Covale | 3e-09 | ||
| 2fys_B | 364 | Crystal Structure Of Erk2 Complex With Kim Peptide | 3e-09 | ||
| 3o71_A | 358 | Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length | 3e-09 | ||
| 3r63_A | 358 | Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | 3e-09 | ||
| 3ama_A | 351 | Protein Kinase A Sixfold Mutant Model Of Aurora B W | 3e-09 | ||
| 3kn5_A | 325 | Crystal Structure Of The C-Terminal Kinase Domain O | 3e-09 | ||
| 3is5_A | 285 | Crystal Structure Of Cdpk Kinase Domain From Toxopl | 3e-09 | ||
| 3zuv_A | 364 | Crystal Structure Of A Designed Selected Ankyrin Re | 4e-09 | ||
| 2erk_A | 365 | Phosphorylated Map Kinase Erk2 Length = 365 | 4e-09 | ||
| 4dit_A | 382 | Crystal Structure Of Gsk3beta In Complex With A Imi | 4e-09 | ||
| 3kk9_A | 282 | Camkii Substrate Complex B Length = 282 | 4e-09 | ||
| 2gph_A | 364 | Docking Motif Interactions In The Map Kinase Erk2 L | 4e-09 | ||
| 3lxn_A | 318 | Structural And Thermodynamic Characterization Of Th | 4e-09 | ||
| 1gng_A | 378 | Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With | 4e-09 | ||
| 4afj_A | 367 | 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec | 4e-09 | ||
| 3zrk_A | 371 | Identification Of 2-(4-Pyridyl)thienopyridinones As | 5e-09 | ||
| 3bhh_A | 295 | Crystal Structure Of Human Calcium/calmodulin-depen | 5e-09 | ||
| 2w96_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 5e-09 | ||
| 3g33_A | 308 | Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | 5e-09 | ||
| 4ae6_A | 343 | Structure And Function Of The Human Sperm-specific | 5e-09 | ||
| 3p23_A | 432 | Crystal Structure Of The Human Kinase And Rnase Dom | 5e-09 | ||
| 3nx8_A | 351 | Human Camp Dependent Protein Kinase In Complex With | 5e-09 | ||
| 1xh9_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 5e-09 | ||
| 3agm_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 6e-09 | ||
| 3agl_A | 351 | Complex Of Pka With The Bisubstrate Protein Kinase | 6e-09 | ||
| 3a7f_A | 303 | Human Mst3 Kinase Length = 303 | 6e-09 | ||
| 3oz6_A | 388 | Crystal Structure Of Mapk From Cryptosporidium Parv | 6e-09 | ||
| 1gol_A | 364 | Coordinates Of Rat Map Kinase Erk2 With An Arginine | 6e-09 | ||
| 2w99_B | 306 | Crystal Structure Of Cdk4 In Complex With A D-Type | 6e-09 | ||
| 4fux_A | 360 | Crystal Structure Of The Erk2 Complexed With E75 Le | 6e-09 | ||
| 3mvj_A | 371 | Human Cyclic Amp-Dependent Protein Kinase Pka Inhib | 6e-09 | ||
| 3c4c_A | 280 | B-Raf Kinase In Complex With Plx4720 Length = 280 | 6e-09 | ||
| 2y9q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 6e-09 | ||
| 4ae9_A | 343 | Structure And Function Of The Human Sperm-specific | 6e-09 | ||
| 3gb2_A | 353 | Gsk3beta Inhibitor Complex Length = 353 | 7e-09 | ||
| 4fk3_A | 292 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-09 | ||
| 4fv6_A | 360 | Crystal Structure Of The Erk2 Complexed With E57 Le | 7e-09 | ||
| 4fv7_A | 360 | Crystal Structure Of The Erk2 Complexed With E94 Le | 7e-09 | ||
| 2ow3_A | 352 | Glycogen Synthase Kinase-3 Beta In Complex With Bis | 7e-09 | ||
| 3og7_A | 289 | B-Raf Kinase V600e Oncogenic Mutant In Complex With | 7e-09 | ||
| 1wzy_A | 368 | Crystal Structure Of Human Erk2 Complexed With A Py | 7e-09 | ||
| 1tvo_A | 368 | The Structure Of Erk2 In Complex With A Small Molec | 7e-09 | ||
| 4bbe_A | 298 | Aminoalkylpyrimidine Inhibitor Complexes With Jak2 | 7e-09 | ||
| 4e6d_A | 298 | Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex W | 7e-09 | ||
| 2z7q_A | 321 | Crystal Structure Of The N-Terminal Kinase Domain O | 8e-09 | ||
| 3sa0_A | 360 | Complex Of Erk2 With Norathyriol Length = 360 | 8e-09 | ||
| 3f7z_A | 350 | X-ray Co-crystal Structure Of Glycogen Synthase Kin | 8e-09 | ||
| 2ojg_A | 380 | Crystal Structure Of Erk2 In Complex With N,n-dimet | 8e-09 | ||
| 3zdi_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 9e-09 | ||
| 3sdj_A | 448 | Structure Of Rnase-Inactive Point Mutant Of Oligome | 9e-09 | ||
| 1h8f_A | 352 | Glycogen Synthase Kinase 3 Beta. Length = 352 | 9e-09 | ||
| 3f88_A | 349 | Glycogen Synthase Kinase 3beta Inhibitor Complex Le | 9e-09 | ||
| 1ua2_A | 346 | Crystal Structure Of Human Cdk7 Length = 346 | 1e-08 | ||
| 3fbv_A | 448 | Crystal Structure Of The Oligomer Formed By The Kin | 1e-08 | ||
| 2jam_A | 304 | Crystal Structure Of Human Calmodulin-Dependent Pro | 1e-08 | ||
| 2jdt_A | 351 | Structure Of Pka-Pkb Chimera Complexed With Isoquin | 1e-08 | ||
| 1uv5_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With 6-Br | 1e-08 | ||
| 2w4o_A | 349 | Crystal Structure Of Human Camk4 In Complex With 4- | 1e-08 | ||
| 2vo0_A | 351 | Structure Of Pka-Pkb Chimera Complexed With C-(4-(4 | 1e-08 | ||
| 1q61_A | 350 | Pka Triple Mutant Model Of Pkb Length = 350 | 1e-08 | ||
| 2gnj_A | 350 | Pka Three Fold Mutant Model Of Rho-Kinase With Y-27 | 1e-08 | ||
| 1szm_A | 350 | Dual Binding Mode Of Bisindolylmaleimide 2 To Prote | 1e-08 | ||
| 2uvy_A | 351 | Structure Of Pka-pkb Chimera Complexed With Methyl- | 1e-08 | ||
| 1smh_A | 350 | Protein Kinase A Variant Complex With Completely Or | 1e-08 | ||
| 2gnf_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 1e-08 | ||
| 1u5q_A | 348 | Crystal Structure Of The Tao2 Kinase Domain: Activa | 2e-08 | ||
| 2gng_A | 350 | Protein Kinase A Fivefold Mutant Model Of Rho-Kinas | 2e-08 | ||
| 3hko_A | 345 | Crystal Structure Of A Cdpk Kinase Domain From Cryp | 2e-08 | ||
| 3h4j_B | 336 | Crystal Structure Of Pombe Ampk Kdaid Fragment Leng | 2e-08 | ||
| 2rio_A | 434 | Structure Of The Dual Enzyme Ire1 Reveals The Basis | 2e-08 | ||
| 3s95_A | 310 | Crystal Structure Of The Human Limk1 Kinase Domain | 2e-08 | ||
| 3gbz_A | 329 | Structure Of The Cmgc Cdk Kinase From Giardia Lambl | 2e-08 | ||
| 3d5w_A | 317 | Crystal Structure Of A Phosphorylated Polo-Like Kin | 2e-08 | ||
| 3d5u_A | 317 | Crystal Structure Of A Wildtype Polo-Like Kinase 1 | 2e-08 | ||
| 3d5v_A | 317 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-08 | ||
| 1cmk_E | 350 | Crystal Structures Of The Myristylated Catalytic Su | 2e-08 | ||
| 1cdk_A | 350 | Camp-Dependent Protein Kinase Catalytic Subunit (E. | 2e-08 | ||
| 1ctp_E | 350 | Structure Of The Mammalian Catalytic Subunit Of Cam | 2e-08 | ||
| 3nz0_A | 302 | Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3 | 2e-08 | ||
| 3db6_A | 301 | Crystal Structure Of An Activated (Thr->asp) Polo-L | 2e-08 | ||
| 1pme_A | 380 | Structure Of Penta Mutant Human Erk2 Map Kinase Com | 2e-08 | ||
| 2gcd_A | 309 | Tao2 Kinase Domain-Staurosporine Structure Length = | 3e-08 | ||
| 2f7e_E | 351 | Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu | 3e-08 | ||
| 4h3q_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 3e-08 | ||
| 2c1a_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 3e-08 | ||
| 3nyx_A | 302 | Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T | 3e-08 | ||
| 1svh_A | 350 | Crystal Structure Of Protein Kinase A In Complex Wi | 3e-08 | ||
| 1q24_A | 350 | Pka Double Mutant Model Of Pkb In Complex With Mgat | 3e-08 | ||
| 3ckw_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 3e-08 | ||
| 2uzt_A | 336 | Pka Structures Of Akt, Indazole-Pyridine Inhibitors | 3e-08 | ||
| 3dnd_A | 350 | Camp-Dependent Protein Kinase Pka Catalytic Subunit | 3e-08 | ||
| 1stc_E | 350 | Camp-Dependent Protein Kinase, Alpha-Catalytic Subu | 3e-08 | ||
| 4e7w_A | 394 | Structure Of Gsk3 From Ustilago Maydis Length = 394 | 3e-08 | ||
| 2r5t_A | 373 | Crystal Structure Of Inactive Serum And Glucocortic | 3e-08 | ||
| 3g51_A | 325 | Structural Diversity Of The Active Conformation Of | 3e-08 | ||
| 1o9u_A | 350 | Glycogen Synthase Kinase 3 Beta Complexed With Axin | 3e-08 | ||
| 4el9_A | 305 | Structure Of N-Terminal Kinase Domain Of Rsk2 With | 3e-08 | ||
| 3ubd_A | 304 | Structure Of N-Terminal Domain Of Rsk2 Kinase In Co | 3e-08 | ||
| 2jds_A | 351 | Structure Of Camp-Dependent Protein Kinase Complexe | 3e-08 | ||
| 3ckx_A | 304 | Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3 | 4e-08 | ||
| 1q8w_A | 350 | The Catalytic Subunit Of Camp-Dependent Protein Kin | 4e-08 | ||
| 1xh7_A | 350 | Crystal Structures Of Protein Kinase B Selective In | 4e-08 | ||
| 1bi8_A | 326 | Mechanism Of G1 Cyclin Dependent Kinase Inhibition | 4e-08 | ||
| 3mfr_A | 351 | Cask-4m Cam Kinase Domain, Native Length = 351 | 4e-08 | ||
| 2jed_A | 352 | The Crystal Structure Of The Kinase Domain Of The P | 4e-08 | ||
| 3tei_A | 362 | Crystal Structure Of Human Erk2 Complexed With A Ma | 4e-08 | ||
| 3v5q_A | 297 | Discovery Of A Selective Trk Inhibitor With Efficac | 4e-08 | ||
| 3uto_A | 573 | Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin- | 5e-08 | ||
| 1jow_B | 308 | Crystal Structure Of A Complex Of Human Cdk6 And A | 5e-08 | ||
| 3lj0_A | 434 | Ire1 Complexed With Adp And Quercetin Length = 434 | 5e-08 | ||
| 3com_A | 314 | Crystal Structure Of Mst1 Kinase Length = 314 | 5e-08 | ||
| 3nup_A | 307 | Cdk6 (Monomeric) In Complex With Inhibitor Length = | 6e-08 | ||
| 1s9i_A | 354 | X-Ray Structure Of The Human Mitogen-Activated Prot | 8e-08 | ||
| 1koa_A | 491 | Twitchin Kinase Fragment (C.Elegans), Autoregulated | 8e-08 | ||
| 2y4i_C | 395 | Ksr2-Mek1 Heterodimer Length = 395 | 9e-08 | ||
| 3ll6_A | 337 | Crystal Structure Of The Human Cyclin G Associated | 1e-07 | ||
| 3omv_A | 307 | Crystal Structure Of C-Raf (Raf-1) Length = 307 | 1e-07 | ||
| 4e1z_A | 291 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-07 | ||
| 2c30_A | 321 | Crystal Structure Of The Human P21-Activated Kinase | 1e-07 | ||
| 3fhi_A | 350 | Crystal Structure Of A Complex Between The Catalyti | 1e-07 | ||
| 4e4l_A | 302 | Jak1 Kinase (Jh1 Domain) In Complex With Compound 3 | 1e-07 | ||
| 4e20_A | 290 | Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda | 1e-07 | ||
| 1s9j_A | 341 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-07 | ||
| 2wtk_C | 305 | Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2 | 2e-07 | ||
| 3eyg_A | 290 | Crystal Structures Of Jak1 And Jak2 Inhibitor Compl | 2e-07 | ||
| 2qur_A | 350 | Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe | 2e-07 | ||
| 2p55_A | 333 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-07 | ||
| 2erz_E | 351 | Crystal Structure Of C-amp Dependent Kinase (pka) B | 2e-07 | ||
| 4g9r_A | 307 | B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr | 2e-07 | ||
| 3ii5_A | 306 | The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi | 2e-07 | ||
| 3idp_A | 300 | B-Raf V600e Kinase Domain In Complex With An Aminoi | 2e-07 | ||
| 3d4q_A | 307 | Pyrazole-Based Inhibitors Of B-Raf Kinase Length = | 2e-07 | ||
| 3orn_A | 307 | Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In | 2e-07 | ||
| 1j3h_A | 350 | Crystal Structure Of Apoenzyme Camp-Dependent Prote | 2e-07 | ||
| 3mbl_A | 328 | Crystal Structure Of The Human Mitogen-Activated Pr | 2e-07 | ||
| 3dv3_A | 322 | Mek1 With Pf-04622664 Bound Length = 322 | 2e-07 | ||
| 4dfy_A | 371 | Crystal Structure Of R194a Mutant Of Camp-Dependent | 2e-07 | ||
| 1rdq_E | 350 | Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of | 2e-07 | ||
| 1jbp_E | 350 | Crystal Structure Of The Catalytic Subunit Of Camp- | 2e-07 | ||
| 3qal_E | 350 | Crystal Structure Of Arg280ala Mutant Of Catalytic | 2e-07 | ||
| 3eqc_A | 360 | X-Ray Structure Of The Human Mitogen-Activated Prot | 2e-07 | ||
| 1bkx_A | 350 | A Binary Complex Of The Catalytic Subunit Of Camp-D | 2e-07 | ||
| 3qam_E | 350 | Crystal Structure Of Glu208ala Mutant Of Catalytic | 2e-07 | ||
| 3q96_A | 282 | B-Raf Kinase Domain In Complex With A Tetrahydronap | 2e-07 | ||
| 1syk_A | 350 | Crystal Structure Of E230q Mutant Of Camp-Dependent | 2e-07 | ||
| 2fb8_A | 281 | Structure Of The B-Raf Kinase Domain Bound To Sb-59 | 2e-07 | ||
| 2gu8_A | 337 | Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel | 2e-07 | ||
| 1fmo_E | 350 | Crystal Structure Of A Polyhistidine-Tagged Recombi | 2e-07 | ||
| 3o7l_B | 350 | Crystal Structure Of Phospholamban (1-19):pka C-Sub | 2e-07 | ||
| 4dbn_A | 284 | Crystal Structure Of The Kinase Domain Of Human B-R | 2e-07 | ||
| 1uwj_A | 276 | The Complex Of Mutant V599e B-raf And Bay439006 Len | 2e-07 | ||
| 4h58_A | 275 | Braf In Complex With Compound 3 Length = 275 | 2e-07 | ||
| 1uwh_A | 276 | The Complex Of Wild Type B-Raf And Bay439006 Length | 2e-07 | ||
| 4an2_A | 301 | Crystal Structures Of Human Mek1 With Carboxamide-B | 2e-07 | ||
| 2qcs_A | 350 | A Complex Structure Between The Catalytic And Regul | 2e-07 | ||
| 2xik_A | 294 | Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K | 3e-07 | ||
| 1o6l_A | 337 | Crystal Structure Of An Activated Akt/protein Kinas | 3e-07 | ||
| 4dg3_E | 371 | Crystal Structure Of R336a Mutant Of Camp-dependent | 3e-07 | ||
| 1l3r_E | 350 | Crystal Structure Of A Transition State Mimic Of Th | 3e-07 | ||
| 3pvb_A | 345 | Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca | 3e-07 | ||
| 3e87_A | 335 | Crystal Structures Of The Kinase Domain Of Akt2 In | 3e-07 | ||
| 1o6k_A | 336 | Structure Of Activated Form Of Pkb Kinase Domain S4 | 3e-07 | ||
| 1mrv_A | 339 | Crystal Structure Of An Inactive Akt2 Kinase Domain | 3e-07 | ||
| 1gzn_A | 335 | Structure Of Pkb Kinase Domain Length = 335 | 3e-07 | ||
| 1gzk_A | 315 | Molecular Mechanism For The Regulation Of Protein K | 3e-07 | ||
| 4dfx_E | 350 | Crystal Structure Of Myristoylated K7c Catalytic Su | 3e-07 | ||
| 2jdo_A | 342 | Structure Of Pkb-Beta (Akt2) Complexed With Isoquin | 3e-07 | ||
| 1apm_E | 350 | 2.0 Angstrom Refined Crystal Structure Of The Catal | 3e-07 | ||
| 1ydt_E | 350 | Structure Of Camp-Dependent Protein Kinase, Alpha-C | 3e-07 | ||
| 1xjd_A | 345 | Crystal Structure Of Pkc-Theta Complexed With Staur | 3e-07 | ||
| 3sls_A | 304 | Crystal Structure Of Human Mek-1 Kinase In Complex | 3e-07 | ||
| 4fie_A | 423 | Full-Length Human Pak4 Length = 423 | 4e-07 | ||
| 2cdz_A | 303 | Crystal Structure Of The Human P21-Activated Kinase | 4e-07 | ||
| 2q0n_A | 301 | Structure Of Human P21 Activating Kinase 4 (Pak4) I | 4e-07 | ||
| 2x4f_A | 373 | The Crystal Structure Of The Human Myosin Light Cha | 4e-07 | ||
| 3kb7_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 4e-07 | ||
| 2v5q_A | 315 | Crystal Structure Of Wild-type Plk-1 Kinase Domain | 4e-07 | ||
| 2x7f_A | 326 | Crystal Structure Of The Kinase Domain Of Human Tra | 4e-07 | ||
| 2yac_A | 311 | Crystal Structure Of Polo-Like Kinase 1 In Complex | 4e-07 | ||
| 2bva_A | 292 | Crystal Structure Of The Human P21-Activated Kinase | 4e-07 | ||
| 2ac5_A | 316 | Structure Of Human Mnk2 Kinase Domain Mutant D228g | 5e-07 | ||
| 2y7j_A | 365 | Structure Of Human Phosphorylase Kinase, Gamma 2 Le | 5e-07 | ||
| 2x4z_A | 296 | Crystal Structure Of The Human P21-Activated Kinase | 5e-07 | ||
| 3thb_A | 333 | Structure Of Plk1 Kinase Domain In Complex With A B | 5e-07 | ||
| 2ou7_A | 335 | Structure Of The Catalytic Domain Of Human Polo-Lik | 5e-07 | ||
| 2rku_A | 294 | Structure Of Plk1 In Complex With Bi2536 Length = 2 | 5e-07 | ||
| 4fif_A | 346 | Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid | 5e-07 | ||
| 2xuu_A | 334 | Crystal Structure Of A Dap-Kinase 1 Mutant Length = | 6e-07 | ||
| 3o96_A | 446 | Crystal Structure Of Human Akt1 With An Allosteric | 7e-07 | ||
| 3fme_A | 290 | Crystal Structure Of Human Mitogen-Activated Protei | 7e-07 | ||
| 4ejn_A | 446 | Crystal Structure Of Autoinhibited Form Of Akt1 In | 7e-07 | ||
| 2x0g_A | 334 | X-ray Structure Of A Dap-kinase Calmodulin Complex | 8e-07 | ||
| 2f2u_A | 402 | Crystal Structure Of The Rho-Kinase Kinase Domain L | 8e-07 | ||
| 3udb_A | 317 | Crystal Structure Of Snrk2.6 Length = 317 | 8e-07 | ||
| 3fhr_A | 336 | High Resolution Crystal Structure Of Mitogen-Activa | 8e-07 | ||
| 3r1n_A | 317 | Mk3 Kinase Bound To Compound 5b Length = 317 | 8e-07 | ||
| 3gu8_A | 295 | Crystal Structure Of Dapkl93g With N6-Cyclopentylad | 9e-07 | ||
| 3ppz_A | 309 | Crystal Structure Of Ctr1 Kinase Domain In Complex | 9e-07 | ||
| 3p86_A | 309 | Crystal Structure Of Ctr1 Kinase Domain Mutant D676 | 1e-06 | ||
| 3t8o_A | 543 | Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu | 1e-06 | ||
| 3c4x_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-06 | ||
| 2f57_A | 317 | Crystal Structure Of The Human P21-activated Kinase | 1e-06 | ||
| 3rny_A | 346 | Crystal Structure Of Human Rsk1 C-Terminal Kinase D | 1e-06 | ||
| 1yvj_A | 290 | Crystal Structure Of The Jak3 Kinase Domain In Comp | 1e-06 | ||
| 3qc9_A | 543 | Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4 | 1e-06 | ||
| 2yak_A | 285 | Structure Of Death-Associated Protein Kinase 1 (Dap | 1e-06 | ||
| 3vn9_A | 340 | Rifined Crystal Structure Of Non-Phosphorylated Map | 1e-06 | ||
| 2xzs_A | 312 | Death Associated Protein Kinase 1 Residues 1-312 Le | 1e-06 | ||
| 3c4w_A | 543 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-06 | ||
| 2w4j_A | 277 | X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | 1e-06 | ||
| 3dfc_B | 295 | Crystal Structure Of A Glycine-Rich Loop Mutant Of | 1e-06 | ||
| 1wvw_A | 278 | Crystal Structures Of Kinase Domain Of Dap Kinase I | 1e-06 | ||
| 3lm0_A | 327 | Crystal Structure Of Human SerineTHREONINE KINASE 1 | 1e-06 | ||
| 2w4k_A | 302 | X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | 1e-06 | ||
| 2wnt_A | 330 | Crystal Structure Of The Human Ribosomal Protein S6 | 1e-06 | ||
| 2y0a_A | 326 | Structure Of Dapk1 Construct Residues 1-304 Length | 1e-06 | ||
| 1ig1_A | 294 | 1.8a X-Ray Structure Of Ternary Complex Of A Cataly | 1e-06 | ||
| 3f5u_A | 295 | Crystal Structure Of The Death Associated Protein K | 1e-06 | ||
| 4hvd_A | 314 | Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h | 2e-06 | ||
| 1p4f_A | 293 | Death Associated Protein Kinase Catalytic Domain Wi | 2e-06 | ||
| 3v8s_A | 410 | Human Rho-Associated Protein Kinase 1 (Rock 1) In C | 2e-06 | ||
| 3gu4_A | 295 | Crystal Structure Of Dapkq23v-Amppnp Length = 295 | 2e-06 | ||
| 3lxk_A | 327 | Structural And Thermodynamic Characterization Of Th | 2e-06 | ||
| 3pjc_A | 315 | Crystal Structure Of Jak3 Complexed With A Potent A | 2e-06 | ||
| 2esm_A | 415 | Crystal Structure Of Rock 1 Bound To Fasudil Length | 2e-06 | ||
| 2v55_A | 406 | Mechanism Of Multi-site Phosphorylation From A Rock | 2e-06 | ||
| 3uc3_A | 361 | The Crystal Structure Of Snf1-Related Kinase 2.3 Le | 2e-06 | ||
| 2dyl_A | 318 | Crystal Structure Of Human Mitogen-Activated Protei | 2e-06 | ||
| 3zuu_A | 362 | The Structure Of Ost1 (D160a, S175d) Kinase In Comp | 2e-06 | ||
| 3aln_A | 327 | Crystal Structure Of Human Non-Phosphorylated Mkk4 | 2e-06 | ||
| 2qr8_A | 342 | 2.0a X-ray Structure Of C-terminal Kinase Domain Of | 2e-06 | ||
| 3tac_A | 361 | Crystal Structure Of The Liprin-AlphaCASK COMPLEX L | 2e-06 | ||
| 3uc4_A | 362 | The Crystal Structure Of Snf1-Related Kinase 2.6 Le | 3e-06 | ||
| 3ujg_A | 361 | Crystal Structure Of Snrk2.6 In Complex With Hab1 L | 3e-06 | ||
| 1vzo_A | 355 | The Structure Of The N-Terminal Kinase Domain Of Ms | 3e-06 | ||
| 3c0g_A | 351 | Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len | 3e-06 | ||
| 2ac3_A | 316 | Structure Of Human Mnk2 Kinase Domain Length = 316 | 3e-06 | ||
| 3zut_A | 362 | The Structure Of Ost1 (D160a) Kinase Length = 362 | 4e-06 | ||
| 3a60_A | 327 | Crystal Structure Of Unphosphorylated P70s6k1 (Form | 4e-06 | ||
| 3f3z_A | 277 | Crystal Structure Of Cryptosporidium Parvum Calcium | 4e-06 | ||
| 2jfm_A | 325 | Crystal Structure Of Human Ste20-Like Kinase (Unlig | 5e-06 | ||
| 2qg5_A | 294 | Cryptosporidium Parvum Calcium Dependent Protein Ki | 5e-06 | ||
| 3a62_A | 327 | Crystal Structure Of Phosphorylated P70s6k1 Length | 5e-06 | ||
| 2j51_A | 325 | Crystal Structure Of Human Ste20-Like Kinase Bound | 5e-06 | ||
| 2hw6_A | 307 | Crystal Structure Of Mnk1 Catalytic Domain Length = | 5e-06 | ||
| 2r4b_A | 321 | Erbb4 Kinase Domain Complexed With A Thienopyrimidi | 5e-06 | ||
| 2jfl_A | 325 | Crystal Structure Of Human Ste20-Like Kinase ( Diph | 5e-06 | ||
| 3qfv_A | 415 | Mrck Beta In Complex With Tpca-1 Length = 415 | 6e-06 | ||
| 3enm_A | 316 | The Structure Of The Map2k Mek6 Reveals An Autoinhi | 6e-06 | ||
| 3tku_A | 433 | Mrck Beta In Complex With Fasudil Length = 433 | 7e-06 | ||
| 1phk_A | 298 | Two Structures Of The Catalytic Domain Of Phosphory | 7e-06 | ||
| 2phk_A | 277 | The Crystal Structure Of A Phosphorylase Kinase Pep | 7e-06 | ||
| 2nry_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 7e-06 | ||
| 1kob_A | 387 | Twitchin Kinase Fragment (Aplysia), Autoregulated P | 7e-06 | ||
| 4fr4_A | 384 | Crystal Structure Of Human SerineTHREONINE-Protein | 7e-06 | ||
| 2qr7_A | 342 | 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of | 8e-06 | ||
| 4gs6_A | 315 | Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz | 8e-06 | ||
| 1jpa_A | 312 | Crystal Structure Of Unphosphorylated Ephb2 Recepto | 8e-06 | ||
| 2eva_A | 307 | Structural Basis For The Interaction Of Tak1 Kinase | 9e-06 | ||
| 2nru_A | 307 | Crystal Structure Of Irak-4 Length = 307 | 9e-06 | ||
| 4gv1_A | 340 | Pkb Alpha In Complex With Azd5363 Length = 340 | 9e-06 | ||
| 3iw4_A | 360 | Crystal Structure Of Pkc Alpha In Complex With Nvp- | 9e-06 | ||
| 3nyn_A | 576 | Crystal Structure Of G Protein-Coupled Receptor Kin | 1e-05 | ||
| 4asz_A | 299 | Crystal Structure Of Apo Trkb Kinase Domain Length | 1e-05 | ||
| 3uib_A | 362 | Map Kinase Lmampk10 From Leishmania Major In Comple | 1e-05 | ||
| 3bbt_B | 328 | Crystal Structure Of The Erbb4 Kinase In Complex Wi | 1e-05 | ||
| 2acx_A | 576 | Crystal Structure Of G Protein Coupled Receptor Kin | 1e-05 | ||
| 2oib_A | 301 | Crystal Structure Of Irak4 Kinase Domain Apo Form L | 1e-05 | ||
| 1ql6_A | 298 | The Catalytic Mechanism Of Phosphorylase Kinase Pro | 1e-05 | ||
| 3pg1_A | 362 | Map Kinase Lmampk10 From Leishmania Major (1.95 Ang | 1e-05 | ||
| 2ycf_A | 322 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-05 | ||
| 3cqu_A | 342 | Crystal Structure Of Akt-1 Complexed With Substrate | 1e-05 | ||
| 2vd5_A | 412 | Structure Of Human Myotonic Dystrophy Protein Kinas | 1e-05 | ||
| 3ocb_A | 341 | Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor | 1e-05 | ||
| 3ka0_A | 320 | Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4 | 1e-05 | ||
| 2ycr_A | 323 | Crystal Structure Of Checkpoint Kinase 2 In Complex | 1e-05 | ||
| 2w0j_A | 323 | Crystal Structure Of Chk2 In Complex With Nsc 10955 | 1e-05 | ||
| 2xk9_A | 322 | Structural Analysis Of Checkpoint Kinase 2 (Chk2) I | 1e-05 | ||
| 2qok_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 1e-05 | ||
| 2cn5_A | 329 | Crystal Structure Of Human Chk2 In Complex With Adp | 2e-05 | ||
| 4fg7_A | 293 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-05 | ||
| 2onl_C | 406 | Crystal Structure Of The P38a-Mapkap Kinase 2 Heter | 2e-05 | ||
| 1kwp_A | 400 | Crystal Structure Of Mapkap2 Length = 400 | 2e-05 | ||
| 3a4o_X | 286 | Lyn Kinase Domain Length = 286 | 2e-05 | ||
| 2j90_A | 304 | Crystal Structure Of Human Zip Kinase In Complex Wi | 2e-05 | ||
| 3i6w_A | 443 | Structure And Activation Mechanism Of The Chk2 Dna- | 2e-05 | ||
| 2qob_A | 344 | Human Epha3 Kinase Domain, Base Structure Length = | 2e-05 | ||
| 2qoc_A | 344 | Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp | 2e-05 | ||
| 2o8y_A | 298 | Apo Irak4 Kinase Domain Length = 298 | 2e-05 | ||
| 2jiv_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 2e-05 | ||
| 4fg9_A | 320 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-05 | ||
| 2oza_A | 356 | Structure Of P38alpha Complex Length = 356 | 2e-05 | ||
| 3dzq_A | 361 | Human Epha3 Kinase Domain In Complex With Inhibitor | 2e-05 | ||
| 3sxr_A | 268 | Crystal Structure Of Bmx Non-Receptor Tyrosine Kina | 2e-05 | ||
| 3ika_A | 331 | Crystal Structure Of Egfr 696-1022 T790m Mutant Cov | 2e-05 | ||
| 4fg8_A | 315 | Crystal Structure Of Human Calcium/calmodulin-depen | 2e-05 | ||
| 1a06_A | 332 | Calmodulin-Dependent Protein Kinase From Rat Length | 2e-05 | ||
| 3r2b_A | 318 | Mk2 Kinase Bound To Compound 5b Length = 318 | 2e-05 | ||
| 2uv2_A | 287 | Crystal Structure Of Human Ste20-Like Kinase Bound | 2e-05 | ||
| 2qoo_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-05 | ||
| 3i6u_A | 419 | Structure And Activation Mechanism Of The Chk2 Dna- | 3e-05 | ||
| 3r2y_A | 319 | Mk2 Kinase Bound To Compound 1 Length = 319 | 3e-05 | ||
| 2qo7_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Dephos | 3e-05 | ||
| 3gok_A | 334 | Binding Site Mapping Of Protein Ligands Length = 33 | 3e-05 | ||
| 2gsf_A | 373 | The Human Epha3 Receptor Tyrosine Kinase And Juxtam | 3e-05 | ||
| 2p3g_X | 327 | Crystal Structure Of A Pyrrolopyridine Inhibitor Bo | 3e-05 | ||
| 3fxx_A | 371 | Human Epha3 Kinase And Juxtamembrane Region Bound T | 3e-05 | ||
| 3fpm_A | 325 | Crystal Structure Of A Squarate Inhibitor Bound To | 3e-05 | ||
| 1qcf_A | 454 | Crystal Structure Of Hck In Complex With A Src Fami | 3e-05 | ||
| 2pzy_A | 324 | Structure Of Mk2 Complexed With Compound 76 Length | 3e-05 | ||
| 2jbo_A | 326 | Protein Kinase Mk2 In Complex With An Inhibitor (Cr | 3e-05 | ||
| 2qof_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f | 3e-05 | ||
| 2qod_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y602f | 3e-05 | ||
| 4aw5_A | 291 | Complex Of The Ephb4 Kinase Domain With An Oxindole | 3e-05 | ||
| 4g5p_A | 330 | Crystal Structure Of Egfr Kinase T790m In Complex W | 3e-05 | ||
| 2jiu_A | 328 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 3e-05 | ||
| 2jit_A | 327 | Crystal Structure Of Egfr Kinase Domain T790m Mutat | 3e-05 | ||
| 3gop_A | 361 | Crystal Structure Of The Egf Receptor Juxtamembrane | 3e-05 | ||
| 2qon_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-05 | ||
| 2hen_A | 286 | Crystal Structure Of The Ephb2 Receptor Kinase Doma | 3e-05 | ||
| 2qoi_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596f: | 3e-05 | ||
| 4i24_A | 329 | Structure Of T790m Egfr Kinase Domain Co-crystalliz | 4e-05 | ||
| 2j5e_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 4e-05 | ||
| 2hk5_A | 270 | Hck Kinase In Complex With Lck Targetted Inhibitor | 4e-05 | ||
| 2qol_A | 373 | Human Epha3 Kinase And Juxtamembrane Region, Y596:y | 4e-05 | ||
| 4aw2_A | 437 | Crystal Structure Of Cdc42 Binding Protein Kinase A | 4e-05 | ||
| 2vwu_A | 302 | Ephb4 Kinase Domain Inhibitor Complex Length = 302 | 4e-05 | ||
| 3lzb_A | 327 | Egfr Kinase Domain Complexed With An Imidazo[2,1-B] | 5e-05 | ||
| 3u6j_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-05 | ||
| 3g2f_A | 336 | Crystal Structure Of The Kinase Domain Of Bone Morp | 5e-05 | ||
| 2p2h_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 5e-05 | ||
| 2j5f_A | 327 | Crystal Structure Of Egfr Kinase Domain In Complex | 5e-05 | ||
| 4g5j_A | 330 | Crystal Structure Of Egfr Kinase In Complex With Bi | 5e-05 | ||
| 2gs2_A | 330 | Crystal Structure Of The Active Egfr Kinase Domain | 5e-05 | ||
| 4i23_A | 329 | Crystal Structure Of The Wild-type Egfr Kinase Doma | 5e-05 | ||
| 3ewh_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 6e-05 | ||
| 2gs7_A | 330 | Crystal Structure Of The Inactive Egfr Kinase Domai | 6e-05 | ||
| 3vjo_A | 334 | Crystal Structure Of The Wild-Type Egfr Kinase Doma | 6e-05 | ||
| 1xkk_A | 352 | Egfr Kinase Domain Complexed With A Quinazoline Inh | 6e-05 | ||
| 1m14_A | 333 | Tyrosine Kinase Domain From Epidermal Growth Factor | 6e-05 | ||
| 4hjo_A | 337 | Crystal Structure Of The Inactive Egfr Tyrosine Kin | 7e-05 | ||
| 3rgf_A | 405 | Crystal Structure Of Human Cdk8CYCC Length = 405 | 7e-05 | ||
| 1f3m_C | 297 | Crystal Structure Of Human SerineTHREONINE KINASE P | 7e-05 | ||
| 2clq_A | 295 | Structure Of Mitogen-Activated Protein Kinase Kinas | 7e-05 | ||
| 2qkw_B | 321 | Structural Basis For Activation Of Plant Immunity B | 7e-05 | ||
| 2of2_A | 271 | Crystal Structure Of Furanopyrimidine 8 Bound To Lc | 8e-05 | ||
| 2og8_A | 265 | Crystal Structure Of Aminoquinazoline 36 Bound To L | 8e-05 | ||
| 2ofv_A | 277 | Crystal Structure Of Aminoquinazoline 1 Bound To Lc | 8e-05 | ||
| 3lck_A | 271 | The Kinase Domain Of Human Lymphocyte Kinase (Lck), | 8e-05 | ||
| 3bys_A | 277 | Co-Crystal Structure Of Lck And Aminopyrimidine Ami | 8e-05 | ||
| 3bym_A | 272 | X-Ray Co-Crystal Structure Aminobenzimidazole Triaz | 8e-05 | ||
| 1y57_A | 452 | Structure Of Unphosphorylated C-Src In Complex With | 8e-05 | ||
| 2ofu_A | 273 | X-Ray Crystal Structure Of 2-Aminopyrimidine Carbam | 8e-05 | ||
| 3txo_A | 353 | Pkc Eta Kinase In Complex With A Naphthyridine Leng | 8e-05 | ||
| 3fxz_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Ruthen | 9e-05 | ||
| 1fmk_A | 452 | Crystal Structure Of Human Tyrosine-Protein Kinase | 9e-05 | ||
| 1ksw_A | 452 | Structure Of Human C-Src Tyrosine Kinase (Thr338gly | 9e-05 | ||
| 2pl0_A | 289 | Lck Bound To Imatinib Length = 289 | 9e-05 | ||
| 1qpe_A | 279 | Structural Analysis Of The Lymphocyte-Specific Kina | 9e-05 | ||
| 2zm1_A | 285 | Crystal Structure Of Imidazo Pyrazin 1 Bound To The | 9e-05 | ||
| 2rfd_A | 324 | Crystal Structure Of The Complex Between The Egfr K | 9e-05 | ||
| 4gt5_A | 306 | Crystal Structure Of The Inactive Trka Kinase Domai | 1e-04 | ||
| 2h8h_A | 535 | Src Kinase In Complex With A Quinazoline Inhibitor | 1e-04 | ||
| 3q52_A | 306 | Structure Of Phosphorylated Pak1 Kinase Domain Leng | 1e-04 | ||
| 3kxz_A | 287 | The Complex Crystal Structure Of Lck With A Probe M | 1e-04 | ||
| 1qpd_A | 279 | Structural Analysis Of The Lymphocyte-specific Kina | 1e-04 | ||
| 1yhs_A | 273 | Crystal Structure Of Pim-1 Bound To Staurosporine L | 1e-04 | ||
| 4alu_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 1e-04 | ||
| 3pp0_A | 338 | Crystal Structure Of The Kinase Domain Of Human Her | 1e-04 | ||
| 3kmm_A | 288 | Structure Of Human Lck Kinase With A Small Molecule | 1e-04 | ||
| 3r00_A | 299 | The Discovery Of Novel Benzofuran-2-Carboxylic Acid | 1e-04 | ||
| 2zv7_A | 279 | Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | 1e-04 | ||
| 1yhv_A | 297 | Crystal Structure Of Pak1 Kinase Domain With Two Po | 1e-04 | ||
| 3cxw_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-04 | ||
| 1xws_A | 313 | Crystal Structure Of The Human Pim1 Kinase Domain L | 1e-04 | ||
| 2bil_B | 313 | The Human Protein Kinase Pim1 In Complex With Its C | 1e-04 | ||
| 3cy3_A | 314 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-04 | ||
| 3jpv_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-04 | ||
| 3uix_A | 298 | Crystal Structure Of Pim1 Kinase In Complex With Sm | 1e-04 | ||
| 3ma3_A | 313 | Crystal Structure Of Human Proto-Oncogene Serine Th | 1e-04 | ||
| 3geq_A | 286 | Structural Basis For The Chemical Rescue Of Src Kin | 1e-04 | ||
| 2j2i_B | 312 | Crystal Structure Of The Humab Pim1 In Complex With | 1e-04 | ||
| 4alv_A | 328 | Benzofuropyrimidinone Inhibitors Of Pim-1 Length = | 1e-04 | ||
| 1xqz_A | 300 | Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut | 1e-04 | ||
| 3jxw_A | 294 | Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4- | 1e-04 | ||
| 3f2a_A | 300 | Crystal Structure Of Human Pim-1 In Complex With Da | 1e-04 | ||
| 1ywv_A | 293 | Crystal Structures Of Proto-Oncogene Kinase Pim1: A | 1e-04 | ||
| 3dcv_A | 328 | Crystal Structure Of Human Pim1 Kinase Complexed Wi | 1e-04 | ||
| 1yxs_A | 293 | Crystal Structure Of Kinase Pim1 With P123m Mutatio | 1e-04 | ||
| 2bik_B | 313 | Human Pim1 Phosphorylated On Ser261 Length = 313 | 1e-04 | ||
| 2xj0_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-4 Fro | 1e-04 | ||
| 2xix_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-1 Fro | 1e-04 | ||
| 4f0i_A | 300 | Crystal Structure Of Apo Trka Length = 300 | 1e-04 | ||
| 2xiy_A | 301 | Protein Kinase Pim-1 In Complex With Fragment-2 Fro | 1e-04 | ||
| 3qgw_A | 286 | Crystal Structure Of Itk Kinase Bound To An Inhibit | 1e-04 | ||
| 3a99_A | 320 | Structure Of Pim-1 Kinase Crystallized In The Prese | 1e-04 | ||
| 1ywn_A | 316 | Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]p | 1e-04 | ||
| 2obj_A | 333 | Crystal Structure Of Human Pim-1 Kinase In Complex | 1e-04 | ||
| 4dtk_A | 276 | Novel And Selective Pan-Pim Kinase Inhibitor Length | 1e-04 | ||
| 2zv2_A | 298 | Crystal Structure Of Human CalciumCALMODULIN-Depend | 1e-04 | ||
| 4agc_A | 353 | Crystal Structure Of Vegfr2 (Juxtamembrane And Kina | 1e-04 | ||
| 1yol_A | 283 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-04 | ||
| 4a7c_A | 308 | Crystal Structure Of Pim1 Kinase With Etp46546 Leng | 1e-04 | ||
| 1ad5_A | 438 | Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | 1e-04 | ||
| 2bdf_A | 279 | Src Kinase In Complex With Inhibitor Ap23451 Length | 1e-04 | ||
| 3c4e_A | 273 | Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7 | 1e-04 | ||
| 3bhy_A | 283 | Crystal Structure Of Human Death Associated Protein | 1e-04 | ||
| 2ya9_A | 361 | Crystal Structure Of The Autoinhibited Form Of Mous | 1e-04 | ||
| 1zws_A | 288 | Crystal Structure Of The Catalytic Domain Of Human | 1e-04 | ||
| 1yi6_A | 276 | C-Term Tail Segment Of Human Tyrosine Kinase (258-5 | 1e-04 | ||
| 1vr2_A | 316 | Human Vascular Endothelial Growth Factor Receptor 2 | 1e-04 | ||
| 4as0_A | 273 | Cyclometalated Phthalimides As Protein Kinase Inhib | 1e-04 | ||
| 3u4w_A | 275 | Src In Complex With Dna-Templated Macrocyclic Inhib | 1e-04 | ||
| 2qq7_A | 286 | Crystal Structure Of Drug Resistant Src Kinase Doma | 1e-04 | ||
| 1byg_A | 278 | Kinase Domain Of Human C-Terminal Src Kinase (Csk) | 1e-04 | ||
| 2a27_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 1e-04 | ||
| 3t9t_A | 267 | Crystal Structure Of Btk Mutant (F435t,K596r) Compl | 1e-04 | ||
| 1z9x_A | 321 | Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal | 1e-04 | ||
| 3fpq_A | 290 | Crystal Structure Of The Kinase Domain Of Wnk1 Leng | 1e-04 | ||
| 3svv_A | 286 | Crystal Structure Of T338c C-Src Covalently Bound T | 1e-04 | ||
| 2oiq_A | 286 | Crystal Structure Of Chicken C-Src Kinase Domain In | 1e-04 | ||
| 2hwo_A | 286 | Crystal Structure Of Src Kinase Domain In Complex W | 1e-04 | ||
| 1yoj_A | 283 | Crystal Structure Of Src Kinase Domain Length = 283 | 1e-04 | ||
| 3vw6_A | 269 | Crystal Structure Of Human Apoptosis Signal-Regulat | 1e-04 | ||
| 2xir_A | 316 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 1e-04 | ||
| 4aoj_A | 329 | Human Trka In Complex With The Inhibitor Az-23 Leng | 2e-04 | ||
| 3d7u_B | 277 | Structural Basis For The Recognition Of C-Src By It | 2e-04 | ||
| 3d7u_A | 263 | Structural Basis For The Recognition Of C-Src By It | 2e-04 | ||
| 3oez_A | 286 | Crystal Structure Of The L317i Mutant Of The Chicke | 2e-04 | ||
| 3g6h_A | 286 | Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma | 2e-04 | ||
| 3dqw_A | 286 | C-Src Kinase Domain Thr338ile Mutant In Complex Wit | 2e-04 | ||
| 1yrp_A | 278 | Catalytic Domain Of Human Zip Kinase Phosphorylated | 2e-04 | ||
| 3miy_A | 266 | X-Ray Crystal Structure Of Itk Complexed With Sunit | 2e-04 | ||
| 2a2a_A | 321 | High-resolution Crystallographic Analysis Of The Au | 2e-04 | ||
| 1wmk_A | 321 | Human Death-Associated Kinase Drp-1, Mutant S308d D | 2e-04 | ||
| 3rzf_A | 677 | Crystal Structure Of Inhibitor Of Kappab Kinase Bet | 2e-04 | ||
| 3qa8_A | 676 | Crystal Structure Of Inhibitor Of Kappa B Kinase Be | 2e-04 | ||
| 2p2i_A | 314 | Crystal Structure Of The Vegfr2 Kinase Domain In Co | 2e-04 | ||
| 3ug1_A | 334 | Crystal Structure Of The Mutated Egfr Kinase Domain | 2e-04 | ||
| 3v5j_A | 266 | Crystal Structure Of Interleukin-2 Inducible T-Cell | 2e-04 | ||
| 4hct_A | 269 | Crystal Structure Of Itk In Complex With Compound 5 | 2e-04 | ||
| 2xyu_A | 285 | Crystal Structure Of Epha4 Kinase Domain In Complex | 2e-04 | ||
| 4hzs_A | 341 | Crystal Structure Of Ack1 Kinase Domain With C-term | 2e-04 | ||
| 4id7_A | 273 | Ack1 Kinase In Complex With The Inhibitor Cis-3-[8- | 2e-04 | ||
| 4i21_A | 329 | Crystal Structure Of L858r + T790m Egfr Kinase Doma | 2e-04 | ||
| 1u46_A | 291 | Crystal Structure Of The Unphosphorylated Kinase Do | 2e-04 | ||
| 1sm2_A | 264 | Crystal Structure Of The Phosphorylated Interleukin | 2e-04 | ||
| 3kul_A | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 2e-04 | ||
| 4i1z_A | 329 | Crystal Structure Of The Monomeric (v948r) Form Of | 2e-04 | ||
| 4ewh_B | 275 | Co-Crystal Structure Of Ack1 With Inhibitor Length | 2e-04 | ||
| 2y6m_A | 291 | Crystal Structure Of Epha4 Kinase Domain Length = 2 | 2e-04 | ||
| 3w2o_A | 331 | Egfr Kinase Domain T790m/l858r Mutant With Tak-285 | 2e-04 | ||
| 1u54_A | 291 | Crystal Structures Of The Phosphorylated And Unphos | 2e-04 | ||
| 3eqp_B | 276 | Crystal Structure Of Ack1 With Compound T95 Length | 2e-04 | ||
| 4hzr_A | 277 | Crystal Structure Of Ack1 Kinase Domain Length = 27 | 2e-04 | ||
| 2r2p_A | 295 | Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep | 2e-04 | ||
| 2jkk_A | 276 | Focal Adhesion Kinase Catalytic Domain In Complex W | 2e-04 | ||
| 3vnt_A | 318 | Crystal Structure Of The Kinase Domain Of Human Veg | 2e-04 | ||
| 2dq7_X | 283 | Crystal Structure Of Fyn Kinase Domain Complexed Wi | 3e-04 | ||
| 3mpm_A | 267 | Lck Complexed With A Pyrazolopyrimidine Length = 26 | 3e-04 | ||
| 3q4z_A | 306 | Structure Of Unphosphorylated Pak1 Kinase Domain Le | 3e-04 | ||
| 1k9a_A | 450 | Crystal Structure Analysis Of Full-Length Carboxyl- | 3e-04 | ||
| 2hel_A | 306 | Crystal Structure Of A Mutant Epha4 Kinase Domain ( | 3e-04 | ||
| 2ptk_A | 453 | Chicken Src Tyrosine Kinase Length = 453 | 3e-04 | ||
| 4euu_A | 319 | Structure Of Bx-795 Complexed With Human Tbk1 Kinas | 3e-04 | ||
| 2j0k_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 3e-04 | ||
| 2itn_A | 327 | Crystal Structure Of Egfr Kinase Domain G719s Mutat | 3e-04 | ||
| 2eb3_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (L8 | 3e-04 | ||
| 2eb2_A | 334 | Crystal Structure Of Mutated Egfr Kinase Domain (G7 | 3e-04 | ||
| 3bel_A | 315 | X-Ray Structure Of Egfr In Complex With Oxime Inhib | 3e-04 | ||
| 2itt_A | 327 | Crystal Structure Of Egfr Kinase Domain L858r Mutat | 3e-04 | ||
| 1nxk_A | 400 | Crystal Structure Of Staurosporine Bound To Map Kap | 3e-04 | ||
| 4i20_A | 329 | Crystal Structure Of Monomeric (v948r) Primary Onco | 4e-04 | ||
| 2j0l_A | 276 | Crystal Structure Of A The Active Conformation Of T | 4e-04 | ||
| 4eut_A | 396 | Structure Of Bx-795 Complexed With Unphosphorylated | 4e-04 | ||
| 2rei_A | 318 | Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep | 4e-04 | ||
| 3d7t_A | 269 | Structural Basis For The Recognition Of C-Src By It | 4e-04 | ||
| 3hgk_A | 327 | Crystal Structure Of Effect Protein Avrptob Complex | 5e-04 | ||
| 3c7q_A | 316 | Structure Of Vegfr2 Kinase Domain In Complex With B | 5e-04 | ||
| 3b2t_A | 311 | Structure Of Phosphotransferase Length = 311 | 5e-04 | ||
| 2ebm_A | 128 | Solution Structure Of The Rwd Domain Of Human Rwd D | 5e-04 | ||
| 2ogv_A | 317 | Crystal Structure Of The Autoinhibited Human C-Fms | 5e-04 | ||
| 3lcd_A | 329 | Inhibitor Bound To A Dfg-In Structure Of The Kinase | 6e-04 | ||
| 4dgl_C | 335 | Crystal Structure Of The Ck2 Tetrameric Holoenzyme | 6e-04 | ||
| 2ivv_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 6e-04 | ||
| 2j0j_A | 656 | Crystal Structure Of A Fragment Of Focal Adhesion K | 6e-04 | ||
| 2y4i_B | 319 | Ksr2-Mek1 Heterodimer Length = 319 | 6e-04 | ||
| 2i0e_A | 353 | Structure Of Catalytic Domain Of Human Protein Kina | 6e-04 | ||
| 3kul_B | 325 | Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep | 7e-04 | ||
| 4h1j_A | 293 | Crystal Structure Of Pyk2 With The Pyrazole 13a Len | 8e-04 | ||
| 2ivt_A | 314 | Crystal Structure Of Phosphorylated Ret Tyrosine Ki | 8e-04 | ||
| 2ivs_A | 314 | Crystal Structure Of Non-Phosphorylated Ret Tyrosin | 9e-04 | ||
| 1ukx_A | 137 | Solution Structure Of The Rwd Domain Of Mouse Gcn2 | 9e-04 | ||
| 1y6a_A | 366 | Crystal Structure Of Vegfr2 In Complex With A 2-Ani | 9e-04 | ||
| 3cc6_A | 281 | Crystal Structure Of Kinase Domain Of Protein Tyros | 9e-04 |
| >pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303 | Back alignment and structure |
|
| >pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303 | Back alignment and structure |
|
| >pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332 | Back alignment and structure |
|
| >pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299 | Back alignment and structure |
|
| >pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284 | Back alignment and structure |
|
| >pdb|4G84|A Chain A, Crystal Structure Of Human Hisrs Length = 464 | Back alignment and structure |
|
| >pdb|4G85|A Chain A, Crystal Structure Of Human Hisrs Length = 517 | Back alignment and structure |
|
| >pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350 | Back alignment and structure |
|
| >pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311 | Back alignment and structure |
|
| >pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484 | Back alignment and structure |
|
| >pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298 | Back alignment and structure |
|
| >pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507 | Back alignment and structure |
|
| >pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508 | Back alignment and structure |
|
| >pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484 | Back alignment and structure |
|
| >pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494 | Back alignment and structure |
|
| >pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306 | Back alignment and structure |
|
| >pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306 | Back alignment and structure |
|
| >pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279 | Back alignment and structure |
|
| >pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279 | Back alignment and structure |
|
| >pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292 | Back alignment and structure |
|
| >pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287 | Back alignment and structure |
|
| >pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467 | Back alignment and structure |
|
| >pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292 | Back alignment and structure |
|
| >pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300 | Back alignment and structure |
|
| >pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279 | Back alignment and structure |
|
| >pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299 | Back alignment and structure |
|
| >pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298 | Back alignment and structure |
|
| >pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289 | Back alignment and structure |
|
| >pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299 | Back alignment and structure |
|
| >pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297 | Back alignment and structure |
|
| >pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298 | Back alignment and structure |
|
| >pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458 | Back alignment and structure |
|
| >pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301 | Back alignment and structure |
|
| >pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298 | Back alignment and structure |
|
| >pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299 | Back alignment and structure |
|
| >pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300 | Back alignment and structure |
|
| >pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303 | Back alignment and structure |
|
| >pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300 | Back alignment and structure |
|
| >pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309 | Back alignment and structure |
|
| >pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299 | Back alignment and structure |
|
| >pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298 | Back alignment and structure |
|
| >pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296 | Back alignment and structure |
|
| >pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299 | Back alignment and structure |
|
| >pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302 | Back alignment and structure |
|
| >pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300 | Back alignment and structure |
|
| >pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299 | Back alignment and structure |
|
| >pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299 | Back alignment and structure |
|
| >pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486 | Back alignment and structure |
|
| >pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323 | Back alignment and structure |
|
| >pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297 | Back alignment and structure |
|
| >pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289 | Back alignment and structure |
|
| >pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295 | Back alignment and structure |
|
| >pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273 | Back alignment and structure |
|
| >pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322 | Back alignment and structure |
|
| >pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276 | Back alignment and structure |
|
| >pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287 | Back alignment and structure |
|
| >pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286 | Back alignment and structure |
|
| >pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294 | Back alignment and structure |
|
| >pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278 | Back alignment and structure |
|
| >pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276 | Back alignment and structure |
|
| >pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269 | Back alignment and structure |
|
| >pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271 | Back alignment and structure |
|
| >pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268 | Back alignment and structure |
|
| >pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269 | Back alignment and structure |
|
| >pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273 | Back alignment and structure |
|
| >pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383 | Back alignment and structure |
|
| >pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279 | Back alignment and structure |
|
| >pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476 | Back alignment and structure |
|
| >pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311 | Back alignment and structure |
|
| >pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311 | Back alignment and structure |
|
| >pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311 | Back alignment and structure |
|
| >pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432 | Back alignment and structure |
|
| >pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370 | Back alignment and structure |
|
| >pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275 | Back alignment and structure |
|
| >pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327 | Back alignment and structure |
|
| >pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327 | Back alignment and structure |
|
| >pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327 | Back alignment and structure |
|
| >pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353 | Back alignment and structure |
|
| >pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327 | Back alignment and structure |
|
| >pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320 | Back alignment and structure |
|
| >pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353 | Back alignment and structure |
|
| >pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328 | Back alignment and structure |
|
| >pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed With Inhibitor Pd0407824 Length = 289 | Back alignment and structure |
|
| >pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839 Length = 287 | Back alignment and structure |
|
| >pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396 Length = 287 | Back alignment and structure |
|
| >pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353 | Back alignment and structure |
|
| >pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770 Length = 285 | Back alignment and structure |
|
| >pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370 | Back alignment and structure |
|
| >pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331 | Back alignment and structure |
|
| >pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327 | Back alignment and structure |
|
| >pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464 | Back alignment and structure |
|
| >pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367 | Back alignment and structure |
|
| >pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348 | Back alignment and structure |
|
| >pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317 | Back alignment and structure |
|
| >pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442 | Back alignment and structure |
|
| >pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423 | Back alignment and structure |
|
| >pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276 | Back alignment and structure |
|
| >pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398 | Back alignment and structure |
|
| >pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360 | Back alignment and structure |
|
| >pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319 | Back alignment and structure |
|
| >pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364 | Back alignment and structure |
|
| >pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311 | Back alignment and structure |
|
| >pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348 | Back alignment and structure |
|
| >pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311 | Back alignment and structure |
|
| >pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371 | Back alignment and structure |
|
| >pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276 | Back alignment and structure |
|
| >pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364 | Back alignment and structure |
|
| >pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299 | Back alignment and structure |
|
| >pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429 | Back alignment and structure |
|
| >pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355 | Back alignment and structure |
|
| >pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328 | Back alignment and structure |
|
| >pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353 | Back alignment and structure |
|
| >pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360 | Back alignment and structure |
|
| >pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504 | Back alignment and structure |
|
| >pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366 | Back alignment and structure |
|
| >pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311 | Back alignment and structure |
|
| >pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356 | Back alignment and structure |
|
| >pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313 | Back alignment and structure |
|
| >pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380 | Back alignment and structure |
|
| >pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365 | Back alignment and structure |
|
| >pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360 | Back alignment and structure |
|
| >pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353 | Back alignment and structure |
|
| >pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274 | Back alignment and structure |
|
| >pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288 | Back alignment and structure |
|
| >pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379 | Back alignment and structure |
|
| >pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327 | Back alignment and structure |
|
| >pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379 | Back alignment and structure |
|
| >pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369 | Back alignment and structure |
|
| >pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306 | Back alignment and structure |
|
| >pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365 | Back alignment and structure |
|
| >pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348 | Back alignment and structure |
|
| >pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288 | Back alignment and structure |
|
| >pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370 | Back alignment and structure |
|
| >pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367 | Back alignment and structure |
|
| >pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348 | Back alignment and structure |
|
| >pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369 | Back alignment and structure |
|
| >pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371 | Back alignment and structure |
|
| >pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360 | Back alignment and structure |
|
| >pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310 | Back alignment and structure |
|
| >pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386 | Back alignment and structure |
|
| >pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364 | Back alignment and structure |
|
| >pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367 | Back alignment and structure |
|
| >pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383 | Back alignment and structure |
|
| >pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354 | Back alignment and structure |
|
| >pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271 | Back alignment and structure |
|
| >pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360 | Back alignment and structure |
|
| >pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367 | Back alignment and structure |
|
| >pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336 | Back alignment and structure |
|
| >pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366 | Back alignment and structure |
|
| >pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360 | Back alignment and structure |
|
| >pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370 | Back alignment and structure |
|
| >pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362 | Back alignment and structure |
|
| >pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365 | Back alignment and structure |
|
| >pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359 | Back alignment and structure |
|
| >pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379 | Back alignment and structure |
|
| >pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370 | Back alignment and structure |
|
| >pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372 | Back alignment and structure |
|
| >pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360 | Back alignment and structure |
|
| >pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362 | Back alignment and structure |
|
| >pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359 | Back alignment and structure |
|
| >pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362 | Back alignment and structure |
|
| >pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371 | Back alignment and structure |
|
| >pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370 | Back alignment and structure |
|
| >pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354 | Back alignment and structure |
|
| >pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360 | Back alignment and structure |
|
| >pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372 | Back alignment and structure |
|
| >pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349 | Back alignment and structure |
|
| >pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348 | Back alignment and structure |
|
| >pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350 | Back alignment and structure |
|
| >pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351 | Back alignment and structure |
|
| >pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284 | Back alignment and structure |
|
| >pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279 | Back alignment and structure |
|
| >pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363 | Back alignment and structure |
|
| >pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366 | Back alignment and structure |
|
| >pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365 | Back alignment and structure |
|
| >pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318 | Back alignment and structure |
|
| >pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362 | Back alignment and structure |
|
| >pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285 | Back alignment and structure |
|
| >pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358 | Back alignment and structure |
|
| >pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356 | Back alignment and structure |
|
| >pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306 | Back alignment and structure |
|
| >pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271 | Back alignment and structure |
|
| >pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355 | Back alignment and structure |
|
| >pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356 | Back alignment and structure |
|
| >pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285 | Back alignment and structure |
|
| >pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310 | Back alignment and structure |
|
| >pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281 | Back alignment and structure |
|
| >pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695 | Back alignment and structure |
|
| >pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268 | Back alignment and structure |
|
| >pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297 | Back alignment and structure |
|
| >pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286 | Back alignment and structure |
|
| >pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311 | Back alignment and structure |
|
| >pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283 | Back alignment and structure |
|
| >pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280 | Back alignment and structure |
|
| >pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364 | Back alignment and structure |
|
| >pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289 | Back alignment and structure |
|
| >pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors Length = 311 | Back alignment and structure |
|
| >pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689 | Back alignment and structure |
|
| >pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314 | Back alignment and structure |
|
| >pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective Inhibitors Of Jak2 Length = 313 | Back alignment and structure |
|
| >pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688 | Back alignment and structure |
|
| >pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286 | Back alignment and structure |
|
| >pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285 | Back alignment and structure |
|
| >pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286 | Back alignment and structure |
|
| >pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280 | Back alignment and structure |
|
| >pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311 | Back alignment and structure |
|
| >pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389 | Back alignment and structure |
|
| >pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324 | Back alignment and structure |
|
| >pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311 | Back alignment and structure |
|
| >pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282 | Back alignment and structure |
|
| >pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283 | Back alignment and structure |
|
| >pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287 | Back alignment and structure |
|
| >pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272 | Back alignment and structure |
|
| >pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312 | Back alignment and structure |
|
| >pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279 | Back alignment and structure |
|
| >pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268 | Back alignment and structure |
|
| >pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311 | Back alignment and structure |
|
| >pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267 | Back alignment and structure |
|
| >pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310 | Back alignment and structure |
|
| >pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311 | Back alignment and structure |
|
| >pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285 | Back alignment and structure |
|
| >pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312 | Back alignment and structure |
|
| >pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311 | Back alignment and structure |
|
| >pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311 | Back alignment and structure |
|
| >pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275 | Back alignment and structure |
|
| >pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272 | Back alignment and structure |
|
| >pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316 | Back alignment and structure |
|
| >pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285 | Back alignment and structure |
|
| >pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382 | Back alignment and structure |
|
| >pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360 | Back alignment and structure |
|
| >pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268 | Back alignment and structure |
|
| >pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311 | Back alignment and structure |
|
| >pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292 | Back alignment and structure |
|
| >pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268 | Back alignment and structure |
|
| >pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313 | Back alignment and structure |
|
| >pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311 | Back alignment and structure |
|
| >pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262 | Back alignment and structure |
|
| >pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282 | Back alignment and structure |
|
| >pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327 | Back alignment and structure |
|
| >pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360 | Back alignment and structure |
|
| >pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334 | Back alignment and structure |
|
| >pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301 | Back alignment and structure |
|
| >pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362 | Back alignment and structure |
|
| >pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335 | Back alignment and structure |
|
| >pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292 | Back alignment and structure |
|
| >pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272 | Back alignment and structure |
|
| >pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309 | Back alignment and structure |
|
| >pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272 | Back alignment and structure |
|
| >pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301 | Back alignment and structure |
|
| >pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278 | Back alignment and structure |
|
| >pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331 | Back alignment and structure |
|
| >pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293 | Back alignment and structure |
|
| >pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302 | Back alignment and structure |
|
| >pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290 | Back alignment and structure |
|
| >pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303 | Back alignment and structure |
|
| >pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331 | Back alignment and structure |
|
| >pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360 | Back alignment and structure |
|
| >pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373 | Back alignment and structure |
|
| >pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420 | Back alignment and structure |
|
| >pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422 | Back alignment and structure |
|
| >pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414 | Back alignment and structure |
|
| >pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351 | Back alignment and structure |
|
| >pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424 | Back alignment and structure |
|
| >pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465 | Back alignment and structure |
|
| >pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii Inhibtor Nvp-Bbt594 Length = 295 | Back alignment and structure |
|
| >pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8 Length = 298 | Back alignment and structure |
|
| >pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269 | Back alignment and structure |
|
| >pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391 | Back alignment and structure |
|
| >pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine Inhibitor Length = 301 | Back alignment and structure |
|
| >pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284 | Back alignment and structure |
|
| >pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors Length = 293 | Back alignment and structure |
|
| >pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent 2,8-Diaryl Quinoxaline Inhibitor Length = 295 | Back alignment and structure |
|
| >pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A 1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor Length = 303 | Back alignment and structure |
|
| >pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8 Length = 300 | Back alignment and structure |
|
| >pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A Potent And Specific Pan-Janus Kinase Inhibitor Length = 293 | Back alignment and structure |
|
| >pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2 Length = 301 | Back alignment and structure |
|
| >pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444 | Back alignment and structure |
|
| >pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372 | Back alignment and structure |
|
| >pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294 | Back alignment and structure |
|
| >pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351 | Back alignment and structure |
|
| >pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430 | Back alignment and structure |
|
| >pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360 | Back alignment and structure |
|
| >pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364 | Back alignment and structure |
|
| >pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350 | Back alignment and structure |
|
| >pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366 | Back alignment and structure |
|
| >pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357 | Back alignment and structure |
|
| >pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364 | Back alignment and structure |
|
| >pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358 | Back alignment and structure |
|
| >pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358 | Back alignment and structure |
|
| >pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351 | Back alignment and structure |
|
| >pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325 | Back alignment and structure |
|
| >pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285 | Back alignment and structure |
|
| >pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365 | Back alignment and structure |
|
| >pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382 | Back alignment and structure |
|
| >pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282 | Back alignment and structure |
|
| >pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364 | Back alignment and structure |
|
| >pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318 | Back alignment and structure |
|
| >pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378 | Back alignment and structure |
|
| >pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367 | Back alignment and structure |
|
| >pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371 | Back alignment and structure |
|
| >pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295 | Back alignment and structure |
|
| >pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308 | Back alignment and structure |
|
| >pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432 | Back alignment and structure |
|
| >pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351 | Back alignment and structure |
|
| >pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351 | Back alignment and structure |
|
| >pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351 | Back alignment and structure |
|
| >pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303 | Back alignment and structure |
|
| >pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388 | Back alignment and structure |
|
| >pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364 | Back alignment and structure |
|
| >pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306 | Back alignment and structure |
|
| >pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360 | Back alignment and structure |
|
| >pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371 | Back alignment and structure |
|
| >pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280 | Back alignment and structure |
|
| >pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343 | Back alignment and structure |
|
| >pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353 | Back alignment and structure |
|
| >pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292 | Back alignment and structure |
|
| >pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360 | Back alignment and structure |
|
| >pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360 | Back alignment and structure |
|
| >pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352 | Back alignment and structure |
|
| >pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289 | Back alignment and structure |
|
| >pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368 | Back alignment and structure |
|
| >pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368 | Back alignment and structure |
|
| >pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2 Length = 298 | Back alignment and structure |
|
| >pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With Compound 7 Length = 298 | Back alignment and structure |
|
| >pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321 | Back alignment and structure |
|
| >pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360 | Back alignment and structure |
|
| >pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350 | Back alignment and structure |
|
| >pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380 | Back alignment and structure |
|
| >pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350 | Back alignment and structure |
|
| >pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352 | Back alignment and structure |
|
| >pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349 | Back alignment and structure |
|
| >pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346 | Back alignment and structure |
|
| >pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448 | Back alignment and structure |
|
| >pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304 | Back alignment and structure |
|
| >pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351 | Back alignment and structure |
|
| >pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350 | Back alignment and structure |
|
| >pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349 | Back alignment and structure |
|
| >pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351 | Back alignment and structure |
|
| >pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350 | Back alignment and structure |
|
| >pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350 | Back alignment and structure |
|
| >pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350 | Back alignment and structure |
|
| >pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351 | Back alignment and structure |
|
| >pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350 | Back alignment and structure |
|
| >pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350 | Back alignment and structure |
|
| >pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348 | Back alignment and structure |
|
| >pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345 | Back alignment and structure |
|
| >pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336 | Back alignment and structure |
|
| >pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434 | Back alignment and structure |
|
| >pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310 | Back alignment and structure |
|
| >pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329 | Back alignment and structure |
|
| >pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317 | Back alignment and structure |
|
| >pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317 | Back alignment and structure |
|
| >pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317 | Back alignment and structure |
|
| >pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350 | Back alignment and structure |
|
| >pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350 | Back alignment and structure |
|
| >pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350 | Back alignment and structure |
|
| >pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302 | Back alignment and structure |
|
| >pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301 | Back alignment and structure |
|
| >pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380 | Back alignment and structure |
|
| >pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309 | Back alignment and structure |
|
| >pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351 | Back alignment and structure |
|
| >pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351 | Back alignment and structure |
|
| >pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302 | Back alignment and structure |
|
| >pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350 | Back alignment and structure |
|
| >pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350 | Back alignment and structure |
|
| >pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304 | Back alignment and structure |
|
| >pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336 | Back alignment and structure |
|
| >pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350 | Back alignment and structure |
|
| >pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350 | Back alignment and structure |
|
| >pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394 | Back alignment and structure |
|
| >pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373 | Back alignment and structure |
|
| >pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325 | Back alignment and structure |
|
| >pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350 | Back alignment and structure |
|
| >pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305 | Back alignment and structure |
|
| >pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304 | Back alignment and structure |
|
| >pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351 | Back alignment and structure |
|
| >pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304 | Back alignment and structure |
|
| >pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350 | Back alignment and structure |
|
| >pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350 | Back alignment and structure |
|
| >pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326 | Back alignment and structure |
|
| >pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351 | Back alignment and structure |
|
| >pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352 | Back alignment and structure |
|
| >pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362 | Back alignment and structure |
|
| >pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In Rodent Cancer Tumor Models Length = 297 | Back alignment and structure |
|
| >pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573 | Back alignment and structure |
|
| >pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308 | Back alignment and structure |
|
| >pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434 | Back alignment and structure |
|
| >pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314 | Back alignment and structure |
|
| >pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354 | Back alignment and structure |
|
| >pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491 | Back alignment and structure |
|
| >pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395 | Back alignment and structure |
|
| >pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337 | Back alignment and structure |
|
| >pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307 | Back alignment and structure |
|
| >pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321 | Back alignment and structure |
|
| >pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350 | Back alignment and structure |
|
| >pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30 Length = 302 | Back alignment and structure |
|
| >pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290 | Back alignment and structure |
|
| >pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341 | Back alignment and structure |
|
| >pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305 | Back alignment and structure |
|
| >pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes Length = 290 | Back alignment and structure |
|
| >pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333 | Back alignment and structure |
|
| >pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351 | Back alignment and structure |
|
| >pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307 | Back alignment and structure |
|
| >pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306 | Back alignment and structure |
|
| >pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300 | Back alignment and structure |
|
| >pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307 | Back alignment and structure |
|
| >pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307 | Back alignment and structure |
|
| >pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350 | Back alignment and structure |
|
| >pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328 | Back alignment and structure |
|
| >pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322 | Back alignment and structure |
|
| >pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371 | Back alignment and structure |
|
| >pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360 | Back alignment and structure |
|
| >pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350 | Back alignment and structure |
|
| >pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282 | Back alignment and structure |
|
| >pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350 | Back alignment and structure |
|
| >pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281 | Back alignment and structure |
|
| >pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337 | Back alignment and structure |
|
| >pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350 | Back alignment and structure |
|
| >pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350 | Back alignment and structure |
|
| >pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284 | Back alignment and structure |
|
| >pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275 | Back alignment and structure |
|
| >pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276 | Back alignment and structure |
|
| >pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301 | Back alignment and structure |
|
| >pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350 | Back alignment and structure |
|
| >pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294 | Back alignment and structure |
|
| >pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337 | Back alignment and structure |
|
| >pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371 | Back alignment and structure |
|
| >pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350 | Back alignment and structure |
|
| >pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345 | Back alignment and structure |
|
| >pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335 | Back alignment and structure |
|
| >pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336 | Back alignment and structure |
|
| >pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339 | Back alignment and structure |
|
| >pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335 | Back alignment and structure |
|
| >pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315 | Back alignment and structure |
|
| >pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350 | Back alignment and structure |
|
| >pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342 | Back alignment and structure |
|
| >pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350 | Back alignment and structure |
|
| >pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350 | Back alignment and structure |
|
| >pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345 | Back alignment and structure |
|
| >pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304 | Back alignment and structure |
|
| >pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423 | Back alignment and structure |
|
| >pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303 | Back alignment and structure |
|
| >pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301 | Back alignment and structure |
|
| >pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373 | Back alignment and structure |
|
| >pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311 | Back alignment and structure |
|
| >pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315 | Back alignment and structure |
|
| >pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326 | Back alignment and structure |
|
| >pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311 | Back alignment and structure |
|
| >pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292 | Back alignment and structure |
|
| >pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316 | Back alignment and structure |
|
| >pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365 | Back alignment and structure |
|
| >pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296 | Back alignment and structure |
|
| >pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335 | Back alignment and structure |
|
| >pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294 | Back alignment and structure |
|
| >pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346 | Back alignment and structure |
|
| >pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334 | Back alignment and structure |
|
| >pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446 | Back alignment and structure |
|
| >pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290 | Back alignment and structure |
|
| >pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446 | Back alignment and structure |
|
| >pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334 | Back alignment and structure |
|
| >pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402 | Back alignment and structure |
|
| >pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317 | Back alignment and structure |
|
| >pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336 | Back alignment and structure |
|
| >pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317 | Back alignment and structure |
|
| >pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295 | Back alignment and structure |
|
| >pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In Complex With Staurosporine Length = 309 | Back alignment and structure |
|
| >pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543 | Back alignment and structure |
|
| >pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543 | Back alignment and structure |
|
| >pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317 | Back alignment and structure |
|
| >pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346 | Back alignment and structure |
|
| >pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex With A Staurosporine Analogue Length = 290 | Back alignment and structure |
|
| >pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543 | Back alignment and structure |
|
| >pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285 | Back alignment and structure |
|
| >pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340 | Back alignment and structure |
|
| >pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312 | Back alignment and structure |
|
| >pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543 | Back alignment and structure |
|
| >pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277 | Back alignment and structure |
|
| >pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278 | Back alignment and structure |
|
| >pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327 | Back alignment and structure |
|
| >pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302 | Back alignment and structure |
|
| >pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330 | Back alignment and structure |
|
| >pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326 | Back alignment and structure |
|
| >pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294 | Back alignment and structure |
|
| >pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295 | Back alignment and structure |
|
| >pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With 2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic Acid ((s)-1,2,2-trimethyl-propyl)-amide Length = 314 | Back alignment and structure |
|
| >pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293 | Back alignment and structure |
|
| >pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410 | Back alignment and structure |
|
| >pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295 | Back alignment and structure |
|
| >pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 327 | Back alignment and structure |
|
| >pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site Inhibitor Showing High Selectivity Within The Janus Kinase Family Length = 315 | Back alignment and structure |
|
| >pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415 | Back alignment and structure |
|
| >pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406 | Back alignment and structure |
|
| >pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361 | Back alignment and structure |
|
| >pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318 | Back alignment and structure |
|
| >pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362 | Back alignment and structure |
|
| >pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342 | Back alignment and structure |
|
| >pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361 | Back alignment and structure |
|
| >pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362 | Back alignment and structure |
|
| >pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361 | Back alignment and structure |
|
| >pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355 | Back alignment and structure |
|
| >pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351 | Back alignment and structure |
|
| >pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362 | Back alignment and structure |
|
| >pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327 | Back alignment and structure |
|
| >pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277 | Back alignment and structure |
|
| >pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325 | Back alignment and structure |
|
| >pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294 | Back alignment and structure |
|
| >pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327 | Back alignment and structure |
|
| >pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307 | Back alignment and structure |
|
| >pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321 | Back alignment and structure |
|
| >pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325 | Back alignment and structure |
|
| >pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415 | Back alignment and structure |
|
| >pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316 | Back alignment and structure |
|
| >pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433 | Back alignment and structure |
|
| >pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298 | Back alignment and structure |
|
| >pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277 | Back alignment and structure |
|
| >pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387 | Back alignment and structure |
|
| >pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384 | Back alignment and structure |
|
| >pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342 | Back alignment and structure |
|
| >pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315 | Back alignment and structure |
|
| >pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312 | Back alignment and structure |
|
| >pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307 | Back alignment and structure |
|
| >pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307 | Back alignment and structure |
|
| >pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340 | Back alignment and structure |
|
| >pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360 | Back alignment and structure |
|
| >pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576 | Back alignment and structure |
|
| >pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299 | Back alignment and structure |
|
| >pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362 | Back alignment and structure |
|
| >pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328 | Back alignment and structure |
|
| >pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576 | Back alignment and structure |
|
| >pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301 | Back alignment and structure |
|
| >pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298 | Back alignment and structure |
|
| >pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362 | Back alignment and structure |
|
| >pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322 | Back alignment and structure |
|
| >pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342 | Back alignment and structure |
|
| >pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412 | Back alignment and structure |
|
| >pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341 | Back alignment and structure |
|
| >pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320 | Back alignment and structure |
|
| >pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323 | Back alignment and structure |
|
| >pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323 | Back alignment and structure |
|
| >pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322 | Back alignment and structure |
|
| >pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329 | Back alignment and structure |
|
| >pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293 | Back alignment and structure |
|
| >pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406 | Back alignment and structure |
|
| >pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400 | Back alignment and structure |
|
| >pdb|3A4O|X Chain X, Lyn Kinase Domain Length = 286 | Back alignment and structure |
|
| >pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304 | Back alignment and structure |
|
| >pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443 | Back alignment and structure |
|
| >pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344 | Back alignment and structure |
|
| >pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344 | Back alignment and structure |
|
| >pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298 | Back alignment and structure |
|
| >pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328 | Back alignment and structure |
|
| >pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320 | Back alignment and structure |
|
| >pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356 | Back alignment and structure |
|
| >pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361 | Back alignment and structure |
|
| >pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268 | Back alignment and structure |
|
| >pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331 | Back alignment and structure |
|
| >pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315 | Back alignment and structure |
|
| >pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332 | Back alignment and structure |
|
| >pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318 | Back alignment and structure |
|
| >pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419 | Back alignment and structure |
|
| >pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319 | Back alignment and structure |
|
| >pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373 | Back alignment and structure |
|
| >pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334 | Back alignment and structure |
|
| >pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373 | Back alignment and structure |
|
| >pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327 | Back alignment and structure |
|
| >pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371 | Back alignment and structure |
|
| >pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325 | Back alignment and structure |
|
| >pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family- Selective Tyrosine Kinase Inhibitor Length = 454 | Back alignment and structure |
|
| >pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324 | Back alignment and structure |
|
| >pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326 | Back alignment and structure |
|
| >pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291 | Back alignment and structure |
|
| >pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328 | Back alignment and structure |
|
| >pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327 | Back alignment and structure |
|
| >pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361 | Back alignment and structure |
|
| >pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286 | Back alignment and structure |
|
| >pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329 | Back alignment and structure |
|
| >pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327 | Back alignment and structure |
|
| >pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg- 1009247 Length = 270 | Back alignment and structure |
|
| >pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373 | Back alignment and structure |
|
| >pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437 | Back alignment and structure |
|
| >pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302 | Back alignment and structure |
|
| >pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327 | Back alignment and structure |
|
| >pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyrazolone Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A Resolution Length = 336 | Back alignment and structure |
|
| >pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridinyl-Triazine Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327 | Back alignment and structure |
|
| >pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330 | Back alignment and structure |
|
| >pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330 | Back alignment and structure |
|
| >pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329 | Back alignment and structure |
|
| >pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Pyridyl-Pyrimidine Benzimidazole Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330 | Back alignment and structure |
|
| >pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352 | Back alignment and structure |
|
| >pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333 | Back alignment and structure |
|
| >pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337 | Back alignment and structure |
|
| >pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405 | Back alignment and structure |
|
| >pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297 | Back alignment and structure |
|
| >pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295 | Back alignment and structure |
|
| >pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321 | Back alignment and structure |
|
| >pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck Length = 271 | Back alignment and structure |
|
| >pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck Length = 265 | Back alignment and structure |
|
| >pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck Length = 277 | Back alignment and structure |
|
| >pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck), Activated Form (Auto-Phosphorylated On Tyr394) Length = 271 | Back alignment and structure |
|
| >pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b Length = 277 | Back alignment and structure |
|
| >pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1 Bound To Lck Length = 272 | Back alignment and structure |
|
| >pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An Inhibitor Length = 452 | Back alignment and structure |
|
| >pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43 Bound To Lck Length = 273 | Back alignment and structure |
|
| >pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353 | Back alignment and structure |
|
| >pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297 | Back alignment and structure |
|
| >pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src Length = 452 | Back alignment and structure |
|
| >pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly Mutant) In Complex With N6-Benzyl Adp Length = 452 | Back alignment and structure |
|
| >pdb|2PL0|A Chain A, Lck Bound To Imatinib Length = 289 | Back alignment and structure |
|
| >pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck In Complex With Non-Selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase Domain Of Human Lck, (Auto-Phosphorylated On Tyr394) Length = 285 | Back alignment and structure |
|
| >pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324 | Back alignment and structure |
|
| >pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor Length = 535 | Back alignment and structure |
|
| >pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule W259 Length = 287 | Back alignment and structure |
|
| >pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck In Complex With Non-selective And Src Family Selective Kinase Inhibitors Length = 279 | Back alignment and structure |
|
| >pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273 | Back alignment and structure |
|
| >pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338 | Back alignment and structure |
|
| >pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule Inhibitor Length = 288 | Back alignment and structure |
|
| >pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299 | Back alignment and structure |
|
| >pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form Length = 279 | Back alignment and structure |
|
| >pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297 | Back alignment and structure |
|
| >pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314 | Back alignment and structure |
|
| >pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313 | Back alignment and structure |
|
| >pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313 | Back alignment and structure |
|
| >pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314 | Back alignment and structure |
|
| >pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298 | Back alignment and structure |
|
| >pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313 | Back alignment and structure |
|
| >pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286 | Back alignment and structure |
|
| >pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312 | Back alignment and structure |
|
| >pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328 | Back alignment and structure |
|
| >pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300 | Back alignment and structure |
|
| >pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294 | Back alignment and structure |
|
| >pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300 | Back alignment and structure |
|
| >pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293 | Back alignment and structure |
|
| >pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328 | Back alignment and structure |
|
| >pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293 | Back alignment and structure |
|
| >pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313 | Back alignment and structure |
|
| >pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300 | Back alignment and structure |
|
| >pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301 | Back alignment and structure |
|
| >pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320 | Back alignment and structure |
|
| >pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel 4-amino-furo[2,3-d]pyrimidine Length = 316 | Back alignment and structure |
|
| >pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333 | Back alignment and structure |
|
| >pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298 | Back alignment and structure |
|
| >pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase Domains) In Complex With Axitinib (Ag-013736) (N-Methyl-2-( 3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)- Benzamide) Length = 353 | Back alignment and structure |
|
| >pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Cgp77675 Length = 283 | Back alignment and structure |
|
| >pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308 | Back alignment and structure |
|
| >pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex Length = 438 | Back alignment and structure |
|
| >pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451 Length = 279 | Back alignment and structure |
|
| >pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273 | Back alignment and structure |
|
| >pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283 | Back alignment and structure |
|
| >pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361 | Back alignment and structure |
|
| >pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288 | Back alignment and structure |
|
| >pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533) Length = 276 | Back alignment and structure |
|
| >pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr) Kinase Domain Length = 316 | Back alignment and structure |
|
| >pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273 | Back alignment and structure |
|
| >pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275 | Back alignment and structure |
|
| >pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278 | Back alignment and structure |
|
| >pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267 | Back alignment and structure |
|
| >pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321 | Back alignment and structure |
|
| >pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1 Length = 290 | Back alignment and structure |
|
| >pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286 | Back alignment and structure |
|
| >pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286 | Back alignment and structure |
|
| >pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286 | Back alignment and structure |
|
| >pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain Length = 283 | Back alignment and structure |
|
| >pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269 | Back alignment and structure |
|
| >pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy) Quinolin-4-Yloxy)benzofuran-3-Carboxamide) Length = 316 | Back alignment and structure |
|
| >pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329 | Back alignment and structure |
|
| >pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277 | Back alignment and structure |
|
| >pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263 | Back alignment and structure |
|
| >pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286 | Back alignment and structure |
|
| >pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286 | Back alignment and structure |
|
| >pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286 | Back alignment and structure |
|
| >pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278 | Back alignment and structure |
|
| >pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266 | Back alignment and structure |
|
| >pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321 | Back alignment and structure |
|
| >pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321 | Back alignment and structure |
|
| >pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677 | Back alignment and structure |
|
| >pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676 | Back alignment and structure |
|
| >pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex With A Nicotinamide Inhibitor Length = 314 | Back alignment and structure |
|
| >pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334 | Back alignment and structure |
|
| >pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266 | Back alignment and structure |
|
| >pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269 | Back alignment and structure |
|
| >pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285 | Back alignment and structure |
|
| >pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal Sh3 Domain Length = 341 | Back alignment and structure |
|
| >pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor Cis-3-[8-amino-1-(4- Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol Length = 273 | Back alignment and structure |
|
| >pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In Complex With Mig6 Peptide Length = 329 | Back alignment and structure |
|
| >pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of The Tyrosine Kinase Ack1 Length = 291 | Back alignment and structure |
|
| >pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264 | Back alignment and structure |
|
| >pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The Gefitinib/erlotinib Resistant Egfr Kinase Domain L858r+t790m Length = 329 | Back alignment and structure |
|
| >pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor Length = 275 | Back alignment and structure |
|
| >pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291 | Back alignment and structure |
|
| >pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285 Length = 331 | Back alignment and structure |
|
| >pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And Unphosphorylated Kinase Domains Of The Cdc42-Associated Tyrosine Kinase Ack1 Bound To Amp-Pcp Length = 291 | Back alignment and structure |
|
| >pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95 Length = 276 | Back alignment and structure |
|
| >pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain Length = 277 | Back alignment and structure |
|
| >pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295 | Back alignment and structure |
|
| >pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With Bis- Anilino Pyrimidine Inhibitor Length = 276 | Back alignment and structure |
|
| >pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2 With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 318 | Back alignment and structure |
|
| >pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With Staurosporine Length = 283 | Back alignment and structure |
|
| >pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine Length = 267 | Back alignment and structure |
|
| >pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306 | Back alignment and structure |
|
| >pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450 | Back alignment and structure |
|
| >pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306 | Back alignment and structure |
|
| >pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453 | Back alignment and structure |
|
| >pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319 | Back alignment and structure |
|
| >pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains. Length = 656 | Back alignment and structure |
|
| >pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327 | Back alignment and structure |
|
| >pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In Complex With Amppnp Length = 334 | Back alignment and structure |
|
| >pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334 | Back alignment and structure |
|
| >pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315 | Back alignment and structure |
|
| >pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In Complex With Aee788 Length = 327 | Back alignment and structure |
|
| >pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400 | Back alignment and structure |
|
| >pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic Mutant L858r Egfr Kinase Domain Length = 329 | Back alignment and structure |
|
| >pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The Kinase Domain Of Focal Adhesion Kinase With A Phosphorylated Activation Loop Length = 276 | Back alignment and structure |
|
| >pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396 | Back alignment and structure |
|
| >pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318 | Back alignment and structure |
|
| >pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 269 | Back alignment and structure |
|
| >pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327 | Back alignment and structure |
|
| >pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120 Length = 316 | Back alignment and structure |
|
| >pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311 | Back alignment and structure |
|
| >pdb|2EBM|A Chain A, Solution Structure Of The Rwd Domain Of Human Rwd Domain Containing Protein 1 Length = 128 | Back alignment and structure |
|
| >pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase Domain Length = 317 | Back alignment and structure |
|
| >pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain Of Csf-1r Length = 329 | Back alignment and structure |
|
| >pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335 | Back alignment and structure |
|
| >pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Complexed With The Inhibitor Pp1 Length = 314 | Back alignment and structure |
|
| >pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase Containing The Ferm And Kinase Domains Length = 656 | Back alignment and structure |
|
| >pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319 | Back alignment and structure |
|
| >pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353 | Back alignment and structure |
|
| >pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325 | Back alignment and structure |
|
| >pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a Length = 293 | Back alignment and structure |
|
| >pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine Kinase Domain Length = 314 | Back alignment and structure |
|
| >pdb|1UKX|A Chain A, Solution Structure Of The Rwd Domain Of Mouse Gcn2 Length = 137 | Back alignment and structure |
|
| >pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 2-Anilino-5-Aryl-Oxazole Inhibitor Length = 366 | Back alignment and structure |
|
| >pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine Kinase 2 Beta (ptk2b) Length = 281 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1170 | |||
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 1e-109 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 1e-105 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 1e-100 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 8e-88 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 6e-68 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 2e-62 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 2e-61 | |
| 4apc_A | 350 | Serine/threonine-protein kinase NEK1; transferase; | 2e-60 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 4e-60 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 4e-57 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 3e-50 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 9e-49 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 1e-48 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 3e-48 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 1e-47 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 2e-47 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 2e-46 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 6e-46 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 2e-45 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 3e-45 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 3e-45 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 3e-45 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 5e-45 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 1e-44 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 2e-44 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 3e-44 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 5e-44 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 1e-43 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 9e-42 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 9e-42 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 9e-42 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 4e-41 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 4e-41 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 5e-41 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 5e-41 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 1e-40 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 3e-40 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 5e-40 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 2e-39 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 6e-39 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 8e-39 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 1e-38 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 2e-38 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 3e-38 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 3e-38 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 3e-38 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 3e-38 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 5e-38 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 5e-38 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 7e-38 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 1e-37 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 1e-37 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 2e-37 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 2e-37 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 2e-37 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 2e-37 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 3e-37 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 5e-37 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 6e-37 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 7e-37 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 7e-37 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 1e-36 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 1e-36 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 2e-36 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 2e-36 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 3e-36 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 3e-36 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 4e-36 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 4e-36 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 4e-36 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 4e-36 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 4e-36 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 5e-36 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 5e-36 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 8e-36 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 2e-35 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 2e-35 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 3e-35 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 4e-35 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 5e-35 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 6e-35 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 7e-35 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 7e-35 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 7e-35 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 8e-35 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 1e-34 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 2e-34 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 2e-34 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 2e-34 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 3e-34 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 5e-34 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 6e-34 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 7e-34 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 1e-33 | |
| 3net_A | 465 | Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas | 4e-33 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 8e-33 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 1e-32 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 1e-32 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 2e-32 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 2e-32 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 3e-32 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 3e-32 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 3e-32 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 4e-32 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 6e-32 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 3e-31 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 4e-31 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 5e-31 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 7e-31 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 9e-31 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 9e-31 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 1e-30 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 2e-30 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 2e-30 | |
| 1uu3_A | 310 | HPDK1, 3-phosphoinositide dependent protein kinase | 2e-30 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 4e-30 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 5e-30 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 8e-30 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 1e-29 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 1e-29 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 2e-29 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 3e-29 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 4e-29 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 5e-29 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 5e-29 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 6e-29 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 1e-28 | |
| 3lc0_A | 456 | Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t | 1e-28 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 1e-28 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 2e-28 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 2e-28 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 3e-28 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 3e-28 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 4e-28 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 6e-28 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 6e-28 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 9e-28 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 4e-26 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 5e-26 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 5e-26 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 7e-26 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 1e-25 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 2e-25 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 3e-25 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 4e-25 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 4e-25 | |
| 3pvu_A | 695 | Beta-adrenergic receptor kinase 1; transferase, se | 7e-25 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 2e-24 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 2e-24 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 4e-24 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 4e-24 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 7e-24 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 2e-23 | |
| 3g51_A | 325 | Ribosomal protein S6 kinase alpha-3; N-terminal ki | 2e-22 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 2e-22 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 4e-22 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 5e-22 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 9e-22 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 2e-21 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 2e-21 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 3e-21 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 4e-21 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 3e-20 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 4e-20 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 1e-19 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 2e-19 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 2e-19 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 2e-19 | |
| 1wu7_A | 434 | Histidyl-tRNA synthetase; ligase, structural genom | 4e-19 | |
| 3od1_A | 400 | ATP phosphoribosyltransferase regulatory subunit; | 2e-18 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 1e-17 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 3e-17 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 4e-17 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 4e-17 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 2e-16 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 2e-16 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 1e-15 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 1e-15 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 6e-15 | |
| 3rac_A | 373 | Histidine-tRNA ligase; structural genomics, PSI-bi | 6e-15 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 7e-15 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 2e-14 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 1e-07 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 2e-14 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 3e-14 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 4e-14 | |
| 1ukx_A | 137 | GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple | 6e-14 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 6e-14 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 4e-04 | |
| 2ebm_A | 128 | RWD domain-containing protein 1; alpha+beta sandwi | 1e-13 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 1e-13 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 1e-13 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 2e-13 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 1e-05 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 2e-13 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 2e-06 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 2e-13 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 2e-13 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 3e-13 | |
| 3v5q_A | 297 | NT-3 growth factor receptor; kinase domain, kinase | 3e-13 | |
| 1usy_A | 275 | ATP phosphoribosyltransferase regulatory subunit; | 6e-13 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 6e-13 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 1e-12 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 1e-12 | |
| 2day_A | 128 | Ring finger protein 25; ligase, metal-binding, UB1 | 1e-12 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 1e-12 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 2e-12 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 2e-12 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 2e-12 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 2e-12 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 3e-12 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 3e-12 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 3e-12 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 3e-12 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 4e-12 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 4e-12 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 4e-12 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 6e-12 | |
| 2ebk_A | 128 | RWD domain-containing protein 3; alpha+beta sandwi | 6e-12 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 6e-12 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 8e-12 | |
| 2yz0_A | 138 | Serine/threonine-protein kinase GCN2; A-B-B-B-B-A- | 9e-12 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 1e-11 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 1e-11 | |
| 3zzw_A | 289 | Tyrosine-protein kinase transmembrane receptor RO; | 2e-11 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 2e-11 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 2e-11 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 2e-11 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 3e-11 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 4e-11 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 5e-11 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 8e-11 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 8e-11 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 9e-11 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 1e-10 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 1e-10 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 1e-10 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 2e-10 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 2e-10 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 2e-10 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 3e-10 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 3e-10 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 4e-10 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 7e-10 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 7e-10 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 2e-09 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 2e-09 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 4e-09 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 4e-09 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 1e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 4e-06 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-05 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 1e-08 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 1e-04 |
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332 | Back alignment and structure |
|---|
Score = 344 bits (883), Expect = e-109
Identities = 108/334 (32%), Positives = 181/334 (54%), Gaps = 27/334 (8%)
Query: 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 409
+SRYL DFE +Q +G GGFG V KNK+D +YA+K+IRL ++ ++++REV L+
Sbjct: 1 ASRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRE-LAREKVMREVKALA 59
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES--- 466
+L+H +VRY+ AW ET + + S+ + + S D + +
Sbjct: 60 KLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFS 119
Query: 467 --------------TYLYIQMEYCPR-TLRQVFESYDHF---DKELAWHLFRQIVEGLAH 508
YLYIQM+ C + L+ + + H+F QI E +
Sbjct: 120 TKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEF 179
Query: 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568
+H +G++HRDL P+NIFF + +K+GDFGL + ++ +Q P TGQ
Sbjct: 180 LHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYA---THTGQ 236
Query: 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS 628
VGT Y +PE G K D++SLG++ FEL + FST MER +++D++ + P
Sbjct: 237 VGTKLYMSPEQIHGNN-YSHKVDIFSLGLILFELLYSFSTQMERVRIITDVR-NLKFPLL 294
Query: 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662
+ K+ ++ +++ ++SPSP++RP AT+++++A+
Sbjct: 295 FTQKYPQEHMMVQDMLSPSPTERPEATDIIENAI 328
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303 | Back alignment and structure |
|---|
Score = 331 bits (852), Expect = e-105
Identities = 130/334 (38%), Positives = 175/334 (52%), Gaps = 36/334 (10%)
Query: 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 409
S RY +DFEE+ LG G FG VV +N LD R+YA+KKIR ++ L IL EV L+
Sbjct: 1 SLRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKL---STILSEVMLLA 57
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
L HQ+VVRYY AW E V + + L
Sbjct: 58 SLNHQYVVRYYAAWLE---------------------------RRNFVKPMTAVKKKSTL 90
Query: 470 YIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
+IQMEYC TL + S + + ++ W LFRQI+E L++IH QGIIHRDL P NIF D
Sbjct: 91 FIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID 150
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
++KIGDFGLAK + LD + G S + T +GT Y A E+ G +
Sbjct: 151 ESRNVKIGDFGLAKNVH-RSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYN 209
Query: 588 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPS--WVAKFSEQESLLRRLMS 645
EK DMYSLGI+FFE+ +PFST MER +L L+ P K ++ ++R L+
Sbjct: 210 EKIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLID 269
Query: 646 PSPSDRPSATELLQDA-LPPQMEYELLDNILRMM 678
P+ RP A LL LP + + E++ L+ +
Sbjct: 270 HDPNKRPGARTLLNSGWLPVKHQDEVIKEALKSL 303
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299 | Back alignment and structure |
|---|
Score = 318 bits (818), Expect = e-100
Identities = 106/315 (33%), Positives = 168/315 (53%), Gaps = 38/315 (12%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 411
RYL DFE +Q LG GGFG V KNK+D +YA+K+IRL ++ L ++++REV L++L
Sbjct: 2 RYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAR-EKVMREVKALAKL 60
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+H +VRY+ AW E + YLYI
Sbjct: 61 EHPGIVRYFNAWLEKN----------------------------TTEKLQPSSPKVYLYI 92
Query: 472 QMEYCPR-TLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
QM+ C + L+ + + ++ + H+F QI E + +H +G++HRDL P+NIFF
Sbjct: 93 QMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT 152
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
+ +K+GDFGL + D++ TGQVGT Y +PE G
Sbjct: 153 MDDVVKVGDFGLVTAMD---QDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS-YS 208
Query: 588 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647
K D++SLG++ FEL +PFST MER L+D++ + PP + K+ + +++ ++SPS
Sbjct: 209 HKVDIFSLGLILFELLYPFSTQMERVRTLTDVR-NLKFPPLFTQKYPCEYVMVQDMLSPS 267
Query: 648 PSDRPSATELLQDAL 662
P +RP A ++++A+
Sbjct: 268 PMERPEAINIIENAV 282
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284 | Back alignment and structure |
|---|
Score = 284 bits (729), Expect = 8e-88
Identities = 92/313 (29%), Positives = 147/313 (46%), Gaps = 54/313 (17%)
Query: 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 410
R+ DF+E++ +G GGFG V K+++DG+ Y +K+++ N++ REV L++
Sbjct: 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYN------NEKAEREVKALAK 60
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
L H ++V Y W + ++ ++ L+
Sbjct: 61 LDHVNIVHYNGCWDGFD------------------------YDPETSSKNSSRSKTKCLF 96
Query: 471 IQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
IQME+C + TL Q E + DK LA LF QI +G+ +IH + +I+RDL P+NIF
Sbjct: 97 IQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV 156
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
+KIGDFGL L D GT Y +PE
Sbjct: 157 DTKQVKIGDFGLVT-----SLKNDGKRTR-----------SKGTLRYMSPEQISSQD-YG 199
Query: 588 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647
++ D+Y+LG++ EL H TA E +DL+ G + + K +LL++L+S
Sbjct: 200 KEVDLYALGLILAELLHVCDTAFETSKFFTDLR-DGIISDIFDKKEK---TLLQKLLSKK 255
Query: 648 PSDRPSATELLQD 660
P DRP+ +E+L+
Sbjct: 256 PEDRPNTSEILRT 268
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 230 bits (588), Expect = 6e-68
Identities = 100/361 (27%), Positives = 144/361 (39%), Gaps = 76/361 (21%)
Query: 311 SSQFNKTFNQVFHQKM--VSSRVSQFW---KPSVDSGSPNMSLPSSRYLNDFEELQPLGH 365
SS + ++ Q M + R F ++ S + S P S + F+ L LGH
Sbjct: 8 SSGVDLGTENLYFQSMHQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGH 67
Query: 366 GGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWF 424
G +G V ++K DGR YAVK+ + R L EV + ++ QH VR QAW
Sbjct: 68 GSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWE 127
Query: 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF 484
E G LY+Q E C +L+Q
Sbjct: 128 EGG----------------------------------------ILYLQTELCGPSLQQHC 147
Query: 485 ESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543
E++ + W R + LAH+H QG++H D+ P NIF R K+GDFGL
Sbjct: 148 EAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLV-- 205
Query: 544 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL- 602
+L A Q G Y APE+ QG AD++SLG+ E+
Sbjct: 206 ---ELGTAGAGEV-----------QEGDPRYMAPELLQG--SYGTAADVFSLGLTILEVA 249
Query: 603 ---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELL 658
P +Q+ +G LPP + A S + S+L ++ P P R +A LL
Sbjct: 250 CNMELPHGGEGWQQLR------QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALL 303
Query: 659 Q 659
Sbjct: 304 A 304
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310 | Back alignment and structure |
|---|
Score = 214 bits (547), Expect = 2e-62
Identities = 72/356 (20%), Positives = 124/356 (34%), Gaps = 71/356 (19%)
Query: 337 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 396
P L +F + +G G F V LDG A+KK+++ D
Sbjct: 14 PQFQPQKALRPDMGYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDA 73
Query: 397 VNDR--ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 454
R ++E+ L +L H +V++YY ++ E
Sbjct: 74 -KARADCIKEIDLLKQLNHPNVIKYYASFIEDN--------------------------- 105
Query: 455 ADVTGQENKLESTYLYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509
L I +E R ++ + + W F Q+ L H+
Sbjct: 106 -------------ELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHM 152
Query: 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569
H + ++HRD+ P N+F A +K+GD GL + V
Sbjct: 153 HSRRVMHRDIKPANVFITATGVVKLGDLGLGR-----FFSSKTTAAHS----------LV 197
Query: 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP 626
GT +Y +PE + K+D++SLG + +E+ PF L ++ + P
Sbjct: 198 GTPYYMSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCDYP 256
Query: 627 PSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSS 681
P +SE+ L+ ++P P RP T + + + + L H
Sbjct: 257 PLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV---AKRMHACTASSLEHHHHH 309
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289 | Back alignment and structure |
|---|
Score = 210 bits (537), Expect = 2e-61
Identities = 80/347 (23%), Positives = 124/347 (35%), Gaps = 97/347 (27%)
Query: 342 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 401
G+ M SRY +F EL+ +G G FG V C +LDG YA+K+ +
Sbjct: 1 GAMGMK---SRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNA 57
Query: 402 LREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 460
LREV + L QH HVVRY+ AW E
Sbjct: 58 LREVYAHAVLGQHSHVVRYFSAWAEDD--------------------------------- 84
Query: 461 ENKLESTYLYIQMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515
++ IQ EYC + + + +F + L Q+ GL +IH ++
Sbjct: 85 -------HMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLV 137
Query: 516 HRDLTPNNIFFDARNDI-------------------KIGDFGLAKFLKLEQLDQDAAFPT 556
H D+ P+NIF + KIGD G + Q+
Sbjct: 138 HMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQV-------- 189
Query: 557 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQ 613
+ G + A E+ Q KAD+++L + +
Sbjct: 190 -----------EEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWH 238
Query: 614 IVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ 659
+ ++G LP S++ LL+ ++ P P RPSA L++
Sbjct: 239 EI-----RQGRLPRI-PQVLSQEFTELLKVMIHPDPERRPSAMALVK 279
|
| >4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350 | Back alignment and structure |
|---|
Score = 210 bits (536), Expect = 2e-60
Identities = 88/332 (26%), Positives = 142/332 (42%), Gaps = 71/332 (21%)
Query: 336 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 395
VD G+ N+ S + + LQ +G G FG +L K+ DGR Y +K+I + S
Sbjct: 8 SSGVDLGTENLYFQS---MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSS 64
Query: 396 PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 455
+ REVA L+ ++H ++V+Y +++
Sbjct: 65 KEREESRREVAVLANMKHPNIVQYRESF-------------------------------- 92
Query: 456 DVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQ 512
E+ LYI M+YC L + + F ++ F QI L H+H +
Sbjct: 93 --------EENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDR 144
Query: 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572
I+HRD+ NIF +++GDFG+A+ L+ +GT
Sbjct: 145 KILHRDIKSQNIFLTKDGTVQLGDFGIAR-----VLNSTVEL-ARA---------CIGTP 189
Query: 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK-QKGELPPS 628
+Y +PEI + P + K+D+++LG V +EL H F + +V LK G PP
Sbjct: 190 YYLSPEICENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLV---LKIISGSFPP- 244
Query: 629 WVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ 659
+S SL+ +L +P DRPS +L+
Sbjct: 245 VSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279 | Back alignment and structure |
|---|
Score = 206 bits (527), Expect = 4e-60
Identities = 77/322 (23%), Positives = 137/322 (42%), Gaps = 73/322 (22%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
D+E L +G G +G + K DG+ K++ + ++ EV L L+H
Sbjct: 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKH 64
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++VRYY + +T LYI M
Sbjct: 65 PNIVRYYDRIIDR--------------------------------------TNTTLYIVM 86
Query: 474 EYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-----GQGIIHRDLTPNN 523
EYC + + + + D+E + Q+ L H G ++HRDL P N
Sbjct: 87 EYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPAN 146
Query: 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583
+F D + ++K+GDFGLA+ L+ D +F T VGT +Y +PE
Sbjct: 147 VFLDGKQNVKLGDFGLAR-----ILNHDTSF-AKT---------FVGTPYYMSPEQMNRM 191
Query: 584 PKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK-QKGELPPSWVAKFSEQ-ES 638
+EK+D++SLG + +EL PF+ ++++ K ++G+ ++S++
Sbjct: 192 S-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELA---GKIREGKFRR-IPYRYSDELNE 246
Query: 639 LLRRLMSPSPSDRPSATELLQD 660
++ R+++ RPS E+L++
Sbjct: 247 IITRMLNLKDYHRPSVEEILEN 268
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317 | Back alignment and structure |
|---|
Score = 199 bits (508), Expect = 4e-57
Identities = 69/350 (19%), Positives = 111/350 (31%), Gaps = 65/350 (18%)
Query: 336 KPSVDSGSPNMSLPSSRY---LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD 392
SG N+ + +Q LG GGF +V L + DG YA+K+I +
Sbjct: 7 HHHHSSGRENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE 66
Query: 393 KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 452
+ + RE H +++R
Sbjct: 67 QQ--DREEAQREADMHRLFNHPNILRLVAYCLRE-------------------------- 98
Query: 453 SSADVTGQENKLESTYLYIQMEYCPR-----TLRQVFESYDHFDKELAWHLFRQIVEGLA 507
+ ++ + + R + ++ + + ++ L I GL
Sbjct: 99 ----------RGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLE 148
Query: 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 567
IH +G HRDL P NI + D G + A D
Sbjct: 149 AIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQ------DWAA 202
Query: 568 QVGTYFYTAPEIEQGWP--KIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQK 622
Q T Y APE+ IDE+ D++SLG V + + P+ ++ ++ Q
Sbjct: 203 QRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQN 262
Query: 623 GELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELL------QDALPPQ 665
P + S LL +M+ P RP LL Q P Q
Sbjct: 263 QLSIPQS-PRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPGQ 311
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 180 bits (458), Expect = 3e-50
Identities = 67/314 (21%), Positives = 121/314 (38%), Gaps = 53/314 (16%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQH 415
+ L GGF V ++ GR YA+K++ ++ N I++EV + +L H +
Sbjct: 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEE--KNRAIIQEVCFMKKLSGHPN 87
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V++ S+A + +E+ + E
Sbjct: 88 IVQFC--------------------------------SAASIGKEESDTGQAEFLLLTEL 115
Query: 476 CPRTLRQVFESY---DHFDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDARN 530
C L + + + +F Q + H+H Q IIHRDL N+ +
Sbjct: 116 CKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQG 175
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDE 588
IK+ DFG A + D ++ + + + T Y PEI + I E
Sbjct: 176 TIKLCDFGSATTI---SHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGE 232
Query: 589 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645
K D+++LG + + L HPF + +IV P +++ SL+R ++
Sbjct: 233 KQDIWALGCILYLLCFRQHPFEDGAKLRIVNGKYS-----IPPHDTQYTVFHSLIRAMLQ 287
Query: 646 PSPSDRPSATELLQ 659
+P +R S E++
Sbjct: 288 VNPEERLSIAEVVH 301
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 9e-49
Identities = 77/317 (24%), Positives = 116/317 (36%), Gaps = 71/317 (22%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQ 414
F LGHG G +V + D R AVK+I + REV L +H
Sbjct: 25 SFCPKDVLGHGAEGTIV-YRGMFDNRDVAVKRILPEC-----FSFADREVQLLRESDEHP 78
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+V+RY+ + + YI +E
Sbjct: 79 NVIRYFCT-EKD---------------------------------------RQFQYIAIE 98
Query: 475 YCPRTLRQVFESYDHFDKEL-AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 531
C TL++ E D L L +Q GLAH+H I+HRDL P+NI N
Sbjct: 99 LCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHG 158
Query: 532 ---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI-- 586
I DFGL K L + + +G GT + APE+ K
Sbjct: 159 KIKAMISDFGLCKKLAVGRHSFSRR------------SGVPGTEGWIAPEMLSEDCKENP 206
Query: 587 DEKADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642
D++S G VF+ + HPF +++RQ + + + L+ +
Sbjct: 207 TYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEK 266
Query: 643 LMSPSPSDRPSATELLQ 659
+++ P RPSA +L+
Sbjct: 267 MIAMDPQKRPSAKHVLK 283
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 1e-48
Identities = 86/352 (24%), Positives = 129/352 (36%), Gaps = 90/352 (25%)
Query: 341 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR 400
S N+ N + LG+G G VV GR AVK++ L D D
Sbjct: 1 SRIANIPNFEQSLKNLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRM-LIDF----CDI 54
Query: 401 ILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 459
L E+ L+ H +V+RYY + T
Sbjct: 55 ALMEIKLLTESDDHPNVIRYYCS-ETT--------------------------------- 80
Query: 460 QENKLESTYLYIQMEYCPRTLRQVFESYDHFDKEL-------AWHLFRQIVEGLAHIHGQ 512
+LYI +E C L+ + ES + D+ L L RQI G+AH+H
Sbjct: 81 ------DRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL 134
Query: 513 GIIHRDLTPNNIFFDARND-------------IKIGDFGLAKFLKLEQLDQDAAFPTDTG 559
IIHRDL P NI + I I DFGL K L ++F T+
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD----SGQSSFRTNLN 190
Query: 560 GVSVDGTGQVGTYFYTAPEI------EQGWPKIDEKADMYSLGIVFFEL----WHPFS-- 607
GT + APE+ Q ++ D++S+G VF+ + HPF
Sbjct: 191 NP-------SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDK 243
Query: 608 TAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
+ E I+ + +E L+ +++ P RP+A ++L+
Sbjct: 244 YSRESNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLR 295
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390 | Back alignment and structure |
|---|
Score = 176 bits (448), Expect = 3e-48
Identities = 79/436 (18%), Positives = 141/436 (32%), Gaps = 83/436 (19%)
Query: 300 SERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEE 359
L + S + Q M S + D S + + S +
Sbjct: 4 HHHSSGLVPRGSGMKETAAAKFERQHMDSPDLGT---DDDDKASSSANECISVKGRIYSI 60
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVV 417
L+ +G GG V N+ + YA+K + L++ D E+A L++LQ ++
Sbjct: 61 LKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKII 119
Query: 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 477
R Y + T Y+Y+ ME
Sbjct: 120 RLYD-YEIT---------------------------------------DQYIYMVMECGN 139
Query: 478 RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 537
L + D ++ ++E + IH GI+H DL P N +K+ DF
Sbjct: 140 IDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDF 198
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----------EQGWPKID 587
G+A DT V D QVG Y PE + KI
Sbjct: 199 GIAN-----------QMQPDTTSVVKD--SQVGAVNYMPPEAIKDMSSSRENGKSKSKIS 245
Query: 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644
K+D++SLG + + + + PF + + L + + + +L+ +
Sbjct: 246 PKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCL 305
Query: 645 SPSPSDRPSATELLQD----------ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 694
P R S ELL + E + +L + + K ++
Sbjct: 306 KRDPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILKAAKTL 365
Query: 695 FDEETLDMKHHAGTLR 710
++ + H++ + +
Sbjct: 366 YEHYSGGESHNSSSSK 381
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313 | Back alignment and structure |
|---|
Score = 172 bits (437), Expect = 1e-47
Identities = 71/340 (20%), Positives = 117/340 (34%), Gaps = 73/340 (21%)
Query: 338 SVDSGSPNMSLPSSRYLN-DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 396
VD G+ N+ S + L+ +G GG V N+ + YA+K + L++
Sbjct: 10 GVDLGTENLYFQSMSVKGRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQ 68
Query: 397 VNDRILREVATLSRLQH--QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 454
D E+A L++LQ ++R Y + T
Sbjct: 69 TLDSYRNEIAYLNKLQQHSDKIIRLYD-YEIT---------------------------- 99
Query: 455 ADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514
Y+Y+ ME L + D ++ ++E + IH GI
Sbjct: 100 -----------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGI 148
Query: 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574
+H DL P N +K+ DFG+A + SV QVGT Y
Sbjct: 149 VHSDLKPANFLIV-DGMLKLIDFGIANQM-------------QPDTTSVVKDSQVGTVNY 194
Query: 575 TAPEI----------EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ 621
PE + KI K+D++SLG + + + + PF + + L +
Sbjct: 195 MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID 254
Query: 622 KGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
+ + +L+ + P R S ELL
Sbjct: 255 PNHEIEFP-DIPEKDLQDVLKCCLKRDPKQRISIPELLAH 293
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343 | Back alignment and structure |
|---|
Score = 172 bits (438), Expect = 2e-47
Identities = 66/321 (20%), Positives = 110/321 (34%), Gaps = 70/321 (21%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH- 413
+ L+ +G GG V N+ + YA+K + L++ D E+A L++LQ
Sbjct: 9 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQH 67
Query: 414 -QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
++R Y + T Y+Y+
Sbjct: 68 SDKIIRLYD-YEIT---------------------------------------DQYIYMV 87
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
ME L + D ++ ++E + IH GI+H DL P N +
Sbjct: 88 MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGML 146
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----------EQG 582
K+ DFG+A + SV QVGT Y PE +
Sbjct: 147 KLIDFGIANQM-------------QPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKS 193
Query: 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639
KI K+D++SLG + + + + PF + + L + + + +
Sbjct: 194 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDV 253
Query: 640 LRRLMSPSPSDRPSATELLQD 660
L+ + P R S ELL
Sbjct: 254 LKCCLKRDPKQRISIPELLAH 274
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494 | Back alignment and structure |
|---|
Score = 173 bits (441), Expect = 2e-46
Identities = 79/350 (22%), Positives = 142/350 (40%), Gaps = 68/350 (19%)
Query: 321 VFHQKMVSSRVSQFWKPSVDSGSPNMSL--PSSRYLNDFEELQPLGHGGFGHVVLCKNKL 378
+ H SS + +P M + ++ ++ LG G +G V+LC++K+
Sbjct: 1 MHHHHHHSSGRENLYFQGDLQATPGMFITSKKGHLSEMYQRVKKLGSGAYGEVLLCRDKV 60
Query: 379 DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438
A+K IR S N ++L EVA L L H ++++ Y FE
Sbjct: 61 THVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF-FE------------- 106
Query: 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWH 497
+ Y+ ME L F++ A
Sbjct: 107 --------------------------DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV 140
Query: 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAF 554
+ +Q++ G+ ++H I+HRDL P N+ +++ IKI DFGL+ + ++ ++
Sbjct: 141 IIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER-- 198
Query: 555 PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAME 611
+GT +Y APE+ + K DEK D++S+G++ F L PF +
Sbjct: 199 --------------LGTAYYIAPEVLRK--KYDEKCDVWSIGVILFILLAGYPPFGGQTD 242
Query: 612 RQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
++I+ K K SE + L+++++ R SA + L+
Sbjct: 243 QEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEH 292
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290 | Back alignment and structure |
|---|
Score = 166 bits (422), Expect = 6e-46
Identities = 67/321 (20%), Positives = 114/321 (35%), Gaps = 69/321 (21%)
Query: 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL 408
R+L E+ G G F V + A +++ + + R E L
Sbjct: 23 NDGRFLKFDIEI---GRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML 79
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
LQH ++VR+Y +W T
Sbjct: 80 KGLQHPNIVRFYDSWEST------------------------------------VKGKKC 103
Query: 469 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIF 525
+ + E TL+ + + ++ RQI++GL +H + IIHRDL +NIF
Sbjct: 104 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF 163
Query: 526 FDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGW 583
+KIGD GLA + +V +GT + APE E+ +
Sbjct: 164 ITGPTGSVKIGDLGLATLK------------RASFAKAV-----IGTPEFMAPEMYEEKY 206
Query: 584 PKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFS-EQESL 639
DE D+Y+ G+ E+ +P+S + + G P S+ E + +
Sbjct: 207 ---DESVDVYAFGMCMLEMATSEYPYSE-CQNAAQIYRRVTSGVKPASFDKVAIPEVKEI 262
Query: 640 LRRLMSPSPSDRPSATELLQD 660
+ + + +R S +LL
Sbjct: 263 IEGCIRQNKDERYSIKDLLNH 283
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 2e-45
Identities = 72/326 (22%), Positives = 126/326 (38%), Gaps = 78/326 (23%)
Query: 347 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREV 405
L R + + LG GGF + +A K + + +++ E+
Sbjct: 7 VLVDPRSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI 66
Query: 406 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
+ L HQHVV ++ +FE
Sbjct: 67 SIHRSLAHQHVVGFHG-FFED--------------------------------------- 86
Query: 466 STYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 524
+ ++++ +E C R +L ++ + + A + RQIV G ++H +IHRDL N+
Sbjct: 87 NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNL 146
Query: 525 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQG 582
F + ++KIGDFGLA +++ D GT Y APE+ ++G
Sbjct: 147 FLNEDLEVKIGDFGLAT-----KVEYDGERKKVLC----------GTPNYIAPEVLSKKG 191
Query: 583 WPKIDEKADMYSLGIVFFEL---WHPFST----AMERQIVLSDLKQKGELP-PSWVAKFS 634
+ D++S+G + + L PF T +I K E P +
Sbjct: 192 H---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK------KNEYSIPKHIN--P 240
Query: 635 EQESLLRRLMSPSPSDRPSATELLQD 660
SL+++++ P+ RP+ ELL D
Sbjct: 241 VAASLIQKMLQTDPTARPTINELLND 266
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484 | Back alignment and structure |
|---|
Score = 170 bits (432), Expect = 3e-45
Identities = 82/324 (25%), Positives = 141/324 (43%), Gaps = 67/324 (20%)
Query: 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILRE 404
+ ++ + + ++ + LG G FG V+LCK+K+ G+ AVK I + + + +LRE
Sbjct: 17 VQHSTAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLRE 76
Query: 405 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 464
V L +L H ++++ Y+ FE
Sbjct: 77 VQLLKQLDHPNIMKLYEF-FE--------------------------------------- 96
Query: 465 ESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
+ Y Y+ E L S F + A + RQ++ G+ ++H I+HRDL P N
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPEN 156
Query: 524 IFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580
+ ++++ I+I DFGL+ + + +D +GT +Y APE+
Sbjct: 157 LLLESKSKDANIRIIDFGLSTHFEASKKMKDK----------------IGTAYYIAPEVL 200
Query: 581 QGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ- 636
G DEK D++S G++ + L PF+ A E I+ K K K SE
Sbjct: 201 HG--TYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESA 258
Query: 637 ESLLRRLMSPSPSDRPSATELLQD 660
+ L+R++++ PS R SA + L
Sbjct: 259 KDLIRKMLTYVPSMRISARDALDH 282
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 163 bits (416), Expect = 3e-45
Identities = 76/324 (23%), Positives = 127/324 (39%), Gaps = 76/324 (23%)
Query: 347 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILRE 404
S L DFE +PLG G FG+V L + K A+K + K + V ++ RE
Sbjct: 1 SKKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLF-KAQLEKAGVEHQLRRE 59
Query: 405 VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 464
V S L+H +++R Y +F
Sbjct: 60 VEIQSHLRHPNILRLYG-YFHD-------------------------------------- 80
Query: 465 ESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
+T +Y+ +EY P T+ + + FD++ ++ L++ H + +IHRD+ P N
Sbjct: 81 -ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPEN 139
Query: 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583
+ + ++KI DFG + + GT Y PE+ +G
Sbjct: 140 LLLGSAGELKIADFGWSVHAPSSRRT------D-----------LCGTLDYLPPEMIEGR 182
Query: 584 PKIDEKADMYSLGIVFFELWH---PFST----AMERQIVLSDLKQKGELPPSWVAKFSEQ 636
DEK D++SLG++ +E PF ++I + P +V
Sbjct: 183 MH-DEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTF-----PDFVT--EGA 234
Query: 637 ESLLRRLMSPSPSDRPSATELLQD 660
L+ RL+ +PS RP E+L+
Sbjct: 235 RDLISRLLKHNPSQRPMLREVLEH 258
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371 | Back alignment and structure |
|---|
Score = 167 bits (423), Expect = 3e-45
Identities = 44/317 (13%), Positives = 88/317 (27%), Gaps = 50/317 (15%)
Query: 362 PLGHGGFGHVVLCKNKLDGRHYAVKKIRL-KDKSLPVNDRILREVATLSRLQHQHVVRYY 420
PL G V L ++ +A+K + + S +R+ +RL +
Sbjct: 69 PLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEAR 128
Query: 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 480
+D + + S + + D N + M L
Sbjct: 129 DRRRLLLPSD--------AVAVQSQPPFAQLSPGQDDYAVAN------YLLLMPAASVDL 174
Query: 481 RQVFESYDHFDK-------ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
+F + D L Q++ A++ +G++H TP+N+F +
Sbjct: 175 ELLFSTLDFVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIMPDGRLM 234
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI-EQGWPKIDEKADM 592
+GD V G Y E +
Sbjct: 235 LGDVSALW------------------KVGTRGPASSVPVTYAPREFLNASTATFTHALNA 276
Query: 593 YSLGIVFFELW---HPF-----STAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRL 643
+ LG+ + +W PF + + L + ++L+ R
Sbjct: 277 WQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRF 336
Query: 644 MSPSPSDRPSATELLQD 660
++ R E ++
Sbjct: 337 LNFDRRRRLLPLEAMET 353
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335 | Back alignment and structure |
|---|
Score = 165 bits (419), Expect = 5e-45
Identities = 74/349 (21%), Positives = 133/349 (38%), Gaps = 80/349 (22%)
Query: 324 QKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY 383
V++ + P + P S + + LG GGF + +
Sbjct: 12 VPGVAAPGAPAAAPPAKEIPEVLVDPRS--RRRYVRGRFLGKGGFAKCFEISDADTKEVF 69
Query: 384 AVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTL 442
A K + + +++ E++ L HQHVV ++ +FE
Sbjct: 70 AGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG-FFED---------------- 112
Query: 443 ASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQ 501
+ ++++ +E C R +L ++ + + A + RQ
Sbjct: 113 -----------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQ 149
Query: 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 561
IV G ++H +IHRDL N+F + ++KIGDFGLA +++ D
Sbjct: 150 IVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLAT-----KVEYDGERKKVLC-- 202
Query: 562 SVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFST----AMER 612
GT Y APE+ ++G + D++S+G + + L PF T
Sbjct: 203 --------GTPNYIAPEVLSKKGH---SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYL 251
Query: 613 QIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
+I +K E P + SL+++++ P+ RP+ ELL D
Sbjct: 252 RI------KKNEYSIPKHIN--PVAASLIQKMLQTDPTARPTINELLND 292
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345 | Back alignment and structure |
|---|
Score = 164 bits (417), Expect = 1e-44
Identities = 65/329 (19%), Positives = 115/329 (34%), Gaps = 34/329 (10%)
Query: 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREV 405
+ +G G +G V + A+K + +++ + +RI EV
Sbjct: 20 SLLELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEV 79
Query: 406 ATLSRLQHQHVVRYYQAWFETG-----VADFDGDSMWGSGTLAS--STFSNRAASSADVT 458
+ +L H ++ R Y+ +E V + G G L + F + + +
Sbjct: 80 RLMKKLHHPNIARLYEV-YEDEQYICLVMEL----CHG-GHLLDKLNVFIDDSTGKCAMD 133
Query: 459 GQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518
+ ++ + ++L ++ RQI L ++H QGI HRD
Sbjct: 134 VVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRD 193
Query: 519 LTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576
+ P N F IK+ DFGL+K + T + GT ++ A
Sbjct: 194 IKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGM-----------TTKAGTPYFVA 242
Query: 577 PEI-EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 632
PE+ K D +S G++ L PF + + L +K
Sbjct: 243 PEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNV 302
Query: 633 FSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
S LL L++ + +R A LQ
Sbjct: 303 LSPLARDLLSNLLNRNVDERFDAMRALQH 331
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486 | Back alignment and structure |
|---|
Score = 167 bits (425), Expect = 2e-44
Identities = 76/319 (23%), Positives = 127/319 (39%), Gaps = 66/319 (20%)
Query: 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 409
+ + + LG G FG V+ CK+++ + YAVK I ILREV L
Sbjct: 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLK 76
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+L H ++++ ++ E +S+
Sbjct: 77 KLDHPNIMKLFEI-LE---------------------------------------DSSSF 96
Query: 470 YIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
YI E L F + A + +Q+ G+ ++H I+HRDL P NI ++
Sbjct: 97 YIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLES 156
Query: 529 RND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585
+ IKI DFGL+ + +D +GT +Y APE+ +G
Sbjct: 157 KEKDCDIKIIDFGLSTCFQQNTKMKDR----------------IGTAYYIAPEVLRG--T 198
Query: 586 IDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLR 641
DEK D++S G++ + L PF E I+ K S+ + L+R
Sbjct: 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIR 258
Query: 642 RLMSPSPSDRPSATELLQD 660
++++ PS R +AT+ L+
Sbjct: 259 KMLTFHPSLRITATQCLEH 277
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278 | Back alignment and structure |
|---|
Score = 161 bits (409), Expect = 3e-44
Identities = 76/338 (22%), Positives = 128/338 (37%), Gaps = 99/338 (29%)
Query: 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRIL 402
++ + DF+ LG G F V ++ G A+K K + + R+
Sbjct: 2 LATCIGEKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAG--MVQRVQ 59
Query: 403 REVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 462
EV +L+H ++ Y +FE
Sbjct: 60 NEVKIHCQLKHPSILELYN-YFED------------------------------------ 82
Query: 463 KLESTYLYIQMEYCPRTLRQVFESYDH-------FDKELAWHLFRQIVEGLAHIHGQGII 515
S Y+Y+ +E C E + F + A H QI+ G+ ++H GI+
Sbjct: 83 ---SNYVYLVLEMCHNG-----EMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGIL 134
Query: 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-----G 570
HRDLT +N+ +IKI DFGLA + + G
Sbjct: 135 HRDLTLSNLLLTRNMNIKIADFGLA--------------------TQLKMPHEKHYTLCG 174
Query: 571 TYFYTAPEIEQGWPKI-DEKADMYSLGIVFFEL---WHPFST----AMERQIVLSDLKQK 622
T Y +PEI ++D++SLG +F+ L PF T ++VL+D +
Sbjct: 175 TPNYISPEIATR--SAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEM- 231
Query: 623 GELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
PS+++ E + L+ +L+ +P+DR S + +L
Sbjct: 232 ----PSFLS--IEAKDLIHQLLRRNPADRLSLSSVLDH 263
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504 | Back alignment and structure |
|---|
Score = 167 bits (424), Expect = 5e-44
Identities = 78/384 (20%), Positives = 147/384 (38%), Gaps = 86/384 (22%)
Query: 323 HQKMVSSRVSQFWKPSVDSGSPNMSL--PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDG 380
H S + + +P M + + + +++ LG G +G V+LCK K
Sbjct: 2 HHHHHHSSGRENLYFQGIAINPGMYVRKKEGKIGESYFKVRKLGSGAYGEVLLCKEKNGH 61
Query: 381 RHYAVKKIRLKDKSLPVN-----------DRILREVATLSRLQHQHVVRYYQAWFETGVA 429
A+K I+ + I E++ L L H ++++ + FE
Sbjct: 62 SEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLF-DVFE---- 116
Query: 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD 488
+ Y Y+ E+ L + +
Sbjct: 117 -----------------------------------DKKYFYLVTEFYEGGELFEQIINRH 141
Query: 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKL 545
FD+ A ++ +QI+ G+ ++H I+HRD+ P NI + +N IKI DFGL+ F
Sbjct: 142 KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSK 201
Query: 546 EQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL--- 602
+ +D +GT +Y APE+ + K +EK D++S G++ + L
Sbjct: 202 DYKLRDR----------------LGTAYYIAPEVLKK--KYNEKCDVWSCGVIMYILLCG 243
Query: 603 WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD- 660
+ PF ++ I+ K K + S++ + L++ +++ + R +A E L
Sbjct: 244 YPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSR 303
Query: 661 ------ALPPQMEYELLDNILRMM 678
+ + + L L M
Sbjct: 304 WIKKYANNINKSDQKTLCGALSNM 327
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285 | Back alignment and structure |
|---|
Score = 159 bits (404), Expect = 1e-43
Identities = 75/332 (22%), Positives = 127/332 (38%), Gaps = 75/332 (22%)
Query: 343 SPNMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 401
S +L ++D + LG G FG V L + + G +K I KD+S ++I
Sbjct: 9 SGRENLYFQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTIN-KDRSQVPMEQI 67
Query: 402 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 461
E+ L L H ++++ ++ FE
Sbjct: 68 EAEIEVLKSLDHPNIIKIFEV-FED----------------------------------- 91
Query: 462 NKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGII 515
+YI ME C R + + L +Q++ LA+ H Q ++
Sbjct: 92 ----YHNMYIVMETCEGGELLER-IVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVV 146
Query: 516 HRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572
H+DL P NI F + IKI DFGLA+ K ++ +A GT
Sbjct: 147 HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA----------------AGTA 190
Query: 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSW 629
Y APE+ + + K D++S G+V + L PF+ ++ ++
Sbjct: 191 LYMAPEVFKR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVEC 248
Query: 630 VAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
+ Q LL+++++ P RPSA ++L
Sbjct: 249 -RPLTPQAVDLLKQMLTKDPERRPSAAQVLHH 279
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 9e-42
Identities = 71/368 (19%), Positives = 127/368 (34%), Gaps = 73/368 (19%)
Query: 300 SERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEE 359
S + LAS + + + + + + ++
Sbjct: 7 SGQAHSLASLAKT----WSSGSAKLQRLGPETEDNEGVLLTEKLKPVDYEYREEVHWMTH 62
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 419
+G G FG V K+K G AVKK+RL+ + E+ + L +V
Sbjct: 63 QPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV-------EELVACAGLSSPRIVPL 115
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R 478
Y G+ E ++ I ME
Sbjct: 116 Y-----------------GA-----------------------VREGPWVNIFMELLEGG 135
Query: 479 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDF 537
+L Q+ + ++ A + Q +EGL ++H + I+H D+ +N+ + + + DF
Sbjct: 136 SLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDF 195
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597
G A L D + G + GT + APE+ G P D K D++S
Sbjct: 196 GHAL-----CLQPDGLGKSLLTGDYI-----PGTETHMAPEVVMGKPC-DAKVDIWSSCC 244
Query: 598 VFFELW---HPFSTAMERQIVL---SDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
+ + HP++ + L S+ E+PPS ++ ++ + P R
Sbjct: 245 MMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQ---AIQEGLRKEPVHR 301
Query: 652 PSATELLQ 659
SA EL +
Sbjct: 302 ASAMELRR 309
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 9e-42
Identities = 70/322 (21%), Positives = 127/322 (39%), Gaps = 86/322 (26%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN--DRILREVATLSRL 411
++DF+ +PLG G FG+V L + K + A+K + K + ++ RE+ S L
Sbjct: 13 IDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLF-KSQLEKEGVEHQLRREIEIQSHL 71
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+H +++R Y +F +Y+
Sbjct: 72 RHPNILRMYN-YFHD---------------------------------------RKRIYL 91
Query: 472 QMEYCPRTLRQVFESYDH------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525
+E+ PR E Y FD++ + ++ + L + H + +IHRD+ P N+
Sbjct: 92 MLEFAPRG-----ELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLL 146
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585
+ ++KI DFG + + T GT Y PE+ +G
Sbjct: 147 MGYKGELKIADFGWSVHAPSLRRR------T-----------MCGTLDYLPPEMIEGKTH 189
Query: 586 IDEKADMYSLGIVFFELWH---PF--STAME--RQIVLSDLKQKGELPPSWVAKFSEQES 638
DEK D++ G++ +E PF + E R+IV DLK P +++ +
Sbjct: 190 -DEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKF-----PPFLS--DGSKD 241
Query: 639 LLRRLMSPSPSDRPSATELLQD 660
L+ +L+ P R +++
Sbjct: 242 LISKLLRYHPPQRLPLKGVMEH 263
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277 | Back alignment and structure |
|---|
Score = 153 bits (390), Expect = 9e-42
Identities = 72/311 (23%), Positives = 126/311 (40%), Gaps = 78/311 (25%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREVATLSRLQHQHVVRY 419
+G G +G V + K A KKI ++D DR +E+ + L H +++R
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDV-----DRFKQEIEIMKSLDHPNIIRL 71
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 479
Y+ FE +T +Y+ ME C T
Sbjct: 72 YET-FED---------------------------------------NTDIYLVMELC--T 89
Query: 480 LRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IK 533
++FE F + A + + ++ +A+ H + HRDL P N F + +K
Sbjct: 90 GGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLK 149
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
+ DFGLA K ++ + VGT +Y +P++ +G + D +
Sbjct: 150 LIDFGLAARFKPGKMMRTK----------------VGTPYYVSPQVLEG--LYGPECDEW 191
Query: 594 SLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPS 649
S G++ + L + PFS + +++L + P S Q ESL+RRL++ SP
Sbjct: 192 SAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPK 251
Query: 650 DRPSATELLQD 660
R ++ + L+
Sbjct: 252 QRITSLQALEH 262
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 4e-41
Identities = 79/331 (23%), Positives = 132/331 (39%), Gaps = 74/331 (22%)
Query: 344 PNMSLPSSRYLNDFEEL----QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 399
+ + + F E LG G FG V+ CK+++ + YAVK I
Sbjct: 7 HSSGRENLYFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTS 66
Query: 400 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 459
ILREV L +L H ++++ ++ E
Sbjct: 67 TILREVELLKKLDHPNIMKLFEI-LED--------------------------------- 92
Query: 460 QENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIH 516
S+ YI E T ++F+ F + A + +Q+ G+ ++H I+H
Sbjct: 93 ------SSSFYIVGELY--TGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVH 144
Query: 517 RDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573
RDL P NI +++ IKI DFGL+ + +D +GT +
Sbjct: 145 RDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR----------------IGTAY 188
Query: 574 YTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWV 630
Y APE+ +G DEK D++S G++ + L PF E I+ K
Sbjct: 189 YIAPEVLRG--TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
Query: 631 AKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
S+ + L+R++++ PS R +AT+ L+
Sbjct: 247 RTISDDAKDLIRKMLTFHPSLRITATQCLEH 277
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377 | Back alignment and structure |
|---|
Score = 155 bits (392), Expect = 4e-41
Identities = 48/383 (12%), Positives = 102/383 (26%), Gaps = 59/383 (15%)
Query: 299 FSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSP-NMSLPSSRYLNDF 357
F G + + ++ + + + M S+ S ++G P +
Sbjct: 16 FQGPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPRTL 75
Query: 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV 417
LG + ++ G + V ++ + ++E RL
Sbjct: 76 VRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKN 135
Query: 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 477
+ + FD + V E + +
Sbjct: 136 QKQAKVHLRFIFPFDLVKDPQKKKMI------------RVRLDERDMWVLSRFFLYPRMQ 183
Query: 478 RTLRQVFES-------YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
L+ E + L Q++ LA +H G++H L P +I D R
Sbjct: 184 SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG 243
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----------E 580
+ + F +D A + + PE+
Sbjct: 244 GVFLTGFEHLV--------RDGARVVS-----------SVSRGFEPPELEARRATISYHR 284
Query: 581 QGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE 637
+ D ++LG+V + +W P + + +P +
Sbjct: 285 DRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFRSCKNIPQP--VR----- 337
Query: 638 SLLRRLMSPSPSDRPSATELLQD 660
+LL + DR + ++
Sbjct: 338 ALLEGFLRYPKEDRLLPLQAMET 360
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312 | Back alignment and structure |
|---|
Score = 152 bits (387), Expect = 5e-41
Identities = 78/351 (22%), Positives = 123/351 (35%), Gaps = 84/351 (23%)
Query: 326 MVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAV 385
M++ + P P + ++ LG GGFG V D A+
Sbjct: 2 MLTKPLQGPPAPPGTPTPPPGGKDREAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAI 61
Query: 386 KKIR----LKDKSLPVNDRILREVATLSRL----QHQHVVRYYQAWFETGVADFDGDSMW 437
K I L L + EVA L ++ H V+R WFET
Sbjct: 62 KVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD-WFET----------- 109
Query: 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF---ESYDHFDKEL 494
+ +E P + +F +
Sbjct: 110 ----------------------------QEGFMLVLER-PLPAQDLFDYITEKGPLGEGP 140
Query: 495 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAA 553
+ F Q+V + H H +G++HRD+ NI D R K+ DFG L D
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLH------DEP 194
Query: 554 FPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAM 610
+ GT Y+ PE A ++SLGI+ +++ PF
Sbjct: 195 YTD-----------FDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFER-- 241
Query: 611 ERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
+++I+ + EL P+ V+ + +L+RR ++P PS RPS E+L D
Sbjct: 242 DQEIL------EAELHFPAHVSP--DCCALIRRCLAPKPSSRPSLEEILLD 284
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335 | Back alignment and structure |
|---|
Score = 153 bits (388), Expect = 5e-41
Identities = 84/390 (21%), Positives = 146/390 (37%), Gaps = 101/390 (25%)
Query: 336 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKD 392
+P ++ Y + + PLG G FG V +K + VK K ++ +
Sbjct: 5 EPPKAVELEGLAACEGEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLE 64
Query: 393 KSL---PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSN 449
P ++ E+A LSR++H ++++ FE
Sbjct: 65 DCWIEDPKLGKVTLEIAILSRVEHANIIKVLDI-FEN----------------------- 100
Query: 450 RAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH------FDKELAWHLFRQIV 503
+ + ME L + + D+ LA ++FRQ+V
Sbjct: 101 ----------------QGFFQLVMEKHGSGL----DLFAFIDRHPRLDEPLASYIFRQLV 140
Query: 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 563
+ ++ + IIHRD+ NI IK+ DFG A +L+ + F T
Sbjct: 141 SAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLE-----RGKLFYT------- 188
Query: 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK 620
GT Y APE+ G P + +M+SLG+ + L +PF +L+
Sbjct: 189 ----FCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF----------CELE 234
Query: 621 Q--KGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP--QMEYELLDNIL 675
+ + + PP V+ E SL+ L+ P P R + +L+ D P L D
Sbjct: 235 ETVEAAIHPPYLVS--KELMSLVSGLLQPVPERRTTLEKLVTD---PWVTQPVNLAD--- 286
Query: 676 RMMHSSEDTSIYDKVVSSIFDEETLDMKHH 705
++ E+ +K S + +L+M +
Sbjct: 287 ---YTWEEVFRVNKPESGVLSAASLEMGNR 313
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 1e-40
Identities = 70/331 (21%), Positives = 128/331 (38%), Gaps = 68/331 (20%)
Query: 340 DSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 399
+ + L ++ + LG G +G V ++ + A+K+I +D +
Sbjct: 7 EGDCESDLLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY--SQ 64
Query: 400 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 459
+ E+A L+H+++V+Y GS
Sbjct: 65 PLHEEIALHKHLKHKNIVQYL-----------------GS-------------------- 87
Query: 460 QENKLESTYLYIQMEYCPR-TLRQVFESYD---HFDKELAWHLFRQIVEGLAHIHGQGII 515
E+ ++ I ME P +L + S +++ +QI+EGL ++H I+
Sbjct: 88 ---FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIV 144
Query: 516 HRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574
HRD+ +N+ + + +KI DFG +K L + + GT Y
Sbjct: 145 HRDIKGDNVLINTYSGVLKISDFGTSKRLA----------GINPCTETF-----TGTLQY 189
Query: 575 TAPE-IEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWV 630
APE I++G + AD++SLG E+ PF E Q + + ++ P
Sbjct: 190 MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVG-MFKVHPEIP 248
Query: 631 AKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
S + ++ + + P P R A +LL D
Sbjct: 249 ESMSAEAKAFILKCFEPDPDKRACANDLLVD 279
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A Length = 304 | Back alignment and structure |
|---|
Score = 150 bits (381), Expect = 3e-40
Identities = 67/331 (20%), Positives = 131/331 (39%), Gaps = 86/331 (25%)
Query: 347 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 406
S+ ++ F ++ LG G F V L K +L G+ +A+K I K + + E+A
Sbjct: 1 SMQTTNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCI--KKSPAFRDSSLENEIA 58
Query: 407 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 466
L +++H+++V +E+ +
Sbjct: 59 VLKKIKHENIVTLED-IYES---------------------------------------T 78
Query: 467 TYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
T+ Y+ M+ + ++F+ + ++ A + +Q++ + ++H GI+HRDL P N
Sbjct: 79 THYYLVMQLV--SGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPEN 136
Query: 524 IFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580
+ + + I I DFGL+K + + + GT Y APE+
Sbjct: 137 LLYLTPEENSKIMITDFGLSKMEQNGIM-----------------STACGTPGYVAPEVL 179
Query: 581 QGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL---PPSW----- 629
P + D +S+G++ + L + PF E + L + ++G P W
Sbjct: 180 AQKP-YSKAVDCWSIGVITYILLCGYPPFYE--ETESKLFEKIKEGYYEFESPFWDDISE 236
Query: 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
AK + L+ P++R + + L
Sbjct: 237 SAK-----DFICHLLEKDPNERYTCEKALSH 262
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413 | Back alignment and structure |
|---|
Score = 152 bits (386), Expect = 5e-40
Identities = 55/387 (14%), Positives = 108/387 (27%), Gaps = 52/387 (13%)
Query: 301 ERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNM--SLPSSRYLNDFE 358
+ G + + ++ + + + M S+ S ++G P S R
Sbjct: 23 DPGDVVIEELFNRIPQANVRTTSEYMQSAADSLVSTSLWNTGQPFRVESELGERPR-TLV 81
Query: 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVV 417
LG + ++ G + V ++ ++ EV L L+
Sbjct: 82 RGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQ 141
Query: 418 RYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP 477
+ + D + V E + +
Sbjct: 142 KQAKVHLRFIFPF---DLVKDPQK----------KKMIRVRLDERDMWVLSRFFLYPRMQ 188
Query: 478 RTLRQVFE---SYDHFDKELAWH----LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
L+ E S+ K L H L Q++ LA +H G++H L P +I D R
Sbjct: 189 SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRG 248
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP----KI 586
+ + F A+ + G TA + +
Sbjct: 249 GVFLTGFEHLVRD-------GASAVSPIGRG-------FAPPETTAERMLPFGQHHPTLM 294
Query: 587 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL 643
D ++LG+ + +W P + + +P +LL
Sbjct: 295 TFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFRSCKNIPQPV-------RALLEGF 347
Query: 644 MSPSPSDRPSATELLQDALPPQMEYEL 670
+ DR + ++ Q+ EL
Sbjct: 348 LRYPKEDRLLPLQAMETPEYEQLRTEL 374
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320 | Back alignment and structure |
|---|
Score = 148 bits (376), Expect = 2e-39
Identities = 77/360 (21%), Positives = 126/360 (35%), Gaps = 81/360 (22%)
Query: 315 NKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPS-SRYLNDFEELQPLGHGGFGHVVL 373
+ + H + R S + + + ++ LG GGFG V
Sbjct: 2 GSSHHHHHHSSGLVPRGSHMAPCNDLHATKLAPGKEKEPLESQYQVGPLLGSGGFGSVYS 61
Query: 374 CKNKLDGRHYAVK---KIRLKDKS-LPVNDRILREVATLSRLQHQ--HVVRYYQAWFETG 427
D A+K K R+ D LP R+ EV L ++ V+R WFE
Sbjct: 62 GIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLD-WFER- 119
Query: 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF--- 484
+ +E P ++ +F
Sbjct: 120 --------------------------------------PDSFVLILER-PEPVQDLFDFI 140
Query: 485 ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFL 543
+ELA F Q++E + H H G++HRD+ NI D R ++K+ DFG L
Sbjct: 141 TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALL 200
Query: 544 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL- 602
K D + GT Y+ PE + A ++SLGI+ +++
Sbjct: 201 K------DTVYTD-----------FDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243
Query: 603 --WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
PF + +I+ + V+ SE + L+R ++ PSDRP+ E+
Sbjct: 244 CGDIPFEH--DEEIIRGQVF-----FRQRVS--SECQHLIRWCLALRPSDRPTFEEIQNH 294
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 6e-39
Identities = 73/321 (22%), Positives = 131/321 (40%), Gaps = 65/321 (20%)
Query: 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 405
M++P ++ D++ +Q LG G +G V L N++ AVK + +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEI 56
Query: 406 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
L H++VV++Y
Sbjct: 57 CINKMLNHENVVKFYGHR-RE--------------------------------------- 76
Query: 466 STYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 522
Y+ +EYC ++F+ + A F Q++ G+ ++HG GI HRD+ P
Sbjct: 77 GNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 523 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582
N+ D R+++KI DFGLA + +++ GT Y APE+ +
Sbjct: 135 NLLLDERDNLKISDFGLATVFR--YNNRERLLNK-----------MCGTLPYVAPELLKR 181
Query: 583 WPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639
E D++S GIV + P+ + SD K+K W S +L
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 640 LRRLMSPSPSDRPSATELLQD 660
L +++ +PS R + ++ +D
Sbjct: 242 LHKILVENPSARITIPDIKKD 262
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 8e-39
Identities = 58/350 (16%), Positives = 111/350 (31%), Gaps = 99/350 (28%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ + LG G +V ++K G +A+K L D +RE L +L H+
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFN-NISFLRPVDVQMREFEVLKKLNHK 67
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+ + E + + + ME
Sbjct: 68 NIVKLFAI-EEET-------------------------------------TTRHKVLIME 89
Query: 475 YCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---- 526
+CP T+ + + + + R +V G+ H+ GI+HR++ P NI
Sbjct: 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586
D ++ K+ DFG A+ L+ D F + GT Y P++ +
Sbjct: 150 DGQSVYKLTDFGAARE-----LEDDEQFVS-----------LYGTEEYLHPDMYERAVLR 193
Query: 587 -------DEKADMYSLGIVFFELWH---PFSTA---------MERQI------VLSDLKQ 621
D++S+G+ F+ PF M + I +S +++
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK 253
Query: 622 KGELPPSWVAKF-----------SEQESLLRRLMSPSPSDRPSATELLQD 660
P W +L ++ + +
Sbjct: 254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 1e-38
Identities = 68/324 (20%), Positives = 118/324 (36%), Gaps = 74/324 (22%)
Query: 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILREVAT 407
++ + + LG G +G V + AVK K +L+ + +E+
Sbjct: 1 AKLIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPN-GEANVKKEIQL 59
Query: 408 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 467
L RL+H++V++ DV E K
Sbjct: 60 LRRLRHKNVIQLV-----------------------------------DVLYNEEK---Q 81
Query: 468 YLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525
+Y+ MEYC ++++ +S F A F Q+++GL ++H QGI+H+D+ P N+
Sbjct: 82 KMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLL 141
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585
+KI G+A+ L D T G+ + PEI G
Sbjct: 142 LTTGGTLKISALGVAEA--LHPFAADDTCRT-----------SQGSPAFQPPEIANGLDT 188
Query: 586 ID-EKADMYSLGIVFFEL---WHPFS----TAMERQIVLSDLKQKGELP-PSWVAKFSEQ 636
K D++S G+ + + +PF + I KG P
Sbjct: 189 FSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENI------GKGSYAIPGDCG--PPL 240
Query: 637 ESLLRRLMSPSPSDRPSATELLQD 660
LL+ ++ P+ R S ++ Q
Sbjct: 241 SDLLKGMLEYEPAKRFSIRQIRQH 264
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328 | Back alignment and structure |
|---|
Score = 145 bits (368), Expect = 2e-38
Identities = 86/387 (22%), Positives = 151/387 (39%), Gaps = 98/387 (25%)
Query: 342 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 398
S ++ ++ L+ +G G F V L ++ L GR A+K K +L SL
Sbjct: 2 NSIASCADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSL--- 58
Query: 399 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 458
++ REV + L H ++V+ ++ ET
Sbjct: 59 QKLFREVRIMKILNHPNIVKLFEVI-ET-------------------------------- 85
Query: 459 GQENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGII 515
LY+ MEY +VF+ ++ ++ A FRQIV + + H + I+
Sbjct: 86 -------EKTLYLIMEYASG--GEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKRIV 136
Query: 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 575
HRDL N+ DA +IKI DFG + + D G Y
Sbjct: 137 HRDLKAENLLLDADMNIKIADFGFSNEFTVGGK-------LDA---------FCGAPPYA 180
Query: 576 APEIEQGWPKIDEKADMYSLGIVFFEL---WHPFS----TAMERQIVLSDLKQKGELP-P 627
APE+ QG + D++SLG++ + L PF + +++ +G+ P
Sbjct: 181 APELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVL------RGKYRIP 234
Query: 628 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD----------ALPPQMEYELL---DNI 674
+++ + E+LL+R + +P R + ++++D L P +E EL
Sbjct: 235 FYMST--DCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEEDELKPFVEPELDISDQKR 292
Query: 675 LRMMHS--SEDTSIYDKVVSSIFDEET 699
+ +M I + + +DE T
Sbjct: 293 IDIMVGMGYSQEEIQESLSKMKYDEIT 319
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298 | Back alignment and structure |
|---|
Score = 144 bits (365), Expect = 3e-38
Identities = 70/348 (20%), Positives = 120/348 (34%), Gaps = 102/348 (29%)
Query: 347 SLPSSRYLNDFEEL----QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------ 396
+LP S + F E + LG G V C +K + YAVK I +
Sbjct: 5 ALPGSHSTHGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQ 64
Query: 397 -VNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 454
+ + L+EV L ++ H ++++ +ET
Sbjct: 65 ELREATLKEVDILRKVSGHPNIIQLKDT-YET---------------------------- 95
Query: 455 ADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508
+T+ ++ + +V ++ + R ++E +
Sbjct: 96 -----------NTFFFLVFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICA 139
Query: 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568
+H I+HRDL P NI D +IK+ DFG + L + ++
Sbjct: 140 LHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREV---------------- 183
Query: 569 VGTYFYTAPEI-----EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK 620
GT Y APEI P ++ DM+S G++ + L PF +Q+++ +
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWH--RKQMLMLRMI 241
Query: 621 QKGEL---PPSW-----VAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
G P W K L+ R + P R +A E L
Sbjct: 242 MSGNYQFGSPEWDDYSDTVK-----DLVSRFLVVQPQKRYTAEEALAH 284
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 3e-38
Identities = 72/351 (20%), Positives = 136/351 (38%), Gaps = 82/351 (23%)
Query: 336 KPSVDSGSPNMSLPSSRYLNDFEEL---QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD 392
P+ ++ ++ + +L + +G G FG V + + G AVK + +D
Sbjct: 15 IPTTENLYFQGAMDGDDMDIPWCDLNIKEKIGAGSFGTV--HRAEWHGSDVAVKILMEQD 72
Query: 393 KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 452
+ LREVA + RL+H ++V + G
Sbjct: 73 FHAERVNEFLREVAIMKRLRHPNIVLFM------GA------------------------ 102
Query: 453 SSADVTGQENKLESTYLYIQMEYCPR-TLRQVF---ESYDHFDKELAWHLFRQIVEGLAH 508
VT N L I EY R +L ++ + + D+ + + +G+ +
Sbjct: 103 ----VTQPPN------LSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNY 152
Query: 509 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 566
+H + I+HR+L N+ D + +K+ DFGL++ +
Sbjct: 153 LHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKAST---------------FLSSK 197
Query: 567 GQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG 623
GT + APE+ + P +EK+D+YS G++ +EL P+ Q+V + +
Sbjct: 198 SAAGTPEWMAPEVLRDEP-SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCK 256
Query: 624 --ELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE-------LLQDALPPQ 665
E+P + + + ++ + P RPS L++ A+PP
Sbjct: 257 RLEIPRNLNPQVAA---IIEGCWTNEPWKRPSFATIMDLLRPLIKSAVPPP 304
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 3e-38
Identities = 79/363 (21%), Positives = 144/363 (39%), Gaps = 66/363 (18%)
Query: 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 405
M++P ++ D++ +Q LG G +G V L N++ AVK + +++ + I +E+
Sbjct: 1 MAVP---FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEI 56
Query: 406 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
L H++VV++Y
Sbjct: 57 CINKMLNHENVVKFYGHR-RE--------------------------------------- 76
Query: 466 STYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 522
Y+ +EYC ++F+ + A F Q++ G+ ++HG GI HRD+ P
Sbjct: 77 GNIQYLFLEYCSG--GELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPE 134
Query: 523 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582
N+ D R+++KI DFGLA + +++ GT Y APE+ +
Sbjct: 135 NLLLDERDNLKISDFGLATVFR--YNNRERLLNK-----------MCGTLPYVAPELLKR 181
Query: 583 WPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639
E D++S GIV + P+ + SD K+K W S +L
Sbjct: 182 REFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLAL 241
Query: 640 LRRLMSPSPSDRPSATELLQDA-LPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE 698
L +++ +PS R + ++ +D ++ + SE S + K + S D
Sbjct: 242 LHKILVENPSARITIPDIKKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFS 301
Query: 699 TLD 701
++
Sbjct: 302 PVN 304
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365 | Back alignment and structure |
|---|
Score = 146 bits (370), Expect = 3e-38
Identities = 69/390 (17%), Positives = 128/390 (32%), Gaps = 109/390 (27%)
Query: 307 ASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL----QP 362
S +K+ ++ S P LP +F +
Sbjct: 42 RSLRDDPSQSANLLAEAKKLNDAQPKGTENLYFQSMGPEDELPDWAAAKEFYQKYDPKDV 101
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLK------DKSLPVNDRILREVATLSRL-QHQH 415
+G G V C ++ G +AVK + + ++ V + RE L ++ H H
Sbjct: 102 IGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPH 161
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
++ + +E+ S+++++ +
Sbjct: 162 IITLIDS-YES---------------------------------------SSFMFLVFDL 181
Query: 476 CP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
+V ++ + R ++E ++ +H I+HRDL P NI D
Sbjct: 182 MRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDN 236
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI--- 586
I++ DFG + L+ + ++ GT Y APEI +
Sbjct: 237 MQIRLSDFGFSCHLEPGEKLREL----------------CGTPGYLAPEILKCSMDETHP 280
Query: 587 --DEKADMYSLGIVFFEL-------WHPFSTAMERQIVLSDLKQKGEL---PPSW----- 629
++ D+++ G++ F L WH M R I +G+ P W
Sbjct: 281 GYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMI------MEGQYQFSSPEWDDRSS 334
Query: 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
K L+ RL+ P R +A + LQ
Sbjct: 335 TVK-----DLISRLLQVDPEARLTAEQALQ 359
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 5e-38
Identities = 78/327 (23%), Positives = 125/327 (38%), Gaps = 83/327 (25%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-Q 412
D ++L +G G +G V +K G+ AVK+IR ++L ++ + R
Sbjct: 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRS-TVDEKEQKQLLMDLDVVMRSSD 79
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
++V++Y A F +GD +I
Sbjct: 80 CPYIVQFYGALFR------EGD----------------------------------CWIC 99
Query: 473 MEYC----PRTLRQVFESYDHFDKE--LAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIF 525
ME + + V+ D E L + V+ L H+ IIHRD+ P+NI
Sbjct: 100 MELMSTSFDKFYKYVYSVLDDVIPEEILG-KITLATVKALNHLKENLKIIHRDIKPSNIL 158
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWP 584
D +IK+ DFG++ QL S+ T G Y APE I+
Sbjct: 159 LDRSGNIKLCDFGISG-----QLVD-----------SIAKTRDAGCRPYMAPERIDPSAS 202
Query: 585 KI--DEKADMYSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGELPPSWVAKF 633
+ D ++D++SLGI +EL W+ + Q+V D Q L S +F
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLT-QVVKGDPPQ---LSNSEEREF 258
Query: 634 SEQ-ESLLRRLMSPSPSDRPSATELLQ 659
S + + ++ S RP ELL+
Sbjct: 259 SPSFINFVNLCLTKDESKRPKYKELLK 285
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676 | Back alignment and structure |
|---|
Score = 151 bits (383), Expect = 5e-38
Identities = 66/338 (19%), Positives = 111/338 (32%), Gaps = 70/338 (20%)
Query: 342 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 401
G ++ +E + LG GGFG+V+ ++ G A+K+ R ++ S +R
Sbjct: 1 GGGRSPSLPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCR-QELSPKNRERW 59
Query: 402 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 461
E+ + +L H +VV + + +
Sbjct: 60 CLEIQIMKKLNHPNVVSAREV-PDG---------------------------------LQ 85
Query: 462 NKLESTYLYIQMEYCPR-TLRQVFESYDH---FDKELAWHLFRQIVEGLAHIHGQGIIHR 517
+ + MEYC LR+ +++ + L I L ++H IIHR
Sbjct: 86 KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHR 145
Query: 518 DLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574
DL P NI KI D G AK LDQ VGT Y
Sbjct: 146 DLKPENIVLQPGPQRLIHKIIDLGYAKE-----LDQGELCTE-----------FVGTLQY 189
Query: 575 TAPEIEQGWPKIDEKADMYSLGIVFFEL------WHPFSTAMERQIVLSDLKQKGELPPS 628
APE+ + K D +S G + FE + P ++ +++K
Sbjct: 190 LAPELLEQ-KKYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGK---VREKSNEHIV 245
Query: 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666
++ + P+P+ + M
Sbjct: 246 V--YDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCM 281
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348 | Back alignment and structure |
|---|
Score = 144 bits (366), Expect = 7e-38
Identities = 55/357 (15%), Positives = 120/357 (33%), Gaps = 109/357 (30%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI---------------RLKDKSLP 396
+Y+ND+ ++ L G F ++LC+ + YA+KK K
Sbjct: 28 KYINDYRIIRTLNQGKFNKIILCEKD--NKFYALKKYEKSLLEKKRDFTKSNNDKISIKS 85
Query: 397 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 456
D E+ ++ +++++ +
Sbjct: 86 KYDDFKNELQIITDIKNEYCLTCEG-IITN------------------------------ 114
Query: 457 VTGQENKLESTYLYIQMEYCP---------RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507
+YI EY ++ + + ++ +
Sbjct: 115 ---------YDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFS 165
Query: 508 HIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGT 566
+IH + I HRD+ P+NI D +K+ DFG ++++ +++
Sbjct: 166 YIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKI-----------------K 208
Query: 567 GQVGTYFYTAPEIEQGWPKID-EKADMYSLGIVFFEL---WHPFST-----AMERQIVLS 617
G GTY + PE + K D++SLGI + + PFS + I
Sbjct: 209 GSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTK 268
Query: 618 DLK--------------QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
+++ +K ++++ +E L+ + +P++R ++ + L+
Sbjct: 269 NIEYPLDRNHFLYPLTNKKSTCSNNFLS--NEDIDFLKLFLRKNPAERITSEDALKH 323
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 1e-37
Identities = 68/331 (20%), Positives = 127/331 (38%), Gaps = 89/331 (26%)
Query: 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 409
S+++ ++++ + LG G F V C +K G +A K I K S ++ RE
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+LQH ++VR + + + ++
Sbjct: 61 KLQHPNIVRLHDS-IQE---------------------------------------ESFH 80
Query: 470 YIQMEYCPRTLRQVFESYD------HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
Y+ + E ++ + + A H +QI+E +A+ H GI+HR+L P N
Sbjct: 81 YLVFDLVTG-----GELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPEN 135
Query: 524 IFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580
+ ++ +K+ DFGLA + + GT Y +PE+
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGF----------------AGTPGYLSPEVL 179
Query: 581 QGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL---PPSW----- 629
+ P + D+++ G++ + L + PF E Q L + G P W
Sbjct: 180 KKDP-YSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGAYDYPSPEWDTVTP 236
Query: 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
AK SL+ +++ +P R +A + L+
Sbjct: 237 EAK-----SLIDSMLTVNPKKRITADQALKV 262
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396 | Back alignment and structure |
|---|
Score = 145 bits (367), Expect = 1e-37
Identities = 56/350 (16%), Positives = 110/350 (31%), Gaps = 99/350 (28%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ + LG G +V ++K G +A+K L D +RE L +L H+
Sbjct: 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFN-NISFLRPVDVQMREFEVLKKLNHK 67
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+ + E + + + ME
Sbjct: 68 NIVKLFAI-EEET-------------------------------------TTRHKVLIME 89
Query: 475 YCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---- 526
+CP T+ + + + + R +V G+ H+ GI+HR++ P NI
Sbjct: 90 FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586
D ++ K+ DFG A+ L+ D F + GT Y P++ +
Sbjct: 150 DGQSVYKLTDFGAARE-----LEDDEQFVS-----------LYGTEEYLHPDMYERAVLR 193
Query: 587 -------DEKADMYSLGIVFFEL------WHPFSTAMERQIVL--------SDLKQKGEL 625
D++S+G+ F+ + PF + V+ S +
Sbjct: 194 KDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQK 253
Query: 626 PPSWVAKFS---------------EQESLLRRLMSPSPSDRPSATELLQD 660
+ +S +L ++ + +
Sbjct: 254 AENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 2e-37
Identities = 71/318 (22%), Positives = 114/318 (35%), Gaps = 72/318 (22%)
Query: 356 DFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 412
++ +G G FG V K K G AVK + + + EV L + +
Sbjct: 22 PDGQITVGQRIGSGSFGTV--YKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR 78
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +++ + G T + L I
Sbjct: 79 HVNILLFM------GY----------------------------STAPQ-------LAIV 97
Query: 473 MEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
++C +L + + F+ + + RQ G+ ++H + IIHRDL NNIF N
Sbjct: 98 TQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDN 157
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDE 588
+KIGDFGLA G+ + APE+ Q
Sbjct: 158 TVKIGDFGLATEKSRWSGSHQF-------------EQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM- 644
++D+Y+ GIV +EL P+S R ++ + +G L P S ++RLM
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV-GRGSLSPDLSKVRSNCPKRMKRLMA 263
Query: 645 ---SPSPSDRPSATELLQ 659
+RPS +L
Sbjct: 264 ECLKKKRDERPSFPRILA 281
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 2e-37
Identities = 86/371 (23%), Positives = 140/371 (37%), Gaps = 91/371 (24%)
Query: 310 PSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRY--LNDFEEL-QPLGHG 366
SS + ++ Q M S S P S P+ + S L+DF E+ LG G
Sbjct: 7 HSSGVDLGTENLYFQSMSSVTASA--APGTASLVPDYWIDGSNRDALSDFFEVESELGRG 64
Query: 367 GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 426
V CK K + YA+K ++ + E+ L RL H ++++ + FET
Sbjct: 65 ATSIVYRCKQKGTQKPYALKVLKKTVD----KKIVRTEIGVLLRLSHPNIIKLKE-IFET 119
Query: 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE- 485
T + + +E T ++F+
Sbjct: 120 ---------------------------------------PTEISLVLELV--TGGELFDR 138
Query: 486 --SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLA 540
++ + A +QI+E +A++H GI+HRDL P N+ + +KI DFGL+
Sbjct: 139 IVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLS 198
Query: 541 KFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600
K ++ + L + GT Y APEI +G + DM+S+GI+ +
Sbjct: 199 KIVEHQVLMKTV----------------CGTPGYCAPEILRGCA-YGPEVDMWSVGIITY 241
Query: 601 EL---WHPFSTAMERQIVLSDLKQKGEL---PPSW-----VAKFSEQESLLRRLMSPSPS 649
L + PF + E P W AK L+R+L+ P
Sbjct: 242 ILLCGFEPFY-DERGDQFMFRRILNCEYYFISPWWDEVSLNAK-----DLVRKLIVLDPK 295
Query: 650 DRPSATELLQD 660
R + + LQ
Sbjct: 296 KRLTTFQALQH 306
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444 | Back alignment and structure |
|---|
Score = 145 bits (369), Expect = 2e-37
Identities = 72/331 (21%), Positives = 131/331 (39%), Gaps = 82/331 (24%)
Query: 347 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 406
++ +R+ +++ + LG G F V C L G+ YA I K S + ++ RE
Sbjct: 3 TITCTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREAR 62
Query: 407 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 466
L+H ++VR +
Sbjct: 63 ICRLLKHPNIVRLHD-SISE---------------------------------------E 82
Query: 467 TYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
+ Y+ + T ++FE + +++ + A H +QI+E + H H G++HR+L P N
Sbjct: 83 GHHYLIFDLV--TGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPEN 140
Query: 524 IFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580
+ ++ +K+ DFGLA ++ EQ G GT Y +PE+
Sbjct: 141 LLLASKLKGAAVKLADFGLAIEVEGEQ---------------QAWFGFAGTPGYLSPEVL 185
Query: 581 QGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL---PPSW----- 629
+ P + D+++ G++ + L + PF E Q L + G P W
Sbjct: 186 RKDP-YGKPVDLWACGVILYILLVGYPPFWD--EDQHRLYQQIKAGAYDFPSPEWDTVTP 242
Query: 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
AK L+ ++++ +PS R +A E L+
Sbjct: 243 EAK-----DLINKMLTINPSKRITAAEALKH 268
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 141 bits (358), Expect = 2e-37
Identities = 70/355 (19%), Positives = 125/355 (35%), Gaps = 98/355 (27%)
Query: 342 GSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN 398
GS S + LN + +G G +G V L N+ D +YA+K K +L ++
Sbjct: 1 GSSGSSGDCVQ-LNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPR 59
Query: 399 ---------------------DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437
+++ +E+A L +L H +VV+ +
Sbjct: 60 RPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPNVVKLVEVL-------------- 105
Query: 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELA 495
+ +LY+ E + V E ++ A
Sbjct: 106 ------------------------DDPNEDHLYMVFELVNQ--GPVMEVPTLKPLSEDQA 139
Query: 496 WHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFP 555
F+ +++G+ ++H Q IIHRD+ P+N+ IKI DFG++ K DA
Sbjct: 140 RFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK----GSDALLS 195
Query: 556 TDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI--DEKADMYSLGIVFFELWH---PFS--- 607
VGT + APE KI + D++++G+ + PF
Sbjct: 196 N-----------TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER 244
Query: 608 -TAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
+ +I + L P + + L+ R++ +P R E+
Sbjct: 245 IMCLHSKI------KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLH 293
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 3e-37
Identities = 61/309 (19%), Positives = 108/309 (34%), Gaps = 76/309 (24%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
LG G FG V C + Y K +++K + +E++ L+ +H++++ +++
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIARHRNILHLHES 69
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP----- 477
FE+ L + E+
Sbjct: 70 -FES---------------------------------------MEELVMIFEFISGLDIF 89
Query: 478 -RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND--IKI 534
R + S ++ Q+ E L +H I H D+ P NI + R IKI
Sbjct: 90 ER----INTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKI 145
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594
+FG A+ LK + Y APE+ Q + DM+S
Sbjct: 146 IEFGQARQLKPGDNFRLL----------------FTAPEYYAPEVHQHDV-VSTATDMWS 188
Query: 595 LGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSD 650
LG + + L +PF +QI+ + + + + S + + RL+
Sbjct: 189 LGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKS 248
Query: 651 RPSATELLQ 659
R +A+E LQ
Sbjct: 249 RMTASEALQ 257
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351 | Back alignment and structure |
|---|
Score = 142 bits (360), Expect = 5e-37
Identities = 74/351 (21%), Positives = 132/351 (37%), Gaps = 96/351 (27%)
Query: 342 GSPNMSLPSSRYLN------DFEEL----QPLGHGGFGHVVLCKNKLDGRHYAVKKI--- 388
GSP +S L+ FE++ + +G G F V C N+ G+ +AVK +
Sbjct: 1 GSPGISGGGGGILDMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVA 60
Query: 389 RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 448
+ + + RE + L+H H+V + + +
Sbjct: 61 KFTSSPGLSTEDLKREASICHMLKHPHIVELLET-YSS---------------------- 97
Query: 449 NRAASSADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQI 502
LY+ E+ +++ + + + A H RQI
Sbjct: 98 -----------------DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV-ASHYMRQI 139
Query: 503 VEGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTG 559
+E L + H IIHRD+ P+ + ++ + +K+G FG+A L +
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG----ESGLVA----- 190
Query: 560 GVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPF---STAMERQ 613
G+VGT + APE+ + P + D++ G++ F L PF +
Sbjct: 191 ------GGRVGTPHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLFEG 243
Query: 614 IVLSDLKQKGEL---PPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
I KG+ P W + SE + L+RR++ P++R + E L
Sbjct: 244 I------IKGKYKMNPRQW-SHISESAKDLVRRMLMLDPAERITVYEALNH 287
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 6e-37
Identities = 72/333 (21%), Positives = 118/333 (35%), Gaps = 90/333 (27%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRY 419
LG G V C N + + YAVK I + + + R+ REV L + Q H++V+
Sbjct: 19 DVLGEGAHARVQTCINLITSQEYAVKII--EKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-- 477
+ FE E Y+ E
Sbjct: 77 IEF-FE---------------------------------------EEDRFYLVFEKMRGG 96
Query: 478 ----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 531
++ HF++ A + + + L +H +GI HRDL P NI + N
Sbjct: 97 SILSHIHKRR-----HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVS 151
Query: 532 -IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKI 586
+KI DF L +KL + P + G+ Y APE+ +
Sbjct: 152 PVKICDFDLGSGIKLNGDCSPISTP--------ELLTPCGSAEYMAPEVVEAFSEEASIY 203
Query: 587 DEKADMYSLGIVFF----------------ELWHPFSTAMERQIVLSDLKQKGEL---PP 627
D++ D++SLG++ + W Q +L + Q+G+
Sbjct: 204 DKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDK 263
Query: 628 SWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ 659
W A S + L+ +L+ R SA ++LQ
Sbjct: 264 DW-AHISCAAKDLISKLLVRDAKQRLSAAQVLQ 295
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419 | Back alignment and structure |
|---|
Score = 143 bits (363), Expect = 7e-37
Identities = 66/345 (19%), Positives = 117/345 (33%), Gaps = 102/345 (29%)
Query: 349 PSSRYLNDFEEL----QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK------DKSLPVN 398
S Y + + LG G G V L + + A++ I + +
Sbjct: 125 DQSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPA 184
Query: 399 DRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVT 458
+ E+ L +L H +++ +
Sbjct: 185 LNVETEIEILKKLNHPCIIKIKNFF----------------------------------- 209
Query: 459 GQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512
++ YI +E + + + F Q++ + ++H
Sbjct: 210 ------DAEDYYIVLELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHEN 258
Query: 513 GIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569
GIIHRDL P N+ ++ + IKI DFG +K L + +
Sbjct: 259 GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG------ETSLMRTL----------C 302
Query: 570 GTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFS-----TAMERQIVLSDL 619
GT Y APE+ G + D +SLG++ F + PFS +++ QI
Sbjct: 303 GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI----- 357
Query: 620 KQKGEL---PPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
G+ P W A+ SE+ L+++L+ P R + E L+
Sbjct: 358 -TSGKYNFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALRH 400
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573 | Back alignment and structure |
|---|
Score = 146 bits (371), Expect = 7e-37
Identities = 72/364 (19%), Positives = 136/364 (37%), Gaps = 74/364 (20%)
Query: 309 KPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL-QPLGHGG 367
+ ++ V + VSS + P ++ D ++ + LG G
Sbjct: 110 RRGYDVDEQGKIVRGKGTVSSNYDNYVFDIWKQYYPQPVEIKHDHVLDHYDIHEELGTGA 169
Query: 368 FGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWF 424
FG V + G ++A K + DK + + +E+ T+S L+H +V + A F
Sbjct: 170 FGVVHRVTERATGNNFAAKFVMTPHESDK-----ETVRKEIQTMSVLRHPTLVNLHDA-F 223
Query: 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--RTLRQ 482
E + + E+ +
Sbjct: 224 ED---------------------------------------DNEMVMIYEFMSGGELFEK 244
Query: 483 VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLA 540
V + ++ ++ A RQ+ +GL H+H +H DL P NI F + N++K+ DFGL
Sbjct: 245 VADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLT 304
Query: 541 KFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600
L +Q + GT + APE+ +G P + DM+S+G++ +
Sbjct: 305 AHLDPKQSVKVT----------------TGTAEFAAPEVAEGKP-VGYYTDMWSVGVLSY 347
Query: 601 EL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATE 656
L PF + + + + + S + SE + +R+L+ P+ R + +
Sbjct: 348 ILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQ 407
Query: 657 LLQD 660
L+
Sbjct: 408 ALEH 411
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 1e-36
Identities = 74/340 (21%), Positives = 128/340 (37%), Gaps = 76/340 (22%)
Query: 337 PSVDSGSPNMSLPSSRYLNDFEEL--QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS 394
VD G+ N+ S N+F L + LG G F V C +K G+ YA K ++ + +
Sbjct: 9 SGVDLGTENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRG 68
Query: 395 LPVNDRILREVATLSRLQHQ-HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAAS 453
IL E+A L + V+ ++ +E
Sbjct: 69 QDCRAEILHEIAVLELAKSCPRVINLHEV-YEN--------------------------- 100
Query: 454 SADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507
++ + + +EY L ++ E D L +QI+EG+
Sbjct: 101 ------------TSEIILILEYAAGGEIFSLCLPELAEMVSEND---VIRLIKQILEGVY 145
Query: 508 HIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564
++H I+H DL P NI + IKI DFG+++ + ++
Sbjct: 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREI------------ 193
Query: 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQ 621
+GT Y APEI P I DM+++GI+ + L PF ++ L+ +
Sbjct: 194 ----MGTPEYLAPEILNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQV 248
Query: 622 KGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
+ + S+ ++ L+ +P RP+A L
Sbjct: 249 NVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 1e-36
Identities = 75/354 (21%), Positives = 130/354 (36%), Gaps = 97/354 (27%)
Query: 351 SRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 407
S ++ D++E++ +G G FG V CK K + A+K+I + + E+
Sbjct: 1 SLHMIDYKEIEVEEVVGRGAFGVV--CKAKWRAKDVAIKQIESES----ERKAFIVELRQ 54
Query: 408 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 467
LSR+ H ++V+ Y A
Sbjct: 55 LSRVNHPNIVKLYGACLNP----------------------------------------- 73
Query: 468 YLYIQMEYCPR-TLRQVF---ESYDHFDKELAWHLFRQIVEGLAHIHG---QGIIHRDLT 520
+ + MEY +L V E ++ A Q +G+A++H + +IHRDL
Sbjct: 74 -VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLK 132
Query: 521 PNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579
P N+ A +KI DFG A ++ T G+ + APE+
Sbjct: 133 PPNLLLVAGGTVLKICDFGTACDIQTHM------------------TNNKGSAAWMAPEV 174
Query: 580 EQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG---ELPPSWVAKF 633
+G EK D++S GI+ +E+ PF + G L +
Sbjct: 175 FEGSN-YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPI 233
Query: 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIY 687
L+ R S PS RPS E+++ ++ +++R +++ Y
Sbjct: 234 ES---LMTRCWSKDPSQRPSMEEIVK----------IMTHLMRYFPGADEPLQY 274
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362 | Back alignment and structure |
|---|
Score = 140 bits (356), Expect = 2e-36
Identities = 73/344 (21%), Positives = 134/344 (38%), Gaps = 89/344 (25%)
Query: 337 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 396
+ GS M S+++ ++++ + LG G F V C +K G +A K I K S
Sbjct: 11 QQMGRGSEFMMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR 70
Query: 397 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 456
++ RE +LQH ++VR + + +
Sbjct: 71 DFQKLEREARICRKLQHPNIVRLHDS-IQE------------------------------ 99
Query: 457 VTGQENKLESTYLYIQMEYCPRTLRQVFESYD------HFDKELAWHLFRQIVEGLAHIH 510
++ Y+ + E ++ + + A H +QI+E +A+ H
Sbjct: 100 ---------ESFHYLVFDLVTG-----GELFEDIVAREFYSEADASHCIQQILESIAYCH 145
Query: 511 GQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 567
GI+HR+L P N+ ++ +K+ DFGLA + + A+ G
Sbjct: 146 SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE-----AW-----------HG 189
Query: 568 QVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGE 624
GT Y +PE+ + P + D+++ G++ + L + PF E Q L + G
Sbjct: 190 FAGTPGYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWD--EDQHRLYAQIKAGA 246
Query: 625 L---PPSW-----VAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
P W AK SL+ +++ +P R +A + L+
Sbjct: 247 YDYPSPEWDTVTPEAK-----SLIDSMLTVNPKKRITADQALKV 285
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 2e-36
Identities = 69/339 (20%), Positives = 119/339 (35%), Gaps = 88/339 (25%)
Query: 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK------DKSLPVND 399
MS+ +++ + LG G G V L + + A+K I + +
Sbjct: 1 MSVYPKALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPAL 60
Query: 400 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 459
+ E+ L +L H +++ +
Sbjct: 61 NVETEIEILKKLNHPCIIKIKNFF------------------------------------ 84
Query: 460 QENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513
++ YI +E + + + F Q++ + ++H G
Sbjct: 85 -----DAEDYYIVLELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENG 134
Query: 514 IIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570
IIHRDL P N+ ++ + IKI DFG +K L L + G
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTL----------------CG 178
Query: 571 TYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGEL 625
T Y APE+ G + D +SLG++ F + PFS Q+ L D G+
Sbjct: 179 TPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFS-EHRTQVSLKDQITSGKY 237
Query: 626 ---PPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
P W A+ SE+ L+++L+ P R + E L+
Sbjct: 238 NFIPEVW-AEVSEKALDLVKKLLVVDPKARFTTEEALRH 275
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373 | Back alignment and structure |
|---|
Score = 140 bits (355), Expect = 3e-36
Identities = 71/320 (22%), Positives = 122/320 (38%), Gaps = 81/320 (25%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREVATLSRLQ 412
+ + LG G FG V C+ G A K I +KDK + + E++ +++L
Sbjct: 90 TVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDK-----EEVKNEISVMNQLD 144
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H ++++ Y A FE+ + +
Sbjct: 145 HANLIQLYDA-FES---------------------------------------KNDIVLV 164
Query: 473 MEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
MEY R + + + + + +QI EG+ H+H I+H DL P NI
Sbjct: 165 MEYVDGGELFDRIIDESY----NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILC 220
Query: 527 DAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584
R IKI DFGLA+ K + + GT + APE+
Sbjct: 221 VNRDAKQIKIIDFGLARRYKPREKLKVN----------------FGTPEFLAPEVVNYDF 264
Query: 585 KIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLL 640
+ DM+S+G++ + L PF + + + + L + +L SE+ + +
Sbjct: 265 -VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFI 323
Query: 641 RRLMSPSPSDRPSATELLQD 660
+L+ S R SA+E L+
Sbjct: 324 SKLLIKEKSWRISASEALKH 343
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 3e-36
Identities = 79/320 (24%), Positives = 126/320 (39%), Gaps = 68/320 (21%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREVATL 408
RY E + LG GG V L ++ D R AVK +R +D S R RE
Sbjct: 13 RY----ELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSF--YLRFRREAQNA 66
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
+ L H +V Y D G+
Sbjct: 67 AALNHPAIVAVY-----------------------------------DT-GEAETPAGPL 90
Query: 469 LYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
YI MEY TLR + + + A + + L H GIIHRD+ P NI
Sbjct: 91 PYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS 150
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
A N +K+ DFG+A+ + T T V +GT Y +PE +G +D
Sbjct: 151 ATNAVKVMDFGIARA-----IADSGNSVTQTAAV-------IGTAQYLSPEQARGDS-VD 197
Query: 588 EKADMYSLGIVFFELW---HPFS--TAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLR 641
++D+YSLG V +E+ PF+ + + + +++ P + S ++++
Sbjct: 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPV--SVAYQHVREDPIPPSARHEGLSADLDAVVL 255
Query: 642 RLMSPSPSDRP-SATELLQD 660
+ ++ +P +R +A E+ D
Sbjct: 256 KALAKNPENRYQTAAEMRAD 275
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336 | Back alignment and structure |
|---|
Score = 139 bits (352), Expect = 4e-36
Identities = 64/321 (19%), Positives = 115/321 (35%), Gaps = 88/321 (27%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRY 419
Q LG G G V+ C ++ G+ A+K + S + +EV + H+V
Sbjct: 35 QVLGLGVNGKVLECFHRRTGQKCALKLL---YDS----PKARQEVDHHWQASGGPHIVCI 87
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-- 477
+E L I ME
Sbjct: 88 LDV-YENMHH-----------------------------------GKRCLLIIMECMEGG 111
Query: 478 ----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 531
R + +++ + A + R I + +H I HRD+ P N+ + ++
Sbjct: 112 ELFSRIQERGDQAFTERE---AAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA 168
Query: 532 -IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDE 588
+K+ DFG AK L T +Y APE+ + + D+
Sbjct: 169 VLKLTDFGFAKETTQNAL-----------------QTPCYTPYYVAPEVLGPEKY---DK 208
Query: 589 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQ--KGEL---PPSWVAKFSEQ-ESL 639
DM+SLG++ + L + PF + + I ++ G+ P W ++ SE + L
Sbjct: 209 SCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEW-SEVSEDAKQL 267
Query: 640 LRRLMSPSPSDRPSATELLQD 660
+R L+ P++R + T+ +
Sbjct: 268 IRLLLKTDPTERLTITQFMNH 288
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 138 bits (351), Expect = 4e-36
Identities = 74/313 (23%), Positives = 120/313 (38%), Gaps = 74/313 (23%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVN-DRILREVATLSRLQHQHVVR 418
LG G F V C+ K G YA K I R K V+ + I REV+ L +QH +V+
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
++ +E T + + +E
Sbjct: 79 LHEV-YEN---------------------------------------KTDVILILELV-- 96
Query: 479 TLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----D 531
++F+ + +E A +QI+ G+ ++H I H DL P NI RN
Sbjct: 97 AGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPR 156
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
IKI DFGLA + ++ GT + APEI P + +AD
Sbjct: 157 IKIIDFGLAHKIDFGNEFKNI----------------FGTPEFVAPEIVNYEP-LGLEAD 199
Query: 592 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPS 647
M+S+G++ + L PF +++ + + E + + S + +RRL+
Sbjct: 200 MWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKD 259
Query: 648 PSDRPSATELLQD 660
P R + + LQ
Sbjct: 260 PKKRMTIQDSLQH 272
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361 | Back alignment and structure |
|---|
Score = 139 bits (353), Expect = 4e-36
Identities = 76/404 (18%), Positives = 149/404 (36%), Gaps = 79/404 (19%)
Query: 341 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR 400
+ + +P + ++ ++ +G G FG L ++KL AVK I ++ +++
Sbjct: 6 VTTGPLDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYI---ERGAAIDEN 62
Query: 401 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 460
+ RE+ L+H ++VR+ + T
Sbjct: 63 VQREIINHRSLRHPNIVRFKEVI-LT---------------------------------- 87
Query: 461 ENKLESTYLYIQMEYCPRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517
T+L I MEY +++E + F ++ A F+Q++ G+++ H I HR
Sbjct: 88 -----PTHLAIIMEYASG--GELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHR 140
Query: 518 DLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 575
DL N D +KI DFG +K + + VGT Y
Sbjct: 141 DLKLENTLLDGSPAPRLKICDFGYSKSSV-----LHSQPKS-----------TVGTPAYI 184
Query: 576 APEIEQGWPKIDEKADMYSLGIVFFEL---WHPF----STAMERQIVLSDLKQKGELPPS 628
APE+ + AD++S G+ + + +PF R+ + L K +P
Sbjct: 185 APEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDD 244
Query: 629 -WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIY 687
++ E L+ R+ P+ R S E+ L +++ ++
Sbjct: 245 IRIS--PECCHLISRIFVADPATRISIPEIKTH---SWFLKNLPADLMNESNTGSQFQEP 299
Query: 688 DKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDY 731
++ + S+ + + +R + DLD ++ D+
Sbjct: 300 EQPMQSLDTIMQIISEATIPAVRNRCLDDFMTDNLDLDDDMDDF 343
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 4e-36
Identities = 67/315 (21%), Positives = 120/315 (38%), Gaps = 80/315 (25%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVN-DRILREVATLSRLQHQHVVR 418
LG G F V C+ K G+ YA K I RL V+ + I REV L ++H +++
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 477
+ FE T + + +E
Sbjct: 73 LHDI-FEN---------------------------------------KTDVVLILELVSG 92
Query: 478 -----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-- 530
+ + ++ A +QI++G+ ++H + I H DL P NI +N
Sbjct: 93 GELFDFLAEK-----ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVP 147
Query: 531 --DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
IK+ DFG+A ++ ++ GT + APEI P +
Sbjct: 148 NPRIKLIDFGIAHKIEAGNEFKNI----------------FGTPEFVAPEIVNYEP-LGL 190
Query: 589 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLM 644
+ADM+S+G++ + L PF +++ + + + + + SE + +RRL+
Sbjct: 191 EADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLL 250
Query: 645 SPSPSDRPSATELLQ 659
P R + + L+
Sbjct: 251 VKDPKRRMTIAQSLE 265
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290 | Back alignment and structure |
|---|
Score = 137 bits (348), Expect = 4e-36
Identities = 73/324 (22%), Positives = 125/324 (38%), Gaps = 81/324 (25%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA-TLSRLQ 412
+D E + LG G +G V ++ G+ AVK+IR + R+L ++ ++ +
Sbjct: 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRA-TVNSQEQKRLLMDLDISMRTVD 64
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
V +Y A F +GD ++I
Sbjct: 65 CPFTVTFYGALFR------EGD----------------------------------VWIC 84
Query: 473 MEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIFFD 527
ME + +QV + +++ + IV+ L H+H + +IHRD+ P+N+ +
Sbjct: 85 MELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLIN 144
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI- 586
A +K+ DFG++ L D A D G Y APE
Sbjct: 145 ALGQVKMCDFGISG-----YLVDDVAKDID-----------AGCKPYMAPERINPELNQK 188
Query: 587 --DEKADMYSLGIVFFEL------WHPFSTAME--RQIVLSDLKQKGELPPSWVAKFSEQ 636
K+D++SLGI EL + + T + +Q+V Q LP KFS +
Sbjct: 189 GYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQ---LPAD---KFSAE 242
Query: 637 -ESLLRRLMSPSPSDRPSATELLQ 659
+ + + +RP+ EL+Q
Sbjct: 243 FVDFTSQCLKKNSKERPTYPELMQ 266
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383 | Back alignment and structure |
|---|
Score = 140 bits (354), Expect = 5e-36
Identities = 60/251 (23%), Positives = 107/251 (42%), Gaps = 29/251 (11%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ + LG G FG V + G+ +A+KK+ + RE+ + L H ++
Sbjct: 9 YSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR------YKNRELDIMKVLDHVNI 62
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
++ ++ TG D + N ++ + N ++ YL + MEY
Sbjct: 63 IKLVDYFYTTG--DEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYV 120
Query: 477 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
P TL +V +S+ + + +L Q+ + IH GI HRD+ P N+ +++++
Sbjct: 121 PDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNT 180
Query: 533 -KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
K+ DFG AK L + + + FY APE+ G + D
Sbjct: 181 LKLCDFGSAKKLIPSE----------------PSVAYICSRFYRAPELMLGATEYTPSID 224
Query: 592 MYSLGIVFFEL 602
++S+G VF EL
Sbjct: 225 LWSIGCVFGEL 235
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318 | Back alignment and structure |
|---|
Score = 138 bits (350), Expect = 5e-36
Identities = 64/323 (19%), Positives = 115/323 (35%), Gaps = 80/323 (24%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-Q 412
+ND E L +G G G V + + G AVK++R + N RIL ++ + +
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRR-SGNKEENKRILMDLDVVLKSHD 82
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
++V+ + + + D ++I
Sbjct: 83 CPYIVQCFGTFIT------NTD----------------------------------VFIA 102
Query: 473 MEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARN 530
ME ++ + + + + IV+ L ++ + G+IHRD+ P+NI D R
Sbjct: 103 MELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERG 162
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI---- 586
IK+ DFG++ +L G Y APE
Sbjct: 163 QIKLCDFGISG-----RLVD-----------DKAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 587 DEKADMYSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ- 636
D +AD++SLGI EL + +++ + LP FS
Sbjct: 207 DIRADVWSLGISLVELATGQFPYKNCKTDFEVLT-KVLQEEPPL---LPGH--MGFSGDF 260
Query: 637 ESLLRRLMSPSPSDRPSATELLQ 659
+S ++ ++ RP +LL+
Sbjct: 261 QSFVKDCLTKDHRKRPKYNKLLE 283
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321 | Back alignment and structure |
|---|
Score = 138 bits (349), Expect = 8e-36
Identities = 66/316 (20%), Positives = 120/316 (37%), Gaps = 80/316 (25%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVN-DRILREVATLSRLQHQHVVR 418
LG G F V C+ K G YA K K + + V+ + I REV+ L ++ H +V+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP- 477
+ +E T + + +E
Sbjct: 80 LHDV-YEN---------------------------------------RTDVVLILELVSG 99
Query: 478 -----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-- 530
++ + +E A +QI++G+ ++H + I H DL P NI +N
Sbjct: 100 GELFDFLAQK-----ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIP 154
Query: 531 --DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
IK+ DFGLA ++ ++ GT + APEI P +
Sbjct: 155 IPHIKLIDFGLAHEIEDGVEFKNI----------------FGTPEFVAPEIVNYEP-LGL 197
Query: 589 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLM 644
+ADM+S+G++ + L PF +++ + + + + + SE + +R+L+
Sbjct: 198 EADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLL 257
Query: 645 SPSPSDRPSATELLQD 660
R + E L+
Sbjct: 258 VKETRKRLTIQEALRH 273
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387 | Back alignment and structure |
|---|
Score = 139 bits (351), Expect = 2e-35
Identities = 69/369 (18%), Positives = 133/369 (36%), Gaps = 82/369 (22%)
Query: 307 ASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL-QPLGH 365
+ +K + + + +F++ P + D+ ++ + LG
Sbjct: 4 SHHHHHHGSKVRGK--YDGPKINDYDKFYEDIWKKYVPQPVEVKQGSVYDYYDILEELGS 61
Query: 366 GGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
G FG V C K GR + K I DK + E++ +++L H ++ + A
Sbjct: 62 GAFGVVHRCVEKATGRVFVAKFINTPYPLDK-----YTVKNEISIMNQLHHPKLINLHDA 116
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT--- 479
FE + + +E+ +
Sbjct: 117 -FED---------------------------------------KYEMVLILEFL--SGGE 134
Query: 480 L--RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR--NDIKIG 535
L R E Y + E + RQ EGL H+H I+H D+ P NI + + + +KI
Sbjct: 135 LFDRIAAEDYKMSEAE-VINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKII 193
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFGLA L +++ + T + APEI P + DM+++
Sbjct: 194 DFGLATKLNPDEIVKVT----------------TATAEFAAPEIVDREP-VGFYTDMWAI 236
Query: 596 GIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 651
G++ + L PF+ + + + + + E + S + + ++ L+ P R
Sbjct: 237 GVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKR 296
Query: 652 PSATELLQD 660
+ + L+
Sbjct: 297 LTVHDALEH 305
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 4e-35
Identities = 68/324 (20%), Positives = 125/324 (38%), Gaps = 93/324 (28%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRY 419
+PLG G F C +K + +AVK I + + +E+ L + H ++V+
Sbjct: 17 KPLGEGSFSICRKCVHKKSNQAFAVKIISKRME-----ANTQKEITALKLCEGHPNIVKL 71
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-- 477
++ F + ++ ME
Sbjct: 72 HEV-FHD---------------------------------------QLHTFLVMELLNGG 91
Query: 478 ----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 531
R ++ HF + A ++ R++V ++H+H G++HRDL P N+ F ND
Sbjct: 92 ELFERIKKKK-----HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNL 146
Query: 532 -IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDE 588
IKI DFG A+ + T T Y APE+ + G+ DE
Sbjct: 147 EIKIIDFGFARLKP----PDNQPLKT-----------PCFTLHYAAPELLNQNGY---DE 188
Query: 589 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLK-----QKGEL---PPSWVAKFSEQ- 636
D++SLG++ + + PF + S ++ +KG+ +W S++
Sbjct: 189 SCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAW-KNVSQEA 247
Query: 637 ESLLRRLMSPSPSDRPSATELLQD 660
+ L++ L++ P+ R + L +
Sbjct: 248 KDLIQGLLTVDPNKRLKMSGLRYN 271
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 5e-35
Identities = 70/385 (18%), Positives = 134/385 (34%), Gaps = 95/385 (24%)
Query: 328 SSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYA 384
+S S + S+ + FE+L+ +G G FG V + G A
Sbjct: 3 EMNLSLLSARSFPRKASQTSIFLQEWDIPFEQLEIGELIGKGRFGQV--YHGRWHG-EVA 59
Query: 385 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 444
++ I ++ + REV + +H++VV + G
Sbjct: 60 IRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFM------GA---------------- 97
Query: 445 STFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVF-ESYDHFDKELAWHLFRQI 502
+ L I C TL V ++ D + ++I
Sbjct: 98 ------------CMSPPH------LAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEI 139
Query: 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 562
V+G+ ++H +GI+H+DL N+F+D + I DFGL + Q +
Sbjct: 140 VKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR----------E 188
Query: 563 VDGTGQVGTYFYTAPEIEQGWPKI--------DEKADMYSLGIVFFELWH---PFSTAME 611
Q G + APEI + + +D+++LG +++EL PF T
Sbjct: 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPA 248
Query: 612 RQI---VLSDLKQKGELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPP 664
I + + +K L + K + ++ + +RP+ T+L+
Sbjct: 249 EAIIWQMGTGMKP--NLSQIGMGK------EISDILLFCWAFEQEERPTFTKLM------ 294
Query: 665 QMEYELLDNILRMMHSSEDTSIYDK 689
++L+ + + + K
Sbjct: 295 ----DMLEKLPKRNRRLSHPGHFWK 315
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271 | Back alignment and structure |
|---|
Score = 133 bits (338), Expect = 6e-35
Identities = 52/320 (16%), Positives = 96/320 (30%), Gaps = 79/320 (24%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
L L G + K + G VK ++++D S + E L H
Sbjct: 9 FKQLNFLTKLNENHSGEL--WKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSH 66
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+V+ G + + +
Sbjct: 67 PNVLPVL------GAC--------------------------------QSPPAPHPTLIT 88
Query: 474 EYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNIFFDA 528
+ P +L V + D+ A + G+A +H I L ++ D
Sbjct: 89 HWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDE 148
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--I 586
+I + G++ + APE Q P+
Sbjct: 149 DMTARISMADVKFSF--------------------QSPGRMYAPAWVAPEALQKKPEDTN 188
Query: 587 DEKADMYSLGIVFFELW---HPFS--TAME--RQIVLSDLKQKGELPPSWVAKFSEQESL 639
ADM+S ++ +EL PF+ + ME ++ L L+ +PP S+ L
Sbjct: 189 RRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP--TIPPGISPHVSK---L 243
Query: 640 LRRLMSPSPSDRPSATELLQ 659
++ M+ P+ RP ++
Sbjct: 244 MKICMNEDPAKRPKFDMIVP 263
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 7e-35
Identities = 66/312 (21%), Positives = 123/312 (39%), Gaps = 74/312 (23%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKI---RLKDKSLPVN-DRILREVATLSRLQHQHVVR 418
LG G F V C+ K G YA K I + + V + I REV+ L ++ H +++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
+ +E T + + +E
Sbjct: 80 LHDV-YEN---------------------------------------RTDVVLILELV-- 97
Query: 479 TLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----D 531
+ ++F+ + +E A +QI++G+ ++H + I H DL P NI +N
Sbjct: 98 SGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPH 157
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
IK+ DFGLA ++ ++ GT + APEI P + +AD
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNI----------------FGTPEFVAPEIVNYEP-LGLEAD 200
Query: 592 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPS 647
M+S+G++ + L PF +++ + + + + ++ SE + +R+L+
Sbjct: 201 MWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKE 260
Query: 648 PSDRPSATELLQ 659
R + E L+
Sbjct: 261 TRKRLTIQEALR 272
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342 | Back alignment and structure |
|---|
Score = 135 bits (343), Expect = 7e-35
Identities = 70/350 (20%), Positives = 123/350 (35%), Gaps = 99/350 (28%)
Query: 336 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 395
V S + S ++ + +E + +G G + C +K +AVK I DKS
Sbjct: 3 TVGVHSIVQQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII---DKSK 59
Query: 396 PVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 454
E+ L R QH +++ ++
Sbjct: 60 ---RDPTEEIEILLRYGQHPNIITLKDV-YDD---------------------------- 87
Query: 455 ADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508
Y+Y+ E + LRQ F + A + I + + +
Sbjct: 88 -----------GKYVYVVTELMKGGELLDKILRQK-----FFSEREASAVLFTITKTVEY 131
Query: 509 IHGQGIIHRDLTPNNIFFDARND----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564
+H QG++HRDL P+NI + + I+I DFG AK L+ E
Sbjct: 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN-----GLLMTP------ 180
Query: 565 GTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF-STAMERQIVLSD 618
T + APE+ QG+ D D++SLG++ + + + PF + + +
Sbjct: 181 ----CYTANFVAPEVLERQGY---DAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILA 233
Query: 619 LKQKGEL---PPSW-----VAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
G+ W AK L+ +++ P R +A +L+
Sbjct: 234 RIGSGKFSLSGGYWNSVSDTAK-----DLVSKMLHVDPHQRLTAALVLRH 278
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336 | Back alignment and structure |
|---|
Score = 135 bits (342), Expect = 7e-35
Identities = 77/384 (20%), Positives = 135/384 (35%), Gaps = 96/384 (25%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 421
LG G FG V L + + A+K I R K ++ R+ RE++ L L+H H+++ Y
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 481
T T + + +EY L
Sbjct: 77 VI-TT---------------------------------------PTDIVMVIEYAGGELF 96
Query: 482 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
++ F+QI+ + + H I+HRDL P N+ D ++KI DFGL+
Sbjct: 97 DYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSN 156
Query: 542 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 601
+ T G+ Y APE+ G + D++S GIV +
Sbjct: 157 IMT-----DGNFLKT-----------SCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYV 200
Query: 602 L---WHPFS----TAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPS 653
+ PF + +++ P +++ +SL+RR++ P R +
Sbjct: 201 MLVGRLPFDDEFIPNLFKKV------NSCVYVMPDFLS--PGAQSLIRRMIVADPMQRIT 252
Query: 654 ATELLQD---------ALPPQMEY-------ELLDNILRMMHSSEDTSIYDKVVSSIFDE 697
E+ +D L P E ++ + M SED I + + S +E
Sbjct: 253 IQEIRRDPWFNVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSEDY-IVEALRSDENNE 311
Query: 698 ET------LDMKHHAGTLRLNRDN 715
+ + L + +
Sbjct: 312 VKEAYNLLHENQVIQEKLEHHHHH 335
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400 | Back alignment and structure |
|---|
Score = 137 bits (346), Expect = 8e-35
Identities = 67/340 (19%), Positives = 120/340 (35%), Gaps = 88/340 (25%)
Query: 343 SPNMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRI 401
+ + + ++D++ Q LG G G V+ NK +A+K + +
Sbjct: 49 KSGLQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML---QDC----PKA 101
Query: 402 LREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 460
REV R H+VR +E A
Sbjct: 102 RREVELHWRASQCPHIVRIVDV-YENLYA------------------------------- 129
Query: 461 ENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514
L I ME R + +++ + A + + I E + ++H I
Sbjct: 130 ----GRKCLLIVMECLDGGELFSRIQDRGDQAFTERE---ASEIMKSIGEAIQYLHSINI 182
Query: 515 IHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
HRD+ P N+ + ++ +K+ DFG AK T
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTP----------------CYT 226
Query: 572 YFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL-------WHPFSTAMERQIVLSDLKQK 622
+Y APE+ + + D+ DM+SLG++ + L + A+ + +
Sbjct: 227 PYYVAPEVLGPEKY---DKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQ 283
Query: 623 GELP-PSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
E P P W ++ SE+ + L+R L+ P+ R + TE +
Sbjct: 284 YEFPNPEW-SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 1e-34
Identities = 83/321 (25%), Positives = 130/321 (40%), Gaps = 75/321 (23%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREVATL 408
RY + + LG GG V L ++ + A+K I + + + R REV
Sbjct: 12 RY----KIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEET--LKRFEREVHNS 65
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
S+L HQ++V DV +E+
Sbjct: 66 SQLSHQNIVSMI-----------------------------------DV-DEEDDCY--- 86
Query: 469 LYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
Y+ MEY TL + ES+ + A + QI++G+ H H I+HRD+ P NI D
Sbjct: 87 -YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID 145
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
+ +KI DFG+AK L L T T V +GT Y +PE +G D
Sbjct: 146 SNKTLKIFDFGIAKALSETSL-------TQTNHV-------LGTVQYFSPEQAKGEA-TD 190
Query: 588 EKADMYSLGIVFFELW---HPFS--TAMERQIVLSDLKQKGELPPSWVAKF--SEQESLL 640
E D+YS+GIV +E+ PF+ TA+ I + ++ + V K +++
Sbjct: 191 ECTDIYSIGIVLYEMLVGEPPFNGETAV--SIAIKHIQDSVPNVTTDVRKDIPQSLSNVI 248
Query: 641 RRLMSPSPSDRP-SATELLQD 660
R ++R + E+ D
Sbjct: 249 LRATEKDKANRYKTIQEMKDD 269
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 2e-34
Identities = 64/342 (18%), Positives = 109/342 (31%), Gaps = 93/342 (27%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
D L+ +G G +G V + G + AVK +D+ + E+ L+H++
Sbjct: 9 DITLLECVGKGRYGEV--WRGSWQGENVAVKIFSSRDEKSWFRET---ELYNTVMLRHEN 63
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
++ + M ST L++ Y
Sbjct: 64 ILGFI------------ASDMTSRH------------------------SSTQLWLITHY 87
Query: 476 CPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--------GIIHRDLTPNNIFF 526
+L + D + I GLAH+H + I HRDL NI
Sbjct: 88 HEMGSLYDYLQLT-TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV 146
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586
I D GLA D +VGT Y APE+ ++
Sbjct: 147 KKNGQCCIADLGLAVMHSQSTNQLDVGN-----------NPRVGTKRYMAPEVLDETIQV 195
Query: 587 D-----EKADMYSLGIVFFELW-------------HPFSTAMERQIVLSDLK----QKG- 623
D ++ D+++ G+V +E+ PF + D++
Sbjct: 196 DCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQ 255
Query: 624 --ELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 659
+P W + + L +LM +PS R +A + +
Sbjct: 256 RPNIPNRWFS--DPTLTSLAKLMKECWYQNPSARLTALRIKK 295
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 2e-34
Identities = 71/313 (22%), Positives = 120/313 (38%), Gaps = 84/313 (26%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 421
LG G FG V + +++L G AVK + R K +SL V +I RE+ L +H H+++ YQ
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 481
T T ++ MEY
Sbjct: 79 VI-ST---------------------------------------PTDFFMVMEYVSGG-- 96
Query: 482 QVFESYDH------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
E +D+ ++ A LF+QI+ + + H ++HRDL P N+ DA + KI
Sbjct: 97 ---ELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 153
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFGL+ + T G+ Y APE+ G + D++S
Sbjct: 154 DFGLSNMMS-----DGEFLRT-----------SCGSPNYAAPEVISGRLYAGPEVDIWSC 197
Query: 596 GIVFFELWH---PFS----TAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPS 647
G++ + L PF + ++I + G P ++ +LL ++
Sbjct: 198 GVILYALLCGTLPFDDEHVPTLFKKI------RGGVFYIPEYLN--RSVATLLMHMLQVD 249
Query: 648 PSDRPSATELLQD 660
P R + ++ +
Sbjct: 250 PLKRATIKDIREH 262
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337 | Back alignment and structure |
|---|
Score = 134 bits (338), Expect = 3e-34
Identities = 75/363 (20%), Positives = 120/363 (33%), Gaps = 97/363 (26%)
Query: 338 SVDSGSPNMSLPSSRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS 394
S SGS LP +++Q +G G +G V K G AVK +++
Sbjct: 18 SQSSGS-GSGLPLLVQRTIAKQIQMVKQIGKGRYGEV--WMGKWRGEKVAVKVFFTTEEA 74
Query: 395 LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 454
+ E+ ++H++++ + AD G W
Sbjct: 75 SWFRET---EIYQTVLMRHENILGFI------A-ADIKGTGSW----------------- 107
Query: 455 ADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ- 512
T LY+ +Y +L +S D + L V GL H+H +
Sbjct: 108 ------------TQLYLITDYHENGSLYDYLKSTT-LDAKSMLKLAYSSVSGLCHLHTEI 154
Query: 513 -------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565
I HRDL NI I D GLA F +DT V +
Sbjct: 155 FSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVK-----------FISDTNEVDIPP 203
Query: 566 TGQVGTYFYTAPEIEQGWPKI-----DEKADMYSLGIVFFELW-------------HPFS 607
+VGT Y PE+ ADMYS G++ +E+ P+
Sbjct: 204 NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH 263
Query: 608 TAMERQIVLSDLK----QKG---ELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATE 656
+ D++ K P W + E + +LM + +P+ R +A
Sbjct: 264 DLVPSDPSYEDMREIVCIKKLRPSFPNRWSSD--ECLRQMGKLMTECWAHNPASRLTALR 321
Query: 657 LLQ 659
+ +
Sbjct: 322 VKK 324
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342 | Back alignment and structure |
|---|
Score = 133 bits (336), Expect = 5e-34
Identities = 67/372 (18%), Positives = 120/372 (32%), Gaps = 97/372 (26%)
Query: 329 SRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYAV 385
+ + SGS LP + +G G FG V + K G AV
Sbjct: 14 TTLKDLIYDMTTSGS-GSGLPLLVQRTIARTIVLQESIGKGRFGEV--WRGKWRGEEVAV 70
Query: 386 KKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 445
K +++ + E+ L+H++++ + +GT
Sbjct: 71 KIFSSREER---SWFREAEIYQTVMLRHENILGFI------------AADNKDNGT---- 111
Query: 446 TFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVE 504
T L++ +Y +L Y E L
Sbjct: 112 --------------------WTQLWLVSDYHEHGSLFDYLNRYT-VTVEGMIKLALSTAS 150
Query: 505 GLAHIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 556
GLAH+H + I HRDL NI I D GLA D A
Sbjct: 151 GLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIA--- 207
Query: 557 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKI-----DEKADMYSLGIVFFELW-------- 603
+VGT Y APE+ + ++AD+Y++G+VF+E+
Sbjct: 208 --------PNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGI 259
Query: 604 -----HPFSTAMERQIVLSDLK----QKG---ELPPSWVAKFSEQESLLRRLM----SPS 647
P+ + + +++ ++ +P W + E ++ ++M +
Sbjct: 260 HEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQS--CEALRVMAKIMRECWYAN 317
Query: 648 PSDRPSATELLQ 659
+ R +A + +
Sbjct: 318 GAARLTALRIKK 329
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303 | Back alignment and structure |
|---|
Score = 131 bits (332), Expect = 7e-34
Identities = 71/344 (20%), Positives = 124/344 (36%), Gaps = 82/344 (23%)
Query: 340 DSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND 399
S + +R +D+E + +G G V A+K+I L +K D
Sbjct: 2 SEDSSALPWSINR--DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINL-EKCQTSMD 58
Query: 400 RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 459
+L+E+ +S+ H ++V YY ++ D +W
Sbjct: 59 ELLKEIQAMSQCHHPNIVSYYTSFV-------VKDELW---------------------- 89
Query: 460 QENKLESTYLYIQMEYCP---------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510
+ M+ + + D+ + R+++EGL ++H
Sbjct: 90 -----------LVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLH 138
Query: 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ-- 568
G IHRD+ NI ++I DFG+ +AF G ++ + +
Sbjct: 139 KNGQIHRDVKAGNILLGEDGSVQIADFGV------------SAFLATGGDITRNKVRKTF 186
Query: 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---------WHP----FSTAMERQIV 615
VGT + APE+ + D KAD++S GI EL + P T
Sbjct: 187 VGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPS 246
Query: 616 LSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
L Q E+ + F + ++ + P RP+A ELL+
Sbjct: 247 LETGVQDKEMLKKYGKSFRK---MISLCLQKDPEKRPTAAELLR 287
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331 | Back alignment and structure |
|---|
Score = 131 bits (333), Expect = 1e-33
Identities = 74/356 (20%), Positives = 130/356 (36%), Gaps = 92/356 (25%)
Query: 337 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 396
VD G+ N+ + + +E L +G G +G V+ C+NK GR A+KK D
Sbjct: 10 SGVDLGTENLY---FQSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKM 66
Query: 397 VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 456
V +RE+ L +L+H+++V +
Sbjct: 67 VKKIAMREIKLLKQLRHENLVNLL-----------------------------------E 91
Query: 457 VTGQENKLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGII 515
V ++ + Y+ E+ T+ E + + D ++ QI+ G+ H II
Sbjct: 92 VCKKKKRW-----YLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYT 575
HRD+ P NI +K+ DFG A+ L A P + +V T +Y
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTL---------AAPGEV------YDDEVATRWYR 191
Query: 576 APEIEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVL-------------- 616
APE+ G K + D++++G + E++ P + ++ Q+
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID-QLYHIMMCLGNLIPRHQE 250
Query: 617 --SDLKQ-KGELPPSWVAKFSEQE----------SLLRRLMSPSPSDRPSATELLQ 659
+ G P + + L ++ + P RP ELL
Sbjct: 251 LFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} Length = 465 | Back alignment and structure |
|---|
Score = 133 bits (337), Expect = 4e-33
Identities = 72/483 (14%), Positives = 157/483 (32%), Gaps = 91/483 (18%)
Query: 721 YSDLDTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLL------GDCPQFK-------- 763
+ + L Y++ + ++ + +E +E + +L GD +
Sbjct: 21 FLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKGNQGDNIIYGLEPILPPN 80
Query: 764 --RNTVKLLTHGGDLLELSHELRLPFIRWAISNQKS---SFKRYEISSVYRRAIGHSP-P 817
K G + L + +P + + F RY++ V+R
Sbjct: 81 RQAEKDKSGDTGSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRG---ERAKD 137
Query: 818 NRY---LQGDFDIIG--GASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSW 872
R+ Q D D++G S L +A++ + +I + I +N+ +L +
Sbjct: 138 GRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEIFEA-VNIGDFVIRINNRKVLTGFFQS 196
Query: 873 AGIKAEHREKVAELLAM-----MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQT 927
I + + + +G V + L++ + ++
Sbjct: 197 LNISETQIKSC--ISIIDNLEKIG--------EAK--V---KLELEKEGINPEQTQKIID 241
Query: 928 VGLRFCGAADQALPRLR---GALPADKPTRKALDEL-----YLRIWRI-EKNIYIDA--- 975
++ G+ D L +L+ LP + + EL +R + +K ID
Sbjct: 242 F-VKIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVRNLGVPDKRFCIDLAIA 300
Query: 976 --LMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRT 1033
L +Y+ ++ + + GGRY+ L+ +
Sbjct: 301 RGL-----NYYTGTVYETTLIGH------EALGSICSGGRYEELVGTFIGEKM------- 342
Query: 1034 NPPSGVGASLALETIIQH-YPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1092
GVG S+ L +I V+V + L+ +++ +L +
Sbjct: 343 ---PGVGISIGLTRLISRLLKAGILNTLPPTPAQVVVVN-MQDELMPTYLKVSQQLRQAG 398
Query: 1093 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLV 1152
+ L +Q++ A + I+ VI+ A ++ L ++ EV L
Sbjct: 399 LNVITNFEK-RQLGKQFQAADKQGIRFCVIIGADEAAAQKSSLKDLQSGEQVEVALADLA 457
Query: 1153 RFL 1155
+
Sbjct: 458 EEI 460
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476 | Back alignment and structure |
|---|
Score = 132 bits (335), Expect = 8e-33
Identities = 87/442 (19%), Positives = 149/442 (33%), Gaps = 107/442 (24%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKI-RLKDKSLPVNDRILREVATLSRLQHQHVVRYYQ 421
LG G FG V + K++L G AVK + R K +SL V +I RE+ L +H H+++ YQ
Sbjct: 24 LGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQ 83
Query: 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLR 481
T + +++ MEY
Sbjct: 84 VI-ST---------------------------------------PSDIFMVMEYVSGG-- 101
Query: 482 QVFESYDHFDK------ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
E +D+ K + + LF+QI+ G+ + H ++HRDL P N+ DA + KI
Sbjct: 102 ---ELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIA 158
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFGL+ + T G+ Y APE+ G + D++S
Sbjct: 159 DFGLSNMMS-----DGEFLRT-----------SCGSPNYAAPEVISGRLYAGPEVDIWSS 202
Query: 596 GIVFFELWH---PFS----TAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPS 647
G++ + L PF + ++I G P ++ SLL+ ++
Sbjct: 203 GVILYALLCGTLPFDDDHVPTLFKKI------CDGIFYTPQYLN--PSVISLLKHMLQVD 254
Query: 648 PSDRPSATELLQD----------ALPPQMEY-------ELLDNILRMMHSSEDTSIYDKV 690
P R + ++ + P Y E L + SE+ +
Sbjct: 255 PMKRATIKDIREHEWFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSEEEVLSCLY 314
Query: 691 VSSIFDEET------LDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHC 744
+ D +D + + TS D L + + +
Sbjct: 315 NRNHQDPLAVAYHLIIDNRRIMNEAKDFYLATSPPDSFLDDHHLTRPHPERVPFLVAETP 374
Query: 745 AKHLEIEPMYLLGDCPQFKRNT 766
++ + Q R
Sbjct: 375 RARHTLDELNPQKSKHQGVRKA 396
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310 | Back alignment and structure |
|---|
Score = 128 bits (324), Expect = 1e-32
Identities = 66/315 (20%), Positives = 107/315 (33%), Gaps = 58/315 (18%)
Query: 356 DFEEL---QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 412
+L + LG G FG K + L L+EV + L+
Sbjct: 8 RPSDLIHGEVLGKGCFGQA--IKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLE 65
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +V+++ GV + + L
Sbjct: 66 HPNVLKFI------GV----------------------------LYKDKR------LNFI 85
Query: 473 MEYCPR-TLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
EY TLR + +S D + + I G+A++H IIHRDL +N
Sbjct: 86 TEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENK 145
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
++ + DFGLA+ + ++ Q + VG ++ APE+ G DEK
Sbjct: 146 NVVVADFGLARLMV-DEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS-YDEKV 203
Query: 591 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG---ELPPSWVAKFSEQESLLRRLM 644
D++S GIV E+ + + R + + PP+ F + R
Sbjct: 204 DVFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLDRYCPPNCPPSFFP---ITVRCC 260
Query: 645 SPSPSDRPSATELLQ 659
P RPS +L
Sbjct: 261 DLDPEKRPSFVKLEH 275
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287 | Back alignment and structure |
|---|
Score = 127 bits (322), Expect = 1e-32
Identities = 64/328 (19%), Positives = 113/328 (34%), Gaps = 85/328 (25%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRIL-----REVATL 408
N+ E + +G GGFG V + D A+K + L D REV +
Sbjct: 18 DNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIM 77
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
S L H ++V+ Y G+ +
Sbjct: 78 SNLNHPNIVKLY------GL----------------------------MHNP-------- 95
Query: 469 LYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQG--IIHRDLTPNNI 524
+ ME+ P L H + L I G+ ++ Q I+HRDL NI
Sbjct: 96 PRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNI 155
Query: 525 FFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579
F + ++ K+ DFGL++ +G +G + + APE
Sbjct: 156 FLQSLDENAPVCAKVADFGLSQQ------------------SVHSVSGLLGNFQWMAPET 197
Query: 580 EQGWPKI-DEKADMYSLGIVFFELW---HPFSTAMERQI-VLSDLKQKG---ELPPSWVA 631
+ EKAD YS ++ + + PF +I ++ ++++G +P
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPP 257
Query: 632 KFSEQESLLRRLMSPSPSDRPSATELLQ 659
+ ++ S P RP + +++
Sbjct: 258 RLRN---VIELCWSGDPKKRPHFSYIVK 282
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311 | Back alignment and structure |
|---|
Score = 128 bits (323), Expect = 2e-32
Identities = 67/340 (19%), Positives = 122/340 (35%), Gaps = 91/340 (26%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ +E++ +G G +G V C+N+ G+ A+KK + + LRE+ L +L+H
Sbjct: 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKH 61
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V +V ++ +L ++
Sbjct: 62 PNLVNLL-----------------------------------EVFRRKRRL-----HLVF 81
Query: 474 EYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
EYC T+ + Y + L + Q ++ + H IHRD+ P NI + I
Sbjct: 82 EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVI 141
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 591
K+ DFG A+ L D +V T +Y +PE+ G + D
Sbjct: 142 KLCDFGFARLL----------------TGPSDYYDDEVATRWYRSPELLVGDTQYGPPVD 185
Query: 592 MYSLGIVFFELWH-----PFSTAMERQIVL----------------SDLKQ-KGELPPSW 629
++++G VF EL P + ++ Q+ L S + G P
Sbjct: 186 VWAIGCVFAELLSGVPLWPGKSDVD-QLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDP 244
Query: 630 VAKFSEQE----------SLLRRLMSPSPSDRPSATELLQ 659
+ LL+ + P++R + +LL
Sbjct: 245 EDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLH 284
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271 | Back alignment and structure |
|---|
Score = 126 bits (318), Expect = 2e-32
Identities = 68/327 (20%), Positives = 113/327 (34%), Gaps = 88/327 (26%)
Query: 356 DFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN--DRILREVATLSR 410
DF EL +G GGFG V + G AVK R + + +E +
Sbjct: 5 DFAELTLEEIIGIGGFGKV--YRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAM 62
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
L+H +++ GV + N L
Sbjct: 63 LKHPNIIALR------GV----------------------------CLKEPN------LC 82
Query: 471 IQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG---IIHRDLTPNNIFF 526
+ ME+ L +V ++ + QI G+ ++H + IIHRDL +NI
Sbjct: 83 LVMEFARGGPLNRVLSG-KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILI 141
Query: 527 D--------ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578
+ +KI DFGLA+ G Y + APE
Sbjct: 142 LQKVENGDLSNKILKITDFGLAREWH-----------------RTTKMSAAGAYAWMAPE 184
Query: 579 IEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG---ELPPSWVAK 632
+ + + +D++S G++ +EL PF ++ V + +P +
Sbjct: 185 VIRASM-FSKGSDVWSYGVLLWELLTGEVPFRG-IDGLAVAYGVAMNKLALPIPSTCPEP 242
Query: 633 FSEQESLLRRLMSPSPSDRPSATELLQ 659
F++ L+ +P P RPS T +L
Sbjct: 243 FAK---LMEDCWNPDPHSRPSFTNILD 266
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336 | Back alignment and structure |
|---|
Score = 128 bits (322), Expect = 3e-32
Identities = 66/360 (18%), Positives = 117/360 (32%), Gaps = 95/360 (26%)
Query: 346 MSLPSSRYLNDFEELQ---PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRIL 402
M +S D + L+ +G G +G V K LD R AVK ++ +N++
Sbjct: 1 MEAAASEPSLDLDNLKLLELIGRGRYGAV--YKGSLDERPVAVKVFSFANRQNFINEK-- 56
Query: 403 REVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 462
+ + ++H ++ R+ +
Sbjct: 57 -NIYRVPLMEHDNIARFI------------VGDERVTADG-------------------- 83
Query: 463 KLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--------- 512
+ MEY P +L + + D + L + GLA++H +
Sbjct: 84 ---RMEYLLVMEYYPNGSLXKYLSLHT-SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKP 139
Query: 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572
I HRDL N+ I DFGL+ L G +VGT
Sbjct: 140 AISHRDLNSRNVLVKNDGTCVISDFGLSMRL-------TGNRLVRPGEEDNAAISEVGTI 192
Query: 573 FYTAPEI------EQGWPKIDEKADMYSLGIVFFELW------HPFSTAMERQIVLSDL- 619
Y APE+ + ++ DMY+LG++++E++ P + E Q+
Sbjct: 193 RYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEV 252
Query: 620 ----------------KQKGELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 659
KQ+ + P +W + S L+ + R +A +
Sbjct: 253 GNHPTFEDMQVLVSREKQRPKFPEAW-KENSLAVRSLKETIEDCWDQDAEARLTAQXAEE 311
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309 | Back alignment and structure |
|---|
Score = 126 bits (320), Expect = 3e-32
Identities = 69/321 (21%), Positives = 107/321 (33%), Gaps = 75/321 (23%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREVATL 408
Y + +G GG G V ++ + R A+K + D R+ RE T
Sbjct: 35 PY----RLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVF--RTRMQREARTA 88
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
RLQ HVV + D G+ +
Sbjct: 89 GRLQEPHVVPIH-----------------------------------DF-GEIDGQ---- 108
Query: 469 LYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
LY+ M L + A + RQI L H G HRD+ P NI
Sbjct: 109 LYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS 168
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
A + + DFG+A T G VGT +Y APE
Sbjct: 169 ADDFAYLVDFGIASAT-------TDEKLTQLGNT-------VGTLYYMAPERFSESH-AT 213
Query: 588 EKADMYSLGIVFFEL---WHPF---STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLR 641
+AD+Y+L V +E P+ ++ + + + + P F ++++
Sbjct: 214 YRADIYALTCVLYECLTGSPPYQGDQLSVMGAHINQAIPRPSTVRPGIPVAF---DAVIA 270
Query: 642 RLMSPSPSDR-PSATELLQDA 661
R M+ +P DR + +L A
Sbjct: 271 RGMAKNPEDRYVTCGDLSAAA 291
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 3e-32
Identities = 84/354 (23%), Positives = 140/354 (39%), Gaps = 98/354 (27%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
F +L+ +G G FG V + + A+K I L++ + D I +E+ LS+ +
Sbjct: 23 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIED-IQQEITVLSQCDSPY 81
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
V +YY ++ + +W I MEY
Sbjct: 82 VTKYYGSYLK-------DTKLW---------------------------------IIMEY 101
Query: 476 C----------PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIF 525
P L + + + R+I++GL ++H + IHRD+ N+
Sbjct: 102 LGGGSALDLLEPGPLDETQIAT----------ILREILKGLDYLHSEKKIHRDIKAANVL 151
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWP 584
++K+ DFG+A L + + F VGT F+ APE I+Q
Sbjct: 152 LSEHGEVKLADFGVAGQLT-DTQIKRNTF--------------VGTPFWMAPEVIKQS-- 194
Query: 585 KIDEKADMYSLGIVFFELWH---PFST--AMERQIVLSDLKQKGELPPSWVAKFSEQ-ES 638
D KAD++SLGI EL P S M+ VL + + PP+ +S+ +
Sbjct: 195 AYDSKADIWSLGITAIELARGEPPHSELHPMK---VLFLIPKNN--PPTLEGNYSKPLKE 249
Query: 639 LLRRLMSPSPSDRPSATELLQ------DALPPQMEYELLD--NILRMMHSSEDT 684
+ ++ PS RP+A ELL+ +A EL+D + S +D+
Sbjct: 250 FVEACLNKEPSFRPTAKELLKHKFILRNAKKTSYLTELIDRYKRWKAEQSHDDS 303
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360 | Back alignment and structure |
|---|
Score = 128 bits (322), Expect = 4e-32
Identities = 70/328 (21%), Positives = 126/328 (38%), Gaps = 78/328 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKP-AIRNQIIRELQVLHECNS 90
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V +Y A++ DG+ + I M
Sbjct: 91 PYIVGFYGAFYS------DGE----------------------------------ISICM 110
Query: 474 EYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-IIHRDLTPNNIFFDARND 531
E+ L QV + +++ + +++GL ++ + I+HRD+ P+NI ++R +
Sbjct: 111 EHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGE 170
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
IK+ DFG++ L D+ S VGT Y +PE QG ++D
Sbjct: 171 IKLCDFGVSGQL------------IDSMANSF-----VGTRSYMSPERLQG-THYSVQSD 212
Query: 592 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
++S+G+ E+ +P + + + E
Sbjct: 213 IWSMGLSLVEMAVGRYPIPPP--------------DAKELELMFGCQVEGDAAETPPRPR 258
Query: 649 SDRPSATELLQDALPPQMEYELLDNILR 676
+ + D+ PP +ELLD I+
Sbjct: 259 TPGRPLNKFGMDSRPPMAIFELLDYIVN 286
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
Score = 133 bits (335), Expect = 6e-32
Identities = 56/315 (17%), Positives = 101/315 (32%), Gaps = 79/315 (25%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCK-NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR 410
+Y E + HGG G + L ++GR +K + + + E L+
Sbjct: 81 QY----EVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQ-AMAMAERQFLAE 135
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
+ H +V+ + + ++ Y
Sbjct: 136 VVHPSIVQIF-----------------------------------NFVEHTDRHGDPVGY 160
Query: 471 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
I MEY ++L++ A +I+ L+++H G+++ DL P NI
Sbjct: 161 IVMEYVGGQSLKRSKG--QKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT-E 217
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
+K+ D G + G + GT + APEI + P
Sbjct: 218 EQLKLIDLGAVSRI------------NSFGYL-------YGTPGFQAPEIVRTGP--TVA 256
Query: 590 ADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646
D+Y++G L + + D + S+ LLRR + P
Sbjct: 257 TDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDP--VLKTYDSY-------GRLLRRAIDP 307
Query: 647 SPSDRP-SATELLQD 660
P R +A E+
Sbjct: 308 DPRQRFTTAEEMSAQ 322
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 3e-31
Identities = 58/251 (23%), Positives = 95/251 (37%), Gaps = 61/251 (24%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ + + +G+G FG V K G A+KK+ + RE+ + +L H ++
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNI 109
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
VR ++ +G K + YL + ++Y
Sbjct: 110 VRLRYFFYSSG----------------------------------EKKDEVYLNLVLDYV 135
Query: 477 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
P T+ +V Y + L + Q+ LA+IH GI HRD+ P N+ D +
Sbjct: 136 PETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV 195
Query: 533 -KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
K+ DFG AK QL + + + +Y APE+ G D
Sbjct: 196 LKLCDFGSAK-----QLVRGEPN-----------VSYICSRYYRAPELIFGATDYTSSID 239
Query: 592 MYSLGIVFFEL 602
++S G V EL
Sbjct: 240 VWSAGCVLAEL 250
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 4e-31
Identities = 75/367 (20%), Positives = 124/367 (33%), Gaps = 111/367 (30%)
Query: 338 SVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPV 397
VD G+ N+ S + L+ G FG V K +L + AVK ++DK
Sbjct: 11 GVDLGTENLYFQS----MPLQLLEVKARGRFGCV--WKAQLLNEYVAVKIFPIQDKQSWQ 64
Query: 398 NDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADV 457
N+ EV +L ++H++++++ G G+
Sbjct: 65 NEY---EVYSLPGMKHENILQFI------------GAEKRGTSV---------------- 93
Query: 458 TGQENKLESTYLYIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVE----GLAHIHG 511
L++ + + +L D ++W+ I E GLA++H
Sbjct: 94 --------DVDLWLITAFHEKGSL------SDFLKANVVSWNELCHIAETMARGLAYLHE 139
Query: 512 Q----------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 561
I HRD+ N+ I DFGLA + G
Sbjct: 140 DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKF-------------EAGKS 186
Query: 562 SVDGTGQVGTYFYTAPEIEQGWPKI----DEKADMYSLGIVFFELW-------------- 603
+ D GQVGT Y APE+ +G + DMY++G+V +EL
Sbjct: 187 AGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYM 246
Query: 604 HPFSTAMERQIVLSDLK----QKG---ELPPSWVAKFSEQESLLRRLM----SPSPSDRP 652
PF + + L D++ K L W ++L + R
Sbjct: 247 LPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQK--HAGMAMLCETIEECWDHDAEARL 304
Query: 653 SATELLQ 659
SA + +
Sbjct: 305 SAGCVGE 311
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311 | Back alignment and structure |
|---|
Score = 123 bits (312), Expect = 5e-31
Identities = 78/363 (21%), Positives = 135/363 (37%), Gaps = 95/363 (26%)
Query: 341 SGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR 400
S +L + +++L+ +G G +G V K+ GR A+K+IRL + +
Sbjct: 7 HSSGRENLYFQGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPST 65
Query: 401 ILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQ 460
+RE++ L L H ++V DV
Sbjct: 66 AIREISLLKELHHPNIVSLI-----------------------------------DVIHS 90
Query: 461 ENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 519
E L + E+ + L++V + Q++ G+AH H I+HRDL
Sbjct: 91 ERCL-----TLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDL 145
Query: 520 TPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPE 578
P N+ ++ +K+ DFGLA+ AF G+ V T +V T +Y AP+
Sbjct: 146 KPQNLLINSDGALKLADFGLAR-----------AF-----GIPVRSYTHEVVTLWYRAPD 189
Query: 579 IEQGWPKIDEKADMYSLGIVFFELWH-----PFSTAMERQIVL----------------S 617
+ G K D++S+G +F E+ P T + Q+
Sbjct: 190 VLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD-QLPKIFSILGTPNPREWPQVQ 248
Query: 618 DLKQ-KGELPPSW--------VAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ----DALP 663
+L K + + F ++ LL ++ P+ R SA + + L
Sbjct: 249 ELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD 308
Query: 664 PQM 666
PQ+
Sbjct: 309 PQI 311
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 7e-31
Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 58/251 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ +E+L+ +G G +G V KN+ A+K++RL D V LRE+ L L+H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+++VR + DV + KL +
Sbjct: 61 KNIVRLH-----------------------------------DVLHSDKKL-----TLVF 80
Query: 474 EYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
E+C + L++ F+S D E+ Q+++GL H + ++HRDL P N+ + ++
Sbjct: 81 EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGEL 140
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 591
K+ +FGLA+ AF G+ V + +V T +Y P++ G D
Sbjct: 141 KLANFGLAR-----------AF-----GIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSID 184
Query: 592 MYSLGIVFFEL 602
M+S G +F EL
Sbjct: 185 MWSAGCIFAEL 195
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365 | Back alignment and structure |
|---|
Score = 124 bits (312), Expect = 9e-31
Identities = 44/360 (12%), Positives = 94/360 (26%), Gaps = 88/360 (24%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVAT-L 408
LG G F V + + + +K + P I ++ L
Sbjct: 65 KLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQ---KPANPWEFYIGTQLMERL 121
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
+++Y A
Sbjct: 122 KPSMQHMFMKFYSA-HLF---------------------------------------QNG 141
Query: 469 LYIQMEYCPR-TLRQVFESYDH-----FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 522
+ E TL Y + + L +++ + +H IIH D+ P+
Sbjct: 142 SVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPD 201
Query: 523 NIFF-----------DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
N D + + D G + +KL + F T + T
Sbjct: 202 NFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKL--FPKGTIF-----------TAKCET 248
Query: 572 YFYTAPEI--EQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSW 629
+ E+ + W + + D + + + + F T M+ + + K +G
Sbjct: 249 SGFQCVEMLSNKPW---NYQIDYFGVAATVYCML--FGTYMKVKNEGGECKPEGLFRRLP 303
Query: 630 VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDK 689
+++ + +LL+ L + + I + + + K
Sbjct: 304 --HLDMWNEFFHVMLNIPDCHHLPSLDLLRQKLKKVFQQHYTNKIRALRNRLIVLLLECK 361
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329 | Back alignment and structure |
|---|
Score = 123 bits (310), Expect = 1e-30
Identities = 55/263 (20%), Positives = 102/263 (38%), Gaps = 62/263 (23%)
Query: 347 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA 406
+ PS+ ++ + + LG G +G V + + A+K+IRL+ + V +REV+
Sbjct: 26 AAPSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVS 85
Query: 407 TLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES 466
L LQH++++ V ++L
Sbjct: 86 LLKELQHRNIIELK-----------------------------------SVIHHNHRL-- 108
Query: 467 TYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
++ EY L++ + + Q++ G+ H + +HRDL P N+
Sbjct: 109 ---HLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLL 165
Query: 527 DARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIE 580
+ +KIGDFGLA+ AF G+ + T ++ T +Y PEI
Sbjct: 166 SVSDASETPVLKIGDFGLAR-----------AF-----GIPIRQFTHEIITLWYRPPEIL 209
Query: 581 QGWPKIDEKADMYSLGIVFFELW 603
G D++S+ ++ E+
Sbjct: 210 LGSRHYSTSVDIWSIACIWAEML 232
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394 | Back alignment and structure |
|---|
Score = 124 bits (313), Expect = 2e-30
Identities = 72/338 (21%), Positives = 120/338 (35%), Gaps = 91/338 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ + +G+G FG V K A+KK+ DK RE+ + ++H +V
Sbjct: 42 YTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQ-DK-----RFKNRELQIMRIVKHPNV 94
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V ++ G +K + +L + +EY
Sbjct: 95 VDLKAFFYSNG----------------------------------DKKDEVFLNLVLEYV 120
Query: 477 PRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIHGQGIIHRDLTPNNIFFDARND- 531
P T+ + Y + + L + Q++ LA+IH GI HRD+ P N+ D +
Sbjct: 121 PETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGV 180
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+K+ DFG AK L + + + +Y APE+ G D
Sbjct: 181 LKLIDFGSAKILI----------AGEP------NVSYICSRYYRAPELIFGATNYTTNID 224
Query: 592 MYSLGIVFFELW--HP-FS----------------TAMERQI-VLSDLKQKGELPP---- 627
++S G V EL P F T QI ++ + + P
Sbjct: 225 IWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPH 284
Query: 628 SWVAKFSEQES-----LLRRLMSPSPSDRPSATELLQD 660
+ F + L+ RL+ +PS R +A E L
Sbjct: 285 PFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCH 322
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348 | Back alignment and structure |
|---|
Score = 122 bits (309), Expect = 2e-30
Identities = 76/364 (20%), Positives = 132/364 (36%), Gaps = 95/364 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQH 415
F +L+ +GHG FG V ++ + A+KK+ K + I++EV L +L+H +
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
++Y + + W + MEY
Sbjct: 116 TIQYRGCYLR-------EHTAW---------------------------------LVMEY 135
Query: 476 CPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
C + + E + + + ++GLA++H +IHRD+ NI +K+
Sbjct: 136 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 195
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI--DEKADM 592
GDFG A + +F VGT ++ APE+ + D K D+
Sbjct: 196 GDFGSA-----SIMAPANSF--------------VGTPYWMAPEVILAMDEGQYDGKVDV 236
Query: 593 YSLGIVFFEL---------WHPFSTAMERQIVLSDLKQKGELPPS-----WVAKFSEQES 638
+SLGI EL + S L + Q P+ W F
Sbjct: 237 WSLGITCIELAERKPPLFNMNAMS-------ALYHIAQNE--SPALQSGHWSEYFRN--- 284
Query: 639 LLRRLMSPSPSDRPSATELLQ-----DALPPQMEYELLDNILRMMHSSEDTSIYDKVVSS 693
+ + P DRP++ LL+ PP + +L+ + ++ Y K+
Sbjct: 285 FVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVRELDNLQ-YRKMKKI 343
Query: 694 IFDE 697
+F E
Sbjct: 344 LFQE 347
|
| >1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 2e-30
Identities = 76/344 (22%), Positives = 123/344 (35%), Gaps = 106/344 (30%)
Query: 337 PSVDSGSPNMSLPSSRY----LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR--- 389
P +GS + P + DF+ + LG G F VVL + R YA+K +
Sbjct: 8 PRPGAGSLQHAQPPPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH 67
Query: 390 -LKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 448
+K+ + + RE +SRL H V+ Y F+
Sbjct: 68 IIKENKV---PYVTRERDVMSRLDHPFFVKLYFT-FQD---------------------- 101
Query: 449 NRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFR-------- 500
LY + Y + EL ++ +
Sbjct: 102 -----------------DEKLYFGLSYAK-------------NGELLKYIRKIGSFDETC 131
Query: 501 ------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF 554
+IV L ++HG+GIIHRDL P NI + I+I DFG AK +
Sbjct: 132 TRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAK----VLSPESKQA 187
Query: 555 PTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTA 609
++ VGT Y +PE+ E+ K +D+++LG + ++L PF
Sbjct: 188 RANSF---------VGTAQYVSPELLTEKSACK---SSDLWALGCIIYQLVAGLPPFRAG 235
Query: 610 MERQIVLSDLKQKGELPP--SWVAKFSEQESLLRRLMSPSPSDR 651
E I +K + + P A+ L+ +L+ + R
Sbjct: 236 NEYLIFQKIIKLEYDFPEKFFPKAR-----DLVEKLLVLDATKR 274
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360 | Back alignment and structure |
|---|
Score = 122 bits (308), Expect = 4e-30
Identities = 59/261 (22%), Positives = 103/261 (39%), Gaps = 59/261 (22%)
Query: 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL 408
S + ++ F+ + G G FG V L K K G A+KK+ D +R L+ + L
Sbjct: 17 RSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQ-DPRF--RNRELQIMQDL 73
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
+ L H ++V+ ++ G D D+ Y
Sbjct: 74 AVLHHPNIVQLQSYFYTLGERDRR-----------------------DI----------Y 100
Query: 469 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR----QIVEGLAHIH--GQGIIHRDLTPN 522
L + MEY P TL + +Y L + Q++ + +H + HRD+ P+
Sbjct: 101 LNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPH 160
Query: 523 NIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581
N+ + + +K+ DFG AK L P++ + + +Y APE+
Sbjct: 161 NVLVNEADGTLKLCDFGSAKKL----------SPSEP------NVAYICSRYYRAPELIF 204
Query: 582 GWPKIDEKADMYSLGIVFFEL 602
G D++S+G +F E+
Sbjct: 205 GNQHYTTAVDIWSVGCIFAEM 225
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346 | Back alignment and structure |
|---|
Score = 121 bits (307), Expect = 5e-30
Identities = 74/348 (21%), Positives = 121/348 (34%), Gaps = 91/348 (26%)
Query: 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP---VNDRIL 402
M+L +E+L LG G F V ++K + A+KKI+L +S +N L
Sbjct: 1 MALDVKSRAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTAL 60
Query: 403 REVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 462
RE+ L L H +++ D G ++
Sbjct: 61 REIKLLQELSHPNIIGLL-----------------------------------DAFGHKS 85
Query: 463 KLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTP 521
+ + ++ L + + ++GL ++H I+HRDL P
Sbjct: 86 NI-----SLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKP 140
Query: 522 NNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIE 580
NN+ D +K+ DFGLAK +F G T QV T +Y APE+
Sbjct: 141 NNLLLDENGVLKLADFGLAK-----------SF-----GSPNRAYTHQVVTRWYRAPELL 184
Query: 581 QGWPKIDEKADMYSLGIVFFELW--HPF---STAMERQIVL----------------SDL 619
G DM+++G + EL PF + ++ Q+ L
Sbjct: 185 FGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD-QLTRIFETLGTPTEEQWPDMCSL 243
Query: 620 KQKGELPP----SWVAKFSEQES----LLRRLMSPSPSDRPSATELLQ 659
FS L++ L +P R +AT+ L+
Sbjct: 244 PDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALK 291
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324 | Back alignment and structure |
|---|
Score = 120 bits (303), Expect = 8e-30
Identities = 73/352 (20%), Positives = 129/352 (36%), Gaps = 97/352 (27%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQ 412
+ + +L LG G + V K+KL A+K+IRL+ + P +REV+ L L+
Sbjct: 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCT--AIREVSLLKDLK 58
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H ++V + D+ E L +
Sbjct: 59 HANIVTLH-----------------------------------DIIHTEKSL-----TLV 78
Query: 473 MEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
EY + L+Q + + Q++ GLA+ H Q ++HRDL P N+ + R +
Sbjct: 79 FEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGE 138
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKA 590
+K+ DFGLA+ A + +V T +Y P+I G +
Sbjct: 139 LKLADFGLAR-----------AK-----SIPTKTYDNEVVTLWYRPPDILLGSTDYSTQI 182
Query: 591 DMYSLGIVFFELWH-----PFSTAMERQIVL----------------SDLKQ-KGELPPS 628
DM+ +G +F+E+ P ST E Q+ ++ K P
Sbjct: 183 DMWGVGCIFYEMATGRPLFPGSTVEE-QLHFIFRILGTPTEETWPGILSNEEFKTYNYPK 241
Query: 629 W--------VAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ----DALPPQME 667
+ + LL +L+ +R SA + ++ +L ++
Sbjct: 242 YRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIH 293
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308 | Back alignment and structure |
|---|
Score = 119 bits (301), Expect = 1e-29
Identities = 60/261 (22%), Positives = 95/261 (36%), Gaps = 60/261 (22%)
Query: 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL---KDKSLPVNDRILREVAT 407
S + +E + +G G +G V ++ G A+K +R+ + +REVA
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 408 LSRLQ---HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 464
L RL+ H +VVR DV
Sbjct: 65 LRRLEAFEHPNVVRLM-----------------------------------DVCATSRTD 89
Query: 465 ESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 522
+ + E+ + LR + E L RQ + GL +H I+HRDL P
Sbjct: 90 REIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPE 149
Query: 523 NIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582
NI + +K+ DFGLA+ + + T V T +Y APE+
Sbjct: 150 NILVTSGGTVKLADFGLAR-----------IY-----SYQMALTPVVVTLWYRAPEVLLQ 193
Query: 583 WPKIDEKADMYSLGIVFFELW 603
DM+S+G +F E++
Sbjct: 194 -STYATPVDMWSVGCIFAEMF 213
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 1e-29
Identities = 68/344 (19%), Positives = 117/344 (34%), Gaps = 108/344 (31%)
Query: 337 PSVDSGSPNMSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 395
P V SG + + + ++D++ Q LG G G V+ NK +A+K +
Sbjct: 2 PHVKSG---LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKML---QDC- 54
Query: 396 PVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASS 454
+ REV R Q H+VR +E A
Sbjct: 55 ---PKARREVELHWRASQCPHIVRIVDV-YENLYA------------------------- 85
Query: 455 ADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508
L I ME R + +++ + A + + I E + +
Sbjct: 86 ----------GRKCLLIVMECLDGGELFSRIQDRGDQAFTERE---ASEIMKSIGEAIQY 132
Query: 509 IHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565
+H I HRD+ P N+ + ++ +K+ DFG
Sbjct: 133 LHSINIAHRDVKPENLLYTSKRPNAILKLTDFGF-------------------------- 166
Query: 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL-------WHPFSTAMERQIVLSD 618
A E K D+ DM+SLG++ + L + A+ +
Sbjct: 167 ----------AKETTGE--KYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI 214
Query: 619 LKQKGELP-PSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
+ E P P W ++ SE+ + L+R L+ P+ R + TE +
Sbjct: 215 RMGQYEFPNPEW-SEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314 | Back alignment and structure |
|---|
Score = 119 bits (299), Expect = 2e-29
Identities = 67/318 (21%), Positives = 124/318 (38%), Gaps = 85/318 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
F+ L+ LG G +G V +K G+ A+K++ ++ I++E++ + + HV
Sbjct: 31 FDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL----QEIIKEISIMQQCDSPHV 86
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V+YY ++F+ +W I MEYC
Sbjct: 87 VKYYGSYFK-------NTDLW---------------------------------IVMEYC 106
Query: 477 PR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
++ + + ++ + + ++GL ++H IHRD+ NI + K+
Sbjct: 107 GAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKL 166
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594
DFG+A L + + + +GT F+ APE+ Q + AD++S
Sbjct: 167 ADFGVAGQLT-DTMAKRNTV--------------IGTPFWMAPEVIQEIG-YNCVADIWS 210
Query: 595 LGIVFFEL---------WHPFSTAMERQIVLSDLKQKG----ELPPSWVAKFSEQESLLR 641
LGI E+ HP + + P W F++ ++
Sbjct: 211 LGITAIEMAEGKPPYADIHPMR-------AIFMIPTNPPPTFRKPELWSDNFTD---FVK 260
Query: 642 RLMSPSPSDRPSATELLQ 659
+ + SP R +AT+LLQ
Sbjct: 261 QCLVKSPEQRATATQLLQ 278
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458 | Back alignment and structure |
|---|
Score = 121 bits (306), Expect = 3e-29
Identities = 67/281 (23%), Positives = 113/281 (40%), Gaps = 49/281 (17%)
Query: 336 KPSVDSGSPNMSLPSSRY--LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK 393
+ + +M P S + + +E +G G +GHV +KL+ R A+KKI +
Sbjct: 32 QHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFE 91
Query: 394 SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAAS 453
L RILRE+A L+RL H HVV+
Sbjct: 92 DLIDCKRILREIAILNRLNHDHVVKVL--------------------------------- 118
Query: 454 SADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513
D+ ++ + LY+ +E +++F + + + L ++ G+ ++H G
Sbjct: 119 --DIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAG 176
Query: 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-------- 565
I+HRDL P N + +K+ DFGLA+ + + +
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNL 236
Query: 566 ----TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
TG V T +Y APE+ E D++S+G +F EL
Sbjct: 237 KRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAEL 277
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389 | Back alignment and structure |
|---|
Score = 120 bits (301), Expect = 4e-29
Identities = 62/433 (14%), Positives = 122/433 (28%), Gaps = 116/433 (26%)
Query: 327 VSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHG--GFGHVVLCKNKLDGRHYA 384
++ + G + Y E L +G G V L + K G +
Sbjct: 1 MAHHHHHHMENLYFQGMSSFLPEGGCY----ELLTVIGKGFEDLMTVNLARYKPTGEYVT 56
Query: 385 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 444
V++I L+ S + + E+ H ++V Y +
Sbjct: 57 VRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF--------------------- 95
Query: 445 STFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQ 501
+ L++ + + + + ++ D ++ ++ +
Sbjct: 96 -------------------IADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQG 136
Query: 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG- 560
+++ L +IH G +HR + ++I + + G
Sbjct: 137 VLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRS------------NLSMISHGQR 184
Query: 561 ---VSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWH---PFS------ 607
V V + +PE ++Q D K+D+YS+GI EL + PF
Sbjct: 185 QRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQ 244
Query: 608 -------------------------TAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642
+ R + S L + R
Sbjct: 245 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHR 304
Query: 643 LMSPS------------PSDRPSATELLQDA----LPPQMEYELLDNILRMMHSSEDTSI 686
SP P RPSA+ LL + + + L + + + +
Sbjct: 305 TFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKRRASEALPELLRPVTPITNFEGS 364
Query: 687 YDKVVSSIFDEET 699
+ S IF T
Sbjct: 365 QSQDHSGIFGLVT 377
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320 | Back alignment and structure |
|---|
Score = 118 bits (297), Expect = 5e-29
Identities = 59/251 (23%), Positives = 99/251 (39%), Gaps = 50/251 (19%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ +L+PLG GG G V + + A+KKI L D LRE+ + RL H ++
Sbjct: 13 YMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVK--HALREIKIIRRLDHDNI 70
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V+ + + + + S + E +YI EY
Sbjct: 71 VKVF-------------EIL-------------GPSGSQLTDDVGSLTELNSVYIVQEYM 104
Query: 477 PRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-D 531
L V E +H Q++ GL +IH ++HRDL P N+F + +
Sbjct: 105 ETDLANVLEQGPLLEEHAR-----LFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLV 159
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+KIGDFGLA+ + + + + T +Y +P + + D
Sbjct: 160 LKIGDFGLARIMDPHYSHKGHL------------SEGLVTKWYRSPRLLLSPNNYTKAID 207
Query: 592 MYSLGIVFFEL 602
M++ G +F E+
Sbjct: 208 MWAAGCIFAEM 218
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351 | Back alignment and structure |
|---|
Score = 118 bits (299), Expect = 5e-29
Identities = 54/263 (20%), Positives = 99/263 (37%), Gaps = 48/263 (18%)
Query: 344 PNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK--DKSLPVNDRI 401
++ P ++ +E+L +G G FG V +++ G+ A+KK+ ++ + P+
Sbjct: 6 DSVECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPIT--A 63
Query: 402 LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQE 461
LRE+ L L+H++VV E
Sbjct: 64 LREIKILQLLKHENVVN----LIEICRTK----------------------------ASP 91
Query: 462 NKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520
+Y+ ++C L + + F + + ++ GL +IH I+HRD+
Sbjct: 92 YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK 151
Query: 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580
N+ +K+ DFGLA+ AF T +V T +Y PE+
Sbjct: 152 AANVLITRDGVLKLADFGLAR-----------AFSLAKNSQPNRYTNRVVTLWYRPPELL 200
Query: 581 QGWPKIDEKADMYSLGIVFFELW 603
G D++ G + E+W
Sbjct: 201 LGERDYGPPIDLWGAGCIMAEMW 223
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 6e-29
Identities = 59/251 (23%), Positives = 111/251 (44%), Gaps = 59/251 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ + L+ +G G +G V +N G +A+KKIRL+ + + +RE++ L L+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNNY-GETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V+ Y DV + +L +
Sbjct: 60 SNIVKLY-----------------------------------DVIHTKKRL-----VLVF 79
Query: 474 EYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
E+ + L+++ + + + A Q++ G+A+ H + ++HRDL P N+ + ++
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKIDEKAD 591
KI DFGLA+ AF G+ V T ++ T +Y AP++ G K D
Sbjct: 140 KIADFGLAR-----------AF-----GIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTID 183
Query: 592 MYSLGIVFFEL 602
++S+G +F E+
Sbjct: 184 IWSVGCIFAEM 194
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297 | Back alignment and structure |
|---|
Score = 116 bits (292), Expect = 1e-28
Identities = 63/316 (19%), Positives = 117/316 (37%), Gaps = 81/316 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ + +G G G V + G+ A++++ L+ + P + I+ E+ + ++ ++
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVMRENKNPNI 79
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V Y ++ GD +W + MEY
Sbjct: 80 VNYLDSYLV-------GDELW---------------------------------VVMEYL 99
Query: 477 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
+L V + ++A + R+ ++ L +H +IHRD+ +NI +K+
Sbjct: 100 AGGSLTDVVTETCMDEGQIA-AVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLT 158
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFG + + + + VGT ++ APE+ K D++SL
Sbjct: 159 DFGFCAQIT-PEQSKRSTM--------------VGTPYWMAPEVVTRKA-YGPKVDIWSL 202
Query: 596 GIVFFEL---------WHPFSTAMERQIVLSD---LKQKGELPPSWVAKFSEQESLLRRL 643
GI+ E+ +P A+ I + L+ P A F + L R
Sbjct: 203 GIMAIEMIEGEPPYLNENPLR-AL-YLIATNGTPELQN----PEKLSAIFRD---FLNRC 253
Query: 644 MSPSPSDRPSATELLQ 659
+ R SA ELLQ
Sbjct: 254 LEMDVEKRGSAKELLQ 269
|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A Length = 456 | Back alignment and structure |
|---|
Score = 120 bits (302), Expect = 1e-28
Identities = 69/447 (15%), Positives = 138/447 (30%), Gaps = 66/447 (14%)
Query: 725 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLL----GDCPQFKRNTVKLLTHGGDLL 777
R ++ V + + + +E L G+ +T GG +
Sbjct: 42 AMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEEIT--EQMFNFITKGGHRV 99
Query: 778 ELSHELRLPFIRWAISNQKSS---FKRYEISSVYRRAIGHSP-PNRY---LQGDFDIIGG 830
L E+ R + +S K Y I +R + R Q + DI+G
Sbjct: 100 ALRPEMTPSLARLLLGKGRSLLLPAKWYSIPQCWRY---EAITRGRRREHYQWNMDIVGV 156
Query: 831 ASALTEAEVLKVTMDIVTRF-FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAM 889
S E E++ + ++ I +N +L+ + AG+ ++ V ++
Sbjct: 157 KSVSAEVELVCAACWAMRSLGLSSKDVGIKVNSRKVLQTVVEQAGVTSDKFAPVCVIVDK 216
Query: 890 MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPA 949
M K + L L L VV+ + T + +++ + +
Sbjct: 217 ME---------KIPREEV-EAQLAVLGLEPTVVDAITTT------LSLKSIDEIAQRVGE 260
Query: 950 DKPTRKALDEL--YLRIWRIEKNIYIDA-----LMPPIESYHRNLFFQVFSVKEKYPATL 1002
+ K L + + + + DA L +Y+ + F+ F + K+
Sbjct: 261 EHEAVKELRQFFEQVEAYGYGDWVLFDASVVRGL-----AYYTGIVFEGFDREGKF---- 311
Query: 1003 VEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNE 1062
L GGRYD L + P G I++
Sbjct: 312 --RALCG-GGRYDNL---------LTTYGSPTPIPCAGFGFGDCVIVELLQEKRLLPDIP 359
Query: 1063 AGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVI 1122
+V + + ++ L + A + + + + YA V+
Sbjct: 360 HVVDDVVIPF-DESMRPHALAVLRRLRDAGRSADIILD-KKKVVQAFNYADRVGAVRAVL 417
Query: 1123 LTDTGAQKGLVKVRHLDVKKEKEVQRE 1149
+ ++G V+V+ L KE
Sbjct: 418 VAPEEWERGEVQVKMLREGTGKEEGGA 444
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317 | Back alignment and structure |
|---|
Score = 116 bits (294), Expect = 1e-28
Identities = 64/257 (24%), Positives = 112/257 (43%), Gaps = 66/257 (25%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL-KDKSLPVNDRILREVATLSRLQH 413
+ F++L+ LG+G + V NK G + A+K+++L ++ P +RE++ + L+H
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPST--AIREISLMKELKH 62
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+++VR Y DV ENKL +
Sbjct: 63 ENIVRLY-----------------------------------DVIHTENKL-----TLVF 82
Query: 474 EYCPRTLRQVFESY------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
E+ L++ +S + L + Q+++GLA H I+HRDL P N+ +
Sbjct: 83 EFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN 142
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG-TGQVGTYFYTAPEIEQGWPKI 586
R +K+GDFGLA+ AF G+ V+ + +V T +Y AP++ G
Sbjct: 143 KRGQLKLGDFGLAR-----------AF-----GIPVNTFSSEVVTLWYRAPDVLMGSRTY 186
Query: 587 DEKADMYSLGIVFFELW 603
D++S G + E+
Sbjct: 187 STSIDIWSCGCILAEMI 203
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 2e-28
Identities = 67/334 (20%), Positives = 124/334 (37%), Gaps = 86/334 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ +G G G V L + K GR AVK + L+ + + + EV + QH +V
Sbjct: 47 LDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQ--QRRELLFNEVVIMRDYQHFNV 104
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V Y+++ G+ +W + ME+
Sbjct: 105 VEMYKSYLV-------GEELW---------------------------------VLMEFL 124
Query: 477 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
L + ++++A + +++ LA++H QG+IHRD+ ++I +K+
Sbjct: 125 QGGALTDIVSQVRLNEEQIA-TVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLS 183
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
DFG + + + + + VGT ++ APE+ + D++SL
Sbjct: 184 DFGFCAQIS-KDVPKRKSL--------------VGTPYWMAPEVISRSL-YATEVDIWSL 227
Query: 596 GIVFFEL---------WHPFSTAMERQIVLSD---LKQKGELPPSWVAKFSEQESLLRRL 643
GI+ E+ P AM +++ S LK + L R+
Sbjct: 228 GIMVIEMVDGEPPYFSDSPVQ-AM-KRLRDSPPPKLKN----SHKVSPVLRD---FLERM 278
Query: 644 MSPSPSDRPSATELLQ-----DALPPQMEYELLD 672
+ P +R +A ELL P+ L+
Sbjct: 279 LVRDPQERATAQELLDHPFLLQTGLPECLVPLIQ 312
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437 | Back alignment and structure |
|---|
Score = 118 bits (298), Expect = 2e-28
Identities = 69/310 (22%), Positives = 110/310 (35%), Gaps = 72/310 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 411
DFE L+ +G G FG V + K K + +A+K + K + L + E L
Sbjct: 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILN-KWEMLKRAETACFREERDVLVNG 131
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+ + + A F+ LY+
Sbjct: 132 DSKWITTLHYA-FQD---------------------------------------DNNLYL 151
Query: 472 QMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
M+Y TL FE D +E+A ++V + +H +HRD+ P+NI D
Sbjct: 152 VMDYYVGGDLLTLLSKFE--DRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD 209
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
I++ DFG +L +D + VGT Y +PEI Q
Sbjct: 210 MNGHIRLADFGSCL-----KLMEDGTVQSSV---------AVGTPDYISPEILQAMEGGK 255
Query: 588 EK----ADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQ-ES 638
+ D +SLG+ +E+ PF + + K P+ V SE +
Sbjct: 256 GRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKD 315
Query: 639 LLRRLMSPSP 648
L+RRL+
Sbjct: 316 LIRRLICSRE 325
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 3e-28
Identities = 76/339 (22%), Positives = 127/339 (37%), Gaps = 89/339 (26%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+E + LG G FG V KNK G A K I K + + + E+ L+ H ++
Sbjct: 21 WEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSE--EELEDYIVEIEILATCDHPYI 78
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V+ A++ +W I +E+C
Sbjct: 79 VKLLGAYYH-------DGKLW---------------------------------IMIEFC 98
Query: 477 PR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
P + + D + + RQ++E L +H + IIHRDL N+ DI++
Sbjct: 99 PGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRL 158
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI----EQGWPKIDEKA 590
DFG++ + L + +F +GT ++ APE+ D KA
Sbjct: 159 ADFGVSAKNL-KTLQKRDSF--------------IGTPYWMAPEVVMCETMKDTPYDYKA 203
Query: 591 DMYSLGIVFFEL---------WHPFSTAMERQIVLSD---LKQKGELPPSWVAKFSEQES 638
D++SLGI E+ +P + +I SD L + W +F +
Sbjct: 204 DIWSLGITLIEMAQIEPPHHELNPMR-VL-LKIAKSDPPTLLTPSK----WSVEFRD--- 254
Query: 639 LLRRLMSPSPSDRPSATELLQ-----DALPPQMEYELLD 672
L+ + +P RPSA +LL+ + EL+
Sbjct: 255 FLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELVA 293
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353 | Back alignment and structure |
|---|
Score = 116 bits (293), Expect = 3e-28
Identities = 85/392 (21%), Positives = 135/392 (34%), Gaps = 98/392 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRLQHQ 414
F+ LG G +G V +K G A+KKI DK L R LRE+ L +H+
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKILKHFKHE 69
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+++ + +F+ +YI E
Sbjct: 70 NIITIFNIQRPDSFENFNE-----------------------------------VYIIQE 94
Query: 475 YCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
L +V S DH + Q + + +HG +IHRDL P+N+ ++
Sbjct: 95 LMQTDLHRVISTQMLSDDHIQ-----YFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNC 149
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
D+K+ DFGLA+ +D+ AA ++ G V T +Y APE+ K
Sbjct: 150 DLKVCDFGLAR-----IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAM 204
Query: 591 DMYSLGIVFFELWH-----------------------PFSTAMERQI----VLSDLKQKG 623
D++S G + EL+ P S R I +K
Sbjct: 205 DVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLP 264
Query: 624 ELPP-SWVAKFSEQES----LLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMM 678
P F LL+R++ P+ R +A E L+ Y L+
Sbjct: 265 MYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEH------PY------LQTY 312
Query: 679 HSSEDTSIYDKVVSSIFDEETLDMKHHAGTLR 710
H D + + S F+ + L+
Sbjct: 313 HDPNDEPEGEPIPPSFFEFDHYKEALTTKDLK 344
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 4e-28
Identities = 72/347 (20%), Positives = 137/347 (39%), Gaps = 88/347 (25%)
Query: 338 SVDSGSPNMSLPSSRYLND----FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK 393
+ DS + ++ L D FE ++ +G+G +G V ++ G+ A+K + +
Sbjct: 3 ASDSPARSLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD 62
Query: 394 SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 452
+ I +E+ L + H+++ YY A+ + D D +W
Sbjct: 63 --EEEE-IKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD-DQLW--------------- 103
Query: 453 SSADVTGQENKLESTYLYIQMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508
+ ME+C L + + ++ +A ++ R+I+ GL+H
Sbjct: 104 ------------------LVMEFCGAGSVTDLIKNTKGNTLKEEWIA-YICREILRGLSH 144
Query: 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568
+H +IHRD+ N+ ++K+ DFG++ L + + F
Sbjct: 145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLD-RTVGRRNTF-------------- 189
Query: 569 VGTYFYTAPEI----EQGWPKIDEKADMYSLGIVFFEL---------WHPFSTAMERQIV 615
+GT ++ APE+ E D K+D++SLGI E+ HP A+ I
Sbjct: 190 IGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR-AL-FLIP 247
Query: 616 LSD---LKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
+ LK W KF + + + S RP+ +L++
Sbjct: 248 RNPAPRLK-----SKKWSKKFQS---FIESCLVKNHSQRPATEQLMK 286
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412 | Back alignment and structure |
|---|
Score = 117 bits (294), Expect = 6e-28
Identities = 69/315 (21%), Positives = 108/315 (34%), Gaps = 75/315 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 411
+DFE L+ +G G F V + K K G+ YA+K + K L + E L
Sbjct: 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMN-KWDMLKRGEVSCFREERDVLVNG 118
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+ + + + A F+ YLY+
Sbjct: 119 DRRWITQLHFA-FQD---------------------------------------ENYLYL 138
Query: 472 QMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
MEY TL F + E+A +IV + +H G +HRD+ P+NI D
Sbjct: 139 VMEYYVGGDLLTLLSKFG--ERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD 196
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPK 585
I++ DFG L+ + + VGT Y +PEI G
Sbjct: 197 RCGHIRLADFGSCLKLRADGTVRSLVA--------------VGTPDYLSPEILQAVGGGP 242
Query: 586 IDEK----ADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQ- 636
D ++LG+ +E+ PF + + K L P E+
Sbjct: 243 GTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEA 302
Query: 637 ESLLRRLMSPSPSDR 651
++RL+ P R
Sbjct: 303 RDFIQRLLC-PPETR 316
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432 | Back alignment and structure |
|---|
Score = 117 bits (295), Expect = 6e-28
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 42/253 (16%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ +G G +G+V L +K ++ A+KK+ + L RILRE+ L+RL+ ++
Sbjct: 28 YIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYI 87
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+R Y D+ ++ L+ LYI +E
Sbjct: 88 IRLY-----------------------------------DLIIPDDLLKFDELYIVLEIA 112
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L+++F++ +E + ++ G IH GIIHRDL P N + +K+ D
Sbjct: 113 DSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCD 172
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDG-------TGQVGTYFYTAPEIEQGWPKIDEK 589
FGLA+ + E+ + T V T +Y APE+ +
Sbjct: 173 FGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKS 232
Query: 590 ADMYSLGIVFFEL 602
D++S G +F EL
Sbjct: 233 IDIWSTGCIFAEL 245
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384 | Back alignment and structure |
|---|
Score = 115 bits (291), Expect = 9e-28
Identities = 70/340 (20%), Positives = 126/340 (37%), Gaps = 103/340 (30%)
Query: 336 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 395
P V + +++ + FE L+ +G G FG V + + + YA+K + K K +
Sbjct: 2 MPPVFDENEDVNF------DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMN-KQKCV 54
Query: 396 PVND--RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAAS 453
N+ + +E+ + L+H +V +W S F +
Sbjct: 55 ERNEVRNVFKELQIMQGLEHPFLVN-----------------LWYS-------FQDE--- 87
Query: 454 SADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFR------------- 500
+++ ++ +L +HL +
Sbjct: 88 -------------EDMFMVVDLLL-------------GGDLRYHLQQNVHFKEETVKLFI 121
Query: 501 -QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTG 559
++V L ++ Q IIHRD+ P+NI D + I DF +A P +T
Sbjct: 122 CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAM-----------LPRETQ 170
Query: 560 GVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF---STAME 611
++ GT Y APE+ + D +SLG+ +EL P+ S+
Sbjct: 171 ITTM-----AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSS 225
Query: 612 RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
++IV + P +W E SLL++L+ P+P R
Sbjct: 226 KEIVHTFETTVVTYPSAWS---QEMVSLLKKLLEPNPDQR 262
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410 | Back alignment and structure |
|---|
Score = 111 bits (280), Expect = 4e-26
Identities = 64/312 (20%), Positives = 112/312 (35%), Gaps = 75/312 (24%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 411
D+E ++ +G G FG V L ++K + YA+K + K + + +D E ++
Sbjct: 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLS-KFEMIKRSDSAFFWEERDIMAFA 126
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
VV+ + A F+ YLY+
Sbjct: 127 NSPWVVQLFYA-FQD---------------------------------------DRYLYM 146
Query: 472 QMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
MEY P + ++ A ++V L IH G IHRD+ P+N+
Sbjct: 147 VMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLL 201
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI---EQGW 583
D +K+ DFG +++++ DT VGT Y +PE+ + G
Sbjct: 202 DKSGHLKLADFGTCM-----KMNKEGMVRCDTA---------VGTPDYISPEVLKSQGGD 247
Query: 584 PKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESL 639
+ D +S+G+ +E+ PF + K L P E ++L
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNL 307
Query: 640 LRRLMSPSPSDR 651
+ ++ R
Sbjct: 308 ICAFLT-DREVR 318
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 5e-26
Identities = 67/381 (17%), Positives = 128/381 (33%), Gaps = 103/381 (27%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ +G G +G V +K G A+KK+ +S R RE+ L +QH++V
Sbjct: 26 YVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENV 85
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ + D Y+ M +
Sbjct: 86 IGLLDVFTPASSLRNFYD----------------------------------FYLVMPFM 111
Query: 477 PRTLRQVFE---SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
L+++ S + +L Q+++GL +IH G++HRDL P N+ + ++K
Sbjct: 112 QTDLQKIMGLKFSEEKIQ-----YLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELK 166
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
I DFGLA+ + TG V T +Y APE+ W ++ D++
Sbjct: 167 ILDFGLAR------------------HADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIW 208
Query: 594 SLGIVFFELW-----------------------HPFSTAMER---QIVLSDLKQKGELPP 627
S+G + E+ P + +++ + S ++ + P
Sbjct: 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPR 268
Query: 628 -SWVAKFSEQES----LLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSE 682
+ F LL +++ R +A + L + E
Sbjct: 269 KDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH------PF------FEPFRDPE 316
Query: 683 DTSIYDKVVSSIFDEETLDMK 703
+ + + + E L +
Sbjct: 317 EETEAQQPFDDSLEHEKLTVD 337
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 5e-26
Identities = 59/260 (22%), Positives = 98/260 (37%), Gaps = 58/260 (22%)
Query: 350 SSRYLNDFEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATL 408
R +E + +G G +G V ++ K GR A+K++R++ + +REVA L
Sbjct: 6 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 65
Query: 409 SRLQ---HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
L+ H +VVR + DV
Sbjct: 66 RHLETFEHPNVVRLF-----------------------------------DVCTVSRTDR 90
Query: 466 STYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
T L + E+ + L + E + Q++ GL +H ++HRDL P N
Sbjct: 91 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 150
Query: 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583
I + IK+ DFGLA+ + + T V T +Y APE+
Sbjct: 151 ILVTSSGQIKLADFGLAR-----------IY-----SFQMALTSVVVTLWYRAPEVLLQ- 193
Query: 584 PKIDEKADMYSLGIVFFELW 603
D++S+G +F E++
Sbjct: 194 SSYATPVDLWSVGCIFAEMF 213
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350 | Back alignment and structure |
|---|
Score = 109 bits (275), Expect = 7e-26
Identities = 77/321 (23%), Positives = 120/321 (37%), Gaps = 103/321 (32%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN--DRILREVATLSRL 411
L+ F+ ++ LG G FG V+L K+K G HYA+K + K K + + + L E L +
Sbjct: 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILD-KQKVVKLKQIEHTLNEKRILQAV 98
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+V+ + S F + ++ LY+
Sbjct: 99 NFPFLVK-----------------LEFS-------FKD----------------NSNLYM 118
Query: 472 QMEYCPRTLRQVFESYDHFDKELAWHLFR--------------QIVEGLAHIHGQGIIHR 517
MEY E+ HL R QIV ++H +I+R
Sbjct: 119 VMEYVA-------------GGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYR 165
Query: 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTA 576
DL P N+ D + I++ DFG AK +K T + GT A
Sbjct: 166 DLKPENLLIDQQGYIQVTDFGFAKRVK-------------------GRTWTLCGTPEALA 206
Query: 577 PEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVA 631
PEI +G+ K D ++LG++ +E+ + PF QI + K P
Sbjct: 207 PEIILSKGYNK---AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSH--- 260
Query: 632 KFSEQ-ESLLRRLMSPSPSDR 651
FS + LLR L+ + R
Sbjct: 261 -FSSDLKDLLRNLLQVDLTKR 280
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 1e-25
Identities = 44/251 (17%), Positives = 89/251 (35%), Gaps = 65/251 (25%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H 413
+D++ ++ LG G + V N + VK ++ K +I RE+ L L+
Sbjct: 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 90
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+++ D+ ++
Sbjct: 91 PNIITLA-----------------------------------DIVKDPVSRTPALVF--- 112
Query: 474 EYCPRT-LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-D 531
E+ T +Q+ Y +I++ L + H GI+HRD+ P+N+ D +
Sbjct: 113 EHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK 169
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+++ D+GLA+F + +V + ++ PE+ + D D
Sbjct: 170 LRLIDWGLAEF----------------YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLD 213
Query: 592 MYSLGIVFFEL 602
M+SLG + +
Sbjct: 214 MWSLGCMLASM 224
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 2e-25
Identities = 60/249 (24%), Positives = 103/249 (41%), Gaps = 55/249 (22%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ +LQP+G G +G V + G A+KK+ +S R RE+ L ++H+
Sbjct: 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 84
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TYLYIQM 473
+V+ DV + L+ T Y+ M
Sbjct: 85 NVIGLL-----------------------------------DVFTPDETLDDFTDFYLVM 109
Query: 474 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
+ L ++ + + ++ L Q+++GL +IH GIIHRDL P N+ + ++K
Sbjct: 110 PFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELK 168
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
I DFGLA+ + TG V T +Y APE+ W + + D++
Sbjct: 169 ILDFGLAR------------------QADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIW 210
Query: 594 SLGIVFFEL 602
S+G + E+
Sbjct: 211 SVGCIMAEM 219
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367 | Back alignment and structure |
|---|
Score = 108 bits (271), Expect = 3e-25
Identities = 58/246 (23%), Positives = 99/246 (40%), Gaps = 53/246 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H++V
Sbjct: 31 YQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENV 90
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ + + D +Y+
Sbjct: 91 IGLLDVFTPARSLEEFND----------------------------------VYLVTHLM 116
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L + + D + + ++ QI+ GL +IH IIHRDL P+N+ + ++KI D
Sbjct: 117 GADLNNIVKCQKLTDDHVQFLIY-QILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILD 175
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FGLA+ + + TG V T +Y APEI W ++ D++S+G
Sbjct: 176 FGLAR------------------HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG 217
Query: 597 IVFFEL 602
+ EL
Sbjct: 218 CIMAEL 223
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318 | Back alignment and structure |
|---|
Score = 106 bits (267), Expect = 4e-25
Identities = 77/321 (23%), Positives = 125/321 (38%), Gaps = 103/321 (32%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 411
L DF+ L+ LG G FG V L +++ +GR+YA+K ++ K+ + + E LS +
Sbjct: 5 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK-KEIVVRLKQVEHTNDERLMLSIV 63
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H ++R MWG+ F + + +++
Sbjct: 64 THPFIIR-----------------MWGT-------FQD----------------AQQIFM 83
Query: 472 QMEYCPRTLRQVFESYDHFDKELAWHLFR--------------QIVEGLAHIHGQGIIHR 517
M+Y EL L + ++ L ++H + II+R
Sbjct: 84 IMDYIE-------------GGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYR 130
Query: 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV-GTYFYTA 576
DL P NI D IKI DFG AK++ D T + GT Y A
Sbjct: 131 DLKPENILLDKNGHIKITDFGFAKYVP-------------------DVTYTLCGTPDYIA 171
Query: 577 PEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVA 631
PE+ + + K D +S GI+ +E+ + PF + + L + PP
Sbjct: 172 PEVVSTKPYNK---SIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPF--- 225
Query: 632 KFSEQ-ESLLRRLMSPSPSDR 651
F+E + LL RL++ S R
Sbjct: 226 -FNEDVKDLLSRLITRDLSQR 245
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364 | Back alignment and structure |
|---|
Score = 107 bits (269), Expect = 4e-25
Identities = 53/246 (21%), Positives = 92/246 (37%), Gaps = 49/246 (19%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ L +G G +G V + L+ A+KKI + R LRE+ L R +H+++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQ-RTLREIKILLRFRHENI 87
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ + +YI +
Sbjct: 88 IGINDIIRAPTIEQMKD-----------------------------------VYIVQDLM 112
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L ++ ++ H + + QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 113 ETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 171
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FGLA+ + T V T +Y APEI + D++S+G
Sbjct: 172 FGLARVADPDHDHTGFL------------TEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 219
Query: 597 IVFFEL 602
+ E+
Sbjct: 220 CILAEM 225
|
| >3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695 | Back alignment and structure |
|---|
Score = 110 bits (277), Expect = 7e-25
Identities = 78/367 (21%), Positives = 124/367 (33%), Gaps = 123/367 (33%)
Query: 319 NQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKL 378
VF + + S + ++F + + ++++ NDF + +G GGFG V C+
Sbjct: 159 GDVFQKFIESDKFTRFCQWKNVELNIHLTM------NDFSVHRIIGRGGFGEVYGCRKAD 212
Query: 379 DGRHYAVKKIRLKDKSLPVND---------RILREVATLSRLQHQHVVRYYQAWFETGVA 429
G+ YA+K L K + + +L V S +V A F T
Sbjct: 213 TGKMYAMKC--LDKKRIKMKQGETLALNERIMLSLV---STGDCPFIVCMSYA-FHT--- 263
Query: 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH 489
L ++
Sbjct: 264 ------------------------------------PDKLSFILDLMN------------ 275
Query: 490 FDKELAWHLFR--------------QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
+L +HL + +I+ GL H+H + +++RDL P NI D ++I
Sbjct: 276 -GGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRIS 334
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSL 595
D GLA ++ VGT+ Y APE+ Q D AD +SL
Sbjct: 335 DLGLACDFSKKK--------PHA---------SVGTHGYMAPEVLQKGVAYDSSADWFSL 377
Query: 596 GIVFFEL---WHPFSTA-------MERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLM 644
G + F+L PF ++R L ELP FS + SLL L+
Sbjct: 378 GCMLFKLLRGHSPFRQHKTKDKHEIDRMT----LTMAVELPD----SFSPELRSLLEGLL 429
Query: 645 SPSPSDR 651
+ R
Sbjct: 430 QRDVNRR 436
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464 | Back alignment and structure |
|---|
Score = 107 bits (268), Expect = 2e-24
Identities = 70/301 (23%), Positives = 121/301 (40%), Gaps = 60/301 (19%)
Query: 308 SKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNM---SLPSSRY--LNDFEELQP 362
S+P+ F Q F +++ S +++ + S + S + L ++ L+P
Sbjct: 10 SEPTLDVKIAFCQGFDKQVDVSYIAKHYNMSKSKVDNQFYSVEVGDSTFTVLKRYQNLKP 69
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQA 422
+G G G V + + R+ A+KK+ ++ R RE+ + + H++++
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLL-- 127
Query: 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TYLYIQMEYCPRTLR 481
+V + LE +Y+ ME L
Sbjct: 128 ---------------------------------NVFTPQKTLEEFQDVYLVMELMDANLC 154
Query: 482 QVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +KI DFGLA+
Sbjct: 155 QVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
Query: 542 FLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFE 601
T + T V T +Y APE+ G E D++S+G + E
Sbjct: 213 -------------TAGTSFMM---TPYVVTRYYRAPEVILGM-GYKENVDIWSVGCIMGE 255
Query: 602 L 602
+
Sbjct: 256 M 256
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371 | Back alignment and structure |
|---|
Score = 105 bits (264), Expect = 2e-24
Identities = 65/250 (26%), Positives = 103/250 (41%), Gaps = 55/250 (22%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
L ++ L+P+G G G V + + R+ A+KK+ ++ R RE+ + + H
Sbjct: 24 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNH 83
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLES-TYLYIQ 472
++++ +V + LE +YI
Sbjct: 84 KNIIGLL-----------------------------------NVFTPQKSLEEFQDVYIV 108
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
ME L QV + D E +L Q++ G+ H+H GIIHRDL P+NI + +
Sbjct: 109 MELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTL 166
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
KI DFGLA+ T G S T V T +Y APE+ G E D+
Sbjct: 167 KILDFGLAR----------------TAGTSFMMTPYVVTRYYRAPEVILGM-GYKENVDI 209
Query: 593 YSLGIVFFEL 602
+S+G + E+
Sbjct: 210 WSVGCIMGEM 219
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 4e-24
Identities = 53/261 (20%), Positives = 84/261 (32%), Gaps = 72/261 (27%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND---------RILREVAT 407
+ + + G +G V + +G A+K++ + R+LRE+
Sbjct: 24 YTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRL 82
Query: 408 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 467
L+ H +++ +
Sbjct: 83 LNHFHHPNILGLRDIFVHFEEPAMHK---------------------------------- 108
Query: 468 YLYIQMEYCPRTLRQVFESY------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTP 521
LY+ E L QV H + I+ GL +H G++HRDL P
Sbjct: 109 -LYLVTELMRTDLAQVIHDQRIVISPQHIQ-----YFMYHILLGLHVLHEAGVVHRDLHP 162
Query: 522 NNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581
NI NDI I DF LA+ + DA T V +Y APE+
Sbjct: 163 GNILLADNNDITICDFNLAR-----EDTADANK-----------THYVTHRWYRAPELVM 206
Query: 582 GWPKIDEKADMYSLGIVFFEL 602
+ + DM+S G V E+
Sbjct: 207 QFKGFTKLVDMWSAGCVMAEM 227
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 4e-24
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 54/257 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQH 415
+E ++ LG G +G V ++ G AVKKI ++ R RE+ L+ L H++
Sbjct: 11 YELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHEN 70
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V +V +N + +Y+ +Y
Sbjct: 71 IVNLL-----------------------------------NVLRADNDRD---VYLVFDY 92
Query: 476 CPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
L V + H ++ Q+++ + ++H G++HRD+ P+NI +A
Sbjct: 93 METDLHAVIRANILEPVHKQ-----YVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECH 147
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG------TGQVGTYFYTAPEIEQGWPK 585
+K+ DFGL++ + + + T V T +Y APEI G K
Sbjct: 148 VKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTK 207
Query: 586 IDEKADMYSLGIVFFEL 602
+ DM+SLG + E+
Sbjct: 208 YTKGIDMWSLGCILGEI 224
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543 | Back alignment and structure |
|---|
Score = 106 bits (266), Expect = 7e-24
Identities = 73/317 (23%), Positives = 112/317 (35%), Gaps = 84/317 (26%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 411
+ F + + LG GGFG V C+ K G+ YA KK+ K + + E L+++
Sbjct: 184 EDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLN-KKRLKKRKGYQGAMVEKKILAKV 242
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+ +V A FET T L +
Sbjct: 243 HSRFIVSLAYA-FET---------------------------------------KTDLCL 262
Query: 472 QMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
M + V E F + A QIV GL H+H + II+RDL P N+
Sbjct: 263 VMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL 322
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586
D +++I D GLA G GT + APE+ G
Sbjct: 323 DDDGNVRISDLGLAV-----------ELKAGQTKTK----GYAGTPGFMAPELLLGEE-Y 366
Query: 587 DEKADMYSLGIVFFEL---WHPF--------STAMERQIVLSDLKQKGELPPSWVAKFS- 634
D D ++LG+ +E+ PF + +++++ L+Q P KFS
Sbjct: 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV----LEQAVTYPD----KFSP 418
Query: 635 EQESLLRRLMSPSPSDR 651
+ L+ P R
Sbjct: 419 ASKDFCEALLQKDPEKR 435
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576 | Back alignment and structure |
|---|
Score = 105 bits (263), Expect = 2e-23
Identities = 70/310 (22%), Positives = 116/310 (37%), Gaps = 73/310 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR--ILREVATLSRL 411
N F + + LG GGFG V C+ + G+ YA KK+ K + L E L ++
Sbjct: 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLE-KKRIKKRKGEAMALNEKQILEKV 241
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+ VV A +ET L +
Sbjct: 242 NSRFVVSLAYA-YET---------------------------------------KDALCL 261
Query: 472 QMEYCP-----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
+ + + + F + A +I GL +H + I++RDL P NI
Sbjct: 262 VLTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILL 319
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586
D I+I D GLA + Q +VGT Y APE+ +
Sbjct: 320 DDHGHIRISDLGLAVHVPEGQ-------TIKG---------RVGTVGYMAPEVVKNERY- 362
Query: 587 DEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQK-GELPPSWVAKFSEQ-ESLLR 641
D ++LG + +E+ PF +++I ++++ E+P + +FS Q SL
Sbjct: 363 TFSPDWWALGCLLYEMIAGQSPF-QQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCS 421
Query: 642 RLMSPSPSDR 651
+L+ P++R
Sbjct: 422 QLLCKDPAER 431
|
| >3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 2e-22
Identities = 83/323 (25%), Positives = 124/323 (38%), Gaps = 102/323 (31%)
Query: 354 LNDFEELQPLGHGGFGHVVLCK---NKLDGRHYAVKKIRLKDKSLPVNDRI--LREVATL 408
+ FE L+ LG G FG V L K + YA+K LK +L V DR+ E L
Sbjct: 23 PSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV--LKKATLKVRDRVRTKMERDIL 80
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
+ H +V+ + A F+T E KL
Sbjct: 81 VEVNHPFIVKLHYA-FQT----------------------------------EGKL---- 101
Query: 469 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFR--------------QIVEGLAHIHGQGI 514
Y+ +++ +L L + ++ L H+H GI
Sbjct: 102 -YLILDFLR-------------GGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGI 147
Query: 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574
I+RDL P NI D IK+ DFGL+K E +D + + GT Y
Sbjct: 148 IYRDLKPENILLDEEGHIKLTDFGLSK----ESIDHEK--KAYS---------FCGTVEY 192
Query: 575 TAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSW 629
APE+ +G + AD +S G++ FE+ PF ++ + LK K +P
Sbjct: 193 MAPEVVNRRGH---TQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMPQF- 248
Query: 630 VAKFS-EQESLLRRLMSPSPSDR 651
S E +SLLR L +P++R
Sbjct: 249 ---LSPEAQSLLRMLFKRNPANR 268
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337 | Back alignment and structure |
|---|
Score = 99.2 bits (248), Expect = 2e-22
Identities = 75/319 (23%), Positives = 117/319 (36%), Gaps = 96/319 (30%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--RILREVATLSRL 411
+NDF+ L+ LG G FG V+L + K GR+YA+K +R K+ + ++ + E L
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILR-KEVIIAKDEVAHTVTESRVLQNT 62
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+H + A F+T L
Sbjct: 63 RHPFLTALKYA-FQT---------------------------------------HDRLCF 82
Query: 472 QMEYCPRTLRQVFESYDHFDKELAWHLFRQ--------------IVEGLAHIHGQGIIHR 517
MEY EL +HL R+ IV L ++H + +++R
Sbjct: 83 VMEYANG-------------GELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYR 129
Query: 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577
D+ N+ D IKI DFGL K E + A T GT Y AP
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCK----EGISDGA--TMKT---------FCGTPEYLAP 174
Query: 578 EI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAK 632
E+ + + D + LG+V +E+ PF ++ L ++ P ++
Sbjct: 175 EVLEDNDY---GRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR-TLSP 230
Query: 633 FSEQESLLRRLMSPSPSDR 651
E +SLL L+ P R
Sbjct: 231 --EAKSLLAGLLKKDPKQR 247
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373 | Back alignment and structure |
|---|
Score = 98.9 bits (247), Expect = 4e-22
Identities = 76/346 (21%), Positives = 128/346 (36%), Gaps = 111/346 (32%)
Query: 336 KPSVDSGSPNMSLPSSRY--LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK 393
P S N+ S+ + +DF L+ +G G FG V+L ++K + YAVK ++ K
Sbjct: 17 PPPAPSQQINLGPSSNPHAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQ-KKA 75
Query: 394 SLPVND--------RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 445
L + +L L ++H +V + + F+T
Sbjct: 76 ILKKKEEKHIMSERNVL-----LKNVKHPFLVGLHFS-FQT------------------- 110
Query: 446 TFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ---- 501
+ LY ++Y EL +HL R+
Sbjct: 111 --------------------ADKLYFVLDYIN-------------GGELFYHLQRERCFL 137
Query: 502 ----------IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD 551
I L ++H I++RDL P NI D++ I + DFGL K E ++ +
Sbjct: 138 EPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCK----ENIEHN 193
Query: 552 AAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPF 606
+ T T GT Y APE+ +Q + D D + LG V +E+ PF
Sbjct: 194 S--TTST---------FCGTPEYLAPEVLHKQPY---DRTVDWWCLGAVLYEMLYGLPPF 239
Query: 607 STAMERQIVLSDLKQKGELPPSWVAKFS-EQESLLRRLMSPSPSDR 651
+ ++ + L + +L P+ + LL L+ + R
Sbjct: 240 YSRNTAEMYDNILNKPLQLKPN----ITNSARHLLEGLLQKDRTKR 281
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446 | Back alignment and structure |
|---|
Score = 99.8 bits (249), Expect = 5e-22
Identities = 81/340 (23%), Positives = 125/340 (36%), Gaps = 98/340 (28%)
Query: 337 PSVDSGSPNMSLPSSRY-----LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 391
PS +SG+ M + ++ +N+FE L+ LG G FG V+L K K GR+YA+K ++ K
Sbjct: 125 PSDNSGAEEMEVSLAKPKHRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILK-K 183
Query: 392 DKSLPVND--RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSN 449
+ + ++ L E L +H + + F+T
Sbjct: 184 EVIVAKDEVAHTLTENRVLQNSRHPFLTALKYS-FQT----------------------- 219
Query: 450 RAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ-------- 501
L MEY EL +HL R+
Sbjct: 220 ----------------HDRLCFVMEYANG-------------GELFFHLSRERVFSEDRA 250
Query: 502 ------IVEGLAHIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF 554
IV L ++H + +++RDL N+ D IKI DFGL K E + A
Sbjct: 251 RFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK----EGIKDGAT- 305
Query: 555 PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAME 611
T GT Y APE+ + D + LG+V +E+ PF
Sbjct: 306 -MKT---------FCGTPEYLAPEVLEDNDY-GRAVDWWGLGVVMYEMMCGRLPFYNQDH 354
Query: 612 RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
++ L ++ P + E +SLL L+ P R
Sbjct: 355 EKLFELILMEEIRFPR-TLGP--EAKSLLSGLLKKDPKQR 391
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327 | Back alignment and structure |
|---|
Score = 96.8 bits (242), Expect = 9e-22
Identities = 79/339 (23%), Positives = 120/339 (35%), Gaps = 105/339 (30%)
Query: 342 GSPNMSLPSSRY---LNDFEELQPLGHGGFGHVVLCK---NKLDGRHYAVKKIRLKDKSL 395
GS S+ FE L+ LG GG+G V + G+ +A+K ++ K +
Sbjct: 1 GSSETSVNRGPEKIRPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK-KAMIV 59
Query: 396 PVND---RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 452
E L ++H +V A F+T
Sbjct: 60 RNAKDTAHTKAERNILEEVKHPFIVDLIYA-FQT-------------------------- 92
Query: 453 SSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ----------- 501
KL Y+ +EY EL L R+
Sbjct: 93 --------GGKL-----YLILEYLS-------------GGELFMQLEREGIFMEDTACFY 126
Query: 502 ---IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDT 558
I L H+H +GII+RDL P NI + + +K+ DFGL K E + T T
Sbjct: 127 LAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCK----ESIHDGT--VTHT 180
Query: 559 GGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQ 613
GT Y APEI G + D +SLG + +++ PF+ ++
Sbjct: 181 ---------FCGTIEYMAPEILMRSGH---NRAVDWWSLGALMYDMLTGAPPFTGENRKK 228
Query: 614 IVLSDLKQKGELPPSWVAKFS-EQESLLRRLMSPSPSDR 651
+ LK K LPP + E LL++L+ + + R
Sbjct: 229 TIDKILKCKLNLPPY----LTQEARDLLKKLLKRNAASR 263
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 2e-21
Identities = 75/345 (21%), Positives = 122/345 (35%), Gaps = 110/345 (31%)
Query: 336 KPSVDSGSPNMSLPSSRY-LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS 394
K S G+ S+R +++FE ++ LG G FG V+L + K G YAVK ++ KD
Sbjct: 3 KESSKEGNGIGVNSSNRLGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK-KDVI 61
Query: 395 LPVND--------RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASST 446
L +D RIL H + + + F+T
Sbjct: 62 LQDDDVECTMTEKRILSLAR-----NHPFLTQLFCC-FQT-------------------- 95
Query: 447 FSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ----- 501
L+ ME+ +L +H+ +
Sbjct: 96 -------------------PDRLFFVMEFVN-------------GGDLMFHIQKSRRFDE 123
Query: 502 ---------IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDA 552
I+ L +H +GII+RDL +N+ D K+ DFG+ K E +
Sbjct: 124 ARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK----EGICNGV 179
Query: 553 AFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFS 607
T T GT Y APEI E + D +++G++ +E+ PF
Sbjct: 180 --TTAT---------FCGTPDYIAPEILQEMLYGP---AVDWWAMGVLLYEMLCGHAPFE 225
Query: 608 TAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 651
E + + L + P E +L+ M+ +P+ R
Sbjct: 226 AENEDDLFEAILNDEVVYPTW----LHEDATGILKSFMTKNPTMR 266
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355 | Back alignment and structure |
|---|
Score = 96.6 bits (241), Expect = 2e-21
Identities = 76/328 (23%), Positives = 123/328 (37%), Gaps = 102/328 (31%)
Query: 354 LNDFEELQPLGHGGFGHVVLCK---NKLDGRHYAVK-----KIRLKDKSLPVNDRILREV 405
+ +FE L+ LG G +G V L + G+ YA+K I K K+ + E
Sbjct: 53 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTT---EHTRTER 109
Query: 406 ATLSRLQHQH-VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKL 464
L ++ +V + A F+T
Sbjct: 110 QVLEHIRQSPFLVTLHYA-FQT-------------------------------------- 130
Query: 465 ESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ--------------IVEGLAHIH 510
T L++ ++Y EL HL ++ IV L H+H
Sbjct: 131 -ETKLHLILDYIN-------------GGELFTHLSQRERFTEHEVQIYVGEIVLALEHLH 176
Query: 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570
GII+RD+ NI D+ + + DFGL+K ++ ++ F G
Sbjct: 177 KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF--------------CG 222
Query: 571 TYFYTAPEIEQGWPKIDEKA-DMYSLGIVFFEL---WHPFSTAMERQIV--LSDLKQKGE 624
T Y AP+I +G +KA D +SLG++ +EL PF+ E+ +S K E
Sbjct: 223 TIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSE 282
Query: 625 LP-PSWVAKFSEQESLLRRLMSPSPSDR 651
P P ++ + L++RL+ P R
Sbjct: 283 PPYPQEMSA--LAKDLIQRLLMKDPKKR 308
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674 | Back alignment and structure |
|---|
Score = 98.9 bits (246), Expect = 3e-21
Identities = 82/394 (20%), Positives = 132/394 (33%), Gaps = 98/394 (24%)
Query: 277 QSTGSLTDALPQIATELYNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWK 336
L Q E +N+ + G + + +F + + + K
Sbjct: 270 AGVDGWFKLLSQEEGEYFNVPV-PPEGSEGNEELRQKFERAKIGQGTKAPEEKTANTISK 328
Query: 337 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 396
+ M L DF L LG G FG V+L + K YAVK ++ KD +
Sbjct: 329 FDNNGNRDRMKL------TDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQ 381
Query: 397 VND--------RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 448
+D R+L + + + + F+T
Sbjct: 382 DDDVECTMVEKRVLALPG-----KPPFLTQLHSC-FQT---------------------- 413
Query: 449 NRAASSADVTGQENKLESTYLYIQMEYCP------RTLRQVFESYDHFDKELAWHLFRQI 502
LY MEY + F + A +I
Sbjct: 414 -----------------MDRLYFVMEYVNGGDLMYHIQQV-----GRFKEPHAVFYAAEI 451
Query: 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 562
GL + +GII+RDL +N+ D+ IKI DFG+ K E + T T
Sbjct: 452 AIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVT--TKT---- 501
Query: 563 VDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLS 617
GT Y APEI Q + K D ++ G++ +E+ PF E ++ S
Sbjct: 502 -----FCGTPDYIAPEIIAYQPYGK---SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQS 553
Query: 618 DLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDR 651
++ P ++K E ++ + LM+ P R
Sbjct: 554 IMEHNVAYPK-SMSK--EAVAICKGLMTKHPGKR 584
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353 | Back alignment and structure |
|---|
Score = 95.4 bits (238), Expect = 4e-21
Identities = 73/323 (22%), Positives = 114/323 (35%), Gaps = 103/323 (31%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--------RILREV 405
L DF L LG G FG V+L + K YAVK ++ KD + +D R+L
Sbjct: 19 LTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK-KDVVIQDDDVECTMVEKRVLALP 77
Query: 406 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
+ + + + F+T
Sbjct: 78 G-----KPPFLTQLHSC-FQT--------------------------------------- 92
Query: 466 STYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ--------------IVEGLAHIHG 511
LY MEY +L +H+ + I GL +
Sbjct: 93 MDRLYFVMEYVN-------------GGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFLQS 139
Query: 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
+GII+RDL +N+ D+ IKI DFG+ K E + T T GT
Sbjct: 140 KGIIYRDLKLDNVMLDSEGHIKIADFGMCK----ENIWDGVT--TKT---------FCGT 184
Query: 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPS 628
Y APEI P + D ++ G++ +E+ PF E ++ S ++ P
Sbjct: 185 PDYIAPEIIAYQPY-GKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK- 242
Query: 629 WVAKFSEQESLLRRLMSPSPSDR 651
++K E ++ + LM+ P R
Sbjct: 243 SMSK--EAVAICKGLMTKHPGKR 263
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286 | Back alignment and structure |
|---|
Score = 91.3 bits (227), Expect = 3e-20
Identities = 39/338 (11%), Positives = 73/338 (21%), Gaps = 100/338 (29%)
Query: 337 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 396
P P + + RY L G + R A+ + +
Sbjct: 17 PDDVQLVPGARIANGRY----RLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPD 72
Query: 397 -VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 455
V L LSR+ V R
Sbjct: 73 DVLQETLSRTLRLSRIDKPGVARVL----------------------------------- 97
Query: 456 DVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514
DV + E+ +L++V ++ A + + H G+
Sbjct: 98 DV-VHTR----AGGLVVAEWIRGGSLQEVADT--SPSPVGAIRAMQSLAAAADAAHRAGV 150
Query: 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574
P+ + D+ +
Sbjct: 151 ALSIDHPSRVRVSIDGDVVLAYPA-----------------------------------T 175
Query: 575 TAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPP---S 628
+ + D+ +G + L P A R + + P
Sbjct: 176 MPDA--------NPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPAD 227
Query: 629 WVAKFSEQ-ESLLRRLMSPSPSDRPSAT--ELLQDALP 663
Q ++ R + R ++T L+Q A
Sbjct: 228 IDRDIPFQISAVAARSVQGDGGIRSASTLLNLMQQATA 265
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345 | Back alignment and structure |
|---|
Score = 92.3 bits (230), Expect = 4e-20
Identities = 75/341 (21%), Positives = 119/341 (34%), Gaps = 107/341 (31%)
Query: 337 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP 396
P ++ P++ + + DF + LG G FG V L + K + +A+K ++ KD L
Sbjct: 1 PELNKERPSLQIKLK--IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALK-KDVVLM 57
Query: 397 VND--------RILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFS 448
+D R+L +H + + F+T
Sbjct: 58 DDDVECTMVEKRVLSLAW-----EHPFLTHMFCT-FQT---------------------- 89
Query: 449 NRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ------- 501
L+ MEY +L +H+
Sbjct: 90 -----------------KENLFFVMEYLN-------------GGDLMYHIQSCHKFDLSR 119
Query: 502 -------IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF 554
I+ GL +H +GI++RDL +NI D IKI DFG+ K E + DA
Sbjct: 120 ATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK----ENMLGDAK- 174
Query: 555 PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL---WHPFSTAME 611
T+T GT Y APEI G + D +S G++ +E+ PF E
Sbjct: 175 -TNT---------FCGTPDYIAPEILLGQKY-NHSVDWWSFGVLLYEMLIGQSPFHGQDE 223
Query: 612 RQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDR 651
++ S P ++ + LL +L P R
Sbjct: 224 EELFHSIRMDNPFYPRW----LEKEAKDLLVKLFVREPEKR 260
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-19
Identities = 65/333 (19%), Positives = 117/333 (35%), Gaps = 114/333 (34%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND--------RILREV 405
L DF+ L+ +G G + V+L + K R YA+K ++ K+ D + +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVK-KELVNDDEDIDWVQTEKHVFEQA 66
Query: 406 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
+ H +V + F+T
Sbjct: 67 S-----NHPFLVGLHSC-FQT--------------------------------------- 81
Query: 466 STYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ--------------IVEGLAHIHG 511
+ L+ +EY +L +H+ RQ I L ++H
Sbjct: 82 ESRLFFVIEYVN-------------GGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHE 128
Query: 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
+GII+RDL +N+ D+ IK+ D+G+ K E L T T GT
Sbjct: 129 RGIIYRDLKLDNVLLDSEGHIKLTDYGMCK----EGLRPGD--TTST---------FCGT 173
Query: 572 YFYTAPEI--EQGWPKIDEKADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQ----- 621
Y APEI + + D ++LG++ FE+ PF + +
Sbjct: 174 PNYIAPEILRGEDY---GFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQV 230
Query: 622 --KGELP-PSWVAKFSEQESLLRRLMSPSPSDR 651
+ ++ P ++ + S+L+ ++ P +R
Sbjct: 231 ILEKQIRIPRSLSV--KAASVLKSFLNKDPKER 261
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326 | Back alignment and structure |
|---|
Score = 90.1 bits (224), Expect = 2e-19
Identities = 74/359 (20%), Positives = 127/359 (35%), Gaps = 92/359 (25%)
Query: 337 PSVDSGSPNMSLPSSRYLNDFEELQP--------LGHGGFGHVVLCK----NKLDGRHYA 384
P+ ++ ++ S+ D + + LG G FG V +C+ G A
Sbjct: 15 PTTENLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVA 74
Query: 385 VKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLAS 444
VKK L+ + RE+ L LQH ++V+Y GV
Sbjct: 75 VKK--LQHSTEEHLRDFEREIEILKSLQHDNIVKYK------GV---------------- 110
Query: 445 STFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQ-VFESYDHFDKELAWHLFRQI 502
+ L + MEY P +LR + + + D QI
Sbjct: 111 ------------CYSAGRR----NLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 154
Query: 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVS 562
+G+ ++ + IHRDL NI + N +KIGDFGL K L D++ + G
Sbjct: 155 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLP---QDKEYYKVKEPGESP 211
Query: 563 VDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQ 621
+ F+ APE + + K +D++S G+V L+ F+ + + ++ +
Sbjct: 212 I---------FWYAPESLTES--KFSVASDVWSFGVV---LYELFTYIEKSKSPPAEFMR 257
Query: 622 KGELPPSWVAKFSEQESLLRR----------------LM----SPSPSDRPSATELLQD 660
LL+ +M + + + RPS +L
Sbjct: 258 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALR 316
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295 | Back alignment and structure |
|---|
Score = 89.3 bits (222), Expect = 2e-19
Identities = 72/328 (21%), Positives = 118/328 (35%), Gaps = 84/328 (25%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
LQ LG G FG V +C+ + AVKK L+ + RE+ L LQH +
Sbjct: 15 LQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKK--LQHSTEEHLRDFEREIEILKSLQHDN 72
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V+Y GV + L + MEY
Sbjct: 73 IVKYK------GV----------------------------CYSAGRR----NLKLIMEY 94
Query: 476 CPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
P +LR + + + D QI +G+ ++ + IHRDL NI + N +K
Sbjct: 95 LPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVK 154
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 592
IGDFGL K L D++ + G + F+ APE + + K +D+
Sbjct: 155 IGDFGLTKVLP---QDKEFFKVKEPGESPI---------FWYAPESLTES--KFSVASDV 200
Query: 593 YSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR---------- 642
+S G+V L+ F+ + + ++ + LL+
Sbjct: 201 WSFGVV---LYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGC 257
Query: 643 ------LM----SPSPSDRPSATELLQD 660
+M + + + RPS +L
Sbjct: 258 PDEIYMIMTECWNNNVNQRPSFRDLALR 285
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405 | Back alignment and structure |
|---|
Score = 91.0 bits (226), Expect = 2e-19
Identities = 52/256 (20%), Positives = 93/256 (36%), Gaps = 69/256 (26%)
Query: 363 LGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 420
+G G +GHV K K D + YA+K+I ++ RE+A L L+H +V+
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG----ISMSACREIALLRELKHPNVISLQ 84
Query: 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTL 480
+ ++ +++ +Y L
Sbjct: 85 KV----------------------------------FLSHADR----KVWLLFDYAEHDL 106
Query: 481 RQVFESYDH---------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
+ + + + + L QI++G+ ++H ++HRDL P NI
Sbjct: 107 WHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGP 166
Query: 532 ----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
+KI D G A+ P D V T++Y APE+ G
Sbjct: 167 ERGRVKIADMGFARLFNS---------PLKPLA---DLDPVVVTFWYRAPELLLGARHYT 214
Query: 588 EKADMYSLGIVFFELW 603
+ D++++G +F EL
Sbjct: 215 KAIDIWAIGCIFAELL 230
|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 Length = 434 | Back alignment and structure |
|---|
Score = 90.3 bits (225), Expect = 4e-19
Identities = 71/463 (15%), Positives = 148/463 (31%), Gaps = 92/463 (19%)
Query: 725 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLL----GDCPQFKRNTV-----KLLTH 772
D ++ ++ + +E + ++ +E + L G+ + +
Sbjct: 19 DMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGE-------ELLQQTYSFVDK 71
Query: 773 GGDLLELSHELRLPFIRWAISNQKSS--FKRYEISSVYRRAIGHSPPN--RY---LQGDF 825
GG + L E +R S + + Y V+R + P RY Q +
Sbjct: 72 GGREVTLIPEATPSTVRMVTSRKDLQRPLRWYSFPKVWR----YEEPQAGRYREHYQFNA 127
Query: 826 DIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAE 885
DI G S +AEV+ + I+ R + +I +N ++E I G+ + V
Sbjct: 128 DIFGSDSPEADAEVIALASSILDRLGLQDIYEIRINSRKIMEEI--IGGMTSSDPFSVFS 185
Query: 886 LLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRG 945
++ + + L+ + E V+ + + + + + +
Sbjct: 186 IIDRYHKISREEF----------VDQLRSAGIGEDGVSMIADL-----CSGTRGIDEMAR 230
Query: 946 ALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFF---------QVFSVKE 996
+ + + + +++ + VF +
Sbjct: 231 ITGKSSEEIARMAAVED---------LLASY--GVKNVRYDFSIVRGLSYYTGIVFEAYD 279
Query: 997 KYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPP-SGVGASLALETII---QHY 1052
+ +L GGRYD L M + VG + I +
Sbjct: 280 RSGQ---FRAILG-GGRYDNLASLM-----------SGESVPAVGFGMGDAVISLLLKRE 324
Query: 1053 PVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYA 1112
V SV +C G E +L E + + + L+ Q +YA
Sbjct: 325 NVQIP----REKKSVYICRVGKINSS-IMNEYSRKLRERGMNVTVEIM-ERGLSAQLKYA 378
Query: 1113 SEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1155
S VI + ++G+V +R++ ++ V +S+V L
Sbjct: 379 SAIGADFAVIFGERDLERGVVTIRNMYTGSQENVGLDSVVEHL 421
|
| >3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} Length = 400 | Back alignment and structure |
|---|
Score = 87.7 bits (218), Expect = 2e-18
Identities = 59/356 (16%), Positives = 116/356 (32%), Gaps = 58/356 (16%)
Query: 768 KLLTHGGDLLELSHELRLPFIRWAISNQKSS---FKRYEISSVYRRAIGHSPP--NRY-- 820
KLL G+ L L ++ P R S+ K + S+VYR +
Sbjct: 70 KLLDQQGNTLVLRPDMTAPIARLVASSLKDRAYPLRLAYQSNVYR----AQQNEGGKPAE 125
Query: 821 -LQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEH 879
Q ++IG +A + EV+ + + + R + + H + A+ +
Sbjct: 126 FEQLGVELIGDGTASADGEVIALMIAALKR-AGLSEFKVAIGHVGYVNALLMDVVGNEQR 184
Query: 880 REKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQA 939
+++ L K V R+ ++ LNL+ +RL + L G A
Sbjct: 185 ADRLRRFLY-------------EKNYVGYREHVKSLNLSTIDKSRLMNL-LSLRGGRA-A 229
Query: 940 LPRLRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSV 994
+ R L + + AL E+ L + + + D + SY+ + F+ +
Sbjct: 230 IEEAR-GLIQTEKGKTALAEMTKLYEVLESYGASEYVKFDLTLVLHMSYYTGVVFEGYG- 287
Query: 995 KEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV 1054
+ L GGRYD LL + P G + ++ +++
Sbjct: 288 -NRLGVP------LCSGGRYDELLSKF-----------HRPAQATGFGVRIDLLVEALNG 329
Query: 1055 DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYE 1110
+ +E + E +EL + + + +
Sbjct: 330 EIISNGHEQ---TCILF--SNERRFEAIELARKKRANGEAVVLQDLAGVTDVDAMS 380
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302 | Back alignment and structure |
|---|
Score = 83.9 bits (208), Expect = 1e-17
Identities = 71/350 (20%), Positives = 125/350 (35%), Gaps = 96/350 (27%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDR-ILREVATLS 409
+ ++ LG G FG V LC+ +G + AVK LK +S + + +E+ L
Sbjct: 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKS--LKPESGGNHIADLKKEIEILR 78
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
L H+++V+Y G+ T +
Sbjct: 79 NLYHENIVKYK------GI----------------------------CTEDGGNG----I 100
Query: 470 YIQMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
+ ME+ P +L++ + + + QI +G+ ++ + +HRDL N+ +
Sbjct: 101 KLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE 160
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKI 586
+ + +KIGDFGL K + + D++ D V F+ APE + Q K
Sbjct: 161 SEHQVKIGDFGLTKAI---ETDKEYYTVKDDRDSPV---------FWYAPECLMQS--KF 206
Query: 587 DEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR---- 642
+D++S G+ EL T + L K P + + L+
Sbjct: 207 YIASDVWSFGVTLHELL----TYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRL 262
Query: 643 ------------LM----SPSPSDRPSATELLQDALPPQMEYELLDNILR 676
LM PS+R S L E + +L+
Sbjct: 263 PCPPNCPDEVYQLMRKCWEFQPSNRTSFQNL----------IEGFEALLK 302
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429 | Back alignment and structure |
|---|
Score = 84.8 bits (210), Expect = 3e-17
Identities = 59/266 (22%), Positives = 91/266 (34%), Gaps = 84/266 (31%)
Query: 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL 411
RY E L+ +G G FG VV + +H A+K +R + + + E+ L L
Sbjct: 98 RY----EVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFH---RQAAEEIRILEHL 150
Query: 412 QHQ------HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
+ Q +V+ + F F N
Sbjct: 151 RKQDKDNTMNVIHMLE-NFT---------------------FRN---------------- 172
Query: 466 STYLYIQMEYCPRTLRQVFE--SYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
++ + E L ++ + + F L I++ L +H IIH DL P N
Sbjct: 173 --HICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPEN 230
Query: 524 IFF--DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY----FYTAP 577
I R+ IK+ DFG + + +V TY FY AP
Sbjct: 231 ILLKQQGRSGIKVIDFGSSCYE----------------------HQRVYTYIQSRFYRAP 268
Query: 578 EIEQGWPKIDEKADMYSLGIVFFELW 603
E+ G DM+SLG + EL
Sbjct: 269 EVILGAR-YGMPIDMWSLGCILAELL 293
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327 | Back alignment and structure |
|---|
Score = 83.2 bits (206), Expect = 4e-17
Identities = 80/352 (22%), Positives = 122/352 (34%), Gaps = 99/352 (28%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
+ LG G FG V LC+ G + AVK+ L+ RE+ L L
Sbjct: 28 ISQLGKGNFGSVELCRYDPLGDNTGALVAVKQ--LQHSGPDQQRDFQREIQILKALHSDF 85
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V+Y GV+ G L + MEY
Sbjct: 86 IVKYR------GVSYGPGRQS--------------------------------LRLVMEY 107
Query: 476 CPR-TLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
P LR + D QI +G+ ++ + +HRDL NI ++ +K
Sbjct: 108 LPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVK 167
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 592
I DFGLAK L LD+D + G + F+ APE + ++D+
Sbjct: 168 IADFGLAKLL---PLDKDYYVVREPGQSPI---------FWYAPESLSDN--IFSRQSDV 213
Query: 593 YSLGIVFFELW-----------------HPFSTAMERQIVLSDLKQKGELP-----PSWV 630
+S G+V +EL+ +L L++ LP P+ V
Sbjct: 214 WSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPPACPAEV 273
Query: 631 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSE 682
+ L++ +PSP DRPS + L LD + E
Sbjct: 274 HE------LMKLCWAPSPQDRPSFSALGPQ----------LDMLWSGSRGCE 309
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373 | Back alignment and structure |
|---|
Score = 83.6 bits (207), Expect = 4e-17
Identities = 53/276 (19%), Positives = 91/276 (32%), Gaps = 82/276 (29%)
Query: 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT 407
+RY ++ LG G F V L K+ ++ H A+K +R + E+
Sbjct: 16 YKDARY----ILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKV---YTEAAEDEIKL 68
Query: 408 LSRLQ-----------HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSAD 456
L R+ H+++ F + G
Sbjct: 69 LQRVNDADNTKEDSMGANHILKLLD-HF-----NHKGP---------------------- 100
Query: 457 VTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQ-G 513
++ + E L + + Y+H + +Q++ GL ++H + G
Sbjct: 101 --------NGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCG 152
Query: 514 IIHRDLTPNNIFFD------ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 567
IIH D+ P N+ + IKI D G A + T
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHY------------------TN 194
Query: 568 QVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 603
+ T Y +PE+ G P AD++S + FEL
Sbjct: 195 SIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELI 229
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377 | Back alignment and structure |
|---|
Score = 81.9 bits (203), Expect = 2e-16
Identities = 65/323 (20%), Positives = 112/323 (34%), Gaps = 87/323 (26%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
D + +G G FG V + + D AVK R + + + L+E L + H
Sbjct: 114 EDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCR-ETLPPDLKAKFLQEARILKQYSHP 172
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++VR GV T ++ +YI ME
Sbjct: 173 NIVRLI------GV----------------------------CTQKQ------PIYIVME 192
Query: 475 YCPR-----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
LR + + G+ ++ + IHRDL N +
Sbjct: 193 LVQGGDFLTFLR---TEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEK 249
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPK 585
N +KI DFG+++ D + G Q +TAPE + G +
Sbjct: 250 NVLKISDFGMSREEA------------DGVYAASGGLRQ----VPVKWTAPEALNYG--R 291
Query: 586 IDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQ 636
++D++S GI+ +E + P+ + Q +++ G LP P V +
Sbjct: 292 YSSESDVWSFGILLWETFSLGASPYP-NLSNQQTREFVEKGGRLPCPELCPDAVFR---- 346
Query: 637 ESLLRRLMSPSPSDRPSATELLQ 659
L+ + + P RPS + + Q
Sbjct: 347 --LMEQCWAYEPGQRPSFSTIYQ 367
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318 | Back alignment and structure |
|---|
Score = 80.8 bits (200), Expect = 2e-16
Identities = 76/328 (23%), Positives = 114/328 (34%), Gaps = 86/328 (26%)
Query: 360 LQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQHQ 414
++ LG G FG V L N G AVK LK + P + +E+ L L H+
Sbjct: 36 IRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKA--LKADAGPQHRSGWKQEIDILRTLYHE 93
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
H+++Y G + G + L + ME
Sbjct: 94 HIIKYK------GCCEDAGAAS--------------------------------LQLVME 115
Query: 475 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
Y P +LR + +L +QI EG+A++H Q IHRDL N+ D +K
Sbjct: 116 YVPLGSLRDYLPRHSIGLAQL-LLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVK 174
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 592
IGDFGLAK + + + G V F+ APE +++ K +D+
Sbjct: 175 IGDFGLAKAVP---EGHEYYRVREDGDSPV---------FWYAPECLKEY--KFYYASDV 220
Query: 593 YSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR---------- 642
+S G+ +EL T + + LL R
Sbjct: 221 WSFGVTLYELL----THCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKC 276
Query: 643 ------LM----SPSPSDRPSATELLQD 660
LM S RP+ L+
Sbjct: 277 PAEVYHLMKNCWETEASFRPTFENLIPI 304
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A Length = 336 | Back alignment and structure |
|---|
Score = 78.8 bits (193), Expect = 1e-15
Identities = 51/331 (15%), Positives = 93/331 (28%), Gaps = 44/331 (13%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDR------ILREVATL 408
+ + +G G FG V A+K I ++ L IL E+
Sbjct: 20 EKLQRCEKIGEGVFGEVFQTIAD--HTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIIS 77
Query: 409 SRLQ---------HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 459
L + + G W N SA+
Sbjct: 78 KELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLLKAW--------DHYNSTKGSANDRP 129
Query: 460 QENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRD 518
K + ++ ++ E+ L Q+ A + Q+ LA HRD
Sbjct: 130 DFFKDDQLFIVLEFEFGGIDLEQMRTKL--SSLATAKSILHQLTASLAVAEASLRFEHRD 187
Query: 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578
L N+ + K+ K + + T V +
Sbjct: 188 LHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVSMDED 247
Query: 579 IEQGWPKIDEKADMYSL----GIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFS 634
+ G D + D+Y L + +HP+S + + + ++
Sbjct: 248 LFTG--DGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCNTPAM 305
Query: 635 EQ-----ESLLRRLMSPSPSDRPSATELLQD 660
+Q + R +++ S SAT+LL
Sbjct: 306 KQIKRKIQEFHRTMLNFS-----SATDLLCQ 331
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382 | Back alignment and structure |
|---|
Score = 79.4 bits (196), Expect = 1e-15
Identities = 55/263 (20%), Positives = 86/263 (32%), Gaps = 82/263 (31%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ-- 414
+E +G G FG VV ++++ A+K I+ K L ++ EV L +
Sbjct: 56 YEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL---NQAQIEVRLLELMNKHDT 112
Query: 415 ----HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
++V + F F N +L
Sbjct: 113 EMKYYIVHLKR-HFM---------------------FRN------------------HLC 132
Query: 471 IQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQ--GIIHRDLTPNNIFF 526
+ E L + + + L +Q+ L + IIH DL P NI
Sbjct: 133 LVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILL 192
Query: 527 --DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY----FYTAPEIE 580
R+ IKI DFG + L ++ Y FY +PE+
Sbjct: 193 CNPKRSAIKIVDFGSSCQL----------------------GQRIYQYIQSRFYRSPEVL 230
Query: 581 QGWPKIDEKADMYSLGIVFFELW 603
G P D DM+SLG + E+
Sbjct: 231 LGMP-YDLAIDMWSLGCILVEMH 252
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291 | Back alignment and structure |
|---|
Score = 75.7 bits (187), Expect = 6e-15
Identities = 73/337 (21%), Positives = 117/337 (34%), Gaps = 100/337 (29%)
Query: 363 LGHGGFGHVVLCKNKLDGRHY-----AVKKIRLKDKSLP-VNDRILREVATLSRLQHQHV 416
LG G FG V + + D AVK ++ S P D +REV + L H+++
Sbjct: 26 LGDGSFGVV--RRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+R Y GV V + + E
Sbjct: 84 IRLY------GV----------------------------VLTPP-------MKMVTELA 102
Query: 477 PR-----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
P LR + HF Q+ EG+ ++ + IHRDL N+ R+
Sbjct: 103 PLGSLLDRLR---KHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDL 159
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 590
+KIGDFGL + L + D + V + APE ++ +
Sbjct: 160 VKIGDFGLMRALP---QNDDHYVMQEHRKVPF---------AWCAPESLKTR--TFSHAS 205
Query: 591 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGE-LP-----PSWVAKFSEQESLL 640
D + G+ +E++ P+ + +L + ++GE LP P +
Sbjct: 206 DTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDI---------- 254
Query: 641 RRLM----SPSPSDRPSATEL---LQDALPPQMEYEL 670
+M + P DRP+ L L +A P M E
Sbjct: 255 YNVMVQCWAHKPEDRPTFVALRDFLLEAQPTDMRAEF 291
|
| >3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} Length = 373 | Back alignment and structure |
|---|
Score = 77.0 bits (190), Expect = 6e-15
Identities = 63/353 (17%), Positives = 98/353 (27%), Gaps = 56/353 (15%)
Query: 725 DTELRDYVVQVTKEMFRQHCAKHLEIEP-------MYLLGDCPQFKRNTVKLLTHGGDLL 777
+ R V + + L P+ R+ ++L GGD +
Sbjct: 36 FAKRRRAVETRLLSFVEDAGYE--PVTSGLFEYVDTLLRARSPESSRDWIRLFDGGGDAV 93
Query: 778 ELSHELRLPFIRWAISNQKSS---FKRYEISSVYRR----AIGHSPPNRY---LQGDFDI 827
L E+ R A + + VYRR A + Q +
Sbjct: 94 ALRPEMTPSIARMAAPRVAAGRTPIRWCYCERVYRRTDDPASLSWASGKAAESTQVGIER 153
Query: 828 IGG-ASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAEL 886
IG AS + +VL++ + I ++H L+ + GI A
Sbjct: 154 IGEEASVDVDMDVLRLLHEASAAA-GVRHHRIVVSHARLVPRLLDALGISASLSRAFLAC 212
Query: 887 LAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGA 946
L Q E LL L +AL R
Sbjct: 213 LTSGN--YVQFRELWQLHAAKDVDLLANLLTWSPAERDAAKRSREASDRELEALLRDAVD 270
Query: 947 LPADKPTRKALDEL-----YLRIWRI-EKNIYIDALMPPIE----SYHRNLFFQVFSVKE 996
A R A L L + + D Y+ L F++F+
Sbjct: 271 PRAAADVRDAWRYLCRLAEALHDSGLASDVVTFD----LALHRELDYYTGLVFEMFA--P 324
Query: 997 KYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETII 1049
A +A GGRYD LL + P VG + +E ++
Sbjct: 325 GVGAP------IAQGGRYDELLAQF---------GAGAP--AVGFAFEVERVM 360
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327 | Back alignment and structure |
|---|
Score = 76.1 bits (188), Expect = 7e-15
Identities = 63/342 (18%), Positives = 114/342 (33%), Gaps = 98/342 (28%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSR 410
+F++++ LG G FG V +G A+K++R + S N IL E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMAS 73
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
+ + HV R G+ +
Sbjct: 74 VDNPHVCRLL------GI----------------------------CLTST-------VQ 92
Query: 471 IQMEYCPR-TLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
+ + P L V E D+ + + QI +G+ ++ + ++HRDL N+
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKID 587
+KI DFGLAK L ++ + + G V + + A E I
Sbjct: 153 PQHVKITDFGLAKLLG----AEEKEYHAEGGKVPI---------KWMALESILHR--IYT 197
Query: 588 EKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQES 638
++D++S G+ +EL P+ + + S L++ LP
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPPICTID--------- 247
Query: 639 LLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILR 676
+ +M RP EL+ + R
Sbjct: 248 -VYMIMRKCWMIDADSRPKFRELI----------IEFSKMAR 278
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 74.9 bits (185), Expect = 2e-14
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 45/192 (23%)
Query: 504 EGLAHIHGQG---IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG 560
GLA++H IIHRD+ NI D + +GDFGLAK
Sbjct: 142 RGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKL-----------MDYKDTH 190
Query: 561 VSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL------WHPFSTAMERQI 614
V+ T GT + APE K EK D++ G++ EL + A + +
Sbjct: 191 VT---TAVRGTIGHIAPEYLS-TGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDV 246
Query: 615 VLSD----LKQKGELP----PSWVAKFSEQESLLRRLM-------SPSPSDRPSATELLQ 659
+L D L ++ +L + ++E + +L+ SP +RP +E+++
Sbjct: 247 MLLDWVKGLLKEKKLEALVDVDLQGNYKDEE--VEQLIQVALLCTQSSPMERPKMSEVVR 304
Query: 660 ----DALPPQME 667
D L + E
Sbjct: 305 MLEGDGLAERWE 316
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326 | Back alignment and structure |
|---|
Score = 54.1 bits (131), Expect = 1e-07
Identities = 23/66 (34%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDR-ILREVATLSRLQ 412
++F LG GGFG V K +L DG AVK RLK++ + EV +S
Sbjct: 30 DNFSNKNILGRGGFGKVY--KGRLADGTLVAVK--RLKEERTQGGELQFQTEVEMISMAV 85
Query: 413 HQHVVR 418
H++++R
Sbjct: 86 HRNLLR 91
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345 | Back alignment and structure |
|---|
Score = 74.8 bits (184), Expect = 2e-14
Identities = 45/280 (16%), Positives = 92/280 (32%), Gaps = 56/280 (20%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 420
+ +G GGFG + L A ++++ + + E+ R+ +
Sbjct: 43 KKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENG---PLFSELKFYQRVAKKD---CI 96
Query: 421 QAWFETGVADFDG-DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 479
+ W E D+ G +GSG +Y ++ ME
Sbjct: 97 KKWIERKQLDYLGIPLFYGSGLTEFK-------------------GRSYRFMVMERLGID 137
Query: 480 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND--IKIGDF 537
L+++ F K L ++++ L +IH +H D+ N+ +N + + D+
Sbjct: 138 LQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADY 197
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA----PEIEQGWPKIDEKADMY 593
GL+ + + + G GT +T+ + ++D+
Sbjct: 198 GLSYRYCPNGNHKQ--YQEN------PRKGHNGTIEFTSLDAHKGVALSR-----RSDVE 244
Query: 594 SLGIVFFEL------WH-----PFSTAMERQIVLSDLKQK 622
LG W P + + +L +L Q
Sbjct: 245 ILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQS 284
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495 | Back alignment and structure |
|---|
Score = 76.0 bits (187), Expect = 3e-14
Identities = 69/357 (19%), Positives = 124/357 (34%), Gaps = 111/357 (31%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
D LG G +G V K AVK LK+ ++ V + L+E A + ++H
Sbjct: 220 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEE-FLKEAAVMKEIKHP 276
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+ GV T YI E
Sbjct: 277 NLVQLL------GV----------------------------CT------REPPFYIITE 296
Query: 475 YCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
+ LR+ + + ++ QI + ++ + IHR+L N
Sbjct: 297 FMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGEN 354
Query: 530 NDIKIGDFGLAKFLKLEQ--LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKI 586
+ +K+ DFGL++ + + A FP +TAPE + K
Sbjct: 355 HLVKVADFGLSRLMTGDTYTAHAGAKFP----------------IKWTAPESLAYN--KF 396
Query: 587 DEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQE 637
K+D+++ G++ +E+ P+ ++ V L++ + P V +
Sbjct: 397 SIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRMERPEGCPEKVYE----- 450
Query: 638 SLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKV 690
LM +PSDRPS E+ Q + + + ++SI D+V
Sbjct: 451 -----LMRACWQWNPSDRPSFAEIHQA----------FETMFQ------ESSISDEV 486
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327 | Back alignment and structure |
|---|
Score = 73.9 bits (182), Expect = 4e-14
Identities = 69/367 (18%), Positives = 131/367 (35%), Gaps = 82/367 (22%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSR 410
+F++++ LG G FG V +G A+K++R + S N IL E ++
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELR-EATSPKANKEILDEAYVMAS 73
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
+ + HV R G+ +
Sbjct: 74 VDNPHVCRLL------GI----------------------------CLTST-------VQ 92
Query: 471 IQMEYCPR-TLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
+ + P L V E D+ + + QI +G+ ++ + ++HRDL N+
Sbjct: 93 LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT 152
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKID 587
+KI DFGLAK L ++ + + G V + + A E I
Sbjct: 153 PQHVKITDFGLAKLLG----AEEKEYHAEGGKVPIK---------WMALESILHR--IYT 197
Query: 588 EKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL 643
++D++S G+ +EL P+ + + S L++ LP + + +
Sbjct: 198 HQSDVWSYGVTVWELMTFGSKPYD-GIPASEISSILEKGERLPQPPICTID-----VYMI 251
Query: 644 M----SPSPSDRPSATELLQD----ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIF 695
M RP EL+ + A PQ + + + S D++ Y ++
Sbjct: 252 MVKCWMIDADSRPKFRELIIEFSKMARDPQRYLVIQGDERMHLPSPTDSNFYRALMDEED 311
Query: 696 DEETLDM 702
++ +D
Sbjct: 312 MDDVVDA 318
|
| >1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3 Length = 137 | Back alignment and structure |
|---|
Score = 69.3 bits (169), Expect = 6e-14
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
+ E++ V L V+C P YP P++ + KGL+ + L L++ A G V
Sbjct: 56 LAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC--GEV 113
Query: 61 MIFNLVEAAQEFLSE 75
MIF L Q FLSE
Sbjct: 114 MIFELAHHVQSFLSE 128
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 6e-14
Identities = 43/186 (23%), Positives = 76/186 (40%), Gaps = 47/186 (25%)
Query: 493 ELAWHLFRQ--------------IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
+L +H+ RQ I L ++H +GII+RDL +N+ D+ IK+ D+G
Sbjct: 139 DLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 198
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI--EQGWPKIDEKADMYSLG 596
+ K E L T T GT Y APEI + + D ++LG
Sbjct: 199 MCK----EGLRPGD--TTST---------FCGTPNYIAPEILRGEDY---GFSVDWWALG 240
Query: 597 IVFFEL---WHPFSTAMERQIVLSDLKQ-------KGELP-PSWVAKFSEQESLLRRLMS 645
++ FE+ PF + + + ++ P ++ + S+L+ ++
Sbjct: 241 VLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSLSV--KAASVLKSFLN 298
Query: 646 PSPSDR 651
P +R
Sbjct: 299 KDPKER 304
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396 | Back alignment and structure |
|---|
Score = 43.1 bits (102), Expect = 4e-04
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD 392
L DF+ L+ +G G + V+L + K R YA++ ++ K+
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVK-KE 88
|
| >2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 128 | Back alignment and structure |
|---|
Score = 68.1 bits (166), Expect = 1e-13
Identities = 30/76 (39%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 2 GYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVM 61
G D V L YP + P +I ++ L +D ++L LL QA N G VM
Sbjct: 49 GENDETVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENL--GMVM 106
Query: 62 IFNLVEAAQEFLSEIV 77
IF LV A QE L+EIV
Sbjct: 107 IFTLVTAVQEKLNEIV 122
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325 | Back alignment and structure |
|---|
Score = 72.7 bits (179), Expect = 1e-13
Identities = 68/340 (20%), Positives = 121/340 (35%), Gaps = 91/340 (26%)
Query: 363 LGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 419
+G G G V + ++ G+ A+K ++ + L E + + + H +++R
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALK-AGYTERQRRDFLSEASIMGQFDHPNIIRL 115
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT 479
GV VT I EY
Sbjct: 116 E------GV----------------------------VTRGRL------AMIVTEYMENG 135
Query: 480 -----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
LR F + R + G+ ++ G +HRDL N+ D+ K+
Sbjct: 136 SLDTFLRT---HDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKV 192
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMY 593
DFGL++ L + D DAA+ T G + + +TAPE I +D++
Sbjct: 193 SDFGLSRVL---EDDPDAAYTTTGGKIPIR---------WTAPEAIAFR--TFSSASDVW 238
Query: 594 SLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM----S 645
S G+V +E+ P+ M + V+S +++ LP + L +LM
Sbjct: 239 SFGVVMWEVLAYGERPYW-NMTNRDVISSVEEGYRLPAPMGCPHA-----LHQLMLDCWH 292
Query: 646 PSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTS 685
+ RP +++ +LD ++R S T+
Sbjct: 293 KDRAQRPRFSQI----------VSVLDALIRSPESLRATA 322
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 1e-13
Identities = 49/252 (19%), Positives = 88/252 (34%), Gaps = 69/252 (27%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ LG G FG V K + AVK ++ + + D +L E + +L + ++
Sbjct: 23 KELGSGNFGTV--KKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
VR G+ + + ME
Sbjct: 81 VRMI------GI----------------------------CEAES-------WMLVMEMA 99
Query: 477 PR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIG 535
L + + H + L Q+ G+ ++ +HRDL N+ ++ KI
Sbjct: 100 ELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKIS 159
Query: 536 DFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEKAD 591
DFGL+K L + D++ Q + + APE I K K+D
Sbjct: 160 DFGLSKAL---RADENYY------------KAQTHGKWPVKWYAPECINYY--KFSSKSD 202
Query: 592 MYSLGIVFFELW 603
++S G++ +E +
Sbjct: 203 VWSFGVLMWEAF 214
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 71.8 bits (177), Expect = 2e-13
Identities = 33/98 (33%), Positives = 46/98 (46%), Gaps = 15/98 (15%)
Query: 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564
G+ +H IHRD+ NI D KI DFGLA+ + +V
Sbjct: 145 GINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARAS-------------EKFAQTVM 191
Query: 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFEL 602
+ VGT Y APE +G +I K+D+YS G+V E+
Sbjct: 192 TSRIVGTTAYMAPEALRG--EITPKSDIYSFGVVLLEI 227
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307 | Back alignment and structure |
|---|
Score = 47.5 bits (114), Expect = 1e-05
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Query: 363 LGHGGFGHVVLCKNKLDGRHYAVKK--IRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
+G GGFG V K ++ AVKK + + + + +E+ +++ QH+++V
Sbjct: 39 MGEGGFGVVY--KGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVE 94
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 71.9 bits (177), Expect = 2e-13
Identities = 47/176 (26%), Positives = 72/176 (40%), Gaps = 37/176 (21%)
Query: 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG-VSV 563
GL ++H + IIHRD+ NI D KI DFG++K +S
Sbjct: 151 GLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISK-----------KGTELDQTHLS- 198
Query: 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMER-QIVLSD- 618
T GT Y PE ++ EK+D+YS G+V FE+ ++ R + L++
Sbjct: 199 --TVVKGTLGYIDPEYFI-KGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEW 255
Query: 619 ---LKQKGELP----PSWVAKFSEQESLLRRLM-------SPSPSDRPSATELLQD 660
G+L P+ K + LR+ + S DRPS ++L
Sbjct: 256 AVESHNNGQLEQIVDPNLADKIRPES--LRKFGDTAVKCLALSSEDRPSMGDVLWK 309
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321 | Back alignment and structure |
|---|
Score = 49.9 bits (120), Expect = 2e-06
Identities = 29/103 (28%), Positives = 44/103 (42%), Gaps = 15/103 (14%)
Query: 327 VSSRVSQFWKPSVDSGSPNMSLPSSRYL----------NDFEELQPLGHGGFGHVVLCKN 376
+ S+ S+ D+ S + +P Y N+F+ +GHG FG V K
Sbjct: 1 MGSKYSKATNSINDALSSSYLVPFESYRVPLVDLEEATNNFDHKFLIGHGVFGKVY--KG 58
Query: 377 KL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
L DG A+K R +S + E+ TLS +H H+V
Sbjct: 59 VLRDGAKVALK--RRTPESSQGIEEFETEIETLSFCRHPHLVS 99
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452 | Back alignment and structure |
|---|
Score = 72.9 bits (179), Expect = 2e-13
Identities = 78/382 (20%), Positives = 130/382 (34%), Gaps = 106/382 (27%)
Query: 322 FHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL---QPLGHGGFGHVVLCKNKL 378
++ K + S L + E L LG G FG V
Sbjct: 148 YYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEV--WMGTW 205
Query: 379 DGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437
+G A+K LK ++ L+E + +L+H+ +V+ Y V
Sbjct: 206 NGTTRVAIKT--LKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY------AV--------- 247
Query: 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-----LRQVFESYDHFDK 492
V+ + +YI EY + L+ Y +
Sbjct: 248 -------------------VSEE-------PIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 281
Query: 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ--LDQ 550
+ QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q
Sbjct: 282 LVDM--AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 339
Query: 551 DAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HP 605
A FP +TAPE G + K+D++S GI+ EL P
Sbjct: 340 GAKFP----------------IKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVP 381
Query: 606 FSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATE 656
+ M + VL +++ +P P + LM P +RP+
Sbjct: 382 YP-GMVNREVLDQVERGYRMPCPPECPESLHD----------LMCQCWRKEPEERPTFEY 430
Query: 657 L---LQDALP-PQMEYELLDNI 674
L L+D + +Y+ +N+
Sbjct: 431 LQAFLEDYFTSTEPQYQPGENL 452
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323 | Back alignment and structure |
|---|
Score = 71.6 bits (176), Expect = 2e-13
Identities = 61/353 (17%), Positives = 104/353 (29%), Gaps = 102/353 (28%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQHQ 414
+ LG G FG V + K + + AVK LK + +D LRE A + H
Sbjct: 28 GRMLGKGEFGSVREAQLKQEDGSFVKVAVKM--LKADIIASSDIEEFLREAACMKEFDHP 85
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
HV + GV K + +
Sbjct: 86 HVAKLV------GV----------------------------SLRSRAKGRLPIPMVILP 111
Query: 475 YCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
+ R ++ + L I G+ ++ + IHRDL N
Sbjct: 112 FMKHGDLHAFLLASRIGENPFNLPLQTLV-RFMVDIACGMEYLSSRNFIHRDLAARNCML 170
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPK 585
+ + DFGL++ + D + V + A E +
Sbjct: 171 AEDMTVCVADFGLSRKIY----SGDYYRQGCASKLPVK---------WLALESLADN--L 215
Query: 586 IDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGEL------PPSWVAKFSE 635
+D+++ G+ +E+ P++ +E + + L L
Sbjct: 216 YTVHSDVWAFGVTMWEIMTRGQTPYA-GIENAEIYNYLIGGNRLKQPPECMEE------- 267
Query: 636 QESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDT 684
+ LM S P RPS T L + L+NIL + +
Sbjct: 268 ----VYDLMYQCWSADPKQRPSFTCLRME----------LENILGHLSVLSTS 306
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 3e-13
Identities = 70/334 (20%), Positives = 121/334 (36%), Gaps = 95/334 (28%)
Query: 363 LGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 419
+G G FG V + KL + A+K ++ + L E + + + H +++R
Sbjct: 53 VGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 478
GV VT + + I EY
Sbjct: 112 E------GV----------------------------VTKSKP------VMIVTEYMENG 131
Query: 479 TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDF 537
+L +D F + R I G+ ++ G +HRDL NI ++ K+ DF
Sbjct: 132 SLDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDF 191
Query: 538 GLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLG 596
GL + L + D +AA+ T G + + +T+PE I K +D++S G
Sbjct: 192 GLGRVL---EDDPEAAYTTRGGKIPIR---------WTSPEAIAYR--KFTSASDVWSYG 237
Query: 597 IVFFELWH----PFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLM--- 644
IV +E+ P+ M Q V+ + + LP P + L +LM
Sbjct: 238 IVLWEVMSYGERPYW-EMSNQDVIKAVDEGYRLPPPMDCP----------AALYQLMLDC 286
Query: 645 -SPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
++RP ++ +LD ++R
Sbjct: 287 WQKDRNNRPKFEQI----------VSILDKLIRN 310
|
| >3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297 | Back alignment and structure |
|---|
Score = 70.7 bits (174), Expect = 3e-13
Identities = 66/343 (19%), Positives = 105/343 (30%), Gaps = 118/343 (34%)
Query: 360 LQPLGHGGFGHVVLC--KNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ LG G FG V L N + AVK LKD +L RE L+ LQH+
Sbjct: 20 KRELGEGAFGKVFLAECYNLSPTKDKMLVAVKA--LKDPTLAARKDFQREAELLTNLQHE 77
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
H+V++Y GV + L + E
Sbjct: 78 HIVKFY------GV----------------------------CG------DGDPLIMVFE 97
Query: 475 YCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQGIIHR 517
Y R A QI G+ ++ Q +HR
Sbjct: 98 YMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHR 157
Query: 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQD-------AAFPTDTGGVSVDGTGQVG 570
DL N A +KIGDFG+++ + D P +
Sbjct: 158 DLATRNCLVGANLLVKIGDFGMSRDV----YSTDYYRVGGHTMLP-----IR-------- 200
Query: 571 TYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGEL 625
+ PE I K ++D++S G++ +E++ P+ + V+ + Q L
Sbjct: 201 ---WMPPESIMYR--KFTTESDVWSFGVILWEIFTYGKQPWF-QLSNTEVIECITQGRVL 254
Query: 626 P-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 659
P + +M P R + E+ +
Sbjct: 255 ERPRVCPKE----------VYDVMLGCWQREPQQRLNIKEIYK 287
|
| >1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* Length = 275 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 6e-13
Identities = 38/260 (14%), Positives = 74/260 (28%), Gaps = 49/260 (18%)
Query: 768 KLLTHGGDLLELSHELRLPFIRWAISNQKSS-FKRYEISSVYRRAIGHSPPNRYLQGDFD 826
L G+L + + + S K + VYR + Q +
Sbjct: 39 FFLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYSGSD--LVAEYQLGLE 96
Query: 827 IIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAEL 886
+ S EVL++ ++ + F + + H + E + I + EKV L
Sbjct: 97 KVPRNSLDDSLEVLEIIVESASE-FFEGPVIVEIGHTGVYEDL--LKEIPKDLHEKVLNL 153
Query: 887 LAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGA 946
+ +K + L + + V ++ R +
Sbjct: 154 I-------------DTKNLAEIEFLSHMKKIDLSRVEKI------------IEDSIYRRS 188
Query: 947 ---LPADKPTRKALDEL-----YLRIWRIEKNIYID-ALMPPIESYHRNLFFQVFSVKEK 997
L ++L +L+ ++ ID L I + L F ++
Sbjct: 189 PEHLKTMDLPLSVREDLLSASSFLQEKFPTVSVEIDLTLARTI-EEYCGLIFTIYDTSSS 247
Query: 998 YPATLVEGTLLAVGGRYDYL 1017
+A GG Y
Sbjct: 248 RL--------VAAGGEYTVN 259
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278 | Back alignment and structure |
|---|
Score = 69.5 bits (171), Expect = 6e-13
Identities = 63/342 (18%), Positives = 115/342 (33%), Gaps = 107/342 (31%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ + LQ +G G FG V G AVK +K+ + L E + +++L+H
Sbjct: 21 KELKLLQTIGKGEFGDV--MLGDYRGNKVAVKC--IKNDATA--QAFLAEASVMTQLRHS 74
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+ GV + ++ LYI E
Sbjct: 75 NLVQLL------GV----------------------------IVEEKG-----GLYIVTE 95
Query: 475 YCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
Y + LR + + E + ++ G +HRDL N+
Sbjct: 96 YMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED 153
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDE 588
N K+ DFGL K + P +TAPE + + K
Sbjct: 154 NVAKVSDFGLTK--EASSTQDTGKLP----------------VKWTAPEALREK--KFST 193
Query: 589 KADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESL 639
K+D++S GI+ +E++ P+ + + V+ +++ ++ P
Sbjct: 194 KSDVWSFGILLWEIYSFGRVPYP-RIPLKDVVPRVEKGYKMDAPDGCPPA---------- 242
Query: 640 LRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
+ +M + RPS +L E L++I
Sbjct: 243 VYEVMKNCWHLDAAMRPSFLQLR----------EQLEHIKTH 274
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322 | Back alignment and structure |
|---|
Score = 69.6 bits (171), Expect = 1e-12
Identities = 73/396 (18%), Positives = 130/396 (32%), Gaps = 111/396 (28%)
Query: 341 SGSPNMSLPSSRYLNDFEEL--------QPLGHGGFGHVVLC--KNKLDGRHY---AVKK 387
S +P + Y+ D E+ + LG G FG V K + A+K
Sbjct: 3 SVNPEYFSAADVYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKT 62
Query: 388 IRLKDKSLPVNDRI--LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 445
+ + + + +RI L E + + HVVR GV
Sbjct: 63 --VNEAA-SMRERIEFLNEASVMKEFNCHHVVRLL------GV----------------- 96
Query: 446 TFSNRAASSADVTGQENKLESTYLYIQMEYCP--------RTLRQVFESYDHFDKELAWH 497
V+ + + ME R+LR +
Sbjct: 97 -----------VS------QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSK 139
Query: 498 LF---RQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAF 554
+ +I +G+A+++ +HRDL N +KIGDFG+ + + + D
Sbjct: 140 MIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY----ETDYYR 195
Query: 555 PTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTA 609
G + V + +PE ++ G +D++S G+V +E+ P+
Sbjct: 196 KGGKGLLPVR---------WMSPESLKDG--VFTTYSDVWSFGVVLWEIATLAEQPYQ-G 243
Query: 610 MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQ 665
+ + VL + + G L + L LM +P RPS E+
Sbjct: 244 LSNEQVLRFVMEGGLLDKP--DNCPDM---LFELMRMCWQYNPKMRPSFLEI-------- 290
Query: 666 MEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLD 701
+ + + S Y + + + E LD
Sbjct: 291 --ISSIKEEME--PGFREVSFYYSEENKLPEPEELD 322
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333 | Back alignment and structure |
|---|
Score = 69.7 bits (171), Expect = 1e-12
Identities = 62/322 (19%), Positives = 108/322 (33%), Gaps = 96/322 (29%)
Query: 363 LGHGGFGHVVLCKNKLDGRHY------AVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+G G FG V K L A+K ++ + L E + + H ++
Sbjct: 52 IGAGEFGEV--YKGMLKTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+R GV ++ + + I EY
Sbjct: 109 IRLE------GV----------------------------ISKYKP------MMIITEYM 128
Query: 477 PRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
LR+ F + R I G+ ++ +HRDL NI ++
Sbjct: 129 ENGALDKFLRE---KDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLV 185
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 590
K+ DFGL++ L + D +A + T G + + +TAPE I K +
Sbjct: 186 CKVSDFGLSRVL---EDDPEATYTTSGGKIPIR---------WTAPEAISYR--KFTSAS 231
Query: 591 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLR 641
D++S GIV +E+ P+ + V+ + LP P S +
Sbjct: 232 DVWSFGIVMWEVMTYGERPYW-ELSNHEVMKAINDGFRLPTPMDCP----------SAIY 280
Query: 642 RLM----SPSPSDRPSATELLQ 659
+LM + RP +++
Sbjct: 281 QLMMQCWQQERARRPKFADIVS 302
|
| >2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A Length = 128 | Back alignment and structure |
|---|
Score = 64.9 bits (158), Expect = 1e-12
Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
+ V L+++ YP++ P++ I +GL+ +L +L A + G
Sbjct: 52 EDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTA 109
Query: 61 MIFNLVEAAQEFLSEI 76
M++ L+E +E LS
Sbjct: 110 MLYELIEKGKEILSGP 125
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656 | Back alignment and structure |
|---|
Score = 71.0 bits (174), Expect = 1e-12
Identities = 71/394 (18%), Positives = 128/394 (32%), Gaps = 91/394 (23%)
Query: 301 ERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL 360
++ + A + Q VS + + +D + Y E +
Sbjct: 333 QKEGERALPSIPKLANNEKQGVRSHTVSVSETDDYAEIIDEEDTYTMPSTRDYEIQRERI 392
Query: 361 ---QPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ +G G FG V A+K + S V ++ L+E T+ + H
Sbjct: 393 ELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHP 451
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
H+V+ GV +T ++I ME
Sbjct: 452 HIVKLI------GV----------------------------ITENP-------VWIIME 470
Query: 475 YCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
C LR + D Q+ LA++ + +HRD+ N+ + + +
Sbjct: 471 LCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCV 530
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKAD 591
K+GDFGL+++ ++ + G + + + APE I + +D
Sbjct: 531 KLGDFGLSRY-----MEDSTYYKASKGKLPI---------KWMAPESINFR--RFTSASD 574
Query: 592 MYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM--- 644
++ G+ +E+ PF ++ V+ ++ LP L LM
Sbjct: 575 VWMFGVCMWEILMHGVKPFQ-GVKNNDVIGRIENGERLPMP-----PNCPPTLYSLMTKC 628
Query: 645 -SPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
+ PS RP TEL L IL
Sbjct: 629 WAYDPSRRPRFTEL----------KAQLSTILEE 652
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339 | Back alignment and structure |
|---|
Score = 69.2 bits (170), Expect = 2e-12
Identities = 69/365 (18%), Positives = 113/365 (30%), Gaps = 111/365 (30%)
Query: 357 FEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ- 414
+E + LG G FG VV C + K GRH AVK ++ D+ + E+ L L
Sbjct: 16 YEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDR---YCEAARSEIQVLEHLNTTD 72
Query: 415 -----HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
V+ + WF + G ++
Sbjct: 73 PNSTFRCVQMLE-WF-----EHHG----------------------------------HI 92
Query: 470 YIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
I E + + F + + QI + + +H + H DL P NI F
Sbjct: 93 CIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFV 152
Query: 528 -------------------ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568
DIK+ DFG A + +
Sbjct: 153 QSDYTEAYNPKIKRDERTLINPDIKVVDFG------------SATYDDEH---------- 190
Query: 569 VGTY----FYTAPEI--EQGWPKIDEKADMYSLGIVFFELW--HP-FSTAMERQIVLSDL 619
T Y APE+ GW + D++S+G + E + F T ++ +
Sbjct: 191 HSTLVSTRHYRAPEVILALGW---SQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMME 247
Query: 620 KQKGELPPSWVAK------FSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDN 673
+ G LP + K F S + L + L +E+E L +
Sbjct: 248 RILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFD 307
Query: 674 ILRMM 678
+++ M
Sbjct: 308 LIQKM 312
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535 | Back alignment and structure |
|---|
Score = 70.3 bits (172), Expect = 2e-12
Identities = 78/382 (20%), Positives = 130/382 (34%), Gaps = 106/382 (27%)
Query: 322 FHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYLNDFEEL---QPLGHGGFGHVVLCKNKL 378
++ K + S L + E L LG G FG V
Sbjct: 231 YYSKHADGLCHRLTTVCPTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEV--WMGTW 288
Query: 379 DGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMW 437
+G A+K LK ++ L+E + +L+H+ +V+ Y V
Sbjct: 289 NGTTRVAIKT--LKPGTMSPEA-FLQEAQVMKKLRHEKLVQLY------AV--------- 330
Query: 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRT-----LRQVFESYDHFDK 492
V+ + +YI EY + L+ Y +
Sbjct: 331 -------------------VSEE-------PIYIVTEYMSKGSLLDFLKGETGKYLRLPQ 364
Query: 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQ--LDQ 550
+ QI G+A++ +HRDL NI K+ DFGLA+ ++ + Q
Sbjct: 365 LVDM--AAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 422
Query: 551 DAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HP 605
A FP +TAPE G + K+D++S GI+ EL P
Sbjct: 423 GAKFP----------------IKWTAPEAALYG--RFTIKSDVWSFGILLTELTTKGRVP 464
Query: 606 FSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATE 656
+ M + VL +++ +P P + LM P +RP+
Sbjct: 465 Y-PGMVNREVLDQVERGYRMPCPPECPESLHD----------LMCQCWRKEPEERPTFEY 513
Query: 657 L---LQDALP-PQMEYELLDNI 674
L L+D + +Y+ +N+
Sbjct: 514 LQAFLEDYFTSTEPQYQPGENL 535
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268 | Back alignment and structure |
|---|
Score = 67.6 bits (166), Expect = 2e-12
Identities = 66/320 (20%), Positives = 113/320 (35%), Gaps = 95/320 (29%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
L+ LG G FG V K G++ AVK +K+ S+ ++ +E T+ +L H +V+
Sbjct: 13 LKELGSGQFGVV--KLGKWKGQYDVAVKM--IKEGSMSEDE-FFQEAQTMMKLSHPKLVK 67
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
+Y GV + + +YI EY
Sbjct: 68 FY------GV----------------------------CSKEYP------IYIVTEYISN 87
Query: 479 -TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L S+ + + + EG+A + IHRDL N D +K+ D
Sbjct: 88 GCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSD 147
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEKADM 592
FG+ +++ D VGT F ++APE K K+D+
Sbjct: 148 FGMTRYVL----DDQY-------------VSSVGTKFPVKWSAPEVFHYF--KYSSKSDV 188
Query: 593 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRL 643
++ GI+ +E++ P+ V+ + Q L + ++
Sbjct: 189 WAFGILMWEVFSLGKMPY-DLYTNSEVVLKVSQGHRLYRPHLASDT----------IYQI 237
Query: 644 M----SPSPSDRPSATELLQ 659
M P RP+ +LL
Sbjct: 238 MYSCWHELPEKRPTFQQLLS 257
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 2e-12
Identities = 60/321 (18%), Positives = 104/321 (32%), Gaps = 97/321 (30%)
Query: 363 LGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
LG G FG V + R A+K ++ + + ++RE + +L + ++VR
Sbjct: 18 LGCGNFGSV--RQGVYRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
GV + L + ME
Sbjct: 75 LI------GV----------------------------CQAEA-------LMLVMEMAGG 93
Query: 479 -----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
L + L Q+ G+ ++ + +HRDL N+ R+ K
Sbjct: 94 GPLHKFLV---GKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAK 150
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGG-VSVDGTGQVGTYFYTAPE-IEQGWPKIDEKAD 591
I DFGL+K L D+ + + G + + APE I K ++D
Sbjct: 151 ISDFGLSKALG----ADDSYYTARSAGKWPL---------KWYAPECINFR--KFSSRSD 195
Query: 592 MYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRR 642
++S G+ +E P+ M+ V++ ++Q + P L
Sbjct: 196 VWSYGVTMWEALSYGQKPYK-KMKGPEVMAFIEQGKRMECPPECP----------PELYA 244
Query: 643 LM----SPSPSDRPSATELLQ 659
LM DRP + Q
Sbjct: 245 LMSDCWIYKWEDRPDFLTVEQ 265
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313 | Back alignment and structure |
|---|
Score = 68.0 bits (167), Expect = 3e-12
Identities = 66/352 (18%), Positives = 107/352 (30%), Gaps = 110/352 (31%)
Query: 360 LQPLGHGGFGHVVLCK-NKLDGRHY----AVKKIRLKDKSLPVNDRI--LREVATLSRL- 411
+ LG G FG VV L AVK LK + +R + E+ LS L
Sbjct: 28 GKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKM--LKPSAHL-TEREALMSELKVLSYLG 84
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H ++V G T +
Sbjct: 85 NHMNIVNLL------GA----------------------------CTIGG------PTLV 104
Query: 472 QMEYCP--------RTLRQVFESYDHFDKELAWHLF-----------RQIVEGLAHIHGQ 512
EYC R R F + Q+ +G+A + +
Sbjct: 105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK 164
Query: 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQV 569
IHRDL NI KI DFGLA+ +K + + +A P
Sbjct: 165 NCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLP-------------- 210
Query: 570 GTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGE 624
+ APE I ++D++S GI +EL+ P+ +K+
Sbjct: 211 --VKWMAPESIFNC--VYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFR 266
Query: 625 LP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATEL---LQDALPPQMEY 668
+ P + + E + +M P RP+ ++ ++ + +
Sbjct: 267 MLSP----EHAPAE--MYDIMKTCWDADPLKRPTFKQIVQLIEKQISESTNH 312
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360 | Back alignment and structure |
|---|
Score = 68.5 bits (168), Expect = 3e-12
Identities = 51/266 (19%), Positives = 93/266 (34%), Gaps = 68/266 (25%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ-- 414
F ++ +G G FG V+LC++ + ++YAVK +R K E L ++Q+
Sbjct: 37 FLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYT---RSAKIEADILKKIQNDDI 93
Query: 415 ---HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
++V+Y+ F + ++ +
Sbjct: 94 NNNNIVKYHG-KF-----MYYD----------------------------------HMCL 113
Query: 472 QMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
E +L ++ ++ F E +I++ L ++ + H DL P NI
Sbjct: 114 IFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILL--- 170
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTG------GVSVDGTGQVGTY----FYTAPEI 579
+D + + TG G + + G+ Y APE+
Sbjct: 171 DDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEV 230
Query: 580 --EQGWPKIDEKADMYSLGIVFFELW 603
GW D +DM+S G V EL+
Sbjct: 231 ILNLGW---DVSSDMWSFGCVLAELY 253
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 3e-12
Identities = 66/351 (18%), Positives = 120/351 (34%), Gaps = 105/351 (29%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
D LG G +G V K AVK LK+ ++ V + L+E A + ++H
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKT--LKEDTMEVEE-FLKEAAVMKEIKHP 69
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+ GV T + YI E
Sbjct: 70 NLVQLL------GV----------------------------CTREP------PFYIITE 89
Query: 475 YCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
+ LR+ + + ++ QI + ++ + IHRDL N
Sbjct: 90 FMTYGNLLDYLRE--CNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGEN 147
Query: 530 NDIKIGDFGLAKFLKLEQ--LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKI 586
+ +K+ DFGL++ + + A FP +TAPE + K
Sbjct: 148 HLVKVADFGLSRLMTGDTYTAHAGAKFP----------------IKWTAPESLAYN--KF 189
Query: 587 DEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQE 637
K+D+++ G++ +E+ P+ ++ V L++ + P
Sbjct: 190 SIKSDVWAFGVLLWEIATYGMSPYP-GIDLSQVYELLEKDYRMERPEGCP---------- 238
Query: 638 SLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDT 684
+ LM +PSDRPS E+ Q + + + S++
Sbjct: 239 EKVYELMRACWQWNPSDRPSFAEIHQA----------FETMFQESSISDEV 279
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613 | Back alignment and structure |
|---|
Score = 69.6 bits (170), Expect = 3e-12
Identities = 73/472 (15%), Positives = 138/472 (29%), Gaps = 103/472 (21%)
Query: 234 NNDGGDTEIDRLESFSFASLGQDQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATEL 293
+ G I E F +L Q ++ D ++ L S+ S
Sbjct: 215 QDKAGKYCIP--EGTKFDTLWQLVEYLKLKADGLIYCLKEACPNSSASNASGAAAPTLPA 272
Query: 294 YNLGIFSERGRDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRY 353
+ + + R + K + P +
Sbjct: 273 HPSTLTHPQRRIDTLNSDGYTPEPARITSPDKPRPMPMDT-SVFESPFSDPEELKDKKLF 331
Query: 354 LNDFEEL---QPLGHGGFGHVVLCKNKLDGRHY--AVKKIRLKDKSLPVNDRILREVATL 408
L L LG G FG V ++ + A+K ++ + + ++RE +
Sbjct: 332 LKRDNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIM 390
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
+L + ++VR GV +
Sbjct: 391 HQLDNPYIVRLI------GV----------------------------CQAEA------- 409
Query: 469 LYIQMEYCPR-TLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
L + ME L + + L Q+ G+ ++ + +HR+L N+
Sbjct: 410 LMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLL 469
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGG-VSVDGTGQVGTYFYTAPE-IEQGWP 584
R+ KI DFGL+K L D+ + + G + + APE I
Sbjct: 470 VNRHYAKISDFGLSKALG----ADDSYYTARSAGKWPL---------KWYAPECINFR-- 514
Query: 585 KIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSE 635
K ++D++S G+ +E P+ M+ V++ ++Q + P
Sbjct: 515 KFSSRSDVWSYGVTMWEALSYGQKPYK-KMKGPEVMAFIEQGKRMECPPECP-------- 565
Query: 636 QESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSED 683
L LM DRP + + + + S +
Sbjct: 566 --PELYALMSDCWIYKWEDRPDFLTV----------EQRMRACYYSLASKVE 605
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450 | Back alignment and structure |
|---|
Score = 68.9 bits (169), Expect = 4e-12
Identities = 52/255 (20%), Positives = 89/255 (34%), Gaps = 73/255 (28%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ + LQ +G G FG V G AVK +K+ + L E + +++L+H
Sbjct: 193 KELKLLQTIGKGEFGDV--MLGDYRGNKVAVK--CIKNDATA--QAFLAEASVMTQLRHS 246
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V+ GV + ++ LYI E
Sbjct: 247 NLVQLL------GV----------------------------IVEEK-----GGLYIVTE 267
Query: 475 YCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
Y + LR + + E + ++ G +HRDL N+
Sbjct: 268 YMAKGSLVDYLRS--RGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSED 325
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDE 588
N K+ DFGL K + P +TAPE + + K
Sbjct: 326 NVAKVSDFGLTK--EASSTQDTGKLP----------------VKWTAPEALREK--KFST 365
Query: 589 KADMYSLGIVFFELW 603
K+D++S GI+ +E++
Sbjct: 366 KSDVWSFGILLWEIY 380
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283 | Back alignment and structure |
|---|
Score = 67.2 bits (165), Expect = 4e-12
Identities = 58/338 (17%), Positives = 116/338 (34%), Gaps = 105/338 (31%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
L+ LG G FG V K G++ A+K +K+ S+ ++ + E + L H+ +V+
Sbjct: 29 LKELGTGQFGVV--KYGKWRGQYDVAIKM--IKEGSMSEDE-FIEEAKVMMNLSHEKLVQ 83
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
Y GV T Q ++I EY
Sbjct: 84 LY------GV----------------------------CTKQR------PIFIITEYMAN 103
Query: 479 -TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L H F + + + + E + ++ + +HRDL N + + +K+ D
Sbjct: 104 GCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSD 163
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEKADM 592
FGL++++ ++ T VG+ F ++ PE + K K+D+
Sbjct: 164 FGLSRYVLDDEY-----------------TSSVGSKFPVRWSPPEVLMYS--KFSSKSDI 204
Query: 593 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRL 643
++ G++ +E++ P+ + Q L + +
Sbjct: 205 WAFGVLMWEIYSLGKMPYE-RFTNSETAEHIAQGLRLYRPHLAS----------EKVYTI 253
Query: 644 M----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
M +RP+ LL + +++
Sbjct: 254 MYSCWHEKADERPTFKILL----------SNILDVMDE 281
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 4e-12
Identities = 68/349 (19%), Positives = 122/349 (34%), Gaps = 106/349 (30%)
Query: 360 LQPLGHGGFGHVVLCK----NKLDGRHY-AVKKIRLKDKSLPVNDRI--LREVATLSRL- 411
+ LG G FG VV K D AVK LK + +++ + E+ +S L
Sbjct: 51 GKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKM--LKSTAHA-DEKEALMSELKIMSHLG 107
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
QH+++V G T + +
Sbjct: 108 QHENIVNLL------GA----------------------------CTHGG------PVLV 127
Query: 472 QMEYCP--------RTLRQVFESYDHFDKELAWHLFR-------QIVEGLAHIHGQGIIH 516
EYC R +V E+ F + R Q+ +G+A + + IH
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIH 187
Query: 517 RDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQVGTYF 573
RD+ N+ + KIGDFGLA+ + + + +A P V
Sbjct: 188 RDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP-----VK----------- 231
Query: 574 YTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-P 627
+ APE I ++D++S GI+ +E++ +P+ + +K ++ P
Sbjct: 232 WMAPESIFDC--VYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQP 289
Query: 628 SWVAKFSEQESLLRRLM----SPSPSDRPSATEL---LQDALPPQMEYE 669
F+ + + +M + P+ RP+ ++ LQ+
Sbjct: 290 ----AFAPKN--IYSIMQACWALEPTHRPTFQQICSFLQEQAQEDRRER 332
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267 | Back alignment and structure |
|---|
Score = 66.5 bits (163), Expect = 6e-12
Identities = 59/320 (18%), Positives = 109/320 (34%), Gaps = 95/320 (29%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
+Q +G G FG V + A+K +++ ++ D + E + +L H +V+
Sbjct: 13 VQEIGSGQFGLV--HLGYWLNKDKVAIKT--IREGAMSEED-FIEEAEVMMKLSHPKLVQ 67
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
Y GV Q + + E+
Sbjct: 68 LY------GV----------------------------CLEQA------PICLVTEFMEH 87
Query: 479 -TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L + F E + + EG+A++ +IHRDL N IK+ D
Sbjct: 88 GCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSD 147
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEKADM 592
FG+ +F+ +Q T GT F + +PE + K+D+
Sbjct: 148 FGMTRFVLDDQY-----------------TSSTGTKFPVKWASPEVFSFS--RYSSKSDV 188
Query: 593 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRL 643
+S G++ +E++ P+ V+ D+ L + + ++
Sbjct: 189 WSFGVLMWEVFSEGKIPYE-NRSNSEVVEDISTGFRLYKPRLASTH----------VYQI 237
Query: 644 M----SPSPSDRPSATELLQ 659
M P DRP+ + LL+
Sbjct: 238 MNHCWRERPEDRPAFSRLLR 257
|
| >2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 128 | Back alignment and structure |
|---|
Score = 62.9 bits (153), Expect = 6e-12
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 2 GYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVM 61
G+ D D+ L+ YP P + I E LT++ + L +QA S M
Sbjct: 50 GFMDADIPLELVFHLPVNYPSCLPGISINSE-QLTRAQCVTVKEKLLEQAESLL--SEPM 106
Query: 62 IFNLVEAAQEFLSEIV 77
+ LV Q+ L I+
Sbjct: 107 VHELVLWIQQNLRHIL 122
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355 | Back alignment and structure |
|---|
Score = 67.7 bits (166), Expect = 6e-12
Identities = 69/368 (18%), Positives = 119/368 (32%), Gaps = 115/368 (31%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQ- 414
+E + LG G FG VV C + G+ A+K IR K + E+ L +++ +
Sbjct: 21 YEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGK---YREAARLEINVLKKIKEKD 77
Query: 415 -----HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
V WF +F G ++
Sbjct: 78 KENKFLCVLMSD-WF-----NFHG----------------------------------HM 97
Query: 470 YIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF- 526
I E + + + + + H+ Q+ L +H + H DL P NI F
Sbjct: 98 CIAFELLGKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFV 157
Query: 527 ------------------DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568
I++ DFG A F +
Sbjct: 158 NSEFETLYNEHKSCEEKSVKNTSIRVADFG------------SATFDHEH---------- 195
Query: 569 VGTY----FYTAPEI--EQGWPKIDEKADMYSLGIVFFELW--HP-FSTAMERQIVLSDL 619
T Y PE+ E GW + D++S+G + FE + F T R+ ++
Sbjct: 196 HTTIVATRHYRPPEVILELGW---AQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMME 252
Query: 620 KQKGELPPSWV-----AKFSEQESLLRRLMSPS-----PSDRPSATELLQDALPPQMEYE 669
K G +P + K+ + L+ S + +P + +LQD+L ++
Sbjct: 253 KILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFD 312
Query: 670 LLDNILRM 677
L+ +L
Sbjct: 313 LMRRMLEF 320
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 8e-12
Identities = 64/340 (18%), Positives = 112/340 (32%), Gaps = 104/340 (30%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ +G G FG V A+K + S V ++ L+E T+ + H H+
Sbjct: 20 GRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQFDHPHI 78
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V+ GV +T ++I ME C
Sbjct: 79 VKLI------GV----------------------------ITENP-------VWIIMELC 97
Query: 477 PR-----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
L+ D Q+ LA++ + +HRD+ N+ + +
Sbjct: 98 TLGELRSFLQ---VRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDC 154
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKA 590
+K+GDFGL+++ ++ + G + + + APE I + +
Sbjct: 155 VKLGDFGLSRY-----MEDSTYYKASKGKLPI---------KWMAPESINFR--RFTSAS 198
Query: 591 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLR 641
D++ G+ +E+ PF ++ V+ ++ LP P L
Sbjct: 199 DVWMFGVCMWEILMHGVKPFQ-GVKNNDVIGRIENGERLPMPPNCP----------PTLY 247
Query: 642 RLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
LM + PS RP TEL L IL
Sbjct: 248 SLMTKCWAYDPSRRPRFTEL----------KAQLSTILEE 277
|
| >2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae} Length = 138 | Back alignment and structure |
|---|
Score = 62.8 bits (152), Expect = 9e-12
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Query: 4 EDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIF 63
E ++ S L P YPY P+++ + + S L + N++ G+ +IF
Sbjct: 58 EPVESSITLHFAMTPMYPYTAPEIEFKNVQNVMDSQLQMLKSEFKKIHNTS--RGQEIIF 115
Query: 64 NLVEAAQEFLSEIV 77
+ QE L E
Sbjct: 116 EITSFTQEKLDEFQ 129
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325 | Back alignment and structure |
|---|
Score = 66.6 bits (163), Expect = 1e-11
Identities = 63/368 (17%), Positives = 117/368 (31%), Gaps = 95/368 (25%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLP-VNDRILREVATLSRLQHQH 415
+ LG G FG V +G +K ++DKS + + + L H H
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKV--IEDKSGRQSFQAVTDHMLAIGSLDHAH 76
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+VR G+ G L + +Y
Sbjct: 77 IVRLL------GL----------------------------CPGSS-------LQLVTQY 95
Query: 476 CPR-TLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
P +L V + +L + QI +G+ ++ G++HR+L N+ + + ++
Sbjct: 96 LPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQ 155
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADM 592
+ DFG+A L D + + A E I G K ++D+
Sbjct: 156 VADFGVADLLP----PDDKQLLYSEAKTPIK---------WMALESIHFG--KYTHQSDV 200
Query: 593 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLLRRL 643
+S G+ +EL P++ + V L++ L + +
Sbjct: 201 WSYGVTVWELMTFGAEPYA-GLRLAEVPDLLEKGERLAQPQICTID----------VYMV 249
Query: 644 M----SPSPSDRPSATEL---LQDALPPQMEYELLDNILRM--MHSSEDTSIYDKVVSSI 694
M + RP+ EL Y ++ E + +K + +
Sbjct: 250 MVKCWMIDENIRPTFKELANEFTRMARDPPRYLVIKRESGPGIAPGPEPHGLTNKKLEEV 309
Query: 695 FDEETLDM 702
E LD+
Sbjct: 310 ELEPELDL 317
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281 | Back alignment and structure |
|---|
Score = 66.1 bits (162), Expect = 1e-11
Identities = 68/343 (19%), Positives = 120/343 (34%), Gaps = 110/343 (32%)
Query: 360 LQPLGHGGFGHV---VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ LG G FG V V +K + + AVK + KD +L ++ + E + L H H+
Sbjct: 17 NRILGEGFFGEVYEGVYTNHKGEKINVAVKTCK-KDCTLDNKEKFMSEAVIMKNLDHPHI 75
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
V+ G+ + + +I ME
Sbjct: 76 VKLI------GI----------------------------IEEEP-------TWIIMELY 94
Query: 477 PR-----TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
P L + + QI + +A++ +HRD+ NI +
Sbjct: 95 PYGELGHYLE---RNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPEC 151
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKID 587
+K+GDFGL+++++ D+D T + +PE I +
Sbjct: 152 VKLGDFGLSRYIE----DEDY-------------YKASVTRLPIKWMSPESINFR--RFT 192
Query: 588 EKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQES 638
+D++ + +E+ PF +E + V+ L++ LP P
Sbjct: 193 TASDVWMFAVCMWEILSFGKQPFF-WLENKDVIGVLEKGDRLPKPDLCP----------P 241
Query: 639 LLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
+L LM PSDRP TEL+ L ++ +M
Sbjct: 242 VLYTLMTRCWDYDPSDRPRFTELV----------CSLSDVYQM 274
|
| >3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289 | Back alignment and structure |
|---|
Score = 65.3 bits (160), Expect = 2e-11
Identities = 66/341 (19%), Positives = 108/341 (31%), Gaps = 113/341 (33%)
Query: 360 LQPLGHGGFGHVVLC--KNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQ 412
++ LG FG V G A+K LKDK+ R E +RLQ
Sbjct: 14 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKT--LKDKA-EGPLREEFRHEAMLRARLQ 70
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +VV GV VT + L +
Sbjct: 71 HPNVVCLL------GV----------------------------VTKDQP------LSMI 90
Query: 473 MEYCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQGII 515
YC + D QI G+ ++ ++
Sbjct: 91 FSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVV 150
Query: 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQVGTY 572
H+DL N+ + ++KI D GL + + +L ++ P
Sbjct: 151 HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPI---------------- 194
Query: 573 FYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP- 626
+ APE I G K +D++S G+V +E++ P+ Q V+ ++ + LP
Sbjct: 195 RWMAPEAIMYG--KFSIDSDIWSYGVVLWEVFSYGLQPYC-GYSNQDVVEMIRNRQVLPC 251
Query: 627 ----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQ 659
P+W + LM + PS RP ++
Sbjct: 252 PDDCPAW----------VYALMIECWNEFPSRRPRFKDIHS 282
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329 | Back alignment and structure |
|---|
Score = 65.8 bits (161), Expect = 2e-11
Identities = 67/339 (19%), Positives = 106/339 (31%), Gaps = 109/339 (32%)
Query: 360 LQPLGHGGFGHVVLC--KNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
LG G FG V L N L + AVK LK+ S RE L+ LQHQ
Sbjct: 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKA--LKEASESARQDFQREAELLTMLQHQ 103
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
H+VR++ GV T E L + E
Sbjct: 104 HIVRFF------GV----------------------------CT------EGRPLLMVFE 123
Query: 475 YCP--------RTLRQVFESYDHFDKELAWHLF--------RQIVEGLAHIHGQGIIHRD 518
Y R+ + + L Q+ G+ ++ G +HRD
Sbjct: 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 183
Query: 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQ---LDQDAAFPTDTGGVSVDGTGQVGTYFYT 575
L N +KIGDFG+++ + + P + +
Sbjct: 184 LATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLP-----IR-----------WM 227
Query: 576 APE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP---- 626
PE I K ++D++S G+V +E++ P+ + + + Q EL
Sbjct: 228 PPESILYR--KFTTESDVWSFGVVLWEIFTYGKQPWY-QLSNTEAIDCITQGRELERPRA 284
Query: 627 -PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQD 660
P + +M P R S ++
Sbjct: 285 CPPE----------VYAIMRGCWQREPQQRHSIKDVHAR 313
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298 | Back alignment and structure |
|---|
Score = 65.4 bits (160), Expect = 2e-11
Identities = 58/372 (15%), Positives = 104/372 (27%), Gaps = 114/372 (30%)
Query: 343 SPNMSLPSSRYLNDFEEL-----QPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKS 394
+P + + L + +G G FG V + AVK L +
Sbjct: 8 NPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS--LNRIT 65
Query: 395 LPVNDRI--LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAA 452
+ + L E + H +V+ G+
Sbjct: 66 -DIGEVSQFLTEGIIMKDFSHPNVLSLL------GI------------------------ 94
Query: 453 SSADVTGQENKLESTYLYIQMEYCP--------RTLRQVFESYDHFDKELAWHLFRQIVE 504
E + + Y R D Q+ +
Sbjct: 95 ----CLRSEGSP-----LVVLPYMKHGDLRNFIRNETHNPTVKDLI------GFGLQVAK 139
Query: 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564
G+ ++ + +HRDL N D + +K+ DFGLA+ + + + + V
Sbjct: 140 GMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLAR--DMYDKEYYSVHNKTGAKLPVK 197
Query: 565 GTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDL 619
+ A E ++ K K+D++S G++ +EL P+ + + L
Sbjct: 198 ---------WMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYP-DVNTFDITVYL 245
Query: 620 KQKGELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYEL 670
Q L P L +M P RPS +EL+
Sbjct: 246 LQGRRLLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELV----------SR 285
Query: 671 LDNILRMMHSSE 682
+ I
Sbjct: 286 ISAIFSTFIGEH 297
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 2e-11
Identities = 79/323 (24%), Positives = 112/323 (34%), Gaps = 101/323 (31%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
++ LG G FG V +G AVK LK S+ + L E + +LQHQ +VR
Sbjct: 18 VERLGAGQFGEV--WMGYYNGHTKVAVKS--LKQGSMSPDA-FLAEANLMKQLQHQRLVR 72
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
Y V VT + +YI EY
Sbjct: 73 LY------AV----------------------------VTQEP-------IYIITEYMEN 91
Query: 479 T-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
L+ S + QI EG+A I + IHRDL NI K
Sbjct: 92 GSLVDFLKT--PSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCK 149
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEK 589
I DFGLA+ ++ + T + G F +TAPE I G K
Sbjct: 150 IADFGLARLIEDN-----------------EYTAREGAKFPIKWTAPEAINYG--TFTIK 190
Query: 590 ADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVAKFSEQESLL 640
+D++S GI+ E+ P+ M V+ +L++ + P L
Sbjct: 191 SDVWSFGILLTEIVTHGRIPYP-GMTNPEVIQNLERGYRMVRPDNCP----------EEL 239
Query: 641 RRLM----SPSPSDRPSATELLQ 659
+LM P DRP+ L
Sbjct: 240 YQLMRLCWKERPEDRPTFDYLRS 262
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327 | Back alignment and structure |
|---|
Score = 65.0 bits (159), Expect = 3e-11
Identities = 66/367 (17%), Positives = 117/367 (31%), Gaps = 108/367 (29%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHY--AVKKIRLKDKSLPVNDRI--LREVATLSRL-QHQH 415
+G G FG V+ + K DG A+K R+K+ + +D E+ L +L H +
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIK--RMKEYA-SKDDHRDFAGELEVLCKLGHHPN 87
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
++ G + YLY+ +EY
Sbjct: 88 IINLL------GA----------------------------CEHRG------YLYLAIEY 107
Query: 476 CP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQGIIHRD 518
P R R + + G+ ++ + IHRD
Sbjct: 108 APHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRD 167
Query: 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578
L NI KI DFGL++ Q+ G + V + A E
Sbjct: 168 LAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGRLPVR---------WMAIE 211
Query: 579 -IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKF 633
+ +D++S G++ +E+ P+ M + L Q L
Sbjct: 212 SLNYS--VYTTNSDVWSYGVLLWEIVSLGGTPYCG-MTCAELYEKLPQGYRLEKP--LNC 266
Query: 634 SEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDK 689
++ + LM P +RPS ++ L+ +L + +T++Y+K
Sbjct: 267 DDE---VYDLMRQCWREKPYERPSFAQI----------LVSLNRMLEERKTYVNTTLYEK 313
Query: 690 VVSSIFD 696
+ D
Sbjct: 314 FTYAGID 320
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 4e-11
Identities = 61/254 (24%), Positives = 88/254 (34%), Gaps = 77/254 (30%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHY-AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVR 418
+ LG G FG V + AVK +K S+ V L E + LQH +V+
Sbjct: 193 EKKLGAGQFGEV--WMATYNKHTKVAVKT--MKPGSMSVEA-FLAEANVMKTLQHDKLVK 247
Query: 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR 478
+ V VT + +YI E+ +
Sbjct: 248 LH------AV----------------------------VTKEP-------IYIITEFMAK 266
Query: 479 T-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
L+ + QI EG+A I + IHRDL NI A K
Sbjct: 267 GSLLDFLKS--DEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCK 324
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF---YTAPE-IEQGWPKIDEK 589
I DFGLA+ ++ + T + G F +TAPE I G K
Sbjct: 325 IADFGLARVIEDN-----------------EYTAREGAKFPIKWTAPEAINFG--SFTIK 365
Query: 590 ADMYSLGIVFFELW 603
+D++S GI+ E+
Sbjct: 366 SDVWSFGILLMEIV 379
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313 | Back alignment and structure |
|---|
Score = 64.2 bits (157), Expect = 5e-11
Identities = 34/195 (17%), Positives = 57/195 (29%), Gaps = 51/195 (26%)
Query: 360 LQPLGHGGFGHVVLCK-NKLDGR--HYAVKKIRLKDKSLPVNDRI--LREVATLSRLQHQ 414
+ LG G FG V+ + DG AVK +K + + L E A + H
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKT--MKLDNSSQREIEEFLSEAACMKDFSHP 96
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+V+R GV + + + +
Sbjct: 97 NVIRLL------GV----------------------------CI-EMSSQGIPKPMVILP 121
Query: 475 YCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
+ R + L I G+ ++ + +HRDL N
Sbjct: 122 FMKYGDLHTYLLYSRLETGPKHIPLQTLL-KFMVDIALGMEYLSNRNFLHRDLAARNCML 180
Query: 527 DARNDIKIGDFGLAK 541
+ + DFGL+K
Sbjct: 181 RDDMTVCVADFGLSK 195
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 Length = 344 | Back alignment and structure |
|---|
Score = 63.9 bits (156), Expect = 8e-11
Identities = 64/361 (17%), Positives = 121/361 (33%), Gaps = 115/361 (31%)
Query: 360 LQPLGHGGFGHVVLCK-NKLDGRHY----AVKKIRLKDKSLPVNDRI--LREVATLSRL- 411
+ LG G FG V+ + AVK LK+K+ ++R + E+ +++L
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKM--LKEKA-DSSEREALMSELKMMTQLG 106
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H+++V G T +Y+
Sbjct: 107 SHENIVNLL------GA----------------------------CTLSGP------IYL 126
Query: 472 QMEYCP--------RTLRQVFESYDHFDKELAWHLF----------------RQIVEGLA 507
EYC R+ R+ F + + Q+ +G+
Sbjct: 127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGME 186
Query: 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVD 564
+ + +HRDL N+ +KI DFGLA+ + + + +A P V
Sbjct: 187 FLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLP-----VK-- 239
Query: 565 GTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDL 619
+ APE + +G K+D++S GI+ +E++ +P+ +
Sbjct: 240 ---------WMAPESLFEG--IYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLI 288
Query: 620 KQKGELP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATEL---LQDALPPQMEYELL 671
+ ++ P ++ +E + +M + RPS L L L E
Sbjct: 289 QNGFKMDQP----FYATEE--IYIIMQSCWAFDSRKRPSFPNLTSFLGCQLADAEEAMYQ 342
Query: 672 D 672
+
Sbjct: 343 N 343
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382 | Back alignment and structure |
|---|
Score = 64.3 bits (157), Expect = 8e-11
Identities = 72/389 (18%), Positives = 125/389 (32%), Gaps = 122/389 (31%)
Query: 360 LQPLGHGGFGHVVLCK-NKLDGRHY------AVKKIRLKDKSLPVNDRI--LREVATLSR 410
+PLG G FG VVL + LD AVK LK + D + E+ +
Sbjct: 74 GKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKM--LKSDATE-KDLSDLISEMEMMKM 130
Query: 411 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+ +H++++ G T L
Sbjct: 131 IGKHKNIINLL------GA----------------------------CTQDG------PL 150
Query: 470 YIQMEYCP--------RTLRQVFESYDH-FDKELAWHLF--------RQIVEGLAHIHGQ 512
Y+ +EY + R Y + L Q+ G+ ++ +
Sbjct: 151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK 210
Query: 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQV 569
IHRDL N+ N +KI DFGLA+ + + + P V
Sbjct: 211 KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLP-----VK------- 258
Query: 570 GTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWHPFSTA------MERQIVLSDLKQK 622
+ APE + ++D++S G++ LW F+ + + + LK+
Sbjct: 259 ----WMAPEALFDR--IYTHQSDVWSFGVL---LWEIFTLGGSPYPGVPVEELFKLLKEG 309
Query: 623 GELP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
+ PS + + L +M PS RP+ +L E LD I+ +
Sbjct: 310 HRMDKPSNC---TNE---LYMMMRDCWHAVPSQRPTFKQL----------VEDLDRIVAL 353
Query: 678 MHSSEDTSIYDKVVSSIFDEETLDMKHHA 706
+ E + T ++ +
Sbjct: 354 TSNQEMGYYHHHHHHDYDIPTTENLYFNG 382
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296 | Back alignment and structure |
|---|
Score = 63.5 bits (155), Expect = 9e-11
Identities = 51/262 (19%), Positives = 79/262 (30%), Gaps = 76/262 (29%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK--KIRLKDKSLPVNDRILREVATLSRLQ 412
N + + +G G FG + L + G A+K ++ K L E +Q
Sbjct: 9 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLH------IESKIYKMMQ 62
Query: 413 H-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+ W G E Y +
Sbjct: 63 GGVGIPTIR--WC----------------------------------GAEGD----YNVM 82
Query: 472 QMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---D 527
ME +L +F F + L Q++ + +IH + IHRD+ P+N
Sbjct: 83 VMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGK 142
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV---DGTGQVGTYFYTAP----EIE 580
N + I DFGLAK + + + GT Y + IE
Sbjct: 143 KGNLVYIIDFGLAK-----------KYRDARTHQHIPYRENKNLTGTARYASINTHLGIE 191
Query: 581 QGWPKIDEKADMYSLGIVFFEL 602
Q + D+ SLG V
Sbjct: 192 QSR-----RDDLESLGYVLMYF 208
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373 | Back alignment and structure |
|---|
Score = 64.0 bits (156), Expect = 1e-10
Identities = 59/383 (15%), Positives = 107/383 (27%), Gaps = 114/383 (29%)
Query: 336 KPSVDSGSPNMSLPSSRYLNDFEEL-----QPLGHGGFGHVVLCKNKLDGRHY---AVKK 387
+ + +P + + L + +G G FG V + AVK
Sbjct: 65 HIDLSALNPELVQAVQHVVIGPSSLIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKS 124
Query: 388 IRLKDKSLPVNDRI--LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 445
L + + + L E + H +V+ G+
Sbjct: 125 --LNRIT-DIGEVSQFLTEGIIMKDFSHPNVLSLL------GI----------------- 158
Query: 446 TFSNRAASSADVTGQENKLESTYLYIQMEYCP--------RTLRQVFESYDHFDKELAWH 497
E + + Y R D
Sbjct: 159 -----------CLRSEGSP-----LVVLPYMKHGDLRNFIRNETHNPTVKDLI------G 196
Query: 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTD 557
Q+ +G+ + + +HRDL N D + +K+ DFGLA+ + + D+
Sbjct: 197 FGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARD--MYDKEFDSVHNKT 254
Query: 558 TGGVSVDGTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMER 612
+ V + A E ++ K K+D++S G++ +EL P+ +
Sbjct: 255 GAKLPVK---------WMALESLQTQ--KFTTKSDVWSFGVLLWELMTRGAPPYP-DVNT 302
Query: 613 QIVLSDLKQKGELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALP 663
+ L Q L P L +M P RPS +EL+
Sbjct: 303 FDITVYLLQGRRLLQPEYCP----------DPLYEVMLKCWHPKAEMRPSFSELVSR--- 349
Query: 664 PQMEYELLDNILRMMHSSEDTSI 686
+ I +
Sbjct: 350 -------ISAIFSTFIGEHYVHV 365
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397 | Back alignment and structure |
|---|
Score = 64.2 bits (156), Expect = 1e-10
Identities = 53/398 (13%), Positives = 104/398 (26%), Gaps = 144/398 (36%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ------- 412
++ LG G F V L + + A+K ++ + + L E+ L ++
Sbjct: 42 IRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHY---TETALDEIRLLKSVRNSDPNDP 98
Query: 413 -HQHVVRYYQAWFE-TG--------VADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 462
+ VV+ F+ +G V + G +
Sbjct: 99 NREMVVQLL-DDFKISGVNGTHICMVFEVLGHHLL------------------------- 132
Query: 463 KLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ-GIIHRDLTP 521
Y + +Q+++GL ++H + IIH D+ P
Sbjct: 133 ----------------KWIIKSN-YQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKP 175
Query: 522 NNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG---------------- 565
NI A + + T +
Sbjct: 176 ENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKV 235
Query: 566 ---------------TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFS 607
T + T Y + E+ G + AD++S + FEL + F
Sbjct: 236 KIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSG-YNTPADIWSTACMAFELATGDYLFE 294
Query: 608 TAMERQIVLSD--LKQK----GELPPSWVAK----------------------------- 632
+ + + G++P +
Sbjct: 295 PHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVL 354
Query: 633 -----FSEQE-----SLLRRLMSPSPSDRPSATELLQD 660
+S++E L ++ P R +A E L+
Sbjct: 355 VEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRH 392
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316 | Back alignment and structure |
|---|
Score = 63.1 bits (154), Expect = 1e-10
Identities = 72/360 (20%), Positives = 123/360 (34%), Gaps = 112/360 (31%)
Query: 360 LQPLGHGGFGHVVLCK-NKLDGRHY----AVKKIRLKDK-SLPVNDRILREVATLSRL-Q 412
+PLG G FG V+ +D AVK LK+ + + ++ E+ L +
Sbjct: 32 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKM--LKEGATHSEHRALMSELKILIHIGH 89
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +VV G T L +
Sbjct: 90 HLNVVNLL------GA----------------------------CTKPGGPL-----MVI 110
Query: 473 MEYCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQGII 515
+E+C R+ R F Y ++L Q+ +G+ + + I
Sbjct: 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCI 170
Query: 516 HRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQVGTY 572
HRDL NI +N +KI DFGLA+ + + DA P +
Sbjct: 171 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP-----LK---------- 215
Query: 573 FYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP- 626
+ APE I ++D++S G++ +E++ P+ + LK+ +
Sbjct: 216 -WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA 272
Query: 627 PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSE 682
P ++ E + + M PS RP+ +EL E L N+L+ +
Sbjct: 273 P----DYTTPE--MYQTMLDCWHGEPSQRPTFSEL----------VEHLGNLLQANAQQD 316
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298 | Back alignment and structure |
|---|
Score = 62.4 bits (152), Expect = 2e-10
Identities = 47/270 (17%), Positives = 86/270 (31%), Gaps = 72/270 (26%)
Query: 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK--KIRLKDKSLPVNDRILR 403
MS ++ ++ + +G G FG + N L+ + A+K R L
Sbjct: 1 MSGQNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLR------D 54
Query: 404 EVATLSRLQH-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQEN 462
E T L + Y +F GQE
Sbjct: 55 EYRTYKLLAGCTGIPNVY--YF----------------------------------GQEG 78
Query: 463 KLESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTP 521
+ + ++ +L + + F + +Q++ + IH + +++RD+ P
Sbjct: 79 L----HNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKP 134
Query: 522 NNIFFDAR-----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576
+N N I + DFG+ KF + Q + + GT Y +
Sbjct: 135 DNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY--------REKKNLSGTARYMS 186
Query: 577 PE----IEQGWPKIDEKADMYSLGIVFFEL 602
EQ + D+ +LG VF
Sbjct: 187 INTHLGREQSR-----RDDLEALGHVFMYF 211
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 2e-10
Identities = 46/214 (21%), Positives = 68/214 (31%), Gaps = 75/214 (35%)
Query: 360 LQPLGHGGFGHVVLCK-NKLDGRHY----AVKKIRLKDKSLPVNDRI--LREVATLSRLQ 412
+ LG G FG VV L GR AVK LK+ + P ++ L E L ++
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKM--LKENASP-SELRDLLSEFNVLKQVN 84
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H HV++ Y G + L +
Sbjct: 85 HPHVIKLY------GA----------------------------CSQDG------PLLLI 104
Query: 473 MEYCP--------RTLRQVFESYDHFDKELAWHLF-----------------RQIVEGLA 507
+EY R R+V Y QI +G+
Sbjct: 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQ 164
Query: 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
++ ++HRDL NI +KI DFGL++
Sbjct: 165 YLAEMKLVHRDLAARNILVAEGRKMKISDFGLSR 198
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483 | Back alignment and structure |
|---|
Score = 63.5 bits (154), Expect = 2e-10
Identities = 52/257 (20%), Positives = 81/257 (31%), Gaps = 66/257 (25%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H 413
N F + +G G FG + L N A+K +K K + ++L E LQ
Sbjct: 7 NKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK----HPQLLYESKIYRILQGG 62
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+ WF G E Y + M
Sbjct: 63 TGIPNVR--WF----------------------------------GVEGD----YNVLVM 82
Query: 474 EYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DAR 529
+ +L +F + L Q++ + +H + +HRD+ P+N
Sbjct: 83 DLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRA 142
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP----EIEQGWPK 585
N + I DFGLAK + Q + + GT Y + IEQ
Sbjct: 143 NQVYIIDFGLAKKYRDTSTHQHIPYR--------ENKNLTGTARYASVNTHLGIEQSR-- 192
Query: 586 IDEKADMYSLGIVFFEL 602
+ D+ SLG V
Sbjct: 193 ---RDDLESLGYVLMYF 206
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 3e-10
Identities = 60/368 (16%), Positives = 116/368 (31%), Gaps = 117/368 (31%)
Query: 345 NMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRI 401
++ +P R + +G G FG V + ++ A+K L + +
Sbjct: 13 DVLIPHER--VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKS--LSRIT-EMQQVE 67
Query: 402 --LREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTG 459
LRE + L H +V+ G+ +
Sbjct: 68 AFLREGLLMRGLNHPNVLALI------GI----------------------------MLP 93
Query: 460 QENKLESTYLYIQMEYCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511
E ++ + Y R+ ++ D Q+ G+ ++
Sbjct: 94 PEG-----LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS------FGLQVARGMEYLAE 142
Query: 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
Q +HRDL N D +K+ DFGLA+ + LD++
Sbjct: 143 QKFVHRDLAARNCMLDESFTVKVADFGLARDI----LDREYYSVQQHR----------HA 188
Query: 572 YF---YTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKG 623
+TA E ++ + K+D++S G++ +EL P+ ++ + L Q
Sbjct: 189 RLPVKWTALESLQTY--RFTTKSDVWSFGVLLWELLTRGAPPYR-HIDPFDLTHFLAQGR 245
Query: 624 ELP-----PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNI 674
LP P L ++M P+ RP+ L+ ++ I
Sbjct: 246 RLPQPEYCP----------DSLYQVMQQCWEADPAVRPTFRVLV----------GEVEQI 285
Query: 675 LRMMHSSE 682
+ +
Sbjct: 286 VSALLGDH 293
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364 | Back alignment and structure |
|---|
Score = 62.5 bits (152), Expect = 3e-10
Identities = 38/190 (20%), Positives = 71/190 (37%), Gaps = 37/190 (19%)
Query: 361 QPLGHGGFGHV-----VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
P+G GGFG + ++ VK + L E+ R
Sbjct: 41 LPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPL------FTELKFYQRAAKPE 94
Query: 416 VVRYYQAWFETGVADFDG-DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+ Q W T + G WGSG +K +Y ++ M+
Sbjct: 95 QI---QKWIRTRKLKYLGVPKYWGSGL-------------------HDKNGKSYRFMIMD 132
Query: 475 YCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 531
L++++E+ F ++ L +I++ L +IH +H D+ +N+ + +N
Sbjct: 133 RFGSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQ 192
Query: 532 IKIGDFGLAK 541
+ + D+GLA
Sbjct: 193 VYLVDYGLAY 202
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... Length = 334 | Back alignment and structure |
|---|
Score = 61.9 bits (151), Expect = 4e-10
Identities = 69/358 (19%), Positives = 119/358 (33%), Gaps = 115/358 (32%)
Query: 360 LQPLGHGGFGHVVLCK----NKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSR 410
+PLG G FG VV+ + +K + AVK LKD + D + E+ +
Sbjct: 40 GKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATE-KDLSDLVSEMEMMKM 96
Query: 411 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+ +H++++ G T L
Sbjct: 97 IGKHKNIINLL------GA----------------------------CTQDG------PL 116
Query: 470 YIQMEYCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQ 512
Y+ +EY R R Y + + Q+ G+ ++ Q
Sbjct: 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 176
Query: 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLE---QLDQDAAFPTDTGGVSVDGTGQV 569
IHRDL N+ N +KI DFGLA+ + + + P V
Sbjct: 177 KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLP-----VK------- 224
Query: 570 GTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELWHPFS------TAMERQIVLSDLKQK 622
+ APE + ++D++S G++ +W F+ + + + LK+
Sbjct: 225 ----WMAPEALFDR--VYTHQSDVWSFGVL---MWEIFTLGGSPYPGIPVEELFKLLKEG 275
Query: 623 GELP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATEL---LQDALPPQMEYELLD 672
+ P+ + + L +M PS RP+ +L L L E LD
Sbjct: 276 HRMDKPANC---TNE---LYMMMRDCWHAVPSQRPTFKQLVEDLDRILTLTTNEEYLD 327
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289 | Back alignment and structure |
|---|
Score = 60.8 bits (148), Expect = 7e-10
Identities = 50/332 (15%), Positives = 102/332 (30%), Gaps = 96/332 (28%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR-----LKDKSLPVNDRILREVATLS 409
D + LG G F + + G + + + L ++ + +S
Sbjct: 8 EDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMS 67
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+L H+H+V Y GV +
Sbjct: 68 KLSHKHLVLNY------GV----------------------------CVCGDE------N 87
Query: 470 YIQMEYCPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 524
+ E+ L+ ++ + + + +Q+ + + +IH ++ NI
Sbjct: 88 ILVQEFVKFGSLDTYLK---KNKNCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNI 144
Query: 525 --------FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF--- 573
IK+ D G++ + L +D
Sbjct: 145 LLIREEDRKTGNPPFIKLSDPGISITV----LPKD------------------ILQERIP 182
Query: 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-PS 628
+ PE + ++ D +S G +E+ P S A++ Q L + + +LP P
Sbjct: 183 WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLS-ALDSQRKLQFYEDRHQLPAPK 241
Query: 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660
+E +L+ M P RPS +++D
Sbjct: 242 A----AELANLINNCMDYEPDHRPSFRAIIRD 269
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359 | Back alignment and structure |
|---|
Score = 61.1 bits (148), Expect = 7e-10
Identities = 59/346 (17%), Positives = 112/346 (32%), Gaps = 70/346 (20%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK----DKSLPVNDRILREVATLSRL-QHQH 415
+PLG G FG V+ + + + +K + + ++ E+ L + H +
Sbjct: 28 KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLN 87
Query: 416 VVRYYQAWFETG----------------------------VADFDGDSMWGSGTLASSTF 447
VV A + G G + +
Sbjct: 88 VVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPV 147
Query: 448 SNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLA 507
+ + + Q + + D E Q+ +G+
Sbjct: 148 DLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGME 207
Query: 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQL---DQDAAFPTDTGGVSVD 564
+ + IHRDL NI +N +KI DFGLA+ + + DA P
Sbjct: 208 FLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLK------- 260
Query: 565 GTGQVGTYFYTAPE-IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDL 619
+ APE I ++D++S G++ +E++ P+ + L
Sbjct: 261 ---------WMAPETIFDR--VYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRL 309
Query: 620 KQKGELP-PSWVAKFSEQESLLRRLM----SPSPSDRPSATELLQD 660
K+ + P ++ E + + M PS RP+ +EL++
Sbjct: 310 KEGTRMRAP----DYTTPE--MYQTMLDCWHGEPSQRPTFSELVEH 349
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343 | Back alignment and structure |
|---|
Score = 60.0 bits (146), Expect = 2e-09
Identities = 65/356 (18%), Positives = 120/356 (33%), Gaps = 97/356 (27%)
Query: 360 LQPLGHGGFGHVVLC--KNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQ 412
++ +G G FG V L + AVK LK+++ + + RE A ++
Sbjct: 52 VRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKM--LKEEA-SADMQADFQREAALMAEFD 108
Query: 413 HQHVVRYYQAWFETGVADFDGDSMW------GSGTLASSTFSNRAASSADVTGQENKLES 466
+ ++V+ GV G M G L S + ++ + +
Sbjct: 109 NPNIVKLL------GVC-AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRA 161
Query: 467 TYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
P L E + RQ+ G+A++ + +HRDL N
Sbjct: 162 RVSSPG----PPPLSC---------AEQL-CIARQVAAGMAYLSERKFVHRDLATRNCLV 207
Query: 527 DARNDIKIGDFGLAKFLKLEQLD-----QDAAFPTDTGGVSVDGTGQVGTYFYTAPE-IE 580
+KI DFGL++ + D + A P + + PE I
Sbjct: 208 GENMVVKIADFGLSR--NIYSADYYKADGNDAIP-----IR-----------WMPPESIF 249
Query: 581 QGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-----PSWVA 631
+ ++D+++ G+V +E++ P+ M + V+ ++ L P
Sbjct: 250 YN--RYTTESDVWAYGVVLWEIFSYGLQPYY-GMAHEEVIYYVRDGNILACPENCPLE-- 304
Query: 632 KFSEQESLLRRLM----SPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSED 683
L LM S P+DRPS + + +L + +
Sbjct: 305 --------LYNLMRLCWSKLPADRPSFCSI----------HRILQRMCERAEGTVG 342
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327 | Back alignment and structure |
|---|
Score = 59.2 bits (144), Expect = 2e-09
Identities = 67/331 (20%), Positives = 102/331 (30%), Gaps = 97/331 (29%)
Query: 360 LQPLGHGGFGHVV--LCKNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQ 412
++ LGHG FG V + AVK L + D + L E +S+
Sbjct: 35 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT--LPEVC-SEQDELDFLMEALIISKFN 91
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
HQ++VR GV +S +I
Sbjct: 92 HQNIVRCI------GV----------------------------SL------QSLPRFIL 111
Query: 473 MEYCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 524
ME R R H+ R I G ++ IHRD+ N
Sbjct: 112 MELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNC 171
Query: 525 FFDARND---IKIGDFGLAKFLKLEQ---LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578
KIGDFG+A+ + A P V + PE
Sbjct: 172 LLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLP-----VK-----------WMPPE 215
Query: 579 -IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKF 633
+G K D +S G++ +E++ P+ + Q VL + G + P
Sbjct: 216 AFMEG--IFTSKTDTWSFGVLLWEIFSLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCP- 271
Query: 634 SEQESLLRRLM----SPSPSDRPSATELLQD 660
+ R+M P DRP+ +L+
Sbjct: 272 ----GPVYRIMTQCWQHQPEDRPNFAIILER 298
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A Length = 370 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 4e-09
Identities = 45/209 (21%), Positives = 69/209 (33%), Gaps = 70/209 (33%)
Query: 360 LQPLGHGGFGHVV------LCKNKLDGRHY-AVKKIRLKDKSLPVNDRI--LREVATLSR 410
+PLG G FG VV + K+K AVK LKD + D + E+ +
Sbjct: 86 GKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKM--LKDDATE-KDLSDLVSEMEMMKM 142
Query: 411 L-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+ +H++++ G T L
Sbjct: 143 IGKHKNIINLL------GA----------------------------CTQDG------PL 162
Query: 470 YIQMEYCP--------RTLRQVFESYDHFDKELAWHLF---------RQIVEGLAHIHGQ 512
Y+ +EY R R Y + + Q+ G+ ++ Q
Sbjct: 163 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ 222
Query: 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAK 541
IHRDL N+ N +KI DFGLA+
Sbjct: 223 KCIHRDLAARNVLVTENNVMKIADFGLAR 251
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330 | Back alignment and structure |
|---|
Score = 58.5 bits (142), Expect = 4e-09
Identities = 38/204 (18%), Positives = 69/204 (33%), Gaps = 55/204 (26%)
Query: 347 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK--KIRLKDKSLPVNDRILRE 404
S+ +F + +G G FG + L KN + A+K ++ + L E
Sbjct: 1 SMGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLH------LE 54
Query: 405 VATLSRLQH-QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 463
+L + + Y +F G K
Sbjct: 55 YRFYKQLGSGDGIPQVY--YF----------------------------------GPCGK 78
Query: 464 LESTYLYIQMEYCPRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPN 522
Y + +E +L +F+ D F + + Q++ + ++H + +I+RD+ P
Sbjct: 79 ----YNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPE 134
Query: 523 NIFF-----DARNDIKIGDFGLAK 541
N + I I DF LAK
Sbjct: 135 NFLIGRPGNKTQQVIHIIDFALAK 158
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367 | Back alignment and structure |
|---|
Score = 57.8 bits (140), Expect = 1e-08
Identities = 71/389 (18%), Positives = 120/389 (30%), Gaps = 99/389 (25%)
Query: 304 RDLASKPSSQFNKTFNQVFHQKMVSSRVSQFWKPSVDSGSPNMSLPSSRYL--NDFEELQ 361
+L + + + K+ +S + + P+ S+ + + + ++
Sbjct: 18 ENLYFQGAMGSELQSPEYKLSKLRTSTIMTDYNPNYCFAGKTSSISDLKEVPRKNITLIR 77
Query: 362 PLGHGGFGHVV--LCKNKLDGRHY---AVKKIRLKDKSLPVNDRI--LREVATLSRLQHQ 414
LGHG FG V + AVK L + D + L E +S+ HQ
Sbjct: 78 GLGHGAFGEVYEGQVSGMPNDPSPLQVAVKT--LPEVC-SEQDELDFLMEALIISKFNHQ 134
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++VR GV +S +I +E
Sbjct: 135 NIVRCI------GV----------------------------SL------QSLPRFILLE 154
Query: 475 YCP--------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
R R H+ R I G ++ IHRD+ N
Sbjct: 155 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLL 214
Query: 527 DARND---IKIGDFGLAKFLKLEQ---LDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE-I 579
KIGDFG+A+ + A P V + PE
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLP-----VK-----------WMPPEAF 258
Query: 580 EQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSE 635
+G K D +S G++ +E++ P+ + Q VL + G + P
Sbjct: 259 MEG--IFTSKTDTWSFGVLLWEIFSLGYMPYP-SKSNQEVLEFVTSGGRMDPPKNCP--- 312
Query: 636 QESLLRRLM----SPSPSDRPSATELLQD 660
+ R+M P DRP+ +L+
Sbjct: 313 --GPVYRIMTQCWQHQPEDRPNFAIILER 339
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.7 bits (141), Expect = 1e-08
Identities = 76/582 (13%), Positives = 156/582 (26%), Gaps = 176/582 (30%)
Query: 155 NYEVMWRKIDKNVKPLMIPDANQGTALIPSAKLDTVKEENE---DDNRSISTTDSSTSPM 211
NY+ + I + PS E+ + +DN+ + + S
Sbjct: 90 NYKFLMSPIKTEQR-------------QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQP 136
Query: 212 EEWVENGIKGENRDSLLQDHGSNNDGG------------DTEIDRLESFSFA----SLGQ 255
+ + + G G ++ F +L
Sbjct: 137 YLKLRQALLELRPAKNVLIDG---VLGSGKTWVALDVCLSYKV--QCKMDFKIFWLNLKN 191
Query: 256 DQASQDIEKDLILVHLLRLACQSTGSLTDALPQIATELYNLGIFSERGRDL-ASKP---- 310
+ +L L +L Q + T + + R L SKP
Sbjct: 192 CN-----SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENC 246
Query: 311 --------SSQFNKTFNQVFHQKM-VSSR---------VSQFWKPSVDSGSPNMSLPSS- 351
+++ FN K+ +++R + S+D S ++
Sbjct: 247 LLVLLNVQNAKAWNAFN--LSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVK 304
Query: 352 ----RYLN-DFEEL-------QPLGHGGFGHVVLCKNKLDG----RHYAVKKI-RLKDKS 394
+YL+ ++L P ++ L +H K+ + + S
Sbjct: 305 SLLLKYLDCRPQDLPREVLTTNPRRLSIIA--ESIRDGLATWDNWKHVNCDKLTTIIESS 362
Query: 395 L----PVNDR-------ILRE-----VATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438
L P R + LS + WF+ + +
Sbjct: 363 LNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLI-----------WFD-VIKSDVMVVV-- 408
Query: 439 SGTLASSTFSNRAASSADVTGQENKLESTYLY-IQMEYCPRTL------RQVFESYDHFD 491
+ S + ++ K + + I +E + R + + Y+
Sbjct: 409 ------NKLHKY--SLVE---KQPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPK 457
Query: 492 KELAWHLFRQIVEG-----LA-HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL-- 543
+ L ++ + H+ R +F D R FL
Sbjct: 458 TFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR------------FLEQ 505
Query: 544 KLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW 603
K+ + + G ++ Q+ Y P I PK + + +
Sbjct: 506 KIRH----DSTAWNASGSILNTLQQLKFY---KPYICDNDPKYERLVN---------AIL 549
Query: 604 HPFSTAMERQIVLS---DLKQKGELPPSWVAKFSEQESLLRR 642
F +E ++ S DL + + A F E ++R
Sbjct: 550 D-FLPKIEENLICSKYTDLLRIALMAED-EAIFEEAHKQVQR 589
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 58.3 bits (140), Expect = 1e-08
Identities = 95/697 (13%), Positives = 185/697 (26%), Gaps = 233/697 (33%)
Query: 408 LSRLQHQH--VVRYYQAWFETGVADFD----GDSMWGSGTLASSTFSNRAASSADVTGQE 461
Q+Q+ ++ ++ F V +FD D S S + +
Sbjct: 11 TGEHQYQYKDILSVFEDAF---VDNFDCKDVQDMP-------KSILSKEEID--HIIMSK 58
Query: 462 NKLESTY-LYIQMEYCPRTLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDL 519
+ + T L+ + + Q F E + + + + + I RD
Sbjct: 59 DAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 520 TPN-NIFFDARNDIKIGDFGLAKFLKLEQ-LDQDAAFPTDTGGVSVDGTGQVGTYFYTA- 576
N N F N + +LKL Q L + V +DG G +
Sbjct: 119 LYNDNQVFAKYN-VSRLQ----PYLKLRQALLEL----RPAKNVLIDGVLGSGKTWVALD 169
Query: 577 ----PEIEQG------WPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELP 626
+++ W + ++ + +L + + + +
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID---------PNWTSRSDHS 220
Query: 627 PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSI 686
+ + ++ LRRL+ +P LL +L N+ ++
Sbjct: 221 SNIKLRIHSIQAELRRLL----KSKPYENCLL-----------VLLNV-------QNAKA 258
Query: 687 YDKVVSSIFDEETLDMKHHAGTLRLNRDNTSSIQYSDLDTELRDYVVQV----------T 736
++ F+ L R + L ++
Sbjct: 259 WNA-----FN-------LSCKILLTTRF--KQV-TDFLSAATTTHISLDHHSMTLTPDEV 303
Query: 737 KEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS---HELRLPFIRWAIS 793
K + K+L+ P D P+ + LS +R W
Sbjct: 304 KSLL----LKYLDCRP----QDLPR--------EVLTTNPRRLSIIAESIRDGLATW--- 344
Query: 794 NQKSSFKRYEISSVYRRAIGHS----PPN----RY-----LQGDFDIIGGASALTEAEVL 840
++K + I S P + I +L
Sbjct: 345 ---DNWKHVNCDKL-TTIIESSLNVLEPAEYRKMFDRLSVFPPSAHI--------PTILL 392
Query: 841 KV---------TMDIVTRFFHAESC-------------DIHLN-----------HGDLLE 867
+ M +V + H S I+L H +++
Sbjct: 393 SLIWFDVIKSDVMVVVNK-LHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVD 451
Query: 868 A--------------------IWSWAG---IKAEHREKVAELLAMMGSLRPQSSEW-KSK 903
+S G EH E++ + R + + K
Sbjct: 452 HYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFR-----FLEQK 506
Query: 904 WVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLR 963
IR N + +++N LQ L+F + + + P + L L
Sbjct: 507 ---IRHDSTA-WNASGSILNTLQQ--LKF----------YKPYICDNDPKYERLVNAILD 550
Query: 964 -IWRIEKNIYID--------ALMPPIESYHRNLFFQV 991
+ +IE+N+ ALM E+ QV
Sbjct: 551 FLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHKQV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 4e-06
Identities = 60/416 (14%), Positives = 109/416 (26%), Gaps = 125/416 (30%)
Query: 799 FKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858
F+ E Y+ + +FD K D+ E D
Sbjct: 9 FETGEHQYQYKDILSVFEDA--FVDNFDC-------------KDVQDMPKSILSKEEIDH 53
Query: 859 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEW-KSKWVVIRRQLLQELNL 917
+ D + +E++ + + + + ++ S +RQ +
Sbjct: 54 IIMSKDAVSGTLRLFWTLLSKQEEMVQ--KFVEEVLRINYKFLMSPIKTEQRQPSMMTRM 111
Query: 918 AEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALM 977
+RL F A + RL+ P K R+AL EL R KN+ ID +
Sbjct: 112 YIEQRDRLYNDNQVF---AKYNVSRLQ---PYLK-LRQALLEL-----RPAKNVLIDG-V 158
Query: 978 PPI------------ESYHRNLFFQVF--SVKEKYPATLVEGTLLAVGGRYDYLLHRMWD 1023
+ F++F ++K V L LL+++ D
Sbjct: 159 LGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQK-------LLYQI-D 210
Query: 1024 REYVGYASRT-NPPSGVG-ASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVER 1081
+ + + N + L +++ KP N LLV
Sbjct: 211 PNWTSRSDHSSNIKLRIHSIQAELRRLLKS-----KPYEN--------------CLLV-- 249
Query: 1082 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILT--DTGAQKGLV--KVRH 1137
+ + F ++ C ++LT L H
Sbjct: 250 ---LLNVQNAKAWNAF------------------NLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 1138 LDVKKEKEV--QRESLVRF---------------------LLDAIASQFRN-PSLW 1169
+ + E L IA R+ + W
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATW 344
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 46.4 bits (109), Expect = 6e-05
Identities = 81/550 (14%), Positives = 155/550 (28%), Gaps = 184/550 (33%)
Query: 658 LQDALPPQMEYELLDNILRMMHSSEDTS-IYDKVVSSIFDEETLDMKHHAGTLRLNRD-N 715
+QD + E +D+I+ + T ++ ++S EE + K LR+N
Sbjct: 38 VQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSK--QEEMVQ-KFVEEVLRINYKFL 94
Query: 716 TSSIQYSDLDTEL--RDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHG 773
S I+ + R Y+ Q + L D F + V
Sbjct: 95 MSPIKTEQRQPSMMTRMYIEQRDR-----------------LYNDNQVFAKYNVS----- 132
Query: 774 GDLLELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSPPNRY--LQGDFDIIGGA 831
L+ +LR A+ + P + + G G+
Sbjct: 133 --RLQPYLKLRQ-----ALLELR--------------------PAKNVLIDGV----LGS 161
Query: 832 --SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAM 889
+ + +V + + + I W +K + + +L M
Sbjct: 162 GKTWVA-LDVCL-SYKVQCKM----DFKIF------------WLNLKNCNSPE--TVLEM 201
Query: 890 MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPA 949
+ L I + + + R+ LR L
Sbjct: 202 LQKL----------LYQIDPNWTSRSDHSSNIKLRI-----------HSIQAELRRLL-K 239
Query: 950 DKPTRKAL---DELY-LRIW-------RI-----EKNIYIDALMPPIESYHRNLFFQVFS 993
KP L + + W +I K + D L ++ +
Sbjct: 240 SKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQV-TDFLSAATTTH-------ISL 291
Query: 994 VKEKYPATLVEG-TLLAVGGRYDYLLHRMWD--REYVGYASRTNPP--SGVGASLALETI 1048
T E +LL YL R D RE TNP S + S+
Sbjct: 292 DHHSMTLTPDEVKSLLL-----KYLDCRPQDLPRE----VLTTNPRRLSIIAESIRDGLA 342
Query: 1049 IQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQF---------VP 1099
+K V + T+++ S + L + F
Sbjct: 343 TWDN---WKHVNCDKLTTIIESS-------------LNVLEPAEYRKMFDRLSVFPPSAH 386
Query: 1100 VPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVR-----------HLDVKKEKEVQR 1148
+P L+ + + D+ ++ + + LV+ + +L++K + E
Sbjct: 387 IPTILLSLIWFDVIKSDVM---VVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLE-NE 442
Query: 1149 ESLVRFLLDA 1158
+L R ++D
Sbjct: 443 YALHRSIVDH 452
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
Score = 57.4 bits (139), Expect = 1e-08
Identities = 24/193 (12%), Positives = 61/193 (31%), Gaps = 43/193 (22%)
Query: 361 QPLGHGGFGHV--------VLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 412
G + + C + + +++K + R+ E R
Sbjct: 48 SFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLK-------LDAKDGRLFNEQNFFQRAA 100
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
V ++ + T + + G G ++K Y ++
Sbjct: 101 KPLQVNKWKKLYSTPLLAIP--TCMGFGV------------------HQDK----YRFLV 136
Query: 473 MEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-- 528
+ R+L+ + + + ++++ L +H +H ++T NIF D
Sbjct: 137 LPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPED 196
Query: 529 RNDIKIGDFGLAK 541
++ + + +G A
Sbjct: 197 QSQVTLAGYGFAF 209
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* Length = 540 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 1e-04
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 11/73 (15%)
Query: 471 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
I M Y + + V E + ++A +I E + +H +IH DLT +N FD
Sbjct: 416 IMMSYINGKLAKDVIED----NLDIA----YKIGEIVGKLHKNDVIHNDLTTSNFIFD-- 465
Query: 530 NDIKIGDFGLAKF 542
D+ I DFGL K
Sbjct: 466 KDLYIIDFGLGKI 478
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1170 | |||
| 4g85_A | 517 | Histidine-tRNA ligase, cytoplasmic; synthetase; 3. | 100.0 | |
| 3net_A | 465 | Histidyl-tRNA synthetase; aminoacyl-tRNA synthetas | 100.0 | |
| 3lc0_A | 456 | Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-t | 100.0 | |
| 4g84_A | 464 | Histidine--tRNA ligase, cytoplasmic; synthetase; 2 | 100.0 | |
| 1wu7_A | 434 | Histidyl-tRNA synthetase; ligase, structural genom | 100.0 | |
| 3od1_A | 400 | ATP phosphoribosyltransferase regulatory subunit; | 100.0 | |
| 4e51_A | 467 | Histidine--tRNA ligase; seattle structural genomic | 100.0 | |
| 1h4v_B | 421 | Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA | 100.0 | |
| 1htt_A | 423 | Histidyl-tRNA synthetase; complex (tRNA synthetase | 100.0 | |
| 3rac_A | 373 | Histidine-tRNA ligase; structural genomics, PSI-bi | 100.0 | |
| 3hyh_A | 275 | Carbon catabolite-derepressing protein kinase; kin | 100.0 | |
| 4g31_A | 299 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 1qe0_A | 420 | Histidyl-tRNA synthetase; class II tRNA synthetase | 100.0 | |
| 4aw0_A | 311 | HPDK1, 3-phosphoinositide-dependent protein kinase | 100.0 | |
| 3fpq_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 4b9d_A | 350 | Serine/threonine-protein kinase NEK1; transferase, | 100.0 | |
| 4fih_A | 346 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 1z7m_A | 344 | ATP phosphoribosyltransferase regulatory subunit; | 100.0 | |
| 3ubd_A | 304 | Ribosomal protein S6 kinase alpha-3; kinase-inhibi | 100.0 | |
| 4fie_A | 423 | Serine/threonine-protein kinase PAK 4; kinase doma | 100.0 | |
| 4b99_A | 398 | Mitogen-activated protein kinase 7; transferase, i | 100.0 | |
| 4g3f_A | 336 | NF-kappa-beta-inducing kinase; non-RD kinase, prot | 100.0 | |
| 3omv_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4asz_A | 299 | BDNF/NT-3 growth factors receptor; transferase, TR | 100.0 | |
| 4gt4_A | 308 | Tyrosine-protein kinase transmembrane receptor RO; | 100.0 | |
| 4aoj_A | 329 | High affinity nerve growth factor receptor; transf | 100.0 | |
| 3v5w_A | 689 | G-protein coupled receptor kinase 2; inhibitor com | 100.0 | |
| 4ase_A | 353 | Vascular endothelial growth factor receptor 2; tra | 100.0 | |
| 4f9c_A | 361 | Cell division cycle 7-related protein kinase; Ser/ | 100.0 | |
| 3uto_A | 573 | Twitchin; kinase, muscle sarcomere, transferase; H | 100.0 | |
| 1usy_A | 275 | ATP phosphoribosyltransferase regulatory subunit; | 100.0 | |
| 3hmm_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3fe3_A | 328 | MAP/microtubule affinity-regulating kinase 3; seri | 100.0 | |
| 3o0g_A | 292 | Cell division protein kinase 5; kinase activator c | 100.0 | |
| 3qd2_B | 332 | Eukaryotic translation initiation factor 2-alpha; | 100.0 | |
| 2yab_A | 361 | Death-associated protein kinase 2; apoptosis, tran | 100.0 | |
| 1o6l_A | 337 | RAC-beta serine/threonine protein kinase; protein | 100.0 | |
| 3niz_A | 311 | Rhodanese family protein; structural genomics, str | 100.0 | |
| 3zgw_A | 347 | Maternal embryonic leucine zipper kinase; transfer | 100.0 | |
| 3txo_A | 353 | PKC-L, NPKC-ETA, protein kinase C ETA type; phosph | 100.0 | |
| 3soa_A | 444 | Calcium/calmodulin-dependent protein kinase type a | 100.0 | |
| 1ob3_A | 288 | PFPK5, cell division control protein 2 homolog; tr | 100.0 | |
| 1fot_A | 318 | TPK1 delta, CAMP-dependent protein kinase type 1; | 100.0 | |
| 3fxz_A | 297 | Serine/threonine-protein kinase PAK 1; transferase | 100.0 | |
| 3rp9_A | 458 | Mitogen-activated protein kinase; structural genom | 100.0 | |
| 3oz6_A | 388 | Mitogen-activated protein kinase 1, serine/threon | 100.0 | |
| 3gbz_A | 329 | Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide- | 100.0 | |
| 2bdw_A | 362 | Hypothetical protein K11E8.1D; kinase, calmodulin | 100.0 | |
| 4dc2_A | 396 | Protein kinase C IOTA type; kinase, substrate, cel | 100.0 | |
| 3tki_A | 323 | Serine/threonine-protein kinase CHK1; cell checkpo | 100.0 | |
| 2eue_A | 275 | Carbon catabolite derepressing protein kinase; kin | 100.0 | |
| 1rdq_E | 350 | PKA C-alpha, CAMP-dependent protein kinase, alpha- | 100.0 | |
| 2y0a_A | 326 | Death-associated protein kinase 1; transferase, ca | 100.0 | |
| 3a8x_A | 345 | Protein kinase C IOTA type; transferase; HET: TPO; | 100.0 | |
| 3g33_A | 308 | Cell division protein kinase 4; Ser/Thr protein ki | 100.0 | |
| 1xjd_A | 345 | Protein kinase C, theta type; PKC-theta, ATP, AMP, | 100.0 | |
| 3ttj_A | 464 | Mitogen-activated protein kinase 10; JNK3, protein | 100.0 | |
| 4fr4_A | 384 | YANK1, serine/threonine-protein kinase 32A; struct | 100.0 | |
| 2pmi_A | 317 | Negative RE, cyclin-dependent protein kinase PHO85 | 100.0 | |
| 1tki_A | 321 | Titin; serine kinase, muscle, autoinhibition; 2.00 | 100.0 | |
| 2i0e_A | 353 | Protein kinase C-beta II; serine/threonine protein | 100.0 | |
| 4agu_A | 311 | Cyclin-dependent kinase-like 1; transferase, phosp | 100.0 | |
| 3h4j_B | 336 | AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin | 100.0 | |
| 3p1a_A | 311 | MYT1 kinase, membrane-associated tyrosine- and thr | 100.0 | |
| 3mwu_A | 486 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 1cm8_A | 367 | Phosphorylated MAP kinase P38-gamma; phosphorylati | 100.0 | |
| 3kk8_A | 284 | Calcium/calmodulin dependent protein kinase II; AT | 100.0 | |
| 2r5t_A | 373 | Serine/threonine-protein kinase SGK1; AGC protein | 100.0 | |
| 4aw2_A | 437 | Serine/threonine-protein kinase MRCK alpha; transf | 100.0 | |
| 3lij_A | 494 | Calcium/calmodulin dependent protein kinase with A | 100.0 | |
| 3n9x_A | 432 | Phosphotransferase; malaria kinase, structural gen | 100.0 | |
| 3mi9_A | 351 | Cell division protein kinase 9; P-TEFB, HIV-1, pro | 100.0 | |
| 3uc3_A | 361 | Serine/threonine-protein kinase SRK2I; SNRK2, ABA | 100.0 | |
| 3a62_A | 327 | Ribosomal protein S6 kinase beta-1; kinase domain, | 100.0 | |
| 3is5_A | 285 | Calcium-dependent protein kinase; CDPK, structural | 100.0 | |
| 2zv2_A | 298 | Calcium/calmodulin-dependent protein kinase kinas; | 100.0 | |
| 3v8s_A | 410 | RHO-associated protein kinase 1; dimerization, myo | 100.0 | |
| 4ejn_A | 446 | RAC-alpha serine/threonine-protein kinase; AKT1, a | 100.0 | |
| 2vd5_A | 412 | DMPK protein; serine/threonine-protein kinase, kin | 100.0 | |
| 3gni_B | 389 | Strad alpha; kinase fold, pseudokinase, alpha heli | 100.0 | |
| 3c0i_A | 351 | Peripheral plasma membrane protein CASK; neurexin, | 100.0 | |
| 1t4h_A | 290 | Serine/threonine-protein kinase WNK1; protein seri | 100.0 | |
| 2r3i_A | 299 | Cell division protein kinase 2; serine/threonine-p | 100.0 | |
| 3q5i_A | 504 | Protein kinase; CDPK, malaria, phosphotransferase, | 100.0 | |
| 3mtl_A | 324 | Cell division protein kinase 16; pctaire1, indirub | 100.0 | |
| 2w4o_A | 349 | Calcium/calmodulin-dependent protein kinase type I | 100.0 | |
| 2a2a_A | 321 | Death-associated protein kinase 2; autoinhibition, | 100.0 | |
| 1x8b_A | 289 | WEE1HU, WEE1-like protein kinase; cell cycle, tran | 100.0 | |
| 2j3l_A | 572 | Prolyl-tRNA synthetase; class II aminoacyl- T synt | 100.0 | |
| 1kob_A | 387 | Twitchin; kinase, intrasteric regulation; 2.30A {A | 100.0 | |
| 3llt_A | 360 | Serine/threonine kinase-1, pflammer; lammer kinase | 100.0 | |
| 2xrw_A | 371 | Mitogen-activated protein kinase 8; transcription, | 100.0 | |
| 1zy4_A | 303 | Serine/threonine-protein kinase GCN2; translation | 100.0 | |
| 2fst_X | 367 | Mitogen-activated protein kinase 14; active mutant | 100.0 | |
| 1ua2_A | 346 | CAK, cell division protein kinase 7; cell cycle, p | 100.0 | |
| 4aaa_A | 331 | Cyclin-dependent kinase-like 2; transferase, phosp | 100.0 | |
| 3dbq_A | 343 | Dual specificity protein kinase TTK; MPS1 structur | 100.0 | |
| 3nyv_A | 484 | Calmodulin-domain protein kinase 1; serine/threoni | 100.0 | |
| 3fme_A | 290 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2c30_A | 321 | Serine/threonine-protein kinase PAK 6; CRIB domain | 100.0 | |
| 2yex_A | 276 | Serine/threonine-protein kinase CHK1; transferase, | 100.0 | |
| 2zmd_A | 390 | Dual specificity protein kinase TTK; MPS1, T686A, | 100.0 | |
| 3kvw_A | 429 | DYRK2, dual specificity tyrosine-phosphorylation-r | 100.0 | |
| 3f3z_A | 277 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2y94_A | 476 | 5'-AMP-activated protein kinase catalytic subunit; | 100.0 | |
| 3ork_A | 311 | Serine/threonine protein kinase; structural genomi | 100.0 | |
| 4exu_A | 371 | Mitogen-activated protein kinase 13; P38 kinase, t | 100.0 | |
| 3qyz_A | 364 | Mitogen-activated protein kinase 1; transferase, s | 100.0 | |
| 1phk_A | 298 | Phosphorylase kinase; glycogen metabolism, transfe | 100.0 | |
| 1u5q_A | 348 | Serine/threonine protein kinase TAO2; transferase; | 100.0 | |
| 3kn6_A | 325 | Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1 | 100.0 | |
| 3fdn_A | 279 | Serine/threonine-protein kinase 6; aurora kinase i | 100.0 | |
| 2ac3_A | 316 | MAP kinase-interacting serine/threonine kinase 2; | 100.0 | |
| 2qr7_A | 342 | Ribosomal protein S6 kinase alpha-3; kinase domain | 100.0 | |
| 1evl_A | 401 | Threonyl-tRNA synthetase; amino acid recognition, | 100.0 | |
| 1j1b_A | 420 | Glycogen synthase kinase-3 beta; complex, TAU, AMP | 100.0 | |
| 3dls_A | 335 | PAS domain-containing serine/threonine-protein KI; | 100.0 | |
| 3eb0_A | 383 | Putative uncharacterized protein; kinase cryptospo | 100.0 | |
| 3pfq_A | 674 | PKC-B, PKC-beta, protein kinase C beta type; phosp | 100.0 | |
| 2acx_A | 576 | G protein-coupled receptor kinase 6; GRK, G transf | 100.0 | |
| 2b9h_A | 353 | MAP kinase FUS3, mitogen-activated protein kinase | 100.0 | |
| 3an0_A | 340 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2jam_A | 304 | Calcium/calmodulin-dependent protein kinase type 1 | 100.0 | |
| 3hko_A | 345 | Calcium/calmodulin-dependent protein kinase with d | 100.0 | |
| 2y7j_A | 365 | Phosphorylase B kinase gamma catalytic chain, test | 100.0 | |
| 3bhy_A | 283 | Death-associated protein kinase 3; death associate | 100.0 | |
| 2x4f_A | 373 | Myosin light chain kinase family member 4; LUNG, b | 100.0 | |
| 3coi_A | 353 | Mitogen-activated protein kinase 13; P38D, P38delt | 100.0 | |
| 4e7w_A | 394 | Glycogen synthase kinase 3; GSK3, PTyr195, transfe | 100.0 | |
| 3p86_A | 309 | Serine/threonine-protein kinase CTR1; ETR1, ERS1, | 100.0 | |
| 1nxk_A | 400 | MAP kinase-activated protein kinase 2; MK2, phosph | 100.0 | |
| 2i6l_A | 320 | Mitogen-activated protein kinase 6; MAPK6, ERK3, e | 100.0 | |
| 1wak_A | 397 | Serine/threonine-protein kinase SPRK1; SRPK, trans | 100.0 | |
| 3c4z_A | 543 | Rhodopsin kinase; Ser/Thr kinase, RGS homology dom | 100.0 | |
| 2w5a_A | 279 | Serine/threonine-protein kinase NEK2; Ser/Thr prot | 100.0 | |
| 3i6u_A | 419 | CDS1, serine/threonine-protein kinase CHK2; Ser/Th | 100.0 | |
| 4eqm_A | 294 | Protein kinase; transferase; HET: ANP; 3.00A {Stap | 100.0 | |
| 3eqc_A | 360 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 2vgo_A | 284 | Serine/threonine-protein kinase 12-A; nucleotide-b | 100.0 | |
| 2j7t_A | 302 | Serine/threonine-protein kinase 10; transferase, A | 100.0 | |
| 3lm5_A | 327 | Serine/threonine-protein kinase 17B; STK17B, serin | 100.0 | |
| 3cok_A | 278 | Serine/threonine-protein kinase PLK4; POLO-like ki | 100.0 | |
| 3e3p_A | 360 | Protein kinase, putative glycogen synthase kinase; | 100.0 | |
| 1blx_A | 326 | Cyclin-dependent kinase 6; inhibitor protein, cycl | 100.0 | |
| 2h6d_A | 276 | 5'-AMP-activated protein kinase catalytic subunit | 100.0 | |
| 3rgf_A | 405 | Cyclin-dependent kinase 8; protein kinase complex, | 100.0 | |
| 1z57_A | 339 | Dual specificity protein kinase CLK1; protein tyro | 100.0 | |
| 3nsz_A | 330 | CK II alpha, casein kinase II subunit alpha; inhib | 100.0 | |
| 2vx3_A | 382 | Dual specificity tyrosine-phosphorylation- regula | 100.0 | |
| 2owb_A | 335 | Serine/threonine-protein kinase PLK1; catalytic do | 100.0 | |
| 2rku_A | 294 | Serine/threonine-protein kinase PLK1; structure of | 100.0 | |
| 3pg1_A | 362 | Mitogen-activated protein kinase, putative (MAP K | 100.0 | |
| 3byv_A | 377 | Rhoptry kinase; malaria, transferase, structural g | 100.0 | |
| 2ycf_A | 322 | Serine/threonine-protein kinase CHK2; transferase, | 100.0 | |
| 1vzo_A | 355 | Ribosomal protein S6 kinase alpha 5; protein kinas | 100.0 | |
| 2wei_A | 287 | Calmodulin-domain protein kinase 1, putative; nucl | 100.0 | |
| 3com_A | 314 | Serine/threonine-protein kinase 4; MST1, STE20-lik | 100.0 | |
| 3q60_A | 371 | ROP5B; pseudokinase, transferase; HET: ATP; 1.72A | 100.0 | |
| 4euu_A | 319 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 2i4l_A | 458 | Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseud | 100.0 | |
| 2eu9_A | 355 | Dual specificity protein kinase CLK3; kinase domai | 100.0 | |
| 3kul_A | 325 | Ephrin type-A receptor 8; ATP-binding, kinase, nuc | 100.0 | |
| 3a7i_A | 303 | MST3 kinase, serine/threonine kinase 24 (STE20 hom | 100.0 | |
| 3s95_A | 310 | LIMK-1, LIM domain kinase 1; structural genomics, | 100.0 | |
| 3vhe_A | 359 | Vascular endothelial growth factor receptor 2; kin | 100.0 | |
| 2wtk_C | 305 | Serine/threonine-protein kinase 11; transferase-me | 100.0 | |
| 3ugc_A | 295 | Tyrosine-protein kinase JAK2; small molecule inhib | 100.0 | |
| 2psq_A | 370 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2vwi_A | 303 | Serine/threonine-protein kinase OSR1; STE kinase, | 100.0 | |
| 2x7f_A | 326 | TRAF2 and NCK-interacting protein kinase; serine/t | 100.0 | |
| 2pml_X | 348 | PFPK7, Ser/Thr protein kinase; phosphorylati trans | 100.0 | |
| 3l9p_A | 367 | Anaplastic lymphoma kinase; kinase domain, ATP-bin | 100.0 | |
| 3cek_A | 313 | Dual specificity protein kinase TTK; HMPS1, PYT, E | 100.0 | |
| 2dyl_A | 318 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| 3lb7_A | 307 | RAF proto-oncogene serine/threonine-protein kinas; | 100.0 | |
| 4hcu_A | 269 | Tyrosine-protein kinase ITK/TSK; transferase-trans | 100.0 | |
| 1q8y_A | 373 | SR protein kinase; transferase; HET: ADP ADE; 2.05 | 100.0 | |
| 2izr_A | 330 | Casein kinase I isoform gamma-3; serine/threonine- | 100.0 | |
| 3sxs_A | 268 | Cytoplasmic tyrosine-protein kinase BMX; transfera | 100.0 | |
| 1luf_A | 343 | Muscle-specific tyrosine kinase receptor MUSK; pho | 100.0 | |
| 3kmu_A | 271 | ILK, integrin-linked kinase; cell adhesion, ANK re | 100.0 | |
| 2clq_A | 295 | Mitogen-activated protein kinase kinase kinase 5; | 100.0 | |
| 3qup_A | 323 | Tyrosine-protein kinase receptor TYRO3; protein ki | 100.0 | |
| 1csn_A | 298 | Casein kinase-1; phosphotransferase; HET: ATP; 2.0 | 100.0 | |
| 3gen_A | 283 | Tyrosine-protein kinase BTK; bruton'S tyrosine kin | 100.0 | |
| 3cbl_A | 377 | C-FES, proto-oncogene tyrosine-protein kinase FES/ | 100.0 | |
| 3aln_A | 327 | Dual specificity mitogen-activated protein kinase; | 100.0 | |
| 4e5w_A | 302 | Tyrosine-protein kinase JAK1; kinase domain, trans | 100.0 | |
| 4fvq_A | 289 | Tyrosine-protein kinase JAK2; janus protein kinase | 100.0 | |
| 1mp8_A | 281 | Focal adhesion kinase 1; tyrosine protein kinase, | 100.0 | |
| 3op5_A | 364 | Serine/threonine-protein kinase VRK1; adenosine tr | 100.0 | |
| 2h34_A | 309 | Serine/threonine-protein kinase PKNE; apoenzyme, t | 100.0 | |
| 4f0f_A | 287 | Serine/threonine-protein kinase ROCO4; LRRK2, ATP- | 100.0 | |
| 2iwi_A | 312 | Serine/threonine-protein kinase PIM-2; nucleotide- | 100.0 | |
| 2ivs_A | 314 | Proto-oncogene tyrosine-protein kinase receptor RE | 100.0 | |
| 3a99_A | 320 | Proto-oncogene serine/threonine-protein kinase PI; | 100.0 | |
| 3poz_A | 327 | Epidermal growth factor receptor; kinase domain, a | 100.0 | |
| 3dtc_A | 271 | Mitogen-activated protein kinase kinase kinase 9; | 100.0 | |
| 2a19_B | 284 | Interferon-induced, double-stranded RNA-activated | 100.0 | |
| 1rjb_A | 344 | FL cytokine receptor; kinase, structure, autoinhib | 100.0 | |
| 3tt0_A | 382 | Basic fibroblast growth factor receptor 1; kinase | 100.0 | |
| 1xbb_A | 291 | Tyrosine-protein kinase SYK; gleevec, STI-571, ima | 100.0 | |
| 2wqm_A | 310 | Serine/threonine-protein kinase NEK7; ATP-binding, | 100.0 | |
| 1t46_A | 313 | HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom | 100.0 | |
| 2xir_A | 316 | Vascular endothelial growth factor receptor 2; ang | 100.0 | |
| 3kex_A | 325 | Receptor tyrosine-protein kinase ERBB-3; kinase do | 100.0 | |
| 3og7_A | 289 | AKAP9-BRAF fusion protein; proto-oncogene, V600E, | 100.0 | |
| 1k9a_A | 450 | Carboxyl-terminal SRC kinase; COOH-terminal SRC ki | 100.0 | |
| 1qcf_A | 454 | Haematopoetic cell kinase (HCK); tyrosine kinase-i | 100.0 | |
| 3fhr_A | 336 | MAP kinase-activated protein kinase 3; kinase-inhi | 100.0 | |
| 2qol_A | 373 | Ephrin receptor; receptor tyrosine kinase, juxtame | 100.0 | |
| 1p4o_A | 322 | Insulin-like growth factor I receptor protein; IGF | 100.0 | |
| 3p23_A | 432 | Serine/threonine-protein kinase/endoribonuclease; | 100.0 | |
| 2eva_A | 307 | TAK1 kinase - TAB1 chimera fusion protein; transfe | 100.0 | |
| 2v62_A | 345 | Serine/threonine-protein kinase VRK2; transferase, | 100.0 | |
| 3uzp_A | 296 | CKI-delta, CKID, casein kinase I isoform delta; CK | 100.0 | |
| 3kfa_A | 288 | Tyrosine-protein kinase ABL1; CML, drug resistance | 100.0 | |
| 3t9t_A | 267 | Tyrosine-protein kinase ITK/TSK; kinase domain, al | 100.0 | |
| 3soc_A | 322 | Activin receptor type-2A; structural genomics cons | 100.0 | |
| 3q4u_A | 301 | Activin receptor type-1; structural genomics conso | 100.0 | |
| 3lxl_A | 327 | Tyrosine-protein kinase JAK3; TYK2, inflammation, | 100.0 | |
| 1hc7_A | 477 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 100.0 | |
| 3brb_A | 313 | Proto-oncogene tyrosine-protein kinase MER; ATP-bi | 100.0 | |
| 2i1m_A | 333 | Macrophage colony-stimulating factor 1 receptor; k | 100.0 | |
| 1fvr_A | 327 | Tyrosine-protein kinase TIE-2; tyrosine kinase, tr | 100.0 | |
| 3pls_A | 298 | Macrophage-stimulating protein receptor; protein k | 100.0 | |
| 4hgt_A | 296 | Casein kinase I isoform delta; CK1D, inhibitor, tr | 100.0 | |
| 2jii_A | 352 | Serine/threonine-protein kinase VRK3 molecule: VA | 100.0 | |
| 1mqb_A | 333 | Ephrin type-A receptor 2; tyrosine protein kinase, | 100.0 | |
| 3ll6_A | 337 | Cyclin G-associated kinase; transferase, protein k | 100.0 | |
| 2pvf_A | 334 | Fibroblast growth factor receptor 2; kinase domain | 100.0 | |
| 2yfx_A | 327 | Tyrosine-protein kinase receptor; nucleotide-bindi | 100.0 | |
| 3cc6_A | 281 | Protein tyrosine kinase 2 beta; focal adhesion kin | 100.0 | |
| 2buj_A | 317 | Serine/threonine-protein kinase 16; transferase, A | 100.0 | |
| 3f66_A | 298 | Hepatocyte growth factor receptor; C-Met, protein | 100.0 | |
| 3lzb_A | 327 | Epidermal growth factor receptor; epidermal growth | 100.0 | |
| 1u59_A | 287 | Tyrosine-protein kinase ZAP-70; transferase; HET: | 100.0 | |
| 1opk_A | 495 | P150, C-ABL, proto-oncogene tyrosine-protein kinas | 100.0 | |
| 1qpc_A | 279 | LCK kinase; alpha beta fold, transferase; HET: PTR | 100.0 | |
| 1byg_A | 278 | CSK, protein (C-terminal SRC kinase); protein kina | 100.0 | |
| 3lxp_A | 318 | Non-receptor tyrosine-protein kinase TYK2; JAK3, i | 100.0 | |
| 2rio_A | 434 | Serine/threonine-protein kinase/endoribonuclease I | 100.0 | |
| 3c1x_A | 373 | Hepatocyte growth factor receptor; receptor tyrosi | 100.0 | |
| 1fmk_A | 452 | C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros | 100.0 | |
| 4fl3_A | 635 | Tyrosine-protein kinase SYK; transferase; HET: ANP | 100.0 | |
| 2qkw_B | 321 | Protein kinase; three-helix bundle motif, AVRPTO-P | 100.0 | |
| 4eut_A | 396 | Serine/threonine-protein kinase TBK1; ATP binding, | 100.0 | |
| 1u46_A | 291 | ACK-1, activated CDC42 kinase 1; tyrosine kinase, | 100.0 | |
| 2w1i_A | 326 | JAK2; chromosomal rearrangement, nucleotide-bindin | 100.0 | |
| 3uim_A | 326 | Brassinosteroid insensitive 1-associated receptor; | 100.0 | |
| 3g2f_A | 336 | Bone morphogenetic protein receptor type-2; kinase | 100.0 | |
| 2ozo_A | 613 | Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t | 100.0 | |
| 2h8h_A | 535 | Proto-oncogene tyrosine-protein kinase SRC; SRC ki | 100.0 | |
| 3mdy_A | 337 | Bone morphogenetic protein receptor type-1B; compl | 100.0 | |
| 2y4i_B | 319 | KSR2, HKSR2, kinase suppressor of RAS 2; transfera | 100.0 | |
| 1nj8_A | 459 | Proline-tRNA synthetase, proline--tRNA ligase; cla | 100.0 | |
| 3a32_A | 471 | Probable threonyl-tRNA synthetase 1; aeropyrum per | 100.0 | |
| 2nru_A | 307 | Interleukin-1 receptor-associated kinase 4; inhibi | 100.0 | |
| 3sv0_A | 483 | Casein kinase I-like; typical kinase domain fold, | 100.0 | |
| 3e7e_A | 365 | HBUB1, BUB1A, mitotic checkpoint serine/threonine- | 100.0 | |
| 3m2w_A | 299 | MAP kinase-activated protein kinase 2; small molec | 100.0 | |
| 2j0j_A | 656 | Focal adhesion kinase 1; cell migration, FERM, tra | 100.0 | |
| 1b6c_B | 342 | TGF-B superfamily receptor type I; complex (isomer | 100.0 | |
| 1nyr_A | 645 | Threonyl-tRNA synthetase 1; ATP, threonine, ligase | 100.0 | |
| 2vuw_A | 336 | Serine/threonine-protein kinase haspin; cell cycle | 100.0 | |
| 1qf6_A | 642 | THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, m | 100.0 | |
| 3qa8_A | 676 | MGC80376 protein; kinase ubiquitin-like domain, ph | 100.0 | |
| 3gxj_A | 303 | TGF-beta receptor type-1; ALK5, kinase, inhibitor, | 100.0 | |
| 3dzo_A | 413 | Rhoptry kinase domain; parasitic disease, transfer | 100.0 | |
| 3uh0_A | 460 | Threonyl-tRNA synthetase, mitochondrial; threonine | 100.0 | |
| 1nj1_A | 501 | PROR, proline-tRNA synthetase, proline--tRNA ligas | 100.0 | |
| 2pzi_A | 681 | Probable serine/threonine-protein kinase PKNG; ATP | 100.0 | |
| 3uqc_A | 286 | Probable conserved transmembrane protein; structur | 100.0 | |
| 2zt5_A | 693 | Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP | 99.97 | |
| 1ati_A | 505 | Glycyl-tRNA synthetase; protein biosynthesis, liga | 99.96 | |
| 4hvc_A | 519 | Bifunctional glutamate/proline--tRNA ligase; ligas | 99.96 | |
| 4azs_A | 569 | Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15 | 99.95 | |
| 3ial_A | 518 | Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 99.94 | |
| 3en9_A | 540 | Glycoprotease, O-sialoglycoprotein endopeptidase/p | 99.88 | |
| 1zar_A | 282 | RIO2 kinase; serine kinase, winged-helix, RIO doma | 99.84 | |
| 3ikl_A | 459 | DNA polymerase subunit gamma-2, mitochondrial; tra | 99.81 | |
| 1g5h_A | 454 | Mitochondrial DNA polymerase accessory subunit; in | 99.81 | |
| 1zth_A | 258 | RIO1 serine protein kinase; ribosome biogenesis, r | 99.76 | |
| 4gyi_A | 397 | RIO2 kinase; protein kinase, ADP complex, phosphoa | 99.56 | |
| 2dq3_A | 425 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 99.52 | |
| 1nnh_A | 294 | Asparaginyl-tRNA synthetase-related peptide; struc | 99.44 | |
| 2dq0_A | 455 | Seryl-tRNA synthetase; coiled-coil, homodimer, str | 99.39 | |
| 1ses_A | 421 | Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A | 99.37 | |
| 3dsq_A | 288 | Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-t | 99.33 | |
| 2ebm_A | 128 | RWD domain-containing protein 1; alpha+beta sandwi | 99.33 | |
| 2cja_A | 522 | Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE | 99.29 | |
| 2day_A | 128 | Ring finger protein 25; ligase, metal-binding, UB1 | 99.27 | |
| 2yz0_A | 138 | Serine/threonine-protein kinase GCN2; A-B-B-B-B-A- | 99.26 | |
| 1ukx_A | 137 | GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple | 99.23 | |
| 2ebk_A | 128 | RWD domain-containing protein 3; alpha+beta sandwi | 99.22 | |
| 3vbb_A | 522 | Seryl-tRNA synthetase, cytoplasmic; coiled-coil, l | 99.14 | |
| 3qtc_A | 290 | Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthet | 99.12 | |
| 1wle_A | 501 | Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bo | 99.06 | |
| 3tm0_A | 263 | Aminoglycoside 3'-phosphotransferase; protein kina | 99.02 | |
| 3lss_A | 484 | Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, | 99.01 | |
| 1v95_A | 130 | Nuclear receptor coactivator 5; coactivator indepe | 99.01 | |
| 2dax_A | 152 | Protein C21ORF6; RWD domain, alpha+beta sandwich f | 98.94 | |
| 3qne_A | 485 | Seryl-tRNA synthetase, cytoplasmic; amino acid bio | 98.94 | |
| 2daw_A | 154 | RWD domain containing protein 2; alpha+beta sandwi | 98.88 | |
| 3err_A | 536 | Fusion protein of microtubule binding domain from | 98.88 | |
| 1nd4_A | 264 | Aminoglycoside 3'-phosphotransferase; protein kina | 98.87 | |
| 1x54_A | 434 | Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthe | 98.73 | |
| 3dxp_A | 359 | Putative acyl-COA dehydrogenase; protein kinase-li | 98.73 | |
| 1wyd_A | 429 | Hypothetical aspartyl-tRNA synthetase; archaea, LI | 98.66 | |
| 1n9w_A | 422 | Aspartyl-tRNA synthetase 2; biosynthetic protein; | 98.6 | |
| 1eov_A | 487 | ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA sy | 98.44 | |
| 3mf2_A | 346 | BLL0957 protein; aminoacyl-tRNA synthetase, seryl- | 98.42 | |
| 3sg8_A | 304 | APH(2'')-ID; antibiotic resistance enzyme, transfe | 98.33 | |
| 3a74_A | 493 | Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, | 98.18 | |
| 3r70_A | 320 | Aminoglycoside phosphotransferase; structural geno | 98.17 | |
| 3tdw_A | 306 | Gentamicin resistance protein; kinase, phosphoryl | 97.92 | |
| 1e1o_A | 504 | Lysyl-tRNA synthetase, heat inducible; ligase, ami | 97.9 | |
| 1b7y_A | 350 | Phers, protein (phenylalanyl-tRNA synthetase); enz | 97.9 | |
| 3l4g_A | 508 | Phenylalanyl-tRNA synthetase alpha chain; aminoacy | 97.88 | |
| 4gkh_A | 272 | Aminoglycoside 3'-phosphotransferase APHA1-IAB; py | 97.85 | |
| 2olc_A | 397 | MTR kinase, methylthioribose kinase; kinase ADP-2H | 97.8 | |
| 3ovc_A | 362 | Hygromycin-B 4-O-kinase; aminoglycoside phosphotra | 97.66 | |
| 3a5y_A | 345 | GENX, putative lysyl-tRNA synthetase; aminoacyl-tR | 97.66 | |
| 3d1u_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 97.63 | |
| 2du3_A | 534 | O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l | 97.61 | |
| 2xgt_A | 435 | Asparaginyl-tRNA synthetase, cytoplasmic; ligase, | 97.46 | |
| 3nem_A | 438 | Aspartyl-tRNA synthetase; rossmann fold, OB fold, | 97.39 | |
| 2du7_A | 549 | O-phosphoseryl-tRNA synthetase; alpha4 tetramer, l | 97.36 | |
| 2q83_A | 346 | YTAA protein; 2635576, structural genomics, joint | 97.28 | |
| 3ats_A | 357 | Putative uncharacterized protein; hypothetical pro | 97.24 | |
| 1c0a_A | 585 | Aspartyl tRNA synthetase; protein-RNA complex, lig | 97.21 | |
| 1l0w_A | 580 | Aspartyl-tRNA synthetase; space-grown crystal, dim | 97.19 | |
| 2yle_A | 229 | Protein spire homolog 1; actin-binding protein, ac | 97.14 | |
| 2rhq_A | 294 | Phenylalanyl-tRNA synthetase alpha chain; heterote | 96.98 | |
| 3m4p_A | 456 | Ehasnrs, asparaginyl-tRNA synthetase, putative; am | 96.94 | |
| 2pyw_A | 420 | Uncharacterized protein; 5-methylthioribose kinase | 96.9 | |
| 4ex5_A | 529 | Lysine--tRNA ligase; structural genomics, niaid, n | 96.84 | |
| 3pco_A | 327 | Phenylalanyl-tRNA synthetase, alpha subunit; amino | 96.83 | |
| 3bju_A | 521 | Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, | 96.82 | |
| 2odr_B | 648 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 96.78 | |
| 2odr_A | 665 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 96.77 | |
| 2odr_D | 685 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 96.77 | |
| 2odr_C | 701 | Phosphoseryl-tRNA synthetase; phosphoserine tRNA s | 96.73 | |
| 3ig2_A | 213 | Phenylalanyl-tRNA synthetase beta chain; phers, MC | 96.73 | |
| 4ah6_A | 617 | Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo | 96.66 | |
| 3ica_A | 213 | Phenylalanyl-tRNA synthetase beta chain; APC61692. | 96.55 | |
| 3i7f_A | 548 | Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-bi | 96.28 | |
| 3dxq_A | 301 | Choline/ethanolamine kinase family protein; NP_106 | 96.24 | |
| 3l4g_B | 589 | Phenylalanyl-tRNA synthetase beta chain; aminoacyl | 95.97 | |
| 3jr1_A | 312 | Putative fructosamine-3-kinase; YP_719053.1, struc | 95.97 | |
| 3f7w_A | 288 | Putative fructosamine-3-kinase; YP_290396.1, struc | 95.79 | |
| 3csv_A | 333 | Aminoglycoside phosphotransferase; YP_614837.1, ph | 95.75 | |
| 2ppq_A | 322 | HSK, HK, homoserine kinase; structural genomics, M | 95.55 | |
| 1zyl_A | 328 | Hypothetical protein YIHE; putative protein kinase | 95.42 | |
| 3c5i_A | 369 | Choline kinase; choline, kinase, malaria, transfer | 95.24 | |
| 3feg_A | 379 | Choline/ethanolamine kinase; non-protein kinase, c | 95.2 | |
| 1nw1_A | 429 | Choline kinase (49.2 KD); phospholipid synthesis, | 95.0 | |
| 2rhq_B | 795 | Phenylalanyl-tRNA synthetase beta chain; heterotet | 94.86 | |
| 2qg7_A | 458 | Ethanolamine kinase PV091845; malaria, SGC, struct | 94.25 | |
| 3i1a_A | 339 | Spectinomycin phosphotransferase; protein kinase, | 93.75 | |
| 1b7y_B | 785 | Phers, protein (phenylalanyl-tRNA synthetase); enz | 93.27 | |
| 3f2s_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 91.48 | |
| 3cmq_A | 415 | Phenylalanyl-tRNA synthetase, mitochondrial; class | 90.59 | |
| 3mes_A | 424 | Choline kinase; malaria, structural genomics, stru | 89.14 | |
| 3g15_A | 401 | CK, chetk-alpha, choline kinase alpha; non-protein | 85.32 | |
| 3pco_B | 795 | Phenylalanyl-tRNA synthetase, beta chain; aminoacy | 83.94 |
| >4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-69 Score=654.99 Aligned_cols=429 Identities=25% Similarity=0.424 Sum_probs=359.0
Q ss_pred cCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 711 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 711 ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
+-+.|+|++||+|.++.++++|++.++++|++|||++|.||+| ++.++..+..++||+|.|++|+.++||||+|+|
T Consensus 66 ~l~~P~G~~D~lP~~~~~~~~ie~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~ge~~~~my~f~D~~g~~l~LRPd~T~~ 145 (517)
T 4g85_A 66 VLKTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVP 145 (517)
T ss_dssp CCCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHHCC------CSCBBCCTTSCCEEECSCSHHH
T ss_pred eeeCCCCCCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhhcccCcCcceeEEEECCCCCEEEeCCcCcHH
Confidence 3478999999999999999999999999999999999999999 444554444678999999999999999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeEEcCCCC---CCCCceeEeEEEEeCCCCc-ccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 787 FIRWAISNQKSSFKRYEISSVYRRAIGH---SPPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 787 iaR~~~~~~~~P~r~~Y~g~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~-~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
+||++++|+..|+|+||+|+|||+|+|+ +|.|||+|+|+|+||..++ .+|+|+|.++.++|+.+|+.+ +.++|||
T Consensus 146 ~aR~~~~~~~~p~k~yyig~vfR~Erp~~~~GR~ReF~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~in~ 224 (517)
T 4g85_A 146 FARYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGD-FLVKVND 224 (517)
T ss_dssp HHHHHHHTTCSCEEEEEEEEEECCCC-------CCEEEEEEEEEESCCCTTHHHHHHHHHHHHHHHHHCCCC-EEEEEEE
T ss_pred HHHHHHhCCCCCceeEEEeceEeccCcccccCccceeeeeceeccCCccchHHHHHHHHHHHHHHHhhcCCc-ccccccc
Confidence 9999999988899999999999999984 4556799999999998765 689999999999999999986 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|+++++.+.+..+++++| +.++++++++++...+++++.++.+..++ ...|.. +.++.
T Consensus 225 ~~~l~~~~~~~~~~~~~~~~~~~~ld~ld---------k~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~g~~-~~~~~ 293 (517)
T 4g85_A 225 RRILDGMFAICGVSDSKFRTICSSVDKLD---------KVSWEEVKNEMVGEKGLAPEVADRIGDYV-QQHGGV-SLVEQ 293 (517)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHTTT---------TSCHHHHHHHHHHHTCCCHHHHHHHHHHH-HCCBSH-HHHHH
T ss_pred hhhHHHHHHhhcchHHHHHHHHHHHhhhc---------chhHHHHHHHHHhhcCCCHHHHHHHHHHH-HhcCCc-hHHHH
Confidence 99999999999999999999999998887 55678888899988999999999999888 456653 33443
Q ss_pred Hhc--cCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcc--cccccceeccccc
Q 001059 943 LRG--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPA--TLVEGTLLAVGGR 1013 (1170)
Q Consensus 943 l~~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~--~~~~~~~I~~GGR 1013 (1170)
+.. .+..+....++++++ +++.+|+..+|.||++++||++||||+|||++..+.+... .....++||+|||
T Consensus 294 ~~~~~~~~~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~d~~lvrgldYYtG~vFE~~~~~~~~~~~~~~~~~~~i~~GGR 373 (517)
T 4g85_A 294 LLQDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGR 373 (517)
T ss_dssp HHHCHHHHTCHHHHHHHHHHHHHHHHHHHHTCGGGEEECTTCCCCTTTCSSEEEEEEEC-------------CCSEEEEE
T ss_pred HHhcccccccHHHHHHHHHHHHHHHHHHhhCCCcceeeccccccCCcccCCeEEEEEECCcccccccCCcccceecCCCc
Confidence 332 123455566666666 7888999999999999999999999999999987654311 1122358999999
Q ss_pred cchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH
Q 001059 1014 YDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1090 (1170)
Q Consensus 1014 YD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~ 1090 (1170)
||+|++.|+. ++.++||||||+|+|||+.+|++. ........+++|+|++.+ +....+|+++++.||+
T Consensus 374 YD~Lv~~f~~--------~G~~~pavGfa~gierl~~~le~~~~~~~~~~~~~~~~V~v~~~~-~~~~~~a~~l~~~Lr~ 444 (517)
T 4g85_A 374 YDGLVGMFDP--------KGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQ-KKLLEERLKLVSELWD 444 (517)
T ss_dssp CHHHHHTTSS--------SCCCCCEEEEEECHHHHHHHHHHHHHHTTCCCCSCCCCEEEEESS-SSCHHHHHHHHHHHHH
T ss_pred hhHHHHHhcc--------CCCCCCcccccchHHHHHHHHHHhccccCccccCCCCEEEEEeCC-HHHHHHHHHHHHHHHH
Confidence 9999998842 234679999999999999988632 222334567899999986 7788999999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1091 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1091 ~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
.|++|++++..++++++++++|++.||+|+||||++|+++|+|+||||.+|+|.+|++++++++|++.++
T Consensus 445 ~Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~ 514 (517)
T 4g85_A 445 AGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTG 514 (517)
T ss_dssp TTCCEEECSSSSCCHHHHHHHHHHHCCCEEEEECHHHHHTTEEEEEETTTCCEEEEEHHHHHHHHHHHCC
T ss_pred CCCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECChhHhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhc
Confidence 9999998876567899999999999999999999999999999999999999999999999999998764
|
| >3net_A Histidyl-tRNA synthetase; aminoacyl-tRNA synthetase, ligase, structural genomics, PSI- nostoc, protein structure initiative; 2.70A {Nostoc SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-69 Score=649.20 Aligned_cols=412 Identities=15% Similarity=0.208 Sum_probs=353.6
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccccc-eEEEecc---C-----------
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRN-TVKLLTH---G----------- 773 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~-my~f~D~---~----------- 773 (1170)
+.|+|++|++|.++.+++++++.++++|++|||++|.||+| .+..+| +..++ ||+|.|+ +
T Consensus 13 ~~p~G~~D~lP~~~~~~~~i~~~l~~~~~~~Gy~~i~tP~~E~~~~~~~~G-~~~ke~m~~~~d~~~~g~~~~~~~~~~~ 91 (465)
T 3net_A 13 STPSGFPEFLPSEKRLELYLLDTIRRVYESYGFTPIETPAVERLEVLQAKG-NQGDNIIYGLEPILPPNRQAEKDKSGDT 91 (465)
T ss_dssp SCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHGGG-CC--CBEEEEEEEC--------------
T ss_pred cCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHHhccC-CCCccceEEEecccccccccccccccCC
Confidence 57899999999999999999999999999999999999999 333335 45678 9999999 3
Q ss_pred -CceeeecCCCCHHHHHHHHhCC---CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCccc--HHHHHHHHHHH
Q 001059 774 -GDLLELSHELRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALT--EAEVLKVTMDI 846 (1170)
Q Consensus 774 -G~~laLRPD~T~~iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~a--DaEvi~la~~~ 846 (1170)
|+.++||||+|+|+||+++++. ..|+|+||+|+|||+|+||.++ |||+|+|+|+||.+++.+ |+|||.++.++
T Consensus 92 ~g~~l~LRpd~T~~~aR~~~~~~~~~~~p~r~~y~g~vfR~e~~~~gr~Ref~Q~g~ei~G~~~~~a~~DaEvi~l~~~~ 171 (465)
T 3net_A 92 GSEARALKFDQTVPLAAYIARHLNDLTFPFARYQMDVVFRGERAKDGRFRQFRQCDIDVVGREKLSLLYDAQMPAIITEI 171 (465)
T ss_dssp --CCEEECSCSHHHHHHHHHHHGGGSCSSEEEEECCEEECBC------CCEEEEEEEEEECSSCCCHHHHHHHHHHHHHH
T ss_pred CCCEEEeCCCChHHHHHHHHhcccccCCCeEEEEeccEEecCCCCCCCcceeEEeeEEEECCCCccchhhHHHHHHHHHH
Confidence 8999999999999999999864 3699999999999999988655 569999999999999999 99999999999
Q ss_pred HHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHH
Q 001059 847 VTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQ 926 (1170)
Q Consensus 847 l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 926 (1170)
|+.+|+.+ ++|+|||+++++++++.+|++++++..+++++++++ +.++++++.++. +.+++.+.++.+.
T Consensus 172 l~~lgl~~-~~i~in~~~~l~~~l~~~g~~~~~~~~~~~~ld~~~---------~~~~~~~~~~l~-~~~l~~~~~~~l~ 240 (465)
T 3net_A 172 FEAVNIGD-FVIRINNRKVLTGFFQSLNISETQIKSCISIIDNLE---------KIGEAKVKLELE-KEGINPEQTQKII 240 (465)
T ss_dssp HHHHTCSC-EEEEEEEHHHHHHHHHHTTCCHHHHHHHHHHHTTHH---------HHHHHHHHHHHH-HTTCCHHHHHHHH
T ss_pred HHHcCCCc-eEEEECCHHHHHHHHHHcCCCHHHHHHHHHHHHhcc---------ccCHHHHHHHHH-hcCCCHHHHHHHH
Confidence 99999985 999999999999999999999998888888888877 567777766555 5899999999999
Q ss_pred HHHHHhcCChhhHHHHHhccC---CCChhHHHHHHHH--H-HHHccCcce----EEEccCCCCCCCcccceEEEEEeccC
Q 001059 927 TVGLRFCGAADQALPRLRGAL---PADKPTRKALDEL--Y-LRIWRIEKN----IYIDALMPPIESYHRNLFFQVFSVKE 996 (1170)
Q Consensus 927 ~l~~~~~g~~~~~l~~l~~~~---~~~~~~~~~l~~L--~-l~~~g~~~~----i~~Dl~lvrgldYYtG~VFe~~~~~~ 996 (1170)
.++ .+.|+..++++++++++ ..++.+.+++++| . ++.+ +..+ +.||++++||++||||+|||+|..+.
T Consensus 241 ~l~-~~~g~~~~~l~~l~~~~~~~~~~~~~~~~l~~l~~~~l~~~-~~~~~~~~~~~D~~lvrgldYYtG~vFe~~~~~~ 318 (465)
T 3net_A 241 DFV-KIDGSVDDVLDKLKHLSQTLPESEQFNLGVSELETVITGVR-NLGVPDKRFCIDLAIARGLNYYTGTVYETTLIGH 318 (465)
T ss_dssp HHH-TCCSCHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHH-HTTCCGGGEEECTTCCCCSSSEEEEEEEEEETTC
T ss_pred HHH-HhcCChHHHHHHHHHhhhccccChHHHHHHHHHHHHHHHHh-cccccCceEEEccCccCCCcccCceEEEEEECCC
Confidence 998 68898888999999875 7788888999888 3 4555 5446 99999999999999999999998763
Q ss_pred CCcccccccceeccccccchhhhhc-ccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCC-CCCCceEEEEEcCC
Q 001059 997 KYPATLVEGTLLAVGGRYDYLLHRM-WDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVR-NEAGTSVLVCSRGG 1074 (1170)
Q Consensus 997 ~~~~~~~~~~~I~~GGRYD~L~~~f-g~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~-~~~~~~vlv~~~~~ 1074 (1170)
+ .+++||+|||||+|+++| |+ ++||||||||+|||+.+|.+....+. ...+.+|+|++.+
T Consensus 319 ~------~~~~i~~GGRYD~L~~~f~g~-----------~~pavGfaiGieRli~~L~e~g~~p~~~~~p~~V~Vi~~~- 380 (465)
T 3net_A 319 E------ALGSICSGGRYEELVGTFIGE-----------KMPGVGISIGLTRLISRLLKAGILNTLPPTPAQVVVVNMQ- 380 (465)
T ss_dssp G------GGCCSSEEEEESSSSGGGTCS-----------CCCEEEEEEEHHHHHHHHHHTTSSCCCCSCSCCEEECCSC-
T ss_pred C------ccceecccccHHHHhhhhcCC-----------CCceeeeeccHHHHHHHHHHcCCCCCcCCCCCeEEEEEcC-
Confidence 2 345899999999998876 43 26999999999999998864332222 3567899999885
Q ss_pred CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCC-eEEEEEcCCCcccccchHHHHH
Q 001059 1075 GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKG-LVKVRHLDVKKEKEVQRESLVR 1153 (1170)
Q Consensus 1075 ~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~-~v~vk~l~~~eq~~v~~~~l~~ 1153 (1170)
++...+|++++++||+.|++|++++. ++++++++++|++.|+|++|+||++ +++| +|+||||.+++|..|+++++++
T Consensus 381 ~~~~~~A~~la~~LR~~Gi~ve~d~~-~~sl~~q~k~A~~~g~p~~iiiG~~-~~~g~~V~vk~~~t~eq~~v~~~el~~ 458 (465)
T 3net_A 381 DELMPTYLKVSQQLRQAGLNVITNFE-KRQLGKQFQAADKQGIRFCVIIGAD-EAAAQKSSLKDLQSGEQVEVALADLAE 458 (465)
T ss_dssp GGGHHHHHHHHHHHHHTTCCEEECCS-CCCHHHHHHHHHHHTCCEEEECCHH-HHHTTCCEEEETTTTEEEECC-CCHHH
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEeC-CCCHHHHHHHHHHcCCCEEEEECch-hhcCCEEEEEECCCCceEEeeHHHHHH
Confidence 67789999999999999999998876 6799999999999999999999999 9999 9999999999999999999999
Q ss_pred HHHHH
Q 001059 1154 FLLDA 1158 (1170)
Q Consensus 1154 ~l~~~ 1158 (1170)
+|++.
T Consensus 459 ~l~~~ 463 (465)
T 3net_A 459 EIKRR 463 (465)
T ss_dssp HHHHT
T ss_pred HHHHh
Confidence 88764
|
| >3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-69 Score=641.26 Aligned_cols=405 Identities=16% Similarity=0.185 Sum_probs=331.7
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
+.|+|++||+|.++.+++++++.++++|++|||++|.||+| .+..+ |+...++||+|.|++|+.++||||+|+|+
T Consensus 30 ~~p~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~lE~~el~~~~~G~~~~~~my~f~D~~g~~l~LRpd~T~~~ 109 (456)
T 3lc0_A 30 EPVQGCRDFPPEAMRCRRHLFDVFHATAKTFGFEEYDAPVLESEELYIRKAGEEITEQMFNFITKGGHRVALRPEMTPSL 109 (456)
T ss_dssp SCSTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGCCCSCCHHHHTCEEEECSSSCEEEECSCSHHHH
T ss_pred cCCCCCcccCHhHHHHHHHHHHHHHHHHHHCCCEEEECCcEeehhhhccccccchhhceEEEEcCCCCEEecCCcCHHHH
Confidence 57899999999999999999999999999999999999999 33333 66678999999999999999999999999
Q ss_pred HHHHHhCCC---CceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCC-cceEEEeCc
Q 001059 788 IRWAISNQK---SSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHA-ESCDIHLNH 862 (1170)
Q Consensus 788 aR~~~~~~~---~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~-~~~~i~lg~ 862 (1170)
||+++++.. .|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+.+|+. ++++|+|||
T Consensus 110 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~ReF~Q~g~ei~G~~~~~~DaEvi~l~~~~l~~lgl~~~~~~i~in~ 189 (456)
T 3lc0_A 110 ARLLLGKGRSLLLPAKWYSIPQCWRYEAITRGRRREHYQWNMDIVGVKSVSAEVELVCAACWAMRSLGLSSKDVGIKVNS 189 (456)
T ss_dssp HHHHHHSCTTCCSSEEEEECCEEECCCC-----CCEEEEEEEEEESCCSTHHHHHHHHHHHHHHHHTTCCTTTEEEEEEE
T ss_pred HHHHHhcCcccCCCEEEEEeccEEecCCCCCCCccceEEEEEEEEcCCChHhhHHHHHHHHHHHHHcCCCCCceEEEEcC
Confidence 999998753 499999999999999988554 569999999999999999999999999999999993 249999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
+++++++++.+|++++.+..++.++++++ +.+++++++.+ .+.+++++.++.+..++. +. .++.
T Consensus 190 ~~il~~~l~~~g~~~~~~~~v~~~idkl~---------~~~~~~~~~~L-~~~~l~~~~~~~l~~~~~-~~-----~~~~ 253 (456)
T 3lc0_A 190 RKVLQTVVEQAGVTSDKFAPVCVIVDKME---------KIPREEVEAQL-AVLGLEPTVVDAITTTLS-LK-----SIDE 253 (456)
T ss_dssp HHHHHHHHHHTTCCGGGHHHHHHHHTTTT---------TSCHHHHHHHH-HHTTCCHHHHHHHHHHHT-CC-----SHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHhc---------ccCHHHHHHHH-HHcCCCHHHHHHHHHHhc-cC-----CHHH
Confidence 99999999999999988888888888777 45567776554 447899999999988873 22 2444
Q ss_pred HhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhh
Q 001059 943 LRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHR 1020 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~ 1020 (1170)
+...+.......+.|.++ +++.+|+.+++.||++++||++||||+|||+|... +.+++||+|||||+|++.
T Consensus 254 l~~~l~~~~~~~~~L~~l~~~l~~~gi~~~~~~D~~lvRgldYYTG~vFE~~~~~-------g~~~~I~~GGRYD~Lv~~ 326 (456)
T 3lc0_A 254 IAQRVGEEHEAVKELRQFFEQVEAYGYGDWVLFDASVVRGLAYYTGIVFEGFDRE-------GKFRALCGGGRYDNLLTT 326 (456)
T ss_dssp HHHHHCTTCHHHHHHHHHHHHHHHHTCGGGEEECTTCCCSCTTCCSEEEEEEETT-------SCSSCSEEEEECSSHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHcCCCceEEEecCccCCccccCCeEEEEEECC-------CCcceEeecccHHHHHHH
Confidence 555444434445555555 77889998889999999999999999999999642 234589999999999999
Q ss_pred cccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC
Q 001059 1021 MWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV 1100 (1170)
Q Consensus 1021 fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~ 1100 (1170)
||++ .++||||||+|+|||+.+|.+..........++++|++.+ ++...+|+++|+.||+.|++|++++.
T Consensus 327 fg~~---------~~~PavGFaig~eRl~~~l~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~la~~LR~~Gi~ve~~~~ 396 (456)
T 3lc0_A 327 YGSP---------TPIPCAGFGFGDCVIVELLQEKRLLPDIPHVVDDVVIPFD-ESMRPHALAVLRRLRDAGRSADIILD 396 (456)
T ss_dssp TTCS---------SCCCEEEEEEESSHHHHHHHHTTCCCCCCCCEEEEEEESS-GGGHHHHHHHHHHHHHTTCCEEECCS
T ss_pred hCCC---------CCCCEEEEEeEHHHHHHHHHhcCCCCccCCCCcEEEEEcC-HHHHHHHHHHHHHHHHCCCeEEEecC
Confidence 9764 1369999999999999988643222223345789999886 66788999999999999999998876
Q ss_pred CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHH
Q 001059 1101 PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESL 1151 (1170)
Q Consensus 1101 ~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l 1151 (1170)
.++++++++||++.|++++||+|++|+++|+|+||||.+|+|..+++++.
T Consensus 397 -~~slkkq~k~A~k~ga~~vviiGe~E~~~g~v~vK~l~tgeQ~~~~~~~~ 446 (456)
T 3lc0_A 397 -KKKVVQAFNYADRVGAVRAVLVAPEEWERGEVQVKMLREGTGKEEGGAER 446 (456)
T ss_dssp -CCCHHHHHHHHHHTTEEEEEEECHHHHHTTEEEEEECC------------
T ss_pred -CCCHHHHHHHHHHcCCCEEEEECCchhcCCeEEEEECCCCCeEEeccccc
Confidence 57899999999999999999999999999999999999999999988764
|
| >4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-68 Score=641.09 Aligned_cols=427 Identities=25% Similarity=0.427 Sum_probs=360.0
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
+.|+|++||+|.++.++++|++.++++|++|||++|.||+| .+.++..+..++||+|.|++|+.++||||+|+|+|
T Consensus 15 ~~p~G~~D~lP~~~~~~~~i~~~~~~~~~~~Gy~eI~tP~le~~el~~~~~g~~~~~~y~f~D~~g~~l~LRPd~T~~~a 94 (464)
T 4g84_A 15 KTPKGTRDYSPRQMAVREKVFDVIIRCFKRHGAEVIDTPVFELKETLMGKYGEDSKLIYDLKDQGGELLSLRYDLTVPFA 94 (464)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCC----CCCBBCCCSSCCEEECSCSHHHHH
T ss_pred eCCCCcCccCHHHHHHHHHHHHHHHHHHHHCCCeEEECcccCcHHHhccccCcCcceeEEEECCCCCEEEeCCcCcHHHH
Confidence 67999999999999999999999999999999999999999 44555444468899999999999999999999999
Q ss_pred HHHHhCCCCceeEEEecCeEEcCCCC---CCCCceeEeEEEEeCCCCc-ccHHHHHHHHHHHHHHcCCCcceEEEeCcHH
Q 001059 789 RWAISNQKSSFKRYEISSVYRRAIGH---SPPNRYLQGDFDIIGGASA-LTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 864 (1170)
Q Consensus 789 R~~~~~~~~P~r~~Y~g~VfR~e~~~---~~~~ef~Q~GvEiiG~~~~-~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~ 864 (1170)
|++++|+..|+|+||+|+|||+|+|+ +|.|||+|+|+|+||..++ .+|+|+|.++.++|+.+|+.+ +.++|||++
T Consensus 95 R~~~~~~~~p~k~~y~g~vfR~erp~~~~gR~Ref~Q~g~ei~G~~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~i~~~~ 173 (464)
T 4g84_A 95 RYLAMNKLTNIKRYHIAKVYRRDNPAMTRGRYREFYQCDFDIAGNFDPMIPDAECLKIMCEILSSLQIGD-FLVKVNDRR 173 (464)
T ss_dssp HHHHHTTCSCEEEEEEEEEECCCC------CCSEEEEEEEEEESCCSTTHHHHHHHHHHHHHHHHHTCCC-EEEEEEEHH
T ss_pred HHHHhcCCCCceeEEEecceeccCCccccCccceeeecceeccCCccchhhHHHHHHHHHHHHHHhCCCC-cceeecchh
Confidence 99999988899999999999999984 3556799999999998665 689999999999999999986 999999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHh
Q 001059 865 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLR 944 (1170)
Q Consensus 865 il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~ 944 (1170)
+++++++.++++++..+.+..++++++ +.++++++++++...+++++.++.+..++ ...|.. +.++.+.
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~l~~l~---------~~~~~~~~~~l~~~~~~~~~~~~~l~~~~-~~~g~~-~~~~~~~ 242 (464)
T 4g84_A 174 ILDGMFAICGVSDSKFRTICSSVDKLD---------KVSWEEVKNEMVGEKGLAPEVADRIGDYV-QQHGGV-SLVEQLL 242 (464)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHGGGG---------TSCHHHHHHHHHHTTCCCHHHHHHHHHHH-TCEESH-HHHHHHT
T ss_pred hHHHHHHhhcCcHHHHHHHHHHHHHhc---------hhhHHHHHHHHHhhcCCCHHHHHHHHHHH-HhcCCc-hHHHHHH
Confidence 999999999999999999989998887 45677888888888999999999998887 455553 3344332
Q ss_pred c--cCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcc--cccccceeccccccc
Q 001059 945 G--ALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPA--TLVEGTLLAVGGRYD 1015 (1170)
Q Consensus 945 ~--~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~--~~~~~~~I~~GGRYD 1015 (1170)
. .+..+....++++++ +++.+|+..+|.||++++||++||||+|||++..+.+... .....++||+|||||
T Consensus 243 ~~~~~~~~~~~~~~l~~l~~l~~~l~~~g~~~~i~~d~~lvrgldYYtG~vFe~~~~~~~~~~~~~~~~~~~i~~GGRYD 322 (464)
T 4g84_A 243 QDPKLSQNKQALEGLGDLKLLFEYLTLFGIDDKISFDLSLARGLDYYTGVIYEAVLLQTPAQAGEEPLGVGSVAAGGRYD 322 (464)
T ss_dssp TCHHHHTCHHHHHHHHHHHHHHHHHHHTTCGGGEEEETTCCCCTTTCSSEEEEEEEEECC-------EEEEEEEEEEECC
T ss_pred hcccccccHHHHHHHHHHHHHHhHHHhhCCCcceeecccccCCCcCcCCeEEEEEECCcccccccCCcccceeccCCchh
Confidence 2 122345555666666 7888999999999999999999999999999987654311 112235899999999
Q ss_pred hhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCC---CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcC
Q 001059 1016 YLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEEN 1092 (1170)
Q Consensus 1016 ~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~---~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~G 1092 (1170)
+|++.||. ++.++||||||+|+|||+.+|++. ..+.....+++|+|++.+ +....+|+++++.||+.|
T Consensus 323 ~L~~~~~~--------~g~~~pavGfaigieRl~~~l~~~~~~~~~~~~~~~~~v~v~~~~-~~~~~~a~~l~~~Lr~~G 393 (464)
T 4g84_A 323 GLVGMFDP--------KGRKVPCVGLSIGVERIFSIVEQRLEALEEKIRTTETQVLVASAQ-KKLLEERLKLVSELWDAG 393 (464)
T ss_dssp STGGGTST--------TCCCCCEEEEEECHHHHHHHHHHHHHTTTCCCCSCCCCEEEECSS-SSCHHHHHHHHHHHHHTT
T ss_pred HHHHHhcc--------CCCCCCCccccccHHHHHHHHHHhccccCcccccccceEEEEeCC-HHHHHHHHHHHHHHHHCC
Confidence 99988842 234679999999999999988632 222234557789999986 778899999999999999
Q ss_pred CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1093 IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1093 i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
++|++++...+++++++++|++.|++|+||+|++|+++|+|+||||.+|+|.+|++++++++|++.++
T Consensus 394 i~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~~E~~~g~v~vK~l~tgeq~~v~~~elv~~lk~~l~ 461 (464)
T 4g84_A 394 IKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGEQELKDGVIKLRSVTSREEVDVRREDLVEEIKRRTG 461 (464)
T ss_dssp CCEECCSCSSCCHHHHHHHHHHHTCCEEEECCHHHHHHTEEEEEETTTCCEEEEEGGGHHHHHHHHHT
T ss_pred CcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECchhhhCCEEEEEECCCCCeEEeeHHHHHHHHHHHhc
Confidence 99998765566899999999999999999999999999999999999999999999999999999876
|
| >1wu7_A Histidyl-tRNA synthetase; ligase, structural genomics, dimer; 2.40A {Thermoplasma acidophilum} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-61 Score=577.11 Aligned_cols=409 Identities=17% Similarity=0.232 Sum_probs=347.2
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC-CCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG-DCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~-~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
+.|+|++||+|.+++.+++|++.++++|++|||++|.||+| ++.. .|....++||+|.|++|+.++||||+|+|+
T Consensus 7 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~~~em~~~~D~~g~~l~LrPd~t~~~ 86 (434)
T 1wu7_A 7 EKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEATPST 86 (434)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETHHHHTTSCTTGGGGSCEEECTTSCEEEECSCSHHHH
T ss_pred CCCCCCCcCCHHHHHHHHHHHHHHHHHHHHcCCEEeeccccccHHHhhhccCCccccceEEEECCCCCEEEeCCCChHHH
Confidence 57899999999999999999999999999999999999999 3334 366778999999999999999999999999
Q ss_pred HHHHHhCCC--CceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcc-eEEEeCcH
Q 001059 788 IRWAISNQK--SSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAES-CDIHLNHG 863 (1170)
Q Consensus 788 aR~~~~~~~--~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~-~~i~lg~~ 863 (1170)
||++++++. .|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+++|++ + +.|+|||+
T Consensus 87 aR~~~~~~~~~lP~rl~~~g~vfR~erp~~gR~REF~Q~d~ei~g~~~~~ad~E~i~~~~~~l~~lgl~-~~~~i~l~~~ 165 (434)
T 1wu7_A 87 VRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEADAEVIALASSILDRLGLQ-DIYEIRINSR 165 (434)
T ss_dssp HHHHTTCTTCCSSEEEEECCEEECCCCSCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTTT-TSEEEEEEEH
T ss_pred HHHHHhcCCCCCCeEEEEEcCeecCCCCCCCCccceEEeeEEEEcCCChHhhHHHHHHHHHHHHHcCCC-CceEEEECCh
Confidence 999998743 699999999999999888655 569999999999999999999999999999999995 6 99999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 001059 864 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 943 (1170)
Q Consensus 864 ~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 943 (1170)
+++.++++.+| +++++ .++.+++++++ ..+++++..+ ...++....++.+.+++ ...++..+ ++.+
T Consensus 166 g~~~~~~~~~g-~~~~~-~l~~~l~~~~~---------~~~~~~~~~l-~~~~l~~~~~~~~~~~~-~~~~~~~~-l~~~ 231 (434)
T 1wu7_A 166 KIMEEIIGGMT-SSDPF-SVFSIIDRYHK---------ISREEFVDQL-RSAGIGEDGVSMIADLC-SGTRGIDE-MARI 231 (434)
T ss_dssp HHHHHHHHTTC-SSCHH-HHHHHHHTTTT---------SCHHHHHHHH-HHTTCCHHHHHHHHHHH-HSCBCHHH-HHHH
T ss_pred hhHHHHHHHhC-cHhHH-HHHHHHHHHhc---------cchHHHHHHH-HhCCCCHHHHHHHHHHH-HhCCCHHH-HHHH
Confidence 99999998676 77777 88888888773 3455554444 55788888888888887 34455444 6655
Q ss_pred hccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhc
Q 001059 944 RGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRM 1021 (1170)
Q Consensus 944 ~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~f 1021 (1170)
+ .......+.++++ ++..+|+. +|.||++++||++||||+||+++... +.+.+||+|||||+|++.|
T Consensus 232 ~---~~~~~~~~~l~~~~~~l~~~g~~-~i~~D~~l~rgldYYtg~vFe~~~~~-------g~~~~v~~GGRYD~li~~f 300 (434)
T 1wu7_A 232 T---GKSSEEIARMAAVEDLLASYGVK-NVRYDFSIVRGLSYYTGIVFEAYDRS-------GQFRAILGGGRYDNLASLM 300 (434)
T ss_dssp T---TCCCHHHHHHHHHHHHHHHTTCC-CCEECTTCCTTTTTCSSEEEEEEETT-------SSCSCSSEEEECTTHHHHH
T ss_pred H---hhHHHHHHHHHHHHHHHHHcCCC-EEEECCCcccCccccCCeEEEEEECC-------CCcCeeeecccHHHHHHHh
Confidence 5 1222344555555 77888986 79999999999999999999998742 1235799999999999999
Q ss_pred ccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCC
Q 001059 1022 WDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVP 1101 (1170)
Q Consensus 1022 g~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~ 1101 (1170)
|++ +.||+|||||+|||+.+|.+..... +.++.+|+|++.+ ++...+|.+++++||+.|++|++++.
T Consensus 301 gg~----------~~pa~Gf~igveRl~~~l~e~~~~~-p~~p~~v~v~~~~-~~~~~~a~~l~~~Lr~~Gi~v~~d~~- 367 (434)
T 1wu7_A 301 SGE----------SVPAVGFGMGDAVISLLLKRENVQI-PREKKSVYICRVG-KINSSIMNEYSRKLRERGMNVTVEIM- 367 (434)
T ss_dssp HSC----------CCCEEEEEEEHHHHHHHHHHTTCCC-CCSSCEEEEEEES-SCCHHHHHHHHHHHHTTTCEEEECCS-
T ss_pred CCC----------CCCeEEEEEcHHHHHHHHHhcCCcc-CCCCCcEEEEEcC-hHHHHHHHHHHHHHHHCCCeEEEecC-
Confidence 753 4699999999999999886432220 2256899999986 66789999999999999999998876
Q ss_pred CCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1102 DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1102 ~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
++++++++++|++.|+|++|++|++|+++|+|+||++.++++..|+++++++++++.|+
T Consensus 368 ~~~~~~~~~~a~~~g~~~~iiiG~~e~~~g~v~vk~~~~~~~~~v~~~el~~~l~~~~~ 426 (434)
T 1wu7_A 368 ERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNMYTGSQENVGLDSVVEHLISQAT 426 (434)
T ss_dssp CCCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCCEEEEEGGGHHHHHHHCCC
T ss_pred CCCHHHHHHHHHHCCCCEEEEECchhhhcCeEEEEECCCCCeEEEcHHHHHHHHHHHhh
Confidence 67999999999999999999999999999999999999999999999999999987653
|
| >3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-60 Score=559.21 Aligned_cols=373 Identities=16% Similarity=0.190 Sum_probs=312.2
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCcccccccee----ccCCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMY----LLGDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~----~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
-+.|+|++||+|.++.++++|++.++++|++|||++|.||+|. +...++...++||+|.|++|+.++||||+|+|+
T Consensus 10 ~~~p~G~~d~lP~~~~~~~~i~~~l~~~~~~~Gy~eI~tP~lE~~el~~~~g~~~~~~my~f~D~~g~~l~LRpd~T~~~ 89 (400)
T 3od1_A 10 FEKPFGMRDTLPEWYKTKKNICDQMTEEINLWGYDMIETPTLEYYETVGVVSAILDQQLFKLLDQQGNTLVLRPDMTAPI 89 (400)
T ss_dssp TCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETTTHHHHSSSCGGGSCEEECTTSCEEEECSCSHHHH
T ss_pred ccCCCcchhcCHHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccceEEEECCCCCEEEECCCCHHHH
Confidence 4678999999999999999999999999999999999999993 222366778999999999999999999999999
Q ss_pred HHHHHhC---CCCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcH
Q 001059 788 IRWAISN---QKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 863 (1170)
Q Consensus 788 aR~~~~~---~~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~ 863 (1170)
||+++++ ...|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ ++|+|||+
T Consensus 90 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~~~gR~Ref~Q~g~ei~G~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~l~~~ 168 (400)
T 3od1_A 90 ARLVASSLKDRAYPLRLAYQSNVYRAQQNEGGKPAEFEQLGVELIGDGTASADGEVIALMIAALKRAGLSE-FKVAIGHV 168 (400)
T ss_dssp HHHHHHHCSSSCSCEEEEEEEEEECCCC---CCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTCCS-EEEEEEEH
T ss_pred HHHHHhhcccCCCCeEEEEEcCEEeCCCCCCCCCCccEEeEEEEECCCChHhHHHHHHHHHHHHHHCCCCc-eEEEecCH
Confidence 9999885 35699999999999999988554 5699999999999999999999999999999999985 99999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 001059 864 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 943 (1170)
Q Consensus 864 ~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 943 (1170)
++++++++.+|++++.++.++++++++|+ .+ + ++++++.+++++.++.+..++ .+.|+. ++++.+
T Consensus 169 ~i~~~ll~~~~~~~~~~~~l~~~l~~~~~---------~~---~-~~~l~~~~l~~~~~~~l~~l~-~~~g~~-~~l~~~ 233 (400)
T 3od1_A 169 GYVNALLMDVVGNEQRADRLRRFLYEKNY---------VG---Y-REHVKSLNLSTIDKSRLMNLL-SLRGGR-AAIEEA 233 (400)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHTTCH---------HH---H-HHHHHHSSSCHHHHHHHHHGG-GCEESH-HHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHhcCh---------hH---H-HHHHHhcCCCHHHHHHHHHHH-hccCCH-HHHHHH
Confidence 99999999999999999999999998873 22 2 445666789999999999998 466664 588888
Q ss_pred hccCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhh
Q 001059 944 RGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLL 1018 (1170)
Q Consensus 944 ~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~ 1018 (1170)
..+. .++...+++++| +|+.+|+.+++.||++++||++||||+|||+|..+.+. +||+|||||+|+
T Consensus 234 ~~l~-~~~~~~~~l~~l~~l~~~L~~~gi~~~~~~D~~lvRgldYYTG~vFe~~~~~~g~--------~i~~GGRYD~L~ 304 (400)
T 3od1_A 234 RGLI-QTEKGKTALAEMTKLYEVLESYGASEYVKFDLTLVLHMSYYTGVVFEGYGNRLGV--------PLCSGGRYDELL 304 (400)
T ss_dssp HTTC-CSHHHHHHHHHHHHHHHHHHHTTCGGGEEEETTCCSCSSSCCSEEEEEEETTCSS--------EEEEEEECTTHH
T ss_pred Hhhh-cChhhHHHHHHHHHHHHHHHHcCCCceEEEeCCccCCCcccCCeEEEEEECCCCC--------eeecccccchhh
Confidence 8754 456666666666 78899998889999999999999999999999876543 799999999999
Q ss_pred hhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEe
Q 001059 1019 HRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFV 1098 (1170)
Q Consensus 1019 ~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~ 1098 (1170)
+.||++ +||||||+|+|||+.+|....... ...+++|+. + ++...+|+++|++||+.|++|++.
T Consensus 305 ~~fG~~-----------~pavGfaiglerL~~~l~~~~~~~---~~~~v~v~~-~-~~~~~~a~~~a~~LR~~G~~v~~~ 368 (400)
T 3od1_A 305 SKFHRP-----------AQATGFGVRIDLLVEALNGEIISN---GHEQTCILF-S-NERRFEAIELARKKRANGEAVVLQ 368 (400)
T ss_dssp HHTTCC-----------CCEEEEEEEHHHHHHHHCC---------CCCEEEEE-C-GGGHHHHHHHHHHHHTTTCCEEEE
T ss_pred hccCCC-----------CCEEEEEeeHHHHHHHHHhcCCCC---CCCeEEEEE-C-cHHHHHHHHHHHHHHHCCCEEEEE
Confidence 998652 699999999999999887432211 112366654 3 566889999999999999999988
Q ss_pred eCCCCCHHHHHHHHHhCCCcEEEEEcCCccc
Q 001059 1099 PVPDPSLTEQYEYASEHDIKCLVILTDTGAQ 1129 (1170)
Q Consensus 1099 ~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~ 1129 (1170)
..... ... ||..+|+..++++.+.+-.
T Consensus 369 ~~~~~--~~~--~~~~~~~~~~~~~~~~~~~ 395 (400)
T 3od1_A 369 DLAGV--TDV--DAMSSNYQDVIYCIGTAGR 395 (400)
T ss_dssp EGGGC--SCH--HHHHTTSSEEEEECSCC--
T ss_pred ecCCh--hHH--HHHHcCCCEEEEEecCCCC
Confidence 76432 222 9999999999999887543
|
| >4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-59 Score=561.64 Aligned_cols=397 Identities=17% Similarity=0.213 Sum_probs=305.9
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Cc---ccccceEEEeccC-CceeeecCC
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHG-GDLLELSHE 782 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~-G~~laLRPD 782 (1170)
-+.|+|++||+|.++.++++|++.++++|++|||++|.||+| ++... |+ ...++||+|.|++ |+.++||||
T Consensus 32 ~~~~~G~~d~lP~~~~~~~~l~~~i~~~~~~~Gy~eI~tP~le~~el~~~~~G~~~d~~~~~my~~~D~~~g~~l~LRPd 111 (467)
T 4e51_A 32 LTGVKGMNDILPQDAGLWEFFEATVKSLLRAYGYQNIRTPIVEHTPLFTRGIGEVTDIVEKEMYSFVDALNGENLTLRPE 111 (467)
T ss_dssp CCCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTCTTSHHHHHTCCEEECTTTCCEEEECSC
T ss_pred CCCCCCceeeCHHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHhhhccCCcccccccceEEEecCCCCCEEEeCcc
Confidence 367899999999999999999999999999999999999999 33222 33 3678999999999 999999999
Q ss_pred CCHHHHHHHHhCC---CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 783 LRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 783 ~T~~iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
+|+|+||+++++. ..|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+.||+.+ ++|
T Consensus 112 ~t~~~ar~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~ReF~Q~d~ei~g~~~~~adaEvi~l~~~~l~~lGl~~-~~i 190 (467)
T 4e51_A 112 NTAAVVRAAIEHNMLYDGPKRLWYIGPMFRHERPQRGRYRQFHQVGVEALGFAGPDADAEIVMMCQRLWEDLGLTG-IKL 190 (467)
T ss_dssp SHHHHHHHHHHTTTTTTSCEEEEEEEEEECCCCC---CCSEEEEEEEEEETCCCSHHHHHHHHHHHHHHHHHTCCC-EEE
T ss_pred cHHHHHHHHHHcccccCCCEEEEEEccEEccCCCCCCCcCceEEEEEEEEeCCChHHHHHHHHHHHHHHHHcCCCc-eEE
Confidence 9999999998754 3599999999999999988554 5699999999999999999999999999999999986 999
Q ss_pred EeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHH----HHHHHhcC
Q 001059 859 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQ----TVGLRFCG 934 (1170)
Q Consensus 859 ~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~----~l~~~~~g 934 (1170)
+|||++..+.. ...++.+..++.... ..++++..+.+. .++.....
T Consensus 191 ~in~~g~~~~~-------~~~~~~l~~~l~~~~-----------------------~~l~~~~~~~l~~~~l~~ld~k~~ 240 (467)
T 4e51_A 191 EINSLGLAEER-------AAHRVELIKYLEQHA-----------------------DKLDDDAQRRLYTNPLRVLDTKNP 240 (467)
T ss_dssp EEEECCCHHHH-------HHHHHHHHHHHHTTG-----------------------GGCCHHHHHHHTTCTHHHHTCCCG
T ss_pred EEeCCCchhhh-------HHHHHHHHHHHHHHH-----------------------hccCHHHHHHHHhchHHHhhccch
Confidence 99997643211 112233333333210 112222222211 11100000
Q ss_pred ChhhHHHHHhccCC-CChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccc
Q 001059 935 AADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1011 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~G 1011 (1170)
...++++.+..++. .+....+.++.| +|+.+|+. +.||++++||++||||+|||+|..+.+ .+++||+|
T Consensus 241 ~~~~~l~~a~~l~~~l~~~~~~~l~~l~~~L~~~gi~--~~~d~~lvRgl~YYtg~vFe~~~~~~g------~~~tI~~G 312 (467)
T 4e51_A 241 ALQEIVRNAPKLIDFLGDVSRAHFEGLQRLLKANNVP--FTINPRLVRGLDYYNLTVFEWVTDKLG------AQGTVAAG 312 (467)
T ss_dssp GGHHHHHTSCCGGGGCCHHHHHHHHHHHHHHHHTTCC--EEECTTCCCSCTTCCSEEEEEEECC----------CEEEEE
T ss_pred hHHHHHhhhHHHHHhhhHHHHHHHHHHHHHHHHcCCe--EEEcCccccCccccCCeEEEEEECCCC------CcceecCC
Confidence 00112222111111 134455667777 78889984 999999999999999999999987644 23589999
Q ss_pred cccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCCCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHc
Q 001059 1012 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVDFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE 1091 (1170)
Q Consensus 1012 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~ 1091 (1170)
||||+|++.||++ +.||||||+|+|||+.+|.+....+ ...+.+|+|++.+ ++...+|+++++.||+.
T Consensus 313 GRYD~Lv~~~g~~----------~~PavGfa~gleRl~~~l~~~~~~~-~~~p~~V~Vip~~-~~~~~~A~~ia~~LR~~ 380 (467)
T 4e51_A 313 GRYDPLIEQLGGK----------PTAACGWAMGIERILELLKEEHLVP-EQEGVDVYVVHQG-DAAREQAFIVAERLRDT 380 (467)
T ss_dssp EECTHHHHHTTSS----------CCCEEEEEEEHHHHHHHHHHTTCCC-CCCCCSEEEEECS-HHHHHHHHHHHHHHHHT
T ss_pred CcHHHHHHHhCCC----------CCCceeehHHHHHHHHHHHhcCCcc-cCCCCeEEEEEcC-hHHHHHHHHHHHHHHHc
Confidence 9999999999764 3699999999999999887432221 2466789999986 66788999999999999
Q ss_pred CCeEEEeeCC---CCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCC-C------cccccchHHHHHHHHHHH
Q 001059 1092 NIKAQFVPVP---DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDV-K------KEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1092 Gi~v~~~~~~---~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~-~------eq~~v~~~~l~~~l~~~l 1159 (1170)
|++|++++.. ++++++++++|++.|++|+|+||++|+++|+|+||||.+ + +|..|++++++++|++.+
T Consensus 381 Gi~ve~d~~~~~~~~sl~kq~~~A~~~g~~~~iiiG~~E~~~g~V~vk~~~~~~~~~~~~~q~~v~~~elv~~l~~~~ 458 (467)
T 4e51_A 381 GLDVILHCSADGAGASFKSQMKRADASGAAFAVIFGEDEVTNGTASVKPLRGTGDDGEKSVQQSVPVESLTEFLINAM 458 (467)
T ss_dssp TCCEEECCCTTSSCCCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEEC---------CCCEEEEGGGHHHHHHHHH
T ss_pred CCeEEEEcccccccCCHHHHHHHHHHcCCCEEEEECcchhhCCeEEEEECCCCCCCCCcccceEEcHHHHHHHHHHHh
Confidence 9999987753 579999999999999999999999999999999999999 8 999999999999999887
|
| >1h4v_B Histidyl-tRNA synthetase; class IIA aminoacyl-tRNA synthetase, ATP + L-histidine tRNA(His)-> AMP + PPI + L-histidyl-tRNA(His); 2.4A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1ady_A* 1adj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-56 Score=529.83 Aligned_cols=398 Identities=16% Similarity=0.203 Sum_probs=302.3
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Cc---ccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.|+|++||+|.++..+++|++.++++|++|||++|.||+| ++... |+ ...++||+|.|++|+.++||||+|
T Consensus 4 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l~Lrpd~t 83 (421)
T 1h4v_B 4 RAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGT 83 (421)
T ss_pred CCCCCCCCcCHHHHHHHHHHHHHHHHHHHHcCCEEecccccccHHHhhhccCCcccccccceEEEECCCCCEEeeCCcch
Confidence 57899999999999999999999999999999999999999 33333 33 467899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 785 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 785 ~~iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
+|+||+++++. ..|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+++|+++ ++|+
T Consensus 84 ~~~ar~~~~~~~~~~~lP~rl~~~g~vfR~e~p~~gR~REf~Q~g~e~~g~~~~~ad~e~i~~~~~~l~~lgl~~-~~i~ 162 (421)
T 1h4v_B 84 AAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRR-LKVK 162 (421)
T ss_pred HHHHHHHHhccccccCCCeEEEEecCeecCCCCCCCCcccEEEccEEEECCCChhhhHHHHHHHHHHHHHcCCCc-eEEE
Confidence 99999998652 4699999999999999988655 5699999999999999999999999999999999985 9999
Q ss_pred eCcHHHHHHHHHHhCCCHHHHHHHHHHHHHh-cCCCCCcccccchHHHHHHHHHHHcCCc--HHHHHHHHHHHHHhcCCh
Q 001059 860 LNHGDLLEAIWSWAGIKAEHREKVAELLAMM-GSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAA 936 (1170)
Q Consensus 860 lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~-d~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~ 936 (1170)
|||++..... +..++.+..++... +.+. . +....+ ...++. ....+.+.+++..+.+
T Consensus 163 i~~~g~~~~~-------~~~~~~l~~~l~~~~~~l~------~----~~~~~l-~~~~~~~l~~~~~~~~~~~~~~~~-- 222 (421)
T 1h4v_B 163 LSSVGDPEDR-------ARYNAYLREVLSPHREALS------E----DSKERL-EENPMRILDSKSERDQALLKELGV-- 222 (421)
T ss_pred EcCCCchhhH-------HHHHHHHHHHHHHHHhhcC------H----HHHHHH-HhcchHhhhcccHHHHHHHHhcCh--
Confidence 9996532210 01111121222111 0000 0 000111 000000 0000011111100000
Q ss_pred hhHHHHHhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 937 DQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 937 ~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
. ++...+ .....+.++++ ++..+|+ .+.+|++++||++||||++|+++..+.+ ...+||+||||
T Consensus 223 ~----~l~~~l--~~~~~~~l~~~~~~l~~~g~--~i~~D~~l~rg~~YYtg~vFe~~~~~~g------~~~~v~~GGRY 288 (421)
T 1h4v_B 223 R----PMLDFL--GEEARAHLKEVERHLERLSV--PYELEPALVRGLDYYVRTAFEVHHEEIG------AQSALGGGGRY 288 (421)
T ss_pred H----HHHHHh--hHHHHHHHHHHHHHHHHcCC--eEEEecccccchhhhcCeEEEEEecCCC------CcCccccCCcH
Confidence 0 111101 12334455555 6677776 6999999999999999999999976433 23579999999
Q ss_pred chhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCC-CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCC
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD-FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEENI 1093 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~-~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi 1093 (1170)
|+|++.||++ ..||+|||||+|||+.+|.+. ..++. .++.+|+|++.+ ++....|.+++++||+. +
T Consensus 289 d~l~~~fgg~----------~~pa~Gf~igieRl~~~l~e~~~~~~~-~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~~-i 355 (421)
T 1h4v_B 289 DGLSELLGGP----------RVPGVGFAFGVERVALALEAEGFGLPE-EKGPDLYLIPLT-EEAVAEAFYLAEALRPR-L 355 (421)
T ss_pred HHHHHHhCCC----------CCCeEEEeecHHHHHHHHHhcCcCCCC-CCCCeEEEEECC-hHHHHHHHHHHHHHHhc-C
Confidence 9999988654 359999999999999988643 22222 467889999985 56788999999999999 9
Q ss_pred eEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 001059 1094 KAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1094 ~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l 1159 (1170)
+|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++++++.|
T Consensus 356 ~v~~d~~-~~~~~~~~~~a~~~g~p~~iivG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~l 420 (421)
T 1h4v_B 356 RAEYALA-PRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQVRLSREEVPGYLLQAL 420 (421)
T ss_pred EEEEecC-CCCHHHHHHHHHhCCCCEEEEECchHhhcCcEEEEECCCCCceEECHHHHHHHHHHhh
Confidence 9998876 6799999999999999999999999999999999999999999999999999987764
|
| >1htt_A Histidyl-tRNA synthetase; complex (tRNA synthetase/His-adenylate), aminoacyl-tRNA synthase, ligase; HET: HIS AMP; 2.60A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1kmm_A* 1kmn_A* 2el9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-57 Score=535.76 Aligned_cols=397 Identities=16% Similarity=0.197 Sum_probs=296.1
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-C---cccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-C---PQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~---~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.|+|++||+|.+++.+++|++.++++|++|||++|.||+| .+... | +...++||+|.|++|+.++||||+|
T Consensus 5 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~G~~ei~tP~le~~el~~~~~G~~~d~~~~em~~~~D~~g~~l~Lrpd~t 84 (423)
T 1htt_A 5 QAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGT 84 (423)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEEHHHHHHHHCSSSHHHHHTCEEEECTTSCEEEECSCSH
T ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCEEecccccCHHHHHhhccCCchhhhhhheEEEEcCCCCEEEeCCCch
Confidence 57899999999999999999999999999999999999999 23222 3 3467899999999999999999999
Q ss_pred HHHHHHHHhC---CCCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCC-CcceEEE
Q 001059 785 LPFIRWAISN---QKSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFH-AESCDIH 859 (1170)
Q Consensus 785 ~~iaR~~~~~---~~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi-~~~~~i~ 859 (1170)
+|+||+++++ +..|+|+||+|+|||+|+|+.+| |||+|+|+|+||.+++.+|+|+|.++.++|+++|+ .+ +.|+
T Consensus 85 ~~~aR~~~~~~~~~~~P~rl~~~g~vfR~e~p~~gR~Ref~Q~d~e~~g~~~~~ad~e~i~~~~~~l~~lgl~~~-~~i~ 163 (423)
T 1htt_A 85 AGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEH-VTLE 163 (423)
T ss_dssp HHHHHHHHHHTCSTTCCEEEEEEEEEECCCCCCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHTCGGG-CEEE
T ss_pred HHHHHHHHhcccccCCCeEEEEEcCEecCCCCCCCccceeEEeeEEEECCCCchhhHHHHHHHHHHHHHCCCCCC-cEEE
Confidence 9999999864 35699999999999999988655 56999999999999999999999999999999999 65 9999
Q ss_pred eCcHHHHHHHHHHhCCCHHHHHHHHHHHHH-hcCCCCCcccccchHHHHHHHHHHHcCCc--HHHHHHHHHHHHHhcCCh
Q 001059 860 LNHGDLLEAIWSWAGIKAEHREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAA 936 (1170)
Q Consensus 860 lg~~~il~~~l~~lgl~~~~~~~l~~~l~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~ 936 (1170)
|||++....... .+..+..++.. .+.+. ......+ ...++. ......+.+++. +
T Consensus 164 i~~~g~~~~~~~-------~~~~l~~~l~~~~~~~~----------~~~~~~l-~~~~l~~l~~~~~~~~~~l~---~-- 220 (423)
T 1htt_A 164 LNSIGSLEARAN-------YRDALVAFLEQHKEKLD----------EDCKRRM-YTNPLRVLDSKNPEVQALLN---D-- 220 (423)
T ss_dssp EEECCCHHHHHH-------C------------------------------------------------------------
T ss_pred EcCCCChhhHHH-------HHHHHHHHHHHHHhccC----------HHHHHHH-HhchhHhhhcccHHHHHHHh---c--
Confidence 999653221100 01111111111 00000 0000000 000000 000000111110 0
Q ss_pred hhHHHHHhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 937 DQALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 937 ~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
..++...+ .....+.++++ ++..+|+ .+.+|++++||++||||+||+++..+.+ ...+||+||||
T Consensus 221 ---~~~l~~~l--~~~~~~~l~~~~~~l~~~g~--~i~~D~~l~rg~~YYtg~vFe~~~~~~g------~~~~v~~GGRY 287 (423)
T 1htt_A 221 ---APALGDYL--DEESREHFAGLCKLLESAGI--AYTVNQRLVRGLDYYNRTVFEWVTNSLG------SQGTVCAGGRY 287 (423)
T ss_dssp ----------C--CHHHHHHHHHHHHHHHTTTC--CCEECTTCCCSSTTCCSEEEEEECC----------CCEEEEEEEC
T ss_pred ---chHHHhhh--hHHHHHHHHHHHHHHHHcCC--eEEEccccccchHHHcCceEEEEeCCCC------CcCCcCCCccH
Confidence 01111111 23344555555 6677776 6999999999999999999999865422 34589999999
Q ss_pred chhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC-CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHHc--
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWEE-- 1091 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~-- 1091 (1170)
|+|++.||++ +.||||||||+|||+.+|.+ +..++ ..++.+|+|++.+ ++...+|.+++++||+.
T Consensus 288 D~l~~~fgg~----------~~pavGf~igveRl~~~l~e~~~~~~-~~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~~~~ 355 (423)
T 1htt_A 288 DGLVEQLGGR----------ATPAVGFAMGLERLVLLVQAVNPEFK-ADPVVDIYLVASG-ADTQSAAMALAERLRDELP 355 (423)
T ss_dssp TTHHHHTTSC----------CCCEEEEEEEHHHHHHHHHHHSTTCC-CCCSCSEEEEECS-TTHHHHHHHHHHHHHHHST
T ss_pred HHHHHHhCCC----------CCCeEEEEecHHHHHHHHHhcCcCCC-CCCCCcEEEEEcC-HHHHHHHHHHHHHHHcCCC
Confidence 9999998643 46999999999999988863 33322 2367799999986 56789999999999999
Q ss_pred CCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHH
Q 001059 1092 NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1092 Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l 1159 (1170)
|++|++++. ++++++++++|++.|+|++|++|++|+++|+|+||++.+++|..++++++++++++.+
T Consensus 356 Gi~v~~d~~-~~~~~~~~~~a~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~~~~v~~~el~~~l~~~~ 422 (423)
T 1htt_A 356 GVKLMTNHG-GGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSGEQTAVAQDSVAAHLRTLL 422 (423)
T ss_dssp TCCEEECCS-CCCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEHHHHHHHHHHHH
T ss_pred CcEEEEeCC-CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCCceEEcHHHHHHHHHHhh
Confidence 999998876 5799999999999999999999999999999999999999999999999999998764
|
| >3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-54 Score=500.25 Aligned_cols=304 Identities=19% Similarity=0.185 Sum_probs=257.3
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccc-cceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFK-RNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~-~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
+.|+|++||+|.++..+++|++.++++|++|||++|.||+| .+...++... ++||+|.|++|+.++||||+|+|+
T Consensus 24 ~~p~G~~d~lP~~~~~~~~i~~~i~~~f~~~Gy~eI~tP~le~~el~~~~g~~~~~~~my~~~D~~g~~l~LRpd~T~~~ 103 (373)
T 3rac_A 24 DRPPGMQDGYPDFAKRRRAVETRLLSFVEDAGYEPVTSGLFEYVDTLLRARSPESSRDWIRLFDGGGDAVALRPEMTPSI 103 (373)
T ss_dssp CCCTTCCCCCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHTTSCTTSCCCCCBCCCCSSSCEEECSSSHHHH
T ss_pred CCCCCccccCHHHHHHHHHHHHHHHHHHHHcCCeEEECCceeeHHHHhhcCCccchhceEEEECCCCCEEEECCcCHHHH
Confidence 67899999999999999999999999999999999999999 3333466677 899999999999999999999999
Q ss_pred HHHHHhC---CCCceeEEEecCeEEcCCC------CC-CCCceeEeEEEEeCCC-CcccHHHHHHHHHHHHHHcCCCcce
Q 001059 788 IRWAISN---QKSSFKRYEISSVYRRAIG------HS-PPNRYLQGDFDIIGGA-SALTEAEVLKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~---~~~P~r~~Y~g~VfR~e~~------~~-~~~ef~Q~GvEiiG~~-~~~aDaEvi~la~~~l~~lgi~~~~ 856 (1170)
||+++++ ...|+|+||+|+|||+|++ +. +.|||+|+|+|+||.+ ++.+|+|+|.++.++|+.+|+.+ +
T Consensus 104 aR~~~~~~~~~~~P~r~~y~g~vfR~e~~g~~~~~~~gR~ReF~Q~g~ei~g~~d~~~aDaEvi~l~~~~l~~lgl~~-~ 182 (373)
T 3rac_A 104 ARMAAPRVAAGRTPIRWCYCERVYRRTDDPASLSWASGKAAESTQVGIERIGEEASVDVDMDVLRLLHEASAAAGVRH-H 182 (373)
T ss_dssp HHHHHHHHHTTCCCCEEEEEEEEEECC------------CEEEEEEEEEECSSCCCHHHHHHHHHHHHHHHHHHTCCS-C
T ss_pred HHHHHhccccCCCCeEEEEEcceEccCCCcccccccCCccceeEEeeeEEECCCCCHHHHHHHHHHHHHHHHHcCCCc-e
Confidence 9999874 4579999999999999988 64 4456999999999999 88999999999999999999975 9
Q ss_pred EEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC--
Q 001059 857 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG-- 934 (1170)
Q Consensus 857 ~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g-- 934 (1170)
+|+|||+++++++++.+|+++++++.++++++++| +.++.++..++ +++.++.+..++ .+.|
T Consensus 183 ~i~l~~~~i~~~ll~~~g~~~~~~~~l~~~l~k~~---------~~~~~~~~~~l------~~~~~~~l~~l~-~l~g~~ 246 (373)
T 3rac_A 183 RIVVSHARLVPRLLDALGISASLSRAFLACLTSGN---------YVQFRELWQLH------AAKDVDLLANLL-TWSPAE 246 (373)
T ss_dssp EEEEEETTHHHHHHHHTTCCHHHHHHHHHHHHHTC---------HHHHHHHHHHH------CSCCSCHHHHHH-HBCCCS
T ss_pred EEEecCHHHHHHHHHHcCCCHHHHHHHHHHHHhcC---------hhhHHHHHHhc------CHHHHHHHHHHH-HHhCCc
Confidence 99999999999999999999999999999999988 34444443333 334456666776 4666
Q ss_pred ---------ChhhHHHHHhccCCCChhH----HHHHHHH-----HHHHccC-cceEEEccCCCCCCCcccceEEEEEecc
Q 001059 935 ---------AADQALPRLRGALPADKPT----RKALDEL-----YLRIWRI-EKNIYIDALMPPIESYHRNLFFQVFSVK 995 (1170)
Q Consensus 935 ---------~~~~~l~~l~~~~~~~~~~----~~~l~~L-----~l~~~g~-~~~i~~Dl~lvrgldYYtG~VFe~~~~~ 995 (1170)
+..++++++..+.. ++.. .+++++| +|+.+|+ .+++.||++++||++||||+|||+|..+
T Consensus 247 ~~~~~~~~~~~~~~l~~~~~l~~-~~~~~~~~~~al~~l~~l~~~L~~~gi~~~~i~~D~~lvRgldYYTG~vFe~~~~~ 325 (373)
T 3rac_A 247 RDAAKRSREASDRELEALLRDAV-DPRAAADVRDAWRYLCRLAEALHDSGLASDVVTFDLALHRELDYYTGLVFEMFAPG 325 (373)
T ss_dssp SCTTSBCHHHHHHHHHHHHTTCS-CHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTEEECTTCCCSCTTCCSEEEEEECTT
T ss_pred cccccccccccHHHHHHHHhhhc-CcccchhHHHHHHHHHHHHHHHHHcCCCCceEEEeCCccCCCCccCCeEEEEEECC
Confidence 14678888888544 4444 6666666 7888899 7889999999999999999999999876
Q ss_pred CCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhcc
Q 001059 996 EKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 996 ~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~ 1053 (1170)
.+. +||+|||||+|++.||+ ++||||||+|+|||+.+|+
T Consensus 326 ~g~--------~i~~GGRYD~L~~~fG~-----------~~pAvGFaiglerL~~~l~ 364 (373)
T 3rac_A 326 VGA--------PIAQGGRYDELLAQFGA-----------GAPAVGFAFEVERVMAVLE 364 (373)
T ss_dssp CSS--------CSEEEEECTTTTGGGTC-----------CCCCEEEEEEHHHHHHHHH
T ss_pred CCC--------eEeecccccHHHHhhCC-----------CCCeEEEEEEHHHHHHHHH
Confidence 543 79999999999998865 2699999999999998886
|
| >3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-53 Score=476.63 Aligned_cols=260 Identities=26% Similarity=0.422 Sum_probs=205.7
Q ss_pred CCCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 347 SLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 347 ~~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
.++.+..+++|++++.||+|+||+||+|+++.+|+.||||+++..... ......+.+|+.+|+.++|||||+++++|.+
T Consensus 5 ~l~~G~~ig~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~ 84 (275)
T 3hyh_A 5 SLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKS 84 (275)
T ss_dssp ---------CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred CCCCCCEeeCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE
Confidence 344455678999999999999999999999999999999999765432 2345679999999999999999999998832
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|||||||+|+|.+.+.+.+.+++.+++.++.||+.|
T Consensus 85 ----------------------------------------~~~~~ivmEy~~g~L~~~l~~~~~l~e~~~~~~~~qi~~a 124 (275)
T 3hyh_A 85 ----------------------------------------KDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISA 124 (275)
T ss_dssp ----------------------------------------SSEEEEEEECCCEEHHHHHHHSCSCCHHHHHHHHHHHHHH
T ss_pred ----------------------------------------CCEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 4678999999999999999999999999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+|||++||+||||||+|||++.++++||+|||+|+...... ..++.+||+.|||||++.+...
T Consensus 125 l~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~----------------~~~~~~GT~~Y~APE~~~~~~y 188 (275)
T 3hyh_A 125 VEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVISGKLY 188 (275)
T ss_dssp HHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC-------------------------------CTTSCHHHHSSSSC
T ss_pred HHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC----------------ccCCeeECcccCChhhhcCCCC
Confidence 999999999999999999999999999999999998653221 1245689999999999998555
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
++.++||||+||++|||++ ||......+....+......+| ...++++++||++||+.||++|||++|+++|||
T Consensus 189 ~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~R~s~~eil~hpw 265 (275)
T 3hyh_A 189 AGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP---KFLSPGAAGLIKRMLIVNPLNRISIHEIMQDDW 265 (275)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHHHCHH
T ss_pred CCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC---CCCCHHHHHHHHHHccCChhHCcCHHHHHcCcc
Confidence 6789999999999999997 8987766665555554444444 346789999999999999999999999999999
Q ss_pred CCC
Q 001059 663 PPQ 665 (1170)
Q Consensus 663 ~~~ 665 (1170)
|+.
T Consensus 266 ~k~ 268 (275)
T 3hyh_A 266 FKV 268 (275)
T ss_dssp HHT
T ss_pred ccc
Confidence 864
|
| >4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-53 Score=478.92 Aligned_cols=284 Identities=37% Similarity=0.713 Sum_probs=215.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+||+++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+.+|+.+|++++|||||+++++|.+.....
T Consensus 1 GR~l~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~-~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~ 79 (299)
T 4g31_A 1 GRYLTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTE 79 (299)
T ss_dssp CHHHHHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECS-SHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC---
T ss_pred CCcchhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccc
Confidence 478899999999999999999999999999999999998654 3344567999999999999999999999997642100
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC---CCHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qI~~gL 506 (1170)
. ........++|||||||+ |+|.+++..... .++..++.++.||+.||
T Consensus 80 ~----------------------------~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al 131 (299)
T 4g31_A 80 K----------------------------LQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAV 131 (299)
T ss_dssp -----------------------------------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHH
T ss_pred c----------------------------ccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHH
Confidence 0 000123457899999996 599999987654 45677899999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++|||||||||+|||++.++++||+|||+|+.+........... ........++.+||+.|||||++.+ ..|
T Consensus 132 ~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~~~~---~~~~~~~~~~~~GT~~YmAPE~~~~-~~y 207 (299)
T 4g31_A 132 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT---PMPAYARHTGQVGTKLYMSPEQIHG-NSY 207 (299)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-----------------------------CCCTTSCHHHHTT-CCC
T ss_pred HHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCcccccccc---ccccccccCCcccCccccCHHHHcC-CCC
Confidence 999999999999999999999999999999999998754332111100 0011123456789999999999998 579
Q ss_pred CccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 587 DEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+.++|||||||++|||++||....+.......+. ....|+.+...++.+.+||++||++||.+|||+.++|+|+||+..
T Consensus 208 ~~~~DiwSlGvilyell~Pf~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 208 SHKVDIFSLGLILFELLYPFSTQMERVRTLTDVR-NLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp CTHHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred CCHHHHHHHHHHHHHHccCCCCccHHHHHHHHHh-cCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 9999999999999999999987665444443333 556777777778889999999999999999999999999999887
Q ss_pred hH
Q 001059 667 EY 668 (1170)
Q Consensus 667 ~~ 668 (1170)
.+
T Consensus 287 ~~ 288 (299)
T 4g31_A 287 DF 288 (299)
T ss_dssp --
T ss_pred CC
Confidence 54
|
| >1qe0_A Histidyl-tRNA synthetase; class II tRNA synthetase, beta sheet, ligase; 2.70A {Staphylococcus aureus} SCOP: c.51.1.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-52 Score=497.75 Aligned_cols=395 Identities=16% Similarity=0.185 Sum_probs=291.9
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC----CcccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD----CPQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~----~~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.|+|++||+|.++.+++.|++.++++|.+|||++|.||+| .+... .+...++||+|.|++|+.++||||+|
T Consensus 3 ~~~~G~~~~~p~~~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~g~~~~~~~~~m~~~~D~~g~~~~Lrp~~t 82 (420)
T 1qe0_A 3 KIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGT 82 (420)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHHHHCCEEECSCSH
T ss_pred CCCCcccccCHHHHHHHHHHHHHHHHHHHHcCCEEccCcccchHHHhhhccCCccchhhhheEEEEcCCCCEEEeCCCCh
Confidence 56899999999999999999999999999999999999999 23222 23567899999999999999999999
Q ss_pred HHHHHHHHhC-----CCCceeEEEecCeEEcCCCCCC-CCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 785 LPFIRWAISN-----QKSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 785 ~~iaR~~~~~-----~~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
++++|+++++ ...|+|+||+|+|||+|+|+.+ .|||+|+|+|+||.+++.+|+|+|.++.++|+.||+.+ ++|
T Consensus 83 ~~~~r~~~~~~~~~~~~lP~r~~~~g~vfR~E~~~~gR~reF~q~~~e~~~~~~~~~d~e~i~~~~~~l~~lgl~~-~~i 161 (420)
T 1qe0_A 83 AAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKH-LKL 161 (420)
T ss_dssp HHHHHHHHHTTGGGCSSCSEEEEEEEEEECC-------CCEEEEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCC-EEE
T ss_pred HHHHHHHHhccccccCCCCeEEEEecCEeecCCCcCCCcccEEEeeEEEECCCCchhHHHHHHHHHHHHHHcCCCc-eEE
Confidence 9999999864 3569999999999999988754 45799999999999999999999999999999999985 999
Q ss_pred EeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHh---cC-
Q 001059 859 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF---CG- 934 (1170)
Q Consensus 859 ~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~---~g- 934 (1170)
.|||.+....- +..++.+..++.... ..+++...+.+...+..+ .+
T Consensus 162 ~l~~~g~~~~~-------~~~~~~l~~~~~~~~-----------------------~~l~~~~~~~l~~~~~~~l~~~~~ 211 (420)
T 1qe0_A 162 VINSVGDMASR-------KEYNEALVKHFEPVI-----------------------HEFCSDCQSRLHTDPMRILDCKVD 211 (420)
T ss_dssp EEEECCCHHHH-------HHHHHHHHHHHGGGG-----------------------GGSCHHHHHTTTTCGGGGC-----
T ss_pred EEcccCchhhH-------HHHHHHHHHHHHHHH-----------------------hhhCHHHHHHHHhcchhhhcccch
Confidence 99995422110 011112222222110 001111111000000000 00
Q ss_pred ChhhHHHHHhccCC-CChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccc
Q 001059 935 AADQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1011 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~G 1011 (1170)
...++++.+..+.. .+....+.++.| +++.+|+ .+.+|++++|+++||||+||+++..+.. ..+.+++|++|
T Consensus 212 ~~~~~~~~a~~l~~~l~~~~~~~l~~l~~~l~~~gi--~~~~d~~l~rg~~yYtg~vfe~~~~~~~---~~g~~~~i~~G 286 (420)
T 1qe0_A 212 RDKEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGI--PYTEDPNLVRGLDYYTHTAFELMMDNPN---YDGAITTLCGG 286 (420)
T ss_dssp -------CCCCGGGCCCTTHHHHHHHHHHHHHHHTC--CCEECTTCCCCCTTEEEEEEEEEEECTT---STTSEEEEEEE
T ss_pred hHHHHHhhchHHHHHhhHHHHHHHHHHHHHHHHcCC--eEEECcccccchhhhcCeEEEEEEcCCC---CCCCcCccccC
Confidence 00111111111000 123455666666 6777887 5899999999999999999999987540 01223589999
Q ss_pred cccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC-CCCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHHH
Q 001059 1012 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVAELWE 1090 (1170)
Q Consensus 1012 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~ 1090 (1170)
||||+|++.||++ .+|||||++|+|||+.+|++ +...+. .++.+|+|++.+ +....+|.++++.||+
T Consensus 287 gRYd~l~~~~g~~----------~~P~vg~~igveRl~~~le~~~~~~p~-~~p~~v~i~~~~-~~~~~~a~~l~~~Lr~ 354 (420)
T 1qe0_A 287 GRYNGLLELLDGP----------SETGIGFALSIERLLLALEEEGIELDI-EENLDLFIVTMG-DQADRYAVKLLNHLRH 354 (420)
T ss_dssp EEEESHHHHTTCC----------CCEEEEEEEEHHHHHHHHHHTTCCCCC-CCCCSEEEEECH-HHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHhCCC----------CCCEEEEEecHHHHHHHHHhcCCCCCC-CCCCeEEEEEeC-HHHHHHHHHHHHHHHH
Confidence 9999999988654 36999999999999998863 222222 567889999885 5677899999999999
Q ss_pred cCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHH
Q 001059 1091 ENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLL 1156 (1170)
Q Consensus 1091 ~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~ 1156 (1170)
.|++|++++. ++++++++++|++.|+|++|+||++|+++|+|+||++.+++|..|++++++++++
T Consensus 355 ~Gi~v~~d~~-~~~~~~~~~~a~~~g~p~~iiig~~e~~~~~v~vk~~~~~~~~~v~~~~l~~~l~ 419 (420)
T 1qe0_A 355 NGIKADKDYL-QRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGESETIELDALVEYFK 419 (420)
T ss_dssp TTCCEEECCS-CCCHHHHHHHHHHTTCSEEEEECHHHHHHTCEEEEETTTCCEEEECTTHHHHHHH
T ss_pred CCCEEEEecC-CCCHHHHHHHHHHcCCCEEEEECcchhhcCeEEEEECCCCCeEEEcHHHHHHHHh
Confidence 9999998875 5799999999999999999999999999999999999999999999999998874
|
| >4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-53 Score=481.14 Aligned_cols=262 Identities=28% Similarity=0.461 Sum_probs=226.1
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++++.||+|+||+||+|+++.+|+.||||+++.... .....+.+.+|+.+|+.++|||||+++++|.
T Consensus 29 ~~~~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~------ 102 (311)
T 4aw0_A 29 KRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ------ 102 (311)
T ss_dssp CCGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEE------
T ss_pred CCccccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEE------
Confidence 345789999999999999999999999999999999975421 1223567999999999999999999999883
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
+..++|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+||
T Consensus 103 ----------------------------------~~~~~yivmEy~~gG~L~~~i~~~~~l~e~~~~~~~~qi~~al~yl 148 (311)
T 4aw0_A 103 ----------------------------------DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYL 148 (311)
T ss_dssp ----------------------------------CSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 3467899999997 59999999999999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++|||||||||+|||++.++++||+|||+|+.+.... ......+.+||+.|||||++.+ ..|+.+
T Consensus 149 H~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~-------------~~~~~~~~~GTp~YmAPEvl~~-~~y~~~ 214 (311)
T 4aw0_A 149 HGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPES-------------KQARANSFVGTAQYVSPELLTE-KSACKS 214 (311)
T ss_dssp HHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTT-------------TCCCBCCCCSCGGGCCHHHHHH-SCBCHH
T ss_pred HHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCC-------------CcccccCcccCcccCCHHHHcC-CCCCcH
Confidence 99999999999999999999999999999998764221 0112356799999999999998 569999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH------HHhc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE------LLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e------iL~~ 660 (1170)
+|||||||+||||++ ||......+....+......+|. ..++++++||++||++||.+|||++| |++|
T Consensus 215 ~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~p~---~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~H 291 (311)
T 4aw0_A 215 SDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLEYDFPE---KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAH 291 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT---TCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCc---ccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCC
Confidence 999999999999997 99887777777777666555554 46789999999999999999999987 6899
Q ss_pred cCCCCchHHH
Q 001059 661 ALPPQMEYEL 670 (1170)
Q Consensus 661 ~~~~~~~~~~ 670 (1170)
|||....|+.
T Consensus 292 p~F~~idw~~ 301 (311)
T 4aw0_A 292 PFFESVTWEN 301 (311)
T ss_dssp GGGTTCCCTT
T ss_pred CCcCCCCHHH
Confidence 9999887653
|
| >3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-52 Score=468.85 Aligned_cols=254 Identities=24% Similarity=0.382 Sum_probs=215.3
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++.++||+|+||+||+|+++.+|..||||++..........+.+.+|+.+|++++|||||+++++|....
T Consensus 28 ~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~--------- 98 (290)
T 3fpq_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV--------- 98 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEE---------
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeecc---------
Confidence 46778899999999999999999999999999876666666778999999999999999999999985421
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-- 513 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g-- 513 (1170)
....++|||||||+ |+|.+++.+.+.+++..++.++.||+.||+|||++|
T Consensus 99 ---------------------------~~~~~~~lvmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~ylH~~~~~ 151 (290)
T 3fpq_A 99 ---------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP 151 (290)
T ss_dssp ---------------------------TTEEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ---------------------------CCCcEEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 12467899999997 599999999899999999999999999999999999
Q ss_pred ccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 514 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 514 IiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||||||||+||||+. ++++||+|||+|+..... ..++.+|||.|||||++.+ .|+.++||
T Consensus 152 IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~-----------------~~~~~~GTp~YmAPE~~~~--~y~~~~Di 212 (290)
T 3fpq_A 152 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESVDV 212 (290)
T ss_dssp CCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHHHH
T ss_pred EEecccChhheeEECCCCCEEEEeCcCCEeCCCC-----------------ccCCcccCccccCHHHcCC--CCCcHHHH
Confidence 999999999999985 799999999999853211 1245689999999999976 49999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
|||||+||||+| ||............+......+......++++++||.+||+.||++|||+.++|+||||++
T Consensus 213 wSlGvilyelltg~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~ 288 (290)
T 3fpq_A 213 YAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred HHHHHHHHHHHHCCCCCCCCCcHHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccC
Confidence 999999999997 8876555554444444332223344556789999999999999999999999999999975
|
| >4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-53 Score=485.15 Aligned_cols=255 Identities=31% Similarity=0.591 Sum_probs=217.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|+++++||+|+||+||+|+++.+|+.||||+++.........+.+.+|+.+|++++|||||+++++|.+
T Consensus 23 me~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~-------- 94 (350)
T 4b9d_A 23 MEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEE-------- 94 (350)
T ss_dssp CCCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred ccceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEE--------
Confidence 579999999999999999999999999999999998776666667889999999999999999999999843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|||||||+ |+|.+++... ..+++.+++.|+.||+.||+|||
T Consensus 95 --------------------------------~~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH 142 (350)
T 4b9d_A 95 --------------------------------NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVH 142 (350)
T ss_dssp --------------------------------TTEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999997 5999999754 35799999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|||||||||+||||+.++++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++
T Consensus 143 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GT~~YmAPE~l~~-~~y~~~~ 206 (350)
T 4b9d_A 143 DRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV---------------ELARACIGTPYYLSPEICEN-KPYNNKS 206 (350)
T ss_dssp HTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHH---------------HHHHHHHSCCTTCCHHHHTT-CCCCHHH
T ss_pred HCCeeeccCCHHHEEECCCCCEEEcccccceeecCCc---------------ccccccCCCccccCHHHHCC-CCCCcHH
Confidence 9999999999999999999999999999998764221 01245689999999999998 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||+||||++ ||......+....+.. +.+|+.+...++++++||.+||++||.+|||++++|+|||+.+.
T Consensus 207 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~--~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~ 283 (350)
T 4b9d_A 207 DIWALGCVLYELCTLKHAFEAGSMKNLVLKIIS--GSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283 (350)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred HHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHc--CCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence 99999999999997 9988777776666654 34455566788999999999999999999999999999998654
|
| >4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-52 Score=479.87 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=218.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--------- 142 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--------- 142 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCS--SGGGGHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCchh--HHHHHHHHHHHHHhCCCCCCCcEEEEEEE---------
Confidence 5799999999999999999999999999999999865433 24568899999999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|||||||+| +|.+++.. ..+++.+++.++.||+.||+|||++|
T Consensus 143 -------------------------------~~~~~ivmEy~~gg~L~~~l~~-~~l~e~~~~~~~~qi~~aL~ylH~~~ 190 (346)
T 4fih_A 143 -------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 190 (346)
T ss_dssp -------------------------------TTEEEEEECCCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 4678999999974 89988865 57999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
||||||||+||||+.++++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++|||
T Consensus 191 IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiW 254 (346)
T 4fih_A 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIW 254 (346)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHH
T ss_pred cccccCCHHHEEECCCCCEEEecCcCceecCCCC---------------CcccccccCcCcCCHHHHCC-CCCCcHHHHH
Confidence 9999999999999999999999999998653221 11356799999999999987 5699999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|||++ ||......+....+........+.+...++++++||.+||+.||++|||++|+|+||||.+.
T Consensus 255 SlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~ 330 (346)
T 4fih_A 255 SLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 330 (346)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCC
Confidence 99999999997 88877666655554443333445667788999999999999999999999999999999764
|
| >1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-52 Score=482.02 Aligned_cols=298 Identities=16% Similarity=0.239 Sum_probs=253.6
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc----CCCcccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL----GDCPQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~----~~~~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.|+|++||+|.++..+++|++.++++|++|||++|.||+| .+. +.++...++||+|.|++|+.++||||+|
T Consensus 23 ~~~~G~~d~lP~~~~~~~~i~~~i~~~~~~~Gy~eI~tP~le~~el~~~s~~g~~~~~~~~my~~~D~~g~~l~LRpd~T 102 (344)
T 1z7m_A 23 LLPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSITLRYDFT 102 (344)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECTTCCEEEECCCSH
T ss_pred CCCCCcccCCHHHHHHHHHHHHHHHHHHHHcCCEEecCcccCcHHHHhhccCCccccccccEEEEECCCCCEEecCCCCc
Confidence 57899999999999999999999999999999999999999 232 3466788999999999999999999999
Q ss_pred HHHHHHHHhCC-CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 785 LPFIRWAISNQ-KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 785 ~~iaR~~~~~~-~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
+|+||+++++. ..|+|+||+|+|||+|+|+.++ |||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ ++|+|||
T Consensus 103 ~~~aR~~~~~~~~~P~rl~y~g~vfR~e~p~~gR~REF~Q~g~ei~g~~~~~aDaEvi~l~~~~l~~lgl~~-~~i~l~~ 181 (344)
T 1z7m_A 103 LPLVRLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADKSELEILSLALQVIEQLGLNK-TVFEIGS 181 (344)
T ss_dssp HHHHHHHHTCCSCCCEEEEEEEECCCCCC-------CCEEEEEEEESSCHHHHHHHHHHHHHHHHHHHTCSS-EEEEEEE
T ss_pred HHHHHHHHhcCCCCCeEEEEECcEEccCCCCCCCcceeEEEEEEEEcCCCcHHHHHHHHHHHHHHHHCCCCc-EEEEECC
Confidence 99999999874 4699999999999999988654 5699999999999999999999999999999999985 9999999
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHH
Q 001059 863 GDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPR 942 (1170)
Q Consensus 863 ~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~ 942 (1170)
++++++++ |++++.+..++++++++++. ++ ++++.+.+++++.++.+..++ .+ |+ .++++.
T Consensus 182 ~gi~~~~l---g~~~~~~~~l~~~l~~~~~~------------~~-~~~l~~~~l~~~~~~~l~~l~-~~-g~-~~~l~~ 242 (344)
T 1z7m_A 182 AKFFQRLC---QLADGSTELLTELLLKKDLS------------GL-NAFIEKNNFSKELRGLLKEIF-IT-NE-LSRLEN 242 (344)
T ss_dssp HHHHHHHH---HHTTTCHHHHHHHHHTTCHH------------HH-HHHHTTSCCCHHHHHHHHHHT-TC-CC-HHHHHH
T ss_pred HHHHHHHh---CCCHHHHHHHHHHHHhhCHH------------HH-HHHHHhcCCCHHHHHHHHHHH-hc-CC-HHHHHH
Confidence 99999988 67777888899999887732 12 445556789999999999998 45 66 478888
Q ss_pred HhccCCCChhHHHHHHHH-----HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 943 LRGALPADKPTRKALDEL-----YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 943 l~~~~~~~~~~~~~l~~L-----~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
+..+.. +....+++++| +|+.+| ++.||++++||++||||+|||+|..+.+ .+||+|||||+|
T Consensus 243 ~~~l~~-~~~~~~~l~~l~~l~~~L~~~g---~~~~D~~lvrgldYYtG~vFe~~~~~~~--------~~i~~GGRYD~L 310 (344)
T 1z7m_A 243 LVTNTK-DDVLISSFDQLKEFSEKLSMIK---PIIIDLGMVPKMDYYTDLMFKAYSSAAN--------QPILSGGRYDQL 310 (344)
T ss_dssp HHHHTT-CHHHHHHHHHHHHHHHHHTTTS---CCEECTTCCCSSTTCCSEEEEEEETTEE--------EEEEEEEECHHH
T ss_pred HHHhhc-chhhHHHHHHHHHHHHHHhhCC---CEEEeCCCCCCCccCCCeEEEEEECCCC--------CeEeeCccHHHH
Confidence 887553 45566666666 566666 7999999999999999999999986533 389999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhcc
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~ 1053 (1170)
++.|| + ++||||||+|+|||+.+|+
T Consensus 311 ~~~fg-~----------~~pavGfaiglerl~~~l~ 335 (344)
T 1z7m_A 311 LSNFQ-E----------EAFAIGFCCHMDTILKALE 335 (344)
T ss_dssp HHTSS-S----------CCCCEEEEEEHHHHHHHHH
T ss_pred HHHhC-C----------CCCeEEEEEEHHHHHHHHH
Confidence 99886 2 4699999999999998875
|
| >3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-52 Score=469.07 Aligned_cols=258 Identities=28% Similarity=0.422 Sum_probs=215.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++++.||+|+||+||+|++. .+++.||||+++..........++.+|+.+|++++|||||+++++|.+
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------ 97 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQT------ 97 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEE------
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEE------
Confidence 68999999999999999999984 468899999997544333334468899999999999999999998843
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|||||||+ |+|.+++.+.+.+++.+++.++.||+.||+|||
T Consensus 98 ----------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH 143 (304)
T 3ubd_A 98 ----------------------------------EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLH 143 (304)
T ss_dssp ----------------------------------TTEEEEEECCCTTCEEHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEcCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999997 599999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|||||||||+|||++.++++||+|||+|+...... ...++.+||+.|||||++.+ ..|+.++
T Consensus 144 ~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GT~~YmAPE~~~~-~~y~~~~ 207 (304)
T 3ubd_A 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE---------------KKAYSFCGTVEYMAPEVVNR-RGHTQSA 207 (304)
T ss_dssp HTTCCCSSCCGGGEEECTTSCEEEESSEEEEC--------------------CCCCSCCCCGGGCCHHHHHT-SCCCTHH
T ss_pred HCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC---------------ccccccccCcccCCHHHhcc-CCCCCCC
Confidence 9999999999999999999999999999998643211 12345789999999999988 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~ 662 (1170)
|||||||+||||++ ||......+....+......+| ...++++++||++||++||++||| ++|+++|||
T Consensus 208 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~ 284 (304)
T 3ubd_A 208 DWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP---QFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSF 284 (304)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGG
T ss_pred cccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC---CcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCcc
Confidence 99999999999997 9988777777666665544444 356789999999999999999998 589999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
|....|+.+
T Consensus 285 f~~idw~~l 293 (304)
T 3ubd_A 285 FSTIDWNKL 293 (304)
T ss_dssp GTTCCHHHH
T ss_pred ccCCCHHHH
Confidence 999887643
|
| >4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-51 Score=479.25 Aligned_cols=253 Identities=23% Similarity=0.417 Sum_probs=218.0
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~--~~~~~~~Ei~il~~l~HpnIV~l~~~~~~--------- 219 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQ--RRELLFNEVVIMRDYQHENVVEMYNSYLV--------- 219 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCS--SGGGHHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCCCceEEEEEE---------
Confidence 6799999999999999999999999999999999865433 34568899999999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|||||||+ |+|.+++.. ..+++.+++.++.||+.||+|||++|
T Consensus 220 -------------------------------~~~~~iVmEy~~gG~L~~~i~~-~~l~e~~~~~~~~qil~aL~ylH~~~ 267 (423)
T 4fie_A 220 -------------------------------GDELWVVMEFLEGGALTDIVTH-TRMNEEQIAAVCLAVLQALSVLHAQG 267 (423)
T ss_dssp -------------------------------TTEEEEEEECCTTEEHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEeCCCCCcHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 457899999997 489888764 56999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
||||||||+||||+.+|++||+|||+|+.+.... ...++.+||+.|||||++.+ ..|+.++|||
T Consensus 268 IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~---------------~~~~~~~GTp~YmAPEvl~~-~~y~~~~DiW 331 (423)
T 4fie_A 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEV---------------PRRKSLVGTPYWMAPELISR-LPYGPEVDIW 331 (423)
T ss_dssp EECCCCSTTTEEECTTCCEEECCCTTCEECCSSC---------------CCBCCCEECTTTCCHHHHTT-CCBCTHHHHH
T ss_pred eecccCCHHHEEEcCCCCEEEecCccceECCCCC---------------ccccccccCcCcCCHHHHCC-CCCCcHHHHH
Confidence 9999999999999999999999999998653221 12356799999999999988 5699999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||++|||++ ||......+....+........+.+...++++++||.+||+.||.+|||+.|+|+||||.+.
T Consensus 332 SlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~ 407 (423)
T 4fie_A 332 SLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKA 407 (423)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCC
Confidence 99999999997 88877666655554443333344566788999999999999999999999999999999764
|
| >4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-50 Score=474.15 Aligned_cols=267 Identities=25% Similarity=0.389 Sum_probs=222.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|+.++|||||++++++....
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~------- 126 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTV------- 126 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSS-------
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeeccc-------
Confidence 5799999999999999999999999999999999866555556678999999999999999999999874321
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+...+|||||||+|+|.+++...+.+++.+++.++.||+.||+|||++||
T Consensus 127 ---------------------------~~~~~~~~~ivmE~~~g~L~~~i~~~~~l~~~~~~~~~~qil~al~ylH~~~i 179 (398)
T 4b99_A 127 ---------------------------PYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV 179 (398)
T ss_dssp ---------------------------CTTTCCCEEEEEECCSEEHHHHHTSSSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred ---------------------------ccccCCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCcC
Confidence 01234678999999999999999998999999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
|||||||+|||++.++.+||+|||+|+.+...... .....++.+||+.|||||++.+...|+.++||||
T Consensus 180 iHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~-----------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWS 248 (398)
T 4b99_A 180 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE-----------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWS 248 (398)
T ss_dssp BCCCCCGGGEEECTTCCEEECCCTTCBCC------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHH
T ss_pred cCCCcCccccccCCCCCEEEeecceeeecccCccc-----------cccccccceeChHhcCHHHhcCCCCCCChhheeh
Confidence 99999999999999999999999999865322111 0112356799999999999988667899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC----------------------------ccccCCHHHHHHHHHc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP----------------------------SWVAKFSEQESLLRRL 643 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~----------------------------~~~~~~~e~~~LI~~~ 643 (1170)
+|||+|||++ ||.+....+....+....+..+. .+...++++.+||++|
T Consensus 249 lG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~m 328 (398)
T 4b99_A 249 VGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRM 328 (398)
T ss_dssp HHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999997 88777666655555443332221 1234578899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 001059 644 MSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|..||.+|||+.|+|+||||.+.
T Consensus 329 L~~dP~~R~ta~e~L~Hp~f~~~ 351 (398)
T 4b99_A 329 LRFEPSARISAAAALRHPFLAKY 351 (398)
T ss_dssp SCSSTTTSCCHHHHTTSGGGTTT
T ss_pred CcCChhHCcCHHHHhcCHhhCcC
Confidence 99999999999999999999865
|
| >4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-51 Score=466.41 Aligned_cols=249 Identities=24% Similarity=0.337 Sum_probs=206.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.+.|++.++||+|+||+||+|+++.+|+.||||+++.... ..+|+.+|+.++|||||+++++|.+
T Consensus 57 ~~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-------~~~E~~il~~l~HpnIV~l~~~~~~-------- 121 (336)
T 4g3f_A 57 VHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-------RVEELVACAGLSSPRIVPLYGAVRE-------- 121 (336)
T ss_dssp TTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-------CTHHHHTTTTCCCTTBCCEEEEEEE--------
T ss_pred hhheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-------HHHHHHHHHhCCCCCCCcEEEEEEE--------
Confidence 4679999999999999999999999999999999985432 2479999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|||||||+ |+|.+++...+.+++.+++.++.||+.||+|||++
T Consensus 122 --------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~aL~ylH~~ 169 (336)
T 4g3f_A 122 --------------------------------GPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTR 169 (336)
T ss_dssp --------------------------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 467899999997 59999999989999999999999999999999999
Q ss_pred CccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 GIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
|||||||||+||||+.++ ++||+|||+|+.+....... ........+||+.|||||++.+ ..|+.++|
T Consensus 170 ~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~----------~~~~~~~~~GT~~YmAPE~~~~-~~y~~~~D 238 (336)
T 4g3f_A 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK----------SLLTGDYIPGTETHMAPEVVMG-KPCDAKVD 238 (336)
T ss_dssp TEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------------------CCCCCCGGGCCHHHHTT-CCCCTHHH
T ss_pred CceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc----------ceecCCccccCccccCHHHHCC-CCCCcHHH
Confidence 999999999999999987 69999999998764322110 0112344689999999999998 56999999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+||||++ ||......+....+.......+..+..+++++.+||.+||++||.+|||+.|+++|
T Consensus 239 iwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~ 310 (336)
T 4g3f_A 239 IWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASEPPPIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRK 310 (336)
T ss_dssp HHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHSCCGGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcCCCCchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 9999999999997 88766555444444443332233445678899999999999999999999999654
|
| >3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-48 Score=443.63 Aligned_cols=250 Identities=24% Similarity=0.354 Sum_probs=203.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.++||+|+||+||+|+++ ..||||+++....+....+.|.+|+.+|++++|||||++++++.+
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-------- 103 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH---GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-------- 103 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS---SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC---CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC--------
Confidence 468899999999999999999875 359999998766666677889999999999999999999998621
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..+|||||||+ |+|.+++... ..+++.++..++.||+.||+|||+
T Consensus 104 ---------------------------------~~~~iVmEy~~gGsL~~~l~~~~~~l~~~~~~~i~~qia~gL~yLH~ 150 (307)
T 3omv_A 104 ---------------------------------DNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHA 150 (307)
T ss_dssp ---------------------------------SSCEEEEECCSSCBHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CeEEEEEEcCCCCCHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 24689999997 6999999754 579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCCcc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEK 589 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~~k 589 (1170)
++||||||||+||||+.++++||+|||+|+....... ....+..+||+.|||||++.+. ..|+.+
T Consensus 151 ~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~GT~~ymAPE~l~~~~~~~y~~k 217 (307)
T 3omv_A 151 KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSG-------------SQQVEQPTGSVLWMAPEVIRMQDNNPFSFQ 217 (307)
T ss_dssp TTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------------------------CCCCTTSCCHHHHHCCSSCCCCHH
T ss_pred CCccCCccCHHHEEECCCCcEEEeeccCceecccCCc-------------ceeecccccCCCccCHHHhhccCCCCCCcH
Confidence 9999999999999999999999999999986532210 1123456899999999999753 358999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC---CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~---p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||+||||+| ||............+...... +..+..+++++.+||.+||+.||++|||+.+|+++
T Consensus 218 sDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 294 (307)
T 3omv_A 218 SDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSS 294 (307)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHH
T ss_pred HHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999997 887665555444444333222 23445678899999999999999999999998754
|
| >4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-48 Score=440.20 Aligned_cols=248 Identities=23% Similarity=0.347 Sum_probs=205.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.++||+|+||+||+|++. .+|..||||+++. .+....++|.+|+.+|++++|||||+++++|.+
T Consensus 12 r~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--- 86 (299)
T 4asz_A 12 RHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKD--ASDNARKDFHREAELLTNLQHEHIVKFYGVCVE--- 86 (299)
T ss_dssp GGGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECS--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred HHHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCC--CChHHHHHHHHHHHHHHhCCCCCCccEEEEEee---
Confidence 368999999999999999999975 3588999999864 344556789999999999999999999999843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-------------CCCCHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------DHFDKEL 494 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------~~l~e~~ 494 (1170)
...+|||||||+ |+|.+++... ..+++.+
T Consensus 87 -------------------------------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~ 129 (299)
T 4asz_A 87 -------------------------------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQ 129 (299)
T ss_dssp -------------------------------------SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHH
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHH
Confidence 356799999997 6999999754 3599999
Q ss_pred HHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccC
Q 001059 495 AWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574 (1170)
Q Consensus 495 ~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 574 (1170)
++.++.||++||+|||+++||||||||+|||++.++++||+|||+|+........ ......+||+.|
T Consensus 130 ~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-------------~~~~~~~gt~~y 196 (299)
T 4asz_A 130 MLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY-------------RVGGHTMLPIRW 196 (299)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCE-------------EETTTEEECGGG
T ss_pred HHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccceecCCCCce-------------eecCceecChhh
Confidence 9999999999999999999999999999999999999999999999876432211 112345799999
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
||||++.+ ..|+.++|||||||+||||+| ||......+....+.. +..++.+..+++++.+||.+||+.||++
T Consensus 197 mAPE~~~~-~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~--~~~~~~p~~~~~~~~~li~~cl~~dP~~ 273 (299)
T 4asz_A 197 MPPESIMY-RKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQ--GRVLQRPRTCPQEVYELMLGCWQREPHM 273 (299)
T ss_dssp CCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHTCSSGGG
T ss_pred cCHHHHcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCCCCCCccchHHHHHHHHHHcCCChhH
Confidence 99999988 579999999999999999996 8887766665554443 3344445567889999999999999999
Q ss_pred CCCHHHHHh
Q 001059 651 RPSATELLQ 659 (1170)
Q Consensus 651 RPta~eiL~ 659 (1170)
|||+.+|++
T Consensus 274 RPs~~~i~~ 282 (299)
T 4asz_A 274 RKNIKGIHT 282 (299)
T ss_dssp SCCHHHHHH
T ss_pred CcCHHHHHH
Confidence 999999964
|
| >4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-48 Score=439.20 Aligned_cols=250 Identities=21% Similarity=0.281 Sum_probs=207.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++++++++||+|+||+||+|++. .+++.||||+++... .....+.|.+|+.+|++++|||||+++++|.+
T Consensus 25 ~~~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~-~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~--- 100 (308)
T 4gt4_A 25 LSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKA-EGPLREEFRHEAMLRARLQHPNVVCLLGVVTK--- 100 (308)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-C-CC-CHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHHCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECccc-ChHHHHHHHHHHHHHHhCCCCCCCCcceEEEE---
Confidence 467899999999999999999974 357899999997443 33445789999999999999999999999843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCCC
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 491 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 491 (1170)
...+|||||||+ |+|.++|... ..++
T Consensus 101 -------------------------------------~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~ 143 (308)
T 4gt4_A 101 -------------------------------------DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143 (308)
T ss_dssp -------------------------------------SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCC
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCC
Confidence 345699999997 6999999643 3589
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+.++..++.||+.||+|||+++||||||||+||||++++++||+|||+|+.+...... ...+..+||
T Consensus 144 ~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFGlar~~~~~~~~-------------~~~~~~~gt 210 (308)
T 4gt4_A 144 PPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYY-------------KLLGNSLLP 210 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSCCBCGGGGGGCB-------------CSSSSSCBC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcccceeccCCCce-------------eEecccccC
Confidence 9999999999999999999999999999999999999999999999999876432211 112456899
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
+.|||||++.+ ..|+.++|||||||+||||+| ||......+....+. .+..++.+..+++++.+||.+||+.|
T Consensus 211 ~~ymAPE~l~~-~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~~~~li~~C~~~d 287 (308)
T 4gt4_A 211 IRWMAPEAIMY-GKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIR--NRQVLPCPDDCPAWVYALMIECWNEF 287 (308)
T ss_dssp GGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred CcccCHHHHhC-CCCCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCcccchHHHHHHHHHHcCCC
Confidence 99999999987 579999999999999999986 887766655544433 34444555677889999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+|||+.+|+++
T Consensus 288 P~~RPs~~ei~~~ 300 (308)
T 4gt4_A 288 PSRRPRFKDIHSR 300 (308)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhHCcCHHHHHHH
Confidence 9999999999875
|
| >4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-47 Score=440.27 Aligned_cols=249 Identities=24% Similarity=0.334 Sum_probs=201.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.++||+|+||+||+|+++ .+++.||||+++. .+....++|.+|+.+|++++|||||+++++|.+
T Consensus 40 ~~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~--~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~--- 114 (329)
T 4aoj_A 40 RRDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKE--ASESARQDFQREAELLTMLQHQHIVRFFGVCTE--- 114 (329)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESC--CSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred HHHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECc--CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE---
Confidence 368999999999999999999975 3688999999863 344556789999999999999999999999843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---------------CCCCH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY---------------DHFDK 492 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~---------------~~l~e 492 (1170)
...+|||||||+ |+|.+++... .++++
T Consensus 115 -------------------------------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~ 157 (329)
T 4aoj_A 115 -------------------------------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGL 157 (329)
T ss_dssp -------------------------------------SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCH
T ss_pred -------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCH
Confidence 356899999997 6999998753 35899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCc
Q 001059 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572 (1170)
Q Consensus 493 ~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 572 (1170)
.+++.++.||+.||+|||+++||||||||+||||+.++++||+|||+|+.+..... ....+..+||+
T Consensus 158 ~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla~~~~~~~~-------------~~~~~~~~gt~ 224 (329)
T 4aoj_A 158 GQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDY-------------YRVGGRTMLPI 224 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-----------------------------CCCCG
T ss_pred HHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccceeccCCCc-------------ceecCcccccc
Confidence 99999999999999999999999999999999999999999999999986532211 11123468999
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 648 (1170)
.|||||++.+ ..|+.++|||||||+||||+| ||......+....+.. +..++.+..+++++.+||.+||+.||
T Consensus 225 ~ymAPE~~~~-~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~--g~~~~~p~~~~~~~~~li~~cl~~dP 301 (329)
T 4aoj_A 225 RWMPPESILY-RKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQ--GRELERPRACPPEVYAIMRGCWQREP 301 (329)
T ss_dssp GGCCHHHHTT-CCCCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHCCSST
T ss_pred cccChhhhcC-CCCCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHc--CCCCCCcccccHHHHHHHHHHcCcCh
Confidence 9999999998 679999999999999999986 8877666665544433 33344445678899999999999999
Q ss_pred CCCCCHHHHHhc
Q 001059 649 SDRPSATELLQD 660 (1170)
Q Consensus 649 ~~RPta~eiL~~ 660 (1170)
++|||+.+|+++
T Consensus 302 ~~RPs~~ei~~~ 313 (329)
T 4aoj_A 302 QQRHSIKDVHAR 313 (329)
T ss_dssp TTSCCHHHHHHH
T ss_pred hHCcCHHHHHHH
Confidence 999999999875
|
| >3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-47 Score=468.42 Aligned_cols=259 Identities=27% Similarity=0.381 Sum_probs=215.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC----CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD----KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~----~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.+++|+++++||+|+||+||+|+++.+|+.||||+++... ..........+++.+++.++|||||+++++|.
T Consensus 187 slddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~---- 262 (689)
T 3v5w_A 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFH---- 262 (689)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEE----
T ss_pred chHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEE----
Confidence 4689999999999999999999999999999999997532 11111222334466777789999999999883
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
+..++|||||||+ |+|.+++.+.+.+++..++.|+.||+.||+
T Consensus 263 ------------------------------------~~~~lylVmEy~~GGdL~~~l~~~~~l~E~~a~~y~~qIl~aL~ 306 (689)
T 3v5w_A 263 ------------------------------------TPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLE 306 (689)
T ss_dssp ------------------------------------CSSEEEEEECCCCSCBHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------ECCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3568999999996 699999999999999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++|||||||||+||||+.+|++||+|||+|+.+... ...+.+|||.|||||++.+...|+
T Consensus 307 yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~-----------------~~~t~~GTp~YmAPEvl~~~~~y~ 369 (689)
T 3v5w_A 307 HMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYD 369 (689)
T ss_dssp HHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC-----------------CCCSCCSCGGGCCHHHHSTTCCCC
T ss_pred HHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCC-----------------CCCCccCCcCccCHHHHhCCCCCC
Confidence 999999999999999999999999999999999865321 124569999999999997545699
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATE 656 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~e 656 (1170)
.++|||||||+||||++ ||..... .+....+......+| ...++++++||.+||+.||.+|++ +++
T Consensus 370 ~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p---~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~e 446 (689)
T 3v5w_A 370 SSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP---DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQE 446 (689)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC---ccCCHHHHHHHHHHccCCHhHCCCCCCCCHHH
Confidence 99999999999999997 8865432 223333333333333 356789999999999999999998 899
Q ss_pred HHhccCCCCchHHHH
Q 001059 657 LLQDALPPQMEYELL 671 (1170)
Q Consensus 657 iL~~~~~~~~~~~~~ 671 (1170)
|++||||....|+.+
T Consensus 447 i~~HpfF~~idW~~l 461 (689)
T 3v5w_A 447 VKESPFFRSLDWQMV 461 (689)
T ss_dssp HTTSGGGTTCCHHHH
T ss_pred HhcCccccCCCHHHH
Confidence 999999999998765
|
| >4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-47 Score=438.52 Aligned_cols=252 Identities=24% Similarity=0.331 Sum_probs=207.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC-CCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H-pnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|++..+ ++.||||+++.. ......+.+.+|+.+|++++| ||||+++++|.+.
T Consensus 63 ~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~-~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~- 140 (353)
T 4ase_A 63 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 140 (353)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred HHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEec-
Confidence 37899999999999999999998754 368999999743 334456789999999999965 9999999998432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCC
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHF 490 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l 490 (1170)
...+|||||||+ |+|.++|+.. ..+
T Consensus 141 --------------------------------------~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l 182 (353)
T 4ase_A 141 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 182 (353)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCB
T ss_pred --------------------------------------CCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccC
Confidence 245799999997 6999999753 348
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
++..+..++.||+.||+|||+++||||||||+|||++.++++||+|||+|+.+.... .....+..+|
T Consensus 183 ~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~DFGlar~~~~~~-------------~~~~~~~~~g 249 (353)
T 4ase_A 183 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARL 249 (353)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------TSEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECcchhhhhcccCC-------------Cceeeccccc
Confidence 999999999999999999999999999999999999999999999999998653221 0112245689
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCC
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
|+.|||||++.+ ..|+.++|||||||+||||+| ||......+.....+. .+..++.+..+++++.+||.+||+.
T Consensus 250 t~~ymAPE~l~~-~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~-~g~~~~~p~~~~~~~~~li~~c~~~ 327 (353)
T 4ase_A 250 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHG 327 (353)
T ss_dssp CGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred cccccCHHHHhc-CCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHH-cCCCCCCCccCCHHHHHHHHHHcCc
Confidence 999999999988 579999999999999999986 8876544444444444 3334444456788999999999999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
||.+|||+.+|++|
T Consensus 328 dP~~RPt~~eil~~ 341 (353)
T 4ase_A 328 EPSQRPTFSELVEH 341 (353)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred ChhHCcCHHHHHHH
Confidence 99999999999987
|
| >4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-46 Score=436.73 Aligned_cols=267 Identities=22% Similarity=0.323 Sum_probs=202.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.|++.++||+|+||+||+|+++ .+++.||||++.... ...++.+|+.+|+.+ +|||||+++++|.+
T Consensus 20 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~----~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~---- 91 (361)
T 4f9c_A 20 SNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTS----HPIRIAAELQCLTVAGGQDNVMGVKYCFRK---- 91 (361)
T ss_dssp GGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTS----CHHHHHHHHHHHHHTCSBTTBCCCSEEEEE----
T ss_pred cCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEcccc----CHHHHHHHHHHHHHhcCCCCCceEEEEEEE----
Confidence 367999999999999999999986 357899999986432 235688999999998 69999999988743
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
..++|+|||||+ ++|.+++. .+++.+++.++.||+.||+|
T Consensus 92 ------------------------------------~~~~~lvmE~~~g~~L~~~~~---~l~~~~~~~~~~qll~al~y 132 (361)
T 4f9c_A 92 ------------------------------------NDHVVIAMPYLEHESFLDILN---SLSFQEVREYMLNLFKALKR 132 (361)
T ss_dssp ------------------------------------TTEEEEEEECCCCCCHHHHHT---TCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCcccHHHHHc---CCCHHHHHHHHHHHHHHHHH
Confidence 467899999997 58999884 59999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCC-------CCCC------CCccccCcccccCccC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAF-------PTDT------GGVSVDGTGQVGTYFY 574 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~-------~~~~------~~~~~~~~~~~GT~~Y 574 (1170)
||++|||||||||+|||++.+ +.+||+|||+|+............. .... .......++.+||+.|
T Consensus 133 lH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 212 (361)
T 4f9c_A 133 IHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGF 212 (361)
T ss_dssp HHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC--------------------------CCCCGGG
T ss_pred HHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCccccccccccccccccccccccccccccccccccccccCccc
Confidence 999999999999999999877 7999999999986543211100000 0000 0001123456899999
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHH-HHHHhhh-----------------------------
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQI-VLSDLKQ----------------------------- 621 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~-~~~~l~~----------------------------- 621 (1170)
||||++.+.+.|+.++||||+||++|||++ ||....+... ...+...
T Consensus 213 ~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~ 292 (361)
T 4f9c_A 213 RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLR 292 (361)
T ss_dssp CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHH
T ss_pred cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhh
Confidence 999999886679999999999999999997 8865433221 1111100
Q ss_pred ----------------------cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 622 ----------------------KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 622 ----------------------~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.......+...++++.+||++||..||++|||++|+|+||||+.+.
T Consensus 293 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~is~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i~ 360 (361)
T 4f9c_A 293 KLCERLRGMDSSTPKLTSDIQGHATNLEGWNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFFKDMS 360 (361)
T ss_dssp HHHHHHC----------------------CTTCCHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC-
T ss_pred HHHHhhccccccccccccccccccccccccccCCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCCC
Confidence 0001123456778999999999999999999999999999998753
|
| >3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-45 Score=455.09 Aligned_cols=258 Identities=23% Similarity=0.419 Sum_probs=222.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...+++|++++.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|+.++|||||+++++|.
T Consensus 153 ~~il~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~--~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~------ 224 (573)
T 3uto_A 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFE------ 224 (573)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEE------
T ss_pred CcCccccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc--hhhHHHHHHHHHHHHhCCCCCCCeEEEEEE------
Confidence 345789999999999999999999999999999999997543 334567899999999999999999999983
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...+|||||||+ |+|.+++.. .+.+++.+++.++.||+.||+|
T Consensus 225 ----------------------------------~~~~~~iv~E~~~gg~L~~~i~~~~~~l~e~~~~~~~~qi~~al~y 270 (573)
T 3uto_A 225 ----------------------------------DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCH 270 (573)
T ss_dssp ----------------------------------CSSEEEEEEECCCCCBHHHHHTCTTSCEEHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------ECCEEEEEEeecCCCcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHH
Confidence 2467899999996 599998864 4679999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC--CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
||++||+||||||+|||++.+ +.+||+|||+|+.+.... .....+||+.|||||++.+ ..|
T Consensus 271 lH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~----------------~~~~~~GT~~y~APEv~~~-~~y 333 (573)
T 3uto_A 271 MHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------SVKVTTGTAEFAAPEVAEG-KPV 333 (573)
T ss_dssp HHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTS----------------EEEEECSSGGGCCHHHHTT-CCB
T ss_pred HHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCC----------------ceeeeEECccccCHHHhCC-CCC
Confidence 999999999999999999864 899999999998764221 1245689999999999998 569
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++|||||||+||||++ ||......+....+......++ +.+...++++++||++||+.||.+|||+.|+|+|||
T Consensus 334 ~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw 413 (573)
T 3uto_A 334 GYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPW 413 (573)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred CcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcC
Confidence 999999999999999996 8988777777666665555554 355678899999999999999999999999999999
Q ss_pred CCCch
Q 001059 663 PPQME 667 (1170)
Q Consensus 663 ~~~~~ 667 (1170)
|....
T Consensus 414 ~~~~~ 418 (573)
T 3uto_A 414 LTPGN 418 (573)
T ss_dssp TSCCC
T ss_pred cCCCC
Confidence 98653
|
| >1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-45 Score=410.04 Aligned_cols=263 Identities=17% Similarity=0.201 Sum_probs=216.6
Q ss_pred hhHHhHHH--HHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHh-CCC-CceeEEEec
Q 001059 730 DYVVQVTK--EMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAIS-NQK-SSFKRYEIS 805 (1170)
Q Consensus 730 ~~I~~~i~--~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~-~~~-~P~r~~Y~g 805 (1170)
.++++.++ ++|++|||++|.||+|........ + +|.|++|+.++||||+|+|+| .-.. +.. .|+|+||+|
T Consensus 4 ~~le~~~r~~~~~~~~Gy~eI~tP~le~~~l~~~--d---~f~d~~g~~l~LRpd~T~~~a-~~~~~~~~~~p~R~~y~g 77 (275)
T 1usy_A 4 LDFEKVFSFYSKATKKGFSPFFVPALEKAEEPAG--N---FFLDRKGNLFSIREDFTKTVL-NHRKRYSPDSQIKVWYAD 77 (275)
T ss_dssp CCHHHHHHHHHHHHHTTCEECCCCSEEECSSCCS--S---CEEETTSCEEEECCCHHHHHH-HHHTTCTTCCCEEEECCE
T ss_pred HhHHHHHHHHHHHHHCCCEEecCccccchhhhcc--c---ccCCCCCCEEEeCCcChHHHH-HHHhhcCCCCceEEEEec
Confidence 35677777 999999999999999944433221 2 568999999999999999999 2211 225 799999999
Q ss_pred CeEEcCCCCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHH
Q 001059 806 SVYRRAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAE 885 (1170)
Q Consensus 806 ~VfR~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~ 885 (1170)
+|||+|+|+. |||+|+|+|+||.+++.+|+|+|.++.++|+.+|+.+ ++|+|||+++++.+++. +++++++.+++
T Consensus 78 ~vfR~e~~~~--Ref~Q~g~ei~g~~~~~~DaEvi~l~~~~l~~lgl~~-~~i~l~~~~~~~~~~~~--~~~~~~~~l~~ 152 (275)
T 1usy_A 78 FVYRYSGSDL--VAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGP-VIVEIGHTGVYEDLLKE--IPKDLHEKVLN 152 (275)
T ss_dssp EEEEEETTEE--EEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHCCSC-EEEEEEETTHHHHHHTT--SCGGGHHHHHH
T ss_pred eEEecCCCCC--CeeeEeCEEEecCCCchhHHHHHHHHHHHHHHcCCCC-eEEEeCCHHHHHHHHHh--CCHHHHHHHHH
Confidence 9999999988 8899999999999999999999999999999999975 99999999999999875 77778888989
Q ss_pred HHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHH--HHH
Q 001059 886 LLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL--YLR 963 (1170)
Q Consensus 886 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L--~l~ 963 (1170)
+++++++ . ++ ++.+..++++++.++.+..++ .+.|.+ ++++. +..++...+.++.+ +++
T Consensus 153 ~l~~~~~---------~---~~-~~~l~~~~l~~~~~~~l~~l~-~~~g~~-~~l~~----l~~~~~~l~~l~~l~~~l~ 213 (275)
T 1usy_A 153 LIDTKNL---------A---EI-EFLSHMKKIDLSRVEKIIEDS-IYRRSP-EHLKT----MDLPLSVREDLLSASSFLQ 213 (275)
T ss_dssp HHHTTCH---------H---HH-HHHHHHTCCCCTHHHHHHHHH-HHCCSG-GGGGT----SCCCHHHHHHHHHHHHHHH
T ss_pred HHHccCH---------H---HH-HHHHHhcCCCHHHHHHHHHHH-HhhCCH-HHHHH----HhcCHHHHHHHHHHHHHHH
Confidence 9988773 1 22 445666889888899999998 566653 44443 34455667777777 888
Q ss_pred -HccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceEEe
Q 001059 964 -IWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGAS 1042 (1170)
Q Consensus 964 -~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfa 1042 (1170)
.+| ..++.||++++||++||||+|||+|..+.+ ++||+|||||+| ++||||||
T Consensus 214 ~~~g-~~~~~~D~~lvRgldYYtG~vFe~~~~~~~--------~~i~~GGRYD~l-----------------~~pavGfs 267 (275)
T 1usy_A 214 EKFP-TVSVEIDLTLARTIEEYCGLIFTIYDTSSS--------RLVAAGGEYTVN-----------------GEKGVGGS 267 (275)
T ss_dssp HHCS-SSEEEECCCCGGGGGTCSSEEEEEEETTTT--------EEEEEEEEEEET-----------------TEEEEEEE
T ss_pred HhcC-CCeEEEeccccCCCCccCCeEEEEEECCCC--------CeEeeecCCCCC-----------------CCCEEEEE
Confidence 888 568999999999999999999999986433 489999999997 35999999
Q ss_pred ccHHHH
Q 001059 1043 LALETI 1048 (1170)
Q Consensus 1043 iglerL 1048 (1170)
+|+||+
T Consensus 268 ig~er~ 273 (275)
T 1usy_A 268 IFLEGK 273 (275)
T ss_dssp EEEEEE
T ss_pred EEeecc
Confidence 999986
|
| >3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-44 Score=411.56 Aligned_cols=253 Identities=22% Similarity=0.278 Sum_probs=188.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|.+.++||+|+||+||+|++ +|+.||||+++... .....+..|+..+.+++|||||+++++|.+.+
T Consensus 3 r~i~L~~~iG~G~fG~Vy~~~~--~g~~VAvK~l~~~~---~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~------- 70 (303)
T 3hmm_A 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDN------- 70 (303)
T ss_dssp GGEEEEEEEEECSSSEEEEEEE--TTEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-------
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc---hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC-------
Confidence 5788999999999999999988 49999999986432 11222334666667889999999999986531
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ- 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~- 512 (1170)
.....+|||||||+ |+|.++++. .+++++.+.+++.|++.||+|||++
T Consensus 71 -----------------------------~~~~~~~lV~Ey~~~gsL~~~l~~-~~l~~~~~~~i~~~ia~gl~ylH~~~ 120 (303)
T 3hmm_A 71 -----------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAHLHMEI 120 (303)
T ss_dssp -----------------------------SSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHHCCB
T ss_pred -----------------------------CCceEEEEEecCCCCCcHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 11346899999997 699999975 4699999999999999999999987
Q ss_pred -------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-
Q 001059 513 -------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP- 584 (1170)
Q Consensus 513 -------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~- 584 (1170)
+||||||||+||||+.++++||+|||+|+........ ......+.+||+.|||||++.+..
T Consensus 121 ~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~-----------~~~~~~~~~GT~~ymAPE~l~~~~~ 189 (303)
T 3hmm_A 121 VGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLDDSIN 189 (303)
T ss_dssp CSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------ESCC-----CCGGGCCHHHHTTCSC
T ss_pred hhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCc-----------eeeecccccccccccCHHHhccccc
Confidence 8999999999999999999999999999875422110 011224568999999999997632
Q ss_pred ----CCCccchhHHHHHHHHHhhc---CCC----------ch----hHHHHHHHHhhhcCC---CCCcccc--CCHHHHH
Q 001059 585 ----KIDEKADMYSLGIVFFELWH---PFS----------TA----MERQIVLSDLKQKGE---LPPSWVA--KFSEQES 638 (1170)
Q Consensus 585 ----~~~~ksDIwSlGviL~ELlt---Pf~----------~~----~~~~~~~~~l~~~~~---~p~~~~~--~~~e~~~ 638 (1170)
.|+.++|||||||+||||+| ||. .. ...+.....+..... +|..+.. .++.+.+
T Consensus 190 ~~~~~~~~k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~ 269 (303)
T 3hmm_A 190 MKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAK 269 (303)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHH
T ss_pred ccCCccChhHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHH
Confidence 36789999999999999996 221 11 011222222222222 2222221 2246789
Q ss_pred HHHHccCCCCCCCCCHHHHHhc
Q 001059 639 LLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||.+||+.||++|||+.+|++.
T Consensus 270 li~~cl~~dP~~RPt~~ei~~~ 291 (303)
T 3hmm_A 270 IMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp HHHTTCCSSGGGSCCHHHHHHH
T ss_pred HHHHHcccCHhHCcCHHHHHHH
Confidence 9999999999999999999874
|
| >3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-43 Score=405.89 Aligned_cols=255 Identities=27% Similarity=0.441 Sum_probs=221.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++|++++.||+|+||+||+|++..+|+.||||++..........+.+.+|+.+|+.++||||+++++++..
T Consensus 13 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~------- 85 (328)
T 3fe3_A 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIET------- 85 (328)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred ccCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE-------
Confidence 4689999999999999999999999999999999998766666667789999999999999999999998732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||+
T Consensus 86 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~ 132 (328)
T 3fe3_A 86 ---------------------------------EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQ 132 (328)
T ss_dssp ---------------------------------SSEEEEEECCCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEECCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999888899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+....+.++|
T Consensus 133 ~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~~D 196 (328)
T 3fe3_A 133 KRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG----------------KLDAFCGAPPYAAPELFQGKKYDGPEVD 196 (328)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC----------------GGGTTSSSGGGCCHHHHHTCCCCSHHHH
T ss_pred CCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC----------------ccccccCCcceeCcccccCCCcCCchhh
Confidence 999999999999999999999999999998653211 1244689999999999998544568999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||||++|+|++ ||......+...........+|. ..++++.+||++||+.||.+|||++++++|||+...
T Consensus 197 iwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 271 (328)
T 3fe3_A 197 VWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF---YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAG 271 (328)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTT
T ss_pred hhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCC
Confidence 9999999999997 88877666666555554444443 356799999999999999999999999999999764
|
| >3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A | Back alignment and structure |
|---|
Probab=100.00 E-value=8.9e-43 Score=392.83 Aligned_cols=259 Identities=27% Similarity=0.454 Sum_probs=212.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||+++...........+.+|+.++++++||||++++++|.+
T Consensus 1 l~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 72 (292)
T 3o0g_A 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------- 72 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred CCCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEe--------
Confidence 468999999999999999999999999999999998766655566789999999999999999999998743
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||++++.+.+.. .+.+++..++.++.||+.||+|||++
T Consensus 73 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~ 120 (292)
T 3o0g_A 73 --------------------------------DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120 (292)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEEecCCCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 457899999999988877765 56799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++||
T Consensus 121 ~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 185 (292)
T 3o0g_A 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185 (292)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECCSCC---------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEeecccceecCCcc---------------ccccCCccccCCcChHHHcCCCCcCchHHH
Confidence 99999999999999999999999999998653211 112445799999999999875568999999
Q ss_pred HHHHHHHHHhhc---CCC-chhHHHHHHHHhhhcCCCC--------------------------CccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFS-TAMERQIVLSDLKQKGELP--------------------------PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~-~~~~~~~~~~~l~~~~~~p--------------------------~~~~~~~~e~~~LI~~ 642 (1170)
|||||++|+|++ ||. ..........+....+..+ ......++++.+||++
T Consensus 186 wslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 265 (292)
T 3o0g_A 186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN 265 (292)
T ss_dssp HHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHH
Confidence 999999999996 543 3333333333222111110 1112456789999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||++++|+||||....
T Consensus 266 ~L~~dP~~R~t~~e~l~hp~f~~~~ 290 (292)
T 3o0g_A 266 LLKCNPVQRISAEEALQHPYFSDFC 290 (292)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred HhccChhhCCCHHHHhcCcccccCC
Confidence 9999999999999999999998764
|
| >3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-43 Score=398.90 Aligned_cols=310 Identities=35% Similarity=0.676 Sum_probs=222.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
++++++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+.+|+.+|++++||||++++++|.+.....
T Consensus 2 s~~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 80 (332)
T 3qd2_B 2 SRYLTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPN-RELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEK 80 (332)
T ss_dssp CHHHHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCS-TTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCH
T ss_pred chhhhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCC-chhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccch
Confidence 678899999999999999999999999999999999998654 3345578999999999999999999999997653100
Q ss_pred cC--CCCCCCCC-----ccc------ccccc----cccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC---
Q 001059 431 FD--GDSMWGSG-----TLA------SSTFS----NRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH--- 489 (1170)
Q Consensus 431 ~~--~~~~~~~g-----~~~------~~~~~----~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~--- 489 (1170)
+. .+..|... .+. ..... ........+..........++|++||||++ +|.+++.....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~ 160 (332)
T 3qd2_B 81 WQEEMDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLED 160 (332)
T ss_dssp HHHHHHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGG
T ss_pred hhhhhhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccc
Confidence 00 00000000 000 00000 000000000001111234579999999974 99999986543
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
.++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++............. ...........+
T Consensus 161 ~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~---~~~~~~~~~~~~ 237 (332)
T 3qd2_B 161 REHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT---PMPAYATHTGQV 237 (332)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC-----------------CCCSCC
T ss_pred hhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccc---cccccccccccC
Confidence 56677999999999999999999999999999999999999999999999987643321110000 000011234568
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
||+.|+|||++.+ ..++.++|||||||++|||++|+.+............ ....|..+...++++.+||.+||+.||.
T Consensus 238 gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~ 315 (332)
T 3qd2_B 238 GTKLYMSPEQIHG-NNYSHKVDIFSLGLILFELLYSFSTQMERVRIITDVR-NLKFPLLFTQKYPQEHMMVQDMLSPSPT 315 (332)
T ss_dssp -CGGGSCHHHHHC-CCCCTHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHH-TTCCCHHHHHHCHHHHHHHHHHHCSSGG
T ss_pred CCcCccChHHhcC-CCCcchhhHHHHHHHHHHHHHcCCChhHHHHHHHHhh-ccCCCcccccCChhHHHHHHHHccCCCC
Confidence 9999999999988 5789999999999999999999887665554444433 4556666667778999999999999999
Q ss_pred CCCCHHHHHhccCCCCc
Q 001059 650 DRPSATELLQDALPPQM 666 (1170)
Q Consensus 650 ~RPta~eiL~~~~~~~~ 666 (1170)
+|||+.++++||||.++
T Consensus 316 ~Rps~~~~l~~~~f~~~ 332 (332)
T 3qd2_B 316 ERPEATDIIENAIFENL 332 (332)
T ss_dssp GSCCHHHHHHSTTCCCC
T ss_pred cCCCHHHHhhchhhhcC
Confidence 99999999999999864
|
| >2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=402.75 Aligned_cols=262 Identities=23% Similarity=0.364 Sum_probs=223.1
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhccCCCceeEEEEEeec
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
....++|++.+.||+|+||+||+|+++.+|+.||||+++...... ...+.+.+|+.+|+.++||||++++++|.+
T Consensus 8 ~~~~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~- 86 (361)
T 2yab_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYEN- 86 (361)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-
T ss_pred CChhhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEe-
Confidence 345578999999999999999999999999999999998654321 134678999999999999999999998732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 87 ---------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~a 127 (361)
T 2yab_A 87 ---------------------------------------RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127 (361)
T ss_dssp ---------------------------------------SSEEEEEEECCCSCBHHHHHTTCSCCBHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 457899999995 6999999888889999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCC----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+|||++||+||||||+|||++.++ .+||+|||+++...... .....+||+.|+|||++.
T Consensus 128 L~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 191 (361)
T 2yab_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----------------EFKNIFGTPEFVAPEIVN 191 (361)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTC----------------CCCCCCSCGGGCCHHHHT
T ss_pred HHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCC----------------ccccCCCCccEECchHHc
Confidence 9999999999999999999998876 79999999998653211 123467999999999998
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+ ..|+.++|||||||++|+|++ ||......+....+......+++ .+...++++++||++||..||.+|||+.++
T Consensus 192 ~-~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~ 270 (361)
T 2yab_A 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEA 270 (361)
T ss_dssp T-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHH
T ss_pred C-CCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 7 568999999999999999996 88777666666655554444443 456778899999999999999999999999
Q ss_pred HhccCCCCchHH
Q 001059 658 LQDALPPQMEYE 669 (1170)
Q Consensus 658 L~~~~~~~~~~~ 669 (1170)
++|||+....+.
T Consensus 271 l~hp~~~~~~~~ 282 (361)
T 2yab_A 271 LRHPWITPVDTQ 282 (361)
T ss_dssp HTSTTTSCSSHH
T ss_pred hcCcCcCCCchh
Confidence 999999977543
|
| >1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-42 Score=399.79 Aligned_cols=259 Identities=27% Similarity=0.391 Sum_probs=220.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 4 ~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~------- 76 (337)
T 1o6l_A 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQT------- 76 (337)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEEC-------
T ss_pred hHHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEe-------
Confidence 5799999999999999999999999999999999975321 11234578899999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~ 123 (337)
T 1o6l_A 77 ---------------------------------HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHS 123 (337)
T ss_dssp ---------------------------------SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999988899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..++.++|
T Consensus 124 ~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 187 (337)
T 1o6l_A 124 RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAVD 187 (337)
T ss_dssp TTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---------------CCBCCCEECGGGCCGGGGSS-SCBCTTHH
T ss_pred CCeecCcCCHHHEEECCCCCEEEeeccchhhcccCC---------------CcccccccChhhCChhhhcC-CCCCchhh
Confidence 999999999999999999999999999997532110 11245689999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~ 663 (1170)
||||||++|||++ ||...........+......+|. ..++++.+||++||+.||.+|| ++.++++|+||
T Consensus 188 iwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f 264 (337)
T 1o6l_A 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPR---TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFF 264 (337)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGG
T ss_pred cccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCc
Confidence 9999999999996 88776666555555554444443 4578999999999999999999 99999999999
Q ss_pred CCchHHHH
Q 001059 664 PQMEYELL 671 (1170)
Q Consensus 664 ~~~~~~~~ 671 (1170)
....+..+
T Consensus 265 ~~~~~~~~ 272 (337)
T 1o6l_A 265 LSINWQDV 272 (337)
T ss_dssp TTCCHHHH
T ss_pred CCCCHHHH
Confidence 99887644
|
| >3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-42 Score=394.35 Aligned_cols=261 Identities=25% Similarity=0.445 Sum_probs=209.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
....++|++++.||+|+||+||+|++. +|+.||+|+++...........+.+|+.+|+.++||||++++++|.+
T Consensus 17 q~l~~~y~~~~~lG~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~----- 90 (311)
T 3niz_A 17 QGLMEKYQKLEKVGEGTYGVVYKAKDS-QGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHS----- 90 (311)
T ss_dssp ECSSCEEEEEEEEEECSSCEEEEEEET-TSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECC-----
T ss_pred cchHhhhHhhhhccCCCCeEEEEEEEC-CCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEcc-----
Confidence 345689999999999999999999996 69999999997655544456788999999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+++|.+.+.... .+++..++.++.||+.||+||
T Consensus 91 -----------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~L 135 (311)
T 3niz_A 91 -----------------------------------ERCLTLVFEFMEKDLKKVLDENKTGLQDSQIKIYLYQLLRGVAHC 135 (311)
T ss_dssp -----------------------------------SSCEEEEEECCSEEHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 35689999999999998887654 599999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++...... ...+..+||+.|+|||++.+...++.+
T Consensus 136 H~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~ 200 (311)
T 3niz_A 136 HQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPV---------------RSYTHEVVTLWYRAPDVLMGSKKYSTS 200 (311)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCC---------------C---CCCCCCTTCCHHHHTTCCSCCTH
T ss_pred HHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCc---------------ccccCCcccCCcCCHHHhcCCCCCCch
Confidence 99999999999999999999999999999998653211 112345789999999999875678999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CC--------------------------ccccCCHHHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PP--------------------------SWVAKFSEQESL 639 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~--------------------------~~~~~~~e~~~L 639 (1170)
+|||||||++|+|++ ||...........+....+.. +. .....++++.+|
T Consensus 201 ~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 280 (311)
T 3niz_A 201 VDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDL 280 (311)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHH
T ss_pred HHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhhhccchhhhcccccccCCcHHHhCcccCHHHHHH
Confidence 999999999999997 776554433333322211111 11 112356788999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|++||+.||.+|||+.++|+||||....
T Consensus 281 i~~~L~~dP~~Rpt~~ell~hp~f~~~~ 308 (311)
T 3niz_A 281 LSNMLCFDPNKRISARDAMNHPYFKDLD 308 (311)
T ss_dssp HHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred HHHHcCCChhHCCCHHHHhcCcccccCC
Confidence 9999999999999999999999998765
|
| >3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-42 Score=404.58 Aligned_cols=261 Identities=25% Similarity=0.400 Sum_probs=217.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
..+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~---- 95 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQT---- 95 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEEC----
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEe----
Confidence 346899999999999999999999999999999999975321 122345688999999988 79999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 96 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 139 (353)
T 3txo_A 96 ------------------------------------PDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALMF 139 (353)
T ss_dssp ------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 140 LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 203 (353)
T 3txo_A 140 LHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---------------VTTATFCGTPDYIAPEILQE-MLYGP 203 (353)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------------------------CCGGGCCHHHHHH-HHCTT
T ss_pred HHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC---------------ccccccCCCcCeEChhhcCC-CCcCC
Confidence 999999999999999999999999999999997532111 12245689999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH------HHHHh
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA------TELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta------~eiL~ 659 (1170)
++|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||++ .++++
T Consensus 204 ~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 204 AVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT---WLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred ccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 9999999999999996 88877777766666665555543 356799999999999999999999 99999
Q ss_pred ccCCCCchHHHH
Q 001059 660 DALPPQMEYELL 671 (1170)
Q Consensus 660 ~~~~~~~~~~~~ 671 (1170)
||||....|..+
T Consensus 281 hp~f~~~~w~~l 292 (353)
T 3txo_A 281 HPFFKEIDWAQL 292 (353)
T ss_dssp SGGGTTCCHHHH
T ss_pred CCcccCCCHHHH
Confidence 999999987654
|
| >3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-42 Score=411.43 Aligned_cols=260 Identities=25% Similarity=0.435 Sum_probs=222.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..++.++|++.+.||+|+||+||+|.++.+|+.||+|++..........+.+.+|+.+|+.++||||++++++|.+
T Consensus 6 ~~~~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~---- 81 (444)
T 3soa_A 6 CTRFTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISE---- 81 (444)
T ss_dssp -CHHHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEEC----
T ss_pred cccccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEE----
Confidence 4567789999999999999999999999999999999998766555566789999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+.+.....+++..++.++.||+.||+|
T Consensus 82 ------------------------------------~~~~~lv~E~~~gg~L~~~i~~~~~~~e~~~~~i~~qil~aL~~ 125 (444)
T 3soa_A 82 ------------------------------------EGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLH 125 (444)
T ss_dssp ------------------------------------SSEEEEEECCCBCCBHHHHHHHCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeec---CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++||+||||||+|||++ .++.+||+|||+|+...... ......+||+.|+|||++.+ ..
T Consensus 126 lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~Y~APE~l~~-~~ 189 (444)
T 3soa_A 126 CHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ---------------QAWFGFAGTPGYLSPEVLRK-DP 189 (444)
T ss_dssp HHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTC---------------CBCCCSCSCGGGCCHHHHTT-CC
T ss_pred HHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCC---------------ceeecccCCcccCCHHHhcC-CC
Confidence 9999999999999999998 45789999999997653211 11234689999999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
|+.++|||||||++|+|++ ||......+....+.......+ +.+...++++.+||.+||+.||.+|||+.++|+||
T Consensus 190 ~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~hp 269 (444)
T 3soa_A 190 YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKHP 269 (444)
T ss_dssp BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSC
T ss_pred CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcCc
Confidence 8999999999999999997 8877776666665555444443 45667889999999999999999999999999999
Q ss_pred CCCC
Q 001059 662 LPPQ 665 (1170)
Q Consensus 662 ~~~~ 665 (1170)
|+..
T Consensus 270 ~~~~ 273 (444)
T 3soa_A 270 WISH 273 (444)
T ss_dssp TTHH
T ss_pred cccC
Confidence 9864
|
| >1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-42 Score=387.67 Aligned_cols=257 Identities=25% Similarity=0.445 Sum_probs=208.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||+||+|++ .+|+.||||++............+.+|+.+++.++||||+++++++..
T Consensus 1 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 71 (288)
T 1ob3_A 1 MEKYHGLEKIGEGTYGVVYKAQN-NYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------- 71 (288)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEE-TTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC--------
T ss_pred CccchhhhhcccCCCEEEEEEEc-CCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEcc--------
Confidence 36899999999999999999999 589999999997654433345678899999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||++++|.+++... +.+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~ 119 (288)
T 1ob3_A 72 --------------------------------KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119 (288)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEecCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3468999999999999998764 6799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ...+...||+.|+|||++.+...++.++||
T Consensus 120 ~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 184 (288)
T 1ob3_A 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184 (288)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------------------CCCTTCCHHHHTTCCSCCTHHHH
T ss_pred CeecCCCCHHHEEEcCCCCEEEeECccccccCccc---------------cccccccccccccCchheeCCCCCCcHHHH
Confidence 99999999999999999999999999998653211 012345789999999999875668999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC--------------------------CccccCCHHHHHHHHHc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--------------------------PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p--------------------------~~~~~~~~e~~~LI~~~ 643 (1170)
|||||++|||++ ||......+....+....+..+ ......++++.+||++|
T Consensus 185 wslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 264 (288)
T 1ob3_A 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264 (288)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHH
Confidence 999999999997 7876655554444332211100 01124567899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 001059 644 MSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|+.||.+|||+.++++||||.+.
T Consensus 265 L~~dP~~Rpt~~e~l~hp~f~~~ 287 (288)
T 1ob3_A 265 LKLDPNQRITAKQALEHAYFKEN 287 (288)
T ss_dssp TCSSTTTSCCHHHHHTSGGGGC-
T ss_pred cCCCcccCCCHHHHhcCcchhhc
Confidence 99999999999999999999753
|
| >1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-42 Score=394.76 Aligned_cols=257 Identities=27% Similarity=0.441 Sum_probs=220.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||+|+++.... .....+.+.+|..+|+.++||||++++++|.+
T Consensus 4 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~------ 77 (318)
T 1fot_A 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD------ 77 (318)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC------
T ss_pred ChHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEe------
Confidence 35799999999999999999999999999999999975321 11234568899999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 78 ----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 123 (318)
T 1fot_A 78 ----------------------------------AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLH 123 (318)
T ss_dssp ----------------------------------SSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 599999998889999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++++||+|||+++.... .....+||+.|+|||++.+ ..++.++
T Consensus 124 ~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~------------------~~~~~~gt~~y~aPE~~~~-~~~~~~~ 184 (318)
T 1fot_A 124 SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD------------------VTYTLCGTPDYIAPEVVST-KPYNKSI 184 (318)
T ss_dssp TTTEECCCCCGGGEEECTTSCEEECCCSSCEECSS------------------CBCCCCSCTTTCCHHHHTT-CCBCTTH
T ss_pred HCCccccCCChheEEEcCCCCEEEeecCcceecCC------------------ccccccCCccccCHhHhcC-CCCCccc
Confidence 99999999999999999999999999999985421 1134589999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~ 662 (1170)
|||||||++|||++ ||...........+......+|+ ..++++.+||++||+.||.+|| +++++++|||
T Consensus 185 DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~ 261 (318)
T 1fot_A 185 DWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP---FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPW 261 (318)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred chhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhcCcc
Confidence 99999999999996 88777666666666555444443 4567999999999999999999 9999999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
|....++.+
T Consensus 262 f~~~~~~~~ 270 (318)
T 1fot_A 262 FKEVVWEKL 270 (318)
T ss_dssp GSSCCHHHH
T ss_pred ccCCCHHHH
Confidence 999887644
|
| >3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-42 Score=388.45 Aligned_cols=255 Identities=22% Similarity=0.374 Sum_probs=215.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++...... ..+.+.+|+.+++.++||||++++++|..
T Consensus 18 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------- 88 (297)
T 3fxz_A 18 PKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV------- 88 (297)
T ss_dssp GGGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hhhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeeccccc--HHHHHHHHHHHHhcCCCCCCCeEeEEEEE-------
Confidence 357899999999999999999999999999999999765433 34678899999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++... .+++..++.++.||+.||+|||+
T Consensus 89 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH~ 134 (297)
T 3fxz_A 89 ---------------------------------GDELWVVMEYLAGGSLTDVVTET-CMDEGQIAAVCRECLQALEFLHS 134 (297)
T ss_dssp ---------------------------------TTEEEEEEECCTTCBHHHHHHHS-CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEECCCCCCHHHHHhhc-CCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999995 6999988764 69999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++|
T Consensus 135 ~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 198 (297)
T 3fxz_A 135 NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVD 198 (297)
T ss_dssp TTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCGGGCCHHHHHC-SCBCTHHH
T ss_pred CCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcc---------------cccCCccCCcCccChhhhcC-CCCCcHHH
Confidence 999999999999999999999999999997653221 11234589999999999988 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||||++|||++ ||..........................++.+.+||.+||+.||.+|||+.++++|+|+...
T Consensus 199 iwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~ 276 (297)
T 3fxz_A 199 IWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIA 276 (297)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhhChhhccc
Confidence 9999999999997 88766655554444443333334455677899999999999999999999999999998764
|
| >3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-42 Score=412.36 Aligned_cols=280 Identities=28% Similarity=0.417 Sum_probs=203.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||+||+|+++.+|+.||||++...........++.+|+.+|+.++|||||+++++|....
T Consensus 51 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~----- 125 (458)
T 3rp9_A 51 IPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKD----- 125 (458)
T ss_dssp SCTTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC-----
T ss_pred cCCCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCC-----
Confidence 357899999999999999999999999999999999765555556678999999999999999999999874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
......+|+||||++++|.+++.....+++..++.++.||+.||+|||++
T Consensus 126 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~ 175 (458)
T 3rp9_A 126 ------------------------------VEKFDELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSA 175 (458)
T ss_dssp ------------------------------TTTCCCEEEEECCCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccCceEEEEEeccccchhhhcccCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 01235689999999999999999888899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCC-------------CCCCccccCcccccCccCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT-------------DTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
||+||||||+|||++.++++||+|||+|+........... .+. .........+..+||++|+|||+
T Consensus 176 ~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~ 254 (458)
T 3rp9_A 176 GILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQ-LPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPEL 254 (458)
T ss_dssp TCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCC-CC---------------------------CCCTTCCHHH
T ss_pred CcCCCCCChhhEEECCCCCEeecccccchhccCccccccc-cccCccccccccccccccccccccccCCcccccccChHH
Confidence 9999999999999999999999999999876432211000 000 00000113456789999999998
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc--------------CCCchh--------------------HHHHHHHHhhhcCC-
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH--------------PFSTAM--------------------ERQIVLSDLKQKGE- 624 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt--------------Pf~~~~--------------------~~~~~~~~l~~~~~- 624 (1170)
+.....|+.++||||||||||||++ +|.+.. .......+....+.
T Consensus 255 ~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p 334 (458)
T 3rp9_A 255 ILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTP 334 (458)
T ss_dssp HTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCC
T ss_pred hhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCC
Confidence 7654679999999999999999985 221111 01111111110000
Q ss_pred ---------------------------CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 625 ---------------------------LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 625 ---------------------------~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
+...+...++++.+||++||..||.+|||++++|+||||....+
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~ 405 (458)
T 3rp9_A 335 SEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI 405 (458)
T ss_dssp CHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred CHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence 11123455789999999999999999999999999999998753
|
| >3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-42 Score=404.68 Aligned_cols=276 Identities=24% Similarity=0.335 Sum_probs=208.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++++.||+|+||+||+|.++.+|+.||||++............+.+|+.+|+.+. ||||++++++|...
T Consensus 6 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~---- 81 (388)
T 3oz6_A 6 HVLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRAD---- 81 (388)
T ss_dssp HHHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECT----
T ss_pred cccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecC----
Confidence 4568999999999999999999999999999999999765555666778899999999997 99999999988432
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+...+|+|||||+++|..++.. ..+++..+..++.||+.||+|||
T Consensus 82 ----------------------------------~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH 126 (388)
T 3oz6_A 82 ----------------------------------NDRDVYLVFDYMETDLHAVIRA-NILEPVHKQYVVYQLIKVIKYLH 126 (388)
T ss_dssp ----------------------------------TSSCEEEEEECCSEEHHHHHHH-TCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCEEEEEecccCcCHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH
Confidence 2346899999999999998876 57999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCC-CC-----CCCCCccccCcccccCccCCCcccccCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA-FP-----TDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
++||+||||||+|||++.++.+||+|||+|+.+.......... .. ..........+..+||+.|+|||++.+..
T Consensus 127 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~ 206 (388)
T 3oz6_A 127 SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGST 206 (388)
T ss_dssp HTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCC
T ss_pred hCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCC
Confidence 9999999999999999999999999999998653211100000 00 00000112235568999999999998766
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC----------------------------------
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP---------------------------------- 627 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~---------------------------------- 627 (1170)
.|+.++|||||||++|||++ ||...........++...+..+.
T Consensus 207 ~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (388)
T 3oz6_A 207 KYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFT 286 (388)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHH
T ss_pred CCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCc
Confidence 79999999999999999997 78766555444433321111110
Q ss_pred ----------ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 628 ----------SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 628 ----------~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.....++++.+||++||+.||.+|||++++|+|||+...
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~~R~t~~e~l~Hp~~~~~ 335 (388)
T 3oz6_A 287 KWKNLLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIF 335 (388)
T ss_dssp HHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSTTTTTT
T ss_pred chhhhcccccccccCCHHHHHHHHHhhccCcccCCCHHHHhCCHHHHHh
Confidence 011557789999999999999999999999999998765
|
| >3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-42 Score=397.03 Aligned_cols=265 Identities=24% Similarity=0.421 Sum_probs=208.6
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
+....+++|++++.||+|+||+||+|++..+|+.||||+++...........+.+|+.+|+.++||||+++++++.+
T Consensus 28 ~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 104 (329)
T 3gbz_A 28 PSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH--- 104 (329)
T ss_dssp ----CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEE---
T ss_pred CcccchhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEec---
Confidence 34566789999999999999999999999999999999997665544455678899999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+++|.+++.....+++..++.++.||+.||+|
T Consensus 105 -------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~i~~ql~~~l~~ 147 (329)
T 3gbz_A 105 -------------------------------------NHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147 (329)
T ss_dssp -------------------------------------TTEEEEEEECCSEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEecCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 4578999999999999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeec-----CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 509 IHGQGIIHRDLTPNNIFFD-----ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~-----~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
||++||+||||||+|||++ .++.+||+|||+++...... ......+||+.|+|||++.+.
T Consensus 148 LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~ 212 (329)
T 3gbz_A 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPI---------------RQFTHEIITLWYRPPEILLGS 212 (329)
T ss_dssp HHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--------------------------CCTTCCHHHHTTC
T ss_pred HHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcc---------------cccCCCcCCccccCHHHhcCC
Confidence 9999999999999999994 44569999999998763221 112345789999999999875
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-cc--------------------------ccCC
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SW--------------------------VAKF 633 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~--------------------------~~~~ 633 (1170)
..++.++|||||||++|||++ ||...........+....+..+. .+ ...+
T Consensus 213 ~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (329)
T 3gbz_A 213 RHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLD 292 (329)
T ss_dssp CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSC
T ss_pred CCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccC
Confidence 668999999999999999996 78766665554444332221111 00 1156
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
+++.+||.+||+.||.+|||+.++|+||||.+..+
T Consensus 293 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~ 327 (329)
T 3gbz_A 293 DEGLDLLTAMLEMDPVKRISAKNALEHPYFSHNDF 327 (329)
T ss_dssp HHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSCS
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhCCcccCCCCC
Confidence 78899999999999999999999999999988654
|
| >2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-42 Score=399.38 Aligned_cols=259 Identities=25% Similarity=0.438 Sum_probs=222.0
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
...+.++|++.+.||+|+||.||+|.++.+|+.||+|+++.........+.+.+|+.+++.++||||++++++|.+
T Consensus 24 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~---- 99 (362)
T 2bdw_A 24 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE---- 99 (362)
T ss_dssp CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred CCCcccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----
Confidence 3455678999999999999999999999999999999998766666666789999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|
T Consensus 100 ------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~al~~ 143 (362)
T 2bdw_A 100 ------------------------------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAY 143 (362)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHTTCSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++||+||||||+|||++.+ +.+||+|||+++...... .....+||+.|+|||++.+ ..
T Consensus 144 lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~ 206 (362)
T 2bdw_A 144 CHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----------------AWHGFAGTPGYLSPEVLKK-DP 206 (362)
T ss_dssp HHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC----------------SCCCSCSCTTTCCHHHHTT-CC
T ss_pred HHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc----------------ccccCCCCccccCHHHHcc-CC
Confidence 999999999999999999865 459999999997653211 1234689999999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
|+.++|||||||++|+|++ ||...........+.......+ +.+...++++.+||.+||+.||.+|||+.++|+||
T Consensus 207 ~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp 286 (362)
T 2bdw_A 207 YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 286 (362)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTSH
T ss_pred CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcCc
Confidence 8999999999999999997 8877666655555554444443 45677889999999999999999999999999999
Q ss_pred CCCC
Q 001059 662 LPPQ 665 (1170)
Q Consensus 662 ~~~~ 665 (1170)
|+..
T Consensus 287 ~~~~ 290 (362)
T 2bdw_A 287 WICN 290 (362)
T ss_dssp HHHT
T ss_pred ccCC
Confidence 9864
|
| >4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-42 Score=402.30 Aligned_cols=262 Identities=23% Similarity=0.379 Sum_probs=215.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
..+++|+++++||+|+||+||+|+++.+|+.||||+++..... ......+.+|..+|+++ +||||++++++|..
T Consensus 49 ~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~---- 124 (396)
T 4dc2_A 49 LGLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT---- 124 (396)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred CChhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEE----
Confidence 4468999999999999999999999999999999999864322 22334678899999887 89999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|..++.....+++..++.++.||+.||+|
T Consensus 125 ------------------------------------~~~~~lV~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~ 168 (396)
T 4dc2_A 125 ------------------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168 (396)
T ss_dssp ------------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 169 LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------~~~~~~~gt~~Y~aPE~l~~-~~~~~ 232 (396)
T 4dc2_A 169 LHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGF 232 (396)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCBCGGGCCHHHHTT-CCBCT
T ss_pred HHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC---------------CccccccCCcccCCchhhcC-CCCCh
Confidence 999999999999999999999999999999997521110 11345689999999999998 57899
Q ss_pred cchhHHHHHHHHHhhc---CCCchh---------HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH--
Q 001059 589 KADMYSLGIVFFELWH---PFSTAM---------ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-- 654 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~---------~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-- 654 (1170)
++|||||||++|||++ ||.... .......+......+|. ..++++++||++||+.||.+||++
T Consensus 233 ~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~ 309 (396)
T 4dc2_A 233 SVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---SLSVKAASVLKSFLNKDPKERLGCHP 309 (396)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTSTTCST
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCCCC---cCCHHHHHHHHHHhcCCHhHcCCCCC
Confidence 9999999999999997 775321 11222233333333443 467799999999999999999984
Q ss_pred ----HHHHhccCCCCchHHHHH
Q 001059 655 ----TELLQDALPPQMEYELLD 672 (1170)
Q Consensus 655 ----~eiL~~~~~~~~~~~~~~ 672 (1170)
+++++||||....|+.+.
T Consensus 310 ~~~~~ei~~Hpff~~i~w~~l~ 331 (396)
T 4dc2_A 310 QTGFADIQGHPFFRNVDWDMME 331 (396)
T ss_dssp TTHHHHHHHSTTTTTCCHHHHH
T ss_pred CCCHHHHhcCccccCCCHHHHH
Confidence 899999999999887653
|
| >3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-42 Score=393.49 Aligned_cols=261 Identities=28% Similarity=0.478 Sum_probs=215.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+.++|++++.||+|+||+||+|+++.+|+.||||++...... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------ 76 (323)
T 3tki_A 4 PFVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRRE------ 76 (323)
T ss_dssp TTTTCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred cHhhhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEccccc-chHHHHHHHHHHHHhCCCCCCCeEEEEEec------
Confidence 3678999999999999999999999999999999999754332 234568899999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|+|||||++ +|.+++.....+++..++.++.||+.||+|||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH 122 (323)
T 3tki_A 77 ----------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122 (323)
T ss_dssp ----------------------------------SSEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4578999999975 99999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++.+...... ......+||+.|+|||++.+...++.++
T Consensus 123 ~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~-------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 189 (323)
T 3tki_A 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------RLLNKMCGTLPYVAPELLKRREFHAEPV 189 (323)
T ss_dssp HTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-------------CCBCSCCSCGGGSCHHHHHCSSBCHHHH
T ss_pred HCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc-------------cccCCCccCcCccCcHHhccCCCCCCcc
Confidence 999999999999999999999999999999865322110 1123468999999999998754457899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||++|+|++ ||....................+.+...++++.+||++||+.||.+|||+.++++|+||.+.
T Consensus 190 DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~ 268 (323)
T 3tki_A 190 DVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 268 (323)
T ss_dssp HHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred cHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhChhhccc
Confidence 99999999999997 88655443333333333444455567788899999999999999999999999999999764
|
| >1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-42 Score=397.13 Aligned_cols=257 Identities=26% Similarity=0.402 Sum_probs=221.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+|+.++||||++++++|.+
T Consensus 39 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~------ 112 (350)
T 1rdq_E 39 QLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD------ 112 (350)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC------
T ss_pred CHHHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc------
Confidence 36899999999999999999999999999999999975321 11234678899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||
T Consensus 113 ----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 158 (350)
T 1rdq_E 113 ----------------------------------NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLH 158 (350)
T ss_dssp ----------------------------------SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 457899999996 699999998889999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++++||+|||+++..... ....+||+.|+|||++.+ ..++.++
T Consensus 159 ~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~ 219 (350)
T 1rdq_E 159 SLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------TWTLCGTPEALAPEIILS-KGYNKAV 219 (350)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC------------------BCCCEECGGGCCHHHHTT-CCBCTHH
T ss_pred HCCcccccCccceEEECCCCCEEEcccccceeccCC------------------cccccCCccccCHHHhcC-CCCCCcC
Confidence 999999999999999999999999999999864211 134589999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~ 662 (1170)
|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||+ ++++++|+|
T Consensus 220 DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~ 296 (350)
T 1rdq_E 220 DWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPS---HFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKW 296 (350)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGG
T ss_pred CEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHhCcC
Confidence 99999999999996 88877666666555554444443 45779999999999999999998 999999999
Q ss_pred CCCchHHHH
Q 001059 663 PPQMEYELL 671 (1170)
Q Consensus 663 ~~~~~~~~~ 671 (1170)
|....+..+
T Consensus 297 f~~~~w~~~ 305 (350)
T 1rdq_E 297 FATTDWIAI 305 (350)
T ss_dssp GTTCCHHHH
T ss_pred cCCCCHHHH
Confidence 999887644
|
| >2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-41 Score=389.24 Aligned_cols=260 Identities=26% Similarity=0.390 Sum_probs=219.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
...+.|++.+.||+|+||.||+|+++.+|+.||||+++...... ...+.+.+|+.+|+.++||||++++++|..
T Consensus 8 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 85 (326)
T 2y0a_A 8 NVDDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN-- 85 (326)
T ss_dssp CHHHHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred CcccceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEe--
Confidence 34567999999999999999999999999999999997654321 135678999999999999999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||
T Consensus 86 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al 127 (326)
T 2y0a_A 86 --------------------------------------KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGV 127 (326)
T ss_dssp --------------------------------------SSEEEEEEECCCSCBHHHHHTTSSCCBHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHH
Confidence 456899999996 59999998888899999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCC----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+|||++||+||||||+|||++.++ .+||+|||+++...... .....+||+.|+|||++.+
T Consensus 128 ~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 191 (326)
T 2y0a_A 128 YYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----------------EFKNIFGTPEFVAPEIVNY 191 (326)
T ss_dssp HHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTS----------------CCCCCCSCTTTCCHHHHTT
T ss_pred HHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCC----------------ccccccCCcCcCCceeecC
Confidence 999999999999999999999887 89999999998653211 1234579999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||||||++|+|++ ||......+............+. .+...++.+.+||++||+.||.+|||+.++|
T Consensus 192 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l 270 (326)
T 2y0a_A 192 -EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270 (326)
T ss_dssp -CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHH
T ss_pred -CCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHh
Confidence 568999999999999999997 88766655555444443444433 3456778999999999999999999999999
Q ss_pred hccCCCCchH
Q 001059 659 QDALPPQMEY 668 (1170)
Q Consensus 659 ~~~~~~~~~~ 668 (1170)
+|||+.....
T Consensus 271 ~hp~~~~~~~ 280 (326)
T 2y0a_A 271 QHPWIKPKDT 280 (326)
T ss_dssp HSTTTSCCSH
T ss_pred cCCCccCCcc
Confidence 9999988764
|
| >3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-41 Score=392.07 Aligned_cols=260 Identities=23% Similarity=0.385 Sum_probs=215.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+++++ +||||++++++|..
T Consensus 7 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~----- 81 (345)
T 3a8x_A 7 GLQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQT----- 81 (345)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-----
T ss_pred chhheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEe-----
Confidence 35799999999999999999999999999999999986543 334456788999999988 89999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+||
T Consensus 82 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~L 126 (345)
T 3a8x_A 82 -----------------------------------ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 126 (345)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999998888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 127 H~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 190 (345)
T 3a8x_A 127 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---------------DTTSTFCGTPNYIAPEILRG-EDYGFS 190 (345)
T ss_dssp HHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCTH
T ss_pred HHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC---------------CcccccCCCccccCccccCC-CCCChH
Confidence 99999999999999999999999999999997532110 11245689999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCCch---------hHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH---
Q 001059 590 ADMYSLGIVFFELWH---PFSTA---------MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA--- 654 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~---------~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta--- 654 (1170)
+|||||||++|||++ ||... ........+......+|. ..++++.+||++||+.||.+||++
T Consensus 191 ~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~ 267 (345)
T 3a8x_A 191 VDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR---SLSVKAASVLKSFLNKDPKERLGCHPQ 267 (345)
T ss_dssp HHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCCTT
T ss_pred HhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhcCCHhHCCCCCCc
Confidence 999999999999997 77531 111222223332333333 467799999999999999999995
Q ss_pred ---HHHHhccCCCCchHHHH
Q 001059 655 ---TELLQDALPPQMEYELL 671 (1170)
Q Consensus 655 ---~eiL~~~~~~~~~~~~~ 671 (1170)
.++++||||....|+.+
T Consensus 268 ~~~~~i~~hp~f~~~~w~~~ 287 (345)
T 3a8x_A 268 TGFADIQGHPFFRNVDWDMM 287 (345)
T ss_dssp THHHHHHTSGGGTTCCHHHH
T ss_pred CCHHHHhcCCccCCCCHHHH
Confidence 89999999999987654
|
| >3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-41 Score=383.52 Aligned_cols=263 Identities=27% Similarity=0.386 Sum_probs=209.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---hhhHHHHHHHHHHHHhcc---CCCceeEEEEEeec
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---LPVNDRILREVATLSRLQ---HQHVVRYYQAWFET 426 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---~~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~e~ 426 (1170)
..++|++++.||+|+||+||+|+++.+|+.||||++...... ......+.+|+.+++.++ ||||++++++|...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457999999999999999999999999999999999754321 122346777888877775 99999999988542
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCC--CCHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVE 504 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~--l~e~~~~~i~~qI~~ 504 (1170)
. ......++++|||++++|.+++..... +++..++.++.||+.
T Consensus 87 ~-----------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~ 131 (308)
T 3g33_A 87 R-----------------------------------TDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLR 131 (308)
T ss_dssp C-----------------------------------SSSEEEEEEEEECCCCBHHHHHHTCCTTCSCHHHHHHHHHHHHH
T ss_pred C-----------------------------------CCCceeEEEEehhhhcCHHHHHhhccCCCCCHHHHHHHHHHHHH
Confidence 1 012346899999999999999987654 999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||+|||++||+||||||+|||++.++.+||+|||+++...... ..+..+||+.|+|||++.+ .
T Consensus 132 al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~ 194 (308)
T 3g33_A 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM----------------ALTPVVVTLWYRAPEVLLQ-S 194 (308)
T ss_dssp HHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCC----------------CSGGGGCCCSSCCHHHHHT-S
T ss_pred HHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCc----------------ccCCccccccccCchHHcC-C
Confidence 9999999999999999999999999999999999998643211 1244689999999999987 5
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC------------------------ccccCCHHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP------------------------SWVAKFSEQE 637 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~------------------------~~~~~~~e~~ 637 (1170)
.++.++|||||||++|+|++ ||...........+....+..+. .....++++.
T Consensus 195 ~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (308)
T 3g33_A 195 TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGA 274 (308)
T ss_dssp CCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHH
T ss_pred CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHH
Confidence 68999999999999999997 88776665555444332221111 1124567899
Q ss_pred HHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 638 SLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 638 ~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||.+||+.||.+|||+.++|+|+|+.+..
T Consensus 275 ~li~~~L~~dP~~R~t~~e~l~h~~~~~~~ 304 (308)
T 3g33_A 275 QLLLEMLTFNPHKRISAFRALQHSYLHKDE 304 (308)
T ss_dssp HHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred HHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence 999999999999999999999999998754
|
| >1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-42 Score=397.21 Aligned_cols=261 Identities=28% Similarity=0.397 Sum_probs=219.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
...++|++.+.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|..
T Consensus 14 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~---- 89 (345)
T 1xjd_A 14 LKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT---- 89 (345)
T ss_dssp --CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEe----
Confidence 346899999999999999999999999999999999975321 112345678899999887 99999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|
T Consensus 90 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 133 (345)
T 1xjd_A 90 ------------------------------------KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQF 133 (345)
T ss_dssp ------------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..++.
T Consensus 134 LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~ 197 (345)
T 1xjd_A 134 LHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---------------AKTNTFCGTPDYIAPEILLG-QKYNH 197 (345)
T ss_dssp HHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCT
T ss_pred HHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCC---------------CcccCCCCCcccCChhhhcC-CCCCC
Confidence 999999999999999999999999999999997532110 11245689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH-HHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~-eiL~~~~~~ 664 (1170)
++|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+||++. ++++||||.
T Consensus 198 ~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~ 274 (345)
T 1xjd_A 198 SVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPR---WLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFR 274 (345)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGT
T ss_pred hhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCCc---ccCHHHHHHHHHHhcCCHhHcCCChHHHHcCcccc
Confidence 9999999999999996 88777666665555544444443 4567999999999999999999998 999999999
Q ss_pred CchHHHH
Q 001059 665 QMEYELL 671 (1170)
Q Consensus 665 ~~~~~~~ 671 (1170)
...|+.+
T Consensus 275 ~~~w~~l 281 (345)
T 1xjd_A 275 EINWEEL 281 (345)
T ss_dssp TCCHHHH
T ss_pred CCCHHHH
Confidence 9987654
|
| >3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.8e-42 Score=410.59 Aligned_cols=261 Identities=28% Similarity=0.390 Sum_probs=209.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||+||+|++..+|+.||||++...........++.+|+.+|+.++||||++++++|....
T Consensus 60 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~----- 134 (464)
T 3ttj_A 60 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK----- 134 (464)
T ss_dssp EETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCC-----
T ss_pred ecCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCC-----
Confidence 468999999999999999999999999999999999865545556678999999999999999999999884321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+|||||+++|.+.+.. .+++..++.++.||+.||+|||++
T Consensus 135 -----------------------------~~~~~~~~~lv~E~~~~~l~~~~~~--~l~~~~~~~~~~qil~aL~~lH~~ 183 (464)
T 3ttj_A 135 -----------------------------TLEEFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHSA 183 (464)
T ss_dssp -----------------------------STTTCCEEEEEEECCSEEHHHHHTS--CCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccCCeEEEEEeCCCCCHHHHHhh--cCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0123457899999999988887754 499999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+|+..... ...+..+||+.|+|||++.+ ..|+.++||
T Consensus 184 ~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~----------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 246 (464)
T 3ttj_A 184 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS----------------FMMTPYVVTRYYRAPEVILG-MGYKENVDI 246 (464)
T ss_dssp TCCCCCCCGGGEEECTTSCEEECCCCCC-----C----------------CCC----CCCTTCCHHHHTT-CCCCTTHHH
T ss_pred CcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC----------------cccCCCcccccccCHHHHcC-CCCCHHHHH
Confidence 9999999999999999999999999999865321 11345689999999999998 579999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCc---------------------------ccc-----------
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS---------------------------WVA----------- 631 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~---------------------------~~~----------- 631 (1170)
|||||++|||++ ||.+....+....++...+..++. +..
T Consensus 247 wSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (464)
T 3ttj_A 247 WSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNK 326 (464)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCccccccccccccc
Confidence 999999999996 887665555444443322221110 000
Q ss_pred -CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 632 -KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 632 -~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.++++.+||++||..||.+|||++++|+||||...
T Consensus 327 ~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~~~~~ 362 (464)
T 3ttj_A 327 LKASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 362 (464)
T ss_dssp HHHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred ccCHHHHHHHHHHcCCChhhCCCHHHHhcChhhhhc
Confidence 14578999999999999999999999999999854
|
| >4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-41 Score=398.41 Aligned_cols=261 Identities=25% Similarity=0.420 Sum_probs=216.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++++.||+|+||+||+|+++.+|+.||+|++..... .......+.+|+.+|+.++|||||+++++|..
T Consensus 12 v~~~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~----- 86 (384)
T 4fr4_A 12 VNFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQD----- 86 (384)
T ss_dssp CCGGGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred CChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe-----
Confidence 346899999999999999999999999999999999975321 12234678899999999999999999988832
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||. |+|.+++.....+++..++.++.||+.||+||
T Consensus 87 -----------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~L 131 (384)
T 4fr4_A 87 -----------------------------------EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYL 131 (384)
T ss_dssp -----------------------------------SSEEEEEECCCTTEEHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999999888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKID 587 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~ 587 (1170)
|++||+||||||+|||++.++++||+|||+|+.+.... .....+||+.|+|||++.+. ..|+
T Consensus 132 H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~Y~aPE~~~~~~~~~~~ 195 (384)
T 4fr4_A 132 QNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET----------------QITTMAGTKPYMAPEMFSSRKGAGYS 195 (384)
T ss_dssp HHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCGGGTCCCSSCCBC
T ss_pred HHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC----------------ceeccCCCccccCCeeeccCCCCCCC
Confidence 99999999999999999999999999999998653211 12456899999999998742 3489
Q ss_pred ccchhHHHHHHHHHhhc---CCCch---hHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-HHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTA---MERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-ATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~---~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-a~eiL~~ 660 (1170)
.++|||||||++|||++ ||... ...+............| ...++++.+||++||+.||.+||+ ++++++|
T Consensus 196 ~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~h 272 (384)
T 4fr4_A 196 FAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP---SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNF 272 (384)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTS
T ss_pred ccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC---CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcC
Confidence 99999999999999997 77532 22222222222223333 345679999999999999999998 9999999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
|||....|+.+
T Consensus 273 p~f~~~~w~~~ 283 (384)
T 4fr4_A 273 PYMNDINWDAV 283 (384)
T ss_dssp GGGTTCCHHHH
T ss_pred hhhhcCCHHHH
Confidence 99999987654
|
| >2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-41 Score=389.11 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=199.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|.++.+|+.||||+++.... ......+.+|+.+|+.++||||+++++++.
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 73 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIH--------- 73 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCST-TCSCHHHHHHHHHHTTCCBTTBCCEEEEEC---------
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccc-cccHHHHHHHHHHHHhcCCCCcceEEEEEE---------
Confidence 4689999999999999999999999999999999975432 223467889999999999999999999873
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc------CCCCHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY------DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~------~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+|||||+++|.+++... ..+++..++.++.||+.||+
T Consensus 74 -------------------------------~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~ 122 (317)
T 2pmi_A 74 -------------------------------TENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122 (317)
T ss_dssp -------------------------------CTTEEEEEEECCCCBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------ECCeEEEEEEecCCCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHH
Confidence 24578999999999999988654 35899999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++
T Consensus 123 ~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~ 187 (317)
T 2pmi_A 123 FCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPV---------------NTFSSEVVTLWYRAPDVLMGSRTYS 187 (317)
T ss_dssp HHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCC---------------CCCCCCCSCCTTCCHHHHTTCCCCC
T ss_pred HHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCc---------------ccCCCCcccccccCchHhhCCCCCC
Confidence 9999999999999999999999999999999998653211 0123457999999999998755689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-------------------------------CccccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-------------------------------PSWVAKF 633 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-------------------------------~~~~~~~ 633 (1170)
.++|||||||++|||++ ||......+....+....+..+ ......+
T Consensus 188 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (317)
T 2pmi_A 188 TSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLD 267 (317)
T ss_dssp THHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCC
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccccccCC
Confidence 99999999999999997 7876655544433332111110 0011356
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
+++.+||.+||+.||.+|||+.++|+||||.+...
T Consensus 268 ~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~ 302 (317)
T 2pmi_A 268 GNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYH 302 (317)
T ss_dssp HHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC
T ss_pred HHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccc
Confidence 78999999999999999999999999999987653
|
| >1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-42 Score=391.50 Aligned_cols=255 Identities=22% Similarity=0.337 Sum_probs=217.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|.++.+|+.||+|++... ......+.+|+.+|+.++||||++++++|.+
T Consensus 3 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~---~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------- 72 (321)
T 1tki_A 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVK---GTDQVLVKKEISILNIARHRNILHLHESFES------- 72 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC---THHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------
T ss_pred hhhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecC---cccHHHHHHHHHHHHhCCCCCCCeEeEEEec-------
Confidence 457999999999999999999999999999999998743 2345678899999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 73 ---------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH 119 (321)
T 1tki_A 73 ---------------------------------MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119 (321)
T ss_dssp ---------------------------------TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEeCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357899999997 59999997654 6999999999999999999999
Q ss_pred hCCccccCCCCCceeecC--CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 511 GQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
++||+||||||+|||++. ++.+||+|||+++...... ......||+.|+|||++.+ ..++.
T Consensus 120 ~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~ 182 (321)
T 1tki_A 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----------------NFRLLFTAPEYYAPEVHQH-DVVST 182 (321)
T ss_dssp HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------EEEEEESCGGGSCHHHHTT-CEECH
T ss_pred HCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCC----------------ccccccCChhhcCcHHhcC-CCCCc
Confidence 999999999999999987 7899999999998653211 1134579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
++|||||||++|+|++ ||......+....+......++. .+...++++.+||.+||..||.+|||+.++|+|||+.
T Consensus 183 ~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~ 262 (321)
T 1tki_A 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262 (321)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred hhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcChhhc
Confidence 9999999999999996 88777766666555554444443 4557788999999999999999999999999999987
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
+..
T Consensus 263 ~~~ 265 (321)
T 1tki_A 263 QKI 265 (321)
T ss_dssp SCG
T ss_pred cCc
Confidence 653
|
| >2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-41 Score=394.96 Aligned_cols=260 Identities=26% Similarity=0.381 Sum_probs=220.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|+.+ +||||++++++|.
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~------ 91 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ------ 91 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEE------
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEE------
Confidence 46899999999999999999999999999999999975321 112345688999999988 8999999998873
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|+|||||+ |+|.+++...+.+++..++.++.||+.||+||
T Consensus 92 ----------------------------------~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~L 137 (353)
T 2i0e_A 92 ----------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFFL 137 (353)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cCCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 2457899999996 59999999888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++++||+|||+|+...... ......+||+.|+|||++.+ ..++.+
T Consensus 138 H~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 201 (353)
T 2i0e_A 138 QSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGKS 201 (353)
T ss_dssp HHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBSTH
T ss_pred HHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC---------------cccccccCCccccChhhhcC-CCcCCc
Confidence 99999999999999999999999999999997532110 11245689999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhcc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 661 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~ 661 (1170)
+|||||||++|||++ ||......+....+......+|. ..++++.+||++||+.||.+|| ++.++++||
T Consensus 202 ~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~ 278 (353)
T 2i0e_A 202 VDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHA 278 (353)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSG
T ss_pred ccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCc
Confidence 999999999999996 88877766666666655544543 4677999999999999999999 479999999
Q ss_pred CCCCchHHHH
Q 001059 662 LPPQMEYELL 671 (1170)
Q Consensus 662 ~~~~~~~~~~ 671 (1170)
||....|+.+
T Consensus 279 ~f~~~~w~~l 288 (353)
T 2i0e_A 279 FFRYIDWEKL 288 (353)
T ss_dssp GGTTCCHHHH
T ss_pred cccCCCHHHH
Confidence 9999987654
|
| >4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=383.09 Aligned_cols=259 Identities=24% Similarity=0.409 Sum_probs=209.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||+||+|++..+|+.||||++............+.+|+.++++++||||++++++|..
T Consensus 2 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 73 (311)
T 4agu_A 2 MEKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRR-------- 73 (311)
T ss_dssp -CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred cccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeec--------
Confidence 578999999999999999999999999999999997665555556778899999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||++ +|..++.....+++..++.++.||+.||+|||++
T Consensus 74 --------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~i~~~l~~~l~~lH~~ 121 (311)
T 4agu_A 74 --------------------------------KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKH 121 (311)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEEeCCCchHHHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 3568999999986 6777777777899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++||
T Consensus 122 ~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di 186 (311)
T 4agu_A 122 NCIHRDVKPENILITKHSVIKLCDFGFARLLTGPS---------------DYYDDEVATRWYRSPELLVGDTQYGPPVDV 186 (311)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECC---------------------------GGGCCHHHHHTCSCCCTHHHH
T ss_pred CCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcc---------------cccCCCcCCccccChHHHhcCCCCCcchhh
Confidence 99999999999999999999999999998653221 012345799999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-------------------CC---------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-------------------LP---------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-------------------~p---------~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||................+. .+ ..+...++++.+||+
T Consensus 187 ~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 266 (311)
T 4agu_A 187 WAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLK 266 (311)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHH
Confidence 999999999997 77665544433222211111 11 012356778999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||++++++||||.+..
T Consensus 267 ~~L~~dP~~Rpt~~ell~hp~f~~~~ 292 (311)
T 4agu_A 267 GCLHMDPTERLTCEQLLHHPYFENIR 292 (311)
T ss_dssp HHCCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHccCChhhcCCHHHHhcChHHHhcc
Confidence 99999999999999999999999875
|
| >3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-42 Score=399.85 Aligned_cols=257 Identities=24% Similarity=0.359 Sum_probs=210.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.+++|++.+.||+|+||+||+|++..+|+.||||++..... .......+.+|+.+|+.++||||+++++++..
T Consensus 5 ~~~i~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~---- 80 (336)
T 3h4j_B 5 KRHIGPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITT---- 80 (336)
T ss_dssp CSEETTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEe----
Confidence 3457899999999999999999999999999999999974321 11123578899999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+||||++|+|.+.+.....+++..++.++.||+.||+||
T Consensus 81 ------------------------------------~~~~~lv~E~~~g~l~~~l~~~~~l~~~~~~~i~~qi~~aL~~L 124 (336)
T 3h4j_B 81 ------------------------------------PTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYC 124 (336)
T ss_dssp ------------------------------------SSEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEECCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999998888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||++....... .....+||+.|+|||++.+...++.+
T Consensus 125 H~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 188 (336)
T 3h4j_B 125 HRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----------------FLKTSCGSPNYAAPEVINGKLYAGPE 188 (336)
T ss_dssp HHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB----------------TTCCCTTSTTTSCGGGSCCSGGGCHH
T ss_pred HHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc----------------ccccccCCcCcCCHHHHcCCCCCCCc
Confidence 99999999999999999999999999999998653221 12345899999999999885444789
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|||||||++|+|++ ||.............. .........++++.+||++||+.||.+|||+.++++||||...
T Consensus 189 ~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~---~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~ 265 (336)
T 3h4j_B 189 VDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNS---CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN 265 (336)
T ss_dssp HHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCS---SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred cchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHc---CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence 999999999999997 7765432221111111 1112223457899999999999999999999999999998653
|
| >3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-41 Score=384.54 Aligned_cols=255 Identities=36% Similarity=0.539 Sum_probs=208.0
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
.+...+.++|+++++||+|+||+||+|+++.+|+.||||++..............+|+..+..+ +||||++++++|.+
T Consensus 50 ~~~~~~~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~- 128 (311)
T 3p1a_A 50 RPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEE- 128 (311)
T ss_dssp SSSCHHHHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-
T ss_pred CccchhhhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEe-
Confidence 3445566889999999999999999999999999999999876555555555667777777666 99999999998843
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+++|.+++...+ .+++..++.++.||+.|
T Consensus 129 ---------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~l~~~~~~~i~~qi~~a 169 (311)
T 3p1a_A 129 ---------------------------------------GGILYLQTELCGPSLQQHCEAWGASLPEAQVWGYLRDTLLA 169 (311)
T ss_dssp ---------------------------------------TTEEEEEEECCCCBHHHHHHHHCSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEeccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 45789999999999999887644 59999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ .
T Consensus 170 L~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~--~ 231 (311)
T 3p1a_A 170 LAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAG----------------AGEVQEGDPRYMAPELLQG--S 231 (311)
T ss_dssp HHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC----------------------CCCCCGGGCCGGGGGT--C
T ss_pred HHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCC----------------CCcccCCCccccCHhHhcC--C
Confidence 999999999999999999999999999999999987643211 1234579999999999986 5
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++.++|||||||++|||++ ||....... .+. ....+ ......++++.+||.+||+.||.+|||+.++|+||
T Consensus 232 ~~~~~DiwslG~il~el~~g~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp 306 (311)
T 3p1a_A 232 YGTAADVFSLGLTILEVACNMELPHGGEGWQ----QLR-QGYLPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALP 306 (311)
T ss_dssp CSTHHHHHHHHHHHHHHHHTCCCCSSHHHHH----HHT-TTCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSG
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCCCccHHH----HHh-ccCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHHhCc
Confidence 8999999999999999997 333332221 122 22223 23445678999999999999999999999999999
Q ss_pred CCCC
Q 001059 662 LPPQ 665 (1170)
Q Consensus 662 ~~~~ 665 (1170)
|+++
T Consensus 307 ~~~~ 310 (311)
T 3p1a_A 307 VLRQ 310 (311)
T ss_dssp GGSC
T ss_pred cccC
Confidence 9975
|
| >3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=412.68 Aligned_cols=261 Identities=29% Similarity=0.509 Sum_probs=220.6
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
...+.+.++|++++.||+|+||+||+|+++.+|+.||||++............+.+|+.+|++++||||+++++++..
T Consensus 15 ~~~g~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 92 (486)
T 3mwu_A 15 YFQGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED-- 92 (486)
T ss_dssp TTCCHHHHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred cccCChhcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEc--
Confidence 345677899999999999999999999999999999999997543223345678999999999999999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||. ++|.+.+.....+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~al 134 (486)
T 3mwu_A 93 --------------------------------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGI 134 (486)
T ss_dssp --------------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 457899999996 59999998888999999999999999999
Q ss_pred HHHHhCCccccCCCCCceeec---CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
+|||++||+||||||+|||++ .++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 135 ~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~- 197 (486)
T 3mwu_A 135 TYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----------------KMKDRIGTAYYIAPEVLRG- 197 (486)
T ss_dssp HHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC--------------------CCTTGGGGCCGGGGGS-
T ss_pred HHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC----------------ccCCCcCCCCCCCHHHhCC-
Confidence 999999999999999999995 45679999999998653211 1234579999999999987
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.|+.++|||||||++|+|++ ||......+....+....... .+.+...++++++||++||+.||.+|||+.++|+
T Consensus 198 -~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~ 276 (486)
T 3mwu_A 198 -TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (486)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred -CCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 48999999999999999997 887777666665555444433 3466788899999999999999999999999999
Q ss_pred ccCCCCc
Q 001059 660 DALPPQM 666 (1170)
Q Consensus 660 ~~~~~~~ 666 (1170)
|||+.+.
T Consensus 277 hp~~~~~ 283 (486)
T 3mwu_A 277 HPWIQKY 283 (486)
T ss_dssp CHHHHHT
T ss_pred CHhhccC
Confidence 9997643
|
| >1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-41 Score=394.81 Aligned_cols=262 Identities=26% Similarity=0.409 Sum_probs=210.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||.||+|.+..+|+.||||++...........++.+|+.+|+.++||||+++++++.....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~---- 98 (367)
T 1cm8_A 23 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET---- 98 (367)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS----
T ss_pred ecceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCc----
Confidence 3578999999999999999999999999999999997655555566789999999999999999999998743210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
......+|+||||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 99 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~~~~qi~~~L~~LH~~ 147 (367)
T 1cm8_A 99 ------------------------------LDDFTDFYLVMPFMGTDLGKLMKH-EKLGEDRIQFLVYQMLKGLRYIHAA 147 (367)
T ss_dssp ------------------------------TTTCCCCEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccCceEEEEEecCCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 012245799999998899998876 5799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++.... ..+..+||+.|+|||++.+...++.++||
T Consensus 148 ~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 209 (367)
T 1cm8_A 148 GIIHRDLKPGNLAVNEDCELKILDFGLARQADS------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDI 209 (367)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCS------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHH
T ss_pred CccccCcCHHHEEEcCCCCEEEEeeeccccccc------------------ccCcCcCCCCcCCHHHHhCCCCCChhhhH
Confidence 999999999999999999999999999986421 12446899999999999875679999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~ 641 (1170)
|||||++|||++ ||...........+....+..+ ..+...++++.+||.
T Consensus 210 wslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 289 (367)
T 1cm8_A 210 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE 289 (367)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHH
Confidence 999999999997 7876555444433332222111 122345789999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++|+||||....
T Consensus 290 ~mL~~dP~~R~t~~e~l~hp~f~~~~ 315 (367)
T 1cm8_A 290 KMLVLDAEQRVTAGEALAHPYFESLH 315 (367)
T ss_dssp HHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHccCChhHCCCHHHHhcChHHHhhc
Confidence 99999999999999999999998764
|
| >3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-41 Score=375.00 Aligned_cols=260 Identities=25% Similarity=0.437 Sum_probs=221.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+.+.++|++.+.||+|+||.||+|.++.+|+.||+|++..........+.+.+|+.++++++||||+++++++.+
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 76 (284)
T 3kk8_A 2 TKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQE----- 76 (284)
T ss_dssp CTTTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred chhhhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEc-----
Confidence 345689999999999999999999999999999999998766666667789999999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++||||+ ++|.+.+.....+++..++.++.||+.||+||
T Consensus 77 -----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~l 121 (284)
T 3kk8_A 77 -----------------------------------ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 121 (284)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 456799999997 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
|++||+||||||+|||++.++. +||+|||++....... ......||+.|+|||++.+ ..+
T Consensus 122 H~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~ 184 (284)
T 3kk8_A 122 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE----------------AWHGFAGTPGYLSPEVLKK-DPY 184 (284)
T ss_dssp HHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSC----------------BCCCSCSCGGGCCHHHHTT-CCB
T ss_pred HHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCc----------------cccCCCCCcCCcCchhhcC-CCC
Confidence 9999999999999999987655 9999999997543211 1234579999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++||||||+++|+|++ ||...................+ +.+...++++.+||.+||+.||.+|||+.++++|||
T Consensus 185 ~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (284)
T 3kk8_A 185 SKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPW 264 (284)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTSHH
T ss_pred CcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcCcc
Confidence 999999999999999997 8877666555555444443333 344567889999999999999999999999999998
Q ss_pred CCCch
Q 001059 663 PPQME 667 (1170)
Q Consensus 663 ~~~~~ 667 (1170)
+.+..
T Consensus 265 ~~~~~ 269 (284)
T 3kk8_A 265 ICNRE 269 (284)
T ss_dssp HHSCC
T ss_pred ccCCh
Confidence 86653
|
| >2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=394.18 Aligned_cols=262 Identities=26% Similarity=0.374 Sum_probs=213.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHH-HHhccCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVAT-LSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~i-L~~l~HpnIV~l~~~~~e~~~ 428 (1170)
....++|++++.||+|+||+||+|+++.+++.||||+++..... ......+.+|..+ ++.++||||++++++|..
T Consensus 34 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~--- 110 (373)
T 2r5t_A 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQT--- 110 (373)
T ss_dssp TCCGGGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEEC---
T ss_pred CCChhheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEe---
Confidence 34568999999999999999999999999999999999765422 2234456777776 577899999999988732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+
T Consensus 111 -------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~ 153 (373)
T 2r5t_A 111 -------------------------------------ADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALG 153 (373)
T ss_dssp -------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 457899999997 599999998889999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++++||+|||+++...... ......+||+.|+|||++.+ ..|+
T Consensus 154 ~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~ 217 (373)
T 2r5t_A 154 YLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---------------STTSTFCGTPEYLAPEVLHK-QPYD 217 (373)
T ss_dssp HHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC---------------CCCCSBSCCCCCCCHHHHTT-CCCC
T ss_pred HHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC---------------CccccccCCccccCHHHhCC-CCCC
Confidence 9999999999999999999999999999999998532111 11245689999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH----HHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA----TELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta----~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....++.....+++ ..++++++||++||+.||.+||++ .++++|
T Consensus 218 ~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h 294 (373)
T 2r5t_A 218 RTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKP---NITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSH 294 (373)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCCS---SSCHHHHHHHHHHTCSSGGGSTTTTTTHHHHHTS
T ss_pred chhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCCC---CCCHHHHHHHHHHcccCHHhCCCCCCCHHHHhCC
Confidence 99999999999999996 88877766666666654444443 456799999999999999999986 699999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
+||....|+.+
T Consensus 295 ~~f~~~~w~~l 305 (373)
T 2r5t_A 295 VFFSLINWDDL 305 (373)
T ss_dssp GGGTTCCHHHH
T ss_pred ccccCCCHHHH
Confidence 99999987654
|
| >4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-41 Score=406.45 Aligned_cols=264 Identities=23% Similarity=0.384 Sum_probs=221.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|+++++||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+++.++||||++++++|.+
T Consensus 73 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~------- 145 (437)
T 4aw2_A 73 REDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQD------- 145 (437)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEEC-------
T ss_pred hhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee-------
Confidence 4789999999999999999999999999999999974211 01112347889999999999999999998832
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 146 ---------------------------------~~~~~lV~Ey~~gg~L~~~l~~~~~~l~e~~~~~~~~qi~~aL~~LH 192 (437)
T 4aw2_A 146 ---------------------------------DNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192 (437)
T ss_dssp ---------------------------------SSEEEEEECCCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEecCCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999995 699999987 467999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc----CCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ----GWPKI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~~~~~ 586 (1170)
++||+||||||+|||++.++++||+|||+|+...... ....+..+||+.|+|||++. +...|
T Consensus 193 ~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~--------------~~~~~~~~GT~~Y~APE~l~~~~~~~~~~ 258 (437)
T 4aw2_A 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG--------------TVQSSVAVGTPDYISPEILQAMEGGKGRY 258 (437)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------CEECCSCCSCGGGCCHHHHHHHHTSCCEE
T ss_pred hCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCC--------------CcccccccCCcCeeChHHHhhcccCCCCC
Confidence 9999999999999999999999999999997643211 11224468999999999987 23568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHh
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQ 659 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~ 659 (1170)
+.++|||||||++|||++ ||......+....++.. ...+|..+...++++++||++||+.+|++ ||+++++++
T Consensus 259 ~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~ 338 (437)
T 4aw2_A 259 GPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKK 338 (437)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHT
T ss_pred CCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhC
Confidence 999999999999999997 88877666665555432 34566666678899999999999999888 999999999
Q ss_pred ccCCCCchHHHH
Q 001059 660 DALPPQMEYELL 671 (1170)
Q Consensus 660 ~~~~~~~~~~~~ 671 (1170)
||||....|+.+
T Consensus 339 Hpff~~i~w~~l 350 (437)
T 4aw2_A 339 HPFFSGIDWDNI 350 (437)
T ss_dssp SGGGTTCCTTTG
T ss_pred CCccCCCCHHHH
Confidence 999999988755
|
| >3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-41 Score=408.92 Aligned_cols=259 Identities=28% Similarity=0.510 Sum_probs=215.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+...++|++++.||+|+||+||+|+++.+|..||||+++...........+.+|+.+|+.++||||++++++|.+
T Consensus 33 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~----- 107 (494)
T 3lij_A 33 GHLSEMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFED----- 107 (494)
T ss_dssp CCHHHHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred CchhcCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEe-----
Confidence 445578999999999999999999999999999999998655444446789999999999999999999998832
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+||
T Consensus 108 -----------------------------------~~~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 152 (494)
T 3lij_A 108 -----------------------------------KRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYL 152 (494)
T ss_dssp -----------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 59999998888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
|++||+||||||+|||++.. +.+||+|||+|+...... .....+||+.|+|||++.+ .|
T Consensus 153 H~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~~y~aPE~l~~--~~ 214 (494)
T 3lij_A 153 HKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQK----------------KMKERLGTAYYIAPEVLRK--KY 214 (494)
T ss_dssp HHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTB----------------CBCCCCSCTTTCCHHHHTT--CB
T ss_pred HHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCc----------------cccccCCCcCeeCHHHHcc--cC
Confidence 99999999999999999764 559999999998653221 1234579999999999875 58
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++|||||||++|+|++ ||......+....+......++ +.+...++++.+||++||+.||.+|||+.++|+|||
T Consensus 215 ~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~hp~ 294 (494)
T 3lij_A 215 DEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294 (494)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTCHH
T ss_pred CCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhcCcc
Confidence 999999999999999996 8887777666665555444443 456778899999999999999999999999999999
Q ss_pred CCCch
Q 001059 663 PPQME 667 (1170)
Q Consensus 663 ~~~~~ 667 (1170)
+....
T Consensus 295 ~~~~~ 299 (494)
T 3lij_A 295 IKEMC 299 (494)
T ss_dssp HHHHH
T ss_pred cccCc
Confidence 87653
|
| >3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-41 Score=400.45 Aligned_cols=283 Identities=25% Similarity=0.379 Sum_probs=213.5
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.....++|++.+.||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|+.++||||+++++++....
T Consensus 21 ~~~i~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~-- 98 (432)
T 3n9x_A 21 NVHVPDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDD-- 98 (432)
T ss_dssp GCCCCTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC--
T ss_pred cceecCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCC--
Confidence 344568999999999999999999999999999999999765555566678999999999999999999999874321
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
......+|+|||||+++|.+++.....+++..++.++.||+.||+||
T Consensus 99 ---------------------------------~~~~~~~~lv~e~~~~~L~~~~~~~~~l~~~~~~~i~~qil~aL~~L 145 (432)
T 3n9x_A 99 ---------------------------------LLKFDELYIVLEIADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFI 145 (432)
T ss_dssp ---------------------------------TTTCCCEEEEEECCSEEHHHHHHSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCcCCeEEEEEecCCcCHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 01235689999999999999999888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCC------CC-CCCCCccccCcccccCccCCCcccccC
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAA------FP-TDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|++||+||||||+|||++.++.+||+|||+|+............ .+ ..........+..+||++|+|||++..
T Consensus 146 H~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~ 225 (432)
T 3n9x_A 146 HESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILL 225 (432)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTT
T ss_pred HHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhc
Confidence 99999999999999999999999999999998764322110000 00 000000112366799999999999765
Q ss_pred CCCCCccchhHHHHHHHHHhhc-------------CCC-chh-----------------HHHHHHHHhhhcCC-------
Q 001059 583 WPKIDEKADMYSLGIVFFELWH-------------PFS-TAM-----------------ERQIVLSDLKQKGE------- 624 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt-------------Pf~-~~~-----------------~~~~~~~~l~~~~~------- 624 (1170)
...|+.++|||||||++|||++ |+. +.. .......+....+.
T Consensus 226 ~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~ 305 (432)
T 3n9x_A 226 QENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLK 305 (432)
T ss_dssp CSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHH
T ss_pred CCCCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHH
Confidence 5679999999999999999994 221 110 01111111110010
Q ss_pred -----------------CC----CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 625 -----------------LP----PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 625 -----------------~p----~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+ ..+...++++.+||++||+.||.+|||++++|+||||....
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 369 (432)
T 3n9x_A 306 NINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVR 369 (432)
T ss_dssp TCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTC
T ss_pred hccCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhcc
Confidence 01 11245678999999999999999999999999999998864
|
| >3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-41 Score=389.00 Aligned_cols=271 Identities=22% Similarity=0.393 Sum_probs=217.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||||++............+.+|+.+|+.++||||+++++++......
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~--- 91 (351)
T 3mi9_A 15 EVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP--- 91 (351)
T ss_dssp BGGGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC------
T ss_pred cccceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccc---
Confidence 46899999999999999999999999999999999976655444556788999999999999999999998543100
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.......+|+|||||+++|.+.+... ..+++..++.++.||+.||+|||+
T Consensus 92 -----------------------------~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 142 (351)
T 3mi9_A 92 -----------------------------YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHR 142 (351)
T ss_dssp ----------------------------------CEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------cccCCceEEEEEeccCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00124578999999999988887654 569999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+|+.+...... ........+||+.|+|||++.+...++.++|
T Consensus 143 ~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~D 211 (351)
T 3mi9_A 143 NKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNS-----------QPNRYTNRVVTLWYRPPELLLGERDYGPPID 211 (351)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSS-----------SCCCCCSSCSCGGGCCHHHHTTCCSCCTHHH
T ss_pred CCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccc-----------cccccCCcccccCccCchhhcCCCCCCcHhH
Confidence 99999999999999999999999999999865422111 0112345689999999999987566899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCc-ccc----------------------------CCHHHHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPS-WVA----------------------------KFSEQESL 639 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~-~~~----------------------------~~~e~~~L 639 (1170)
||||||++|||++ ||...........+....+..++. +.. .++++.+|
T Consensus 212 iwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 291 (351)
T 3mi9_A 212 LWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDL 291 (351)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHH
Confidence 9999999999997 777665555444443333333221 111 25678999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|.+||+.||.+|||+.++|+||||...
T Consensus 292 i~~~L~~dP~~R~t~~e~l~hp~f~~~ 318 (351)
T 3mi9_A 292 IDKLLVLDPAQRIDSDDALNHDFFWSD 318 (351)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSGGGGSS
T ss_pred HHHHhcCChhhCCCHHHHhCCCCcCCC
Confidence 999999999999999999999999764
|
| >3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-41 Score=391.21 Aligned_cols=258 Identities=27% Similarity=0.411 Sum_probs=201.9
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
.+.....++|++++.||+|+||+||+|+++.+|+.||||++..... ....+.+|+.+++.++||||++++++|..
T Consensus 13 ~~~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~-- 87 (361)
T 3uc3_A 13 MPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA---IDENVQREIINHRSLRHPNIVRFKEVILT-- 87 (361)
T ss_dssp CCCCCCTTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT---SCHHHHHHHHHHHHCCCTTBCCEEEEEEC--
T ss_pred ccCCCCCCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc---ccHHHHHHHHHHHhCCCCCCCcEEEEEee--
Confidence 3445556899999999999999999999999999999999975433 23568899999999999999999998843
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||
T Consensus 88 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~ql~~~L 129 (361)
T 3uc3_A 88 --------------------------------------PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGV 129 (361)
T ss_dssp --------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHH
Confidence 456899999996 59999998888999999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCC--EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~--vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
+|||++||+||||||+|||++.++. +||+|||+|+...... .....+||+.|+|||++.+..
T Consensus 130 ~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 193 (361)
T 3uc3_A 130 SYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS----------------QPKSTVGTPAYIAPEVLLRQE 193 (361)
T ss_dssp HHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------------------------------CTTSCHHHHHCSS
T ss_pred HHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC----------------CCCCCcCCCCcCChhhhcCCC
Confidence 9999999999999999999987765 9999999997432111 123457999999999998744
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhH----HHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAME----RQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~----~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
..+.++|||||||++|+|++ ||..... .............+ +.....++++.+||++||+.||.+|||+.++
T Consensus 194 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~Rps~~el 272 (361)
T 3uc3_A 194 YDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSI-PDDIRISPECCHLISRIFVADPATRISIPEI 272 (361)
T ss_dssp CCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCC-CTTSCCCHHHHHHHHHHSCSCTTTSCCHHHH
T ss_pred CCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCC-CCcCCCCHHHHHHHHHHccCChhHCcCHHHH
Confidence 33455999999999999996 7765433 22222222222223 3334567899999999999999999999999
Q ss_pred HhccCCCC
Q 001059 658 LQDALPPQ 665 (1170)
Q Consensus 658 L~~~~~~~ 665 (1170)
++||||..
T Consensus 273 l~hp~f~~ 280 (361)
T 3uc3_A 273 KTHSWFLK 280 (361)
T ss_dssp HTSHHHHT
T ss_pred HhCcchhc
Confidence 99999844
|
| >3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-41 Score=383.58 Aligned_cols=259 Identities=27% Similarity=0.415 Sum_probs=209.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
..++|++.+.||+|+||+||+|++. .+|+.||+|+++.... .......+.+|+.+|+.++||||++++++|..
T Consensus 15 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-- 92 (327)
T 3a62_A 15 RPECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQT-- 92 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEEC--
T ss_pred CHHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEc--
Confidence 3578999999999999999999985 6899999999975432 12234567899999999999999999988732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al 134 (327)
T 3a62_A 93 --------------------------------------GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMAL 134 (327)
T ss_dssp --------------------------------------SSCEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEeCCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHH
Confidence 356899999997 59999999888899999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..+
T Consensus 135 ~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~ 198 (327)
T 3a62_A 135 GHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG---------------TVTHTFCGTIEYMAPEILMR-SGH 198 (327)
T ss_dssp HHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------------------------CTTSSCCTTSCHHHHTT-SCC
T ss_pred HHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC---------------ccccccCCCcCccCHhhCcC-CCC
Confidence 99999999999999999999999999999999997542111 01234579999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHH
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELL 658 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL 658 (1170)
+.++|||||||++|||++ ||...........+......+|+ ..++++.+||++||..||.+|| ++.+++
T Consensus 199 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l 275 (327)
T 3a62_A 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLPP---YLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275 (327)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHH
T ss_pred CCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCC---CCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHH
Confidence 999999999999999996 88776666655555554444443 4567999999999999999999 899999
Q ss_pred hccCCCCchHHH
Q 001059 659 QDALPPQMEYEL 670 (1170)
Q Consensus 659 ~~~~~~~~~~~~ 670 (1170)
+||||....++.
T Consensus 276 ~hp~f~~~~~~~ 287 (327)
T 3a62_A 276 AHPFFRHINWEE 287 (327)
T ss_dssp HSGGGSSCCHHH
T ss_pred cCCcccCCCHHH
Confidence 999999887654
|
| >3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.6e-41 Score=376.14 Aligned_cols=258 Identities=27% Similarity=0.450 Sum_probs=211.3
Q ss_pred CCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 349 ~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..+...++|.+.+.||+|+||+||+|.++.+|..||+|++..... ....+.+.+|+.+|+.++||||++++++|..
T Consensus 16 ~~g~i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 91 (285)
T 3is5_A 16 FQGTIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRS-QVPMEQIEAEIEVLKSLDHPNIIKIFEVFED--- 91 (285)
T ss_dssp ESSCHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-CSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---
T ss_pred CCCChhhheeecceeccCCCeEEEEEEEccCCceEEEEEeecccc-chhHHHHHHHHHHHHhCCCchHHhHHHheec---
Confidence 345667899999999999999999999999999999999976532 2335678999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~ 503 (1170)
...+|+|||||+ ++|.+.+.. ...+++..++.++.||+
T Consensus 92 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 134 (285)
T 3is5_A 92 -------------------------------------YHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMM 134 (285)
T ss_dssp -------------------------------------SSEEEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHH
Confidence 456899999997 489888754 36799999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
.||+|||++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++
T Consensus 135 ~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~t~~y~aPE~~ 198 (285)
T 3is5_A 135 NALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDE----------------HSTNAAGTALYMAPEVF 198 (285)
T ss_dssp HHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------------------------CTTGGGCCHHHH
T ss_pred HHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcc----------------cCcCcccccCcCChHHh
Confidence 99999999999999999999999 445789999999997653211 12345799999999998
Q ss_pred cCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 581 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 581 ~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
.+ .++.++|||||||++|+|++ ||......+............+......++++.+||++||+.||.+|||+.++
T Consensus 199 ~~--~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~ 276 (285)
T 3is5_A 199 KR--DVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQV 276 (285)
T ss_dssp TT--CCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHH
T ss_pred cc--CCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccccCcCCHHHHHHHHHHccCChhhCcCHHHH
Confidence 75 58999999999999999996 88776655555444444444444445567899999999999999999999999
Q ss_pred HhccCCCC
Q 001059 658 LQDALPPQ 665 (1170)
Q Consensus 658 L~~~~~~~ 665 (1170)
|+||||++
T Consensus 277 l~hp~f~~ 284 (285)
T 3is5_A 277 LHHEWFKQ 284 (285)
T ss_dssp HTSGGGGC
T ss_pred hcCHHhhc
Confidence 99999975
|
| >2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-41 Score=380.61 Aligned_cols=257 Identities=24% Similarity=0.381 Sum_probs=204.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh------------------------hhHHHHHHHHHHH
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL------------------------PVNDRILREVATL 408 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~------------------------~~~~~~~~Ev~iL 408 (1170)
.+++|++.+.||+|+||+||+|++..+|+.||||++....... ...+.+.+|+.+|
T Consensus 11 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 90 (298)
T 2zv2_A 11 QLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAIL 90 (298)
T ss_dssp EETTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHH
T ss_pred eecceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHH
Confidence 4689999999999999999999999999999999997543211 1234688999999
Q ss_pred HhccCCCceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc
Q 001059 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY 487 (1170)
Q Consensus 409 ~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~ 487 (1170)
+.++||||+++++++.+. ....+|+|||||++ +|.+++ ..
T Consensus 91 ~~l~h~~iv~~~~~~~~~--------------------------------------~~~~~~lv~e~~~~~~l~~~~-~~ 131 (298)
T 2zv2_A 91 KKLDHPNVVKLVEVLDDP--------------------------------------NEDHLYMVFELVNQGPVMEVP-TL 131 (298)
T ss_dssp HTCCCTTBCCEEEEEECS--------------------------------------SSSEEEEEEECCTTCBSCCSS-CS
T ss_pred HhCCCCCCCeEEEEEEcC--------------------------------------CCCEEEEEEecCCCCcHHHHh-hc
Confidence 999999999999987432 24578999999974 776644 34
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcc
Q 001059 488 DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTG 567 (1170)
Q Consensus 488 ~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~ 567 (1170)
..+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .....
T Consensus 132 ~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~ 196 (298)
T 2zv2_A 132 KPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD---------------ALLSN 196 (298)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSS---------------CEECC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCCEEEecCCCcccccccc---------------ccccC
Confidence 579999999999999999999999999999999999999999999999999998653211 01134
Q ss_pred cccCccCCCcccccCCCC--CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHH
Q 001059 568 QVGTYFYTAPEIEQGWPK--IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642 (1170)
Q Consensus 568 ~~GT~~Y~APE~l~~~~~--~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~ 642 (1170)
..||+.|+|||++.+... ++.++|||||||++|+|++ ||................... +.....++++.+||.+
T Consensus 197 ~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~ 275 (298)
T 2zv2_A 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEF-PDQPDIAEDLKDLITR 275 (298)
T ss_dssp CCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCC-CSSSCCCHHHHHHHHH
T ss_pred CcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCC-CCccccCHHHHHHHHH
Confidence 579999999999987432 4788999999999999996 887655444433333322222 3344677899999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCC
Q 001059 643 LMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
||+.||.+|||+.++++||||.
T Consensus 276 ~l~~dp~~R~s~~e~l~hp~~~ 297 (298)
T 2zv2_A 276 MLDKNPESRIVVPEIKLHPWVT 297 (298)
T ss_dssp HTCSCTTTSCCHHHHTTCHHHH
T ss_pred HhhcChhhCCCHHHHhcCcccc
Confidence 9999999999999999999874
|
| >3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-41 Score=401.58 Aligned_cols=261 Identities=23% Similarity=0.380 Sum_probs=216.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++++.||+|+||+||+|+++.+|+.||+|+++.... .......+.+|+.+++.++|||||+++++|.
T Consensus 68 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~-------- 139 (410)
T 3v8s_A 68 AEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQ-------- 139 (410)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEE--------
T ss_pred ccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEE--------
Confidence 4789999999999999999999999999999999974211 0111234788999999999999999999883
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
+...+|+|||||+ |+|.+++.. ..+++..++.++.||+.||+|||+
T Consensus 140 --------------------------------~~~~~~lV~E~~~gg~L~~~l~~-~~~~e~~~~~~~~qi~~aL~~LH~ 186 (410)
T 3v8s_A 140 --------------------------------DDRYLYMVMEYMPGGDLVNLMSN-YDVPEKWARFYTAEVVLALDAIHS 186 (410)
T ss_dssp --------------------------------CSSEEEEEECCCTTEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------ECCEEEEEEeCCCCCcHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2467899999996 599998865 469999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC---CCc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK---IDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~---~~~ 588 (1170)
+||+||||||+|||++.++++||+|||+|+...... .....+.+||+.|+|||++.+... |+.
T Consensus 187 ~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~--------------~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~ 252 (410)
T 3v8s_A 187 MGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG--------------MVRCDTAVGTPDYISPEVLKSQGGDGYYGR 252 (410)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------EEECCSCCSCGGGCCHHHHHTTTTTCEEET
T ss_pred CCeEeccCCHHHeeECCCCCEEEeccceeEeeccCC--------------cccccCCcCCccccCHHHhhccCCCcCCCC
Confidence 999999999999999999999999999998653221 112245689999999999986332 789
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc--CCCCCccccCCHHHHHHHHHccCCCCCC--CCCHHHHHhcc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK--GELPPSWVAKFSEQESLLRRLMSPSPSD--RPSATELLQDA 661 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~--~~~p~~~~~~~~e~~~LI~~~L~~dP~~--RPta~eiL~~~ 661 (1170)
++|||||||++|||++ ||...........++... ..+| .+...++++++||++||+.+|.+ ||++++|++||
T Consensus 253 ~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p-~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp 331 (410)
T 3v8s_A 253 ECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFP-DDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 331 (410)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC-TTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSG
T ss_pred cceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCC-CcccccHHHHHHHHHHccChhhhCCCCCHHHHhcCc
Confidence 9999999999999996 888777666665555432 2233 34467889999999999999988 99999999999
Q ss_pred CCCCchHHH
Q 001059 662 LPPQMEYEL 670 (1170)
Q Consensus 662 ~~~~~~~~~ 670 (1170)
||....|+.
T Consensus 332 ~f~~~~w~~ 340 (410)
T 3v8s_A 332 FFKNDQWAW 340 (410)
T ss_dssp GGCCSSCCS
T ss_pred cccCCCHHH
Confidence 999987654
|
| >4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-41 Score=403.40 Aligned_cols=259 Identities=27% Similarity=0.384 Sum_probs=211.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++++.||+|+||.||+|+++.+|+.||||+++... ........+.+|+.+|+.++||||++++++|..
T Consensus 146 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~------ 219 (446)
T 4ejn_A 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQT------ 219 (446)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEE------
T ss_pred ChHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEee------
Confidence 3578999999999999999999999999999999997532 122334567899999999999999999998843
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 220 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH 265 (446)
T 4ejn_A 220 ----------------------------------HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDYLH 265 (446)
T ss_dssp ----------------------------------TTEEEEEECCCSSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEeeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHh
Confidence 356899999997 599999988889999999999999999999999
Q ss_pred h-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 G-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
+ +||+||||||+|||++.++.+||+|||+|+...... ......+||+.|+|||++.+ ..|+.+
T Consensus 266 ~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 329 (446)
T 4ejn_A 266 SEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRA 329 (446)
T ss_dssp HHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC--------------------CCSSSCGGGCCHHHHHT-SCCCTH
T ss_pred hcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC---------------cccccccCCccccCHhhcCC-CCCCCc
Confidence 8 999999999999999999999999999997532111 11245689999999999987 579999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhcc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDA 661 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~ 661 (1170)
+|||||||++|||++ ||...........+......+|. ..++++.+||.+||+.||.+|| +++++++||
T Consensus 330 ~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp 406 (446)
T 4ejn_A 330 VDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR---TLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHR 406 (446)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSG
T ss_pred cchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCc
Confidence 999999999999997 88776666655555554444443 4567999999999999999999 999999999
Q ss_pred CCCCchHHH
Q 001059 662 LPPQMEYEL 670 (1170)
Q Consensus 662 ~~~~~~~~~ 670 (1170)
||....++.
T Consensus 407 ~f~~~~~~~ 415 (446)
T 4ejn_A 407 FFAGIVWQH 415 (446)
T ss_dssp GGTTCCHHH
T ss_pred cccCCCHHH
Confidence 999987654
|
| >2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-41 Score=400.91 Aligned_cols=263 Identities=25% Similarity=0.400 Sum_probs=216.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|..++||||++++++|.
T Consensus 60 ~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~-------- 131 (412)
T 2vd5_A 60 RDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQ-------- 131 (412)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEE--------
T ss_pred hhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEe--------
Confidence 4789999999999999999999999999999999974221 1112345788999999999999999998873
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+..++|+|||||+ |+|.+++...+ .+++..++.++.||+.||+|||
T Consensus 132 --------------------------------~~~~~~lVmE~~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~LH 179 (412)
T 2vd5_A 132 --------------------------------DENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVH 179 (412)
T ss_dssp --------------------------------CSSEEEEEECCCCSCBHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEcCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2467899999995 69999998754 7999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC------CC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG------WP 584 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~------~~ 584 (1170)
++||+||||||+|||++.++++||+|||+|+...... .......+||+.|+|||++.+ ..
T Consensus 180 ~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~--------------~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~ 245 (412)
T 2vd5_A 180 RLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADG--------------TVRSLVAVGTPDYLSPEILQAVGGGPGTG 245 (412)
T ss_dssp HTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTS--------------CEECSSCCSCGGGCCHHHHHHHHTCTTCS
T ss_pred HCCeeecccCHHHeeecCCCCEEEeechhheeccCCC--------------ccccceeccccCcCCHHHHhhcccCcCCC
Confidence 9999999999999999999999999999998653211 111234689999999999872 24
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCC---CCHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDR---PSATE 656 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~R---Pta~e 656 (1170)
.|+.++|||||||++|||++ ||......+....+... ...+|......++++++||++||+ +|.+| |++++
T Consensus 246 ~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~e 324 (412)
T 2vd5_A 246 SYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGD 324 (412)
T ss_dssp EECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHH
T ss_pred CCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHH
Confidence 58999999999999999996 88877666655555432 234454445678899999999999 99998 69999
Q ss_pred HHhccCCCCchHHHH
Q 001059 657 LLQDALPPQMEYELL 671 (1170)
Q Consensus 657 iL~~~~~~~~~~~~~ 671 (1170)
+++||||....|+.+
T Consensus 325 i~~Hpff~~i~w~~l 339 (412)
T 2vd5_A 325 FRTHPFFFGLDWDGL 339 (412)
T ss_dssp HHTSGGGTTCCSTTS
T ss_pred HhcCCCcCCCCHHHH
Confidence 999999999887654
|
| >3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-41 Score=394.29 Aligned_cols=267 Identities=20% Similarity=0.288 Sum_probs=211.9
Q ss_pred cCCceEEeeeccC--CcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHG--GFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G--~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.++|++++.||+| +||+||+|+++.+|+.||||+++...........+.+|+.+|+.++|||||+++++|.+
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 97 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIA------ 97 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE------
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEE------
Confidence 4689999999999 99999999999999999999998776666667788999999999999999999999843
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|
T Consensus 98 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~ 143 (389)
T 3gni_B 98 ----------------------------------DNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDY 143 (389)
T ss_dssp ----------------------------------TTEEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 356899999997 5999998765 679999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~ 587 (1170)
||++||+||||||+|||++.++.+||+|||++............ ........+||+.|+|||++.+. ..++
T Consensus 144 LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 215 (389)
T 3gni_B 144 IHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRV--------VHDFPKYSVKVLPWLSPEVLQQNLQGYD 215 (389)
T ss_dssp HHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSC--------BCCCCTTCTTTGGGSCHHHHSTTSSCBC
T ss_pred HHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccc--------cccccccccccccccCHHHHhccCCCCC
Confidence 99999999999999999999999999999998765322111000 00112345899999999999873 4589
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC----------------------------------------
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE---------------------------------------- 624 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~---------------------------------------- 624 (1170)
.++|||||||++|||++ ||............+.....
T Consensus 216 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (389)
T 3gni_B 216 AKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNG 295 (389)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC----------------------------------------------
T ss_pred cHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCccccccccccccccccccccccccccccccccCccccccC
Confidence 99999999999999997 77654333222222111000
Q ss_pred ---CCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 625 ---LPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 625 ---~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
..+.+...++++.+||++||+.||.+|||+.++|+||||.+...
T Consensus 296 ~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~f~~~~~ 342 (389)
T 3gni_B 296 DSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFKQIKR 342 (389)
T ss_dssp ----------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGGGC--
T ss_pred CCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHHHHHHhh
Confidence 00123345678999999999999999999999999999987653
|
| >3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-41 Score=390.63 Aligned_cols=258 Identities=25% Similarity=0.446 Sum_probs=210.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC---CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~---~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.+.++|++.+.||+|+||+||+|+++.+|+.||||+++... ......+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--- 97 (351)
T 3c0i_A 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSS--- 97 (351)
T ss_dssp CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEE---
T ss_pred ccccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 44578999999999999999999999999999999996432 111235678999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIV 503 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~ 503 (1170)
...+|+|||||+ ++|.+.+... ..+++..++.++.||+
T Consensus 98 -------------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 140 (351)
T 3c0i_A 98 -------------------------------------DGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140 (351)
T ss_dssp -------------------------------------TTEEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCEEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHH
Confidence 357899999997 5898777543 2489999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
.||+|||++||+||||||+|||++.++. +||+|||+++...... ......+||+.|+|||++
T Consensus 141 ~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~ 205 (351)
T 3c0i_A 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG---------------LVAGGRVGTPHFMAPEVV 205 (351)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS---------------CBCCCCCSCGGGCCHHHH
T ss_pred HHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCC---------------eeecCCcCCcCccCHHHH
Confidence 9999999999999999999999987654 9999999998653211 112345899999999999
Q ss_pred cCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 581 QGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 581 ~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
.+ ..++.++|||||||++|+|++ ||..... .....+.......+ ..+...++++.+||++||+.||.+|||+.+
T Consensus 206 ~~-~~~~~~~DiwslG~il~~ll~g~~pf~~~~~-~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e 283 (351)
T 3c0i_A 206 KR-EPYGKPVDVWGCGVILFILLSGCLPFYGTKE-RLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYE 283 (351)
T ss_dssp TT-CCBCTHHHHHHHHHHHHHHHHSSCSSCSSHH-HHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred cC-CCCCchHhhHHHHHHHHHHHHCCCCCCCcHH-HHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHH
Confidence 87 568999999999999999997 7766433 33333333333333 345677889999999999999999999999
Q ss_pred HHhccCCCCc
Q 001059 657 LLQDALPPQM 666 (1170)
Q Consensus 657 iL~~~~~~~~ 666 (1170)
+|+|||+...
T Consensus 284 ~l~hp~~~~~ 293 (351)
T 3c0i_A 284 ALNHPWLKER 293 (351)
T ss_dssp HHTSHHHHTH
T ss_pred HhcChhhcCC
Confidence 9999998654
|
| >1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-40 Score=371.44 Aligned_cols=256 Identities=24% Similarity=0.374 Sum_probs=215.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
..|++.+.||+|+||+||+|.+..++..||+|++..........+.+.+|+.+|+.++||||++++++|....
T Consensus 26 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~------- 98 (290)
T 1t4h_A 26 RFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV------- 98 (290)
T ss_dssp CEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES-------
T ss_pred eeEEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecccc-------
Confidence 4588999999999999999999999999999999876666666778999999999999999999999885421
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
.....+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||++|
T Consensus 99 -----------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 149 (290)
T 1t4h_A 99 -----------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRT 149 (290)
T ss_dssp -----------------------------SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSS
T ss_pred -----------------------------CCCceEEEEEEecCCCCHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHcCC
Confidence 13467899999996 599999998888999999999999999999999999
Q ss_pred --ccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 514 --IIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 514 --IiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
|+||||||+|||++ .++.+||+|||++...... ......||+.|+|||++.+ .++.++
T Consensus 150 ~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~t~~y~aPE~~~~--~~~~~~ 210 (290)
T 1t4h_A 150 PPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESV 210 (290)
T ss_dssp SCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHH
T ss_pred CCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc-----------------ccccccCCcCcCCHHHHhc--cCCCcc
Confidence 99999999999998 7899999999999753211 1134579999999999886 489999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
|||||||++|+|++ ||...................+......++++.+||.+||+.||.+|||+.++++||||..
T Consensus 211 Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~f~~ 288 (290)
T 1t4h_A 211 DVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQE 288 (290)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC-
T ss_pred hHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhhCccccc
Confidence 99999999999997 8876555444444444333333334455689999999999999999999999999999975
|
| >3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=404.56 Aligned_cols=259 Identities=27% Similarity=0.508 Sum_probs=215.9
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-----------hhHHHHHHHHHHHHhccCCCcee
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-----------PVNDRILREVATLSRLQHQHVVR 418 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-----------~~~~~~~~Ev~iL~~l~HpnIV~ 418 (1170)
.+...++|+++++||+|+||+||+|+++.+++.||||+++...... ...+.+.+|+.+|+.++||||++
T Consensus 31 ~~~i~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~ 110 (504)
T 3q5i_A 31 EGKIGESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIK 110 (504)
T ss_dssp CSCGGGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCC
T ss_pred CCCcccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCe
Confidence 3455689999999999999999999999999999999997543221 23567899999999999999999
Q ss_pred EEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHH
Q 001059 419 YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWH 497 (1170)
Q Consensus 419 l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~ 497 (1170)
++++|.+ ...+|+|||||+ ++|.+.+.....+++..++.
T Consensus 111 ~~~~~~~----------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~ 150 (504)
T 3q5i_A 111 LFDVFED----------------------------------------KKYFYLVTEFYEGGELFEQIINRHKFDECDAAN 150 (504)
T ss_dssp EEEEEEC----------------------------------------SSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHH
T ss_pred EEEEEEc----------------------------------------CCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHH
Confidence 9998832 457899999996 59999998888999999999
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccC
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFY 574 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y 574 (1170)
++.||+.||+|||++||+||||||+|||++.++ .+||+|||+|+...... .....+||+.|
T Consensus 151 i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y 214 (504)
T 3q5i_A 151 IMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY----------------KLRDRLGTAYY 214 (504)
T ss_dssp HHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEECCTTS----------------CBCCCCSCTTT
T ss_pred HHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEcCCCC----------------ccccccCCcCC
Confidence 999999999999999999999999999998775 69999999998653211 12345799999
Q ss_pred CCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCC
Q 001059 575 TAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 575 ~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
+|||++.+ .|+.++|||||||++|+|++ ||......+....+.......+ +.+...++++++||++||+.||.+
T Consensus 215 ~aPE~~~~--~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~ 292 (504)
T 3q5i_A 215 IAPEVLKK--KYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNK 292 (504)
T ss_dssp CCHHHHTT--CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred CCHHHhcc--CCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhH
Confidence 99999875 58999999999999999997 8887776666655554443333 355678899999999999999999
Q ss_pred CCCHHHHHhccCCCCc
Q 001059 651 RPSATELLQDALPPQM 666 (1170)
Q Consensus 651 RPta~eiL~~~~~~~~ 666 (1170)
|||+.++|+|||+...
T Consensus 293 R~t~~e~l~h~~~~~~ 308 (504)
T 3q5i_A 293 RCTAEEALNSRWIKKY 308 (504)
T ss_dssp SCCHHHHHTSHHHHHT
T ss_pred CCCHHHHhcCHhhhhc
Confidence 9999999999997543
|
| >3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-41 Score=386.69 Aligned_cols=258 Identities=25% Similarity=0.395 Sum_probs=205.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||+++..... .....+.+|+.+|+.++||||+++++++..
T Consensus 1 l~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 71 (324)
T 3mtl_A 1 METYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEE-GAPCTAIREVSLLKDLKHANIVTLHDIIHT-------- 71 (324)
T ss_dssp CCSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC-------CCCCCCCHHHHSCCCCTTBCCEEEEEEC--------
T ss_pred CCceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEeccccc-ccchhHHHHHHHHHhcCCCCCCeeeeEEee--------
Confidence 46899999999999999999999999999999999754321 112245679999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+++|.+++.... .+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~ 119 (324)
T 3mtl_A 72 --------------------------------EKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQ 119 (324)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEecccccCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35679999999999999887654 599999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+...++.++||
T Consensus 120 ~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 184 (324)
T 3mtl_A 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPT---------------KTYDNEVVTLWYRPPDILLGSTDYSTQIDM 184 (324)
T ss_dssp TEEESSCCGGGEEECTTCCEEECSSSEEECC---------------------------CGGGCCHHHHTTCCCCCTHHHH
T ss_pred CccCCCcCHHHEEECCCCCEEEccCcccccccCCc---------------cccccccCcccccChhhhcCCCCCCcHHHH
Confidence 99999999999999999999999999997543211 112345789999999999876678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC---------------------------ccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP---------------------------SWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~---------------------------~~~~~~~e~~~LI~~ 642 (1170)
|||||++|+|++ ||......+....+....+..++ .....++++.+||++
T Consensus 185 wslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 264 (324)
T 3mtl_A 185 WGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTK 264 (324)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHH
Confidence 999999999997 88766655544443332221111 112356788999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.++|+||||....
T Consensus 265 ~L~~dP~~R~t~~e~l~hp~f~~~~ 289 (324)
T 3mtl_A 265 LLQFEGRNRISAEDAMKHPFFLSLG 289 (324)
T ss_dssp HSCSSGGGSCCHHHHTTSGGGGGGC
T ss_pred HcCcCcccCCCHHHHhcChhhhhcc
Confidence 9999999999999999999998764
|
| >2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=385.01 Aligned_cols=255 Identities=27% Similarity=0.400 Sum_probs=199.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|+++.+++.||||+++... ..+.+.+|+.+|++++||||++++++|..
T Consensus 50 ~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~------ 119 (349)
T 2w4o_A 50 ALSDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV----DKKIVRTEIGVLLRLSHPNIIKLKEIFET------ 119 (349)
T ss_dssp CGGGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC--------------CHHHHHCCCTTBCCEEEEEEC------
T ss_pred cccCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch----hHHHHHHHHHHHHhCCCCCCcceeeeEec------
Confidence 34577999999999999999999999999999999997432 23567899999999999999999998832
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|||
T Consensus 120 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~LH 165 (349)
T 2w4o_A 120 ----------------------------------PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165 (349)
T ss_dssp ----------------------------------SSEEEEEECCCCSCBHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 599999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+ ..++
T Consensus 166 ~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~ 228 (349)
T 2w4o_A 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV----------------LMKTVCGTPGYCAPEILRG-CAYG 228 (349)
T ss_dssp HTTCCCCCCCGGGEEESSSSTTCCEEECCCC--------------------------------CGGGSCHHHHTT-CCCC
T ss_pred HCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc----------------ccccccCCCCccCHHHhcC-CCCC
Confidence 999999999999999975 7899999999998653211 1234579999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHH-hhhcCCC-CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSD-LKQKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~-l~~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
.++|||||||++|||++ ||......+..... ....... ++.+...++++.+||++||+.||.+|||+.++|+|||
T Consensus 229 ~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~ 308 (349)
T 2w4o_A 229 PEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPW 308 (349)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTT
T ss_pred cccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcCcc
Confidence 99999999999999997 77665554433333 3322222 2345667889999999999999999999999999999
Q ss_pred CCCch
Q 001059 663 PPQME 667 (1170)
Q Consensus 663 ~~~~~ 667 (1170)
+.+..
T Consensus 309 ~~~~~ 313 (349)
T 2w4o_A 309 VTGKA 313 (349)
T ss_dssp TTSTT
T ss_pred cCCCc
Confidence 98654
|
| >2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=378.06 Aligned_cols=262 Identities=24% Similarity=0.366 Sum_probs=219.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhccCCCceeEEEEEeec
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
....++|++.+.||+|+||.||+|+++.+|+.||||+++...... ...+.+.+|+.+++.++||||++++++|.+
T Consensus 8 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 86 (321)
T 2a2a_A 8 QKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYEN- 86 (321)
T ss_dssp SCHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-
T ss_pred hhhhccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEec-
Confidence 345578999999999999999999999999999999997654321 135678999999999999999999998732
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 87 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~a 127 (321)
T 2a2a_A 87 ---------------------------------------RTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDG 127 (321)
T ss_dssp ---------------------------------------SSEEEEEECCCCSCBHHHHHHTCSCEEHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 456899999996 5999999988889999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCC----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+|||++||+||||||+|||++.++ .+||+|||+++...... ......||+.|+|||++.
T Consensus 128 L~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 191 (321)
T 2a2a_A 128 VNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGV----------------EFKNIFGTPEFVAPEIVN 191 (321)
T ss_dssp HHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTC----------------CCCCCCSCGGGCCHHHHT
T ss_pred HHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccc----------------cccccCCCCCccCccccc
Confidence 9999999999999999999999887 79999999998653211 123457999999999998
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
+ ..++.++|||||||++|+|++ ||......+............++ .+...++.+.+||++||+.||.+|||+.++
T Consensus 192 ~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~ 270 (321)
T 2a2a_A 192 Y-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEA 270 (321)
T ss_dssp T-CCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHH
T ss_pred C-CCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHH
Confidence 7 568999999999999999997 88766655555444443333333 235667889999999999999999999999
Q ss_pred HhccCCCCchHH
Q 001059 658 LQDALPPQMEYE 669 (1170)
Q Consensus 658 L~~~~~~~~~~~ 669 (1170)
++|||+......
T Consensus 271 l~hp~~~~~~~~ 282 (321)
T 2a2a_A 271 LRHPWITPVDNQ 282 (321)
T ss_dssp HHSTTTSCSSHH
T ss_pred hcCccccCCCcc
Confidence 999999987644
|
| >1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=370.38 Aligned_cols=255 Identities=31% Similarity=0.466 Sum_probs=208.2
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
.+++.++|++.+.||+|+||+||+|.++.+|+.||||+++...........+.+|+..+..+ +||||++++++|.+
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~--- 82 (289)
T 1x8b_A 6 KSRYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAE--- 82 (289)
T ss_dssp CCHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEE---
T ss_pred cccccchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeec---
Confidence 35667899999999999999999999999999999999987655555667899999999999 99999999998843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc----CCCCHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIV 503 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qI~ 503 (1170)
...+|+|||||++ +|.+++... ..+++..++.++.||+
T Consensus 83 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~ 125 (289)
T 1x8b_A 83 -------------------------------------DDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVG 125 (289)
T ss_dssp -------------------------------------TTEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHH
Confidence 3578999999965 999998764 6699999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCC-------------------CCEEEeecCcchhccccccccCCCCCCCCCCcccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDAR-------------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~-------------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1170)
.||+|||++||+||||||+|||++.+ ..+||+|||++......
T Consensus 126 ~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~------------------ 187 (289)
T 1x8b_A 126 RGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSP------------------ 187 (289)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEEECCCTTCEETTCS------------------
T ss_pred HHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEEEcccccccccCCc------------------
Confidence 99999999999999999999999844 47999999999864311
Q ss_pred CcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc--CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHH
Q 001059 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH--PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642 (1170)
Q Consensus 565 ~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt--Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~ 642 (1170)
....||+.|+|||++.+...++.++|||||||++|+|++ |+...... ..... ....+......++++.+||.+
T Consensus 188 -~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~li~~ 262 (289)
T 1x8b_A 188 -QVEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQ--WHEIR--QGRLPRIPQVLSQEFTELLKV 262 (289)
T ss_dssp -CCCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSHH--HHHHH--TTCCCCCSSCCCHHHHHHHHH
T ss_pred -cccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchhH--HHHHH--cCCCCCCCcccCHHHHHHHHH
Confidence 234699999999999875567789999999999999997 33222211 11111 233444445667899999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.++++|||+....
T Consensus 263 ~l~~dp~~Rps~~~ll~h~~~~~~~ 287 (289)
T 1x8b_A 263 MIHPDPERRPSAMALVKHSVLLSAS 287 (289)
T ss_dssp HTCSSGGGSCCHHHHHTCTTC----
T ss_pred HhCCCcccCCCHHHHhhChHhhhhc
Confidence 9999999999999999999998653
|
| >2j3l_A Prolyl-tRNA synthetase; class II aminoacyl- T synthetase, editing, translation; HET: P5A; 2.3A {Enterococcus faecalis} PDB: 2j3m_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-41 Score=413.17 Aligned_cols=411 Identities=13% Similarity=0.066 Sum_probs=283.8
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++.+.+.++||+|.|++|+.++|||+.|+++
T Consensus 35 ~~~G~~~~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~~m~~~~d~~~~~~~LrP~~~~~~ 114 (572)
T 2j3l_A 35 VAAGIYSYLPLANRVLEKLKTIMREEFEKIDAVEMLMPALLPAELWKESGRYETYGPNLYRLKDRNDRDYILGPTHEETF 114 (572)
T ss_dssp EETTEEEECHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEETHHHHHHSHHHHSCTTSCEEECTTCCEEEECSCCHHHH
T ss_pred cCCCeeeeCCHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCccccchheEEEecCCCCeEEEccccHHHH
Confidence 5799999999999999999999999999999999999999 222 2235678999999999999999999999999
Q ss_pred HHHHHhC----CCCceeEEEecCeEEcCCC-CC---CCCceeEeEEEEeCCCCcccHHHH---HHHHHHHHHHcCCCcce
Q 001059 788 IRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYLQGDFDIIGGASALTEAEV---LKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~----~~~P~r~~Y~g~VfR~e~~-~~---~~~ef~Q~GvEiiG~~~~~aDaEv---i~la~~~l~~lgi~~~~ 856 (1170)
+|+++.+ +..|+|+||+|+|||+|++ +. |.|||+|+|+|+||.+...+|+|+ +.++.++|+.||+. +
T Consensus 115 ~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~~~Gl~R~ReF~q~d~~~f~~~~~~~~~e~~~~~~~~~~~~~~lgl~--~ 192 (572)
T 2j3l_A 115 TELIRDEINSYKRLPLNLYQIQTKYRDEKRSRSGLLRGREFIMKDGYSFHADEASLDQSYRDYEKAYSRIFERCGLE--F 192 (572)
T ss_dssp HHHHHHHCCBGGGCCEEEEEEEEEECCCSSCCTGGGSCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCC--E
T ss_pred HHHHHhhccChhhcCHhhheecCeeccCcCcccCccccceeEEeeeEEEcCCHHHHHHHHHHHHHHHHHHHHHcCCc--E
Confidence 9988874 2469999999999999987 34 567799999999999888899986 45899999999995 9
Q ss_pred EEEeCcHHHHHHHHH------------------HhCCCHH-----------------------------HHHHHHHHHHH
Q 001059 857 DIHLNHGDLLEAIWS------------------WAGIKAE-----------------------------HREKVAELLAM 889 (1170)
Q Consensus 857 ~i~lg~~~il~~~l~------------------~lgl~~~-----------------------------~~~~l~~~l~~ 889 (1170)
.+.+++++.+.+.+. .++.... ....+...+.
T Consensus 193 ~~~~~~~g~~g~~~s~E~~~~~~~ge~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ti~~l~~~lg- 271 (572)
T 2j3l_A 193 RAIIGDGGAMGGKDSKEFMAISEIGEDTICYSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFE- 271 (572)
T ss_dssp EEEECCGGGGTCSSEEEEEEECTTCSEEEEEESSSSCEEETTTCCCCCCCCCCCCCCCCCEEEECTTCCSHHHHHHHHT-
T ss_pred EEEecccccCCCcccEEEEEEcCCCcceEEEeCCCCcccchhhhhcccccccccccccccceecCCCCCcHHHHHHHhC-
Confidence 999999877654321 1111000 0111111111
Q ss_pred hcCCCCCcccccc----hHHHHHHHHH-HHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHH----
Q 001059 890 MGSLRPQSSEWKS----KWVVIRRQLL-QELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL---- 960 (1170)
Q Consensus 890 ~d~~~~~~~~~~~----~~~~~~~~~~-~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L---- 960 (1170)
+...... |. ..+....-++ ....+.. ..+...+. .. .+-... .+.+.++
T Consensus 272 ---~~~~~i~-K~l~~~~~~~~~~vli~gd~el~~---~kl~~~l~---~~---------~l~~a~---~~el~~~~g~~ 329 (572)
T 2j3l_A 272 ---VEPQRII-KSVLFIADEEPVMVLVRGDHDVND---VKLKNFLG---AD---------FLDEAT---EEDARRVLGAG 329 (572)
T ss_dssp ---CCGGGBE-EEEEEEETTEEEEEEEETTCCBCH---HHHHHHHT---CS---------CEEECC---HHHHHHHHSSC
T ss_pred ---cCHHHeE-EEEEEEeCCcEEEEEeeCccccCH---HHHHHhhC---CC---------ccccCC---HHHHHHhhCCC
Confidence 0000000 00 0000000000 0000111 11111110 00 000000 0111111
Q ss_pred --HHHHccC--cceEEEccCCCC--------------------CCCcccceEEEEEeccCCCcccccccceeccccccc-
Q 001059 961 --YLRIWRI--EKNIYIDALMPP--------------------IESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD- 1015 (1170)
Q Consensus 961 --~l~~~g~--~~~i~~Dl~lvr--------------------gldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD- 1015 (1170)
++..+|+ .-.+.+|.+++| |++||++++|++.....+ ...++|+ ||||
T Consensus 330 ~g~~~p~gl~~~i~~~iD~sl~r~~~~~~ga~~~~~~~~~~~~grd~~~~~~~el~~~~~G------~~~~~~g-g~~~~ 402 (572)
T 2j3l_A 330 FGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLTNVNPDRDFQPISYEDLRFVQEG------DPSPDGN-GVLAF 402 (572)
T ss_dssp TTSCCSTTCCTTCEEEEETTTTTCCSEEEECSSTTEEEEEECBTTTBCCSEEECCBCCCTT------CBCTTSS-SBEEE
T ss_pred ccccCCccCCCCCcEEEehhhhcCCceEEccCCCCceeeccccccCcCcCcHHHHHHHhcC------CcccccC-Cccee
Confidence 1112222 236899999999 789999999998754322 2345664 8887
Q ss_pred ----------hhh----hhcccccccccCCCCCCCCce-EEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcCC
Q 001059 1016 ----------YLL----HRMWDREYVGYASRTNPPSGV-GASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGG 1074 (1170)
Q Consensus 1016 ----------~L~----~~fg~~~~~~~~g~~~~~pAv-GfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~~ 1074 (1170)
+|- ++|+.. ....+++..+|++ ||+||+|||+.+|.+ +...+...+|.+|+|++.+.
T Consensus 403 ~~~ievg~~f~Lg~~ys~~~~~~--~~~~~g~~~~p~~g~~giGveRli~~l~e~~~d~~g~~~p~~~ap~~v~vi~~~~ 480 (572)
T 2j3l_A 403 TKGIEIGHIFKLGTRYSDAMGAT--VLDENGREKSVIMGCYGIGVSRLLSAIVEQNADERGINWPTGIAPFDLHVVQMNV 480 (572)
T ss_dssp EEEEEEEEEEEEETHHHHHHTCE--EECTTSCEEECEEEEEEEEHHHHHHHHHHHHEETTEECCCTTTSSCSEEEEESCT
T ss_pred ccceEEEEEeccCcccccccCCE--EECCCCcEEeeeeeccccCHHHHHHHHHHhcCcccCcccCCCcCCeEEEEEecCC
Confidence 332 344321 0111233346888 899999999988642 12233334678999999841
Q ss_pred --CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHH
Q 001059 1075 --GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLV 1152 (1170)
Q Consensus 1075 --~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~ 1152 (1170)
+....+|.++++.||+.|++|++++. ++++++++++|++.|+|++|+||++| ++|+|+||+|.+++|..+++++++
T Consensus 481 ~~~~~~~~a~~l~~~Lr~~gi~v~~d~~-~~~~g~k~~~a~~~g~p~~iivG~~e-~~~~v~vk~~~~~~q~~v~~~~l~ 558 (572)
T 2j3l_A 481 KDEYQTKLSQEVEAMMTEAGYEVLVDDR-NERAGVKFADADLIGCPIRITVGKKA-VDGVVEVKIKRTGEMLEVRKEELE 558 (572)
T ss_dssp TCHHHHHHHHHHHHHHHHTTCCEEEECS-SCCHHHHHHHHHHHCCSEEEEECGGG-GGTEEEEEETTTCCEEEEEHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhCCCeEEEeCC-CCCHhHHHHHHHhcCCCEEEEEcccc-cCCeEEEEEcCCCcEEEEeHHHHH
Confidence 34678999999999999999998876 67999999999999999999999999 999999999999999999999999
Q ss_pred HHHHHHHHh
Q 001059 1153 RFLLDAIAS 1161 (1170)
Q Consensus 1153 ~~l~~~l~~ 1161 (1170)
+.++ .++.
T Consensus 559 ~~l~-~~~~ 566 (572)
T 2j3l_A 559 STLS-ILMN 566 (572)
T ss_dssp HHHH-HHCC
T ss_pred HHHH-HHhc
Confidence 9998 7653
|
| >1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-40 Score=388.75 Aligned_cols=259 Identities=22% Similarity=0.372 Sum_probs=216.5
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+...++|++++.||+|+||+||+|.++.+|+.||+|++.... ......+.+|+.+|+.++||||++++++|.+
T Consensus 46 ~~~~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~---- 119 (387)
T 1kob_A 46 QGSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFED---- 119 (387)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC----
T ss_pred CCccccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc--hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEe----
Confidence 3455689999999999999999999999999999999997432 2344578999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+
T Consensus 120 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~ 163 (387)
T 1kob_A 120 ------------------------------------KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLK 163 (387)
T ss_dssp ------------------------------------SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 456899999996 59999887654 6999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecC--CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|||++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+ ..
T Consensus 164 ~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~ 226 (387)
T 1kob_A 164 HMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----------------IVKVTTATAEFAAPEIVDR-EP 226 (387)
T ss_dssp HHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS----------------CEEEECSSGGGCCHHHHTT-CC
T ss_pred HHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCc----------------ceeeeccCCCccCchhccC-CC
Confidence 999999999999999999974 4779999999998653211 1123479999999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++.++|||||||++|||++ ||......+....+.......+ ..+...++++.+||++||+.||.+|||+.++|+|+
T Consensus 227 ~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~hp 306 (387)
T 1kob_A 227 VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306 (387)
T ss_dssp BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTST
T ss_pred CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCc
Confidence 8999999999999999997 8877666555554444333333 34556788999999999999999999999999999
Q ss_pred CCCCch
Q 001059 662 LPPQME 667 (1170)
Q Consensus 662 ~~~~~~ 667 (1170)
|+....
T Consensus 307 ~~~~~~ 312 (387)
T 1kob_A 307 WLKGDH 312 (387)
T ss_dssp TTSSCC
T ss_pred cccCCc
Confidence 998653
|
| >3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=385.00 Aligned_cols=252 Identities=25% Similarity=0.352 Sum_probs=207.7
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-----CCCceeEEEEEee
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----HQHVVRYYQAWFE 425 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-----HpnIV~l~~~~~e 425 (1170)
....++|+++++||+|+||+||+|++..+|+.||||+++. .......+.+|+.+++.+. ||||++++++|..
T Consensus 31 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~ 107 (360)
T 3llt_A 31 MLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRN---IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMY 107 (360)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECS---CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEE
T ss_pred eEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEecc---chhhhhhhHHHHHHHHHhcccCCCCCCeecccceeeE
Confidence 3446899999999999999999999999999999999863 3344567788999999996 9999999998843
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIV 503 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~ 503 (1170)
...+|+|||||+++|.+++.... .+++..++.++.||+
T Consensus 108 ----------------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~qi~ 147 (360)
T 3llt_A 108 ----------------------------------------YDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEIL 147 (360)
T ss_dssp ----------------------------------------TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHHHHHH
T ss_pred ----------------------------------------CCeeEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 35789999999889999997654 599999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecC-------------------------CCCEEEeecCcchhccccccccCCCCCCCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDA-------------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDT 558 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~-------------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~ 558 (1170)
.||+|||++||+||||||+|||++. ++.+||+|||+|+.....
T Consensus 148 ~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~------------ 215 (360)
T 3llt_A 148 KALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDY------------ 215 (360)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEESCCCEEECCCTTCEETTSC------------
T ss_pred HHHHHHHHCCeeeCCCCcccEEEccccccccccchhcccccccccccccCCCCEEEEeccCceecCCC------------
Confidence 9999999999999999999999975 789999999999753211
Q ss_pred CCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc------
Q 001059 559 GGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW------ 629 (1170)
Q Consensus 559 ~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~------ 629 (1170)
....+||+.|+|||++.+ ..++.++|||||||++|+|++ ||......+............|...
T Consensus 216 ------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 288 (360)
T 3llt_A 216 ------HGSIINTRQYRAPEVILN-LGWDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKNMLYEATK 288 (360)
T ss_dssp ------CCSCCSCGGGCCHHHHTT-CCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHTCCCCHHHHHHHTT
T ss_pred ------CcCccCcccccCcHHHcC-CCCCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhcCCCCHHHHhhhhh
Confidence 134579999999999988 569999999999999999997 8876655544433333222222110
Q ss_pred -------------------------------------ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 630 -------------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 630 -------------------------------------~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
....+.+.+||++||+.||.+|||+.++|+||||+
T Consensus 289 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpta~elL~hp~f~ 360 (360)
T 3llt_A 289 TNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFLE 360 (360)
T ss_dssp SGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGC
T ss_pred ccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhhCCCHHHHhcCcccC
Confidence 11225677999999999999999999999999985
|
| >2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-40 Score=387.01 Aligned_cols=261 Identities=28% Similarity=0.384 Sum_probs=205.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||++++++|....
T Consensus 23 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~----- 97 (371)
T 2xrw_A 23 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK----- 97 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCC-----
T ss_pred hhhheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccc-----
Confidence 468999999999999999999999999999999999865555556678899999999999999999999884321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|+|||||+++|.+.+. ..+++..++.++.||+.||+|||++
T Consensus 98 -----------------------------~~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~ 146 (371)
T 2xrw_A 98 -----------------------------SLEEFQDVYIVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSA 146 (371)
T ss_dssp -----------------------------STTTCCEEEEEEECCSEEHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccccceEEEEEcCCCCHHHHHh--hccCHHHHHHHHHHHHHHHHHHHHC
Confidence 011245789999999999998885 4599999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++...... ..+..+||+.|+|||++.+ ..++.++||
T Consensus 147 ~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~~~Di 209 (371)
T 2xrw_A 147 GIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------MMTPYVVTRYYRAPEVILG-MGYKENVDI 209 (371)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCCCC--------------------------------CTTCCHHHHTT-CCCCTTHHH
T ss_pred CeecccCCHHHEEEcCCCCEEEEEeeccccccccc----------------ccCCceecCCccCHHHhcC-CCCCchHhH
Confidence 99999999999999999999999999998643211 1234589999999999988 568999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc---------------------------------------c
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW---------------------------------------V 630 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~---------------------------------------~ 630 (1170)
|||||++|+|++ ||...........+....+..++.+ .
T Consensus 210 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (371)
T 2xrw_A 210 WSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNK 289 (371)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccc
Confidence 999999999997 8876665554444433222111000 0
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
..++++.+||++||+.||.+|||++++|+||||...
T Consensus 290 ~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~ 325 (371)
T 2xrw_A 290 LKASQARDLLSKMLVIDASKRISVDEALQHPYINVW 325 (371)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTT
T ss_pred cccHHHHHHHHHHCcCChhhCCCHHHHhCCcchhhh
Confidence 113578999999999999999999999999998654
|
| >1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=369.77 Aligned_cols=288 Identities=43% Similarity=0.685 Sum_probs=214.7
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++.++|++.+.||+|+||.||+|++..+|+.||||+++. .......+.+|+.+++.++||||++++++|.+....
T Consensus 2 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~- 77 (303)
T 1zy4_A 2 LRYASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRH---TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNF- 77 (303)
T ss_dssp BHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEE---EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCC-
T ss_pred CcccccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEec---cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcch-
Confidence 3566889999999999999999999999999999999964 233456789999999999999999999998653100
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...........+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 78 --------------------------~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~ 131 (303)
T 1zy4_A 78 --------------------------VKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQILEALSY 131 (303)
T ss_dssp --------------------------CC------CEEEEEEEEECCCSCBHHHHHHHSCGGGCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------hhhhcccccCCceEEEEecCCCCCHHHhhhccccccchHHHHHHHHHHHHHHHH
Confidence 000011123568899999996 59999997543 58889999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++............ ...............||+.|+|||++.+...++.
T Consensus 132 LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~ 210 (303)
T 1zy4_A 132 IHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD-SQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210 (303)
T ss_dssp HHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC--------------------------CTTSCHHHHTSCSCCCT
T ss_pred HHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccc-cccccccccccccCCCcccccCcccccCCCCCcc
Confidence 999999999999999999999999999999998654221000000 0000000112345679999999999987557899
Q ss_pred cchhHHHHHHHHHhhcCCCchhHHHHHHHHhhh-cCCCCCcc-ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 589 KADMYSLGIVFFELWHPFSTAMERQIVLSDLKQ-KGELPPSW-VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 589 ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~-~~~~p~~~-~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
++|||||||++|+|++||............+.. ...+|+.+ ...++.+.++|++||+.||.+|||+.++++|||+...
T Consensus 211 ~~Di~slG~il~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~ 290 (303)
T 1zy4_A 211 KIDMYSLGIIFFEMIYPFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPVK 290 (303)
T ss_dssp HHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCCC
T ss_pred hhhHHHHHHHHHHHHhccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCCC
Confidence 999999999999999999866554444433332 23344433 3456788999999999999999999999999999876
Q ss_pred hHH
Q 001059 667 EYE 669 (1170)
Q Consensus 667 ~~~ 669 (1170)
..+
T Consensus 291 ~~~ 293 (303)
T 1zy4_A 291 HQD 293 (303)
T ss_dssp CHH
T ss_pred ChH
Confidence 543
|
| >2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=389.68 Aligned_cols=262 Identities=27% Similarity=0.415 Sum_probs=198.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||.||+|.+..+|+.||||++............+.+|+.+|+.++||||++++++|....
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~----- 101 (367)
T 2fst_X 27 VPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR----- 101 (367)
T ss_dssp EETTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS-----
T ss_pred CCCceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC-----
Confidence 347899999999999999999999999999999999765555556678999999999999999999999874321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 102 -----------------------------~~~~~~~~~lv~e~~~~~L~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~ 151 (367)
T 2fst_X 102 -----------------------------SLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSA 151 (367)
T ss_dssp -----------------------------SGGGCCCCEEEEECCCEECC------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -----------------------------ccccCCeEEEEecccCCCHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 0012345799999999899988865 5799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... .+..+||+.|+|||++.+...++.++||
T Consensus 152 givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di 213 (367)
T 2fst_X 152 DIIHRDLKPSNLAVNEDCELKILDFGLARHTADE------------------MTGYVATRWYRAPEIMLNWMHYNQTVDI 213 (367)
T ss_dssp TCCCCCCCGGGEEECTTCCEEECC---------------------------------CCCTTCCHHHHTTCCSCCTTHHH
T ss_pred CeeeCCCCHhhEEECCCCCEEEeecccccccccc------------------CCCcCcCcCccChHHHcCCcCCCchhhH
Confidence 9999999999999999999999999999864211 2346899999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-----------------------C-----CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-----------------------P-----PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-----------------------p-----~~~~~~~~e~~~LI~ 641 (1170)
|||||++|||++ ||...........+....+.. + ..+...++++.+||.
T Consensus 214 wslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~ 293 (367)
T 2fst_X 214 WSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLE 293 (367)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHH
Confidence 999999999997 787655544433332211110 1 112345678999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++|+||||.+..
T Consensus 294 ~mL~~dP~~R~t~~e~L~hp~~~~~~ 319 (367)
T 2fst_X 294 KMLVLDSDKRITAAQALAHAYFAQYH 319 (367)
T ss_dssp HHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HhCCCCcccCcCHHHHhcChhhhhcc
Confidence 99999999999999999999998753
|
| >1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=383.68 Aligned_cols=259 Identities=25% Similarity=0.348 Sum_probs=204.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh---hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL---PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~---~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..++|++.+.||+|+||.||+|+++.+|+.||||+++...... .....+.+|+.+++.++||||++++++|..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---- 83 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH---- 83 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC----
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEee----
Confidence 4578999999999999999999999999999999987543221 123468899999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+++|.+.+... ..+++..++.++.||+.||+|
T Consensus 84 ------------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~ 127 (346)
T 1ua2_A 84 ------------------------------------KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEY 127 (346)
T ss_dssp ------------------------------------TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCceEEEEEcCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHH
Confidence 3457999999999999888765 368999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++...... ...+..+||+.|+|||++.+...++.
T Consensus 128 lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~~~~~~~ 192 (346)
T 1ua2_A 128 LHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---------------RAYTHQVVTRWYRAPELLFGARMYGV 192 (346)
T ss_dssp HHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC---------------CCCCCSCCCCTTCCHHHHTTCSCCCH
T ss_pred HHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCc---------------ccCCcccccccccCchHhhCCCCCCc
Confidence 999999999999999999999999999999998653211 11234579999999999987556899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-------------------------ccccCCHHHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-------------------------SWVAKFSEQESLL 640 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-------------------------~~~~~~~e~~~LI 640 (1170)
++|||||||++|||++ ||......+....+....+..+. .+...++++.+||
T Consensus 193 ~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 272 (346)
T 1ua2_A 193 GVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLI 272 (346)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHH
T ss_pred hhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHH
Confidence 9999999999999997 66555554444444332211110 1134467899999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
++||+.||.+|||+.++|+|+||...
T Consensus 273 ~~~L~~dP~~Rpt~~ell~h~~f~~~ 298 (346)
T 1ua2_A 273 QGLFLFNPCARITATQALKMKYFSNR 298 (346)
T ss_dssp HHHHCSSTTTSCCHHHHHTSGGGTSS
T ss_pred HHHhccChhhCCCHHHHhcChhhhcC
Confidence 99999999999999999999999765
|
| >4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-40 Score=381.91 Aligned_cols=260 Identities=25% Similarity=0.410 Sum_probs=211.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+++|++++.||+|+||.||+|++..+|+.||||++............+.+|+.+++.++||||++++++|.+
T Consensus 23 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------- 95 (331)
T 4aaa_A 23 SMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKK------- 95 (331)
T ss_dssp CGGGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hhhhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeec-------
Confidence 3689999999999999999999999999999999997666655566778899999999999999999998743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 96 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 142 (331)
T 4aaa_A 96 ---------------------------------KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHS 142 (331)
T ss_dssp ---------------------------------TTEEEEEEECCSEEHHHHHHHSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEecCCcchHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999986 566666666789999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++....... ......||+.|+|||++.+...++.++|
T Consensus 143 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------~~~~~~~t~~y~aPE~~~~~~~~~~~~D 207 (331)
T 4aaa_A 143 HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE---------------VYDDEVATRWYRAPELLVGDVKYGKAVD 207 (331)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECCCTTC---------------------------CCCCCTTCCHHHHTTCTTCCTHHH
T ss_pred CCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc---------------ccCCCcCCccccCcccccCCCCcchHHH
Confidence 9999999999999999999999999999986532210 1234579999999999987557899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC----------------------------ccccCCHHHHHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP----------------------------SWVAKFSEQESLL 640 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~----------------------------~~~~~~~e~~~LI 640 (1170)
||||||++|+|++ ||......+.........+..++ .+...++.+.+||
T Consensus 208 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 287 (331)
T 4aaa_A 208 VWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLA 287 (331)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHH
Confidence 9999999999997 78766554444333222111110 1224577899999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+||+.||.+|||+.++|+||||+...
T Consensus 288 ~~~L~~dP~~Rpt~~ell~hp~f~~~~ 314 (331)
T 4aaa_A 288 KKCLHIDPDKRPFCAELLHHDFFQMDG 314 (331)
T ss_dssp HHHTCSSGGGSCCGGGGGGSHHHHGGG
T ss_pred HHHhccCcccCCCHHHHhcCchhccCC
Confidence 999999999999999999999998764
|
| >3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-40 Score=382.29 Aligned_cols=259 Identities=25% Similarity=0.372 Sum_probs=205.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC--CCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH--QHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H--pnIV~l~~~~~e~~~~~~ 431 (1170)
-+.|++++.||+|+||+||+|.+. +++.||||++............+.+|+.+|+.++| |||+++++++..
T Consensus 8 ~~~y~i~~~lG~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~------ 80 (343)
T 3dbq_A 8 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------ 80 (343)
T ss_dssp SCEEEEEEEESCCSSEEEEEEECT-TSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC------
T ss_pred cCEEEEEEEEecCCCeEEEEEEeC-CCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEee------
Confidence 357999999999999999999985 79999999998776666666789999999999977 999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||+++++|.+++.....+++.+++.++.||+.||+|||+
T Consensus 81 ----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~ 126 (343)
T 3dbq_A 81 ----------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126 (343)
T ss_dssp ----------------------------------SSEEEEEECCCSEEHHHHHHHSCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEeCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4578999998888999999998899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC---------
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--------- 582 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--------- 582 (1170)
+||+||||||+|||++ ++.+||+|||+++....... .......+||+.|+|||++.+
T Consensus 127 ~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 192 (343)
T 3dbq_A 127 HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGK 192 (343)
T ss_dssp TTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC-------------------------CCCCSSCCHHHHHHCC-------
T ss_pred CCeecCCCCcceEEEE-CCcEEEeecccccccCcccc-------------cccCCCCcCCcCcCCHHHHhhccccccccc
Confidence 9999999999999997 68899999999986532210 111235689999999999863
Q ss_pred -CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 -WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 -~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
...++.++|||||||++|||++ ||..........................++++.+||.+||+.||.+|||+.++|
T Consensus 193 ~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l 272 (343)
T 3dbq_A 193 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272 (343)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred cccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhcCCcccCCcccCCHHHHHHHHHHcCCChhHCCCHHHHH
Confidence 2458899999999999999997 776543332222222212222222233456899999999999999999999999
Q ss_pred hccCCCCch
Q 001059 659 QDALPPQME 667 (1170)
Q Consensus 659 ~~~~~~~~~ 667 (1170)
+|||+....
T Consensus 273 ~hp~~~~~~ 281 (343)
T 3dbq_A 273 AHPYVQIQT 281 (343)
T ss_dssp TSHHHHSCC
T ss_pred hCccccccC
Confidence 999986543
|
| >3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-40 Score=402.05 Aligned_cols=258 Identities=30% Similarity=0.550 Sum_probs=220.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..+.++|++.+.||+|+||+||+|+++.+|+.||||++...... ......+.+|+.+|++++||||++++++|.+
T Consensus 22 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 97 (484)
T 3nyv_A 22 AIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFED---- 97 (484)
T ss_dssp CCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred CcccCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEe----
Confidence 44567899999999999999999999999999999999765432 3345779999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||. ++|.+.+.....+++..++.++.||+.||+|
T Consensus 98 ------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~ 141 (484)
T 3nyv_A 98 ------------------------------------KGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITY 141 (484)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHTCSCCBHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++||+||||||+|||+ +.++.+||+|||+|+...... .....+||+.|+|||++.+ .
T Consensus 142 lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~--~ 203 (484)
T 3nyv_A 142 MHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASK----------------KMKDKIGTAYYIAPEVLHG--T 203 (484)
T ss_dssp HHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCC----------------SHHHHTTGGGTCCHHHHHT--C
T ss_pred HHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEccccc----------------ccccCCCCccccCceeecC--C
Confidence 999999999999999999 467899999999998753221 1234579999999999987 5
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
|+.++|||||||++|+|++ ||......+....+.......+ +.+...++++++||++||+.||.+|||+.++|+||
T Consensus 204 ~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~h~ 283 (484)
T 3nyv_A 204 YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHE 283 (484)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSH
T ss_pred CCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhhCh
Confidence 8999999999999999997 8887777666665555444433 46678889999999999999999999999999999
Q ss_pred CCCCc
Q 001059 662 LPPQM 666 (1170)
Q Consensus 662 ~~~~~ 666 (1170)
|+...
T Consensus 284 ~~~~~ 288 (484)
T 3nyv_A 284 WIQTY 288 (484)
T ss_dssp HHHHH
T ss_pred hhccc
Confidence 88644
|
| >3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-40 Score=372.53 Aligned_cols=257 Identities=23% Similarity=0.361 Sum_probs=195.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|++..+|+.||||+++...........+.++...++.++||||+++++++.+
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~-------- 77 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR-------- 77 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--------
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeec--------
Confidence 478999999999999999999999999999999997554443344445556666888899999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES----YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+++|.+++.. ...+++..++.++.||+.||+||
T Consensus 78 --------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 125 (290)
T 3fme_A 78 --------------------------------EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125 (290)
T ss_dssp --------------------------------SSSEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------cCCEEEEEehhccchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999999988777653 46799999999999999999999
Q ss_pred HhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc---CCCC
Q 001059 510 HGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ---GWPK 585 (1170)
Q Consensus 510 Hs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~---~~~~ 585 (1170)
|++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++. ....
T Consensus 126 H~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~ 189 (290)
T 3fme_A 126 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV----------------AKDIDAGCKPYMAPERINPELNQKG 189 (290)
T ss_dssp HHHSCCCCCCCSGGGCEECTTCCEEBCCC-------------------------------CCCCCCSCHHHHSCCTTC--
T ss_pred hhcCCeecCCCCHHHEEECCCCCEEEeecCCcccccccc----------------cccccCCCccccChhhcChhhcCcC
Confidence 998 99999999999999999999999999998653221 112347999999999973 2256
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
++.++|||||||++|+|++ ||..........................++++.+||.+||+.||.+|||+.++++|||
T Consensus 190 ~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~ 269 (290)
T 3fme_A 190 YSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269 (290)
T ss_dssp CCHHHHHHHHHHHHHHHHHTSCSSCCCSCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHH
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCccccCchHHHHHHHhccCCCCcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcc
Confidence 8999999999999999996 7765332222222222233222233456789999999999999999999999999999
Q ss_pred CCCc
Q 001059 663 PPQM 666 (1170)
Q Consensus 663 ~~~~ 666 (1170)
|...
T Consensus 270 f~~~ 273 (290)
T 3fme_A 270 FTLH 273 (290)
T ss_dssp HHHH
T ss_pred cccC
Confidence 8654
|
| >2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-40 Score=375.19 Aligned_cols=252 Identities=24% Similarity=0.422 Sum_probs=209.8
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
.|+..+.||+|+||.||+|+++.+|+.||||++...... ..+.+.+|+.+++.++||||++++++|..
T Consensus 46 ~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~---------- 113 (321)
T 2c30_A 46 LLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHFNVVEMYKSYLV---------- 113 (321)
T ss_dssp HEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCC--SHHHHHHHHHHHTTCCCTTBCCEEEEEEE----------
T ss_pred hhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchh--HHHHHHHHHHHHHhCCCCCcceEEEEEEE----------
Confidence 477888999999999999999999999999999754432 35678899999999999999999998843
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+|+||||++ ++|.+++.. ..+++..++.++.||+.||+|||++||
T Consensus 114 ------------------------------~~~~~lv~e~~~~~~L~~~l~~-~~l~~~~~~~i~~qi~~~L~~LH~~~i 162 (321)
T 2c30_A 114 ------------------------------GEELWVLMEFLQGGALTDIVSQ-VRLNEEQIATVCEAVLQALAYLHAQGV 162 (321)
T ss_dssp ------------------------------TTEEEEEECCCCSCBHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ------------------------------CCEEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 346899999996 588888764 569999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+|||++.++.+||+|||+++...... ......+||+.|+|||++.+ ..++.++||||
T Consensus 163 vH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~Dv~s 226 (321)
T 2c30_A 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV---------------PKRKSLVGTPYWMAPEVISR-SLYATEVDIWS 226 (321)
T ss_dssp ECCCCSGGGEEECTTCCEEECCCTTCEECCSSS---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHHHHH
T ss_pred ecCCCCHHHEEECCCCcEEEeeeeeeeecccCc---------------cccccccCCccccCHhhhcC-CCCCchhhHHH
Confidence 999999999999999999999999998653211 01234579999999999987 56899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||++|||++ ||......+...................++++.+||.+||+.||.+|||+.++++|||+.+.
T Consensus 227 lG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~ 301 (321)
T 2c30_A 227 LGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQT 301 (321)
T ss_dssp HHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGC
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcChhhccC
Confidence 9999999997 77766555444333332222223345677899999999999999999999999999999765
|
| >2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-40 Score=368.34 Aligned_cols=261 Identities=28% Similarity=0.475 Sum_probs=216.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+.++|++.+.||+|+||.||+|.++.+|+.||||++...... ...+.+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 76 (276)
T 2yex_A 5 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAV-DCPENIKKEICINKMLNHENVVKFYGHRRE------- 76 (276)
T ss_dssp HHHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCT-THHHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred eecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccch-hhhHHHHHHHHHHHhcCCCCceeeeeEEEc-------
Confidence 467899999999999999999999999999999999754432 345678999999999999999999998733
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|+||||+++ +|.+++.....+++..++.++.||+.||+|||+
T Consensus 77 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~ 123 (276)
T 2yex_A 77 ---------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123 (276)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEecCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 3567999999975 999998877789999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+||+++.++.+||+|||++......... .......||+.|+|||++.+...++.++|
T Consensus 124 ~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~D 190 (276)
T 2yex_A 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE-------------RLLNKMCGTLPYVAPELLKRREFHAEPVD 190 (276)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-------------CCBCCCCSCGGGCCGGGGTCSSBCHHHHH
T ss_pred CCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch-------------hcccCCccccCccChHHHhcCCCCCCcch
Confidence 99999999999999999999999999999865322100 11234579999999999987444578999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||||||++|+|++ ||....................+.+...++.+.+||.+||+.||.+|||+.++++|+||.+..
T Consensus 191 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~ 269 (276)
T 2yex_A 191 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL 269 (276)
T ss_dssp HHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChh
Confidence 9999999999996 776544332222333333333344567788999999999999999999999999999998764
|
| >2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-40 Score=388.31 Aligned_cols=258 Identities=25% Similarity=0.378 Sum_probs=206.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc--CCCceeEEEEEeecCccccC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~--HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.+|++++.||+|+||+||+|.+. +|+.||||++............+.+|+.+|+.++ ||||+++++++..
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~-~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~------- 127 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------- 127 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-------
T ss_pred CceEEEEEEccCCCeEEEEEEcC-CCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEec-------
Confidence 46999999999999999999987 4999999999876666666778999999999996 5999999988743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||+++++|.+++.....+++.+++.++.||+.||+|||++
T Consensus 128 ---------------------------------~~~~~lv~E~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~ 174 (390)
T 2zmd_A 128 ---------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQH 174 (390)
T ss_dssp ---------------------------------SSEEEEEEECCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred ---------------------------------CCEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 35689999977789999999888999999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC---------
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--------- 583 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--------- 583 (1170)
||+||||||+|||++ ++.+||+|||+++.+..... .......+||+.|+|||++.+.
T Consensus 175 ~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 240 (390)
T 2zmd_A 175 GIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGAVNYMPPEAIKDMSSSRENGKS 240 (390)
T ss_dssp TCCCCCCCGGGEEES-SSCEEECCCSSSCCC----------------------CCSCCCGGGCCHHHHHCC---------
T ss_pred CeeecCCCHHHEEEE-CCeEEEEecCccccccCCCc-------------cccCCCCCcCCCccChHHhhhcccccccccc
Confidence 999999999999995 68999999999986532210 1112346899999999998752
Q ss_pred -CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 -PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 -~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..++.++|||||||++|||++ ||............+.......+.....++++.+||++||+.||.+|||+.++|+
T Consensus 241 ~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 320 (390)
T 2zmd_A 241 KSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLA 320 (390)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred ccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhCccccCCCCccchHHHHHHHHHHcccChhhCCCHHHHhh
Confidence 358999999999999999997 7865433322222222111111122233578999999999999999999999999
Q ss_pred ccCCCCch
Q 001059 660 DALPPQME 667 (1170)
Q Consensus 660 ~~~~~~~~ 667 (1170)
|||+....
T Consensus 321 hp~~~~~~ 328 (390)
T 2zmd_A 321 HPYVQIQT 328 (390)
T ss_dssp SHHHHSCC
T ss_pred CcCccccC
Confidence 99986554
|
| >3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-40 Score=390.26 Aligned_cols=258 Identities=22% Similarity=0.316 Sum_probs=208.9
Q ss_pred CCCccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc------cCCCceeEEE
Q 001059 348 LPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL------QHQHVVRYYQ 421 (1170)
Q Consensus 348 ~~~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l------~HpnIV~l~~ 421 (1170)
.+......+|++++.||+|+||+||+|.+..+|+.||||+++. .......+.+|+.+++.+ +||||+++++
T Consensus 90 ~~~~~~~~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~ 166 (429)
T 3kvw_A 90 VPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRN---EKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLE 166 (429)
T ss_dssp CTTCEETTTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEE
T ss_pred cCCCcccCcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECC---ccchHHHHHHHHHHHHHHhhccccCCcCEEEEEe
Confidence 3445566789999999999999999999999999999999963 234456788899998888 5779999998
Q ss_pred EEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHH
Q 001059 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLF 499 (1170)
Q Consensus 422 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~ 499 (1170)
+|.. ...+|+|||||+++|.+++.... .+++..++.++
T Consensus 167 ~~~~----------------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~ 206 (429)
T 3kvw_A 167 NFTF----------------------------------------RNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFA 206 (429)
T ss_dssp EEEE----------------------------------------TTEEEEEECCCCCBHHHHHHHTTTCCCCHHHHHHHH
T ss_pred eccc----------------------------------------CCeEEEEEeccCCCHHHHHHhccCCCCCHHHHHHHH
Confidence 8733 35789999999999999987654 49999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeecCCCC--EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~--vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
.||+.||+|||++||+||||||+|||++.++. +||+|||+|+.... .....+||+.|+||
T Consensus 207 ~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~------------------~~~~~~gt~~y~aP 268 (429)
T 3kvw_A 207 HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQ------------------RVYTYIQSRFYRAP 268 (429)
T ss_dssp HHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTC------------------CCCSSCSCGGGCCH
T ss_pred HHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCC------------------cccccCCCCCccCh
Confidence 99999999999999999999999999999887 99999999975321 12345899999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc-------------------------
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW------------------------- 629 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~------------------------- 629 (1170)
|++.+ ..++.++|||||||++|||++ ||......+....+....+..+..+
T Consensus 269 E~~~~-~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (429)
T 3kvw_A 269 EVILG-ARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDASKRAKNFVSSKGYPRYCTVTTL 347 (429)
T ss_dssp HHHHT-BCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTBTTHHHHBCTTSCBTTSCEECC
T ss_pred HHHhC-CCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHhhhhhhhccCCCCCccccccccc
Confidence 99988 568999999999999999997 7766655544433332211111100
Q ss_pred -------------------------------ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 630 -------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 630 -------------------------------~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...++++.+||++||+.||.+|||+.++|+||||.+..
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e~L~Hpw~~~~~ 416 (429)
T 3kvw_A 348 SDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPWLRRRL 416 (429)
T ss_dssp CC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTTC---
T ss_pred ccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHHHhCChhhccCC
Confidence 01256789999999999999999999999999998754
|
| >3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-40 Score=366.93 Aligned_cols=254 Identities=26% Similarity=0.446 Sum_probs=215.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|.++.++..||+|++...... ..+.+.+|+.+++.++||||++++++|.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~--~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------ 77 (277)
T 3f3z_A 6 DINQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVE--DVDRFKQEIEIMKSLDHPNIIRLYETFED------ 77 (277)
T ss_dssp CHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccc--hHHHHHHHHHHHHhCCCCCEeeEEEEEec------
Confidence 3457899999999999999999999999999999999754332 35678999999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.||+|||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 123 (277)
T 3f3z_A 78 ----------------------------------NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCH 123 (277)
T ss_dssp ----------------------------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEeccCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456899999996 599999988888999999999999999999999
Q ss_pred hCCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 511 GQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
++||+||||||+|||+ +.++.+||+|||++....... ......||+.|+|||++.+ .++
T Consensus 124 ~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~--~~~ 185 (277)
T 3f3z_A 124 KLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGK----------------MMRTKVGTPYYVSPQVLEG--LYG 185 (277)
T ss_dssp HTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTS----------------CBCCCCSCTTTCCHHHHTT--CBC
T ss_pred HCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCcc----------------chhccCCCCCccChHHhcc--cCC
Confidence 9999999999999999 778899999999997653211 1234579999999999976 489
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++|||||||++|+|++ ||......+............+. .+...++++.+||.+||+.||.+|||+.++|+|+||
T Consensus 186 ~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~h~~~ 265 (277)
T 3f3z_A 186 PECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265 (277)
T ss_dssp TTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHH
T ss_pred chhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhcCHHH
Confidence 99999999999999996 88776666655555544444433 344678899999999999999999999999999987
Q ss_pred CC
Q 001059 664 PQ 665 (1170)
Q Consensus 664 ~~ 665 (1170)
.+
T Consensus 266 ~~ 267 (277)
T 3f3z_A 266 EK 267 (277)
T ss_dssp HH
T ss_pred hc
Confidence 54
|
| >2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-40 Score=400.16 Aligned_cols=257 Identities=26% Similarity=0.409 Sum_probs=215.6
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
....++|.+.+.||+|+||+||+|++..+|+.||||+++.... .......+.+|+.+|+.++||||+++++++..
T Consensus 12 ~~~~~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~---- 87 (476)
T 2y94_A 12 RVKIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVIST---- 87 (476)
T ss_dssp CCEETTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEEC----
T ss_pred CceecCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE----
Confidence 3456899999999999999999999999999999999975321 11234678999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ ++|.+++...+.+++..++.++.||+.||+|
T Consensus 88 ------------------------------------~~~~~lv~E~~~gg~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~ 131 (476)
T 2y94_A 88 ------------------------------------PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDY 131 (476)
T ss_dssp ------------------------------------SSEEEEEEECCSSEEHHHHTTSSSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+...++.
T Consensus 132 LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~ 195 (476)
T 2y94_A 132 CHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------FLRTSCGSPNYAAPEVISGRLYAGP 195 (476)
T ss_dssp HHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC----------------CBCCCCSCSTTCCHHHHTTCCBCSH
T ss_pred HHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc----------------cccccCCCcCeEChhhccCCCCCCC
Confidence 999999999999999999999999999999998653211 1234589999999999998544578
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|+|++ ||...........+.......| ...++++.+||++||+.||.+|||+.++++|||+.+
T Consensus 196 ~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~ 272 (476)
T 2y94_A 196 EVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP---QYLNPSVISLLKHMLQVDPMKRATIKDIREHEWFKQ 272 (476)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC---TTCCHHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHT
T ss_pred cceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC---ccCCHHHHHHHHHHcCCCchhCcCHHHHHhCHHhhh
Confidence 9999999999999997 8876655555544444333333 345679999999999999999999999999999865
Q ss_pred c
Q 001059 666 M 666 (1170)
Q Consensus 666 ~ 666 (1170)
.
T Consensus 273 ~ 273 (476)
T 2y94_A 273 D 273 (476)
T ss_dssp T
T ss_pred c
Confidence 3
|
| >3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-40 Score=377.70 Aligned_cols=265 Identities=26% Similarity=0.412 Sum_probs=211.3
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.+.+.++|++.+.||+|+||+||+|++..+|+.||||+++.... .......+.+|+.+++.++||||+++++++....
T Consensus 7 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~- 85 (311)
T 3ork_A 7 PSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET- 85 (311)
T ss_dssp CSEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEE-
T ss_pred cceecCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccC-
Confidence 34567899999999999999999999999999999999976543 3344567899999999999999999999875431
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
.....+|+|||||+ ++|.+++...+.+++..++.++.||+.||+
T Consensus 86 -----------------------------------~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~ 130 (311)
T 3ork_A 86 -----------------------------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALN 130 (311)
T ss_dssp -----------------------------------TTEEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCcccEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 11346799999996 599999998889999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++.+...... .......+||+.|+|||++.+ ..++
T Consensus 131 ~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~-~~~~ 197 (311)
T 3ork_A 131 FSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNS------------VTQTAAVIGTAQYLSPEQARG-DSVD 197 (311)
T ss_dssp HHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC------------------------------CCTTCCHHHHHT-CCCC
T ss_pred HHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCcccccccccc------------cccccccCcCcccCCHHHhcC-CCCC
Confidence 999999999999999999999999999999999865422100 111234579999999999988 5789
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++|||||||++|||++ ||...................+. .....++++.+||.+||+.||.+||++.++++|+|+
T Consensus 198 ~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 277 (311)
T 3ork_A 198 ARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLV 277 (311)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred chHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHH
Confidence 99999999999999997 88777666655555443322221 234567899999999999999999999999998754
|
| >4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=383.70 Aligned_cols=261 Identities=25% Similarity=0.391 Sum_probs=211.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|.+.+.||+|+||+||+|.++.+|+.||||++............+.+|+.+++.++||||++++++|...+.
T Consensus 40 l~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~---- 115 (371)
T 4exu_A 40 LPKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS---- 115 (371)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS----
T ss_pred ccccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCC----
Confidence 4579999999999999999999999999999999998665555566789999999999999999999998843210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
......+|+||||++++|.+.+. ..+++..++.++.||+.||+|||++
T Consensus 116 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~ 163 (371)
T 4exu_A 116 ------------------------------LRNFYDFYLVMPFMQTDLQKIMG--MEFSEEKIQYLVYQMLKGLKYIHSA 163 (371)
T ss_dssp ------------------------------STTCCCCEEEEECCCEEHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cccceeEEEEEccccccHHHHhh--cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 01123458999999999988874 3499999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++..... ....+||+.|+|||++.+...++.++||
T Consensus 164 ~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di 225 (371)
T 4exu_A 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------MTGYVVTRWYRAPEVILSWMHYNQTVDI 225 (371)
T ss_dssp TCCCSCCCGGGEEECTTCCEEECSTTCC--------------------------CTTCCCTTSCHHHHSCCSCCCTTHHH
T ss_pred CCcCCCcCHHHeEECCCCCEEEEecCcccccccC------------------cCCcccCccccCHHHhcCCCCCCcHHhH
Confidence 9999999999999999999999999999854311 2345789999999999875678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~ 641 (1170)
|||||++|+|++ ||......+....+....+..+ ..+...++++.+||+
T Consensus 226 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~ 305 (371)
T 4exu_A 226 WSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLE 305 (371)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHH
Confidence 999999999997 8876655544444332221111 112345789999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||+.||.+|||+.++|+||||....
T Consensus 306 ~~L~~dP~~Rpt~~ell~hp~f~~~~ 331 (371)
T 4exu_A 306 KMLELDVDKRLTAAQALTHPFFEPFR 331 (371)
T ss_dssp HHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred HHCCCChhhcCCHHHHhcCcccccCC
Confidence 99999999999999999999998653
|
| >3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-40 Score=381.70 Aligned_cols=263 Identities=24% Similarity=0.353 Sum_probs=211.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||.||+|++..+|+.||||++... ........+.+|+.+|++++||||+++++++....
T Consensus 27 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~------- 98 (364)
T 3qyz_A 27 PRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPF-EHQTYCQRTLREIKILLRFRHENIIGINDIIRAPT------- 98 (364)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCT-TCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS-------
T ss_pred ccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccc-cCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCC-------
Confidence 5899999999999999999999999999999999743 33445578899999999999999999998874321
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++||
T Consensus 99 ----------------------------~~~~~~~~iv~e~~~~~L~~~l~~-~~~~~~~~~~i~~qi~~aL~~LH~~~i 149 (364)
T 3qyz_A 99 ----------------------------IEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 149 (364)
T ss_dssp ----------------------------TTTCCCEEEEEECCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------------------------ccccceEEEEEcccCcCHHHHHHh-CCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence 012356899999999999998865 469999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+|||++.++.+||+|||+++........ .......+||+.|+|||++.+...++.++||||
T Consensus 150 vH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diws 217 (364)
T 3qyz_A 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH------------TGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 217 (364)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB------------CCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHH
T ss_pred ecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc------------cccccccccccCCCCCHHhcCCCCCCcchhHHH
Confidence 99999999999999999999999999865432110 011244589999999998776566899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHHHc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~~~ 643 (1170)
|||++|+|++ ||......+....+....+..+ ..+...++++.+||.+|
T Consensus 218 lG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 297 (364)
T 3qyz_A 218 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297 (364)
T ss_dssp HHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999997 7765443333222221111110 11234577899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCc
Q 001059 644 MSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|+.||.+|||+.++|+||||.+.
T Consensus 298 L~~dP~~R~t~~e~l~hp~~~~~ 320 (364)
T 3qyz_A 298 LTFNPHKRIEVEQALAHPYLEQY 320 (364)
T ss_dssp TCSSTTTSCCHHHHHTSGGGTTT
T ss_pred cCCChhhCCCHHHHhcCcchhhc
Confidence 99999999999999999999875
|
| >1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=366.48 Aligned_cols=264 Identities=24% Similarity=0.412 Sum_probs=217.5
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-------hhhHHHHHHHHHHHHhcc-CCCceeEEEE
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-------LPVNDRILREVATLSRLQ-HQHVVRYYQA 422 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-------~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~ 422 (1170)
..+.++|++.+.||+|+||.||+|.++.+|+.||||+++..... ....+.+.+|+.+++++. ||||++++++
T Consensus 13 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~ 92 (298)
T 1phk_A 13 HGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDT 92 (298)
T ss_dssp --CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEE
T ss_pred cchhhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeee
Confidence 45678999999999999999999999999999999999765421 123456889999999995 9999999998
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQ 501 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~q 501 (1170)
+.. ...+|+||||++ ++|.+++.....+++..++.++.|
T Consensus 93 ~~~----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~q 132 (298)
T 1phk_A 93 YET----------------------------------------NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132 (298)
T ss_dssp EEC----------------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHH
T ss_pred ecc----------------------------------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHH
Confidence 732 457899999997 599999998888999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+.||+|||++||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.
T Consensus 133 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~ 196 (298)
T 1phk_A 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------KLREVCGTPSYLAPEIIE 196 (298)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHH
T ss_pred HHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCc----------------ccccccCCccccCHHHhc
Confidence 9999999999999999999999999999999999999998653211 123457999999999985
Q ss_pred -----CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCC
Q 001059 582 -----GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 582 -----~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
....++.++||||||+++|+|++ ||...................+ +.+...++++.+||.+||+.||.+||
T Consensus 197 ~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 276 (298)
T 1phk_A 197 CSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRY 276 (298)
T ss_dssp HHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSC
T ss_pred cccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCC
Confidence 22458899999999999999997 7776655554444444333333 34567788999999999999999999
Q ss_pred CHHHHHhccCCCCchHHH
Q 001059 653 SATELLQDALPPQMEYEL 670 (1170)
Q Consensus 653 ta~eiL~~~~~~~~~~~~ 670 (1170)
|+.++++||||.+...+.
T Consensus 277 s~~~ll~h~~~~~~~~~~ 294 (298)
T 1phk_A 277 TAEEALAHPFFQQYVVEE 294 (298)
T ss_dssp CHHHHTTSGGGCTTC---
T ss_pred CHHHHHhChHhhhccchh
Confidence 999999999999876543
|
| >1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-40 Score=380.97 Aligned_cols=252 Identities=25% Similarity=0.405 Sum_probs=209.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|+.++.||+|+||+||+|++..+|+.||||++...... ....+.+.+|+.+|+.++||||++++++|..
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 125 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR-------- 125 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE--------
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--------
Confidence 4599999999999999999999999999999999765432 3344678999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+|+|.+.+.. ...+++..++.++.||+.||+|||++
T Consensus 126 --------------------------------~~~~~lv~e~~~g~l~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH~~ 173 (348)
T 1u5q_A 126 --------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSH 173 (348)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCeEEEEEecCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 356899999999999888864 56799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ks 590 (1170)
||+||||||+|||++.++.+||+|||+++.... ....+||+.|+|||++.+ ...++.++
T Consensus 174 ~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~-------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~ 234 (348)
T 1u5q_A 174 NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKV 234 (348)
T ss_dssp TCBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-------------------BCCCCSCGGGCCHHHHHTTSSCCBCTHH
T ss_pred CeeeCCCCHHHEEECCCCCEEEeeccCceecCC-------------------CCcccCCcceeCHhhhccccCCCCCcHH
Confidence 999999999999999999999999999975421 134579999999999853 24689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|||||||++|||++ ||.............. ....+......++.+.+||.+||+.||.+|||+.++++|+|+...
T Consensus 235 DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~ 312 (348)
T 1u5q_A 235 DVWSLGITCIELAERKPPLFNMNAMSALYHIAQ-NESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 312 (348)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhcc
Confidence 99999999999997 7766555444443333 222222234567789999999999999999999999999987543
|
| >3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-40 Score=380.64 Aligned_cols=255 Identities=25% Similarity=0.457 Sum_probs=192.0
Q ss_pred ccccCCceEE---eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeec
Q 001059 351 SRYLNDFEEL---QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFET 426 (1170)
Q Consensus 351 ~~~~~~y~~~---~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~ 426 (1170)
+.+.++|++. +.||+|+||+||+|.++.+|+.||||++... ....+.+|+.+++.+. ||||++++++|.+
T Consensus 4 ~~f~~~y~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~- 77 (325)
T 3kn6_A 4 SPFYQHYDLDLKDKPLGEGSFSICRKCVHKKSNQAFAVKIISKR-----MEANTQKEITALKLCEGHPNIVKLHEVFHD- 77 (325)
T ss_dssp CHHHHHEEECTTSCCSEEETTEEEEEEEETTTCCEEEEEEEEGG-----GHHHHHHHHHHHHHTTTCTTBCCEEEEEEC-
T ss_pred CcchhccccccCCCccccCCCeEEEEEEECCCCCEEEEEEEChh-----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEc-
Confidence 3455677775 7899999999999999999999999999642 3456889999999997 9999999998832
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+ ++|.+++.....+++.+++.++.||+.|
T Consensus 78 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~ 118 (325)
T 3kn6_A 78 ---------------------------------------QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSA 118 (325)
T ss_dssp ---------------------------------------SSEEEEEECCCCSCBHHHHHHHCSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCEEEEEEEccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 457899999996 5999999988899999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|+|||++||+||||||+|||++.++ .+||+|||+++...... ......+||+.|+|||++.+
T Consensus 119 l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~~t~~y~aPE~~~~ 183 (325)
T 3kn6_A 119 VSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDN---------------QPLKTPCFTLHYAAPELLNQ 183 (325)
T ss_dssp HHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------------------------------
T ss_pred HHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCC---------------CcccccCCCcCccCHHHhcC
Confidence 9999999999999999999998765 79999999998543211 11234578999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhH-------HHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCC
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAME-------RQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~-------~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
..++.++|||||||++|+|++ ||..... .+....+.......+ +.+...++++.+||.+||+.||.+|
T Consensus 184 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R 262 (325)
T 3kn6_A 184 -NGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKR 262 (325)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTC
T ss_pred -CCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHC
Confidence 568999999999999999997 7765332 222233332222233 2445678899999999999999999
Q ss_pred CCHHHHHhccCCCCc
Q 001059 652 PSATELLQDALPPQM 666 (1170)
Q Consensus 652 Pta~eiL~~~~~~~~ 666 (1170)
||+.++++|+|+...
T Consensus 263 pt~~ell~h~w~~~~ 277 (325)
T 3kn6_A 263 LKMSGLRYNEWLQDG 277 (325)
T ss_dssp CCTTTSTTCGGGCTT
T ss_pred CCHHHHhcChhhccC
Confidence 999999999999764
|
| >3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-40 Score=368.55 Aligned_cols=253 Identities=28% Similarity=0.488 Sum_probs=210.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
..+++|++.+.||+|+||+||+|.+..++..||||++..... .......+.+|+.+++.++||||++++++|.+
T Consensus 6 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 80 (279)
T 3fdn_A 6 WALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD----- 80 (279)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-----
T ss_pred eecccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEec-----
Confidence 346899999999999999999999999999999999864321 11234568899999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+||||++ ++|.+.+.....+++..++.++.||+.||+||
T Consensus 81 -----------------------------------~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~qi~~~l~~L 125 (279)
T 3fdn_A 81 -----------------------------------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYC 125 (279)
T ss_dssp -----------------------------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999997 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.+
T Consensus 126 H~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~ 187 (279)
T 3fdn_A 126 HSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTDLCGTLDYLPPEMIEG-RMHDEK 187 (279)
T ss_dssp HTTTCEECCCCGGGEEECTTSCEEECSCCEESCC-------------------------CCCCTTCCHHHHTT-CCCCTT
T ss_pred HhCCEecccCChHhEEEcCCCCEEEEeccccccCCcc-----------------cccccCCCCCccCHhHhcc-CCCCcc
Confidence 9999999999999999999999999999998643211 1234579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
+||||||+++|+|++ ||......+............|. ..++++.+||.+||+.||.+|||+.++++|||+..
T Consensus 188 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~ 263 (279)
T 3fdn_A 188 VDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 263 (279)
T ss_dssp HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHCCSSGGGSCCHHHHHHCHHHHH
T ss_pred chhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCCC---cCCHHHHHHHHHHhccChhhCCCHHHHhhCccccC
Confidence 999999999999996 77766555554444433333333 35678999999999999999999999999998754
|
| >2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-40 Score=374.20 Aligned_cols=268 Identities=26% Similarity=0.434 Sum_probs=206.6
Q ss_pred CccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.+++.+.|++. +.||+|+||+||+|.++.+|+.||||++..... .....+.+|+.+|+++ +||||+++++++.+
T Consensus 7 ~~~~~~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~-- 82 (316)
T 2ac3_A 7 SGRFEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPG--HIRSRVFREVEMLYQCQGHRNVLELIEFFEE-- 82 (316)
T ss_dssp CCCTTTSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSS--CCHHHHHHHHHHHHHTCCCTTBCCEEEEEEE--
T ss_pred CcccceeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCcc--hhHHHHHHHHHHHHHhcCCCCeeeEEEEEee--
Confidence 45677889996 789999999999999999999999999975432 3456789999999985 79999999998743
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||
T Consensus 83 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l 124 (316)
T 2ac3_A 83 --------------------------------------EDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASAL 124 (316)
T ss_dssp --------------------------------------TTEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCEEEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHHHH
Confidence 357899999997 69999999888899999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
+|||++||+||||||+|||++.++. +||+|||++............ ........+||+.|+|||++.+.
T Consensus 125 ~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~~ 196 (316)
T 2ac3_A 125 DFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPI--------STPELLTPCGSAEYMAPEVVEAF 196 (316)
T ss_dssp HHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC---------------------------CCSGGGCCHHHHHHT
T ss_pred HHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCccccc--------cccccccccCCcCccChHHhhcc
Confidence 9999999999999999999998765 999999999865322110000 00112345799999999998641
Q ss_pred ----CCCCccchhHHHHHHHHHhhc---CCCchh---------------HHHHHHHHhhhcCCCCC-ccccCCHHHHHHH
Q 001059 584 ----PKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELPP-SWVAKFSEQESLL 640 (1170)
Q Consensus 584 ----~~~~~ksDIwSlGviL~ELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI 640 (1170)
..++.++|||||||++|||++ ||.... .......+......+|. .+...++++.+||
T Consensus 197 ~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li 276 (316)
T 2ac3_A 197 SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLI 276 (316)
T ss_dssp SHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHH
T ss_pred cccccCCCcccccHhHHHHHHHHHHCCCCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHH
Confidence 237899999999999999997 775432 11222222222333332 2345778999999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
++||+.||.+|||+.++++|||+.+..
T Consensus 277 ~~~L~~dP~~Rps~~e~l~hp~~~~~~ 303 (316)
T 2ac3_A 277 SKLLVRDAKQRLSAAQVLQHPWVQGCA 303 (316)
T ss_dssp HHHSCSSTTTSCCHHHHHHSTTCC---
T ss_pred HHHhhCChhhCCCHHHHhcChhhcCCC
Confidence 999999999999999999999998764
|
| >2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-40 Score=383.18 Aligned_cols=253 Identities=24% Similarity=0.405 Sum_probs=207.4
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
..+.++|++.+.||+|+||+||+|.++.+|+.||||+++..... ..+|+.+|.++ +||||++++++|.
T Consensus 18 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~------~~~E~~~l~~~~~hp~iv~~~~~~~----- 86 (342)
T 2qr7_A 18 IQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRD------PTEEIEILLRYGQHPNIITLKDVYD----- 86 (342)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTCC------CHHHHHHHHHHTTSTTBCCEEEEEE-----
T ss_pred cCccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccCC------hHHHHHHHHHhcCCCCcCeEEEEEE-----
Confidence 44668899999999999999999999999999999999754332 35688888888 7999999999873
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...+|+|||||+ |+|.+.+...+.+++..++.++.||+.||+|
T Consensus 87 -----------------------------------~~~~~~lv~E~~~gg~L~~~i~~~~~~~~~~~~~~~~qi~~al~~ 131 (342)
T 2qr7_A 87 -----------------------------------DGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEY 131 (342)
T ss_dssp -----------------------------------CSSEEEEEECCCCSCBHHHHHHTCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 2467899999996 5999999988889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC----CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~----~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||++||+||||||+|||+..+ +.+||+|||+++...... ......+||+.|+|||++.+ .
T Consensus 132 lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~ 195 (342)
T 2qr7_A 132 LHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAEN---------------GLLMTPCYTANFVAPEVLER-Q 195 (342)
T ss_dssp HHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTT---------------CCBCCSSCCSSCCCHHHHHH-H
T ss_pred HHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCC---------------CceeccCCCccccCHHHhcC-C
Confidence 999999999999999998543 359999999998653211 01234589999999999987 4
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCch---hHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTA---MERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATEL 657 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~---~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~ei 657 (1170)
.|+.++|||||||++|||++ ||... ...+....+......++ ..+...++++.+||++||..||.+|||+.++
T Consensus 196 ~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~i 275 (342)
T 2qr7_A 196 GYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALV 275 (342)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHH
Confidence 58899999999999999997 77642 23333333333333333 2456678899999999999999999999999
Q ss_pred HhccCCCC
Q 001059 658 LQDALPPQ 665 (1170)
Q Consensus 658 L~~~~~~~ 665 (1170)
++|||+..
T Consensus 276 l~hp~~~~ 283 (342)
T 2qr7_A 276 LRHPWIVH 283 (342)
T ss_dssp TTSHHHHT
T ss_pred hcCCeecC
Confidence 99999854
|
| >1evl_A Threonyl-tRNA synthetase; amino acid recognition, zinc ION, adenylate analog, deletion mutant, ligase; HET: TSB; 1.55A {Escherichia coli} SCOP: c.51.1.1 d.104.1.1 PDB: 1evk_A* 1fyf_A* 1kog_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.5e-40 Score=386.38 Aligned_cols=355 Identities=11% Similarity=0.037 Sum_probs=270.7
Q ss_pred cCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCCceeeecCCCC
Q 001059 711 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 711 ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.+.++|+.||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++.+.+.++||+ .|++|+.++|||+.|
T Consensus 15 ~~~~~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sG~~~~~~~em~~-~d~~~~~~~LrP~~~ 93 (401)
T 1evl_A 15 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNC 93 (401)
T ss_dssp CCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSGGGCCE-EEETTEEEEECSCSH
T ss_pred ecCCCCcceEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHHhcCcHhhhchhhEe-EecCCceEEEcCCCC
Confidence 4456899999999999999999999999999999999999999 222 224456789999 999999999999999
Q ss_pred HHHHHHHHhC----CCCceeEEEecCeEEcCCC--CC---CCCceeEeEEEEeCCCCcccHH---HHHHHHHHHHHHcCC
Q 001059 785 LPFIRWAISN----QKSSFKRYEISSVYRRAIG--HS---PPNRYLQGDFDIIGGASALTEA---EVLKVTMDIVTRFFH 852 (1170)
Q Consensus 785 ~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~--~~---~~~ef~Q~GvEiiG~~~~~aDa---Evi~la~~~l~~lgi 852 (1170)
++++|+++.+ +..|+|+||+|+|||+|++ +. |.|||+|+|+|+||. ...+|+ |++.++.++++.||+
T Consensus 94 ~~~~~~~~~~~~s~~~lP~r~~~~g~~fR~E~~~p~~Gl~R~reF~q~d~~~f~~-~~~~~~e~~e~i~~~~~~~~~lgl 172 (401)
T 1evl_A 94 PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCT-EEQIRDEVNGCIRLVYDMYSTFGF 172 (401)
T ss_dssp HHHHHHHTSSCCBGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEC-GGGHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHhhhhhhhhCChhhccccceecCCCCcccccccccCcEEecceEEeCC-HHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9999999864 2469999999999999884 54 566799999999995 567787 599999999999999
Q ss_pred CcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHh
Q 001059 853 AESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRF 932 (1170)
Q Consensus 853 ~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~ 932 (1170)
.+ +.+.++++. -..+|..+.+... - ...++++...+++
T Consensus 173 ~~-~~~~~~~~~-----~~~~~~~~~~~~a----~------------------~~~~~~l~~~g~~-------------- 210 (401)
T 1evl_A 173 EK-IVVKLSTRP-----EKRIGSDEMWDRA----E------------------ADLAVALEENNIP-------------- 210 (401)
T ss_dssp SC-CEEEEECCC-----SSCCSCHHHHHHH----H------------------HHHHHHHHHTTCC--------------
T ss_pred Cc-eEEEEecCC-----cccCCCHHHHHHH----H------------------HHHHHHHHhcCCC--------------
Confidence 74 999999853 0011111100000 0 0001111111110
Q ss_pred cCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCC--CCCcccceEEEEEeccCCCcccccccceecc
Q 001059 933 CGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPP--IESYHRNLFFQVFSVKEKYPATLVEGTLLAV 1010 (1170)
Q Consensus 933 ~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvr--gldYYtG~VFe~~~~~~~~~~~~~~~~~I~~ 1010 (1170)
+..++. + ...+| . .+|+.+++ |++||+|++|.-|.. +.+.
T Consensus 211 --------------~~~~~~------~--~~~y~--~--~~d~~~~~~~G~~~~~gt~~~d~~l------------~~~~ 252 (401)
T 1evl_A 211 --------------FEYQLG------E--GAFYG--P--KIEFTLYDCLDRAWQCGTVQLDFSL------------PSRL 252 (401)
T ss_dssp --------------CEEETT------C--SBTTB--C--EEEEEEECTTCCEEEEEEEEEESSH------------HHHT
T ss_pred --------------ceecCC------C--ccccC--C--CcCeEEEecCCCeEEeeeeeecccc------------cccc
Confidence 000000 0 00011 2 36777777 999999999943321 2467
Q ss_pred ccccchhhhhcccccccccCCCCCCCCceEE-ec--cHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCccHHHHHHHH
Q 001059 1011 GGRYDYLLHRMWDREYVGYASRTNPPSGVGA-SL--ALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELV 1085 (1170)
Q Consensus 1011 GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGf-ai--glerL~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia 1085 (1170)
||||++. .|. ..+|++|+ ++ |+|||+.+|.+. ...+...+|.+|+|++.+ ++....|.+++
T Consensus 253 ~~~y~~~---~g~----------~~~p~~~~~~~~GgieRli~~l~e~~~~~~p~~~ap~~v~vi~~~-~~~~~~a~~l~ 318 (401)
T 1evl_A 253 SASYVGE---DNE----------RKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT-DSQSEYVNELT 318 (401)
T ss_dssp TCCEECT---TSC----------EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESS-GGGHHHHHHHH
T ss_pred CCEEECC---CCC----------CcCcEEEEecCCCcHHHHHHHHHHHhCCcCCCCCCCeEEEEEecC-HHHHHHHHHHH
Confidence 9999854 222 23699999 88 999999887632 222223467899999996 67889999999
Q ss_pred HHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 001059 1086 AELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1086 ~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
+.||+.|++|++++. ++++++++++|++.|+|++|+||++|+++|+|+||+|.+++|..|+++++++.+++.++..
T Consensus 319 ~~Lr~~Gi~v~~d~~-~~~~~~k~~~A~~~g~p~~iiiG~~e~~~~~v~vk~~~~~~q~~v~~~el~~~l~~~~~~~ 394 (401)
T 1evl_A 319 QKLSNAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 394 (401)
T ss_dssp HHHHHTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTSCEEEEEEHHHHHHHHHHHHHTT
T ss_pred HHHHHCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECcchhhCCeEEEEECCCCceEEeeHHHHHHHHHHHHhhh
Confidence 999999999998876 6799999999999999999999999999999999999999999999999999999888753
|
| >1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-40 Score=390.18 Aligned_cols=257 Identities=26% Similarity=0.390 Sum_probs=206.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
..+|++.+.||+|+||+||+|+++.+|+.||||++..... ...+|+.+|+.++|||||+++++|...+.
T Consensus 53 ~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~------~~~~E~~il~~l~hpniv~l~~~~~~~~~----- 121 (420)
T 1j1b_A 53 EVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR------FKNRELQIMRKLDHCNIVRLRYFFYSSGE----- 121 (420)
T ss_dssp EEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT------SCCHHHHHHHTCCCTTBCCEEEEEEEEET-----
T ss_pred cceEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch------hHHHHHHHHHHcCCCCccceeeEEeccCC-----
Confidence 4579999999999999999999999999999999864322 23479999999999999999998855310
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
..+..++++||||++++|.+.+. ....+++..++.++.||+.||+||
T Consensus 122 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~L 172 (420)
T 1j1b_A 122 -----------------------------KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172 (420)
T ss_dssp -----------------------------TTTEEEEEEEEECCCEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------CCcceeEEeehhcccccHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 12345788999999998877664 346799999999999999999999
Q ss_pred HhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 510 HGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
|++||+||||||+|||++.+ +.+||+|||+++.+.... .....+||+.|+|||++.+...|+.
T Consensus 173 H~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~ 236 (420)
T 1j1b_A 173 HSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNVSYICSRYYRAPELIFGATDYTS 236 (420)
T ss_dssp HTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSCCSCTTSCCHHHHTTCSSCCT
T ss_pred HHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCC----------------CceeeeeCCCcCCHHHHcCCCCCCc
Confidence 99999999999999999965 568999999998643211 1234689999999999987557999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcC-----------------CCCC----c-----cccCCHHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKG-----------------ELPP----S-----WVAKFSEQESL 639 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~-----------------~~p~----~-----~~~~~~e~~~L 639 (1170)
++|||||||++|||++ ||......+....++...+ .+|. . ....++++.+|
T Consensus 237 ~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~L 316 (420)
T 1j1b_A 237 SIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIAL 316 (420)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHH
T ss_pred hhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHH
Confidence 9999999999999997 7876655444443332111 1111 0 12346799999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
|++||..||.+|||+.++++|+||...
T Consensus 317 i~~~L~~dP~~R~t~~e~l~hp~f~~~ 343 (420)
T 1j1b_A 317 CSRLLEYTPTARLTPLEACAHSFFDEL 343 (420)
T ss_dssp HHHHSCSSGGGSCCHHHHHTSGGGGGG
T ss_pred HHHhccCChhHCCCHHHHhCCHhhccc
Confidence 999999999999999999999999754
|
| >3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-40 Score=382.13 Aligned_cols=251 Identities=27% Similarity=0.398 Sum_probs=209.8
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------hHHHHHHHHHHHHhccCCCceeEEEEEe
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWF 424 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~l~HpnIV~l~~~~~ 424 (1170)
+.+.++|++.+.||+|+||+||+|+++.+|+.||||+++....... ....+.+|+.+|+.++||||++++++|.
T Consensus 20 ~~~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~ 99 (335)
T 3dls_A 20 GEYSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFE 99 (335)
T ss_dssp THHHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEE
T ss_pred cccccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEe
Confidence 4567899999999999999999999999999999999986542211 2345778999999999999999999883
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-C-cHHHHHHhcCCCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-R-TLRQVFESYDHFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-g-sL~~~l~~~~~l~e~~~~~i~~qI 502 (1170)
+ ...+|+||||++ | +|.+++.....+++..++.++.||
T Consensus 100 ~----------------------------------------~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~~qi 139 (335)
T 3dls_A 100 N----------------------------------------QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQL 139 (335)
T ss_dssp C----------------------------------------SSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHHHHH
T ss_pred e----------------------------------------CCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHHHHH
Confidence 2 457899999985 5 899999988899999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
+.||+|||++||+||||||+|||++.++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 140 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 203 (335)
T 3dls_A 140 VSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGK----------------LFYTFCGTIEYCAPEVLMG 203 (335)
T ss_dssp HHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTC----------------CBCEECSCGGGCCHHHHTT
T ss_pred HHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCC----------------ceeccCCCccccChhhhcC
Confidence 999999999999999999999999999999999999998653211 1234579999999999988
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
...++.++|||||||++|+|++ ||...... .. . ........++++.+||.+||+.||.+|||+.++++
T Consensus 204 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~-~--~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~ 274 (335)
T 3dls_A 204 NPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VE-A--AIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVT 274 (335)
T ss_dssp CCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TT-T--CCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hh-h--ccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 5445889999999999999997 77653221 11 1 11122345779999999999999999999999999
Q ss_pred ccCCCCc
Q 001059 660 DALPPQM 666 (1170)
Q Consensus 660 ~~~~~~~ 666 (1170)
|||+.+.
T Consensus 275 hp~~~~~ 281 (335)
T 3dls_A 275 DPWVTQP 281 (335)
T ss_dssp CTTTTCC
T ss_pred CccccCC
Confidence 9999774
|
| >3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=382.51 Aligned_cols=284 Identities=25% Similarity=0.372 Sum_probs=208.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC-
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD- 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~- 432 (1170)
.++|++.+.||+|+||+||+|++..+|+.||||++...... ..+|+.+|+.++||||++++++|...+.....
T Consensus 6 ~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~~------~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~ 79 (383)
T 3eb0_A 6 SKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRY------KNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKP 79 (383)
T ss_dssp CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTTS------CCHHHHHHTTCCCTTBCCEEEEEEEC-------
T ss_pred cceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcch------HHHHHHHHHHcCCCCccchhheeeecCcccccc
Confidence 46899999999999999999999999999999998743222 34799999999999999999998654210000
Q ss_pred ----CCC-CCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHH
Q 001059 433 ----GDS-MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 433 ----~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~ 503 (1170)
.+. .++... ... ...............++++|||||+++|.+.+. ....+++..++.++.||+
T Consensus 80 ~~~~~~~~~~~~~~--~~~------~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~ 151 (383)
T 3eb0_A 80 PQPPDDHNKLGGKN--NGV------NNHHKSVIVNPSQNKYLNVIMEYVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLF 151 (383)
T ss_dssp --------------------------------------CCEEEEEECCCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHH
T ss_pred cccccccccccccc--ccc------ccccccccccCCCceEEEEEEecCCccHHHHHHHHHhcCCCCCHHHHHHHHHHHH
Confidence 000 000000 000 000000000113456799999999998877765 346799999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
.||+|||++||+||||||+|||++ .++.+||+|||+|+...... ......||+.|+|||++.+
T Consensus 152 ~aL~~LH~~gi~H~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~ 215 (383)
T 3eb0_A 152 RAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSE----------------PSVAYICSRFYRAPELMLG 215 (383)
T ss_dssp HHHHHHHTTTEECSCCCGGGEEEETTTTEEEECCCTTCEECCTTS----------------CCCCCCCCSSCCCHHHHTT
T ss_pred HHHHHHHHCcCccCccCHHHEEEcCCCCcEEEEECCCCcccCCCC----------------CCcCcccCCCccCHHHhcC
Confidence 999999999999999999999998 57899999999998653211 1234578999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-----------------CC---------ccccCC
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-----------------PP---------SWVAKF 633 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-----------------p~---------~~~~~~ 633 (1170)
...++.++|||||||++|||++ ||......+....++...+.. |. .....+
T Consensus 216 ~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (383)
T 3eb0_A 216 ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTP 295 (383)
T ss_dssp CSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTC--CCCCCCCCCCHHHHSCTTCC
T ss_pred CCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhCcccccccCCccCcccHHhhCCCCCC
Confidence 6669999999999999999997 887666555544443321111 10 112356
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+++.+||.+||+.||.+|||+.++|+||||....
T Consensus 296 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (383)
T 3eb0_A 296 SLAIDLLEQILRYEPDLRINPYEAMAHPFFDHLR 329 (383)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHHH
T ss_pred HHHHHHHHHHccCChhhCCCHHHHhcCHHHHHHH
Confidence 7899999999999999999999999999997653
|
| >3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-40 Score=411.62 Aligned_cols=261 Identities=26% Similarity=0.378 Sum_probs=222.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
..+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..+|..+ +||||++++++|.
T Consensus 338 ~~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~----- 412 (674)
T 3pfq_A 338 MKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQ----- 412 (674)
T ss_dssp --CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECB-----
T ss_pred ccccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEE-----
Confidence 346899999999999999999999999999999999974321 112345688899999988 7999999998872
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|
T Consensus 413 -----------------------------------~~~~~~lV~E~~~gg~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~ 457 (674)
T 3pfq_A 413 -----------------------------------TMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIAIGLFF 457 (674)
T ss_dssp -----------------------------------CSSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------eCCEEEEEEeCcCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 3467899999996 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|||||||||+||||+.++++||+|||+|+...... ......+||+.|+|||++.+ ..|+.
T Consensus 458 LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~---------------~~~~~~~GT~~Y~APE~l~~-~~~~~ 521 (674)
T 3pfq_A 458 LQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---------------VTTKTFCGTPDYIAPEIIAY-QPYGK 521 (674)
T ss_dssp HHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTT---------------CCBCCCCSCSSSCCHHHHTC-CCBST
T ss_pred HHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCC---------------cccccccCCCcccCHhhhcC-CCCCc
Confidence 999999999999999999999999999999998532111 11345689999999999987 57999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH-----HHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA-----TELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta-----~eiL~~ 660 (1170)
++|||||||+||||++ ||......+....++.....+|. ..++++.+||++||+.||.+||++ ++|++|
T Consensus 522 ~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h 598 (674)
T 3pfq_A 522 SVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK---SMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEH 598 (674)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT---TSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSS
T ss_pred cceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc---cCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhcC
Confidence 9999999999999997 89887777777777665555554 467799999999999999999997 999999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
+||....|+.+
T Consensus 599 ~ff~~i~w~~l 609 (674)
T 3pfq_A 599 AFFRYIDWEKL 609 (674)
T ss_dssp GGGSSCCHHHH
T ss_pred ccccCCCHHHH
Confidence 99999988754
|
| >2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-40 Score=402.03 Aligned_cols=258 Identities=27% Similarity=0.416 Sum_probs=213.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++|||||+++++|.+
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~------- 255 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYET------- 255 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEee-------
Confidence 5789999999999999999999999999999999975321 11234568899999999999999999988732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ |+|.+++...+. +++..++.++.||+.||+||
T Consensus 256 ---------------------------------~~~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yL 302 (576)
T 2acx_A 256 ---------------------------------KDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDL 302 (576)
T ss_dssp ---------------------------------SSEEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 699999876543 99999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++++||+|||+|+...... .....+||+.|+|||++.+ ..|+.+
T Consensus 303 H~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~----------------~~~~~~GT~~Y~APEvl~~-~~~~~~ 365 (576)
T 2acx_A 303 HRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQ----------------TIKGRVGTVGYMAPEVVKN-ERYTFS 365 (576)
T ss_dssp HHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC----------------CEECCCSCGGGCCHHHHTT-CEESSH
T ss_pred HHCCEeccCCchheEEEeCCCCeEEEecccceecccCc----------------cccccCCCccccCHHHHcC-CCCCcc
Confidence 99999999999999999999999999999998643211 1234589999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATEL 657 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~ei 657 (1170)
+|||||||++|||++ ||.... .......+......+| ...++++++||++||+.||.+|| ++.++
T Consensus 366 ~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p---~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~ei 442 (576)
T 2acx_A 366 PDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS---ERFSPQARSLCSQLLCKDPAERLGCRGGSAREV 442 (576)
T ss_dssp HHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHH
T ss_pred chHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC---ccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHH
Confidence 999999999999997 886542 1222222222222233 35678999999999999999999 89999
Q ss_pred HhccCCCCchHHHH
Q 001059 658 LQDALPPQMEYELL 671 (1170)
Q Consensus 658 L~~~~~~~~~~~~~ 671 (1170)
++||||....++.+
T Consensus 443 l~HpfF~~i~w~~l 456 (576)
T 2acx_A 443 KEHPLFKKLNFKRL 456 (576)
T ss_dssp HTSGGGTTCCHHHH
T ss_pred HhChhhccCCHHHH
Confidence 99999999887644
|
| >2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-39 Score=373.84 Aligned_cols=273 Identities=25% Similarity=0.371 Sum_probs=212.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++... ........+.+|+.+++.++||||+++++++....
T Consensus 9 i~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~----- 82 (353)
T 2b9h_A 9 ISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF-DKPLFALRTLREIKILKHFKHENIITIFNIQRPDS----- 82 (353)
T ss_dssp SCTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCC-SSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSC-----
T ss_pred cccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeeccc-ccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccc-----
Confidence 457999999999999999999999999999999999643 33445567889999999999999999998863210
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
......+|++|||++++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 83 ------------------------------~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~ 131 (353)
T 2b9h_A 83 ------------------------------FENFNEVYIIQELMQTDLHRVIST-QMLSDDHIQYFIYQTLRAVKVLHGS 131 (353)
T ss_dssp ------------------------------STTCCCEEEEECCCSEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------cCccceEEEEEeccCccHHHHHhh-cCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 112356899999999999998876 5699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+++........... ...........+||+.|+|||++.+...++.++||
T Consensus 132 ~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~-----~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di 206 (353)
T 2b9h_A 132 NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSE-----PTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDV 206 (353)
T ss_dssp TEECSCCCGGGEEECTTCCEEECCCTTCEECC---------------------CCCCCCGGGCCHHHHHSCCCCCHHHHH
T ss_pred CeecCCCCHHHeEEcCCCcEEEEecccccccccccccccC-----ccccccchhhccccccccCCeeeccCCCccchhhH
Confidence 9999999999999999999999999999876432211000 00000112345899999999998765678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC------------------------CC-----CccccCCHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE------------------------LP-----PSWVAKFSEQESLL 640 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~------------------------~p-----~~~~~~~~e~~~LI 640 (1170)
|||||++|+|++ ||...........+....+. .+ ..+...++++.+||
T Consensus 207 ~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li 286 (353)
T 2b9h_A 207 WSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLL 286 (353)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHH
Confidence 999999999996 77765544333322211111 00 11235678899999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+||+.||.+|||+.++++|||+....
T Consensus 287 ~~~L~~dP~~Rpt~~ell~hp~~~~~~ 313 (353)
T 2b9h_A 287 QRMLVFDPAKRITAKEALEHPYLQTYH 313 (353)
T ss_dssp HHHSCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred HHhcCcCcccCCCHHHHhcCccccccC
Confidence 999999999999999999999998754
|
| >2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=369.31 Aligned_cols=256 Identities=23% Similarity=0.398 Sum_probs=211.6
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
....++|++.+.||+|+||+||+|+++.+|+.||+|+++.... .....+.+|+.+++.++||||++++++|.+
T Consensus 5 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 77 (304)
T 2jam_A 5 TNIRKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA--FRDSSLENEIAVLKKIKHENIVTLEDIYES----- 77 (304)
T ss_dssp -CHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC--------HHHHHHHHHHHCCCTTBCCEEEEEEC-----
T ss_pred cchhccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc--cchHHHHHHHHHHHhCCCCCeeehhhhccc-----
Confidence 3456789999999999999999999999999999999975432 233568899999999999999999988732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++||||+ ++|.+++...+.+++..++.++.||+.||+||
T Consensus 78 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l 122 (304)
T 2jam_A 78 -----------------------------------TTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYL 122 (304)
T ss_dssp -----------------------------------SSEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEEcCCCccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 356899999996 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 510 HGQGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
|++||+||||||+|||+ +.++.+||+|||++...... ......||+.|+|||++.+ ..+
T Consensus 123 H~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~ 184 (304)
T 2jam_A 123 HENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNG-----------------IMSTACGTPGYVAPEVLAQ-KPY 184 (304)
T ss_dssp HHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCB-----------------TTHHHHSCCCBCCTTTBSS-CSC
T ss_pred HHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCC-----------------ccccccCCCCccChHHhcc-CCC
Confidence 99999999999999999 77889999999998753211 1133579999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++|||||||++|+|++ ||...........+.......+ +.+...++++.+||.+||+.||.+|||+.++++|||
T Consensus 185 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~ 264 (304)
T 2jam_A 185 SKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPW 264 (304)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHH
T ss_pred CchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcc
Confidence 999999999999999997 7776655554444443333332 334567789999999999999999999999999998
Q ss_pred CCCc
Q 001059 663 PPQM 666 (1170)
Q Consensus 663 ~~~~ 666 (1170)
+...
T Consensus 265 ~~~~ 268 (304)
T 2jam_A 265 IDGN 268 (304)
T ss_dssp HHSS
T ss_pred ccCC
Confidence 7653
|
| >3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.7e-40 Score=378.41 Aligned_cols=264 Identities=25% Similarity=0.387 Sum_probs=211.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC---CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD---KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~---~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..++|++.+.||+|+||+||+|.++.+++.||+|++.... ......+.+.+|+.+++.++||||++++++|.+
T Consensus 24 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~---- 99 (345)
T 3hko_A 24 LQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYED---- 99 (345)
T ss_dssp HHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhcc----
Confidence 3578999999999999999999999999999999996532 233455789999999999999999999998832
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc---------------------
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--------------------- 487 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--------------------- 487 (1170)
...+|+|||||+ ++|.+++...
T Consensus 100 ------------------------------------~~~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 143 (345)
T 3hko_A 100 ------------------------------------EQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCP 143 (345)
T ss_dssp ------------------------------------SSEEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSH
T ss_pred ------------------------------------CCeEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccc
Confidence 457899999996 6999988521
Q ss_pred -------------------CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCC--CEEEeecCcchhcccc
Q 001059 488 -------------------DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLE 546 (1170)
Q Consensus 488 -------------------~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~--~vKL~DFGlA~~~~~~ 546 (1170)
..+++..++.++.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~ 223 (345)
T 3hko_A 144 ECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKL 223 (345)
T ss_dssp HHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGT
T ss_pred cccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEecCCCceEEEeecccccccccc
Confidence 1136778899999999999999999999999999999998776 8999999999865322
Q ss_pred ccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc
Q 001059 547 QLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK 622 (1170)
Q Consensus 547 ~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~ 622 (1170)
... .........||+.|+|||++.+. ..++.++|||||||++|||++ ||......+.........
T Consensus 224 ~~~-----------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~ 292 (345)
T 3hko_A 224 NNG-----------EYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKK 292 (345)
T ss_dssp TCC-------------------CCCGGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred Ccc-----------ccccccccCCCccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHhcc
Confidence 100 01122456799999999998752 468999999999999999997 887766666665555544
Q ss_pred CCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 623 GELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 623 ~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...+ +.+...++++.+||.+||+.||.+|||+.++|+|||+.+..
T Consensus 293 ~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~ 338 (345)
T 3hko_A 293 LCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFS 338 (345)
T ss_dssp CCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTS
T ss_pred cccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccCh
Confidence 4333 34456788999999999999999999999999999987654
|
| >2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-39 Score=377.80 Aligned_cols=258 Identities=22% Similarity=0.448 Sum_probs=214.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--h----hhHHHHHHHHHHHHhc-cCCCceeEEEEEe
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--L----PVNDRILREVATLSRL-QHQHVVRYYQAWF 424 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~--~----~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~ 424 (1170)
.+.++|++.+.||+|+||.||+|+++.+|+.||||+++..... . ...+.+.+|+.+++.+ +||||++++++|.
T Consensus 91 ~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~ 170 (365)
T 2y7j_A 91 EFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYE 170 (365)
T ss_dssp HHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred hhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEe
Confidence 3457899999999999999999999999999999999765422 1 1245678999999999 8999999999873
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~ 503 (1170)
. ...+|+|||||+| +|.+++.....+++..++.++.||+
T Consensus 171 ~----------------------------------------~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~~qi~ 210 (365)
T 2y7j_A 171 S----------------------------------------SSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210 (365)
T ss_dssp B----------------------------------------SSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred e----------------------------------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 2 3578999999975 9999998888899999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||.|||++||+||||||+|||++.++.+||+|||++..+.... .....+||+.|+|||++.+.
T Consensus 211 ~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~ 274 (365)
T 2y7j_A 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGE----------------KLRELCGTPGYLAPEILKCS 274 (365)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHT
T ss_pred HHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCc----------------ccccCCCCCCccChhhcccc
Confidence 99999999999999999999999999999999999998653211 12345899999999998632
Q ss_pred -----CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 584 -----PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 584 -----~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
..++.++|||||||++|+|++ ||...........+.......+ +.+...++++.+||++||+.||.+|||+
T Consensus 275 ~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 354 (365)
T 2y7j_A 275 MDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTA 354 (365)
T ss_dssp TCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred ccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCH
Confidence 347899999999999999997 7876555544444433333332 3456778899999999999999999999
Q ss_pred HHHHhccCCCC
Q 001059 655 TELLQDALPPQ 665 (1170)
Q Consensus 655 ~eiL~~~~~~~ 665 (1170)
.++++||||.+
T Consensus 355 ~ell~hp~f~r 365 (365)
T 2y7j_A 355 EQALQHPFFER 365 (365)
T ss_dssp HHHHHSGGGCC
T ss_pred HHHhcCcccCC
Confidence 99999999863
|
| >3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=363.88 Aligned_cols=256 Identities=24% Similarity=0.395 Sum_probs=211.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++.+.||+|+||.||+|+++.+|+.||+|+++...... ...+.+.+|+.+++.++||||+++++++..
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---- 79 (283)
T 3bhy_A 4 EDHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFEN---- 79 (283)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred hhhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecC----
Confidence 467999999999999999999999999999999997654321 135678999999999999999999998732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|
T Consensus 80 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~ 123 (283)
T 3bhy_A 80 ------------------------------------KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHY 123 (283)
T ss_dssp ------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEeecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 6999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCC----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||++||+||||||+||+++.++ .+||+|||++....... ......||+.|+|||++.+ .
T Consensus 124 lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~ 186 (283)
T 3bhy_A 124 LHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGN----------------EFKNIFGTPEFVAPEIVNY-E 186 (283)
T ss_dssp HHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC------------------------CCCGGGCCHHHHTT-C
T ss_pred HHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCC----------------cccccCCCcCccCcceecC-C
Confidence 9999999999999999998877 89999999998643211 1133579999999999987 5
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++||||||+++|+|++ ||......+............+. .+...++.+.+||++||+.||.+|||+.++++|
T Consensus 187 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 266 (283)
T 3bhy_A 187 PLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266 (283)
T ss_dssp CCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHHC
T ss_pred CCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHhC
Confidence 68999999999999999997 77766555544444333333332 335667889999999999999999999999999
Q ss_pred cCCCCc
Q 001059 661 ALPPQM 666 (1170)
Q Consensus 661 ~~~~~~ 666 (1170)
+|+...
T Consensus 267 ~~~~~~ 272 (283)
T 3bhy_A 267 SWIKAI 272 (283)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987654
|
| >2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=380.48 Aligned_cols=255 Identities=25% Similarity=0.379 Sum_probs=207.9
Q ss_pred CCceE--EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 355 NDFEE--LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 355 ~~y~~--~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+.|.+ .+.||+|+||.||+|.+..+|+.||+|+++... ....+.+.+|+.+|++++||||++++++|.+
T Consensus 87 ~~~~~~~~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------- 157 (373)
T 2x4f_A 87 SFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRG--MKDKEEVKNEISVMNQLDHANLIQLYDAFES------- 157 (373)
T ss_dssp GTEEEEEEEECC-----CEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred cceeeecceEEecCcCEEEEEEEEcCCCcEEEEEEEcccc--cccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------
Confidence 34444 678999999999999999999999999997532 2345679999999999999999999998732
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 158 ---------------------------------~~~~~lv~E~~~~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~LH 204 (373)
T 2x4f_A 158 ---------------------------------KNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204 (373)
T ss_dssp ---------------------------------SSEEEEEEECCTTCEEHHHHHHTGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeCCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999997 5898887654 46999999999999999999999
Q ss_pred hCCccccCCCCCceee--cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 511 GQGIIHRDLTPNNIFF--DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi--~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
++||+||||||+|||+ +.++.+||+|||+++...... .....+||+.|+|||++.+ ..++.
T Consensus 205 ~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~~~ 267 (373)
T 2x4f_A 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPRE----------------KLKVNFGTPEFLAPEVVNY-DFVSF 267 (373)
T ss_dssp HTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTC----------------BCCCCCSSCTTCCHHHHTT-CBCCH
T ss_pred HCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCcc----------------ccccccCCCcEeChhhccC-CCCCc
Confidence 9999999999999999 567889999999998653211 1233579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
++|||||||++|||++ ||......+....+......++ ..+...++++.+||.+||+.||.+|||+.++|+||||.
T Consensus 268 ~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~ 347 (373)
T 2x4f_A 268 PTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLS 347 (373)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred HHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcC
Confidence 9999999999999997 8877766666655555444443 34566788999999999999999999999999999998
Q ss_pred CchH
Q 001059 665 QMEY 668 (1170)
Q Consensus 665 ~~~~ 668 (1170)
....
T Consensus 348 ~~~~ 351 (373)
T 2x4f_A 348 DHKL 351 (373)
T ss_dssp CHHH
T ss_pred CCch
Confidence 7653
|
| >3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-39 Score=375.96 Aligned_cols=259 Identities=25% Similarity=0.409 Sum_probs=209.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.+.+.||+|+||.||+|+++.+|+.||||++............+.+|+.+++.++||||+++++++...+.
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~----- 97 (353)
T 3coi_A 23 PKTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASS----- 97 (353)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSS-----
T ss_pred CceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccc-----
Confidence 478999999999999999999999999999999997655555556788999999999999999999998743210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......+|++|||++++|.+++.. .+++..++.++.||+.||+|||++|
T Consensus 98 -----------------------------~~~~~~~~lv~e~~~~~l~~~~~~--~~~~~~~~~i~~qi~~al~~LH~~~ 146 (353)
T 3coi_A 98 -----------------------------LRNFYDFYLVMPFMQTDLQKIMGL--KFSEEKIQYLVYQMLKGLKYIHSAG 146 (353)
T ss_dssp -----------------------------GGGCCCCEEEEECCSEEGGGTTTS--CCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccceeEEEEeccccCCHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 011234699999999998887643 5999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||+++..... .+..+||+.|+|||++.+...++.++|||
T Consensus 147 ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~ 208 (353)
T 3coi_A 147 VVHRDLKPGNLAVNEDCELKILDFGLARHADAE------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIW 208 (353)
T ss_dssp CCCSSCCGGGEEECTTCCEEECSTTCTTC--------------------------CCSBCCSCHHHHSCCSCCCTTHHHH
T ss_pred cccCCCCHHHEeECCCCcEEEeecccccCCCCC------------------ccccccCcCcCCHHHHhCcCCCCchhhHH
Confidence 999999999999999999999999999754211 13457899999999998756789999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcC----------------------------CCCCccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKG----------------------------ELPPSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~----------------------------~~p~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||......+....+....+ .++..+...++++.+||.+
T Consensus 209 slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 288 (353)
T 3coi_A 209 SVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEK 288 (353)
T ss_dssp HHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHH
Confidence 99999999997 7776544433332222111 1122334567899999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||+.||.+|||+.++++||||...
T Consensus 289 ~L~~dp~~Rpt~~e~l~hp~f~~~ 312 (353)
T 3coi_A 289 MLELDVDKRLTAAQALTHPFFEPF 312 (353)
T ss_dssp HSCSCTTTSCCHHHHHTSGGGTTT
T ss_pred HcCCCcccCCCHHHHhcCcchhhc
Confidence 999999999999999999999765
|
| >4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=383.56 Aligned_cols=258 Identities=26% Similarity=0.378 Sum_probs=206.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
...+|++.+.||+|+||+||+|++..+++ ||+|++...... ..+|+.+|+.++||||++++++|...+.
T Consensus 38 ~~~~Y~~~~~lG~G~~g~V~~a~~~~~~~-~aikk~~~~~~~------~~~E~~il~~l~h~niv~l~~~~~~~~~---- 106 (394)
T 4e7w_A 38 REIAYTNCKVIGNGSFGVVFQAKLVESDE-VAIKKVLQDKRF------KNRELQIMRIVKHPNVVDLKAFFYSNGD---- 106 (394)
T ss_dssp EEEEEEEEEEEEEETTEEEEEEEETTTEE-EEEEEEECCTTS------CCHHHHHHHTCCCTTBCCEEEEEEEESS----
T ss_pred ccceEEEeEEEeeCCCeEEEEEEECCCCe-EEEEEEecCcch------HHHHHHHHHhCCCCCcceEEEEEEecCC----
Confidence 45689999999999999999999986665 888887543221 2379999999999999999999865320
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....++|+|||||++++...+. ....+++..++.++.||+.||+|
T Consensus 107 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~ 156 (394)
T 4e7w_A 107 ------------------------------KKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAY 156 (394)
T ss_dssp ------------------------------SSSCEEEEEEEECCSEEHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCceEEEEEeeccCccHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHH
Confidence 12346789999999987766554 35679999999999999999999
Q ss_pred HHhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
||++||+||||||+|||++ .++.+||+|||+|+...... .....+||+.|+|||++.+...|+
T Consensus 157 LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~ 220 (394)
T 4e7w_A 157 IHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE----------------PNVSYICSRYYRAPELIFGATNYT 220 (394)
T ss_dssp HHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSSCSCGGGCCHHHHTTCSSCC
T ss_pred HHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC----------------CCcccccCcCccCHHHHcCCCCCC
Confidence 9999999999999999999 78999999999998653211 123467899999999998766799
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-----------------CCC---------ccccCCHHHHH
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LPP---------SWVAKFSEQES 638 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p~---------~~~~~~~e~~~ 638 (1170)
.++|||||||++|||++ ||...........+....+. +|. .....++++.+
T Consensus 221 ~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (394)
T 4e7w_A 221 TNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAID 300 (394)
T ss_dssp THHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHH
T ss_pred cHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHH
Confidence 99999999999999997 88776655544443332111 110 01236679999
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||.+||+.||.+|||+.++++||||....
T Consensus 301 li~~~L~~dP~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 301 LISRLLEYTPSARLTAIEALCHPFFDELR 329 (394)
T ss_dssp HHHHHCCSSGGGSCCHHHHHTSGGGSTTT
T ss_pred HHHHHhCCChhhCCCHHHHhcChhhhhhc
Confidence 99999999999999999999999998764
|
| >3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=368.10 Aligned_cols=248 Identities=25% Similarity=0.381 Sum_probs=199.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++ +|+.||||++..........+.+.+|+.+|++++||||++++++|..
T Consensus 36 ~~~y~i~~~lG~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 105 (309)
T 3p86_A 36 WCDLNIKEKIGAGSFGTVHRAEW--HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQ-------- 105 (309)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEE--TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhHceeeeEeecCCCeEEEEEEE--CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEE--------
Confidence 47899999999999999999987 48999999998766666666789999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ ++|.+++..... +++..++.++.||+.||+||
T Consensus 106 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~L 153 (309)
T 3p86_A 106 --------------------------------PPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYL 153 (309)
T ss_dssp --------------------------------TTCCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 345799999996 599999986553 99999999999999999999
Q ss_pred HhCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 510 HGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 510 Hs~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|++| |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++
T Consensus 154 H~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~ 217 (309)
T 3p86_A 154 HNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF---------------LSSKSAAGTPEWMAPEVLRD-EPSN 217 (309)
T ss_dssp HTSSSCCCCTTCCGGGEEECTTCCEEECCCC--------------------------------CCTTSCHHHHTT-CCCC
T ss_pred HcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccc---------------cccccCCCCccccChhhhcC-CCCC
Confidence 9999 9999999999999999999999999998543211 11234579999999999988 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|||++ ||......+....... ....+......++++.+||.+||+.||.+|||+.++++.
T Consensus 218 ~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~ 292 (309)
T 3p86_A 218 EKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGF-KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDL 292 (309)
T ss_dssp TTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHH-SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999999997 8876665554443322 233333344667899999999999999999999999873
|
| >1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-39 Score=385.09 Aligned_cols=256 Identities=27% Similarity=0.391 Sum_probs=201.3
Q ss_pred CccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh-ccCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR-LQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~-l~HpnIV~l~~~~~e~~ 427 (1170)
.....++|.+. +.||+|+||+||+|+++.+|+.||||+++. ...+.+|+.++.+ .+||||++++++|...
T Consensus 56 ~~~~~~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~-------~~~~~~E~~~~~~~~~hp~iv~l~~~~~~~- 127 (400)
T 1nxk_A 56 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENL- 127 (400)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-
T ss_pred CCcccccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCc-------chhHHHHHHHHHHhcCCCCcceEeEEEeec-
Confidence 44567889987 689999999999999999999999999862 2357789988744 5899999999987431
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVE 504 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~ 504 (1170)
.....++|+|||||+ |+|.+++.... .+++..++.++.||+.
T Consensus 128 -----------------------------------~~~~~~~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~ 172 (400)
T 1nxk_A 128 -----------------------------------YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 172 (400)
T ss_dssp -----------------------------------ETTEEEEEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHH
T ss_pred -----------------------------------ccCCcEEEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 012467899999997 59999998653 5999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||+|||++||+||||||+|||++. ++.+||+|||+++...... ..+..+||+.|+|||++.
T Consensus 173 aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 236 (400)
T 1nxk_A 173 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN----------------SLTTPCYTPYYVAPEVLG 236 (400)
T ss_dssp HHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC---------------------------CTTCCGGGSC
T ss_pred HHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC----------------ccccCCCCCCccCHhhcC
Confidence 999999999999999999999997 7899999999998542111 124568999999999998
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHH----HHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQ----IVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~----~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
+ ..|+.++|||||||++|||++ ||....... ....+......++ +.+...++++.+||++||+.||.+|||
T Consensus 237 ~-~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt 315 (400)
T 1nxk_A 237 P-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 315 (400)
T ss_dssp C-CCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCC
T ss_pred C-CCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcC
Confidence 7 579999999999999999997 776443211 1112222223333 345677889999999999999999999
Q ss_pred HHHHHhccCCCC
Q 001059 654 ATELLQDALPPQ 665 (1170)
Q Consensus 654 a~eiL~~~~~~~ 665 (1170)
+.++++|+|+.+
T Consensus 316 ~~eil~hp~~~~ 327 (400)
T 1nxk_A 316 ITEFMNHPWIMQ 327 (400)
T ss_dssp HHHHHHSHHHHT
T ss_pred HHHHhcCccccC
Confidence 999999999864
|
| >2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-39 Score=369.14 Aligned_cols=278 Identities=26% Similarity=0.378 Sum_probs=210.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.....++|++++.||+|+||.||+|.+..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...+..
T Consensus 6 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 83 (320)
T 2i6l_A 6 GFDLGSRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLT--DPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQ 83 (320)
T ss_dssp CEEETTTEEEEEECC-----CEEEEEETTTTEEEEEEEEECC--SHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCB
T ss_pred cCccCCceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecC--ChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccc
Confidence 445568999999999999999999999999999999998743 344567889999999999999999999987433100
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
.............+|+||||++++|.+++.. +.+++..++.++.||+.||+||
T Consensus 84 --------------------------~~~~~~~~~~~~~~~lv~e~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~l 136 (320)
T 2i6l_A 84 --------------------------LTDDVGSLTELNSVYIVQEYMETDLANVLEQ-GPLLEEHARLFMYQLLRGLKYI 136 (320)
T ss_dssp --------------------------CCC----CCSCSEEEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------cccccccccccCceeEEeeccCCCHHHHhhc-CCccHHHHHHHHHHHHHHHHHH
Confidence 0000011124568899999999999998864 5699999999999999999999
Q ss_pred HhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 510 HGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
|++||+||||||+|||++ .++.+||+|||+++........ ........||+.|+|||++.+...++.
T Consensus 137 H~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 204 (320)
T 2i6l_A 137 HSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSH------------KGHLSEGLVTKWYRSPRLLLSPNNYTK 204 (320)
T ss_dssp HHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------------------CCCGGGSCCTTCCHHHHHCTTCCCH
T ss_pred HhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccc------------ccccccccccccccCcHHhcCcccCCc
Confidence 999999999999999997 5679999999999865321100 011234578999999999876567899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC----------------------C-----CccccCCHHHHH
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------P-----PSWVAKFSEQES 638 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------p-----~~~~~~~~e~~~ 638 (1170)
++|||||||++|||++ ||......+............ + ..+...++++.+
T Consensus 205 ~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (320)
T 2i6l_A 205 AIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVD 284 (320)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHH
T ss_pred hhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHH
Confidence 9999999999999997 787665544433332211110 0 112346789999
Q ss_pred HHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 639 LLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 639 LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
||++||+.||.+|||+.++++||||....+
T Consensus 285 li~~~L~~dP~~Rpt~~ell~hp~~~~~~~ 314 (320)
T 2i6l_A 285 FLEQILTFSPMDRLTAEEALSHPYMSIYSF 314 (320)
T ss_dssp HHHTTSCSSGGGSCCHHHHHTSHHHHTTCC
T ss_pred HHHHHcCCCccccCCHHHHhCCcccccccC
Confidence 999999999999999999999999876653
|
| >1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=381.36 Aligned_cols=257 Identities=21% Similarity=0.314 Sum_probs=205.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc--------CCCceeEEEE
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--------HQHVVRYYQA 422 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~--------HpnIV~l~~~ 422 (1170)
..+.++|++.+.||+|+||+||+|++..+|+.||||+++. .......+.+|+.+|+.++ ||||++++++
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~ 109 (397)
T 1wak_A 33 DLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS---AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDD 109 (397)
T ss_dssp CEETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEE
T ss_pred hhcCCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEec---CCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecc
Confidence 4456889999999999999999999999999999999863 2344567899999999996 7889999998
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFR 500 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~ 500 (1170)
|...+ .....+|+|||||+++|.+.+... ..+++..++.++.
T Consensus 110 ~~~~~------------------------------------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~i~~ 153 (397)
T 1wak_A 110 FKISG------------------------------------VNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPCVKKIIQ 153 (397)
T ss_dssp EEEEE------------------------------------TTEEEEEEEECCCCCBHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred eeecC------------------------------------CCCceEEEEEeccCccHHHHHHhcccCCCCHHHHHHHHH
Confidence 85321 134678999999999888877654 4699999999999
Q ss_pred HHHHHHHHHHhC-CccccCCCCCceeecCCC-------------------------------------------------
Q 001059 501 QIVEGLAHIHGQ-GIIHRDLTPNNIFFDARN------------------------------------------------- 530 (1170)
Q Consensus 501 qI~~gL~yLHs~-gIiHrDLKp~NILi~~~~------------------------------------------------- 530 (1170)
||+.||+|||++ ||+||||||+|||++.++
T Consensus 154 qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (397)
T 1wak_A 154 QVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKL 233 (397)
T ss_dssp HHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------------------CCTTSCCTTSGGGGGGC
T ss_pred HHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCCCCCCccccCCccccccccccccccccccc
Confidence 999999999998 999999999999999775
Q ss_pred CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCC
Q 001059 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFS 607 (1170)
Q Consensus 531 ~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~ 607 (1170)
.+||+|||+|+..... .+..+||+.|+|||++.+ ..++.++|||||||++|||++ ||.
T Consensus 234 ~~kl~DfG~a~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~ 294 (397)
T 1wak_A 234 KVKIADLGNACWVHKH------------------FTEDIQTRQYRSLEVLIG-SGYNTPADIWSTACMAFELATGDYLFE 294 (397)
T ss_dssp CEEECCGGGCEETTBC------------------SCSCCSCGGGCCHHHHHT-SCCCTHHHHHHHHHHHHHHHHSSCSCC
T ss_pred ceEecccccccccccc------------------CccCCCCCcccCChhhcC-CCCCcHHHHHHHHHHHHHHhhCCCCCC
Confidence 7999999999864311 234579999999999988 568999999999999999997 775
Q ss_pred chh------HHHHHHHHhhhcCCCCCc---------------------------------------cccCCHHHHHHHHH
Q 001059 608 TAM------ERQIVLSDLKQKGELPPS---------------------------------------WVAKFSEQESLLRR 642 (1170)
Q Consensus 608 ~~~------~~~~~~~~l~~~~~~p~~---------------------------------------~~~~~~e~~~LI~~ 642 (1170)
... ............+..|.. ....++++.+||.+
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ 374 (397)
T 1wak_A 295 PHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLP 374 (397)
T ss_dssp CCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGG
T ss_pred CCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHH
Confidence 432 111211111111111110 11223467899999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCC
Q 001059 643 LMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
||+.||.+|||+.++|+||||.+
T Consensus 375 ~L~~dP~~Rpt~~e~l~hp~~~~ 397 (397)
T 1wak_A 375 MLELIPEKRATAAECLRHPWLNS 397 (397)
T ss_dssp GGCSSGGGSCCHHHHHTSGGGGC
T ss_pred HhccChhhcCCHHHHhhCccccC
Confidence 99999999999999999999863
|
| >3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=397.26 Aligned_cols=260 Identities=28% Similarity=0.416 Sum_probs=214.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++++.||+|+||+||+|+++.+|+.||||++...... ......+.+|+.+|+.++||||++++++|..
T Consensus 183 ~~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~------ 256 (543)
T 3c4z_A 183 GEDWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFET------ 256 (543)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEEC------
T ss_pred ChhheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEee------
Confidence 357899999999999999999999999999999999753211 1224578899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----CCCCHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||
T Consensus 257 ----------------------------------~~~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL 302 (543)
T 3c4z_A 257 ----------------------------------KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302 (543)
T ss_dssp ----------------------------------SSEEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHH
Confidence 457899999997 5999988754 3699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++++||+|||+++.+.... ......+||+.|+|||++.+ ..|
T Consensus 303 ~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~---------------~~~~~~~GT~~Y~APE~l~~-~~~ 366 (543)
T 3c4z_A 303 EHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQ---------------TKTKGYAGTPGFMAPELLLG-EEY 366 (543)
T ss_dssp HHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTC---------------CCBCCCCSCTTTSCHHHHTT-CCB
T ss_pred HHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCC---------------cccccccCCccccChhhhcC-CCC
Confidence 99999999999999999999999999999999998653211 01234589999999999988 579
Q ss_pred CccchhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----H
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----A 654 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a 654 (1170)
+.++|||||||++|||++ ||.... ..+....+......+| ...++++.+||++||+.||.+||+ +
T Consensus 367 ~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~lL~~dP~~R~~~~~~~a 443 (543)
T 3c4z_A 367 DFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP---DKFSPASKDFCEALLQKDPEKRLGFRDGSC 443 (543)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCCBTTBS
T ss_pred ChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC---cccCHHHHHHHHHhccCCHhHCCCCcccCH
Confidence 999999999999999997 886542 2333333333333333 356789999999999999999995 5
Q ss_pred HHHHhccCCCCchHHHH
Q 001059 655 TELLQDALPPQMEYELL 671 (1170)
Q Consensus 655 ~eiL~~~~~~~~~~~~~ 671 (1170)
+++++||||....+..+
T Consensus 444 ~ei~~Hpff~~i~w~~l 460 (543)
T 3c4z_A 444 DGLRTHPLFRDISWRQL 460 (543)
T ss_dssp HHHHTSGGGTTCCHHHH
T ss_pred HHHHcCccccCCCHHHH
Confidence 89999999999987644
|
| >2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=361.88 Aligned_cols=257 Identities=29% Similarity=0.531 Sum_probs=213.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|+++.+|+.||+|++..........+.+.+|+.++++++||||++++++|...
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~------- 77 (279)
T 2w5a_A 5 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------- 77 (279)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEG-------
T ss_pred hhheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecC-------
Confidence 5799999999999999999999999999999999987666666677899999999999999999999987542
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc----CCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY----DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~----~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||++ +|.+++... ..+++..++.++.||+.||+|
T Consensus 78 -------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~ 126 (279)
T 2w5a_A 78 -------------------------------TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126 (279)
T ss_dssp -------------------------------GGTEEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCceEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHH
Confidence 24578999999975 999988653 349999999999999999999
Q ss_pred HHhCC-----ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 509 IHGQG-----IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 509 LHs~g-----IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
||++| |+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+
T Consensus 127 lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~- 190 (279)
T 2w5a_A 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------SFAKTFVGTPYYMSPEQMNR- 190 (279)
T ss_dssp HHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---C---------------HHHHHHHSCCTTCCHHHHHC-
T ss_pred HhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeecccc---------------ccccccCCCccccChHHhcc-
Confidence 99999 9999999999999999999999999998753211 00123478999999999987
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
..++.++||||||+++|+|++ ||......+....... +..+......++++.++|.+||+.||.+|||+.++++|
T Consensus 191 ~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 268 (279)
T 2w5a_A 191 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 268 (279)
T ss_dssp C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhh--cccccCCcccCHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 568999999999999999997 7776555444333322 33333334567899999999999999999999999999
Q ss_pred cCCCCc
Q 001059 661 ALPPQM 666 (1170)
Q Consensus 661 ~~~~~~ 666 (1170)
+|+..-
T Consensus 269 ~~~~~~ 274 (279)
T 2w5a_A 269 PLILEH 274 (279)
T ss_dssp TTCCGG
T ss_pred hhhhhh
Confidence 998754
|
| >3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-40 Score=390.46 Aligned_cols=259 Identities=23% Similarity=0.353 Sum_probs=202.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------hhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
...++|.+.+.||+|+||+||+|.++.+++.||||++...... ......+.+|+.+|++++||||++++++|.
T Consensus 132 ~~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~- 210 (419)
T 3i6u_A 132 ALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD- 210 (419)
T ss_dssp HHHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-
T ss_pred hhhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-
Confidence 3457899999999999999999999999999999999754311 111235789999999999999999998762
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~ 504 (1170)
...+|+|||||+ ++|.+.+.....+++..++.++.||+.
T Consensus 211 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~i~~qi~~ 250 (419)
T 3i6u_A 211 ----------------------------------------AEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLL 250 (419)
T ss_dssp ----------------------------------------SSEEEEEEECCTTCBGGGGTSSSCCCCHHHHHHHHHHHHH
T ss_pred ----------------------------------------cCceEEEEEcCCCCcHHHHHhccCCCCHHHHHHHHHHHHH
Confidence 234689999996 599999888888999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||+|||++||+||||||+|||++.+ +.+||+|||+|+...... .....+||+.|+|||++.
T Consensus 251 ~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 314 (419)
T 3i6u_A 251 AVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----------------LMRTLCGTPTYLAPEVLV 314 (419)
T ss_dssp HHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC---------------------------CTTCCTTTTC
T ss_pred HHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCc----------------cccccCCCCCccCceeee
Confidence 9999999999999999999999754 459999999998653211 123468999999999986
Q ss_pred C--CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh-hcCC-CCCccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 582 G--WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 582 ~--~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~-~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
+ ...|+.++|||||||++|+|++ ||............+. .... .+..+...++.+.+||++||+.||.+|||+
T Consensus 315 ~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~ 394 (419)
T 3i6u_A 315 SVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTT 394 (419)
T ss_dssp ----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCH
T ss_pred cCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCH
Confidence 3 2457899999999999999997 7764432222222222 1222 233456678899999999999999999999
Q ss_pred HHHHhccCCCCch
Q 001059 655 TELLQDALPPQME 667 (1170)
Q Consensus 655 ~eiL~~~~~~~~~ 667 (1170)
.++|+||||....
T Consensus 395 ~e~l~hp~~~~~~ 407 (419)
T 3i6u_A 395 EEALRHPWLQDED 407 (419)
T ss_dssp HHHHHSGGGCCHH
T ss_pred HHHhCCcccCChh
Confidence 9999999998764
|
| >4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-39 Score=364.77 Aligned_cols=254 Identities=28% Similarity=0.424 Sum_probs=204.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++++.||+|+||.||+|++..+|+.||+|++..... .......+.+|+.+++.++||||+++++++.
T Consensus 8 ~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~------ 81 (294)
T 4eqm_A 8 IINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDE------ 81 (294)
T ss_dssp CEETTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEE------
T ss_pred HhhccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeee------
Confidence 445789999999999999999999999999999999875443 3345578899999999999999999998873
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+|+|||||+| +|.+++...+.+++..++.++.||+.||+||
T Consensus 82 ----------------------------------~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~l 127 (294)
T 4eqm_A 82 ----------------------------------EDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHA 127 (294)
T ss_dssp ----------------------------------CSSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------eCCeEEEEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 24578999999975 9999999888999999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++....... ......+||+.|+|||++.+ ..++.+
T Consensus 128 H~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 192 (294)
T 4eqm_A 128 HDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSL--------------TQTNHVLGTVQYFSPEQAKG-EATDEC 192 (294)
T ss_dssp HHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---------------------------CCSSCCHHHHHT-CCCCTT
T ss_pred HHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccc--------------cccCccccCccccCHhHhcC-CCCCch
Confidence 999999999999999999999999999999986532210 11234579999999999988 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|+|++ ||............+....... ......++.+.++|.+||+.||.+||+..+.+.+
T Consensus 193 ~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~ 268 (294)
T 4eqm_A 193 TDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKD 268 (294)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHH
T ss_pred HhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHH
Confidence 999999999999997 8877666555544443222111 1234567789999999999999999954444443
|
| >3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=377.69 Aligned_cols=255 Identities=24% Similarity=0.390 Sum_probs=209.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++..+|+.||+|++... ........+.+|+.+|+.++||||++++++|..
T Consensus 32 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-------- 102 (360)
T 3eqc_A 32 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLE-IKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 102 (360)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECC-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEE--------
T ss_pred cccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccc-cCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEE--------
Confidence 47899999999999999999999999999999999754 344556789999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||++ +|.+++.....+++..++.++.||+.||+|||++
T Consensus 103 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lh~~ 150 (360)
T 3eqc_A 103 --------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 150 (360)
T ss_dssp --------------------------------TTEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEECCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3568999999975 9999999888999999999999999999999996
Q ss_pred -CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 513 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 513 -gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
||+||||||+|||++.++.+||+|||+++...... .....||+.|+|||++.+ ..++.++|
T Consensus 151 ~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~-----------------~~~~~gt~~y~aPE~~~~-~~~~~~~D 212 (360)
T 3eqc_A 151 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----------------ANSFVGTRSYMSPERLQG-THYSVQSD 212 (360)
T ss_dssp HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC---------------------CCCCTTCCHHHHTT-CCCSHHHH
T ss_pred CCEEcCCccHHHEEECCCCCEEEEECCCCccccccc-----------------ccCCCCCCCeECHHHHcC-CCCCchhh
Confidence 99999999999999999999999999998653221 134579999999999988 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHH-----------------------------------------HhhhcCCCCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLS-----------------------------------------DLKQKGELPP 627 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~-----------------------------------------~l~~~~~~p~ 627 (1170)
||||||++|+|++ ||......+.... .+........
T Consensus 213 i~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (360)
T 3eqc_A 213 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKL 292 (360)
T ss_dssp HHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCC
Confidence 9999999999996 7765433222111 0111111111
Q ss_pred ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 628 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 628 ~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.....++++.+||++||+.||.+|||+.++|+||||.+..
T Consensus 293 ~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~ 332 (360)
T 3eqc_A 293 PSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 332 (360)
T ss_dssp CTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred CcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence 1223567899999999999999999999999999987654
|
| >2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-39 Score=363.92 Aligned_cols=252 Identities=24% Similarity=0.469 Sum_probs=212.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||.||+|++..+++.||||++..... .......+.+|+.+++.++||||+++++++.+
T Consensus 12 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 85 (284)
T 2vgo_A 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHD------ 85 (284)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred hhhhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEc------
Confidence 45899999999999999999999999999999999964321 11224578899999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||+++ +|.+++.....+++..++.++.||+.||+|||
T Consensus 86 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 131 (284)
T 2vgo_A 86 ----------------------------------RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCH 131 (284)
T ss_dssp ----------------------------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999974 99999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++...... ......||+.|+|||++.+ ..++.++
T Consensus 132 ~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 193 (284)
T 2vgo_A 132 ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSL-----------------RRRTMCGTLDYLPPEMIEG-KTHDEKV 193 (284)
T ss_dssp TTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSS-----------------CBCCCCSCGGGCCHHHHTT-CCBCTTH
T ss_pred HCCceecCCCHHHEEEcCCCCEEEecccccccCccc-----------------ccccccCCCCcCCHHHhcc-CCCCccc
Confidence 999999999999999999999999999998653211 1134579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
||||||+++|+|++ ||......+...........+|+ ..++++.++|.+||+.||.+|||+.++++|||+..
T Consensus 194 Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~ 268 (284)
T 2vgo_A 194 DLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFPP---FLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVKA 268 (284)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHSCSSGGGSCCHHHHHTCHHHHH
T ss_pred chhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCCC---cCCHHHHHHHHHHhhcCHhhCCCHHHHhhCHHHHh
Confidence 99999999999996 78766555554444443333433 45679999999999999999999999999998753
|
| >2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-39 Score=363.40 Aligned_cols=259 Identities=26% Similarity=0.394 Sum_probs=209.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..+.|++++.||+|+||.||+|+++.+|+.||+|++.... ......+.+|+.+++.++||||+++++++..
T Consensus 17 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 87 (302)
T 2j7t_A 17 PNEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS--EEELEDYIVEIEILATCDHPYIVKLLGAYYH------- 87 (302)
T ss_dssp GGGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC------CCHHHHHHHHHHHHHCCCTTBCCEEEEEEC-------
T ss_pred CccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC--HHHHHHHHHHHHHHhcCCCCCEeeeeeeeee-------
Confidence 3578999999999999999999999999999999986543 2345678999999999999999999998743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||++ +|.+++.. ...+++..++.++.||+.||.|||
T Consensus 88 ---------------------------------~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH 134 (302)
T 2j7t_A 88 ---------------------------------DGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLH 134 (302)
T ss_dssp ---------------------------------C-CEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCeEEEEEEeCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh
Confidence 3467999999975 88888765 456999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc----CCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ----GWPKI 586 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~----~~~~~ 586 (1170)
++||+||||||+|||++.++.+||+|||++........ ......||+.|+|||++. ....+
T Consensus 135 ~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 199 (302)
T 2j7t_A 135 SKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ---------------KRDSFIGTPYWMAPEVVMCETMKDTPY 199 (302)
T ss_dssp HTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH---------------C-----CCGGGCCHHHHHHHHTTSTTT
T ss_pred cCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc---------------ccccccCChhhcCCeeeccccCCCCCC
Confidence 99999999999999999999999999999875422110 113357999999999984 22568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+.++|||||||++|+|++ ||..........................++++.+||.+||+.||.+|||+.++++|||+
T Consensus 200 ~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 279 (302)
T 2j7t_A 200 DYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFV 279 (302)
T ss_dssp TTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTT
T ss_pred chhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhcChHH
Confidence 999999999999999997 77766555554444433332223345567899999999999999999999999999999
Q ss_pred CCchH
Q 001059 664 PQMEY 668 (1170)
Q Consensus 664 ~~~~~ 668 (1170)
.....
T Consensus 280 ~~~~~ 284 (302)
T 2j7t_A 280 SSITS 284 (302)
T ss_dssp TTCCC
T ss_pred hhhcc
Confidence 88753
|
| >3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-39 Score=373.47 Aligned_cols=262 Identities=24% Similarity=0.400 Sum_probs=215.3
Q ss_pred ccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 351 SRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 351 ~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
..+.+.|.+. +.||+|+||+||+|+++.+|+.||||+++...........+.+|+.+++.+ +||||++++++|..
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~--- 100 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYEN--- 100 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEEC---
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEe---
Confidence 3345667777 889999999999999999999999999986555545567899999999999 56999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh--cCCCCHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES--YDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~--~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||++ +|.+++.. ...+++..++.++.||+.|
T Consensus 101 -------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~ 143 (327)
T 3lm5_A 101 -------------------------------------TSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEG 143 (327)
T ss_dssp -------------------------------------SSEEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHH
Confidence 4568999999975 89888854 3569999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
|+|||++||+||||||+|||++. ++.+||+|||+++...... .....+||+.|+|||++.+
T Consensus 144 L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~ 207 (327)
T 3lm5_A 144 VYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHAC----------------ELREIMGTPEYLAPEILNY 207 (327)
T ss_dssp HHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC-------------------------CCCGGGCCHHHHTT
T ss_pred HHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcc----------------ccccccCCcCccCCeeecC
Confidence 99999999999999999999988 7899999999998653211 1234579999999999987
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||||||++|+|++ ||......+....+.......+ +.+...++.+.+||.+||+.||.+|||++++|
T Consensus 208 -~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll 286 (327)
T 3lm5_A 208 -DPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICL 286 (327)
T ss_dssp -CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHT
T ss_pred -CCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHh
Confidence 568999999999999999997 8877666655555444343333 34456778999999999999999999999999
Q ss_pred hccCCCCchHH
Q 001059 659 QDALPPQMEYE 669 (1170)
Q Consensus 659 ~~~~~~~~~~~ 669 (1170)
+|+|+.+..++
T Consensus 287 ~h~~~~~~~~~ 297 (327)
T 3lm5_A 287 SHSWLQQWDFE 297 (327)
T ss_dssp TCGGGCCCCTT
T ss_pred CCHhhcccccc
Confidence 99999887643
|
| >3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-39 Score=364.31 Aligned_cols=256 Identities=29% Similarity=0.476 Sum_probs=187.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+++|++.+.||+|+||.||+|++..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 82 (278)
T 3cok_A 9 KIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFED------ 82 (278)
T ss_dssp SGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEEC------
T ss_pred ccccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEcc------
Confidence 35789999999999999999999999999999999964321 11224678999999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++||||+ ++|.+++... ..+++..++.++.||+.||+||
T Consensus 83 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l 128 (278)
T 3cok_A 83 ----------------------------------SNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYL 128 (278)
T ss_dssp ----------------------------------SSEEEEEEECCTTEEHHHHHHTCSSCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEecCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999996 5899988765 5699999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.+
T Consensus 129 H~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 192 (278)
T 3cok_A 129 HSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH---------------EKHYTLCGTPNYISPEIATR-SAHGLE 192 (278)
T ss_dssp HHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--------------------------------------------C
T ss_pred HHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCC---------------CcceeccCCCCcCCcchhcC-CCCCch
Confidence 99999999999999999999999999999998653211 01123579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|||||||++|+|++ ||...................| ...++++.+||.+||+.||.+|||+.++++|||+.+.
T Consensus 193 ~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~ 269 (278)
T 3cok_A 193 SDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYEMP---SFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRN 269 (278)
T ss_dssp THHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCCCC---TTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC--
T ss_pred hhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccCCc---cccCHHHHHHHHHHcccCHhhCCCHHHHhcCccccCC
Confidence 999999999999997 7765433332222222122222 3456799999999999999999999999999999875
Q ss_pred h
Q 001059 667 E 667 (1170)
Q Consensus 667 ~ 667 (1170)
.
T Consensus 270 ~ 270 (278)
T 3cok_A 270 S 270 (278)
T ss_dssp -
T ss_pred C
Confidence 4
|
| >3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-39 Score=376.84 Aligned_cols=265 Identities=24% Similarity=0.368 Sum_probs=201.9
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...+++|++.+.||+|+||+||+|+++.+|+.||||++..... ......+++..++.++||||++++++|...+.
T Consensus 19 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~-- 93 (360)
T 3e3p_A 19 RKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPR---FRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE-- 93 (360)
T ss_dssp HHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCTT---CCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS--
T ss_pred hhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCcc---ccHHHHHHHHHHHhcCCCCcccHHHhhhcccc--
Confidence 4457899999999999999999999999999999999864332 23456788888999999999999999865320
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL 506 (1170)
......++|+|||||+++|...+. ....+++..++.++.||+.||
T Consensus 94 -------------------------------~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al 142 (360)
T 3e3p_A 94 -------------------------------RDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSI 142 (360)
T ss_dssp -------------------------------SCTTCEEEEEEEECCSCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHH
T ss_pred -------------------------------ccccceeEEEEeecccccHHHHHHHHhhcccCCCHHHHHHHHHHHHHHH
Confidence 012345689999999998776554 455799999999999999999
Q ss_pred HHHH--hCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 507 AHIH--GQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 507 ~yLH--s~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||| ++||+||||||+|||++. ++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 143 ~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~ 206 (360)
T 3e3p_A 143 GCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE----------------PNVAYICSRYYRAPELIFGN 206 (360)
T ss_dssp HHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTS----------------CCCSTTSCGGGCCHHHHTTC
T ss_pred HHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCC----------------CcccccCCcceeCHHHHcCC
Confidence 9999 999999999999999997 8999999999998653211 12345789999999999775
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-----------------------------Ccccc
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-----------------------------PSWVA 631 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-----------------------------~~~~~ 631 (1170)
..++.++|||||||++|||++ ||...........+....+..+ .....
T Consensus 207 ~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (360)
T 3e3p_A 207 QHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLK 286 (360)
T ss_dssp SSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCT
T ss_pred CCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhcc
Confidence 668999999999999999997 8876665554444433211111 11112
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.++++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 287 ~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~ 322 (360)
T 3e3p_A 287 DAKEAYDLLSALLQYLPEERMKPYEALCHPYFDELH 322 (360)
T ss_dssp THHHHHHHHHHHTCSSGGGSCCHHHHTTSGGGGGGG
T ss_pred ccHHHHHHHHHHhccCccccCCHHHHhcCccccccC
Confidence 356899999999999999999999999999998764
|
| >1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.8e-39 Score=366.75 Aligned_cols=263 Identities=25% Similarity=0.379 Sum_probs=211.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc-cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNK-LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~-~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||+||+|++. .+|+.||||+++...........+.+|+.+++.+ +||||++++++|....
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~- 87 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR- 87 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE-
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecc-
Confidence 4578999999999999999999995 6789999999975443322234566788877776 8999999999874320
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL 506 (1170)
......+|+||||++++|.+++.... .+++..++.++.||+.||
T Consensus 88 ----------------------------------~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l 133 (326)
T 1blx_A 88 ----------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 133 (326)
T ss_dssp ----------------------------------CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cCCCceEEEEEecCCCCHHHHHHhcccCCCCHHHHHHHHHHHHHHH
Confidence 01346789999999999999997654 499999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+ ..+
T Consensus 134 ~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~ 196 (326)
T 1blx_A 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQ-SSY 196 (326)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG----------------GGCCCCCCCTTCCHHHHTT-CCC
T ss_pred HHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCC----------------CccccccccceeCHHHHhc-CCC
Confidence 99999999999999999999999999999999998653211 1234579999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC------------------------CCccccCCHHHHHH
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL------------------------PPSWVAKFSEQESL 639 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~------------------------p~~~~~~~~e~~~L 639 (1170)
+.++|||||||++|+|++ ||...........+....+.. .......++.+.+|
T Consensus 197 ~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 276 (326)
T 1blx_A 197 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL 276 (326)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHH
T ss_pred CcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHH
Confidence 999999999999999996 787665554444333211110 01123466789999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|.+||+.||.+|||+.++++||||....
T Consensus 277 i~~~L~~dP~~Rpt~~e~l~hp~~~~~~ 304 (326)
T 1blx_A 277 LLKCLTFNPAKRISAYSALSHPYFQDLE 304 (326)
T ss_dssp HHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHHHcCCCcccCCCHHHHhcCccccccc
Confidence 9999999999999999999999998764
|
| >2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-39 Score=361.30 Aligned_cols=255 Identities=25% Similarity=0.398 Sum_probs=204.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||.||+|.++.+|+.||||++..... .......+.+|+.+++.++||||+++++++..
T Consensus 9 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 82 (276)
T 2h6d_A 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVIST------ 82 (276)
T ss_dssp EETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC------
T ss_pred eeccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEec------
Confidence 45899999999999999999999999999999999975321 11234578899999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 83 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH 128 (276)
T 2h6d_A 83 ----------------------------------PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCH 128 (276)
T ss_dssp ----------------------------------SSEEEEEEECCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 356899999996 599999988888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.+....+.++
T Consensus 129 ~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~ 192 (276)
T 2h6d_A 129 RHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----------------FLRTSCGSPNYAAPEVISGRLYAGPEV 192 (276)
T ss_dssp HHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----------------------------CCTGGGTTSCCCHHHH
T ss_pred HCCCccCCCChhhEEECCCCCEEEeecccccccCCCc----------------ceecccCCccccCHHHHcCCCCCCccc
Confidence 9999999999999999999999999999998653211 112347999999999998754457899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||||+++|+|++ ||...................| ...++++.++|.+||+.||.+|||+.++++|+||.+.
T Consensus 193 Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~ 268 (276)
T 2h6d_A 193 DIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP---EYLNRSVATLLMHMLQVDPLKRATIKDIREHEWFKQD 268 (276)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTT
T ss_pred hHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc---hhcCHHHHHHHHHHccCChhhCCCHHHHHhChhhccC
Confidence 99999999999997 7766554444433333222233 2456789999999999999999999999999988654
|
| >3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-39 Score=385.19 Aligned_cols=260 Identities=25% Similarity=0.408 Sum_probs=190.2
Q ss_pred cCCceE-EeeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEE-LQPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~-~~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.+.|++ .++||+|+||+||+|+++ .+++.||||++..... ...+.+|+.+|+.++||||++++++|...
T Consensus 19 ~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~E~~~l~~l~hpniv~~~~~~~~~---- 90 (405)
T 3rgf_A 19 EDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGI----SMSACREIALLRELKHPNVISLQKVFLSH---- 90 (405)
T ss_dssp HHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSC----CHHHHHHHHHHHHCCCTTBCCCCEEEEET----
T ss_pred hhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCC----CHHHHHHHHHHHhcCCCCeeeEeeEEecC----
Confidence 345666 457999999999999977 5688999999864433 24688999999999999999999988542
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc---------CCCCHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY---------DHFDKELAWHLFRQ 501 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~---------~~l~e~~~~~i~~q 501 (1170)
....+|+|||||+++|.+++... ..+++..++.++.|
T Consensus 91 ----------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q 136 (405)
T 3rgf_A 91 ----------------------------------ADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136 (405)
T ss_dssp ----------------------------------TTTEEEEEEECCSEEHHHHHHHHHHHC-------CCHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEEeCCCCCHHHHHHHhccccccccccCCCHHHHHHHHHH
Confidence 24578999999999998887532 24999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
|+.||+|||++||+||||||+|||+ +.++.+||+|||+|+....... ........+||+.|+||
T Consensus 137 i~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~gt~~y~aP 204 (405)
T 3rgf_A 137 ILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLK------------PLADLDPVVVTFWYRAP 204 (405)
T ss_dssp HHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC----------------------------CCCTTCCH
T ss_pred HHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCCc------------ccccCCCceecCcccCc
Confidence 9999999999999999999999999 6778999999999987542210 01122456899999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHH---------HHHHHHhhhcCCCC-Cccc--------------
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER---------QIVLSDLKQKGELP-PSWV-------------- 630 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~---------~~~~~~l~~~~~~p-~~~~-------------- 630 (1170)
|++.+...++.++|||||||++|||++ ||...... .....+....+..+ ..|.
T Consensus 205 E~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~ 284 (405)
T 3rgf_A 205 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKD 284 (405)
T ss_dssp HHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHH
T ss_pred hhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhh
Confidence 999875669999999999999999997 77533221 11212211111111 1111
Q ss_pred --------------------cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 631 --------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 631 --------------------~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
..++++.+||++||+.||.+|||++++|+||||....
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~hp~f~~~~ 341 (405)
T 3rgf_A 285 FRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQDPYFLEDP 341 (405)
T ss_dssp CCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTSSS
T ss_pred ccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhccCC
Confidence 1145788999999999999999999999999998754
|
| >1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-39 Score=368.16 Aligned_cols=254 Identities=24% Similarity=0.360 Sum_probs=205.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEE-ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCC------ceeEEEEEe
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH------VVRYYQAWF 424 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~-~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hpn------IV~l~~~~~ 424 (1170)
...++|++.+.||+|+||+||+|.+ +.+|+.||||+++. .......+.+|+.+++.++|+| |++++++|.
T Consensus 11 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~ 87 (339)
T 1z57_A 11 VLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKN---VDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFE 87 (339)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEE
T ss_pred CccCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEec---CCchhHHHHHHHHHHHHhhhcCCCCceeeEeeecccc
Confidence 4457999999999999999999998 56899999999863 2344567889999999997765 899998873
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~qI 502 (1170)
. ...+|+|||||+++|.+++.... .+++..++.++.||
T Consensus 88 ~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi 127 (339)
T 1z57_A 88 H----------------------------------------HGHICIVFELLGLSTYDFIKENGFLPFRLDHIRKMAYQI 127 (339)
T ss_dssp E----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHHHH
T ss_pred c----------------------------------------CCcEEEEEcCCCCCHHHHHHhcCCCCCcHHHHHHHHHHH
Confidence 3 35789999999989999998765 68999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeecC-------------------CCCEEEeecCcchhccccccccCCCCCCCCCCccc
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFDA-------------------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 563 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~~-------------------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 563 (1170)
+.||+|||++||+||||||+|||++. ++.+||+|||+++....
T Consensus 128 ~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~------------------ 189 (339)
T 1z57_A 128 CKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSATYDDE------------------ 189 (339)
T ss_dssp HHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCEEECCCSSCEETTS------------------
T ss_pred HHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCceEeeCcccccCcc------------------
Confidence 99999999999999999999999987 66899999999975321
Q ss_pred cCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc-----------
Q 001059 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW----------- 629 (1170)
Q Consensus 564 ~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~----------- 629 (1170)
.....+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.........+..|..+
T Consensus 190 ~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 268 (339)
T 1z57_A 190 HHSTLVSTRHYRAPEVILA-LGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFH 268 (339)
T ss_dssp CCCSSCSCGGGCCHHHHTT-SCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEE
T ss_pred ccccccCCccccChHHhhC-CCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHh
Confidence 1134579999999999987 568999999999999999997 7765554443322222222222110
Q ss_pred ------------------------------ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 630 ------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 630 ------------------------------~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...++++.+||.+||+.||.+|||+.++++||||....
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 336 (339)
T 1z57_A 269 HDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREALKHPFFDLLK 336 (339)
T ss_dssp TTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGGG
T ss_pred hccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHHhcCHHHHHHh
Confidence 11235688999999999999999999999999998764
|
| >3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-39 Score=370.47 Aligned_cols=254 Identities=20% Similarity=0.326 Sum_probs=203.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||+++.. ....+.+|+.+|+.++ ||||+++++++.+.
T Consensus 34 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~----- 103 (330)
T 3nsz_A 34 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDP----- 103 (330)
T ss_dssp EGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT-----
T ss_pred CCCceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc-----chHHHHHHHHHHHHcCCCCCEEEeeeeeccC-----
Confidence 357899999999999999999999999999999998632 2467899999999997 99999999987432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.....+++||||+ ++|.+++. .+++..++.++.||+.||+|||
T Consensus 104 ---------------------------------~~~~~~lv~e~~~~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH 147 (330)
T 3nsz_A 104 ---------------------------------VSRTPALVFEHVNNTDFKQLYQ---TLTDYDIRFYMYEILKALDYCH 147 (330)
T ss_dssp ---------------------------------TTCCEEEEEECCCCCCHHHHGG---GCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceEEEEeccCchhHHHHHH---hCCHHHHHHHHHHHHHHHHHHH
Confidence 2356799999997 58888775 3899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
++||+||||||+|||++.++ .+||+|||+|+...... ......||+.|+|||++.+...++.+
T Consensus 148 ~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~ 211 (330)
T 3nsz_A 148 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYS 211 (330)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTC----------------CCCSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred hCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCC----------------ccccccccccccChhhhcCCCcCCch
Confidence 99999999999999999776 89999999998653211 12345799999999999876678999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHH-HHHHHHh------------h-hcCCCC---------------------Ccccc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMER-QIVLSDL------------K-QKGELP---------------------PSWVA 631 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~-~~~~~~l------------~-~~~~~p---------------------~~~~~ 631 (1170)
+|||||||++|+|++ ||...... ....... . .....+ .....
T Consensus 212 ~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (330)
T 3nsz_A 212 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL 291 (330)
T ss_dssp HHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGG
T ss_pred hhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhcccccccc
Confidence 999999999999996 77432211 1111100 0 001111 11222
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
.++++.+||++||+.||.+|||++++|+||||.....
T Consensus 292 ~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~~ 328 (330)
T 3nsz_A 292 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 328 (330)
T ss_dssp CCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC-
T ss_pred CCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhcc
Confidence 5789999999999999999999999999999998754
|
| >2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6e-39 Score=376.44 Aligned_cols=256 Identities=24% Similarity=0.346 Sum_probs=206.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CC-----CceeEEEEE
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQ-----HVVRYYQAW 423 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-Hp-----nIV~l~~~~ 423 (1170)
...+.++|++.+.||+|+||+||+|+++.+|+.||||+++. .......+.+|+.+++.++ |+ +|++++++|
T Consensus 49 ~~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~ 125 (382)
T 2vx3_A 49 GEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKN---KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF 125 (382)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECS---SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE
T ss_pred CCEeeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEec---cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee
Confidence 45567899999999999999999999999999999999963 2334567788999998885 55 488988887
Q ss_pred eecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHH
Q 001059 424 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQ 501 (1170)
Q Consensus 424 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~q 501 (1170)
.. ...+|+|||||+++|.+++... ..+++..++.++.|
T Consensus 126 ~~----------------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 165 (382)
T 2vx3_A 126 MF----------------------------------------RNHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKFAQQ 165 (382)
T ss_dssp EE----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTSCCCHHHHHHHHHH
T ss_pred cc----------------------------------------CCceEEEEecCCCCHHHHHhhcCcCCCCHHHHHHHHHH
Confidence 43 3578999999999999999765 46999999999999
Q ss_pred HHHHHHHHH--hCCccccCCCCCceeec--CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 502 IVEGLAHIH--GQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 502 I~~gL~yLH--s~gIiHrDLKp~NILi~--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
|+.||.||| ..||+||||||+|||++ .++.+||+|||+|+..... ....+||+.|+||
T Consensus 166 i~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~------------------~~~~~~t~~y~aP 227 (382)
T 2vx3_A 166 MCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQR------------------IYQYIQSRFYRSP 227 (382)
T ss_dssp HHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCC------------------CCSSCSCGGGCCH
T ss_pred HHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceecccc------------------cccccCCccccCh
Confidence 999999999 47999999999999995 4678999999999864211 2345899999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccc------------------------
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWV------------------------ 630 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~------------------------ 630 (1170)
|++.+ ..++.++|||||||++|||++ ||......+....+....+..|....
T Consensus 228 E~~~~-~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (382)
T 2vx3_A 228 EVLLG-MPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKTK 306 (382)
T ss_dssp HHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHTTCTTHHHHEEECTTSCEEECCCC
T ss_pred HHHcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhHHHHHHHHhcccccccccccc
Confidence 99988 568999999999999999997 88766655544444332221111000
Q ss_pred -------------------------------------cCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 631 -------------------------------------AKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 631 -------------------------------------~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
...+++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 307 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~Rpta~e~L~hp~f~~~~ 380 (382)
T 2vx3_A 307 DGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKKTA 380 (382)
T ss_dssp TTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTTSCCHHHHTTSGGGCC--
T ss_pred ccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhhCCCHHHHhcCcccccCC
Confidence 0013688999999999999999999999999998754
|
| >2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-39 Score=370.95 Aligned_cols=256 Identities=26% Similarity=0.411 Sum_probs=215.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|.+.+.||+|+||.||+|++..+++.||+|++..... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 38 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~----- 112 (335)
T 2owb_A 38 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----- 112 (335)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred ccCCceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 445789999999999999999999999999999999975532 33455678999999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++||||+ ++|.+++.....+++.+++.++.||+.||+||
T Consensus 113 -----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~L 157 (335)
T 2owb_A 113 -----------------------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 157 (335)
T ss_dssp -----------------------------------SSEEEEEECCCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCeEEEEEecCCCCCHHHHHhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 457899999997 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.+
T Consensus 158 H~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~ 221 (335)
T 2owb_A 158 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------------ERKKVLCGTPNYIAPEVLSK-KGHSFE 221 (335)
T ss_dssp HHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCCSSCCHHHHHT-SCBCTH
T ss_pred HHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCc---------------ccccccCCCccccCHHHhcc-CCCCch
Confidence 99999999999999999999999999999998653111 01234579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
+|||||||++|+|++ ||......+...........++. ..++++.+||++||+.||.+|||+.++++|+||...
T Consensus 222 ~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~ 298 (335)
T 2owb_A 222 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSG 298 (335)
T ss_dssp HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTS
T ss_pred hhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCCc---cCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence 999999999999997 78766555554444443333333 456789999999999999999999999999987643
|
| >2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-39 Score=361.72 Aligned_cols=255 Identities=26% Similarity=0.417 Sum_probs=214.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|.+.+.||+|+||+||+|.+..+++.||+|++..... .....+.+.+|+.+++.++||||+++++++.+
T Consensus 12 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----- 86 (294)
T 2rku_A 12 RSRRRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFED----- 86 (294)
T ss_dssp TTTEEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC-----
T ss_pred CcccceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeecc-----
Confidence 345789999999999999999999999999999999976542 33455678999999999999999999998732
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|++||||+ ++|.+++.....+++..++.++.||+.||+||
T Consensus 87 -----------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~l 131 (294)
T 2rku_A 87 -----------------------------------NDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYL 131 (294)
T ss_dssp -----------------------------------SSEEEEEEECCTTCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 456899999997 59999998888899999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++...... .......||+.|+|||++.+ ..++.+
T Consensus 132 H~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~ 195 (294)
T 2rku_A 132 HRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDG---------------ERKKVLCGTPNYIAPEVLSK-KGHSFE 195 (294)
T ss_dssp HHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCCSSCCHHHHTT-SCBCTH
T ss_pred HHCCccccCCChHhEEEcCCCCEEEEeccCceecccCc---------------cccccccCCCCcCCcchhcc-CCCCch
Confidence 99999999999999999999999999999998643111 01233579999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
+||||||+++|+|++ ||......+............|. ..++.+.++|.+||+.||.+|||+.++++|+|+..
T Consensus 196 ~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~ 271 (294)
T 2rku_A 196 VDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIPK---HINPVAASLIQKMLQTDPTARPTINELLNDEFFTS 271 (294)
T ss_dssp HHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHT
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCcc---ccCHHHHHHHHHHcccChhhCcCHHHHhhChheec
Confidence 999999999999997 77766555554444433333333 45678999999999999999999999999998754
|
| >3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-39 Score=373.22 Aligned_cols=262 Identities=22% Similarity=0.326 Sum_probs=204.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC---------hhhHHHHHHHHHHHHhccCCCceeEEEEEe
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS---------LPVNDRILREVATLSRLQHQHVVRYYQAWF 424 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~---------~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~ 424 (1170)
.++|++.+.||+|+||.||+|.+. +|+.||||++...... ....+.+.+|+.+|+.++||||++++++|.
T Consensus 21 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~ 99 (362)
T 3pg1_A 21 QSPYTVQRFISSGSYGAVCAGVDS-EGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFV 99 (362)
T ss_dssp TCSCEEEEEEEEETTEEEEEEECT-TSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEE
T ss_pred ccceEEeEEeccCCCEEEEEEECC-CCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEE
Confidence 478999999999999999999987 4999999998654322 112367999999999999999999999885
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~ 503 (1170)
... ......+|+|||||+++|.+.+.... .+++..++.++.||+
T Consensus 100 ~~~-----------------------------------~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~ 144 (362)
T 3pg1_A 100 HFE-----------------------------------EPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHIL 144 (362)
T ss_dssp ECC-----------------------------------TTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHHHHHH
T ss_pred ecc-----------------------------------CCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHHHHHH
Confidence 421 01245789999999999998887544 699999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||+|||++||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.+.
T Consensus 145 ~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~ 208 (362)
T 3pg1_A 145 LGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADA----------------NKTHYVTHRWYRAPELVMQF 208 (362)
T ss_dssp HHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC-------------------------------CGGGCCHHHHTTC
T ss_pred HHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCccccccccc----------------ccceecccceecCcHHhcCC
Confidence 99999999999999999999999999999999999997532211 12345799999999998875
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC------------------------C-----Ccccc
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL------------------------P-----PSWVA 631 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~------------------------p-----~~~~~ 631 (1170)
..++.++|||||||++|+|++ ||......+....+....+.. + .....
T Consensus 209 ~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (362)
T 3pg1_A 209 KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPT 288 (362)
T ss_dssp TTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTT
T ss_pred CCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCC
Confidence 678999999999999999997 887655444433332211110 0 01234
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.++.+.+||.+||+.||.+|||+.++++||||....
T Consensus 289 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 324 (362)
T 3pg1_A 289 ADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLF 324 (362)
T ss_dssp SCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTC
T ss_pred CCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhcc
Confidence 467899999999999999999999999999998763
|
| >3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-40 Score=390.84 Aligned_cols=272 Identities=15% Similarity=0.138 Sum_probs=199.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHH---HHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREV---ATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev---~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++.+.||+|+||+||+|+++.+|+.||||+++... ......+.+.+|+ ..|+.++|||||+++++|....-
T Consensus 72 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~- 150 (377)
T 3byv_A 72 PRTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFD- 150 (377)
T ss_dssp CEEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSE-
T ss_pred CceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhh-
Confidence 368999999999999999999999899999999998553 2334567889999 55555689999999855432100
Q ss_pred ccCCCCCCCCCcccccccccccccc-cccccccccccccEEEEEeeccCCcHHHHHHhcCCCCH-------HHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASS-ADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDK-------ELAWHLFRQ 501 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e-------~~~~~i~~q 501 (1170)
.+....... ...........-...|++||||+|+|.+++...+.+++ ..++.++.|
T Consensus 151 ----------------~~~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~q 214 (377)
T 3byv_A 151 ----------------LVKDPQKKKMIRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQ 214 (377)
T ss_dssp ----------------EEECTTSCSEEEC------CEEESEEEEEECCSEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHH
T ss_pred ----------------hhhccCCccccccccCCCceEEEEEEEEEeccCCCHHHHHHhccccccccccccHHHHHHHHHH
Confidence 000000000 00000000001124799999999999999987655555 788889999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+.||+|||++||+||||||+|||++.++.+||+|||+|+.... ..+..+| +.|+|||++.
T Consensus 215 i~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~------------------~~~~~~g-~~y~aPE~~~ 275 (377)
T 3byv_A 215 VIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGA------------------RVVSSVS-RGFEPPELEA 275 (377)
T ss_dssp HHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTC------------------EEECCCC-TTCCCHHHHH
T ss_pred HHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEechhheecCC------------------cccCCCC-cCccChhhhc
Confidence 99999999999999999999999999999999999999985321 1134567 9999999998
Q ss_pred CC----------CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 001059 582 GW----------PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 582 ~~----------~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 648 (1170)
+. ..++.++|||||||++|||++ ||........... ....+...++++.+||.+||+.||
T Consensus 276 ~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~-------~~~~~~~~~~~~~~li~~~L~~dp 348 (377)
T 3byv_A 276 RRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEW-------IFRSCKNIPQPVRALLEGFLRYPK 348 (377)
T ss_dssp HHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGG-------GGSSCCCCCHHHHHHHHHHTCSSG
T ss_pred ccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhh-------hhhhccCCCHHHHHHHHHHcCCCc
Confidence 73 168999999999999999997 7754332211111 111224567899999999999999
Q ss_pred CCCCCHHHHHhccCCCCchH
Q 001059 649 SDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 649 ~~RPta~eiL~~~~~~~~~~ 668 (1170)
.+|||+.++++||||.+...
T Consensus 349 ~~Rpt~~e~l~hp~f~~~~~ 368 (377)
T 3byv_A 349 EDRLLPLQAMETPEYEQLRT 368 (377)
T ss_dssp GGCCCHHHHHTSHHHHHHHH
T ss_pred hhCCCHHHHhhChHHHHHHH
Confidence 99999999999999876543
|
| >2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-39 Score=372.03 Aligned_cols=261 Identities=23% Similarity=0.368 Sum_probs=206.3
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------hhhHHHHHHHHHHHHhccCCCceeEEEEEe
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------LPVNDRILREVATLSRLQHQHVVRYYQAWF 424 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~------~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~ 424 (1170)
....++|++.+.||+|+||.||+|+++.+|+.||||++...... ......+.+|+.+|+.++||||+++++++.
T Consensus 6 ~~l~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 85 (322)
T 2ycf_A 6 KALRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD 85 (322)
T ss_dssp HHHHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEE
T ss_pred hhhhhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEc
Confidence 34557899999999999999999999999999999999654321 112345889999999999999999998872
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~ 503 (1170)
. ..+|+|||||++ +|.+++.....+++..++.++.||+
T Consensus 86 ~-----------------------------------------~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~ 124 (322)
T 2ycf_A 86 A-----------------------------------------EDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQML 124 (322)
T ss_dssp S-----------------------------------------SSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHHHHHH
T ss_pred C-----------------------------------------CceEEEEecCCCCcHHHHHhccCCCCHHHHHHHHHHHH
Confidence 1 226999999975 9999998888899999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
.||+|||++||+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++
T Consensus 125 ~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~ 188 (322)
T 2ycf_A 125 LAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETS----------------LMRTLCGTPTYLAPEVL 188 (322)
T ss_dssp HHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCH----------------HHHHHHSCCTTCCHHHH
T ss_pred HHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceeccccc----------------ccccccCCcCccCchhh
Confidence 9999999999999999999999987654 9999999998653211 11235799999999997
Q ss_pred c--CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh-hcCCC-CCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 581 Q--GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGEL-PPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 581 ~--~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~-~~~~~-p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
. +...++.++|||||||++|+|++ ||............+. ..... +..+...++++.+||++||+.||.+|||
T Consensus 189 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps 268 (322)
T 2ycf_A 189 VSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFT 268 (322)
T ss_dssp HHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCC
T ss_pred ccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCC
Confidence 4 23568999999999999999997 7754432211112121 12222 2334567789999999999999999999
Q ss_pred HHHHHhccCCCCchH
Q 001059 654 ATELLQDALPPQMEY 668 (1170)
Q Consensus 654 a~eiL~~~~~~~~~~ 668 (1170)
+.++++|+|+.....
T Consensus 269 ~~~~l~h~~~~~~~~ 283 (322)
T 2ycf_A 269 TEEALRHPWLQDEDM 283 (322)
T ss_dssp HHHHHTSGGGCCHHH
T ss_pred HHHHhhCcCcCCHHH
Confidence 999999999987653
|
| >1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.7e-39 Score=374.68 Aligned_cols=262 Identities=26% Similarity=0.408 Sum_probs=209.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeec
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRL-QHQHVVRYYQAWFET 426 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~ 426 (1170)
..++|++.+.||+|+||+||+|++. .+|+.||||+++.... .......+.+|+.+|+.+ +||||++++++|..
T Consensus 52 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~- 130 (355)
T 1vzo_A 52 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT- 130 (355)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-
T ss_pred cccceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEee-
Confidence 3579999999999999999999994 5899999999864321 112234577899999999 69999999988733
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||+ ++|.+++.....+++..++.++.||+.|
T Consensus 131 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~a 171 (355)
T 1vzo_A 131 ---------------------------------------ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 171 (355)
T ss_dssp ---------------------------------------TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CceEEEEeecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 356899999997 5999999988899999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-C
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-P 584 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~ 584 (1170)
|+|||++||+||||||+|||++.++.+||+|||+++....... ......+||+.|+|||++.+. .
T Consensus 172 L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~~~~ 237 (355)
T 1vzo_A 172 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--------------ERAYDFCGTIEYMAPDIVRGGDS 237 (355)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG--------------GGGCGGGSCCTTCCHHHHTTCC-
T ss_pred HHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCC--------------CcccCcccCcCccChhhhcCCCC
Confidence 9999999999999999999999999999999999986532211 112345799999999999862 3
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchh----HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAM----ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP----- 652 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~----~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP----- 652 (1170)
.++.++|||||||++|||++ ||.... ............. +.....++.+.+||.+||..||.+||
T Consensus 238 ~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~ 314 (355)
T 1vzo_A 238 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP---PYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 314 (355)
T ss_dssp --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCC---CCCTTSCHHHHHHHHHHTCSSGGGSTTSSTT
T ss_pred CCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCC---CCCcccCHHHHHHHHHHhhhCHHHhcCCCCC
Confidence 47899999999999999997 775322 1222222222222 23345667899999999999999999
Q ss_pred CHHHHHhccCCCCchHHHH
Q 001059 653 SATELLQDALPPQMEYELL 671 (1170)
Q Consensus 653 ta~eiL~~~~~~~~~~~~~ 671 (1170)
++.++++|+||....+..+
T Consensus 315 s~~ell~h~~f~~~~~~~l 333 (355)
T 1vzo_A 315 DADEIKEHLFFQKINWDDL 333 (355)
T ss_dssp THHHHHTSGGGTTCCHHHH
T ss_pred CHHHHHcCcchhcCChhHh
Confidence 9999999999998876543
|
| >2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-39 Score=360.46 Aligned_cols=259 Identities=29% Similarity=0.526 Sum_probs=216.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.+.++|++.+.||+|+||.||+|+++.+|+.||||++............+.+|+.++++++||||+++++++.+
T Consensus 17 ~~~~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~---- 92 (287)
T 2wei_A 17 QGTFAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILED---- 92 (287)
T ss_dssp THHHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred HHHHhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeC----
Confidence 4566789999999999999999999999999999999997654444456789999999999999999999988732
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|++|||++ ++|.+.+.....+++..++.++.||+.||+|
T Consensus 93 ------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~ 136 (287)
T 2wei_A 93 ------------------------------------SSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITY 136 (287)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeEEEEEEccCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Confidence 356899999996 5999999888889999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCC---CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDAR---NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~---~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++||+||||||+|||++.+ +.+||+|||++....... ......||+.|+|||++.+ .
T Consensus 137 LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~--~ 198 (287)
T 2wei_A 137 MHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT----------------KMKDRIGTAYYIAPEVLRG--T 198 (287)
T ss_dssp HHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCS----------------SCSCHHHHHTTCCHHHHTT--C
T ss_pred HHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCC----------------ccccccCcccccChHHhcC--C
Confidence 999999999999999999764 479999999998653211 1133468999999999986 4
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++.++||||||+++|+|++ ||......+............+ +.+...++++.++|++||+.||.+|||+.++++||
T Consensus 199 ~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~hp 278 (287)
T 2wei_A 199 YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHP 278 (287)
T ss_dssp CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHSH
T ss_pred CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhcCH
Confidence 8999999999999999997 7776655554444333332222 34456788999999999999999999999999999
Q ss_pred CCCCc
Q 001059 662 LPPQM 666 (1170)
Q Consensus 662 ~~~~~ 666 (1170)
|+.+.
T Consensus 279 ~~~~~ 283 (287)
T 2wei_A 279 WIQKY 283 (287)
T ss_dssp HHHHH
T ss_pred HHhcc
Confidence 87643
|
| >3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-38 Score=360.72 Aligned_cols=255 Identities=25% Similarity=0.422 Sum_probs=205.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+..+|+.||||++.... ....+.+|+.+++.++||||+++++++..
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~----~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 95 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES----DLQEIIKEISIMQQCDSPHVVKYYGSYFK------- 95 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS----CCHHHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH----HHHHHHHHHHHHHhCCCCCCccEEEEEEe-------
Confidence 3578999999999999999999999999999999997543 23578899999999999999999998743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHH-hcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFE-SYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~-~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||++ +|.+++. ....+++..++.++.||+.||.|||
T Consensus 96 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 142 (314)
T 3com_A 96 ---------------------------------NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLH 142 (314)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEeecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3567999999975 9999886 4567999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++
T Consensus 143 ~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 206 (314)
T 3com_A 143 FMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTM---------------AKRNTVIGTPFWMAPEVIQE-IGYNCVA 206 (314)
T ss_dssp HTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTB---------------SCBCCCCSCGGGCCHHHHSS-SCBCTTH
T ss_pred hCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhc---------------cccCccCCCCCccChhhcCC-CCCCccc
Confidence 9999999999999999999999999999997653211 01234579999999999987 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|||||||++|+|++ ||..........................++.+.+||.+||+.||.+|||+.++++|+|+....
T Consensus 207 Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~ 286 (314)
T 3com_A 207 DIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAK 286 (314)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCC
T ss_pred cHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCC
Confidence 99999999999997 776655444433332222222223344677999999999999999999999999999987654
|
| >3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-40 Score=383.70 Aligned_cols=282 Identities=16% Similarity=0.211 Sum_probs=193.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhc--cCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRL--QHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l--~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+|++.+.||+|+||+||+|+++.+|+.||||++..... .....+.+.+|+.+++.+ +||||++++..+..+.
T Consensus 62 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~---- 137 (371)
T 3q60_A 62 RKLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPS---- 137 (371)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCC----
T ss_pred eeeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeee----
Confidence 469999999999999999999999999999999987654 233455677886555555 5999998774442110
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHH------HHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELA------WHLFRQIVE 504 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~------~~i~~qI~~ 504 (1170)
+.....|. .................+|+|||||+++|.+++...+ .+.+... +.++.||+.
T Consensus 138 --d~~~~~~~----------~~~~~~~~~~~~~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~~~vk~~i~~qi~~ 205 (371)
T 3q60_A 138 --DAVAVQSQ----------PPFAQLSPGQDDYAVANYLLLMPAASVDLELLFSTLDFVYVFRGDEGILALHILTAQLIR 205 (371)
T ss_dssp --EEEEETTS----------CSSSBCSCC---CCEEEEEEEECCCSEEHHHHHHHHHHSCCCCHHHHHHHHHHHHHHHHH
T ss_pred --hheecCCC----------CCeeeccCCcccceeeeEEEEecCCCCCHHHHHHHhccccchhhhhhhhhHHHHHHHHHH
Confidence 00000000 0000000000011235689999999999999997643 3444445 577799999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW- 583 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~- 583 (1170)
||+|||++||+||||||+|||++.++.+||+|||+|+..... .....+|+.|+|||++.+.
T Consensus 206 aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DFG~a~~~~~~------------------~~~~~~t~~y~aPE~~~~~~ 267 (371)
T 3q60_A 206 LAANLQSKGLVHGHFTPDNLFIMPDGRLMLGDVSALWKVGTR------------------GPASSVPVTYAPREFLNAST 267 (371)
T ss_dssp HHHHHHHTTEEETTCSGGGEEECTTSCEEECCGGGEEETTCE------------------EEGGGSCGGGCCHHHHTCSE
T ss_pred HHHHHHHCCCccCcCCHHHEEECCCCCEEEEecceeeecCCC------------------ccCccCCcCCcChhhccCCC
Confidence 999999999999999999999999999999999999864311 1134677999999999752
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHH-----Hhh-hcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS-----DLK-QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~-----~l~-~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
..++.++|||||||++|||++ ||........... ... ......+.+...++++.+||.+||+.||.+|||+
T Consensus 268 ~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 347 (371)
T 3q60_A 268 ATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP 347 (371)
T ss_dssp EECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCCSCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCH
T ss_pred CCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhccccccchhhccCCCHHHHHHHHHHcCCChhhCCCH
Confidence 358999999999999999997 7765432110000 000 0011122334678899999999999999999999
Q ss_pred HHHHhccCCCCchHHH
Q 001059 655 TELLQDALPPQMEYEL 670 (1170)
Q Consensus 655 ~eiL~~~~~~~~~~~~ 670 (1170)
.++|+||||.+..+..
T Consensus 348 ~e~l~hp~f~~~~~~~ 363 (371)
T 3q60_A 348 LEAMETPEFLQLQNEI 363 (371)
T ss_dssp HHHTTSHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHH
Confidence 9999999998776553
|
| >4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-39 Score=365.55 Aligned_cols=254 Identities=22% Similarity=0.363 Sum_probs=201.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|+++.+|+.||||+++.... ....+.+.+|+.+|+.++||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------ 79 (319)
T 4euu_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------ 79 (319)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------
T ss_pred CCCCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCcceEEEEeecC------
Confidence 34689999999999999999999999999999999974332 22356788999999999999999999987432
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||+ ++|.+++..... +++..++.++.||+.||+|
T Consensus 80 --------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~ 127 (319)
T 4euu_A 80 --------------------------------TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127 (319)
T ss_dssp --------------------------------TTCCEEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHH
Confidence 2346799999996 699999976543 9999999999999999999
Q ss_pred HHhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--
Q 001059 509 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-- 582 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-- 582 (1170)
||++||+||||||+|||+ +.++.+||+|||+++...... ......||+.|+|||++..
T Consensus 128 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 191 (319)
T 4euu_A 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------QFVSLYGTEEYLHPDMYERAV 191 (319)
T ss_dssp HHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHHT
T ss_pred HHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCC----------------ceeecccCCCccCHHHhhhcc
Confidence 999999999999999999 777889999999998653221 1234579999999999862
Q ss_pred -----CCCCCccchhHHHHHHHHHhhc---CCCch----hHHHHHHHHhhhcCC-------------------CCC---c
Q 001059 583 -----WPKIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLKQKGE-------------------LPP---S 628 (1170)
Q Consensus 583 -----~~~~~~ksDIwSlGviL~ELlt---Pf~~~----~~~~~~~~~l~~~~~-------------------~p~---~ 628 (1170)
...++.++|||||||++|||++ ||... ...+.....+..... .+. .
T Consensus 192 ~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (319)
T 4euu_A 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSL 271 (319)
T ss_dssp SCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSS
T ss_pred ccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCCCcccchhhhcccCCccccCccCCccccc
Confidence 2568999999999999999997 77532 223333333332221 111 1
Q ss_pred cccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 629 ~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
....++.+.+||++||+.||.+|||++|+|+|+
T Consensus 272 ~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~ 304 (319)
T 4euu_A 272 SRGLQVLLTPVLANILEADQEKCWGFDQFFAET 304 (319)
T ss_dssp CHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHH
T ss_pred chhHHHHhHHHHHHhccCChhhhccHHHhhhcc
Confidence 112234678999999999999999999999996
|
| >2i4l_A Proline-tRNA ligase; alpha beta; 2.00A {Rhodopseudomonas palustris} PDB: 2i4m_A* 2i4n_A* 2i4o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.7e-41 Score=404.23 Aligned_cols=372 Identities=10% Similarity=0.020 Sum_probs=269.9
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC--CcccccceEEEeccCCceeeecC---CC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD--CPQFKRNTVKLLTHGGDLLELSH---EL 783 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~--~~~~~~~my~f~D~~G~~laLRP---D~ 783 (1170)
+.+.|++||+|.+++++++|++.+++.|.++||++|.||+| ++... .+.+.++||+|.|++|+.++||| |+
T Consensus 54 ~~~~G~~d~lP~g~~~~~~i~~~ir~~~~~~G~~ei~tP~l~~~el~~~sg~~d~~~~em~~~~d~~~~~~~LrPt~ee~ 133 (458)
T 2i4l_A 54 QEAAGIYAWLPLGHRVLKKIEQIVREEQNRAGAIELLMPTLQLADLWRESGRYDAYGPEMLRIADRHKRELLYGPTNEEM 133 (458)
T ss_dssp EEETTEEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHTHHHHSCTTSEEEECTTCCEEEECSCCHHH
T ss_pred ccCCcceEECCCHHHHHHHHHHHHHHHHHHcCCEEEEcCccCcHHHHHhcCCccccccceEEEEeCCCCeEEECCCChHH
Confidence 45899999999999999999999999999999999999999 22222 34678999999999999999999 89
Q ss_pred CHHHHHHHHh-CCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHHHHH---HHHHHHHcCCCcc
Q 001059 784 RLPFIRWAIS-NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKV---TMDIVTRFFHAES 855 (1170)
Q Consensus 784 T~~iaR~~~~-~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvi~l---a~~~l~~lgi~~~ 855 (1170)
|++++|..+. ++..|+|+||+|+|||+| +|+. |.|||+|+|+|+||.++..+|+|++.+ +.+++++||++
T Consensus 134 t~~i~r~~~~s~~~lP~rl~~ig~~fR~E~~p~~Gl~R~REF~q~d~~~f~~~~~~ad~e~~~~~~~~~~i~~~lGl~-- 211 (458)
T 2i4l_A 134 ITEIFRAYIKSYKSLPLNLYHIQWKFRDEQRPRFGVMRGREFLMKDAYSFDVDEAGARKSYNKMFVAYLRTFARMGLK-- 211 (458)
T ss_dssp HHHHHHHHCCBGGGCSEEEEEEEEEECCCSSCBTGGGBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTTTCC--
T ss_pred HHHHHHHHHhhccccCeeeEEecCEeeCCCCCCCCcccccceEEeEEEEEECCHHHHHHHHHHHHHHHHHHHHHcCCc--
Confidence 9999998765 456799999999999999 8875 457799999999999888999998755 99999999995
Q ss_pred eEEEeCcHHHHHHHHHHh-----CCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHH
Q 001059 856 CDIHLNHGDLLEAIWSWA-----GIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGL 930 (1170)
Q Consensus 856 ~~i~lg~~~il~~~l~~l-----gl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~ 930 (1170)
+.+.+++++.+.+.+... ...++.. ..+......+ ... . +.. +.+ .+..+
T Consensus 212 ~~~~~~~~g~~gg~~s~e~~~l~~~ged~i-~~~~~~~~~n-~~~--~--------------~~~-~~~----~l~~~-- 266 (458)
T 2i4l_A 212 AIPMRAETGPIGGDLSHEFIVLAETGESGV-YIDRDVLNLP-VPD--E--------------NVD-YDG----DLTPI-- 266 (458)
T ss_dssp EEEEECCCCSSCSSCEEEEEEECTTCSEEE-EEEGGGGGCC-CCC--T--------------TCC-TTS----CCHHH--
T ss_pred eEEEEccccccCCccchhhhhhhhcCcceE-EecccccccC-HHH--H--------------hcc-ccH----hHHHH--
Confidence 999999987654433210 1111000 0000000000 000 0 000 000 00001
Q ss_pred HhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecc
Q 001059 931 RFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAV 1010 (1170)
Q Consensus 931 ~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~ 1010 (1170)
++.+..+...++.. .+.+ ..+ + ..+.+|++++||++ ||++|++ +.. .+++.
T Consensus 267 ---------l~~~~~~~~~~~~~--~~g~-~~~--~--~~~~~~l~~~rgl~--~G~iFel---g~~--------~s~~~ 317 (458)
T 2i4l_A 267 ---------IKQWTSVYAATEDV--HEPA-RYE--S--EVPEANRLNTRGIE--VGQIFYF---GTK--------YSDSM 317 (458)
T ss_dssp ---------HHHHHHSCEEETTT--CCTT-HHH--H--HSCTTTEEEEEEEE--EEEEEEE---ETH--------HHHHT
T ss_pred ---------HhcCchhhhcChhh--cccc-ccc--C--CCCCcCceeeeeec--cCcEEEe---ccc--------ccccC
Confidence 11000000000000 0000 000 0 13557899999999 9999998 222 37999
Q ss_pred ccccchhhhhcccccccccCCCCCCCC--ceEEeccHHHHHhhcc-C-----CCCCCCCCCCceEEEEEcC--CCccHHH
Q 001059 1011 GGRYDYLLHRMWDREYVGYASRTNPPS--GVGASLALETIIQHYP-V-----DFKPVRNEAGTSVLVCSRG--GGGLLVE 1080 (1170)
Q Consensus 1011 GGRYD~L~~~fg~~~~~~~~g~~~~~p--AvGfaiglerL~~~L~-~-----~~~~~~~~~~~~vlv~~~~--~~~~~~~ 1080 (1170)
||||++. +|. +.| ++|||||+|||+.+|. + +...+...+|.+|+|++.+ ++.....
T Consensus 318 g~ry~~~---~G~-----------~~p~~~~gfgiGveRli~al~e~~~d~~g~~~p~~~ap~~v~vi~~~~~~~~~~~~ 383 (458)
T 2i4l_A 318 KANVTGP---DGT-----------DAPIHGGSYGVGVSRLLGAIIEACHDDNGIIWPEAVAPFRVTILNLKQGDAATDAA 383 (458)
T ss_dssp TCEEECT---TSC-----------EEECEEEEEEEEHHHHHHHHHHHSEETTEECCCTTTCSCSEEEEESSTTCHHHHHH
T ss_pred CcEEECC---CCC-----------EeceEEeeecccHHHHHHHHHHhhccccCCcCCcccCCceEEEEecCCCCHHHHHH
Confidence 9999875 222 235 8899999999998863 2 2233333467899999874 2456889
Q ss_pred HHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 001059 1081 RMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1155 (1170)
Q Consensus 1081 a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l 1155 (1170)
|.++++.||+.|++|++++. +.++++++++|++.|+|++|+||++|+++|+|+||++++++|..|+++++++.|
T Consensus 384 a~~l~~~Lr~~Gi~v~~D~~-~~~~g~k~~~ad~~g~p~~iivG~~e~~~g~v~vr~r~~~~~~~v~~~~l~~~l 457 (458)
T 2i4l_A 384 CDQLYRELSAKGVDVLYDDT-DQRAGAKFATADLIGIPWQIHVGPRGLAEGKVELKRRSDGARENLALADVVARL 457 (458)
T ss_dssp HHHHHHHHHHTTCCEEEECS-SCCHHHHHHHHHHHTCSEEEEECHHHHTTTEEEEEETTTCCEEEEETTTTTCC-
T ss_pred HHHHHHHHhhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECCchhhCCEEEEEECCCCcEEEEeHHHHHHhh
Confidence 99999999999999998876 679999999999999999999999999999999999999999999999987654
|
| >2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=367.30 Aligned_cols=258 Identities=24% Similarity=0.362 Sum_probs=208.3
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCC-cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCC------ceeEEEE
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDG-RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH------VVRYYQA 422 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg-~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hpn------IV~l~~~ 422 (1170)
...+.++|++.+.||+|+||+||+|.+..++ +.||||+++. .......+.+|+.+++.++|++ ++.++++
T Consensus 14 g~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~---~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~ 90 (355)
T 2eu9_A 14 GDWLQERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRN---VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDW 90 (355)
T ss_dssp TCEETTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEE
T ss_pred CceecccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcc---cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeee
Confidence 3445689999999999999999999998777 6899999863 2344567889999999998776 7888777
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC--CCCHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD--HFDKELAWHLFR 500 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~--~l~e~~~~~i~~ 500 (1170)
+.. ...+|+|||||+++|.+.+.... .+++..++.++.
T Consensus 91 ~~~----------------------------------------~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~i~~ 130 (355)
T 2eu9_A 91 FNF----------------------------------------HGHMCIAFELLGKNTFEFLKENNFQPYPLPHVRHMAY 130 (355)
T ss_dssp EEE----------------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCCHHHHHHHHH
T ss_pred eee----------------------------------------CCeEEEEEeccCCChHHHHHhccCCCCCHHHHHHHHH
Confidence 632 35789999999999888887654 699999999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceee-------------------cCCCCEEEeecCcchhccccccccCCCCCCCCCCc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFF-------------------DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGV 561 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi-------------------~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~ 561 (1170)
||+.||+|||++||+||||||+|||+ +.++.+||+|||+++....
T Consensus 131 qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~kl~Dfg~~~~~~~---------------- 194 (355)
T 2eu9_A 131 QLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHE---------------- 194 (355)
T ss_dssp HHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCEEECCCTTCEETTS----------------
T ss_pred HHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcEEEeecCccccccc----------------
Confidence 99999999999999999999999999 5678999999999975321
Q ss_pred cccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc---------
Q 001059 562 SVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW--------- 629 (1170)
Q Consensus 562 ~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~--------- 629 (1170)
.....+||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.........+..|..+
T Consensus 195 --~~~~~~gt~~y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 271 (355)
T 2eu9_A 195 --HHTTIVATRHYRPPEVILE-LGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKY 271 (355)
T ss_dssp --CCCSSCSCGGGCCHHHHTT-CCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGG
T ss_pred --cccCCcCCCcccCCeeeec-CCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhh
Confidence 1234579999999999987 568999999999999999997 8876555444333322223322211
Q ss_pred --------------------------------ccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHH
Q 001059 630 --------------------------------VAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 630 --------------------------------~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
...++++.+||++||+.||.+|||+.++|+||||.+...+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~ 343 (355)
T 2eu9_A 272 FYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPE 343 (355)
T ss_dssp EETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTSGGGGGCCHH
T ss_pred hcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHHhcChhhcCCChh
Confidence 0112478899999999999999999999999999987654
|
| >3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=365.56 Aligned_cols=253 Identities=20% Similarity=0.306 Sum_probs=204.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
...++|++.+.||+|+||+||+|+++.+|+ .||||+++.. ........+.+|+.+|+.++||||++++++|.+
T Consensus 46 ~~~~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 121 (325)
T 3kul_A 46 IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAG-YTERQRRDFLSEASIMGQFDHPNIIRLEGVVTR--- 121 (325)
T ss_dssp CCGGGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECG---
T ss_pred cChhHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEe---
Confidence 345789999999999999999999986555 5999999743 344456789999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||
T Consensus 122 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L 164 (325)
T 3kul_A 122 -------------------------------------GRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGM 164 (325)
T ss_dssp -------------------------------------GGCCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCccEEEeeCCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 345799999996 5999999754 5799999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..+
T Consensus 165 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~t~~y~aPE~~~~-~~~ 231 (325)
T 3kul_A 165 RYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPD------------AAYTTTGGKIPIRWTAPEAIAF-RTF 231 (325)
T ss_dssp HHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----------------CCEECC---CCGGGSCHHHHHH-CEE
T ss_pred HHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCcc------------ceeeccCCCCcccccCHhHhcC-CCC
Confidence 999999999999999999999999999999999986532210 0112234467889999999987 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+....... ...++.....++++.+||.+||+.||.+|||+.++++.
T Consensus 232 ~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~ 307 (325)
T 3kul_A 232 SSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEE--GYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSV 307 (325)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHc--CCCCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999999986 7766555554443332 23333445677899999999999999999999999864
|
| >3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=358.12 Aligned_cols=253 Identities=28% Similarity=0.446 Sum_probs=210.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..+.|++++.||+|+||.||+|++..+|+.||||++...... ...+.+.+|+.+++.++||||++++++|.+
T Consensus 20 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------- 91 (303)
T 3a7i_A 20 PEELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAE-DEIEDIQQEITVLSQCDSPYVTKYYGSYLK------- 91 (303)
T ss_dssp GGGTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCS-TTHHHHHHHHHHHHHCCCTTBCCEEEEEEE-------
T ss_pred hHHHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccH-HHHHHHHHHHHHHHhCCCCCEeEEEEEEec-------
Confidence 346799999999999999999999999999999999765432 345789999999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+||||+++ +|.+++.. ..+++..++.++.||+.||.|||+
T Consensus 92 ---------------------------------~~~~~lv~e~~~~~~L~~~~~~-~~~~~~~~~~~~~qi~~~l~~lH~ 137 (303)
T 3a7i_A 92 ---------------------------------DTKLWIIMEYLGGGSALDLLEP-GPLDETQIATILREILKGLDYLHS 137 (303)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEHHHHHTT-SCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCeEEEEEEeCCCCcHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999975 88888764 579999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..++.++|
T Consensus 138 ~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 201 (303)
T 3a7i_A 138 EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ---------------IKRNTFVGTPFWMAPEVIKQ-SAYDSKAD 201 (303)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTB---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHHH
T ss_pred CCCccCCCChheEEECCCCCEEEeecccceecCccc---------------cccCccCCCcCccCHHHHhc-CCCCchhh
Confidence 999999999999999999999999999998653221 11234579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
||||||++|+|++ ||.............. ...+......++.+.+||.+||+.||.+|||+.++++|+|+..
T Consensus 202 i~slG~il~~l~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~ 276 (303)
T 3a7i_A 202 IWSLGITAIELARGEPPHSELHPMKVLFLIPK--NNPPTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILR 276 (303)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH--SCCCCCCSSCCHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHH
T ss_pred hHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc--CCCCCCccccCHHHHHHHHHHcCCChhhCcCHHHHhhChhhhc
Confidence 9999999999997 7765554444333222 2233334456789999999999999999999999999998743
|
| >3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-39 Score=366.84 Aligned_cols=257 Identities=25% Similarity=0.360 Sum_probs=198.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+..+|+.||+|++.. ......+.+.+|+.+++.++||||+++++++.+
T Consensus 9 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 78 (310)
T 3s95_A 9 PSDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIR--FDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYK-------- 78 (310)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESC--CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred hhHeeccceecCCCCEEEEEEEECCCCcEEEEEEecc--CCHHHHHHHHHHHHHHHhCCCcCcccEEEEEec--------
Confidence 4789999999999999999999999999999998853 344566789999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++.. ...+++.+++.++.||+.||+|||+
T Consensus 79 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~ 126 (310)
T 3s95_A 79 --------------------------------DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHS 126 (310)
T ss_dssp --------------------------------TTEEEEEEECCTTCBHHHHHHHCCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeeEEEEEecCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 356899999996 599999987 5679999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++............. .............+||+.|+|||++.+ ..++.++|
T Consensus 127 ~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~D 204 (310)
T 3s95_A 127 MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLR-SLKKPDRKKRYTVVGNPYWMAPEMING-RSYDEKVD 204 (310)
T ss_dssp TTEECSCCSTTSEEECTTSCEEECCCTTCEECC---------------------CCCCSCGGGCCHHHHTT-CCCCTHHH
T ss_pred CCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccc-cccccccccccccCCCcceeCHHHhcC-CCCCcHHH
Confidence 9999999999999999999999999999987643321110000 000000111235689999999999988 67899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHH-----HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQ-----IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~-----~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||++|||++ ||....... ....... ...+ ..+++++.++|.+||+.||.+|||+.++++
T Consensus 205 i~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~---~~~~~~l~~li~~~l~~dP~~Rps~~~l~~ 275 (310)
T 3s95_A 205 VFSFGIVLCEIIGRVNADPDYLPRTMDFGLNVRGFLD--RYCP---PNCPPSFFPITVRCCDLDPEKRPSFVKLEH 275 (310)
T ss_dssp HHHHHHHHHHHHHTCCSSTTTSCBCTTSSBCHHHHHH--HTCC---TTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcchhhhHHHHhhhhhcccc--ccCC---CCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 9999999999996 443221100 0000000 1112 234568899999999999999999999986
|
| >3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-39 Score=371.36 Aligned_cols=252 Identities=23% Similarity=0.341 Sum_probs=203.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~-----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||.||+|++ ..+++.||||+++.. ........+.+|+.+|+++ +||||++++++|.+.
T Consensus 21 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~- 98 (359)
T 3vhe_A 21 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 98 (359)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST-
T ss_pred ccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCc-CCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecC-
Confidence 47899999999999999999994 456789999999743 3344556799999999999 899999999988432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC-----------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH----------------- 489 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~----------------- 489 (1170)
...+|+|||||++ +|.+++.....
T Consensus 99 --------------------------------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (359)
T 3vhe_A 99 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKD 140 (359)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHTTTTSBCSCC-----------
T ss_pred --------------------------------------CCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccc
Confidence 2346899999974 99999876533
Q ss_pred -------------------------------------------------CCHHHHHHHHHHHHHHHHHHHhCCccccCCC
Q 001059 490 -------------------------------------------------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520 (1170)
Q Consensus 490 -------------------------------------------------l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLK 520 (1170)
+++..++.++.||+.||+|||++||+|||||
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dik 220 (359)
T 3vhe_A 141 YVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLA 220 (359)
T ss_dssp -------------------------------------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCS
T ss_pred cccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCC
Confidence 8999999999999999999999999999999
Q ss_pred CCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHH
Q 001059 521 PNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFF 600 (1170)
Q Consensus 521 p~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ 600 (1170)
|+|||++.++.+||+|||+++...... .........||+.|+|||++.+ ..++.++|||||||++|
T Consensus 221 p~NIll~~~~~~kl~Dfg~a~~~~~~~-------------~~~~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~ 286 (359)
T 3vhe_A 221 ARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARLPLKWMAPETIFD-RVYTIQSDVWSFGVLLW 286 (359)
T ss_dssp GGGEEECGGGCEEECCCGGGSCTTSCT-------------TCEEC--CEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHH
T ss_pred hhhEEEcCCCcEEEEeccceeeecccc-------------cchhccccCCCceeEChhhhcC-CCCCchhhhhhHHHHHH
Confidence 999999999999999999998643211 0112244578999999999987 56899999999999999
Q ss_pred Hhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 601 ELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 601 ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||++ ||............+.. ...+......++++.++|.+||+.||.+|||+.++++|
T Consensus 287 ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 349 (359)
T 3vhe_A 287 EIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349 (359)
T ss_dssp HHTTTSCCSSTTCCCSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhcCCCCCCccchhHHHHHHHHc-CCCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 9996 77654433333333332 22333334567899999999999999999999999987
|
| >2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-39 Score=362.98 Aligned_cols=261 Identities=23% Similarity=0.367 Sum_probs=209.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
..++|++.+.||+|+||.||+|.+..+|+.||+|+++.... .......+.+|+.+++.++||||+++++++...
T Consensus 3 l~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~---- 78 (305)
T 2wtk_C 3 LIGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNE---- 78 (305)
T ss_dssp --CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC----
T ss_pred cccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcC----
Confidence 46789999999999999999999999999999999975321 123456789999999999999999999987431
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||+++|.+++.. ...+++..++.++.||+.||+|
T Consensus 79 ----------------------------------~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~ 124 (305)
T 2wtk_C 79 ----------------------------------EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEY 124 (305)
T ss_dssp -------------------------------------CEEEEEECCSEEHHHHHHHSTTCSCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEehhccCCHHHHHHhCcccccCHHHHHHHHHHHHHHHHH
Confidence 2356899999999888888765 3569999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-CCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-KID 587 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-~~~ 587 (1170)
||++||+||||||+|||++.++.+||+|||++........ ........||+.|+|||++.+.. .++
T Consensus 125 LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~~~~~~~ 191 (305)
T 2wtk_C 125 LHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAA-------------DDTCRTSQGSPAFQPPEIANGLDTFSG 191 (305)
T ss_dssp HHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCS-------------SCEECCCCSCGGGCCHHHHTCCSCEES
T ss_pred HHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcccc-------------ccccccCCCCCCCcChhhccCcccCCc
Confidence 9999999999999999999999999999999986532110 01113457999999999988632 247
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
.++|||||||++|||++ ||......+............+ ...++.+.+||.+||+.||.+|||+.++++|+|+.
T Consensus 192 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~ 268 (305)
T 2wtk_C 192 FKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP---GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFR 268 (305)
T ss_dssp HHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC---SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHH
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC---CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccc
Confidence 89999999999999997 8876655444443333332333 34667999999999999999999999999999886
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
...
T Consensus 269 ~~~ 271 (305)
T 2wtk_C 269 KKH 271 (305)
T ss_dssp SCC
T ss_pred cCC
Confidence 543
|
| >3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-38 Score=358.63 Aligned_cols=255 Identities=27% Similarity=0.386 Sum_probs=200.2
Q ss_pred cccCCceEEeeeccCCcEEEEEEE----EccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~----~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
...++|++++.||+|+||+||+|+ +..+|+.||||++.. ......+.+.+|+.+|+.++||||++++++|...
T Consensus 7 ~~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~- 83 (295)
T 3ugc_A 7 FEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQH--STEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA- 83 (295)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESC--CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHH-
T ss_pred CCHHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEccc--CCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecC-
Confidence 345789999999999999999999 456899999999864 3344557899999999999999999999987432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~g 505 (1170)
....+|+|||||+ ++|.+++.... .+++..++.++.||+.|
T Consensus 84 -------------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~ 126 (295)
T 3ugc_A 84 -------------------------------------GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKG 126 (295)
T ss_dssp -------------------------------------HHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCCceEEEEEeCCCCCHHHHHHhcccccCHHHHHHHHHHHHHH
Confidence 1345799999996 59999997654 49999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+|||++||+||||||+|||++.++.+||+|||+++........ ........||+.|+|||++.+ ..
T Consensus 127 l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~ 193 (295)
T 3ugc_A 127 MEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEF------------FKVKEPGESPIFWYAPESLTE-SK 193 (295)
T ss_dssp HHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------------------CTTCGGGGCCHHHHHH-CC
T ss_pred HHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcce------------eeeccCCCCccceeCcHHhcC-CC
Confidence 99999999999999999999999999999999999875422100 011233468889999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHH---------------HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQ---------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~---------------~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
++.++|||||||++|||++ ||....... .....+. ....++....+++++.+||.+||+.|
T Consensus 194 ~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~d 272 (295)
T 3ugc_A 194 FSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNN 272 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHSCSS
T ss_pred CChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHHHHh-ccCcCCCCcCcCHHHHHHHHHHcCCC
Confidence 8999999999999999997 444322110 1112222 23333444567789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+|||+.++++.
T Consensus 273 p~~Rps~~el~~~ 285 (295)
T 3ugc_A 273 VNQRPSFRDLALR 285 (295)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCCCHHHHHHH
Confidence 9999999999864
|
| >2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=371.10 Aligned_cols=250 Identities=23% Similarity=0.354 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-------~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
.++|++.+.||+|+||+||+|++. .++..||||+++.. ........+.+|+.+|+.+ +||||++++++|.+
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 158 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 158 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTT-CBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCC-cCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEcc
Confidence 478999999999999999999985 34568999998743 3344567899999999999 89999999998732
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 488 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 488 (1170)
...+|+|||||+ |+|.+++....
T Consensus 159 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~ 198 (370)
T 2psq_A 159 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 198 (370)
T ss_dssp ----------------------------------------SSSCEEEEECCTTCBHHHHHHHTCCC-----------CCC
T ss_pred ----------------------------------------CCCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccc
Confidence 345799999997 59999997643
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 199 ~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~ 265 (370)
T 2psq_A 199 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-------------YKKTTNG 265 (370)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCT-------------TCTTTTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccc-------------eecccCC
Confidence 478999999999999999999999999999999999999999999999999986532210 0112345
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.... +. .+..+.....+++++.++|.+||
T Consensus 266 ~~t~~y~aPE~~~~-~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 342 (370)
T 2psq_A 266 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL-LK-EGHRMDKPANCTNELYMMMRDCW 342 (370)
T ss_dssp TSCGGGCCHHHHHT-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH-HH-TTCCCCCCTTSCHHHHHHHHHHT
T ss_pred CcccceECHhHhcC-CCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH-Hh-cCCCCCCCCCCCHHHHHHHHHHc
Confidence 68899999999987 569999999999999999986 6655443333322 22 23333444567789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.||.+|||+.+++++
T Consensus 343 ~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 343 HAVPSQRPTFKQLVED 358 (370)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999975
|
| >2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-39 Score=364.49 Aligned_cols=267 Identities=24% Similarity=0.373 Sum_probs=188.2
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
....++|++.+.||+|+||.||+|++..+|+.||||++..... ......+.+|+.+++.++||||+++++++..
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~----- 84 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKC-QTSMDELLKEIQAMSQCHHPNIVSYYTSFVV----- 84 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC-----------------CCCCCCCTTBCCEEEEEES-----
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhc-chhHHHHHHHHHHHhhcCCCCEeeEEEEEee-----
Confidence 3446899999999999999999999998999999999865432 2334678899999999999999999998743
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--------cCCCCHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--------YDHFDKELAWHLFRQ 501 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--------~~~l~e~~~~~i~~q 501 (1170)
...+|+||||++ ++|.+++.. ...+++..++.++.|
T Consensus 85 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~q 129 (303)
T 2vwi_A 85 -----------------------------------KDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILRE 129 (303)
T ss_dssp -----------------------------------SSCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHH
T ss_pred -----------------------------------cCCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHH
Confidence 345799999996 599998863 345999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
|+.||+|||++||+||||||+|||++.++.+||+|||++.......... .........||+.|+|||++.
T Consensus 130 i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~----------~~~~~~~~~~~~~y~aPE~~~ 199 (303)
T 2vwi_A 130 VLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT----------RNKVRKTFVGTPCWMAPEVME 199 (303)
T ss_dssp HHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC-------------------------CCCTTCCHHHHH
T ss_pred HHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCcc----------chhhhcccCCCccccCHHHhc
Confidence 9999999999999999999999999999999999999998754221000 001123457999999999987
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC-------CCccccCCHHHHHHHHHccCCCCCCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL-------PPSWVAKFSEQESLLRRLMSPSPSDR 651 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~-------p~~~~~~~~e~~~LI~~~L~~dP~~R 651 (1170)
+...++.++|||||||++|+|++ ||................... +......++++.+||.+||+.||.+|
T Consensus 200 ~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R 279 (303)
T 2vwi_A 200 QVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKR 279 (303)
T ss_dssp HHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGS
T ss_pred cccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhC
Confidence 53458999999999999999997 776554443333332221111 11234566789999999999999999
Q ss_pred CCHHHHHhccCCCCchH
Q 001059 652 PSATELLQDALPPQMEY 668 (1170)
Q Consensus 652 Pta~eiL~~~~~~~~~~ 668 (1170)
||+.++++|+||.+...
T Consensus 280 ps~~~ll~h~~~~~~~~ 296 (303)
T 2vwi_A 280 PTAAELLRHKFFQKAKN 296 (303)
T ss_dssp CCHHHHHTSTTC-----
T ss_pred cCHHHHhhChhhhcCCC
Confidence 99999999999987653
|
| >2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-38 Score=360.63 Aligned_cols=263 Identities=21% Similarity=0.382 Sum_probs=206.8
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||.||+|++..+|+.||||++..... ....+.+|+.+++++ +||||++++++|.....
T Consensus 22 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~--- 95 (326)
T 2x7f_A 22 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD---EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP--- 95 (326)
T ss_dssp CTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS---TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC----
T ss_pred CCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc---cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC---
Confidence 35789999999999999999999999999999999975433 346788999999999 89999999999854310
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+|+|||||++ +|.+++... ..+++..++.++.||+.||+|
T Consensus 96 -------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~ 144 (326)
T 2x7f_A 96 -------------------------------PGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSH 144 (326)
T ss_dssp --------------------------------CCCCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------ccccceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 0124578999999975 999998764 569999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WP 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~ 584 (1170)
||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..
T Consensus 145 lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 209 (326)
T 2x7f_A 145 LHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTV---------------GRRNTFIGTPYWMAPEVIACDENPDA 209 (326)
T ss_dssp HHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC----------------------------CCGGGCCHHHHC-------
T ss_pred HHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCc---------------cccccccCCccccChhhhccccccCc
Confidence 999999999999999999999999999999998653211 01234579999999999863 24
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
.++.++|||||||++|+|++ ||.............. ...........++.+.+||.+||+.||.+|||+.++++||
T Consensus 210 ~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp 288 (326)
T 2x7f_A 210 TYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIPR-NPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHP 288 (326)
T ss_dssp -CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH-SCCCCCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSH
T ss_pred CCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc-CccccCCccccCHHHHHHHHHHhccChhhCCCHHHHhhCh
Confidence 58899999999999999997 7766555444333322 2222222345678999999999999999999999999999
Q ss_pred CCCCchH
Q 001059 662 LPPQMEY 668 (1170)
Q Consensus 662 ~~~~~~~ 668 (1170)
|+.....
T Consensus 289 ~~~~~~~ 295 (326)
T 2x7f_A 289 FIRDQPN 295 (326)
T ss_dssp HHHCCTT
T ss_pred HHhhCcc
Confidence 9877643
|
| >2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.2e-39 Score=370.81 Aligned_cols=265 Identities=22% Similarity=0.411 Sum_probs=214.6
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh---------------hHHHHHHHHHHHHhccCCC
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP---------------VNDRILREVATLSRLQHQH 415 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~---------------~~~~~~~Ev~iL~~l~Hpn 415 (1170)
..+.++|++.+.||+|+||.||+|.+ +|+.||||++........ ....+.+|+.+++.++|||
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 104 (348)
T 2pml_X 27 DKYINDYRIIRTLNQGKFNKIILCEK--DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEY 104 (348)
T ss_dssp CEEETTEEEEEEEECCSSCCEEEEEE--TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTT
T ss_pred ccccCceEEEEEEcCCCCeEEEEEEc--CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCC
Confidence 45578999999999999999999999 899999999975322111 1178999999999999999
Q ss_pred ceeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHH------HHh--
Q 001059 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQV------FES-- 486 (1170)
Q Consensus 416 IV~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~------l~~-- 486 (1170)
|+++++++.+ ...+|+|||||++ +|.++ +..
T Consensus 105 i~~~~~~~~~----------------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~ 144 (348)
T 2pml_X 105 CLTCEGIITN----------------------------------------YDEVYIIYEYMENDSILKFDEYFFVLDKNY 144 (348)
T ss_dssp BCCCSEEEES----------------------------------------SSEEEEEEECCTTCBSSEESSSEESSCSSS
T ss_pred cceEEEEEee----------------------------------------CCeEEEEEeccCCCcHHHHHHHhhhhhhcc
Confidence 9999998732 3578999999975 99888 655
Q ss_pred cCCCCHHHHHHHHHHHHHHHHHHHh-CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccC
Q 001059 487 YDHFDKELAWHLFRQIVEGLAHIHG-QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565 (1170)
Q Consensus 487 ~~~l~e~~~~~i~~qI~~gL~yLHs-~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~ 565 (1170)
...+++..++.++.||+.||+|||+ +||+||||||+|||++.++.+||+|||++...... ..
T Consensus 145 ~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~-----------------~~ 207 (348)
T 2pml_X 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDK-----------------KI 207 (348)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTT-----------------EE
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccc-----------------cc
Confidence 5679999999999999999999999 99999999999999999999999999999864321 11
Q ss_pred cccccCccCCCcccccCCCCCCc-cchhHHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCCCc------------
Q 001059 566 TGQVGTYFYTAPEIEQGWPKIDE-KADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPPS------------ 628 (1170)
Q Consensus 566 ~~~~GT~~Y~APE~l~~~~~~~~-ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p~~------------ 628 (1170)
....||+.|+|||++.+...++. ++|||||||++|||++ ||..... .+............|..
T Consensus 208 ~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 287 (348)
T 2pml_X 208 KGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKK 287 (348)
T ss_dssp CSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCCCCSSSSSTTTTCC--
T ss_pred cCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCCccchhhhhccccccc
Confidence 34579999999999988535666 9999999999999997 7776554 33333333322233311
Q ss_pred ----cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchHHHHHHH
Q 001059 629 ----WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNI 674 (1170)
Q Consensus 629 ----~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~~~~~~~ 674 (1170)
....++++.+||.+||+.||.+|||+.++++||||.......+...
T Consensus 288 ~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~~~~~~~~~ 337 (348)
T 2pml_X 288 STCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREF 337 (348)
T ss_dssp ------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTCCHHHHHHH
T ss_pred cccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCCCHHHHHHH
Confidence 1456789999999999999999999999999999999876655444
|
| >3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-38 Score=371.80 Aligned_cols=251 Identities=21% Similarity=0.285 Sum_probs=202.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~-----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++++.||+|+||+||+|++ ..+++.||||+++. .........+.+|+.+++.++||||+++++++..
T Consensus 70 ~~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~--- 145 (367)
T 3l9p_A 70 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE-VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ--- 145 (367)
T ss_dssp GGGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCS-SCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HhHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEeccc-ccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEec---
Confidence 47899999999999999999994 45678999999863 3344455678999999999999999999998733
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------CCCHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLFR 500 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~~ 500 (1170)
....|+|||||+ ++|.+++.... .+++..++.++.
T Consensus 146 -------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~ 188 (367)
T 3l9p_A 146 -------------------------------------SLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVAR 188 (367)
T ss_dssp -------------------------------------SSSCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHH
T ss_pred -------------------------------------CCCCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHH
Confidence 234589999996 59999997643 489999999999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCC---CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARN---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~---~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
||+.||+|||++||+||||||+|||++.++ .+||+|||+|+........ .......||+.|+||
T Consensus 189 qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~~~~~~-------------~~~~~~~~t~~y~aP 255 (367)
T 3l9p_A 189 DIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYY-------------RKGGCAMLPVKWMPP 255 (367)
T ss_dssp HHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHHHSSC-------------TTCCGGGSCGGGCCH
T ss_pred HHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccccccccc-------------ccCCCcCCcccEECH
Confidence 999999999999999999999999999555 5999999999866432211 112345789999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|++.+ ..++.++|||||||++|||++ ||......+....... +..+......++.+.+||.+||+.||.+|||
T Consensus 256 E~~~~-~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps 332 (367)
T 3l9p_A 256 EAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTS--GGRMDPPKNCPGPVYRIMTQCWQHQPEDRPN 332 (367)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred HHhcC-CCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCccCCHHHHHHHHHHcCCCHhHCcC
Confidence 99987 569999999999999999996 7766555544433332 2223333456789999999999999999999
Q ss_pred HHHHHhcc
Q 001059 654 ATELLQDA 661 (1170)
Q Consensus 654 a~eiL~~~ 661 (1170)
+.+++++.
T Consensus 333 ~~eil~~l 340 (367)
T 3l9p_A 333 FAIILERI 340 (367)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999875
|
| >3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-38 Score=360.51 Aligned_cols=259 Identities=25% Similarity=0.373 Sum_probs=204.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc--CCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~--HpnIV~l~~~~~e~~~~~~ 431 (1170)
.++|++++.||+|+||.||+|.+. +|+.||||++............+.+|+.++++++ ||||+++++++..
T Consensus 27 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~------ 99 (313)
T 3cek_A 27 GRIYSILKQIGSGGSSKVFQVLNE-KKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT------ 99 (313)
T ss_dssp TEEEEEEEEEECCSSEEEEEEECT-TCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEEC------
T ss_pred cceEEEEEEecCCCCEEEEEEEcC-CCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeec------
Confidence 357999999999999999999986 6899999999876666666778999999999997 5999999988733
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++||+++++|.+++.....+++..++.++.||+.||+|||+
T Consensus 100 ----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~ 145 (313)
T 3cek_A 100 ----------------------------------DQYIYMVMECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145 (313)
T ss_dssp ----------------------------------SSEEEEEECCCSEEHHHHHHHCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3568999998788999999988899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--------
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-------- 583 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-------- 583 (1170)
+||+||||||+|||++ ++.+||+|||+++....... ........||+.|+|||++.+.
T Consensus 146 ~~ivH~dlkp~NIl~~-~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~ 211 (313)
T 3cek_A 146 HGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTT-------------SVVKDSQVGTVNYMPPEAIKDMSSSRENGK 211 (313)
T ss_dssp TTCCCCCCCGGGEEEE-TTEEEECCCSSSCC---------------------------CCGGGCCHHHHTTCC-------
T ss_pred CCceecCCCcccEEEE-CCeEEEeeccccccccCccc-------------cccccCCCCCCCcCCHHHHhhccccccccc
Confidence 9999999999999996 48999999999986532210 0112345799999999998752
Q ss_pred --CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 584 --PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 584 --~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
..++.++|||||||++|+|++ ||..........................++++.+||.+||+.||.+|||+.+++
T Consensus 212 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 291 (313)
T 3cek_A 212 SKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291 (313)
T ss_dssp ---CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHCTTSCCCCCCCSCHHHHHHHHHHTCSSTTTSCCHHHHH
T ss_pred ccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHhcccccCCcccchHHHHHHHHHHccCCcccCcCHHHHh
Confidence 357889999999999999996 776543322222222222222222233467899999999999999999999999
Q ss_pred hccCCCCch
Q 001059 659 QDALPPQME 667 (1170)
Q Consensus 659 ~~~~~~~~~ 667 (1170)
+|+|+....
T Consensus 292 ~h~~~~~~~ 300 (313)
T 3cek_A 292 AHPYVQIQT 300 (313)
T ss_dssp TSHHHHCC-
T ss_pred cCccccCCC
Confidence 999987654
|
| >2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-38 Score=359.38 Aligned_cols=257 Identities=24% Similarity=0.395 Sum_probs=192.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||.||+|+++.+|+.||||++............+.++..+++.++||||+++++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~-------- 95 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFIT-------- 95 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC--------
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEec--------
Confidence 578999999999999999999999999999999998654433333444555567888899999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+||||+++.+..+... ...+++..++.++.||+.||.|||++
T Consensus 96 --------------------------------~~~~~lv~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~ 143 (318)
T 2dyl_A 96 --------------------------------NTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEK 143 (318)
T ss_dssp --------------------------------SSEEEEEECCCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEeccCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 356899999997666666543 46799999999999999999999995
Q ss_pred -CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCC
Q 001059 513 -GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKID 587 (1170)
Q Consensus 513 -gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~ 587 (1170)
||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.+ ...++
T Consensus 144 ~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~ 207 (318)
T 2dyl_A 144 HGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDK----------------AKDRSAGCAAYMAPERIDPPDPTKPDYD 207 (318)
T ss_dssp HCCCCCCCCGGGEEECTTSCEEECCCTTC------------------------------CCTTCCHHHHC--------CC
T ss_pred CCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCc----------------cccccCCCccccChhhcccccccccCCc
Confidence 99999999999999999999999999997653211 1123479999999999852 24588
Q ss_pred ccchhHHHHHHHHHhhc---CCCchh-HHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAM-ERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
.++|||||||++|+|++ ||.... ..+.............+.....++++.+||.+||+.||.+|||+.++++|+|+
T Consensus 208 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~ 287 (318)
T 2dyl_A 208 IRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFI 287 (318)
T ss_dssp THHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHH
T ss_pred cccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHH
Confidence 99999999999999997 776532 33333333333333333344577899999999999999999999999999988
Q ss_pred CCc
Q 001059 664 PQM 666 (1170)
Q Consensus 664 ~~~ 666 (1170)
.+.
T Consensus 288 ~~~ 290 (318)
T 2dyl_A 288 KRY 290 (318)
T ss_dssp HHH
T ss_pred Hhc
Confidence 654
|
| >4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-38 Score=349.95 Aligned_cols=246 Identities=22% Similarity=0.375 Sum_probs=203.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++. +++.||+|++...... .+.+.+|+.++++++||||+++++++.+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 76 (269)
T 4hcu_A 9 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE-------- 76 (269)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS--------
T ss_pred hhhceeeheecCCCccEEEEEEec-CCCeEEEEEecccccC---HHHHHHHHHHHHhCCCCCEeeEEEEEec--------
Confidence 368999999999999999999997 6788999999754333 4578999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 77 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 124 (269)
T 4hcu_A 77 --------------------------------QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 124 (269)
T ss_dssp --------------------------------SSSEEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeCCCCcHHHHHHhcCcccCHHHHHHHHHHHHHHHHHHHh
Confidence 345799999997 5899998654 459999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++........ ......||+.|+|||++.+ ..++.++|
T Consensus 125 ~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 189 (269)
T 4hcu_A 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT--------------SSTGTKFPVKWASPEVFSF-SRYSSKSD 189 (269)
T ss_dssp TTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH--------------STTSTTCCGGGCCHHHHHH-CCCCHHHH
T ss_pred CCeecCCcchheEEEcCCCCEEeccccccccccccccc--------------cccCcccccccCCHHHhcC-CCCCchhh
Confidence 99999999999999999999999999999865432211 1233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||+++|+|++ ||......+........ ..+......++++.++|.+||+.||.+|||+.+++++
T Consensus 190 i~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 260 (269)
T 4hcu_A 190 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTG--FRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 260 (269)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTT--CCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcC--ccCCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 9999999999986 77665555544443322 2222334457899999999999999999999999986
|
| >1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=369.60 Aligned_cols=256 Identities=23% Similarity=0.348 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-----------CCCceeEEEE
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----------HQHVVRYYQA 422 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-----------HpnIV~l~~~ 422 (1170)
.++|++.+.||+|+||+||+|++..+|+.||||++.. .......+.+|+.+++.++ ||||++++++
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~---~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~ 94 (373)
T 1q8y_A 18 DARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRG---DKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDH 94 (373)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECS---CHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEE
T ss_pred CCeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecC---CccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHH
Confidence 4789999999999999999999999999999999863 3334567889999999886 8999999998
Q ss_pred EeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHH
Q 001059 423 WFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFR 500 (1170)
Q Consensus 423 ~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~ 500 (1170)
+...+ .....++++|||++++|.+++... ..+++..++.++.
T Consensus 95 ~~~~~------------------------------------~~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~~i~~ 138 (373)
T 1q8y_A 95 FNHKG------------------------------------PNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 138 (373)
T ss_dssp EEEEE------------------------------------TTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred hhccC------------------------------------CCCceEEEEEecCCCCHHHHHHHhhccCCcHHHHHHHHH
Confidence 85421 123578999999988999998763 4599999999999
Q ss_pred HHHHHHHHHHhC-CccccCCCCCceeec------CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 501 QIVEGLAHIHGQ-GIIHRDLTPNNIFFD------ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 501 qI~~gL~yLHs~-gIiHrDLKp~NILi~------~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
||+.||+|||++ ||+||||||+|||++ ..+.+||+|||+++..... .+...||+.
T Consensus 139 qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a~~~~~~------------------~~~~~~t~~ 200 (373)
T 1q8y_A 139 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEH------------------YTNSIQTRE 200 (373)
T ss_dssp HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTBC------------------CCSCCSCGG
T ss_pred HHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccccccCCC------------------CCCCCCCcc
Confidence 999999999998 999999999999994 3447999999999864311 134579999
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchh------HHHHHHHHhhhcCCCCCc----------------
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAM------ERQIVLSDLKQKGELPPS---------------- 628 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~------~~~~~~~~l~~~~~~p~~---------------- 628 (1170)
|+|||++.+ ..++.++|||||||++|||++ ||.... ............+..|..
T Consensus 201 y~aPE~~~~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 279 (373)
T 1q8y_A 201 YRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 279 (373)
T ss_dssp GCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--
T ss_pred ccCcHHHhC-CCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCCHHHHhccchhhhhcCCcc
Confidence 999999988 568999999999999999997 776432 112222222212222211
Q ss_pred -----------------------cccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 629 -----------------------WVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 629 -----------------------~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
....++++.+||.+||+.||.+|||+.++|+||||.+..
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~ 341 (373)
T 1q8y_A 280 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL 341 (373)
T ss_dssp CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred hhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence 112345788999999999999999999999999998753
|
| >2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-38 Score=363.16 Aligned_cols=254 Identities=20% Similarity=0.255 Sum_probs=202.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++..... ...+.+|+.+++.+ +||||+++++++..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~E~~~l~~l~~h~~i~~~~~~~~~------ 76 (330)
T 2izr_A 7 VGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR----APQLHLEYRFYKQLGSGDGIPQVYYFGPC------ 76 (330)
T ss_dssp ETTTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS----SCCHHHHHHHHHHHCSCTTSCCEEEEEEE------
T ss_pred EcCCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHhhCCCCCCEEEEEEec------
Confidence 34789999999999999999999999999999999975432 23578999999999 99999999988733
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....|+|||||+++|.+++... ..+++..++.++.||+.||+|||
T Consensus 77 ----------------------------------~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 122 (330)
T 2izr_A 77 ----------------------------------GKYNAMVLELLGPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVH 122 (330)
T ss_dssp ----------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCccEEEEEeCCCCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 3578999999988999999864 67999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCC-----EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 511 GQGIIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
++||+||||||+|||++.++. +||+|||+++.+......... ........+||+.|+|||++.+ ..
T Consensus 123 ~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~-~~ 193 (330)
T 2izr_A 123 SKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHI--------PYREHKSLTGTARYMSINTHLG-KE 193 (330)
T ss_dssp HTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBC--------CCCCCCCCCSCTTTCCHHHHTT-CC
T ss_pred hCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccc--------cccccCCcCCCccccChHHHcC-CC
Confidence 999999999999999998887 999999999875432211100 0112345689999999999998 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchh---HHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~---~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
++.++|||||||++|||++ ||.... ..+....+.......+. ......|++.++|.+||+.||.+||++.+|+
T Consensus 194 ~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~ 273 (330)
T 2izr_A 194 QSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLR 273 (330)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred CCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHH
Confidence 8999999999999999997 786532 22222222221222221 2223345899999999999999999999998
Q ss_pred h
Q 001059 659 Q 659 (1170)
Q Consensus 659 ~ 659 (1170)
+
T Consensus 274 ~ 274 (330)
T 2izr_A 274 K 274 (330)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-38 Score=349.17 Aligned_cols=246 Identities=25% Similarity=0.392 Sum_probs=202.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||.||+|.++ ++..||+|+++..... ...+.+|+.++++++||||++++++|..
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 74 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWK-GQYDVAVKMIKEGSMS---EDEFFQEAQTMMKLSHPKLVKFYGVCSK-------- 74 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECBTTBC---HHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhheeeeeeeccCCCceEEEEEec-CceeEEEEEeccCCCc---HHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 478999999999999999999887 6778999999754333 4568999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+|||+
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 122 (268)
T 3sxs_A 75 --------------------------------EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLES 122 (268)
T ss_dssp --------------------------------SSSEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 58999987654 59999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||++....... ........+|+.|+|||++.+ ..++.++|
T Consensus 123 ~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (268)
T 3sxs_A 123 HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQ--------------YVSSVGTKFPVKWSAPEVFHY-FKYSSKSD 187 (268)
T ss_dssp TTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTC--------------EEECCSCCCCGGGCCHHHHHH-SEEETTHH
T ss_pred CCeecCCcCcceEEECCCCCEEEccCccceecchhh--------------hhcccCCCcCcccCCHHHHhc-cCCchhhh
Confidence 999999999999999999999999999998653221 111234467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||+++|+|++ ||................ .+......++++.++|.+||+.||.+|||+.+++++
T Consensus 188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (268)
T 3sxs_A 188 VWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGH--RLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSS 258 (268)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTC--CCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCC--CCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999996 777665555544443322 222223456789999999999999999999999986
|
| >1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=4.3e-38 Score=362.15 Aligned_cols=250 Identities=20% Similarity=0.310 Sum_probs=205.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|++. .+++.||||+++.. ........+.+|+.+++.++||||++++++|.+
T Consensus 46 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 121 (343)
T 1luf_A 46 RNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAV--- 121 (343)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS---
T ss_pred HHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc---
Confidence 478999999999999999999997 35589999998743 344456789999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 487 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 487 (1170)
...+|+|||||+ ++|.+++...
T Consensus 122 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 164 (343)
T 1luf_A 122 -------------------------------------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVS 164 (343)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHTCC------------------
T ss_pred -------------------------------------CCceEEEEecCCCCcHHHHHHHhCccccccccccccccccccc
Confidence 345699999997 4999998763
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccc
Q 001059 488 ----DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 563 (1170)
Q Consensus 488 ----~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 563 (1170)
..+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .
T Consensus 165 ~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-------------~ 231 (343)
T 1luf_A 165 SPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------K 231 (343)
T ss_dssp ----CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-------------C
T ss_pred ccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCCCeEEEeecCCCcccccCccc-------------c
Confidence 56999999999999999999999999999999999999999999999999999876432211 1
Q ss_pred cCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 001059 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639 (1170)
Q Consensus 564 ~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~L 639 (1170)
......||+.|+|||++.+ ..++.++|||||||++|||++ ||......+...... .+..+......++++.+|
T Consensus 232 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~l 308 (343)
T 1luf_A 232 ADGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR--DGNILACPENCPLELYNL 308 (343)
T ss_dssp ----CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHH
T ss_pred ccCCCcccceecChhhhcc-CCcCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHHHHh--CCCcCCCCCCCCHHHHHH
Confidence 1233568999999999987 568999999999999999996 776655554443333 233333344667899999
Q ss_pred HHHccCCCCCCCCCHHHHHhc
Q 001059 640 LRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~ 660 (1170)
|++||+.||.+|||+.+++++
T Consensus 309 i~~~l~~~p~~Rps~~~~~~~ 329 (343)
T 1luf_A 309 MRLCWSKLPADRPSFCSIHRI 329 (343)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcccCcccCCCHHHHHHH
Confidence 999999999999999999875
|
| >3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-38 Score=348.66 Aligned_cols=248 Identities=19% Similarity=0.244 Sum_probs=207.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|++. |+.||||+++....+....+.+.+|+.++++++||||++++++|.+.
T Consensus 7 i~~~~y~~~~~lg~G~~g~V~~~~~~--~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 79 (271)
T 3kmu_A 7 IDFKQLNFLTKLNENHSGELWKGRWQ--GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSP----- 79 (271)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEET--TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTT-----
T ss_pred CCHHHhHHHHHhcCCCcceEEEEEEC--CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccC-----
Confidence 34578999999999999999999985 89999999987766666677899999999999999999999987432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|++||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 80 ---------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~ 126 (271)
T 3kmu_A 80 ---------------------------------PAPHPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAF 126 (271)
T ss_dssp ---------------------------------TSSSCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCCeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHH
Confidence 1246799999997 59999998765 48999999999999999999
Q ss_pred HHhCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--
Q 001059 509 IHGQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-- 584 (1170)
Q Consensus 509 LHs~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~-- 584 (1170)
||++| |+||||||+|||++.++.++|+|||++.... .....||+.|+|||++.+..
T Consensus 127 lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~--------------------~~~~~~t~~y~aPE~~~~~~~~ 186 (271)
T 3kmu_A 127 LHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQ--------------------SPGRMYAPAWVAPEALQKKPED 186 (271)
T ss_dssp HTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTS--------------------CTTCBSCGGGSCHHHHHSCGGG
T ss_pred HhcCCCceecCCCccceEEEcCCcceeEEeccceeeec--------------------ccCccCCccccChhhhccCCCC
Confidence 99999 9999999999999999999999999876421 13357899999999998732
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++.++|||||||++|||++ ||.............. ....+......++++.++|.+||+.||.+|||+.++++.
T Consensus 187 ~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 264 (271)
T 3kmu_A 187 TNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL-EGLRPTIPPGISPHVSKLMKICMNEDPAKRPKFDMIVPI 264 (271)
T ss_dssp SCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh-cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 23348999999999999997 8876665555444443 333444445677899999999999999999999999864
|
| >2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-38 Score=353.40 Aligned_cols=257 Identities=26% Similarity=0.364 Sum_probs=202.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|.....||+|+||.||+|.+..+++.||||+++... ....+.+.+|+.+++.++||||++++++|.+
T Consensus 21 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 90 (295)
T 2clq_A 21 YDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD--SRYSQPLHEEIALHKHLKHKNIVQYLGSFSE-------- 90 (295)
T ss_dssp BCTTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC--C---HHHHHHHHHHHTCCCTTBCCEEEEEEE--------
T ss_pred ccCCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc--hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEe--------
Confidence 345566678999999999999999999999999997543 2345678999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||+||
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~l 138 (295)
T 2clq_A 91 --------------------------------NGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYL 138 (295)
T ss_dssp --------------------------------TTEEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHH
Confidence 356899999996 59999887642 467899999999999999999
Q ss_pred HhCCccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKID 587 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~ 587 (1170)
|++||+||||||+|||++. ++.+||+|||+++...... .......||+.|+|||++.+. ..++
T Consensus 139 H~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~~~~~~~ 203 (295)
T 2clq_A 139 HDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGIN---------------PCTETFTGTLQYMAPEIIDKGPRGYG 203 (295)
T ss_dssp HHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC--------------------CCCCCCGGGCCHHHHHHGGGGCS
T ss_pred HhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCC---------------CcccccCCCccccChhhhcCCCCCCC
Confidence 9999999999999999987 8999999999998643211 012345799999999998753 2378
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
.++|||||||++|+|++ ||...................+......++++.+||.+||+.||.+|||+.++++|+|+.
T Consensus 204 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~ 283 (295)
T 2clq_A 204 KAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFKVHPEIPESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283 (295)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHCCCCCCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGC
T ss_pred cHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhccccccccccccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhh
Confidence 99999999999999997 776543322222221112223333445678999999999999999999999999999998
Q ss_pred Cch
Q 001059 665 QME 667 (1170)
Q Consensus 665 ~~~ 667 (1170)
...
T Consensus 284 ~~~ 286 (295)
T 2clq_A 284 VSS 286 (295)
T ss_dssp C--
T ss_pred hcc
Confidence 654
|
| >3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-38 Score=362.12 Aligned_cols=264 Identities=19% Similarity=0.250 Sum_probs=187.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||+||+|++..++. .||||+++.........+.+.+|+.+++.++||||+++++++.....
T Consensus 22 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~-- 99 (323)
T 3qup_A 22 EQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA-- 99 (323)
T ss_dssp ---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC----
T ss_pred hhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc--
Confidence 3689999999999999999999987765 89999997655455567789999999999999999999998854310
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC------CCCHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD------HFDKELAWHLFRQIV 503 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~------~l~e~~~~~i~~qI~ 503 (1170)
.......|++||||++ +|.+++.... .+++..++.++.||+
T Consensus 100 --------------------------------~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~ 147 (323)
T 3qup_A 100 --------------------------------KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIA 147 (323)
T ss_dssp -------------------------------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHH
T ss_pred --------------------------------ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHH
Confidence 0112345899999974 9999886433 599999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||+|||++||+||||||+|||++.++.+||+|||+++....... ........+|+.|+|||++.+
T Consensus 148 ~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~- 213 (323)
T 3qup_A 148 CGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY-------------YRQGCASKLPVKWLALESLAD- 213 (323)
T ss_dssp HHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCGGGCCHHHHHH-
T ss_pred HHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccccccccc-------------ccccccccCcccccCchhhcC-
Confidence 999999999999999999999999999999999999986533221 111233467889999999987
Q ss_pred CCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC------
Q 001059 584 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS------ 653 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt------ 653 (1170)
..++.++|||||||++|||++ ||......+....... ...++.....++++.+||.+||+.||.+|||
T Consensus 214 ~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 291 (323)
T 3qup_A 214 NLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG--GNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRM 291 (323)
T ss_dssp CCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHT--TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCCCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhc--CCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence 568999999999999999986 6665544444333332 2233344566789999999999999999999
Q ss_pred -HHHHHhccCCCCch
Q 001059 654 -ATELLQDALPPQME 667 (1170)
Q Consensus 654 -a~eiL~~~~~~~~~ 667 (1170)
++++++|+|+....
T Consensus 292 ~l~~~l~~~~~~~~~ 306 (323)
T 3qup_A 292 ELENILGHLSVLSTS 306 (323)
T ss_dssp HHHHHHHC-------
T ss_pred HHHHHHHHhhhcCCC
Confidence 45556666666554
|
| >1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-37 Score=350.50 Aligned_cols=256 Identities=18% Similarity=0.201 Sum_probs=203.3
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++.+.||+|+||+||+|++..+|+.||||++..... ...+.+|+.+++.+ +||||+++++++.+
T Consensus 7 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~~~~e~~~~~~l~~~~~i~~~~~~~~~----- 77 (298)
T 1csn_A 7 VVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD----APQLRDEYRTYKLLAGCTGIPNVYYFGQE----- 77 (298)
T ss_dssp EETTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT----SCCHHHHHHHHHHTTTCTTCCCEEEEEEE-----
T ss_pred ccccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc----cHHHHHHHHHHHHHhcCCCCCeEEeecCC-----
Confidence 345789999999999999999999999999999999874432 23578899999999 89999999987632
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|+||||++++|.+++...+ .+++..++.++.||+.||+||
T Consensus 78 -----------------------------------~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~l 122 (298)
T 1csn_A 78 -----------------------------------GLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSI 122 (298)
T ss_dssp -----------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CceeEEEEEecCCCHHHHHHHhccCCCHHHHHHHHHHHHHHHHHH
Confidence 45789999999889999998654 599999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCC-----EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 510 HGQGIIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
|++||+||||||+|||++.++. +||+|||+++........... .........||+.|+|||++.+ .
T Consensus 123 H~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~-~ 193 (298)
T 1csn_A 123 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHI--------PYREKKNLSGTARYMSINTHLG-R 193 (298)
T ss_dssp HTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBC--------CCCCCCCCCSCTTTCCHHHHTT-C
T ss_pred HhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccc--------cccCccCCCCCcccCCchhhcC-C
Confidence 9999999999999999987776 999999999876432211100 0012345689999999999987 5
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchh---HHHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~---~~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
.++.++|||||||++|||++ ||.... ..+........ ....+......++++.+||.+||+.||.+|||+.+
T Consensus 194 ~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~ 273 (298)
T 1csn_A 194 EQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDY 273 (298)
T ss_dssp CCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHH
T ss_pred CCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHH
Confidence 68999999999999999997 776531 22222222111 11112223356789999999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
+++.
T Consensus 274 l~~~ 277 (298)
T 1csn_A 274 LQGL 277 (298)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9864
|
| >3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=349.42 Aligned_cols=246 Identities=20% Similarity=0.355 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|.+. ++..||||+++..... .+.+.+|+.+++.++||||++++++|.+
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 90 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTK-------- 90 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEET-TTEEEEEEEECTTSBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS--------
T ss_pred HHHHHhHhhcCCCCCceEEEEEEc-CCCeEEEEEecCCCCC---HHHHHHHHHHHhcCCCCCEeeEEEEEec--------
Confidence 478999999999999999999887 6788999999754333 4578999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 91 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 138 (283)
T 3gen_A 91 --------------------------------QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLES 138 (283)
T ss_dssp --------------------------------SSSEEEEECCCTTCBHHHHHHCGGGCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCeEEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345799999996 699999876 5679999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+ ..++.++|
T Consensus 139 ~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~D 203 (283)
T 3gen_A 139 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT--------------SSVGSKFPVRWSPPEVLMY-SKFSSKSD 203 (283)
T ss_dssp TTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHH--------------STTSTTSCGGGCCHHHHHH-CCCSHHHH
T ss_pred CCccCCCCccceEEEcCCCCEEEccccccccccccccc--------------cccCCccCcccCCHHHhcc-CCCCchhh
Confidence 99999999999999999999999999999865432211 1233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||+++|+|++ ||............... ..+......++.+.++|.+||+.||.+|||+.+++++
T Consensus 204 v~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 274 (283)
T 3gen_A 204 IWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQG--LRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 274 (283)
T ss_dssp HHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTT--CCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCccccChhHHHHHHhcc--cCCCCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence 9999999999986 77765555444443332 2222233456789999999999999999999999986
|
| >3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-38 Score=371.87 Aligned_cols=250 Identities=22% Similarity=0.325 Sum_probs=203.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|+++.+|+.||||+++.. ........+.+|+.+|+.++||||+++++++..
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 183 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRET-LPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQ-------- 183 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTT-SCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECS--------
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEcccc-CCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEec--------
Confidence 46899999999999999999999999999999998743 333445578899999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ ++|.+++...+ .+++..++.++.||+.||+|||+
T Consensus 184 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~ 231 (377)
T 3cbl_A 184 --------------------------------KQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLES 231 (377)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 345699999996 69999987654 59999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++........ .......+|+.|+|||++.+ ..++.++|
T Consensus 232 ~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~-------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 297 (377)
T 3cbl_A 232 KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYA-------------ASGGLRQVPVKWTAPEALNY-GRYSSESD 297 (377)
T ss_dssp TTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEE-------------CCSSCCEEEGGGSCHHHHHH-CEEEHHHH
T ss_pred CCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCcee-------------ecCCCCCCCcCcCCHhHhcc-CCCCchhh
Confidence 99999999999999999999999999999754221100 01122346788999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||++|||++ ||......+.... +. .+..++....+++++.+||.+||+.||.+|||+.++++.
T Consensus 298 vwslG~il~el~t~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~ 368 (377)
T 3cbl_A 298 VWSFGILLWETFSLGASPYPNLSNQQTREF-VE-KGGRLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQE 368 (377)
T ss_dssp HHHHHHHHHHHHTTSCCSSTTSCHHHHHHH-HH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence 9999999999996 7766554443322 22 233333344567899999999999999999999999864
|
| >3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-38 Score=362.32 Aligned_cols=256 Identities=26% Similarity=0.393 Sum_probs=185.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHH-HHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVA-TLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~-iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++.+.||+|+||.||+|.++.+|+.||||+++.... ......+.+|+. +++.++||||+++++++..
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~------- 92 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVD-EKEQKQLLMDLDVVMRSSDCPYIVQFYGALFR------- 92 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCC-HHHHHHHHHHHHHHHSSCCCTTBCCEEEEEEC-------
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccC-chHHHHHHHHHHHHHHcCCCCcEeeeeeEEEe-------
Confidence 4789999999999999999999999999999999975433 334455666666 6777899999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-----cCCCCHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-----YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-----~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||||+++|.+++.. ...+++..++.++.|++.||.
T Consensus 93 ---------------------------------~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~ 139 (327)
T 3aln_A 93 ---------------------------------EGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139 (327)
T ss_dssp ---------------------------------SSEEEEEECCCSEEHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceEEEEeecCCChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHH
Confidence 356899999999998887763 567999999999999999999
Q ss_pred HHHhC-CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC---C
Q 001059 508 HIHGQ-GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG---W 583 (1170)
Q Consensus 508 yLHs~-gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~---~ 583 (1170)
|||++ ||+||||||+|||++.++.+||+|||+++...... ......||+.|+|||++.. .
T Consensus 140 ~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~ 203 (327)
T 3aln_A 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI----------------AKTRDAGCRPYMAPERIDPSASR 203 (327)
T ss_dssp HHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC--------------------------------------------
T ss_pred HHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccc----------------ccccCCCCccccCceeeccccCc
Confidence 99999 99999999999999999999999999997653211 1123479999999999842 2
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----CccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----PSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
..++.++|||||||++|+|++ ||.............. .+..+ ......++++.+||.+||+.||.+|||+.+
T Consensus 204 ~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e 282 (327)
T 3aln_A 204 QGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV-KGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKE 282 (327)
T ss_dssp --CCSHHHHHHHHHHHHHHHHSCCCSSCC-------CCCC-CSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred CCCCchhhHHHHHHHHHHHHHCCCCCCCcchHHHHHHHHh-cCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHH
Confidence 458999999999999999997 7765433222111111 11111 122356789999999999999999999999
Q ss_pred HHhccCCCCch
Q 001059 657 LLQDALPPQME 667 (1170)
Q Consensus 657 iL~~~~~~~~~ 667 (1170)
+++|||+....
T Consensus 283 ll~hp~~~~~~ 293 (327)
T 3aln_A 283 LLKHPFILMYE 293 (327)
T ss_dssp HTTSHHHHHHH
T ss_pred HHhChHHHHhH
Confidence 99999986543
|
| >4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.6e-38 Score=352.69 Aligned_cols=254 Identities=24% Similarity=0.396 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEE----EccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCK----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~----~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.|++++.||+|+||.||+|+ +..+|+.||||+++... .......+.+|+.+|+.++||||++++++|.+.
T Consensus 20 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~--- 95 (302)
T 4e5w_A 20 KRFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPES-GGNHIADLKKEIEILRNLYHENIVKYKGICTED--- 95 (302)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC------CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC----
T ss_pred hhhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccc-cchhHHHHHHHHHHHHhCCCCCeeeeeeEEecC---
Confidence 4679999999999999999999 46689999999997543 223456789999999999999999999988542
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+|||||+ ++|.+++.. ...+++..++.++.||+.||+
T Consensus 96 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~ 140 (302)
T 4e5w_A 96 -----------------------------------GGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMD 140 (302)
T ss_dssp -------------------------------------CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHHHHHHHHHH
Confidence 1345799999996 499999954 456999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... .........||+.|+|||++.+ ..++
T Consensus 141 ~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 207 (302)
T 4e5w_A 141 YLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKE------------YYTVKDDRDSPVFWYAPECLMQ-SKFY 207 (302)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCC------------EEECCCCTTCCGGGCCHHHHHH-CEEE
T ss_pred HhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCc------------ceeccCCCCCCccccCCeeecC-CCCC
Confidence 99999999999999999999999999999999986532210 0112234578999999999987 5688
Q ss_pred ccchhHHHHHHHHHhhc---CC--------------CchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCC
Q 001059 588 EKADMYSLGIVFFELWH---PF--------------STAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf--------------~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
.++|||||||++|+|++ |+ ............+. .....+.....++++.+||.+||+.||.+
T Consensus 208 ~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 286 (302)
T 4e5w_A 208 IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNTLK-EGKRLPCPPNCPDEVYQLMRKCWEFQPSN 286 (302)
T ss_dssp HHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHTTCSSGGG
T ss_pred cchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHHHh-ccCCCCCCCCCCHHHHHHHHHHcCCCCCC
Confidence 99999999999999997 22 22222222233332 23333344567789999999999999999
Q ss_pred CCCHHHHHhc
Q 001059 651 RPSATELLQD 660 (1170)
Q Consensus 651 RPta~eiL~~ 660 (1170)
|||+.++++.
T Consensus 287 Rps~~~ll~~ 296 (302)
T 4e5w_A 287 RTSFQNLIEG 296 (302)
T ss_dssp SCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999874
|
| >4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-38 Score=354.71 Aligned_cols=243 Identities=19% Similarity=0.291 Sum_probs=199.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-------cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeec
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDG-------RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFET 426 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg-------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~ 426 (1170)
.++|++.+.||+|+||+||+|+++.++ ..||+|++... .....+.+.+|+.+++.++||||++++++|.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~- 83 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKA--HRNYSESFFEAASMMSKLSHKHLVLNYGVCVC- 83 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGG--GGGGHHHHHHHHHHHHTSCCTTBCCEEEEECC-
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhcccc--cHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEe-
Confidence 478999999999999999999998877 47999998643 23345789999999999999999999998833
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC-CCHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH-FDKELAWHLFRQIVE 504 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~-l~e~~~~~i~~qI~~ 504 (1170)
....|+|||||+ ++|.+++..... +++..++.++.||+.
T Consensus 84 ---------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~ 124 (289)
T 4fvq_A 84 ---------------------------------------GDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAA 124 (289)
T ss_dssp ---------------------------------------TTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 234589999997 699999987654 999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecCCCC--------EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDARND--------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~~~~--------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
||+|||++||+||||||+|||++.++. +||+|||++...... ....||+.|+|
T Consensus 125 ~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~-------------------~~~~~~~~y~a 185 (289)
T 4fvq_A 125 AMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK-------------------DILQERIPWVP 185 (289)
T ss_dssp HHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCH-------------------HHHHHTTTTSC
T ss_pred HHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCc-------------------cccCCcCcccC
Confidence 999999999999999999999998887 999999999754211 23468899999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
||++.+...++.++|||||||++|||++ |+...................+.. .++++.+||.+||+.||.+|||
T Consensus 186 PE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~li~~~l~~dp~~Rps 262 (289)
T 4fvq_A 186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLPAP---KAAELANLINNCMDYEPDHRPS 262 (289)
T ss_dssp HHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---SSCTTHHHHHHHSCSSGGGSCC
T ss_pred HHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCCCC---CCHHHHHHHHHHcCCChhHCcC
Confidence 9999874568999999999999999997 333333333333333333333432 3457899999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.+++++
T Consensus 263 ~~~ll~~ 269 (289)
T 4fvq_A 263 FRAIIRD 269 (289)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
|
| >1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.5e-38 Score=352.36 Aligned_cols=248 Identities=23% Similarity=0.335 Sum_probs=192.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||+||+|.+..+ +..||+|+++.. ......+.+.+|+.+++.++||||+++++++.
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~------ 86 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------ 86 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC------
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEecccc-CCHHHHHHHHHHHHHHHhCCCCccceEEEEEc------
Confidence 47899999999999999999999754 457999988643 33445678999999999999999999998862
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||++ +|.+++.... .+++..++.++.||+.||+|
T Consensus 87 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~ 131 (281)
T 1mp8_A 87 -----------------------------------ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAY 131 (281)
T ss_dssp -----------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------cCccEEEEecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 1235899999975 9999987654 69999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.
T Consensus 132 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 196 (281)
T 1mp8_A 132 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY--------------YKASKGKLPIKWMAPESINF-RRFTS 196 (281)
T ss_dssp HHHTTCCCSCCSGGGEEEEETTEEEECC---------------------------------CCGGGCCHHHHHH-CCCSH
T ss_pred HHhCCeecccccHHHEEECCCCCEEECccccccccCcccc--------------cccccCCCcccccChhhccc-CCCCC
Confidence 9999999999999999999999999999999987532211 11233467889999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||......+...... ....++.....++++.++|.+||+.||.+|||+.+++++
T Consensus 197 ~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 270 (281)
T 1mp8_A 197 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 270 (281)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999999985 776554443333322 223333445677899999999999999999999999875
|
| >3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-38 Score=365.81 Aligned_cols=261 Identities=17% Similarity=0.278 Sum_probs=197.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-----CcEEEEEEEecCCCChhh---------HHHHHHHHHHHHhccCCCceeE
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-----GRHYAVKKIRLKDKSLPV---------NDRILREVATLSRLQHQHVVRY 419 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-----g~~vAVK~i~~~~~~~~~---------~~~~~~Ev~iL~~l~HpnIV~l 419 (1170)
.++|++.+.||+|+||+||+|.++.+ ++.||||++......... ...+.+|+..++.++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 35899999999999999999999764 578999998754311000 1134456667778889999999
Q ss_pred EEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc-CCCCHHHHHHH
Q 001059 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY-DHFDKELAWHL 498 (1170)
Q Consensus 420 ~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~-~~l~e~~~~~i 498 (1170)
++++.... ....++|+|||||+++|.+++... ..+++..++.+
T Consensus 114 ~~~~~~~~------------------------------------~~~~~~~lv~e~~g~~L~~~~~~~~~~l~~~~~~~i 157 (364)
T 3op5_A 114 WGSGLHDK------------------------------------NGKSYRFMIMDRFGSDLQKIYEANAKRFSRKTVLQL 157 (364)
T ss_dssp EEEEEEEE------------------------------------TTEEEEEEEEECEEEEHHHHHHHTTSCCCHHHHHHH
T ss_pred Eeeeeecc------------------------------------CCcceEEEEEeCCCCCHHHHHHhccCCCCHHHHHHH
Confidence 99985431 123678999999977999999875 57999999999
Q ss_pred HHHHHHHHHHHHhCCccccCCCCCceeec--CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 499 FRQIVEGLAHIHGQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 499 ~~qI~~gL~yLHs~gIiHrDLKp~NILi~--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
+.||+.||+|||++||+||||||+|||++ .++.+||+|||+|+.+......... ........+||+.|+|
T Consensus 158 ~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~a 229 (364)
T 3op5_A 158 SLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAY--------AADPKRCHDGTIEFTS 229 (364)
T ss_dssp HHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCS--------SCCSSCCCCCCTTTCC
T ss_pred HHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCccccc--------ccCcccccCCCCCccC
Confidence 99999999999999999999999999999 8899999999999876433211100 0111244579999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhh--cCCCCCc------cccCCHHHHHHHHHccC
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQ--KGELPPS------WVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~--~~~~p~~------~~~~~~e~~~LI~~~L~ 645 (1170)
||++.+ ..++.++|||||||++|||++ ||............... ...++.. ....++++.++|.+||+
T Consensus 230 PE~~~~-~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~ 308 (364)
T 3op5_A 230 IDAHNG-VAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPAANAPGEIAKYMETVKL 308 (364)
T ss_dssp HHHHTT-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCTTCCCHHHHHHHHHHHT
T ss_pred HHHhCC-CCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhcccccCHHHHHHHHHHHhc
Confidence 999988 568999999999999999997 88753322221111110 0011100 13456799999999999
Q ss_pred CCCCCCCCHHHHHh
Q 001059 646 PSPSDRPSATELLQ 659 (1170)
Q Consensus 646 ~dP~~RPta~eiL~ 659 (1170)
.||.+||++.+|++
T Consensus 309 ~~p~~RP~~~~l~~ 322 (364)
T 3op5_A 309 LDYTEKPLYENLRD 322 (364)
T ss_dssp CCTTCCCCHHHHHH
T ss_pred CCCCCCCCHHHHHH
Confidence 99999999999986
|
| >2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-37 Score=354.56 Aligned_cols=255 Identities=25% Similarity=0.327 Sum_probs=197.2
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.+..+++|++.+.||+|+||.||+|++..+|+.||||++..... .....+.+.+|+.+++.++||||+++++++..
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~--- 105 (309)
T 2h34_A 29 EGTQFGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEI--- 105 (309)
T ss_dssp -----CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE---
T ss_pred CCcEeccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEee---
Confidence 45567899999999999999999999999999999999875432 23345778999999999999999999998743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|++|||+++ +|.+++.....+++..++.++.||+.||+
T Consensus 106 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~ 148 (309)
T 2h34_A 106 -------------------------------------DGQLYVDMRLINGVDLAAMLRRQGPLAPPRAVAIVRQIGSALD 148 (309)
T ss_dssp -------------------------------------TTEEEEEEECCCCEEHHHHHHHHCSCCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCeEEEEEEecCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Confidence 3568999999975 99999998888999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||++........ .......||+.|+|||++.+ ..++
T Consensus 149 ~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~ 213 (309)
T 2h34_A 149 AAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKL--------------TQLGNTVGTLYYMAPERFSE-SHAT 213 (309)
T ss_dssp HHHHTTCCCSCCCGGGEEECTTSCEEECSCCC------------------------------CCGGGCCGGGTCC-----
T ss_pred HHHHCcCCcCCCChHHEEEcCCCCEEEecCccCcccccccc--------------ccccccCCCcCccCHHHHcC-CCCC
Confidence 99999999999999999999999999999999986532210 01234579999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCC-CHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRP-SATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RP-ta~eiL~~ 660 (1170)
.++||||||+++|+|++ ||........ ...+......+ ......++++.++|.+||+.||.+|| +++++++.
T Consensus 214 ~~~Di~slG~il~~l~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~ 290 (309)
T 2h34_A 214 YRADIYALTCVLYECLTGSPPYQGDQLSVM-GAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAA 290 (309)
T ss_dssp CCCHHHHHHHHHHHHHHSSCSSCSCHHHHH-HHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHH
T ss_pred chHhHHHHHHHHHHHHHCCCCCCCchHHHH-HHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHH
Confidence 99999999999999997 7876554422 22222222222 22345667899999999999999999 88888763
|
| >4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=349.76 Aligned_cols=248 Identities=25% Similarity=0.401 Sum_probs=200.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhH-----HHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-----DRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~-----~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
..++|++.+.||+|+||+||+|++..+++.||||++.......... +.+.+|+.+++.++||||+++++++.+
T Consensus 17 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-- 94 (287)
T 4f0f_A 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHN-- 94 (287)
T ss_dssp CSTTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETT--
T ss_pred hhccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecC--
Confidence 3578999999999999999999999999999999987654332222 678999999999999999999988722
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~g 505 (1170)
.. ++||||++ ++|.+.+... ..+++..++.++.||+.|
T Consensus 95 --------------------------------------~~--~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~ 134 (287)
T 4f0f_A 95 --------------------------------------PP--RMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLMLDIALG 134 (287)
T ss_dssp --------------------------------------TT--EEEEECCTTCBHHHHHHCTTSCCCHHHHHHHHHHHHHH
T ss_pred --------------------------------------CC--eEEEEecCCCCHHHHHhcccCCccHHHHHHHHHHHHHH
Confidence 11 69999997 6998877644 469999999999999999
Q ss_pred HHHHHhCC--ccccCCCCCceeecCCCC-----EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 506 LAHIHGQG--IIHRDLTPNNIFFDARND-----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 506 L~yLHs~g--IiHrDLKp~NILi~~~~~-----vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
|+|||++| |+||||||+|||++.++. +||+|||+++.... ......||+.|+|||
T Consensus 135 l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~------------------~~~~~~g~~~y~aPE 196 (287)
T 4f0f_A 135 IEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVH------------------SVSGLLGNFQWMAPE 196 (287)
T ss_dssp HHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSS------------------CEECCCCCCTTSCGG
T ss_pred HHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccc------------------cccccCCCccccCch
Confidence 99999999 999999999999988776 99999999974321 123457999999999
Q ss_pred cccC-CCCCCccchhHHHHHHHHHhhc---CCCchhHHHH-HHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 579 IEQG-WPKIDEKADMYSLGIVFFELWH---PFSTAMERQI-VLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 579 ~l~~-~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~-~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
++.+ ...++.++|||||||++|+|++ ||........ ...........+......++++.++|.+||+.||.+|||
T Consensus 197 ~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 276 (287)
T 4f0f_A 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPH 276 (287)
T ss_dssp GSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCCCCCCCcccCHHHHHHHHHHhcCChhhCcC
Confidence 9843 2447899999999999999997 7765432222 222223334444445567789999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.++++.
T Consensus 277 ~~~ll~~ 283 (287)
T 4f0f_A 277 FSYIVKE 283 (287)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999874
|
| >2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-38 Score=358.77 Aligned_cols=253 Identities=27% Similarity=0.371 Sum_probs=198.1
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhc----cCCCceeEEE
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRL----QHQHVVRYYQ 421 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l----~HpnIV~l~~ 421 (1170)
...+.++|++.+.||+|+||.||+|++..+|+.||||+++...... .....+.+|+.+++++ +||||+++++
T Consensus 26 ~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~ 105 (312)
T 2iwi_A 26 REAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLD 105 (312)
T ss_dssp -------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEE
T ss_pred hhhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEE
Confidence 3556789999999999999999999999999999999997543221 1223466799999999 8999999998
Q ss_pred EEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeec-cC-CcHHHHHHhcCCCCHHHHHHHH
Q 001059 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY-CP-RTLRQVFESYDHFDKELAWHLF 499 (1170)
Q Consensus 422 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy-~~-gsL~~~l~~~~~l~e~~~~~i~ 499 (1170)
++.. ....+++||| +. ++|.+++.....+++..++.++
T Consensus 106 ~~~~----------------------------------------~~~~~~v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~ 145 (312)
T 2iwi_A 106 WFET----------------------------------------QEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFF 145 (312)
T ss_dssp EC---------------------------------------------CEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHH
T ss_pred EEec----------------------------------------CCeEEEEEEecCCCCCHHHHHHhcCCCCHHHHHHHH
Confidence 8732 3456899999 55 6999999988889999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
.||+.||+|||++||+||||||+|||++ .++.+||+|||+++...... .....||+.|+|||
T Consensus 146 ~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~-----------------~~~~~~~~~y~aPE 208 (312)
T 2iwi_A 146 GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP-----------------YTDFDGTRVYSPPE 208 (312)
T ss_dssp HHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC-----------------BCCCCSCTTTSCHH
T ss_pred HHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc-----------------ccccCCcccccCce
Confidence 9999999999999999999999999999 78999999999998653211 13457999999999
Q ss_pred cccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH
Q 001059 579 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655 (1170)
Q Consensus 579 ~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~ 655 (1170)
++.+...++.++|||||||++|+|++ ||..... .......++ ...++++.+||.+||+.||.+|||+.
T Consensus 209 ~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~------~~~~~~~~~---~~~~~~~~~li~~~l~~~p~~Rps~~ 279 (312)
T 2iwi_A 209 WISRHQYHALPATVWSLGILLYDMVCGDIPFERDQE------ILEAELHFP---AHVSPDCCALIRRCLAPKPSSRPSLE 279 (312)
T ss_dssp HHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHTCCCCC---TTSCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred eeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHH------HhhhccCCc---ccCCHHHHHHHHHHccCChhhCcCHH
Confidence 98874444569999999999999997 6654322 111222233 34567999999999999999999999
Q ss_pred HHHhccCCCCchH
Q 001059 656 ELLQDALPPQMEY 668 (1170)
Q Consensus 656 eiL~~~~~~~~~~ 668 (1170)
++++|+|+.....
T Consensus 280 e~l~~~~~~~~~~ 292 (312)
T 2iwi_A 280 EILLDPWMQTPAE 292 (312)
T ss_dssp HHHHSTTTCC---
T ss_pred HHhcChhhcCchh
Confidence 9999999987654
|
| >2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.5e-38 Score=355.79 Aligned_cols=250 Identities=23% Similarity=0.301 Sum_probs=203.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|.+.+.||+|+||.||+|.+. .++..||||+++.. ......+.+.+|+.+|+.++||||++++++|.+
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 97 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKEN-ASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQ--- 97 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCC-CCHHHHHHHHHHHHHHhhCCCCceeeEEEEEec---
Confidence 468999999999999999999983 45689999998743 344556789999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH------------------ 489 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~------------------ 489 (1170)
...+|+|||||+ ++|.+++.....
T Consensus 98 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (314)
T 2ivs_A 98 -------------------------------------DGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLD 140 (314)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHTTTSTTEEC------------
T ss_pred -------------------------------------CCceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccc
Confidence 345699999997 699999976543
Q ss_pred ------CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccc
Q 001059 490 ------FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 563 (1170)
Q Consensus 490 ------l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 563 (1170)
+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... ...
T Consensus 141 ~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~-------------~~~ 207 (314)
T 2ivs_A 141 HPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEED-------------SYV 207 (314)
T ss_dssp ----CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTS-------------CEE
T ss_pred cccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccc-------------cce
Confidence 8999999999999999999999999999999999999999999999999998653221 011
Q ss_pred cCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 001059 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639 (1170)
Q Consensus 564 ~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~L 639 (1170)
......+|+.|+|||++.+ ..++.++|||||||++|||++ ||.......... .+. ....+......++++.++
T Consensus 208 ~~~~~~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~l 284 (314)
T 2ivs_A 208 KRSQGRIPVKWMAIESLFD-HIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFN-LLK-TGHRMERPDNCSEEMYRL 284 (314)
T ss_dssp CSSCCCSCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHH-TTCCCCCCTTCCHHHHHH
T ss_pred eccCCCCcccccChhhhcC-CCcCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-Hhh-cCCcCCCCccCCHHHHHH
Confidence 1234568899999999987 568999999999999999996 665444333322 222 233334445677899999
Q ss_pred HHHccCCCCCCCCCHHHHHhc
Q 001059 640 LRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~ 660 (1170)
|.+||+.||.+|||+.+++++
T Consensus 285 i~~~l~~dp~~Rps~~~l~~~ 305 (314)
T 2ivs_A 285 MLQCWKQEPDKRPVFADISKD 305 (314)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHccCChhhCcCHHHHHHH
Confidence 999999999999999999976
|
| >3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-38 Score=360.53 Aligned_cols=253 Identities=26% Similarity=0.368 Sum_probs=208.0
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhcc--CCCceeEEEEEe
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQ--HQHVVRYYQAWF 424 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~--HpnIV~l~~~~~ 424 (1170)
....++|++.+.||+|+||.||+|++..+|+.||||+++...... .....+.+|+.+++.++ ||||+++++++.
T Consensus 39 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~ 118 (320)
T 3a99_A 39 EPLESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFE 118 (320)
T ss_dssp -CCTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEE
T ss_pred CCccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEe
Confidence 345678999999999999999999999999999999997653321 12245678999999996 599999999873
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC--CcHHHHHHhcCCCCHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQI 502 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~--gsL~~~l~~~~~l~e~~~~~i~~qI 502 (1170)
. ...++++|||+. ++|.+++.....+++..++.++.||
T Consensus 119 ~----------------------------------------~~~~~lv~e~~~~~~~L~~~l~~~~~l~~~~~~~i~~qi 158 (320)
T 3a99_A 119 R----------------------------------------PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQV 158 (320)
T ss_dssp C----------------------------------------SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred c----------------------------------------CCcEEEEEEcCCCCccHHHHHhccCCCCHHHHHHHHHHH
Confidence 2 356899999996 6999999988899999999999999
Q ss_pred HHHHHHHHhCCccccCCCCCceeec-CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 503 VEGLAHIHGQGIIHRDLTPNNIFFD-ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 503 ~~gL~yLHs~gIiHrDLKp~NILi~-~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
+.||+|||++||+||||||+|||++ .++.+||+|||+++..... ......||+.|+|||++.
T Consensus 159 ~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~-----------------~~~~~~gt~~y~aPE~~~ 221 (320)
T 3a99_A 159 LEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----------------VYTDFDGTRVYSPPEWIR 221 (320)
T ss_dssp HHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSS-----------------CBCCCCSCGGGSCHHHHH
T ss_pred HHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccccc-----------------cccCCCCCccCCChHHhc
Confidence 9999999999999999999999999 7799999999999865321 113357999999999988
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHH
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELL 658 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL 658 (1170)
+...++.++|||||||++|||++ ||..... ........+ ...++++.+||.+||+.||.+|||+.+++
T Consensus 222 ~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~------~~~~~~~~~---~~~~~~~~~li~~~l~~dp~~Rps~~~ll 292 (320)
T 3a99_A 222 YHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR---QRVSSECQHLIRWCLALRPSDRPTFEEIQ 292 (320)
T ss_dssp HSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHCCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred cCCCCCccchHHhHHHHHHHHHHCCCCCCChhh------hhccccccc---ccCCHHHHHHHHHHccCChhhCcCHHHHh
Confidence 74445789999999999999997 7754322 111122222 34567999999999999999999999999
Q ss_pred hccCCCCchHH
Q 001059 659 QDALPPQMEYE 669 (1170)
Q Consensus 659 ~~~~~~~~~~~ 669 (1170)
+|+||......
T Consensus 293 ~hp~~~~~~~~ 303 (320)
T 3a99_A 293 NHPWMQDVLLP 303 (320)
T ss_dssp TSGGGSSCCCH
T ss_pred cCHhhcCccCc
Confidence 99999887543
|
| >3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-38 Score=359.85 Aligned_cols=250 Identities=24% Similarity=0.349 Sum_probs=193.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEE----EEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~v----AVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||+||+|++..+|+.+ |+|.++.. ........+.+|+.++++++||||++++++|.+
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~--- 88 (327)
T 3poz_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT--- 88 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC--------CHHHHHHHHHHHHHCCBTTBCCEEEEEES---
T ss_pred CHHHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccc-cCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEec---
Confidence 3578999999999999999999998887764 77766532 223345689999999999999999999998843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+++|+|+. |+|.+++.. ...+++..++.++.||+.||
T Consensus 89 --------------------------------------~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l 130 (327)
T 3poz_A 89 --------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130 (327)
T ss_dssp --------------------------------------SSEEEEEECCTTCBHHHHHHHSTTSCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCeEEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 12578899986 699998876 45699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+|+....... ........||+.|+|||++.+ ..+
T Consensus 131 ~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~-~~~ 196 (327)
T 3poz_A 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIY 196 (327)
T ss_dssp HHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC--------------------CCCGGGSCHHHHHH-CCC
T ss_pred HHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCcc-------------cccccCCCccccccChHHhcc-CCC
Confidence 999999999999999999999999999999999987643211 111234467889999999987 578
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+... .+. ....++.....++++.+++.+||+.||.+|||+.+++++
T Consensus 197 ~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 272 (327)
T 3poz_A 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHH-HHH-TTCCCCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred CchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHH-HHH-cCCCCCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 999999999999999986 665544333222 222 233333444567899999999999999999999999976
|
| >3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=344.87 Aligned_cols=245 Identities=24% Similarity=0.377 Sum_probs=191.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~--~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.++|++.+.||+|+||.||+|.+. |+.||||+++..... ....+.+.+|+.+++.++||||++++++|..
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------ 77 (271)
T 3dtc_A 6 FAELTLEEIIGIGGFGKVYRAFWI--GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLK------ 77 (271)
T ss_dssp TTSEEEEEEEEEETTEEEEEEEET--TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECC------
T ss_pred hhheeeeeeeccCCCeEEEEEEEc--CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEec------
Confidence 478999999999999999999985 899999998754322 2234678899999999999999999998732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++. ...+++..++.++.||+.||+|||
T Consensus 78 ----------------------------------~~~~~lv~e~~~~~~L~~~~~-~~~~~~~~~~~i~~~l~~~l~~lH 122 (271)
T 3dtc_A 78 ----------------------------------EPNLCLVMEFARGGPLNRVLS-GKRIPPDILVNWAVQIARGMNYLH 122 (271)
T ss_dssp ----------------------------------C--CEEEEECCTTEEHHHHHT-SSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceEEEEEcCCCCCHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 58887775 457999999999999999999999
Q ss_pred hCC---ccccCCCCCceeecC--------CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 511 GQG---IIHRDLTPNNIFFDA--------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 511 s~g---IiHrDLKp~NILi~~--------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
++| |+||||||+|||++. ++.+||+|||+++...... .....||+.|+|||+
T Consensus 123 ~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~-----------------~~~~~~~~~y~aPE~ 185 (271)
T 3dtc_A 123 DEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT-----------------KMSAAGAYAWMAPEV 185 (271)
T ss_dssp HSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC------------------------------CCGGGSCHHH
T ss_pred hCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc-----------------ccCCCCccceeCHHH
Confidence 999 899999999999986 6789999999998653211 123479999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
+.+ ..++.++||||||+++|+|++ ||.............. ....++.....++++.++|.+||+.||.+|||+.+
T Consensus 186 ~~~-~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e 263 (271)
T 3dtc_A 186 IRA-SMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAM-NKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTN 263 (271)
T ss_dssp HHH-CCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred hcc-CCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhc-CCCCCCCCcccCHHHHHHHHHHhcCCcccCcCHHH
Confidence 987 568999999999999999997 7876655554444333 22223334556789999999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
++++
T Consensus 264 ~l~~ 267 (271)
T 3dtc_A 264 ILDQ 267 (271)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
|
| >2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=348.32 Aligned_cols=260 Identities=35% Similarity=0.657 Sum_probs=204.3
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++.++|++.+.||+|+||.||+|.+..+|+.||+|+++... ..+.+|+.+++.++||||++++++|......
T Consensus 7 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~------~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~- 79 (284)
T 2a19_B 7 KRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN------EKAEREVKALAKLDHVNIVHYNGCWDGFDYD- 79 (284)
T ss_dssp HHHHHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS------GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-
T ss_pred chhccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc------HHHHHHHHHHHhCCCCCEEEEeeeEeccccC-
Confidence 455678999999999999999999999999999999997532 2467899999999999999999987442100
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--CCCCHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--~~l~e~~~~~i~~qI~~gL~ 507 (1170)
.. .............+|+|||||++ +|.+++... ..+++..++.++.||+.||.
T Consensus 80 --~~---------------------~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~ 136 (284)
T 2a19_B 80 --PE---------------------TSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVD 136 (284)
T ss_dssp --------------------------------CCEEEEEEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHH
T ss_pred --cc---------------------cccccccccCcceEEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHH
Confidence 00 00000111235678999999985 999999754 57999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||++....... ......||+.|+|||++.+ ..++
T Consensus 137 ~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----------------~~~~~~~~~~y~aPE~~~~-~~~~ 199 (284)
T 2a19_B 137 YIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDG----------------KRTRSKGTLRYMSPEQISS-QDYG 199 (284)
T ss_dssp HHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCS----------------CCCCCCSCCTTSCHHHHHC-SCCC
T ss_pred HHHhCCeeeccCCHHHEEEcCCCCEEECcchhheeccccc----------------cccccCCcccccChhhhcc-CCCc
Confidence 9999999999999999999999999999999998653211 1234579999999999987 5689
Q ss_pred ccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 588 EKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
.++|||||||++|+|++...+..........+. ...++. ..++++.++|.+||+.||.+|||+.+++++.
T Consensus 200 ~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l 269 (284)
T 2a19_B 200 KEVDLYALGLILAELLHVCDTAFETSKFFTDLR-DGIISD---IFDKKEKTLLQKLLSKKPEDRPNTSEILRTL 269 (284)
T ss_dssp THHHHHHHHHHHHHHHSCCSSHHHHHHHHHHHH-TTCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred chhhhHHHHHHHHHHHhcCCcchhHHHHHHHhh-cccccc---cCCHHHHHHHHHHccCChhhCcCHHHHHHHH
Confidence 999999999999999984443333322222222 223332 3457899999999999999999999999985
|
| >1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-37 Score=359.73 Aligned_cols=251 Identities=22% Similarity=0.268 Sum_probs=200.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|++. .++..||||+++... .......+.+|+.+|+++ +||||++++++|..
T Consensus 44 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~-- 120 (344)
T 1rjb_A 44 RENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTL-- 120 (344)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred HHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEeccccc-CHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEee--
Confidence 478999999999999999999983 356789999997432 233456799999999999 99999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------ 488 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------ 488 (1170)
...+|+|||||+ ++|.+++....
T Consensus 121 --------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 162 (344)
T 1rjb_A 121 --------------------------------------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEE 162 (344)
T ss_dssp --------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCC---------------
T ss_pred --------------------------------------CCccEEEEecCCCCcHHHHHhhccccccccccchhhhccccc
Confidence 234699999996 59999997643
Q ss_pred -----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccc
Q 001059 489 -----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSV 563 (1170)
Q Consensus 489 -----~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~ 563 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ..
T Consensus 163 ~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------~~ 229 (344)
T 1rjb_A 163 EEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-------------YV 229 (344)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------SE
T ss_pred ccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCcc-------------ce
Confidence 278999999999999999999999999999999999999999999999999986532210 01
Q ss_pred cCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHH
Q 001059 564 DGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESL 639 (1170)
Q Consensus 564 ~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~L 639 (1170)
......||+.|+|||++.+ ..++.++|||||||++|+|++ ||............+. ....++.....++++.+|
T Consensus 230 ~~~~~~~t~~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~l 307 (344)
T 1rjb_A 230 VRGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ-NGFKMDQPFYATEEIYII 307 (344)
T ss_dssp EETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-TTCCCCCCTTCCHHHHHH
T ss_pred eccCccCccCccCHHHhcc-CCCChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHHHh-cCCCCCCCCCCCHHHHHH
Confidence 1233568899999999987 568999999999999999996 7765543333333333 233333344567899999
Q ss_pred HHHccCCCCCCCCCHHHHHhc
Q 001059 640 LRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~ 660 (1170)
|.+||+.||.+|||+.+++++
T Consensus 308 i~~~l~~dp~~Rps~~~l~~~ 328 (344)
T 1rjb_A 308 MQSCWAFDSRKRPSFPNLTSF 328 (344)
T ss_dssp HHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHcCCCchhCcCHHHHHHH
Confidence 999999999999999999986
|
| >3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=361.60 Aligned_cols=250 Identities=23% Similarity=0.351 Sum_probs=203.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-------CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-------GRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
.++|.+.+.||+|+||+||+|++..+ +..||||+++.. ........+.+|+.+++.+ +||||++++++|.+
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~ 146 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 146 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccc-cCHHHHHHHHHHHHHHHHhcCCchhhhheeeecc
Confidence 47899999999999999999998643 357999999744 3444567899999999999 99999999998832
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 488 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 488 (1170)
...+|+|||||+ ++|.+++....
T Consensus 147 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~ 186 (382)
T 3tt0_A 147 ----------------------------------------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 186 (382)
T ss_dssp ----------------------------------------SSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCC
T ss_pred ----------------------------------------CCceEEEEEecCCCcHHHHHHHhccccccccccccccccc
Confidence 344699999996 59999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+....... .......
T Consensus 187 ~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~-------------~~~~~~~ 253 (382)
T 3tt0_A 187 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-------------YKKTTNG 253 (382)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCT-------------TCCCTTC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccc-------------cccccCC
Confidence 499999999999999999999999999999999999999999999999999986532210 0112345
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.||+.|+|||++.+ ..++.++|||||||++|||++ ||......+.... +. ....+......++++.+||.+||
T Consensus 254 ~~t~~y~aPE~~~~-~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l 330 (382)
T 3tt0_A 254 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL-LK-EGHRMDKPSNCTNELYMMMRDCW 330 (382)
T ss_dssp CCGGGGSCHHHHHS-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH-HH-TTCCCCCCSSCCHHHHHHHHHHT
T ss_pred CCCcceeCHHHhcC-CCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH-HH-cCCCCCCCccCCHHHHHHHHHHc
Confidence 68899999999987 578999999999999999986 6665544443332 22 23333334567789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.||.+|||+.+++++
T Consensus 331 ~~dP~~Rps~~ell~~ 346 (382)
T 3tt0_A 331 HAVPSQRPTFKQLVED 346 (382)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCChhhCcCHHHHHHH
Confidence 9999999999999986
|
| >1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=349.65 Aligned_cols=250 Identities=22% Similarity=0.284 Sum_probs=201.3
Q ss_pred CCceEEe-eeccCCcEEEEEEEE--ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQ-PLGHGGFGHVVLCKN--KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~-~LG~G~fG~Vyka~~--~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+ .||+|+||+||+|.+ ..+++.||||+++.........+.+.+|+.+++.++||||+++++++ +
T Consensus 16 ~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~------ 88 (291)
T 1xbb_A 16 KLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-E------ 88 (291)
T ss_dssp GGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-E------
T ss_pred hhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-C------
Confidence 5789988 999999999999965 55688999999976555555567899999999999999999999887 2
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+||||++ ++|.+++.....+++..++.++.||+.||+|||
T Consensus 89 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~~qi~~~l~~LH 134 (291)
T 1xbb_A 89 ----------------------------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLE 134 (291)
T ss_dssp ----------------------------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHHHHHHHHHHHHH
Confidence 234689999997 599999998888999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++.++
T Consensus 135 ~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 201 (291)
T 1xbb_A 135 ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN------------YYKAQTHGKWPVKWYAPECINY-YKFSSKS 201 (291)
T ss_dssp HTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCS------------EEEC----CCCGGGCCHHHHHH-CEEEHHH
T ss_pred hCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCC------------cccccccCCCCceeeChHHhcc-CCCChhh
Confidence 99999999999999999999999999999986532210 0111233457899999999987 4688999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|+|++ ||......+...... ....+......++++.++|.+||+.||.+|||+.++++.
T Consensus 202 Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 273 (291)
T 1xbb_A 202 DVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 273 (291)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999996 776655544433322 233334445677899999999999999999999999864
|
| >2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=348.60 Aligned_cols=252 Identities=27% Similarity=0.501 Sum_probs=193.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC-CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~-~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
..+++|++.+.||+|+||.||+|.+..+|+.||||+++... ........+.+|+.+++.++||||++++++|.+
T Consensus 29 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 103 (310)
T 2wqm_A 29 NTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIE----- 103 (310)
T ss_dssp SSGGGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE-----
T ss_pred ccccceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEc-----
Confidence 34678999999999999999999999999999999997643 334456778999999999999999999998843
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|++|||+++ +|.+++.. ...+++..++.++.||+.|
T Consensus 104 -----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~ 148 (310)
T 2wqm_A 104 -----------------------------------DNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA 148 (310)
T ss_dssp -----------------------------------TTEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHH
Confidence 3568999999975 99988864 4569999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|.|||++||+||||||+|||++.++.+||+|||++....... .......||+.|+|||++.+ ..
T Consensus 149 l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~---------------~~~~~~~~~~~y~aPE~~~~-~~ 212 (310)
T 2wqm_A 149 LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKT---------------TAAHSLVGTPYYMSPERIHE-NG 212 (310)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------------------------------CCSSCCHHHHTT-CC
T ss_pred HHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCC---------------ccccccCCCeeEeChHHhCC-CC
Confidence 999999999999999999999999999999999998653211 01133579999999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.++|||||||++|+|++ ||..... .......+. ....++ .....++++.+||.+||+.||.+|||+.+++++
T Consensus 213 ~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~ 291 (310)
T 2wqm_A 213 YNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIE-QCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDV 291 (310)
T ss_dssp CCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHH-TTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhh-cccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence 8999999999999999997 7754321 112222222 223332 234567899999999999999999999999974
|
| >1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-37 Score=351.96 Aligned_cols=251 Identities=25% Similarity=0.297 Sum_probs=202.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEE-----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN-----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~-----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|.+ ..+++.||||+++.. ......+.+.+|+.+++++ +||||++++++|..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~-- 98 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPS-AHLTEREALMSELKVLSYLGNHMNIVNLLGACTI-- 98 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcc-hhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEec--
Confidence 36899999999999999999996 356789999999744 3334557899999999999 99999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC------------------
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD------------------ 488 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~------------------ 488 (1170)
....|+|||||++ +|.+++....
T Consensus 99 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 140 (313)
T 1t46_A 99 --------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDEL 140 (313)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTC--------------C
T ss_pred --------------------------------------CCCcEEEEecCCCCCHHHHHHhcccccccccccccccccccc
Confidence 2346899999975 9999987653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 141 ~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~ 207 (313)
T 1t46_A 141 ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSN-------------YVVKGNA 207 (313)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTT-------------SEECSSS
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEcccccccccccccc-------------ceeccCC
Confidence 489999999999999999999999999999999999999999999999999986532210 0112335
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.||+.|+|||++.+ ..++.++|||||||++|+|++ ||............+.. ...+......++++.++|.+||
T Consensus 208 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l 285 (313)
T 1t46_A 208 RLPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE-GFRMLSPEHAPAEMYDIMKTCW 285 (313)
T ss_dssp EECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHH-TCCCCCCTTSCHHHHHHHHHHT
T ss_pred CCcceeeChHHhcC-CCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHHHHhcc-CCCCCCcccCCHHHHHHHHHHc
Confidence 68899999999887 568999999999999999986 66554333333333332 2223333456789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.||.+|||+.+++++
T Consensus 286 ~~dp~~Rps~~ell~~ 301 (313)
T 1t46_A 286 DADPLKRPTFKQIVQL 301 (313)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred CCCchhCcCHHHHHHH
Confidence 9999999999999975
|
| >2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-37 Score=354.25 Aligned_cols=252 Identities=23% Similarity=0.336 Sum_probs=203.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|++. .+++.||||+++.. ........+.+|+.+++++ +||||++++++|...
T Consensus 26 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~- 103 (316)
T 2xir_A 26 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP- 103 (316)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCT-
T ss_pred hhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccC-CCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecC-
Confidence 468999999999999999999963 46789999999744 3334556789999999999 799999999987432
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC----------------C
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH----------------F 490 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~----------------l 490 (1170)
...+|++||||++ +|.+++..... +
T Consensus 104 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 145 (316)
T 2xir_A 104 --------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFL 145 (316)
T ss_dssp --------------------------------------TSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCE
T ss_pred --------------------------------------CCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhcccc
Confidence 2347999999974 99999986543 8
Q ss_pred CHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccccc
Q 001059 491 DKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570 (1170)
Q Consensus 491 ~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 570 (1170)
++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++...... .........|
T Consensus 146 ~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~~~ 212 (316)
T 2xir_A 146 TLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARL 212 (316)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCT-------------TSEEETTEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCc-------------cceeccCCCc
Confidence 999999999999999999999999999999999999999999999999998653211 0111234568
Q ss_pred CccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCC
Q 001059 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 571 T~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
|+.|+|||++.+ ..++.++|||||||++|+|++ ||............+.. +..+......++++.++|.+||+.
T Consensus 213 t~~y~aPE~~~~-~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~ 290 (316)
T 2xir_A 213 PLKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKE-GTRMRAPDYTTPEMYQTMLDCWHG 290 (316)
T ss_dssp CGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCS
T ss_pred ceeecCchhhcc-ccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHHhcc-CccCCCCCCCCHHHHHHHHHHcCC
Confidence 999999999987 568999999999999999996 77554433333333332 222333345678999999999999
Q ss_pred CCCCCCCHHHHHhc
Q 001059 647 SPSDRPSATELLQD 660 (1170)
Q Consensus 647 dP~~RPta~eiL~~ 660 (1170)
||.+|||+.++++|
T Consensus 291 dp~~Rps~~ell~~ 304 (316)
T 2xir_A 291 EPSQRPTFSELVEH 304 (316)
T ss_dssp SGGGSCCHHHHHHH
T ss_pred ChhhCcCHHHHHHH
Confidence 99999999999987
|
| >3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=7.4e-38 Score=358.76 Aligned_cols=249 Identities=20% Similarity=0.272 Sum_probs=197.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcE----EEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRH----YAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~----vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++++.||+|+||+||+|++..+|+. ||+|.+.... .......+.+|+.+++.++||||++++++|.
T Consensus 12 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~-~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~----- 85 (325)
T 3kex_A 12 ETELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKS-GRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP----- 85 (325)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTT-SCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-----
T ss_pred HhHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccc-cHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-----
Confidence 47899999999999999999999888876 7777765332 2223346788999999999999999998862
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+++|||||+ ++|.+++... ..+++..++.++.||+.||+
T Consensus 86 ------------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~ 129 (325)
T 3kex_A 86 ------------------------------------GSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMY 129 (325)
T ss_dssp ------------------------------------BSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHHHHHHHHHH
Confidence 234789999997 6999988764 57999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..++
T Consensus 130 ~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~-~~~~ 195 (325)
T 3kex_A 130 YLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDK-------------QLLYSEAKTPIKWMALESIHF-GKYT 195 (325)
T ss_dssp HHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTT-------------CCC-----CCTTTSCHHHHHH-CCCC
T ss_pred HHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccc-------------cccccCCCCcccccChHHhcc-CCCC
Confidence 99999999999999999999999999999999987532210 111234578889999999987 5689
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.++|||||||++|+|++ ||......+...... ....+......++++.++|.+||+.||.+|||+.+++++
T Consensus 196 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~ 270 (325)
T 3kex_A 196 HQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE--KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANE 270 (325)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHH--TTCBCCCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred hhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHH--cCCCCCCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 99999999999999986 776544333332222 222222233455688999999999999999999999986
|
| >3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=347.24 Aligned_cols=251 Identities=25% Similarity=0.356 Sum_probs=193.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++. ..||||+++.........+.+.+|+.+|+.++||||+++++++.
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~---~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------- 90 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST-------- 90 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS---SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC--------
T ss_pred CccceeeeeEecCCCCeEEEEEEEc---CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeecc--------
Confidence 3468999999999999999999865 35999999877666666788999999999999999999998541
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+++|||||+ ++|.+++.. ...+++..++.++.||+.||+|||
T Consensus 91 ---------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~L~~lH 137 (289)
T 3og7_A 91 ---------------------------------APQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLH 137 (289)
T ss_dssp ---------------------------------SSSCEEEEECCCEEEHHHHHTTC---CCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCccEEEEEecCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 234689999997 599998864 456999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCCCCc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPKIDE 588 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~~~~ 588 (1170)
++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.. ...++.
T Consensus 138 ~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~ 204 (289)
T 3og7_A 138 AKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSG-------------SHQFEQLSGSILWMAPEVIRMQDSNPYSF 204 (289)
T ss_dssp HTTCCCSCCCGGGEEEETTTEEEECCCC-------------------------------CCCTTCCHHHHC----CCSCH
T ss_pred hCCcccccCccceEEECCCCCEEEccceeccccccccc-------------cccccccCCCccccCchhhcccCCCCCCc
Confidence 99999999999999999999999999999986532110 011234579999999999862 245788
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC---CCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL---PPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~---p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|+|++ ||............+...... +.....+++++.+||.+||+.||.+|||+.++++.
T Consensus 205 ~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 282 (289)
T 3og7_A 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAE 282 (289)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHH
Confidence 9999999999999997 887655544444444322221 22234567899999999999999999999999874
|
| >1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-37 Score=370.41 Aligned_cols=241 Identities=24% Similarity=0.384 Sum_probs=198.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. |+.||||+++... ..+.+.+|+.+|++++||||+++++++.+.
T Consensus 192 ~~~~~~~~~lG~G~fg~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~------- 258 (450)
T 1k9a_A 192 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 258 (450)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET--TEEEEEEEESSCT----TSHHHHHHHHHHHTCCCTTBCCEEEEEECT-------
T ss_pred hHHeEEEeeecCcCCeeEEEEEec--CCeEEEEEeCCch----HHHHHHHHHHHHHhccCCCEEEEEEEEEcC-------
Confidence 478999999999999999999986 8899999997432 346799999999999999999999987432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ |+|.+++...+. +++..++.++.||+.||+|||
T Consensus 259 --------------------------------~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH 306 (450)
T 1k9a_A 259 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 306 (450)
T ss_dssp --------------------------------TSCEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 235799999996 599999987654 799999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++..... .....+|+.|+|||++.+ ..++.++
T Consensus 307 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~s 367 (450)
T 1k9a_A 307 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 367 (450)
T ss_dssp HTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------------------------CCCTTTSCHHHHHS-SCCCHHH
T ss_pred hCCeeCCCCCHhhEEECCCCCEEEeeCCCccccccc------------------ccCCCCCcceeCHHHhcC-CCCCcHH
Confidence 999999999999999999999999999999743211 122367889999999987 5799999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+...... .+..++....+++++.+||.+||+.||.+|||+.++++.
T Consensus 368 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~ 439 (450)
T 1k9a_A 368 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE--KGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQ 439 (450)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999996 776544433333222 233333445677899999999999999999999999863
|
| >1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-37 Score=368.63 Aligned_cols=244 Identities=25% Similarity=0.332 Sum_probs=201.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. ++..||||+++.... ..+.+.+|+.+|+.++||||+++++++.
T Consensus 187 ~~~~~~~~~lG~G~fg~V~~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~iv~l~~~~~--------- 253 (454)
T 1qcf_A 187 RESLKLEKKLGAGQFGEVWMATYN-KHTKVAVKTMKPGSM---SVEAFLAEANVMKTLQHDKLVKLHAVVT--------- 253 (454)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEET-TTEEEEEEEECTTSB---CHHHHHHHHHHHTTCCCTTBCCEEEEEC---------
T ss_pred hHHeEEEEEcccCCceEEEEEEEC-CccEEEEEEecCCCc---cHHHHHHHHHHHhhCCCCCEeeEEEEEe---------
Confidence 468999999999999999999997 578899999975432 3568999999999999999999998862
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 254 --------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH 301 (454)
T 1qcf_A 254 --------------------------------KEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE 301 (454)
T ss_dssp --------------------------------SSSCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 124689999996 6999999754 36899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++........ ......+|+.|+|||++.+ ..++.++
T Consensus 302 ~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~--------------~~~~~~~~~~y~aPE~~~~-~~~~~~~ 366 (454)
T 1qcf_A 302 QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT--------------AREGAKFPIKWTAPEAINF-GSFTIKS 366 (454)
T ss_dssp HTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH--------------TTCSSSSCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee--------------ccCCCcccccccCHHHhcc-CCCCcHH
Confidence 999999999999999999999999999999875422111 1123457889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|||++ ||......+....... +..++....+++++.+||.+||+.||.+|||+.+|++
T Consensus 367 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~ 437 (454)
T 1qcf_A 367 DVWSFGILLMEIVTYGRIPYPGMSNPEVIRALER--GYRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQS 437 (454)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99999999999997 7766555544433322 2233334567789999999999999999999999986
|
| >3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=357.95 Aligned_cols=256 Identities=24% Similarity=0.359 Sum_probs=180.9
Q ss_pred CccccCCceEEe-eeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHH-HHHHhccCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEELQ-PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV-ATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~~-~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev-~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
.....++|.+.+ .||+|+||+||+|+++.+|+.||||++... . ...+|+ ..++.+.||||++++++|....
T Consensus 23 ~~~~~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~----~~~~e~~~~~~~~~h~~i~~~~~~~~~~~ 95 (336)
T 3fhr_A 23 KYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS---P----KARQEVDHHWQASGGPHIVCILDVYENMH 95 (336)
T ss_dssp CSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS---H----HHHHHHHHHHHHTTSTTBCCEEEEEEEEE
T ss_pred CccccceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc---H----HHHHHHHHHHHhcCCCChHHHHHHHhhcc
Confidence 345668999966 599999999999999999999999998632 1 222333 3456679999999999874320
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC--CCCHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQIVE 504 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~qI~~ 504 (1170)
.....+|+|||||++ +|.+++.... .+++.+++.++.||+.
T Consensus 96 ------------------------------------~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~ 139 (336)
T 3fhr_A 96 ------------------------------------HGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGT 139 (336)
T ss_dssp ------------------------------------TTEEEEEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCceEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 124568999999975 9999998654 6999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||+|||++||+||||||+|||++. ++.+||+|||+++..... .....+||+.|+|||++.
T Consensus 140 ~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~-----------------~~~~~~~t~~y~aPE~~~ 202 (336)
T 3fhr_A 140 AIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQN-----------------ALQTPCYTPYYVAPEVLG 202 (336)
T ss_dssp HHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--------------------------------------
T ss_pred HHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceecccc-----------------ccccCCCCcCccChhhhC
Confidence 999999999999999999999986 455999999999754311 113457899999999997
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHH----HHHhhhcCC-CCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIV----LSDLKQKGE-LPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~----~~~l~~~~~-~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
+ ..++.++|||||||++|+|++ ||......... ......... ..+.+...++++.+||.+||+.||.+|||
T Consensus 203 ~-~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt 281 (336)
T 3fhr_A 203 P-EKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLT 281 (336)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCC
T ss_pred C-CCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcC
Confidence 6 568999999999999999997 77554433221 111111112 22344567889999999999999999999
Q ss_pred HHHHHhccCCCCc
Q 001059 654 ATELLQDALPPQM 666 (1170)
Q Consensus 654 a~eiL~~~~~~~~ 666 (1170)
+.++++|||+.+.
T Consensus 282 ~~ell~hp~~~~~ 294 (336)
T 3fhr_A 282 ITQFMNHPWINQS 294 (336)
T ss_dssp HHHHHHSHHHHTG
T ss_pred HHHHhcCcccccc
Confidence 9999999998764
|
| >2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-37 Score=363.74 Aligned_cols=253 Identities=21% Similarity=0.301 Sum_probs=193.8
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
...++|++.+.||+|+||+||+|+++ .++..||||+++... .....+.+.+|+.+|++++||||+++++++.+
T Consensus 42 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~--- 117 (373)
T 2qol_A 42 LDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGY-TEKQRRDFLGEASIMGQFDHPNIIRLEGVVTK--- 117 (373)
T ss_dssp CCGGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS---
T ss_pred cCHhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCcc-CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---
Confidence 34568999999999999999999987 467789999987542 34456689999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++.... .+++.+++.++.||+.||
T Consensus 118 -------------------------------------~~~~~lv~e~~~~~sL~~~l~~~~~~~~~~~~~~i~~qi~~aL 160 (373)
T 2qol_A 118 -------------------------------------SKPVMIVTEYMENGSLDSFLRKHDAQFTVIQLVGMLRGIASGM 160 (373)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCSCHHHHHHHHHHHHHHH
T ss_pred -------------------------------------CCceEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHH
Confidence 345699999996 69999997654 699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..+
T Consensus 161 ~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~ 227 (373)
T 2qol_A 161 KYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE------------AAYTTRGGKIPIRWTSPEAIAY-RKF 227 (373)
T ss_dssp HHHHHTTCCCSCCCGGGEEECTTCCEEECCC----------------------------------CTTSCHHHHHH-CCC
T ss_pred HHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc------------cceeccCCCcCCCccChhhhcc-CCc
Confidence 999999999999999999999999999999999987542210 0011123356889999999987 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+....... ...++.....++++.++|.+||+.||.+||++.++++.
T Consensus 228 ~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~ 303 (373)
T 2qol_A 228 TSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDE--GYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSI 303 (373)
T ss_dssp CHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHT--TEECCCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc--CCCCCCCccccHHHHHHHHHHhCcChhhCcCHHHHHHH
Confidence 999999999999999885 7766555444333322 22222334567899999999999999999999999864
|
| >1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=351.97 Aligned_cols=250 Identities=21% Similarity=0.285 Sum_probs=204.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
.++|++.+.||+|+||.||+|.++ .+++.||||++... ........+.+|+.+++.++||||+++++++.+
T Consensus 24 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~--- 99 (322)
T 1p4o_A 24 REKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ--- 99 (322)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS---
T ss_pred hhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccc-cCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEcc---
Confidence 468999999999999999999987 45789999998743 334455678999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------CCCCHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWH 497 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~ 497 (1170)
....|+|||||+ ++|.+++... ..+++..++.
T Consensus 100 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 142 (322)
T 1p4o_A 100 -------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQ 142 (322)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHH
T ss_pred -------------------------------------CCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHH
Confidence 345689999997 5999988653 3579999999
Q ss_pred HHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCc
Q 001059 498 LFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577 (1170)
Q Consensus 498 i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~AP 577 (1170)
++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........ .......||+.|+||
T Consensus 143 i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~aP 209 (322)
T 1p4o_A 143 MAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYY-------------RKGGKGLLPVRWMSP 209 (322)
T ss_dssp HHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCE-------------EGGGSSEECGGGCCH
T ss_pred HHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCcccccccccccc-------------ccccCCCCCCCccCh
Confidence 9999999999999999999999999999999999999999999865432211 112334689999999
Q ss_pred ccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 578 EIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 578 E~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
|++.+ ..++.++|||||||++|+|++ ||......+...... ....++.....++.+.+||.+||+.||.+|||
T Consensus 210 E~~~~-~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps 286 (322)
T 1p4o_A 210 ESLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM--EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPS 286 (322)
T ss_dssp HHHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhhcc-CCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHH--cCCcCCCCCCCCHHHHHHHHHHcCCCcccCcC
Confidence 99987 568999999999999999986 666554444433332 23333444567789999999999999999999
Q ss_pred HHHHHhc
Q 001059 654 ATELLQD 660 (1170)
Q Consensus 654 a~eiL~~ 660 (1170)
+.+++++
T Consensus 287 ~~e~l~~ 293 (322)
T 1p4o_A 287 FLEIISS 293 (322)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999986
|
| >3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-37 Score=370.43 Aligned_cols=256 Identities=29% Similarity=0.402 Sum_probs=192.1
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.+|++.+.||+|+||+||. ....+|+.||||++..... ..+.+|+.+|+.+ +|||||++++++.+
T Consensus 24 ~~y~~~~~LG~G~~G~V~~-~~~~~~~~vAvK~~~~~~~-----~~~~~E~~~l~~l~~HpnIv~l~~~~~~-------- 89 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVY-RGMFDNRDVAVKRILPECF-----SFADREVQLLRESDEHPNVIRYFCTEKD-------- 89 (432)
T ss_dssp EEEEEEEEEEECGGGCEEE-EEESSSSEEEEEEECTTTE-----EECHHHHHHHHHSCCCTTBCCEEEEEEE--------
T ss_pred EEEecCCeeecCcCEEEEE-EEEeCCeEEEEEEECHHHH-----HHHHHHHHHHHhccCCCCcCeEEEEEec--------
Confidence 3689999999999999764 4455899999999864322 2356899999999 89999999988732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+++|.+++.... .+.+..++.++.||+.||+|||++
T Consensus 90 --------------------------------~~~~~lv~E~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~ 137 (432)
T 3p23_A 90 --------------------------------RQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSL 137 (432)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHSSSCCCCSSCHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEEECCCCCHHHHHHhcCCCccchhHHHHHHHHHHHHHHHHHC
Confidence 45789999999999999997654 456667789999999999999999
Q ss_pred CccccCCCCCceeecC-----CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--CCC
Q 001059 513 GIIHRDLTPNNIFFDA-----RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG--WPK 585 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~-----~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~--~~~ 585 (1170)
||+||||||+|||++. ...+||+|||+|+........ ....+..+||+.|+|||++.+ ...
T Consensus 138 ~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~------------~~~~~~~~gt~~y~APE~l~~~~~~~ 205 (432)
T 3p23_A 138 NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHS------------FSRRSGVPGTEGWIAPEMLSEDCKEN 205 (432)
T ss_dssp TCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------------------CCSCTTSCCGGGTSCC---C
T ss_pred cCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcc------------eeeccccCCCcCccChhhhhcccccC
Confidence 9999999999999953 235889999999865422100 012245689999999999974 245
Q ss_pred CCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
++.++|||||||++|||++ ||..........................++.+.+||.+||+.||.+|||+.++++||
T Consensus 206 ~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp 285 (432)
T 3p23_A 206 PTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHP 285 (432)
T ss_dssp CCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTST
T ss_pred CCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCc
Confidence 7889999999999999997 665444333322211111111111122334678999999999999999999999999
Q ss_pred CCCCchH
Q 001059 662 LPPQMEY 668 (1170)
Q Consensus 662 ~~~~~~~ 668 (1170)
||....+
T Consensus 286 ~f~~~~~ 292 (432)
T 3p23_A 286 FFWSLEK 292 (432)
T ss_dssp TTCCHHH
T ss_pred cccChHH
Confidence 9998765
|
| >2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.2e-37 Score=350.78 Aligned_cols=240 Identities=30% Similarity=0.465 Sum_probs=191.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++. ++.||||++... ...+.+.+|+.+|++++||||+++++++.
T Consensus 7 ~~~~~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~----~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--------- 71 (307)
T 2eva_A 7 YKEIEVEEVVGRGAFGVVCKAKWR--AKDVAIKQIESE----SERKAFIVELRQLSRVNHPNIVKLYGACL--------- 71 (307)
T ss_dssp GGGEEEEEEEECCSSSEEEEEEET--TEEEEEEECSST----THHHHHHHHHHHHHHCCCTTBCCEEEBCT---------
T ss_pred HhHeeeeeEeecCCCceEEEEEEC--CeeEEEEEecCh----hHHHHHHHHHHHHhcCCCCCcCeEEEEEc---------
Confidence 468999999999999999999985 889999998532 34567899999999999999999998762
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...|+|||||+ ++|.+++.... .++...++.++.||+.||+||
T Consensus 72 ---------------------------------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~L 118 (307)
T 2eva_A 72 ---------------------------------NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYL 118 (307)
T ss_dssp ---------------------------------TTTEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCcEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHH
Confidence 12489999996 59999998655 378999999999999999999
Q ss_pred Hh---CCccccCCCCCceeecCCCC-EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 510 HG---QGIIHRDLTPNNIFFDARND-IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 510 Hs---~gIiHrDLKp~NILi~~~~~-vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+ +||+||||||+|||++.++. +||+|||+++..... .....||+.|+|||++.+ ..
T Consensus 119 H~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~------------------~~~~~gt~~y~aPE~~~~-~~ 179 (307)
T 2eva_A 119 HSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTH------------------MTNNKGSAAWMAPEVFEG-SN 179 (307)
T ss_dssp HTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------------------------CCTTSSCHHHHTC-CC
T ss_pred HhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccc------------------cccCCCCCceEChhhhCC-CC
Confidence 99 89999999999999998886 799999999754211 123469999999999987 57
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.++|||||||++|||++ ||...................++.....++.+.++|.+||+.||.+|||+.+++++
T Consensus 180 ~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 257 (307)
T 2eva_A 180 YSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKI 257 (307)
T ss_dssp CCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTCCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCCCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence 8999999999999999997 77643222111111122344455556778899999999999999999999999975
|
| >2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-37 Score=357.72 Aligned_cols=262 Identities=18% Similarity=0.246 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChh---------hHHHHHHHHHHHHhccCCCceeEEE
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLP---------VNDRILREVATLSRLQHQHVVRYYQ 421 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~---------~~~~~~~Ev~iL~~l~HpnIV~l~~ 421 (1170)
.++|++.+.||+|+||+||+|++.. ++..||||++........ ....+.+|+..++.++||||+++++
T Consensus 36 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~ 115 (345)
T 2v62_A 36 GNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYG 115 (345)
T ss_dssp SCEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEE
T ss_pred CceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeec
Confidence 3679999999999999999999987 788999999875432111 1124668889999999999999999
Q ss_pred EEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHH
Q 001059 422 AWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQ 501 (1170)
Q Consensus 422 ~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~q 501 (1170)
++.... .....+|+|||||+++|.+++...+.+++..++.++.|
T Consensus 116 ~~~~~~------------------------------------~~~~~~~lv~e~~~~~L~~~l~~~~~~~~~~~~~i~~q 159 (345)
T 2v62_A 116 SGLTEF------------------------------------KGRSYRFMVMERLGIDLQKISGQNGTFKKSTVLQLGIR 159 (345)
T ss_dssp EEEEES------------------------------------SSCEEEEEEEECEEEEHHHHCBGGGBCCHHHHHHHHHH
T ss_pred cccccc------------------------------------CCCcEEEEEEeccCCCHHHHHHhcCCCCHHHHHHHHHH
Confidence 985420 12467899999997799999988778999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecCCC--CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
|+.||+|||++||+||||||+|||++.++ .+||+|||+|+.+......... .........||+.|+|||+
T Consensus 160 i~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~ 231 (345)
T 2v62_A 160 MLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQY--------QENPRKGHNGTIEFTSLDA 231 (345)
T ss_dssp HHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCC--------CCCGGGCSCSCTTTCCHHH
T ss_pred HHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccc--------hhccccccCCCccccCHHH
Confidence 99999999999999999999999999877 9999999999876433211000 0111245689999999999
Q ss_pred ccCCCCCCccchhHHHHHHHHHhhc---CCCchhH--HHHHHHHhhhcCCCCCcc------ccCCHHHHHHHHHccCCCC
Q 001059 580 EQGWPKIDEKADMYSLGIVFFELWH---PFSTAME--RQIVLSDLKQKGELPPSW------VAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 580 l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~--~~~~~~~l~~~~~~p~~~------~~~~~e~~~LI~~~L~~dP 648 (1170)
+.+ ..++.++|||||||++|||++ ||..... .............+|... ...++++.++|.+||+.||
T Consensus 232 ~~~-~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp 310 (345)
T 2v62_A 232 HKG-VALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAY 310 (345)
T ss_dssp HHT-CCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCT
T ss_pred hcC-CCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccccHHHHhhccccccHHHHHHHHHHHhhcCc
Confidence 998 568999999999999999997 8854221 111111111112222211 1567799999999999999
Q ss_pred CCCCCHHHHHhc
Q 001059 649 SDRPSATELLQD 660 (1170)
Q Consensus 649 ~~RPta~eiL~~ 660 (1170)
.+|||+.++++.
T Consensus 311 ~~Rps~~~l~~~ 322 (345)
T 2v62_A 311 DEKPNYQALKKI 322 (345)
T ss_dssp TCCCCHHHHHHH
T ss_pred ccCCCHHHHHHH
Confidence 999999999874
|
| >3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-37 Score=344.39 Aligned_cols=256 Identities=23% Similarity=0.244 Sum_probs=200.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++...... ..+.+|+.+++.++|++++..+..+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~------- 75 (296)
T 3uzp_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA------- 75 (296)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCSSC----CHHHHHHHHHHHHTTSTTCCCEEEEEE-------
T ss_pred eccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcch----hHHHHHHHHHHHhhcCCCCCccccccC-------
Confidence 457899999999999999999999999999999998754332 358899999999999988877665532
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.....|++|||++++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 76 --------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~ 123 (296)
T 3uzp_A 76 --------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123 (296)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCceEEEEEecCCCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2457899999998899999974 4579999999999999999999999
Q ss_pred CCccccCCCCCceeec---CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 512 QGIIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
+||+||||||+|||++ .++.+||+|||+++........... .........||+.|+|||++.+ ..++.
T Consensus 124 ~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~~-~~~~~ 194 (296)
T 3uzp_A 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHI--------PYRENKNLTGTARYASINTHLG-IEQSR 194 (296)
T ss_dssp TTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC--------CCCCSCCCCSCTTTCCHHHHTT-CCCCH
T ss_pred CCeeeCCCCHHHeEEecCCCCCeEEEeeCCCccccccccccccc--------ccccccccccccccCChhhhcC-CCCCc
Confidence 9999999999999994 7889999999999876432211000 0011245689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||..... .+........ ....+......++++.++|.+||+.||.+|||+.++++.
T Consensus 195 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~ 274 (296)
T 3uzp_A 195 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred chhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHH
Confidence 9999999999999997 7764211 1111111111 111111224567799999999999999999999999864
|
| >3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-37 Score=346.78 Aligned_cols=247 Identities=23% Similarity=0.296 Sum_probs=202.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.++.++..||+|++... ....+.+.+|+.+++.++||||+++++++..
T Consensus 12 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~---~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-------- 80 (288)
T 3kfa_A 12 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED---TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 80 (288)
T ss_dssp GGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSC---STHHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred ccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcC---HHHHHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 47899999999999999999999999999999999743 2345678999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 81 --------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH 128 (288)
T 3kfa_A 81 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 128 (288)
T ss_dssp --------------------------------SSSEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHH
Confidence 345799999997 5999999764 34999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++....... ........+|+.|+|||++.+ ..++.++
T Consensus 129 ~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 193 (288)
T 3kfa_A 129 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 193 (288)
T ss_dssp HHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSS--------------SEEETTEEECGGGCCHHHHHH-CCCCHHH
T ss_pred HCCccCCCCCcceEEEcCCCCEEEccCccceeccCCc--------------cccccCCccccCcCChhhhcc-CCCCchh
Confidence 9999999999999999999999999999998653221 011233467889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|+|++ ||.......... .+. ....++.....++++.+||++||+.||.+|||+.++++.
T Consensus 194 Di~slG~il~~ll~~g~~p~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~ 265 (288)
T 3kfa_A 194 DVWAFGVLLWEIATYGMSPYPGIDLSQVYE-LLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 265 (288)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCGGGHHH-HHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHHHH-HHh-ccCCCCCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHH
Confidence 99999999999996 565433332222 222 222233345667899999999999999999999999874
|
| >3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-37 Score=339.48 Aligned_cols=246 Identities=23% Similarity=0.382 Sum_probs=201.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. +++.||+|++...... .+.+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vaiK~~~~~~~~---~~~~~~e~~~l~~l~h~~i~~~~~~~~~-------- 74 (267)
T 3t9t_A 7 PSELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAMS---EEDFIEEAEVMMKLSHPKLVQLYGVCLE-------- 74 (267)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTTBC---HHHHHHHHHHHHTCCCTTBCCEEEEECS--------
T ss_pred hhheeeeeEecCCCceeEEEEEec-CCCeEEEEEccccCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcc--------
Confidence 368999999999999999999997 6889999999754332 3678999999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||++ ++|.+++... ..+++..++.++.||+.||+|||+
T Consensus 75 --------------------------------~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~ 122 (267)
T 3t9t_A 75 --------------------------------QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEE 122 (267)
T ss_dssp --------------------------------SSSCEEEECCCTTCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCeEEEEeCCCCCcHHHHHhhCcccCCHHHHHHHHHHHHHHHHHHHh
Confidence 235699999996 5999998765 468999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++....... .......||+.|+|||++.+ ..++.++|
T Consensus 123 ~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~D 187 (267)
T 3t9t_A 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWASPEVFSF-SRYSSKSD 187 (267)
T ss_dssp TTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHH--------------HSTTSTTCCGGGCCHHHHHH-CCCCHHHH
T ss_pred CCcccCCCchheEEECCCCCEEEcccccccccccccc--------------cccccccccccccChhhhcC-CCccchhc
Confidence 9999999999999999999999999999986532211 11233467889999999987 56899999
Q ss_pred hHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 592 MYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 592 IwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||+++|+|++ ||......+....... ...+......++++.++|.+||+.||.+|||+.+++++
T Consensus 188 i~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 258 (267)
T 3t9t_A 188 VWSFGVLMWEVFSEGKIPYENRSNSEVVEDIST--GFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQ 258 (267)
T ss_dssp HHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhc--CCcCCCCccCcHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 9999999999986 6765554444433332 22222233457799999999999999999999999975
|
| >3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-37 Score=356.23 Aligned_cols=252 Identities=23% Similarity=0.293 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++. |+.||||+++... .......+|+.+|++++||||+++++++.+..
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~--~~~vavK~~~~~~---~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~------ 91 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL--NEYVAVKIFPIQD---KQSWQNEYEVYSLPGMKHENILQFIGAEKRGT------ 91 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET--TEEEEEEEECGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC------
T ss_pred hhhchhhheecccCceEEEEEEEC--CCEEEEEEeecCc---hHHHHHHHHHHHHhcCCCCCchhhcceeccCC------
Confidence 468999999999999999999886 8999999996432 23445667999999999999999999985531
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.....+|+|||||+ ++|.+++.. ..+++..++.++.||+.||+|||++
T Consensus 92 ------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~qi~~al~~LH~~ 140 (322)
T 3soc_A 92 ------------------------------SVDVDLWLITAFHEKGSLSDFLKA-NVVSWNELCHIAETMARGLAYLHED 140 (322)
T ss_dssp ------------------------------SSSEEEEEEEECCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred ------------------------------CCCceEEEEEecCCCCCHHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 11346899999997 599999876 4599999999999999999999999
Q ss_pred ----------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC
Q 001059 513 ----------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG 582 (1170)
Q Consensus 513 ----------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~ 582 (1170)
||+||||||+|||++.++.+||+|||+|+....... .......+||+.|+|||++.+
T Consensus 141 ~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~ 207 (322)
T 3soc_A 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKS-------------AGDTHGQVGTRRYMAPEVLEG 207 (322)
T ss_dssp EEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSC-------------CCCCTTCCCCGGGCCHHHHTT
T ss_pred ccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccC-------------ccccccCccCccccCHhhccc
Confidence 999999999999999999999999999986532210 111234689999999999986
Q ss_pred C----CCCCccchhHHHHHHHHHhhc---CCCchh---------------HHHHHHHHhhhcCCCC---Cccc--cCCHH
Q 001059 583 W----PKIDEKADMYSLGIVFFELWH---PFSTAM---------------ERQIVLSDLKQKGELP---PSWV--AKFSE 635 (1170)
Q Consensus 583 ~----~~~~~ksDIwSlGviL~ELlt---Pf~~~~---------------~~~~~~~~l~~~~~~p---~~~~--~~~~e 635 (1170)
. ..++.++|||||||++|||++ ||.... ...............| ..+. ..+++
T Consensus 208 ~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (322)
T 3soc_A 208 AINFQRDAFLRIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAM 287 (322)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHH
T ss_pred ccccCcCCCccchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHH
Confidence 3 235568899999999999997 664321 1111222222222222 1111 12346
Q ss_pred HHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 636 QESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 636 ~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.+||.+||+.||.+|||+.++++.
T Consensus 288 l~~li~~cl~~dP~~Rps~~ell~~ 312 (322)
T 3soc_A 288 LCETIEECWDHDAEARLSAGCVGER 312 (322)
T ss_dssp HHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHccCChhhCcCHHHHHHH
Confidence 8999999999999999999999974
|
| >3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4e-37 Score=347.13 Aligned_cols=253 Identities=23% Similarity=0.379 Sum_probs=193.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh--ccCCCceeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--l~HpnIV~l~~~~~e~~~~~ 430 (1170)
..++|++.+.||+|+||+||+|++ +|+.||||++... ....+.+|.+++.. ++||||+++++++....
T Consensus 6 ~~~~y~~~~~lg~G~~g~V~~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~--- 75 (301)
T 3q4u_A 6 VARDITLLECVGKGRYGEVWRGSW--QGENVAVKIFSSR-----DEKSWFRETELYNTVMLRHENILGFIASDMTSR--- 75 (301)
T ss_dssp CGGGCEEEEEEEECSSEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEE---
T ss_pred ccCcEEEEEeeccCCCcEEEEEEE--CCEEEEEEEeccc-----cchhhHHHHHHHHHhhccCcCeeeEEEeecccc---
Confidence 457999999999999999999988 5999999998642 33456677777776 79999999999875431
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
.....+|+|||||+ ++|.+++.. ..+++..++.++.||+.||+||
T Consensus 76 ---------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~l 121 (301)
T 3q4u_A 76 ---------------------------------HSSTQLWLITHYHEMGSLYDYLQL-TTLDTVSCLRIVLSIASGLAHL 121 (301)
T ss_dssp ---------------------------------TTEEEEEEEECCCTTCBHHHHHTT-CCBCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEehhhccCCCHHHHHhh-cccCHHHHHHHHHHHHHHHHHH
Confidence 12457899999997 599999854 5699999999999999999999
Q ss_pred H--------hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 510 H--------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 510 H--------s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
| ++||+||||||+|||++.++.+||+|||+|+........ ........+||+.|+|||++.
T Consensus 122 H~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~ 190 (301)
T 3q4u_A 122 HIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQ-----------LDVGNNPRVGTKRYMAPEVLD 190 (301)
T ss_dssp HSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------EECCCCCCCCCGGGCCHHHHT
T ss_pred HHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccc-----------ccccccccccccceeChhhhc
Confidence 9 999999999999999999999999999999865432111 011123458999999999998
Q ss_pred CCC-----CCCccchhHHHHHHHHHhhc-------------CCCchh----HHHHHHHHhhhcCC---CCCcc--ccCCH
Q 001059 582 GWP-----KIDEKADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGE---LPPSW--VAKFS 634 (1170)
Q Consensus 582 ~~~-----~~~~ksDIwSlGviL~ELlt-------------Pf~~~~----~~~~~~~~l~~~~~---~p~~~--~~~~~ 634 (1170)
+.. .++.++|||||||++|||++ ||.... .............. +|..+ ...++
T Consensus 191 ~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (301)
T 3q4u_A 191 ETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLT 270 (301)
T ss_dssp TCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHH
T ss_pred CcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccccCCCCcchhhhhHHHhccCCCCCCChhhccCccHH
Confidence 742 24479999999999999985 343221 11222222222222 22211 12346
Q ss_pred HHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 635 EQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 635 e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.+||.+||+.||.+|||+.++++.
T Consensus 271 ~l~~li~~cl~~dP~~Rps~~~i~~~ 296 (301)
T 3q4u_A 271 SLAKLMKECWYQNPSARLTALRIKKT 296 (301)
T ss_dssp HHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 78999999999999999999999874
|
| >3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-37 Score=353.48 Aligned_cols=254 Identities=28% Similarity=0.446 Sum_probs=205.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||.||+|++ ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 21 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~-- 96 (327)
T 3lxl_A 21 EERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHS--GPDQQRDFQREIQILKALHSDFIVKYRGVSYGP-- 96 (327)
T ss_dssp CGGGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSC--CHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECS--
T ss_pred chhhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccC--CHHHHHHHHHHHHHHHhcCCCceeEEEEEEecC--
Confidence 357899999999999999999994 568999999998643 334556799999999999999999999987432
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL 506 (1170)
....+|+|||||+ ++|.+++.. ...+++..++.++.||+.||
T Consensus 97 ------------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al 140 (327)
T 3lxl_A 97 ------------------------------------GRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGM 140 (327)
T ss_dssp ------------------------------------SSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCceEEEEEeecCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHH
Confidence 2467899999995 699999976 45699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++...... ..........||+.|+|||++.+ ..+
T Consensus 141 ~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~------------~~~~~~~~~~~~~~y~aPE~~~~-~~~ 207 (327)
T 3lxl_A 141 EYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDK------------DYYVVREPGQSPIFWYAPESLSD-NIF 207 (327)
T ss_dssp HHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTC------------SEEECSSCCCSCGGGSCHHHHHH-CEE
T ss_pred HHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCC------------ccceeeccCCccccccCHHHhcc-CCC
Confidence 99999999999999999999999999999999998653221 01112234578999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHH--------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMER--------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~--------------~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
+.++|||||||++|+|++ ||...... ......+ .....++.....++++.+||.+||+.||.
T Consensus 208 ~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 286 (327)
T 3lxl_A 208 SRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLELL-EEGQRLPAPPACPAEVHELMKLCWAPSPQ 286 (327)
T ss_dssp EHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHHH-HTTCCCCCCTTCCHHHHHHHHHHTCSSGG
T ss_pred ChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHHh-hcccCCCCCCcccHHHHHHHHHHcCCChh
Confidence 999999999999999997 55433321 1111222 23333444556778999999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+|||+.+++++
T Consensus 287 ~Rps~~ell~~ 297 (327)
T 3lxl_A 287 DRPSFSALGPQ 297 (327)
T ss_dssp GSCCHHHHHHH
T ss_pred hCcCHHHHHHH
Confidence 99999999875
|
| >1hc7_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP + L-proline + tRNA(Pro) AMP + PPI + L-prolyl-tRNA(Pro); 2.43A {Thermus thermophilus} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1h4q_A* 1h4t_A 1h4s_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-37 Score=368.64 Aligned_cols=328 Identities=11% Similarity=0.029 Sum_probs=258.8
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC---CCcccccceEEEeccC----CceeeecCC
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GDLLELSHE 782 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~~laLRPD 782 (1170)
.++|+.||+|.++.+++.|++.+++.|+++||++|.||+| ++.. +.+.+.++||+|.|++ |+.++|||+
T Consensus 32 ~~~G~~d~lP~g~~l~~~I~~~~r~~~~~~G~~ei~tP~l~~~el~~~~sgh~d~f~~emy~~~d~g~~~l~~~l~LRP~ 111 (477)
T 1hc7_A 32 PVRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPT 111 (477)
T ss_dssp SSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------CCTTCEEEEEESSSEEEEEEEECSC
T ss_pred CCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHhhcCCcccccccceEEEECCCCccCCCeEEEcCC
Confidence 4799999999999999999999999999999999999999 3322 2456789999999987 899999999
Q ss_pred CCHHHHHHHHhC----CCCceeEEEecCeEEcC-CCCC--CCCceeEeEEEEeCCCCcccHHHHHHH---HHHHH-HHcC
Q 001059 783 LRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS--PPNRYLQGDFDIIGGASALTEAEVLKV---TMDIV-TRFF 851 (1170)
Q Consensus 783 ~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e-~~~~--~~~ef~Q~GvEiiG~~~~~aDaEvi~l---a~~~l-~~lg 851 (1170)
.|++++|+++.+ +..|+|+||+|+|||+| +|++ |.|||+|+|+|+||.....+|+|++.+ +.+++ +.||
T Consensus 112 ~~~~i~~~~~~~~~s~r~LP~rl~qig~vfR~E~~~rGl~R~REF~q~d~~~~~~~~~~ad~E~~~~l~~~~~i~~~~Lg 191 (477)
T 1hc7_A 112 SETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEVRRMLSIYARLAREYAA 191 (477)
T ss_dssp SHHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcHHHHHHHHhhhhccccCCeeeEeecCEEeCCCCCCCcceeEEEEEccEEEEeCCHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999988763 35699999999999998 4555 667899999999999999999998776 89999 8999
Q ss_pred CCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHH
Q 001059 852 HAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLR 931 (1170)
Q Consensus 852 i~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~ 931 (1170)
+. +.+.++++. ++.
T Consensus 192 l~--~~~~~~~~~--------------------------e~~-------------------------------------- 205 (477)
T 1hc7_A 192 IP--VIEGLKTEK--------------------------EKF-------------------------------------- 205 (477)
T ss_dssp CC--CEEEECCTT--------------------------TSC--------------------------------------
T ss_pred Ce--EEEEeCChH--------------------------Hhc--------------------------------------
Confidence 95 888887620 000
Q ss_pred hcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccc
Q 001059 932 FCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1011 (1170)
Q Consensus 932 ~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~G 1011 (1170)
.|.. ....+|.-+.-|..||+|++|++ +. +.+.+.|
T Consensus 206 -~g~~--------------------------------~~~~ie~~~~dgr~~~~gt~~~l---g~--------~~s~~~g 241 (477)
T 1hc7_A 206 -AGAV--------------------------------YTTTIEALMKDGKALQAGTSHYL---GE--------NFARAFD 241 (477)
T ss_dssp -TTSS--------------------------------EEEEEEEECTTSCEEEEEEEEEE---ET--------HHHHHTT
T ss_pred -CCcc--------------------------------cceEEEEEcCCCcEEEEeeeEEc---cc--------ccccccC
Confidence 0000 00011111111345799999986 21 2368899
Q ss_pred cccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcCCC----ccHHHH
Q 001059 1012 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGGG----GLLVER 1081 (1170)
Q Consensus 1012 GRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~~~----~~~~~a 1081 (1170)
+||++. -| ....++++||++| +||+.+|.+ +...+...+|.+|+|++++.+ ....+|
T Consensus 242 ~~y~~~---~G---------~~~~~~~~~~Gig-eRli~~lie~~~d~~gl~~P~~laP~qV~Iipi~~~~~~~~~~~~a 308 (477)
T 1hc7_A 242 IKFQDR---DL---------QVKYVHTTSWGLS-WRFIGAIIMTHGDDRGLVLPPRLAPIQVVIVPIYKDESRERVLEAA 308 (477)
T ss_dssp CEEECT---TS---------CEEECEEEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCSEEEEECCCTTTHHHHHHHH
T ss_pred eEEECC---CC---------CEEeeeEeeccHH-HHHHHHHHHHhCccccccCCcccCCceEEEEEcCCcchHHHHHHHH
Confidence 999864 12 2223578999999 999988741 222333347889999998622 468899
Q ss_pred HHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1082 MELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1082 ~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
.++++.||+.|++|++++..++++++++++|++.|+|++|+||++|+++|+|+||+++ ++|..|+++++++.|.+.++.
T Consensus 309 ~~l~~~Lr~~Gi~v~~D~~~~~s~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~-~eq~~v~~~el~~~l~~~l~~ 387 (477)
T 1hc7_A 309 QGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQAVLASRL-GGKETLPLAALPEALPGKLDA 387 (477)
T ss_dssp HHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETT-SCCCEEEGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEEEeCCCCCCHHHHHHHHhhcCCCEEEEECcchhcCCEEEEEEec-CceEEEeHHHHHHHHHHHHHH
Confidence 9999999999999998765357899999999999999999999999999999999999 999999999999999888776
Q ss_pred hccC
Q 001059 1162 QFRN 1165 (1170)
Q Consensus 1162 ~~~~ 1165 (1170)
.+++
T Consensus 388 ~~~~ 391 (477)
T 1hc7_A 388 FHEE 391 (477)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5543
|
| >3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-37 Score=350.09 Aligned_cols=256 Identities=20% Similarity=0.253 Sum_probs=196.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEcc---CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKL---DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~---tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|.+.+.||+|+||+||+|.+.. ++..||||+++.........+.+.+|+.++++++||||+++++++.+...
T Consensus 33 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~-- 110 (313)
T 3brb_A 33 RNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSS-- 110 (313)
T ss_dssp GGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-----
T ss_pred HHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccc--
Confidence 4689999999999999999999875 45689999998766666666789999999999999999999998854310
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHH------hcCCCCHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE------SYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~------~~~~l~e~~~~~i~~qI~ 503 (1170)
......|++|||++ ++|.+++. ....+++..++.++.||+
T Consensus 111 ---------------------------------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~ 157 (313)
T 3brb_A 111 ---------------------------------QGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIA 157 (313)
T ss_dssp -------------------------------------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHH
T ss_pred ---------------------------------cCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHH
Confidence 11235799999997 59999884 234699999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
.||.|||++||+||||||+|||++.++.+||+|||+++....... ........+++.|+|||++.+
T Consensus 158 ~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~~y~aPE~~~~- 223 (313)
T 3brb_A 158 LGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDY-------------YRQGRIAKMPVKWIAIESLAD- 223 (313)
T ss_dssp HHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC-----------------------------CCGGGSCHHHHHS-
T ss_pred HHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccc-------------cCcccccCCCccccCchhhcC-
Confidence 999999999999999999999999999999999999986532211 011233467889999999987
Q ss_pred CCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 584 PKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
..++.++|||||||++|+|++ ||............. ....+......++++.++|.+||+.||.+|||+.++++
T Consensus 224 ~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~ 301 (313)
T 3brb_A 224 RVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLL--HGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRL 301 (313)
T ss_dssp SCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHH--TTCCCCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred CCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHH--cCCCCCCCccccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence 568999999999999999997 665544433333322 23334444567789999999999999999999999997
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
+
T Consensus 302 ~ 302 (313)
T 3brb_A 302 Q 302 (313)
T ss_dssp H
T ss_pred H
Confidence 6
|
| >2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-37 Score=353.41 Aligned_cols=251 Identities=22% Similarity=0.317 Sum_probs=202.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc-----EEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR-----HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~-----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|.+..+++ .||+|+++... .....+.+.+|+.+++.+ +||||++++++|..
T Consensus 45 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~-- 121 (333)
T 2i1m_A 45 RNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTA-HADEKEALMSELKIMSHLGQHENIVNLLGACTH-- 121 (333)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred HHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhccccc-ChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec--
Confidence 4789999999999999999999987664 79999987443 334567799999999999 89999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc--------------CCCCH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY--------------DHFDK 492 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~--------------~~l~e 492 (1170)
...+|+|||||++ +|.+++... ..+++
T Consensus 122 --------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (333)
T 2i1m_A 122 --------------------------------------GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAST 163 (333)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCH
T ss_pred --------------------------------------CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCH
Confidence 2356999999975 999988643 35899
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCc
Q 001059 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572 (1170)
Q Consensus 493 ~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 572 (1170)
..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... ........||+
T Consensus 164 ~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~~~~ 230 (333)
T 2i1m_A 164 RDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSN-------------YIVKGNARLPV 230 (333)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTT-------------SEECSSCEECG
T ss_pred HHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccc-------------eeecCCCCCCc
Confidence 99999999999999999999999999999999999999999999999986532210 01123456889
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 648 (1170)
.|+|||++.+ ..++.++|||||||++|||++ ||............... ...+......++++.++|.+||+.||
T Consensus 231 ~y~aPE~~~~-~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p 308 (333)
T 2i1m_A 231 KWMAPESIFD-CVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLVKD-GYQMAQPAFAPKNIYSIMQACWALEP 308 (333)
T ss_dssp GGSCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHHHH-TCCCCCCTTCCHHHHHHHHHHTCSSG
T ss_pred cccCHHHhcc-CCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHHhc-CCCCCCCCCCCHHHHHHHHHHhccCh
Confidence 9999999987 568999999999999999996 77654433333333332 22222334456799999999999999
Q ss_pred CCCCCHHHHHhc
Q 001059 649 SDRPSATELLQD 660 (1170)
Q Consensus 649 ~~RPta~eiL~~ 660 (1170)
.+|||+.+++++
T Consensus 309 ~~Rps~~~l~~~ 320 (333)
T 2i1m_A 309 THRPTFQQICSF 320 (333)
T ss_dssp GGSCCHHHHHHH
T ss_pred hhCcCHHHHHHH
Confidence 999999999975
|
| >1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.6e-37 Score=350.80 Aligned_cols=249 Identities=23% Similarity=0.342 Sum_probs=200.0
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEE--EEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHY--AVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~v--AVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
...++|++.+.||+|+||.||+|+++.+|..+ |+|.++.. ........+.+|+.+|+++ +||||+++++++.+
T Consensus 22 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~--- 97 (327)
T 1fvr_A 22 LDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH--- 97 (327)
T ss_dssp CCGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEE---
T ss_pred ccHHHccceeeeecCCCceEEEEEEccCCcccceeeeeeccc-cchHHHHHHHHHHHHHHhccCCCchhhhceeeee---
Confidence 34589999999999999999999999888865 99988743 2233456789999999999 99999999998743
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------CCC
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----------------HFD 491 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----------------~l~ 491 (1170)
...+|+|||||+ ++|.+++.... .++
T Consensus 98 -------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 140 (327)
T 1fvr_A 98 -------------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLS 140 (327)
T ss_dssp -------------------------------------TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSC
T ss_pred -------------------------------------CCceEEEEecCCCCCHHHHHHhcccccccccccccccccccCC
Confidence 357899999996 59999997654 699
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... .......+|
T Consensus 141 ~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~~~~~~~~----------------~~~~~~~~~ 204 (327)
T 1fvr_A 141 SQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVY----------------VKKTMGRLP 204 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEE----------------CCC----CC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCcCcccccc----------------ccccCCCCC
Confidence 9999999999999999999999999999999999999999999999999743211 112334678
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
+.|+|||++.+ ..++.++|||||||++|||++ ||......+...... .+..+......++++.+||.+||+.|
T Consensus 205 ~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~d 281 (327)
T 1fvr_A 205 VRWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP--QGYRLEKPLNCDDEVYDLMRQCWREK 281 (327)
T ss_dssp TTTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGG--GTCCCCCCTTBCHHHHHHHHHHTCSS
T ss_pred ccccChhhhcc-ccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhh--cCCCCCCCCCCCHHHHHHHHHHccCC
Confidence 99999999987 568999999999999999996 776655444433332 22223333456789999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|.+|||+.+++++
T Consensus 282 p~~Rps~~ell~~ 294 (327)
T 1fvr_A 282 PYERPSFAQILVS 294 (327)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhhCcCHHHHHHH
Confidence 9999999999986
|
| >3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-37 Score=344.49 Aligned_cols=253 Identities=20% Similarity=0.222 Sum_probs=199.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
-.|++.+.||+|+||+||+|.+..+++ .||+|++... ......+.+.+|+.+++.++||||++++++|.+.
T Consensus 21 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 94 (298)
T 3pls_A 21 VVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRI-TEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP----- 94 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTC-CSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-----
T ss_pred eEEccCceeccCCCceEEEEEEecCCCceeeeeeeecccc-ccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecC-----
Confidence 356778999999999999999876554 7999998642 3344567889999999999999999999987432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....+++|||+. ++|.+++.. ...+++..++.++.||+.||+||
T Consensus 95 ----------------------------------~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~L 140 (298)
T 3pls_A 95 ----------------------------------EGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGMEYL 140 (298)
T ss_dssp ----------------------------------SSCCEEEECCCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEecccCCCHHHHHhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 223489999985 699999876 45689999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++......... ........+|+.|+|||++.+ ..++.+
T Consensus 141 H~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 208 (298)
T 3pls_A 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYS-----------VQQHRHARLPVKWTALESLQT-YRFTTK 208 (298)
T ss_dssp HHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGC-----------SCCSSCTTCGGGGSCHHHHTT-CCCCHH
T ss_pred HhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccc-----------cccCcCCCCCccccChhhhcc-CCCChh
Confidence 99999999999999999999999999999998654322111 011234578999999999987 568999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|+|++ |+............+. ....++.....++.+.++|.+||+.||.+|||+.++++.
T Consensus 209 ~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~ 281 (298)
T 3pls_A 209 SDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLA-QGRRLPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGE 281 (298)
T ss_dssp HHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhh-cCCCCCCCccchHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 999999999999997 4333222222222222 222333344567899999999999999999999999974
|
| >4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=344.37 Aligned_cols=256 Identities=23% Similarity=0.240 Sum_probs=197.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|++..+|+.||||++...... ..+.+|+.+++.++|++++..+..+..
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~----~~~~~e~~~l~~l~~~~~i~~~~~~~~------- 75 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA------- 75 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC---C----CCHHHHHHHHHHHTTSTTCCCEEEEEE-------
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeecccccc----hHHHHHHHHHHHhcCCCCCCeeeeecC-------
Confidence 347899999999999999999999999999999987654332 347889999999999998887766533
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.....|++||||+++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 76 --------------------------------~~~~~~lv~e~~~~~L~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~ 123 (296)
T 4hgt_A 76 --------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHS 123 (296)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCceEEEEEccCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457799999998899999874 4579999999999999999999999
Q ss_pred CCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 512 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
+||+||||||+|||+ +.++.+||+|||+++............ ........||+.|+|||++.+ ..++.
T Consensus 124 ~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~--------~~~~~~~~gt~~y~aPE~~~~-~~~~~ 194 (296)
T 4hgt_A 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIP--------YRENKNLTGTARYASINTHLG-IEQSR 194 (296)
T ss_dssp TTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCC--------CCCSCCCCSCGGGCCHHHHTT-CCCCH
T ss_pred CCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCC--------CCcccccCCCccccchHHhcC-CCCCc
Confidence 999999999999999 788999999999998764332111000 012245689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHH---HHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMER---QIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~---~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|+|++ ||...... ......... ....+......++++.+||.+||+.||.+|||+.++++.
T Consensus 195 ~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~ 274 (296)
T 4hgt_A 195 RDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQL 274 (296)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHH
Confidence 9999999999999996 77643211 111111111 111111224457799999999999999999999999863
|
| >2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.9e-37 Score=354.65 Aligned_cols=267 Identities=13% Similarity=0.246 Sum_probs=199.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC--------CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD--------GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t--------g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e 425 (1170)
.++|++.+.||+|+||.||+|++..+ ++.||||++... ..+.+|+.+++.++||||+++++.+..
T Consensus 41 ~~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-------~~~~~E~~~l~~l~h~niv~~~~~~~~ 113 (352)
T 2jii_A 41 GRQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-------GRLFNEQNFFQRAAKPLQVNKWKKLYS 113 (352)
T ss_dssp SCEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT-------STHHHHHHHHHHHCCHHHHHHHHHHTT
T ss_pred CCeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-------chHHHHHHHHHHhcccchhhhhhhhcc
Confidence 37899999999999999999999874 889999998743 357899999999999999986544311
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhc--CCCCHHHHHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESY--DHFDKELAWHLFRQIV 503 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~--~~l~e~~~~~i~~qI~ 503 (1170)
.... +. ..+.+.. ......+|+|||||+++|.+++... ..+++..++.++.||+
T Consensus 114 ~~~~----------~i-------------~~~~~~~-~~~~~~~~lv~e~~~~~L~~~l~~~~~~~l~~~~~~~i~~qi~ 169 (352)
T 2jii_A 114 TPLL----------AI-------------PTCMGFG-VHQDKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLL 169 (352)
T ss_dssp CTTC----------SC-------------CCCCEEE-EETTTEEEEEEECCCEEHHHHHHHSGGGCCCHHHHHHHHHHHH
T ss_pred CCcc----------Cc-------------cchhhcc-ccCCcEEEEEecCCCcCHHHHHHhCCcCCCCHHHHHHHHHHHH
Confidence 1000 00 0000000 0124678999999977999999876 7799999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCC--CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARN--DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~--~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
.||+|||++||+||||||+|||++.++ .+||+|||+++.+......... .........||+.|+|||++.
T Consensus 170 ~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~--------~~~~~~~~~gt~~y~aPE~~~ 241 (352)
T 2jii_A 170 DALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAY--------VEGSRSPHEGDLEFISMDLHK 241 (352)
T ss_dssp HHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCC--------CTTSSCTTCSCTTTCCHHHHT
T ss_pred HHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccc--------cccccccccCCccccCHHHHc
Confidence 999999999999999999999999988 8999999999876433211000 011124458999999999998
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchh-HHHHHHHHh---hhcC-CCC---CccccCCHHHHHHHHHccCCCCCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAM-ERQIVLSDL---KQKG-ELP---PSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~-~~~~~~~~l---~~~~-~~p---~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
+ ..++.++|||||||++|||++ ||.... ......... .... .++ ..+...++++.+||.+||+.||.+
T Consensus 242 ~-~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 320 (352)
T 2jii_A 242 G-CGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEE 320 (352)
T ss_dssp T-CCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTC
T ss_pred c-CCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhh
Confidence 8 568999999999999999997 777653 222211111 1111 111 122355789999999999999999
Q ss_pred CCCHHHHHhc
Q 001059 651 RPSATELLQD 660 (1170)
Q Consensus 651 RPta~eiL~~ 660 (1170)
|||+.++++.
T Consensus 321 Rps~~~l~~~ 330 (352)
T 2jii_A 321 KPPYAMLRNN 330 (352)
T ss_dssp CCCHHHHHHH
T ss_pred CCCHHHHHHH
Confidence 9999999864
|
| >1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-36 Score=349.54 Aligned_cols=253 Identities=20% Similarity=0.278 Sum_probs=197.6
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
...++|++.+.||+|+||+||+|.++.++ ..||||+++.. ........+.+|+.+++.++||||+++++++..
T Consensus 41 i~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 117 (333)
T 1mqb_A 41 IHPSCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK-- 117 (333)
T ss_dssp CCTTTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS--
T ss_pred CChHHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEec--
Confidence 34578999999999999999999987553 45999999743 334455678999999999999999999998732
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+|||||++ +|.+++... ..+++..++.++.||+.|
T Consensus 118 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~a 159 (333)
T 1mqb_A 118 --------------------------------------YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAG 159 (333)
T ss_dssp --------------------------------------SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 3467999999975 999998764 569999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..
T Consensus 160 L~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~ 226 (333)
T 1mqb_A 160 MKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE------------ATYTTSGGKIPIRWTAPEAISY-RK 226 (333)
T ss_dssp HHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------------------CCCGGGSCHHHHHS-CC
T ss_pred HHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccc------------cccccCCCCccccccCchhccc-CC
Confidence 9999999999999999999999999999999999987542210 0011223457889999999987 56
Q ss_pred CCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 586 IDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++.++|||||||++|||++ ||......+...... .+..++.....++++.++|.+||+.||.+||++.+++++
T Consensus 227 ~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 303 (333)
T 1mqb_A 227 FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN--DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 303 (333)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH--TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred CCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH--CCCcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 8999999999999999986 776655544433332 222333344667899999999999999999999999875
|
| >3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-37 Score=351.05 Aligned_cols=264 Identities=25% Similarity=0.393 Sum_probs=185.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.+|++.+.||+|+||.||+|++..+|+.||||++... .......+.+|+.+++++. ||||+++++++.....
T Consensus 28 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~----- 100 (337)
T 3ll6_A 28 LRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSN--EEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKE----- 100 (337)
T ss_dssp EEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTT-----
T ss_pred ceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCC--chHHHHHHHHHHHHHHHhccCCChhhcccccccccc-----
Confidence 4799999999999999999999999999999998643 3345567899999999996 9999999998853210
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES---YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~---~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
........+|++||||+|+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 101 ---------------------------~~~~~~~~~~lv~e~~~g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH 153 (337)
T 3ll6_A 101 ---------------------------ESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153 (337)
T ss_dssp ---------------------------TSTTSSEEEEEEEECCSEEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------ccccCCceEEEEEEecCCCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 01123567899999999999998864 456999999999999999999999
Q ss_pred hCC--ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc--CCCCC
Q 001059 511 GQG--IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ--GWPKI 586 (1170)
Q Consensus 511 s~g--IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~--~~~~~ 586 (1170)
++| |+||||||+|||++.++.+||+|||+++.......... ...............||+.|+|||++. ....+
T Consensus 154 ~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~ 230 (337)
T 3ll6_A 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSW---SAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPI 230 (337)
T ss_dssp TSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC----------------------------------CCTTSCS
T ss_pred hCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccc---cccccccchhhccccCCCCcCChhhhhccccCCC
Confidence 999 99999999999999999999999999987543211000 000000011123457999999999984 22458
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|+|++ ||......... ......+ .....++.+.+||++||+.||.+|||+.+++++
T Consensus 231 ~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 302 (337)
T 3ll6_A 231 GEKQDIWALGCILYLLCFRQHPFEDGAKLRIV----NGKYSIP-PHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQ 302 (337)
T ss_dssp SHHHHHHHHHHHHHHHHHSSCCC----------------CCCC-TTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred ChHHhHHHHHHHHHHHHhCCCCCcchhHHHhh----cCcccCC-cccccchHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 899999999999999997 77544332222 1112222 223445678999999999999999999999987
|
| >2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.3e-37 Score=351.65 Aligned_cols=250 Identities=22% Similarity=0.346 Sum_probs=201.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEc-------cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNK-------LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~-------~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
.++|++.+.||+|+||+||+|++. .++..||||+++.. ........+.+|+.+++.+ +||||++++++|..
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 34 RDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDD-ATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccC-CcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 478999999999999999999986 45788999998743 3444567799999999999 99999999998732
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----------------
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---------------- 488 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---------------- 488 (1170)
...+|+|||||+ ++|.+++....
T Consensus 113 ----------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~ 152 (334)
T 2pvf_A 113 ----------------------------------------DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE 152 (334)
T ss_dssp ----------------------------------------SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------
T ss_pred ----------------------------------------CCceEEEEECCCCCcHHHHHHHhccccccccccccccccc
Confidence 345799999997 59999997653
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....... .......
T Consensus 153 ~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~-------------~~~~~~~ 219 (334)
T 2pvf_A 153 QMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDY-------------YKKTTNG 219 (334)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSS-------------EECCSCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEcccccccccccccc-------------ccccCCC
Confidence 389999999999999999999999999999999999999999999999999986532210 1112344
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.+|+.|+|||++.+ ..++.++|||||||++|||++ ||......+..... . ....++.....++++.++|.+||
T Consensus 220 ~~~~~y~aPE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~li~~~l 296 (334)
T 2pvf_A 220 RLPVKWMAPEALFD-RVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL-K-EGHRMDKPANCTNELYMMMRDCW 296 (334)
T ss_dssp CCCGGGCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHH-H-HTCCCCCCTTCCHHHHHHHHHHT
T ss_pred CcccceeChHHhcC-CCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHH-h-cCCCCCCCccCCHHHHHHHHHHc
Confidence 67899999999987 568999999999999999986 67655444433222 2 22233334466789999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.||.+|||+.+++++
T Consensus 297 ~~dp~~Rps~~ell~~ 312 (334)
T 2pvf_A 297 HAVPSQRPTFKQLVED 312 (334)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred cCChhhCcCHHHHHHH
Confidence 9999999999999975
|
| >2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=352.04 Aligned_cols=253 Identities=22% Similarity=0.288 Sum_probs=198.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEE-----EccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCK-----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETG 427 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~-----~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~ 427 (1170)
..++|++.+.||+|+||.||+|+ +..++..||||++... .......++.+|+.++++++||||+++++++.+
T Consensus 28 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~-- 104 (327)
T 2yfx_A 28 PRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEV-CSEQDELDFLMEALIISKFNHQNIVRCIGVSLQ-- 104 (327)
T ss_dssp CGGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS--
T ss_pred ChhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccc-cchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcC--
Confidence 35789999999999999999999 5567889999998633 344456689999999999999999999998733
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-------CCCHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------HFDKELAWHLF 499 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------~l~e~~~~~i~ 499 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++
T Consensus 105 --------------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~ 146 (327)
T 2yfx_A 105 --------------------------------------SLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146 (327)
T ss_dssp --------------------------------------SSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHH
T ss_pred --------------------------------------CCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHH
Confidence 234689999995 59999997653 48999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
.||+.||.|||++||+||||||+|||++. +..+||+|||+++........ .......||+.|+|
T Consensus 147 ~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~-------------~~~~~~~~~~~y~a 213 (327)
T 2yfx_A 147 RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYY-------------RKGGCAMLPVKWMP 213 (327)
T ss_dssp HHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC-------------------CCGGGSCGGGCC
T ss_pred HHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccccccccc-------------ccCCCcCCCcceeC
Confidence 99999999999999999999999999984 446999999999865322110 11234578999999
Q ss_pred cccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 001059 577 PEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 577 PE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
||++.+ ..++.++|||||||++|+|++ ||......+...... ....+......++.+.++|.+||+.||.+||
T Consensus 214 PE~~~~-~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rp 290 (327)
T 2yfx_A 214 PEAFME-GIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVT--SGGRMDPPKNCPGPVYRIMTQCWQHQPEDRP 290 (327)
T ss_dssp HHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HhHhcC-CCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHh--cCCCCCCCCCCCHHHHHHHHHHhcCChhhCc
Confidence 999987 568999999999999999996 666554444333322 2223333445678999999999999999999
Q ss_pred CHHHHHhccC
Q 001059 653 SATELLQDAL 662 (1170)
Q Consensus 653 ta~eiL~~~~ 662 (1170)
|+.+++++.+
T Consensus 291 s~~~ll~~l~ 300 (327)
T 2yfx_A 291 NFAIILERIE 300 (327)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 9999999853
|
| >3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-37 Score=344.13 Aligned_cols=248 Identities=23% Similarity=0.314 Sum_probs=197.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||+||+|++..+ +..||+|+++.. ......+.+.+|+.+++.++||||+++++++.+
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~----- 84 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKD-CTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE----- 84 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTT-SCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-----
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccc-cCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-----
Confidence 47899999999999999999997643 446999998743 334456789999999999999999999988621
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
...|++|||++ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 85 ------------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~ 128 (281)
T 3cc6_A 85 ------------------------------------EPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQICKAMAY 128 (281)
T ss_dssp ------------------------------------SSCEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCEEEEecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHH
Confidence 23489999997 59999987654 59999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||++........ .......+|+.|+|||++.+ ..++.
T Consensus 129 lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~ 193 (281)
T 3cc6_A 129 LESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDY--------------YKASVTRLPIKWMSPESINF-RRFTT 193 (281)
T ss_dssp HHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-----------------------CCCCCGGGCCHHHHHH-CCCCH
T ss_pred HHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccc--------------cccccCCCCcceeCchhhcc-CCCCc
Confidence 9999999999999999999999999999999986532211 11233467889999999987 56899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|+|++ ||........... +. ....++.....++.+.++|.+||+.||.+|||+.+++++
T Consensus 194 ~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 267 (281)
T 3cc6_A 194 ASDVWMFAVCMWEILSFGKQPFFWLENKDVIGV-LE-KGDRLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCS 267 (281)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHH-HH-HTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhccHHHHHHHHHHHhCCCCCcccCChHHHHHH-Hh-cCCCCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence 9999999999999986 6654333322222 22 222233334567899999999999999999999999976
|
| >2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-37 Score=348.67 Aligned_cols=262 Identities=25% Similarity=0.350 Sum_probs=200.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.++.+|+.||||++... .....+.+.+|+.+++.++||||+++++++....
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~------ 99 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCH--EQQDREEAQREADMHRLFNHPNILRLVAYCLRER------ 99 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEES--SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEE------
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecC--CHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEecc------
Confidence 36799999999999999999999999999999998653 3345678899999999999999999999885320
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....+|+|||||++ +|.+++.. ...+++..++.++.||+.||+|
T Consensus 100 ------------------------------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~ 149 (317)
T 2buj_A 100 ------------------------------GAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEA 149 (317)
T ss_dssp ------------------------------TTEEEEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCCceeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 124578999999975 99998875 4569999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC--CC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KI 586 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~--~~ 586 (1170)
||++||+||||||+|||++.++.+||+|||++............. ..........||+.|+|||++.+.. .+
T Consensus 150 LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 223 (317)
T 2buj_A 150 IHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQA------LTLQDWAAQRCTISYRAPELFSVQSHCVI 223 (317)
T ss_dssp HHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHH------HHHHHHHHHHSCGGGCCGGGSSCCSEEEE
T ss_pred HHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccccccc------ccccccccccCCcccCCHhHhccCCCcCC
Confidence 999999999999999999999999999999987543211000000 0000112346899999999987632 26
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHH-HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~-~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|+|++ ||....... ....... .....+.....++++.++|.+||+.||.+|||+.+++++
T Consensus 224 ~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 300 (317)
T 2buj_A 224 DERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALAVQ-NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ 300 (317)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHHHH-CC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHHhh-ccCCCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence 889999999999999997 664322111 1111111 222223345567899999999999999999999999986
|
| >3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=7.1e-37 Score=345.16 Aligned_cols=252 Identities=21% Similarity=0.252 Sum_probs=197.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..|++.+.||+|+||+||+|.+..++ ..||+|.+.. .......+.+.+|+.++++++||||++++++|.+.
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~-~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----- 98 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----- 98 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETT-CCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCS-----
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEeccc-CCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcC-----
Confidence 57999999999999999999976433 3689998864 23444567899999999999999999999886432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++||||++ +|.+++.. ...+++..++.++.||+.||+||
T Consensus 99 ----------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~ql~~~l~~l 144 (298)
T 3f66_A 99 ----------------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYL 144 (298)
T ss_dssp ----------------------------------SSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 3456899999975 99999975 34589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++......... ........||+.|+|||++.+ ..++.+
T Consensus 145 H~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 212 (298)
T 3f66_A 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYS-----------VHNKTGAKLPVKWMALESLQT-QKFTTK 212 (298)
T ss_dssp HHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCB-----------C-----CCBCGGGSCHHHHHH-CCCCHH
T ss_pred HhCCccCCCCchheEEECCCCCEEECcccccccccccchhc-----------cccccCCCCCccccChHHhcC-CCCChH
Confidence 99999999999999999999999999999998654322110 112244578899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|+|++ ||.............. ...+......++.+.++|.+||+.||.+|||+.++++.
T Consensus 213 ~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~ 285 (298)
T 3f66_A 213 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQ--GRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 285 (298)
T ss_dssp HHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhc--CCCCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999997 5544443333333332 22222234456789999999999999999999999974
|
| >3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-37 Score=352.83 Aligned_cols=250 Identities=24% Similarity=0.360 Sum_probs=194.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEE----EEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHY----AVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~v----AVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++++.||+|+||+||+|++..+|+.+ |+|.+... ........+.+|+.+++.++||||++++++|..
T Consensus 13 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~--- 88 (327)
T 3lzb_A 13 KETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT--- 88 (327)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCC-SSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEES---
T ss_pred CHhHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccc-cCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEec---
Confidence 3578999999999999999999998888765 66666432 233446789999999999999999999998742
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL 506 (1170)
...+++|+|+. ++|.+++.. ...+++..++.++.||+.||
T Consensus 89 --------------------------------------~~~~~v~~~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL 130 (327)
T 3lzb_A 89 --------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGM 130 (327)
T ss_dssp --------------------------------------SSEEEEECCCSSCBHHHHHHHTTTCCCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCceEEEEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHH
Confidence 12578888886 699998876 45699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..+
T Consensus 131 ~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~-------------~~~~~~~~~t~~y~aPE~~~~-~~~ 196 (327)
T 3lzb_A 131 NYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIY 196 (327)
T ss_dssp HHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----------------------------CCCGGGSCHHHHHH-CCC
T ss_pred HHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccc-------------cccccCCCccccccCHHHHcC-CCC
Confidence 999999999999999999999999999999999987542211 111233467889999999987 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++|||||||++|||++ ||......+.... +. ....++.....++++.+||++||+.||.+|||+.++++.
T Consensus 197 ~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~ 272 (327)
T 3lzb_A 197 THQSDVWSYGVTVWELMTFGSKPYDGIPASEISSI-LE-KGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIE 272 (327)
T ss_dssp CHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHH-HH-TTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH-HH-cCCCCCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999999986 6765444333222 22 233333445567899999999999999999999999974
|
| >1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=342.33 Aligned_cols=249 Identities=20% Similarity=0.261 Sum_probs=201.8
Q ss_pred CCceEEe-eeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQ-PLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~-~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|.+.+ .||+|+||.||+|.++ .++..||||+++.. ......+.+.+|+.+++.++||||+++++++.
T Consensus 9 ~~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~------- 80 (287)
T 1u59_A 9 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ------- 80 (287)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEE-------
T ss_pred HHhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCc-cchhHHHHHHHHHHHHHhCCCCCEeEEEEEec-------
Confidence 5677777 9999999999999864 46888999999754 33445678999999999999999999998872
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||++ +|.+++... ..+++..++.++.||+.||.||
T Consensus 81 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~l 126 (287)
T 1u59_A 81 ----------------------------------AEALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 126 (287)
T ss_dssp ----------------------------------SSSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCcEEEEEeCCCCCHHHHHHhCCccCCHHHHHHHHHHHHHHHHHH
Confidence 1347999999975 999988644 4699999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++........ ........||+.|+|||++.+ ..++.+
T Consensus 127 H~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 193 (287)
T 1u59_A 127 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 193 (287)
T ss_dssp HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE------------ECCCCSSCCCGGGCCHHHHHH-CEECHH
T ss_pred HHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcce------------eeccccccccccccCHHHhcc-CCCCch
Confidence 9999999999999999999999999999999865322110 111233467899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||......+...... .+..++.....++++.++|.+||+.||.+||++.+++++
T Consensus 194 ~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 266 (287)
T 1u59_A 194 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 266 (287)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHh--cCCcCCCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999996 776555444333322 233334445677899999999999999999999999986
|
| >1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-37 Score=374.15 Aligned_cols=247 Identities=22% Similarity=0.300 Sum_probs=203.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.++.++..||||+++.... ..+.+.+|+.+|++++||||++++++|..
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~hpniv~l~~~~~~-------- 287 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 287 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc---chHHHHHHHHHHHhcCCCCEeeEEEEEec--------
Confidence 4689999999999999999999998899999999875432 35679999999999999999999998832
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 288 --------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH 335 (495)
T 1opk_A 288 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 335 (495)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345699999997 6999999764 45899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++...... ........+|+.|+|||++.+ ..++.++
T Consensus 336 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--------------~~~~~~~~~~~~y~aPE~~~~-~~~~~~s 400 (495)
T 1opk_A 336 KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 400 (495)
T ss_dssp HTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCC--------------EECCTTCCCCGGGCCHHHHHH-CEECHHH
T ss_pred hCCcccCCCChhhEEECCCCcEEEeecccceeccCCc--------------eeecCCCcCCcceeCHhHHhc-CCCCcHH
Confidence 9999999999999999999999999999998653211 111233467889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||+||||++ ||......+.. ..+. ....++....+++++.+||.+||+.||.+|||+.++++.
T Consensus 401 DvwSlG~~l~el~t~g~~p~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~ 472 (495)
T 1opk_A 401 DVWAFGVLLWEIATYGMSPYPGIDLSQVY-ELLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQA 472 (495)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCGGGHH-HHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHhHHHHHHHHHhCCCCCCCCCCHHHHH-HHHH-cCCCCCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence 99999999999996 66554433332 2222 222333345667899999999999999999999999864
|
| >1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-36 Score=339.88 Aligned_cols=245 Identities=27% Similarity=0.356 Sum_probs=199.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||.||+|.+. ++..||||+++.... ..+.+.+|+.+|+.++||||+++++++.
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~--------- 78 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVT--------- 78 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEEC---------
T ss_pred HHhhhheeeecCCCCeEEEEEEEc-CCcEEEEEEecCCcc---cHHHHHHHHHHHHhCCCcCcceEEEEEc---------
Confidence 368999999999999999999986 677899999975433 2467899999999999999999998762
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++|||++ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 79 --------------------------------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH 126 (279)
T 1qpc_A 79 --------------------------------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIE 126 (279)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 123689999996 69999987543 6999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++
T Consensus 127 ~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~~ 191 (279)
T 1qpc_A 127 ERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEY--------------TAREGAKFPIKWTAPEAINY-GTFTIKS 191 (279)
T ss_dssp HTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCE--------------ECCTTCCCCTTTSCHHHHHH-CEECHHH
T ss_pred HCCeeccCCCHhhEEEcCCCCEEECCCcccccccCccc--------------ccccCCCCccCccChhhhcc-CCCCchh
Confidence 99999999999999999999999999999986532210 11233467889999999986 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+....... ...+......++++.++|.+||+.||.+|||+.++++.
T Consensus 192 Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 263 (279)
T 1qpc_A 192 DVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLER--GYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSV 263 (279)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhc--ccCCCCcccccHHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 99999999999996 7765554444333322 22223334567899999999999999999999999863
|
| >1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-37 Score=342.01 Aligned_cols=241 Identities=24% Similarity=0.386 Sum_probs=192.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. |+.||||+++... ..+.+.+|+.+++.++||||+++++++.+.
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~~----~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~------- 86 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 86 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC-------
T ss_pred hhhceEEeEEecCCCceEEEEEEc--CCEEEEEEecchh----HHHHHHHHHHHHHhCCCCCEeeEEEEEEcC-------
Confidence 578999999999999999999885 8999999986432 346789999999999999999999987432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~--l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+||||+++ +|.+++..... +++..++.++.||+.||+|||
T Consensus 87 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH 134 (278)
T 1byg_A 87 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 134 (278)
T ss_dssp ----------------------------------CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH
Confidence 2357999999975 99999876543 899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||++...... .....+|+.|+|||++.+ ..++.++
T Consensus 135 ~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~------------------~~~~~~~~~y~aPE~~~~-~~~~~~~ 195 (278)
T 1byg_A 135 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 195 (278)
T ss_dssp HTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCTTTSCHHHHHH-CCCCHHH
T ss_pred hCCccccCCCcceEEEeCCCcEEEeecccccccccc------------------ccCCCccccccCHHHhCC-CCCCchh
Confidence 999999999999999999999999999999754311 122367889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
||||||+++|+|++ ||......+...... .+..+......++.+.++|++||+.||.+|||+.++++.
T Consensus 196 Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 267 (278)
T 1byg_A 196 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVE--KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 267 (278)
T ss_dssp HHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHT--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHh--cCCCCCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHH
Confidence 99999999999986 665544333332222 222333445667899999999999999999999999864
|
| >3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=347.32 Aligned_cols=253 Identities=27% Similarity=0.388 Sum_probs=200.0
Q ss_pred CCc-eEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDF-EELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y-~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++| ++++.||+|+||+||+|.+ ..+|+.||||+++.. ........+.+|+.+|+.++||||+++++++.+.
T Consensus 30 ~r~~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 105 (318)
T 3lxp_A 30 KRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKAD-AGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDA--- 105 (318)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTT-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEET---
T ss_pred HHHHhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccc-cChHHHHHHHHHHHHHHhCCCcchhhEEEEEecC---
Confidence 444 9999999999999988865 347899999999754 3445567799999999999999999999998542
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||+ ++|.+++... .+++..++.++.||+.||+|
T Consensus 106 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~i~~~l~~~l~~ 149 (318)
T 3lxp_A 106 -----------------------------------GAASLQLVMEYVPLGSLRDYLPRH-SIGLAQLLLFAQQICEGMAY 149 (318)
T ss_dssp -----------------------------------TTTEEEEEECCCTTCBHHHHGGGS-CCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecccCCcHHHHHhhC-CCCHHHHHHHHHHHHHHHHH
Confidence 2457899999997 5999988764 49999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++....... .........||+.|+|||++.+ ..++.
T Consensus 150 LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~~ 216 (318)
T 3lxp_A 150 LHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHE------------YYRVREDGDSPVFWYAPECLKE-YKFYY 216 (318)
T ss_dssp HHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCS------------EEEC---CCCCGGGCCHHHHHH-CEEEH
T ss_pred HHhCCccCCCCchheEEEcCCCCEEECCcccccccccccc------------ccccccCCCCCceeeChHHhcC-CCCCc
Confidence 9999999999999999999999999999999986532210 0111234568899999999987 56889
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHH-------------HHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQ-------------IVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP 652 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~-------------~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP 652 (1170)
++|||||||++|+|++ ||....... ............++.....++++.+||++||+.||.+||
T Consensus 217 ~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp 296 (318)
T 3lxp_A 217 ASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRP 296 (318)
T ss_dssp HHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHHHhcccCCCCCccccHHHHHHHHHHcCCCcccCc
Confidence 9999999999999997 554332210 111112223334444556778999999999999999999
Q ss_pred CHHHHHhc
Q 001059 653 SATELLQD 660 (1170)
Q Consensus 653 ta~eiL~~ 660 (1170)
|+.++++.
T Consensus 297 s~~ell~~ 304 (318)
T 3lxp_A 297 TFENLIPI 304 (318)
T ss_dssp CHHHHHHH
T ss_pred CHHHHHHH
Confidence 99999863
|
| >2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-37 Score=364.22 Aligned_cols=254 Identities=30% Similarity=0.459 Sum_probs=188.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+.|...+.||+|+||+||.+ ...+|+.||||++... ..+.+.+|+.+|+.+ +|||||++++++.
T Consensus 15 ~~~~~~~~LG~G~~g~V~~~-~~~~g~~vAvK~~~~~-----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~--------- 79 (434)
T 2rio_A 15 NLVVSEKILGYGSSGTVVFQ-GSFQGRPVAVKRMLID-----FCDIALMEIKLLTESDDHPNVIRYYCSET--------- 79 (434)
T ss_dssp SCEEEEEEEEECSTTCEEEE-EESSSSEEEEEEEEGG-----GHHHHHHHHHHHHHHTTSTTBCCEEEEEE---------
T ss_pred heeeccCeEeeCCCeEEEEE-EEECCeEEEEEEEcHH-----HHHHHHHHHHHHHhccCCCCcCeEEEEEe---------
Confidence 45666788999999999875 4558999999998642 235678999999887 8999999998863
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCC-------CHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHF-------DKELAWHLFRQIVEGL 506 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l-------~e~~~~~i~~qI~~gL 506 (1170)
....+|+|||||+++|.+++...... ++..++.++.||+.||
T Consensus 80 -------------------------------~~~~~~lv~E~~~gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL 128 (434)
T 2rio_A 80 -------------------------------TDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGV 128 (434)
T ss_dssp -------------------------------CSSEEEEEECCCSEEHHHHHHTC------------CCHHHHHHHHHHHH
T ss_pred -------------------------------cCCeEEEEEecCCCCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHH
Confidence 24678999999999999999765433 2334578999999999
Q ss_pred HHHHhCCccccCCCCCceeecCC-------------CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDAR-------------NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~-------------~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
+|||++||+||||||+|||++.+ +.+||+|||+|+....... .........+||+.
T Consensus 129 ~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~~~~~~~-----------~~~~~~~~~~gt~~ 197 (434)
T 2rio_A 129 AHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQS-----------SFRTNLNNPSGTSG 197 (434)
T ss_dssp HHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEECCC-------------------------CCT
T ss_pred HHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccceecCCCCc-----------cceeeecCCCCCCC
Confidence 99999999999999999999754 4899999999987542210 00111234589999
Q ss_pred CCCcccccC------CCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCC----ccccCCHHHHHH
Q 001059 574 YTAPEIEQG------WPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPP----SWVAKFSEQESL 639 (1170)
Q Consensus 574 Y~APE~l~~------~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~----~~~~~~~e~~~L 639 (1170)
|+|||++.+ ...++.++|||||||++|||++ ||......+. ..+......+. .....++++.+|
T Consensus 198 y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~~~~~l 275 (434)
T 2rio_A 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRES--NIIRGIFSLDEMKCLHDRSLIAEATDL 275 (434)
T ss_dssp TSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTTTHHH--HHHHTCCCCCCCTTCCCHHHHHHHHHH
T ss_pred ccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCchhhHH--HHhcCCCCcccccccccccchHHHHHH
Confidence 999999865 2458999999999999999996 7765433332 12222222211 112334688999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|.+||+.||.+|||+.++++||||....
T Consensus 276 i~~~L~~dP~~Rps~~eil~hp~f~~~~ 303 (434)
T 2rio_A 276 ISQMIDHDPLKRPTAMKVLRHPLFWPKS 303 (434)
T ss_dssp HHHHTCSSGGGSCCHHHHHTSGGGSCHH
T ss_pred HHHHhhCChhhCCCHHHHHhCCccCCcH
Confidence 9999999999999999999999997654
|
| >3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-37 Score=359.03 Aligned_cols=252 Identities=21% Similarity=0.267 Sum_probs=190.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..|++.+.||+|+||+||+|++..++ ..||||.++.. ........+.+|+.++++++||||++++++|.+.
T Consensus 89 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~----- 162 (373)
T 3c1x_A 89 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRI-TDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS----- 162 (373)
T ss_dssp EEEEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSC-SCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCC-----
T ss_pred ceeecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCC-CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcC-----
Confidence 35888999999999999999986443 46899988643 3334567899999999999999999999887432
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|+|||||+ ++|.+++... ..+++..++.++.||+.||+||
T Consensus 163 ----------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~~L 208 (373)
T 3c1x_A 163 ----------------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFL 208 (373)
T ss_dssp ----------------------------------SSCCEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCCeEEEEECCCCCCHHHHHhhcccCCCHHHHHHHHHHHHHHHHHH
Confidence 235689999997 5999999765 4589999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++......... ........+|+.|+|||++.+ ..++.+
T Consensus 209 H~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~-----------~~~~~~~~~~~~y~aPE~~~~-~~~~~~ 276 (373)
T 3c1x_A 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-----------VHNKTGAKLPVKWMALESLQT-QKFTTK 276 (373)
T ss_dssp HHTTCCCSCCCGGGEEECTTCCEEECCC--------------------------------CCGGGSCHHHHHH-CCCCHH
T ss_pred HHCCEecCccchheEEECCCCCEEEeecccccccccccccc-----------ccccCCCCCcccccChHHhcC-CCCCcH
Confidence 99999999999999999999999999999998653221110 111234568899999999987 568999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||......+...... .+..+.....+++.+.++|.+||+.||.+|||+.+++++
T Consensus 277 ~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~--~~~~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~ 349 (373)
T 3c1x_A 277 SDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLL--QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 349 (373)
T ss_dssp HHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 999999999999997 565443333322222 222333334567899999999999999999999999975
|
| >1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=364.19 Aligned_cols=245 Identities=24% Similarity=0.339 Sum_probs=196.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. .+..||||+++..... .+.+.+|+.+|++++||||+++++++.+
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hp~iv~~~~~~~~-------- 250 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 250 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhHceeeeeecCCCCeEEEEEEEC-CCceEEEEEeccCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEcC--------
Confidence 468999999999999999999997 4567999998754332 4679999999999999999999988621
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
..+|+|||||+ |+|.+++.. ...+++..++.++.||+.||+|||
T Consensus 251 ---------------------------------~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH 297 (452)
T 1fmk_A 251 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 297 (452)
T ss_dssp ---------------------------------SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 23689999996 599999974 346999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++
T Consensus 298 ~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~s 362 (452)
T 1fmk_A 298 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 362 (452)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------------------------CCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCeeCCCCChhhEEECCCCCEEECCCccceecCCCce--------------ecccCCcccccccCHhHHhc-CCCCccc
Confidence 99999999999999999999999999999986532210 01123457889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||......+...... .+..++....+++.+.+||.+||+.||.+|||+.++++.
T Consensus 363 DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~ 434 (452)
T 1fmk_A 363 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434 (452)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence 99999999999997 776655555443332 222333344677899999999999999999999999863
|
| >4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-36 Score=378.44 Aligned_cols=244 Identities=22% Similarity=0.286 Sum_probs=197.7
Q ss_pred eeeccCCcEEEEEEEEc--cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNK--LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~--~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.||+|+||+||+|.+. .+++.||||+++.........+.+.+|+.+|+.++|||||+++++|.
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~-------------- 440 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICE-------------- 440 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEE--------------
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe--------------
Confidence 47999999999999664 56789999999765555555678999999999999999999999872
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...+++|||||+ ++|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 441 ---------------------------~~~~~lv~E~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~~L~yLH~~~iiHr 493 (635)
T 4fl3_A 441 ---------------------------AESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 493 (635)
T ss_dssp ---------------------------SSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTCCCS
T ss_pred ---------------------------cCCEEEEEEccCCCCHHHHHhhCCCCCHHHHHHHHHHHHHHHHHHHHCCEeCC
Confidence 123689999997 5999999988889999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+|+.+...... ....+...||+.|+|||++.+ ..++.++|||||||
T Consensus 494 DLkp~NILl~~~~~~kL~DFGla~~~~~~~~~------------~~~~~~~~~t~~y~APE~~~~-~~~~~~sDvwSlGv 560 (635)
T 4fl3_A 494 DLAARNVLLVTQHYAKISDFGLSKALRADENY------------YKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGV 560 (635)
T ss_dssp CCSGGGEEEEETTEEEECCTTHHHHTTC-------------------------CGGGSCHHHHHH-CCCCHHHHHHHHHH
T ss_pred CCChHhEEEeCCCCEEEEEcCCccccccCccc------------cccccCCCCceeeeChhhhcC-CCCCcHHHHHHHHH
Confidence 99999999999999999999999876432110 111234467899999999987 56999999999999
Q ss_pred HHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 598 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 598 iL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||++ ||......+...... .+..++....+++++.+||.+||+.||.+|||+.++++.
T Consensus 561 ~l~ellt~G~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 625 (635)
T 4fl3_A 561 LMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVELR 625 (635)
T ss_dssp HHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 9999996 787665555443333 233333445677899999999999999999999999864
|
| >2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=354.82 Aligned_cols=252 Identities=26% Similarity=0.327 Sum_probs=196.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|+++ +|+.||||++.... ....+.+.+|+.+++.++||||++++++|.+
T Consensus 36 ~~~~~y~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------ 106 (321)
T 2qkw_B 36 EATNNFDHKFLIGHGVFGKVYKGVLR-DGAKVALKRRTPES--SQGIEEFETEIETLSFCRHPHLVSLIGFCDE------ 106 (321)
T ss_dssp CCCCCCSCCCCSCBCSSSEEEEEECT-TCCEEEEEECCSCC--SSHHHHHHHHHHGGGSCCCTTBCCEEEECCC------
T ss_pred HHHhccCccceeecCCCeeEEEEEEC-CCCEEEEEEecccC--hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcC------
Confidence 34578999999999999999999975 79999999876443 2345679999999999999999999988732
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----CCCHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----HFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----~l~e~~~~~i~~qI~~gL 506 (1170)
...+|+|||||+ ++|.+++.... .+++..++.++.||+.||
T Consensus 107 ----------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l 152 (321)
T 2qkw_B 107 ----------------------------------RNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGL 152 (321)
T ss_dssp ----------------------------------TTCCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCeEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHH
Confidence 345699999997 59998886543 589999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... ........||+.|+|||++.+ ..+
T Consensus 153 ~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~-------------~~~~~~~~gt~~y~aPE~~~~-~~~ 218 (321)
T 2qkw_B 153 HYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQ-------------THLSTVVKGTLGYIDPEYFIK-GRL 218 (321)
T ss_dssp HHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSC-------------CCCBCCCEEETTTCCHHHHHH-CBC
T ss_pred HHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccc-------------cccccccCCCccccCHHHhcC-CCC
Confidence 999999999999999999999999999999999975421110 011234569999999999987 568
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHH-----HHHHHhhhcCCC---------CCccccCCHHHHHHHHHccCCCCC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQ-----IVLSDLKQKGEL---------PPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~-----~~~~~l~~~~~~---------p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
+.++|||||||++|||++ ||....+.+ ...........+ .......++.+.+++.+||+.||.
T Consensus 219 ~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~ 298 (321)
T 2qkw_B 219 TEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSE 298 (321)
T ss_dssp CTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCCCSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGG
T ss_pred CcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccHHHhcChhhccccCHHHHHHHHHHHHHHcCCCcc
Confidence 999999999999999997 665332110 000000001111 111123345788999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+|||+.+++++
T Consensus 299 ~Rps~~ell~~ 309 (321)
T 2qkw_B 299 DRPSMGDVLWK 309 (321)
T ss_dssp GSCCHHHHHHH
T ss_pred cCcCHHHHHHH
Confidence 99999999976
|
| >4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-37 Score=362.03 Aligned_cols=253 Identities=23% Similarity=0.363 Sum_probs=198.6
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||+||+|+++.+|+.||||+++.... ....+.+.+|+.+|+.++||||+++++++.+.
T Consensus 7 ~~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~------ 79 (396)
T 4eut_A 7 SNHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISF-LRPVDVQMREFEVLKKLNHKNIVKLFAIEEET------ 79 (396)
T ss_dssp SSEEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGG-GSCHHHHHHHHHHHHHCCCTTBCCEEEEEECT------
T ss_pred CCCceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccc-cchHHHHHHHHHHHHhcCCCCCCeEEEeeccC------
Confidence 34689999999999999999999999999999999974322 22346788999999999999999999987432
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCC---CCHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDH---FDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~---l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|+|||||+ ++|.+++..... +++..++.++.||+.||+|
T Consensus 80 --------------------------------~~~~~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~ 127 (396)
T 4eut_A 80 --------------------------------TTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNH 127 (396)
T ss_dssp --------------------------------TTCCEEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCeeEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHH
Confidence 2346799999996 599999876443 9999999999999999999
Q ss_pred HHhCCccccCCCCCceee----cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-
Q 001059 509 IHGQGIIHRDLTPNNIFF----DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW- 583 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi----~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~- 583 (1170)
||++||+||||||+|||+ +.++.+||+|||+++...... .....+||+.|+|||++.+.
T Consensus 128 LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~ 191 (396)
T 4eut_A 128 LRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE----------------QFVSLYGTEEYLHPDMYERAV 191 (396)
T ss_dssp HHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGG----------------GSSCSSSCCTTCCHHHHHHHC
T ss_pred HHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCC----------------ccccccCCccccCHHHhhccc
Confidence 999999999999999999 777889999999998653221 12345799999999998641
Q ss_pred ------CCCCccchhHHHHHHHHHhhc---CCCch----hHHHHHHHHhhhcCC-------------------CCC---c
Q 001059 584 ------PKIDEKADMYSLGIVFFELWH---PFSTA----MERQIVLSDLKQKGE-------------------LPP---S 628 (1170)
Q Consensus 584 ------~~~~~ksDIwSlGviL~ELlt---Pf~~~----~~~~~~~~~l~~~~~-------------------~p~---~ 628 (1170)
..++.++|||||||++|||++ ||.+. ...+.....+..... .+. .
T Consensus 192 ~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l 271 (396)
T 4eut_A 192 LRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSL 271 (396)
T ss_dssp C--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSS
T ss_pred cccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCCCcccchhheeccCCCcccCccCCccccc
Confidence 246789999999999999997 76532 223333333332211 010 0
Q ss_pred cccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 629 WVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 629 ~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
....++.+.++|++||..||.+|||+.+++++
T Consensus 272 ~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~~ 303 (396)
T 4eut_A 272 SRGLQVLLTPVLANILEADQEKCWGFDQFFAE 303 (396)
T ss_dssp CHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHH
T ss_pred chHHHhhchHHHHHhhccChhhhccHHHHHHH
Confidence 01223467899999999999999999999864
|
| >1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-36 Score=341.71 Aligned_cols=253 Identities=25% Similarity=0.353 Sum_probs=194.2
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEcc-CCc--EEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKL-DGR--HYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~-tg~--~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~ 428 (1170)
..++|++.+.||+|+||+||+|++.. +++ .||||+++.... .....+.+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~--- 92 (291)
T 1u46_A 16 GEKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT--- 92 (291)
T ss_dssp CGGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred chhHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcc---
Confidence 35789999999999999999999753 333 699999875432 23456789999999999999999999998732
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL 506 (1170)
...+++|||++ ++|.+++... ..+++..++.++.||+.||
T Consensus 93 --------------------------------------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l 134 (291)
T 1u46_A 93 --------------------------------------PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGM 134 (291)
T ss_dssp --------------------------------------SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCceeeEecccCCCHHHHHHhccCCcCHHHHHHHHHHHHHHH
Confidence 12589999997 6999988764 5699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..+
T Consensus 135 ~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~ 201 (291)
T 1u46_A 135 GYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDD------------HYVMQEHRKVPFAWCAPESLKT-RTF 201 (291)
T ss_dssp HHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CC------------EEEC-----CCGGGCCHHHHHH-CEE
T ss_pred HHHHhCCcccCCCchheEEEcCCCCEEEcccccccccccccc------------chhhhccCCCCceeeCchhhcC-CCC
Confidence 999999999999999999999999999999999986532210 0111234568889999999987 568
Q ss_pred CccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 587 DEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.++||||||+++|+|++ ||......+....... ....++.....++++.++|.+||+.||.+|||+.+++++
T Consensus 202 ~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~ 278 (291)
T 1u46_A 202 SHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDF 278 (291)
T ss_dssp EHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred CchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHc-cCCCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence 999999999999999996 7766555554444333 333344445677899999999999999999999999874
|
| >2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-36 Score=345.19 Aligned_cols=253 Identities=27% Similarity=0.402 Sum_probs=199.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEE----ccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKN----KLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~----~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++++.||+|+||.||+|++ ..+|+.||||++... .....+.+.+|+.+++.++||||+++++++...
T Consensus 40 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~--- 114 (326)
T 2w1i_A 40 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHS--TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSA--- 114 (326)
T ss_dssp GGGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSC--CSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----
T ss_pred HHHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccC--CHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEec---
Confidence 46899999999999999999994 568999999998743 334567899999999999999999999987432
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~ 507 (1170)
....+|+||||++ ++|.+++... ..+++..++.++.||+.||+
T Consensus 115 -----------------------------------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~aL~ 159 (326)
T 2w1i_A 115 -----------------------------------GRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGME 159 (326)
T ss_dssp --------------------------------------CCEEEECCCTTCBHHHHHHHSTTSSCHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCceEEEEECCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHH
Confidence 1235799999997 5999999875 45999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++....... .........+|+.|+|||++.+ ..++
T Consensus 160 ~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~------------~~~~~~~~~~~~~y~aPE~~~~-~~~~ 226 (326)
T 2w1i_A 160 YLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE------------YYKVKEPGESPIFWYAPESLTE-SKFS 226 (326)
T ss_dssp HHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCS------------EEECSSCCSCCGGGCCHHHHHH-CEEE
T ss_pred HHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhcccccc------------ccccccCCCCceeEECchhhcC-CCCC
Confidence 99999999999999999999999999999999986532210 0011233467889999999987 4689
Q ss_pred ccchhHHHHHHHHHhhc---CCCchhHH---------------HHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCC
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAMER---------------QIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPS 649 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~~~---------------~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~ 649 (1170)
.++|||||||++|||++ ||...... ......+. ....++.....++++.+||++||+.||.
T Consensus 227 ~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~dP~ 305 (326)
T 2w1i_A 227 VASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIELLK-NNGRLPRPDGCPDEIYMIMTECWNNNVN 305 (326)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHSCSSGG
T ss_pred chhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHHHHhh-cCCCCCCCCcccHHHHHHHHHHcCCChh
Confidence 99999999999999997 44322110 01112222 2223334456778999999999999999
Q ss_pred CCCCHHHHHhc
Q 001059 650 DRPSATELLQD 660 (1170)
Q Consensus 650 ~RPta~eiL~~ 660 (1170)
+|||+.++++.
T Consensus 306 ~Rps~~el~~~ 316 (326)
T 2w1i_A 306 QRPSFRDLALR 316 (326)
T ss_dssp GSCCHHHHHHH
T ss_pred hCcCHHHHHHH
Confidence 99999999864
|
| >3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-37 Score=355.14 Aligned_cols=251 Identities=25% Similarity=0.328 Sum_probs=193.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|++. +|+.||||++...... .....+.+|+.+++.++||||++++++|..
T Consensus 29 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-------- 98 (326)
T 3uim_A 29 SDNFSNKNILGRGGFGKVYKGRLA-DGTLVAVKRLKEERTQ-GGELQFQTEVEMISMAVHRNLLRLRGFCMT-------- 98 (326)
T ss_dssp TTSSCSTTEEECCSSSEEEEECCS-SSCCEEEEECCC------CCCHHHHHHHGGGTCCCTTBCCCCEEECC--------
T ss_pred hhccccceeEecCCCcEEEEEEec-CCCEEEEEEeccccCc-hHHHHHHHHHHHHHhccCCCccceEEEEec--------
Confidence 468899999999999999999865 7999999998754322 122368899999999999999999998732
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD----HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~----~l~e~~~~~i~~qI~~gL~y 508 (1170)
....++|||||+ ++|.+++.... .+++..++.++.||+.||+|
T Consensus 99 --------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~ 146 (326)
T 3uim_A 99 --------------------------------PTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAY 146 (326)
T ss_dssp --------------------------------SSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 345689999996 59999997643 39999999999999999999
Q ss_pred HHhC---CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 509 IHGQ---GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 509 LHs~---gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
||++ ||+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+ ..
T Consensus 147 lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--------------~~~~~~~~gt~~y~aPE~~~~-~~ 211 (326)
T 3uim_A 147 LHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKD--------------THVTTAVRGTIGHIAPEYLST-GK 211 (326)
T ss_dssp HHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSS--------------SCEECCCCSCGGGCCHHHHHH-SE
T ss_pred HHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccc--------------ccccccccCCcCccCHHHhcc-CC
Confidence 9999 99999999999999999999999999998653211 011233469999999999977 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHH-------HHHHHHhhhcCCC---------CCccccCCHHHHHHHHHccCC
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMER-------QIVLSDLKQKGEL---------PPSWVAKFSEQESLLRRLMSP 646 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~-------~~~~~~l~~~~~~---------p~~~~~~~~e~~~LI~~~L~~ 646 (1170)
++.++|||||||++|+|++ ||...... ............. +......++.+.+++.+||+.
T Consensus 212 ~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~ 291 (326)
T 3uim_A 212 SSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQS 291 (326)
T ss_dssp ECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCS
T ss_pred CCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHhhchhhhhhcChhhccccCHHHHHHHHHHHHHHhCc
Confidence 8999999999999999997 66422110 0011110001100 111122335789999999999
Q ss_pred CCCCCCCHHHHHhcc
Q 001059 647 SPSDRPSATELLQDA 661 (1170)
Q Consensus 647 dP~~RPta~eiL~~~ 661 (1170)
||.+|||+.+++++.
T Consensus 292 dP~~Rps~~ell~~L 306 (326)
T 3uim_A 292 SPMERPKMSEVVRML 306 (326)
T ss_dssp CGGGSCCHHHHHHHH
T ss_pred CCccCCCHHHHHHHh
Confidence 999999999999874
|
| >3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-36 Score=345.14 Aligned_cols=259 Identities=22% Similarity=0.350 Sum_probs=188.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHH--HHhccCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVAT--LSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~i--L~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
..+++|++.+.||+|+||+||+|++ +|+.||||+++... ...+..|..+ ++.++||||+++++.+....
T Consensus 10 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~-----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~-- 80 (336)
T 3g2f_A 10 LDLDNLKLLELIGRGRYGAVYKGSL--DERPVAVKVFSFAN-----RQNFINEKNIYRVPLMEHDNIARFIVGDERVT-- 80 (336)
T ss_dssp CCTTSEEEEEEEEECSSEEEEEEEE--TTEEEEEEEEEGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC--
T ss_pred cChHHhheeeecccCCCeEEEEEEE--CCeEEEEEEeeccc-----hhhHHHHHHHHHHHhccCcchhhheecccccc--
Confidence 3468999999999999999999977 58999999997432 2334444444 55689999999998763321
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
......+|+|||||+ ++|.+++... ..++..++.++.||+.||+|
T Consensus 81 ---------------------------------~~~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~i~~qi~~~L~~ 126 (336)
T 3g2f_A 81 ---------------------------------ADGRMEYLLVMEYYPNGSLXKYLSLH-TSDWVSSCRLAHSVTRGLAY 126 (336)
T ss_dssp ---------------------------------TTSCEEEEEEECCCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCCceEEEEEecCCCCcHHHHHhhc-ccchhHHHHHHHHHHHHHHH
Confidence 012456899999996 5999998654 45899999999999999999
Q ss_pred HHhC---------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccc
Q 001059 509 IHGQ---------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEI 579 (1170)
Q Consensus 509 LHs~---------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~ 579 (1170)
||++ ||+||||||+|||++.++.+||+|||+++.+........ ..........+||+.|+|||+
T Consensus 127 LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~-------~~~~~~~~~~~gt~~y~aPE~ 199 (336)
T 3g2f_A 127 LHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRP-------GEEDNAAISEVGTIRYMAPEV 199 (336)
T ss_dssp HHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC----------------CCTTSCGGGCCHHH
T ss_pred HHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCc-------cccccccccCCCccceeCchh
Confidence 9999 999999999999999999999999999987543221100 001112345689999999999
Q ss_pred ccCC------CCCCccchhHHHHHHHHHhhc---CCCchhH-----------------HHHHHHHhhh---cCCCCCccc
Q 001059 580 EQGW------PKIDEKADMYSLGIVFFELWH---PFSTAME-----------------RQIVLSDLKQ---KGELPPSWV 630 (1170)
Q Consensus 580 l~~~------~~~~~ksDIwSlGviL~ELlt---Pf~~~~~-----------------~~~~~~~l~~---~~~~p~~~~ 630 (1170)
+.+. ..++.++|||||||++|||++ ||..... .......... ...+|..+.
T Consensus 200 ~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (336)
T 3g2f_A 200 LEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWK 279 (336)
T ss_dssp HTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCC
T ss_pred hcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccc
Confidence 9863 235678999999999999985 4432110 0111111111 122333222
Q ss_pred c---CCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 631 A---KFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 631 ~---~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
. .++++.+||.+||+.||.+|||+.++++.
T Consensus 280 ~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~ 312 (336)
T 3g2f_A 280 ENSLAVRSLKETIEDCWDQDAEARLTAQXAEER 312 (336)
T ss_dssp CCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred cccchHHHHHHHHHHHhcCChhhCcchHHHHHH
Confidence 2 33578999999999999999999999863
|
| >2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.1e-36 Score=372.07 Aligned_cols=249 Identities=20% Similarity=0.263 Sum_probs=196.6
Q ss_pred CCceEEe-eeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQ-PLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~-~LG~G~fG~Vyka~~~~--tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+++.+.. .||+|+||+||+|.++. ++..||||+++... .....+.+.+|+.+|+.++|||||+++++|..
T Consensus 335 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~-~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~------ 407 (613)
T 2ozo_A 335 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGT-EKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------ 407 (613)
T ss_dssp TSEEEEEEEEEECSSSEEEEEEEECSSCEEEEEEEECCCCC-SSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES------
T ss_pred cceeEcCcEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCC-ChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc------
Confidence 4556666 89999999999998863 46679999997542 23346789999999999999999999998721
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
..+|+|||||+ |+|.+++... ..+++..++.++.||+.||+||
T Consensus 408 -----------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~~L~~L 452 (613)
T 2ozo_A 408 -----------------------------------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 452 (613)
T ss_dssp -----------------------------------SSEEEEEECCTTCBHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCeEEEEEeCCCCcHHHHHhhccCCCCHHHHHHHHHHHHHHHHHH
Confidence 24799999997 5899988654 4599999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+++.+...... ........+|+.|+|||++.+ ..++.+
T Consensus 453 H~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~------------~~~~~~~~~~~~y~APE~~~~-~~~~~~ 519 (613)
T 2ozo_A 453 EEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 519 (613)
T ss_dssp HHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC--------------------------CCTTSCHHHHHH-CCCCHH
T ss_pred HHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCce------------eeeccCCCCccceeCHhhhcC-CCCCcH
Confidence 9999999999999999999999999999999875322100 011123456789999999987 579999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||......+....+. .+..++....+++++.+||.+||+.||.+||++.++++.
T Consensus 520 sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~ 592 (613)
T 2ozo_A 520 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 592 (613)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH--cCCCCCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 999999999999996 777655555443332 233333445677899999999999999999999999863
|
| >2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-36 Score=366.64 Aligned_cols=245 Identities=24% Similarity=0.340 Sum_probs=200.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|.+. .+..||||+++..... .+.+.+|+.+|++++||||+++++++.+
T Consensus 266 ~~~~~~~~~lG~G~fg~Vy~~~~~-~~~~vavK~~~~~~~~---~~~~~~E~~~l~~l~hpniv~~~~~~~~-------- 333 (535)
T 2h8h_A 266 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 333 (535)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEET-TTEEEEEEEECTTSSC---HHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred hhhhhhheecccCCCeEEEEEEEC-CCceEEEEEeCCCCCC---HHHHHHHHHHHHhCCCCCEeeEEEEEee--------
Confidence 468999999999999999999997 4567999999754332 4679999999999999999999988721
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
..+|||||||. ++|.+++... ..+++..++.++.||+.||+|||
T Consensus 334 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH 380 (535)
T 2h8h_A 334 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 380 (535)
T ss_dssp ---------------------------------SSCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34689999997 5999999743 46999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+++....... .......+|+.|+|||++.+ ..++.++
T Consensus 381 ~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~--------------~~~~~~~~~~~y~aPE~~~~-~~~~~~s 445 (535)
T 2h8h_A 381 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 445 (535)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHH--------------HTTCSTTSCGGGSCHHHHHH-CCCCHHH
T ss_pred hCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCce--------------ecccCCcCcccccCHHHhcc-CCCCchh
Confidence 99999999999999999999999999999986542211 01123457889999999987 5689999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||+||||++ ||......+...... .+...+....+++++.+||.+||+.||++|||+.+|++.
T Consensus 446 DvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~ 517 (535)
T 2h8h_A 446 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE--RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 517 (535)
T ss_dssp HHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 99999999999997 776655554443332 222233334667899999999999999999999999863
|
| >3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7 | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-36 Score=343.72 Aligned_cols=255 Identities=23% Similarity=0.365 Sum_probs=190.3
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc--cCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL--QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l--~HpnIV~l~~~~~e~~ 427 (1170)
.....++|++.+.||+|+||.||+|++. |+.||||++... ......+|.+++..+ +||||+++++++....
T Consensus 32 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~--~~~vavK~~~~~-----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~ 104 (337)
T 3mdy_A 32 QRTIAKQIQMVKQIGKGRYGEVWMGKWR--GEKVAVKVFFTT-----EEASWFRETEIYQTVLMRHENILGFIAADIKGT 104 (337)
T ss_dssp HTTHHHHCEEEEEEEEETTEEEEEEEET--TEEEEEEEEEGG-----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESC
T ss_pred ccccccceEEEeEeecCCCeEEEEEEEC--CceEEEEEEecc-----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCC
Confidence 3445689999999999999999999986 899999998632 233455566666554 9999999999885421
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL 506 (1170)
.....+|+|||||++ +|.+++.. ..+++..++.++.||+.||
T Consensus 105 ------------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l 147 (337)
T 3mdy_A 105 ------------------------------------GSWTQLYLITDYHENGSLYDYLKS-TTLDAKSMLKLAYSSVSGL 147 (337)
T ss_dssp ------------------------------------GGGCEEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCCCceEEEEeccCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHH
Confidence 123578999999974 99999865 4699999999999999999
Q ss_pred HHHHhC--------CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 507 AHIHGQ--------GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 507 ~yLHs~--------gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
+|||++ ||+||||||+|||++.++.+||+|||+++........ ........+||+.|+|||
T Consensus 148 ~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE 216 (337)
T 3mdy_A 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE-----------VDIPPNTRVGTKRYMPPE 216 (337)
T ss_dssp HHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC--------------------CCSSCSCGGGCCHH
T ss_pred HHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeecccccc-----------ccCCCCCCccCcceeChh
Confidence 999999 9999999999999999999999999999765322110 111123468999999999
Q ss_pred cccCCCCCCc------cchhHHHHHHHHHhhcC-------------CCchh----HHHHHHHHhhhcC---CCCCcc--c
Q 001059 579 IEQGWPKIDE------KADMYSLGIVFFELWHP-------------FSTAM----ERQIVLSDLKQKG---ELPPSW--V 630 (1170)
Q Consensus 579 ~l~~~~~~~~------ksDIwSlGviL~ELltP-------------f~~~~----~~~~~~~~l~~~~---~~p~~~--~ 630 (1170)
++.+. .+.. ++|||||||++|||++. |.... ............. ..|..+ .
T Consensus 217 ~~~~~-~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (337)
T 3mdy_A 217 VLDES-LNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIKKLRPSFPNRWSSD 295 (337)
T ss_dssp HHTTC-CCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGS
T ss_pred hcccc-cCCccccCccccchHHHHHHHHHHHhccCcccccccccccHhhhcCCCCchhhhHHHHhhhccCccccccchhh
Confidence 99873 3444 39999999999999862 32211 1111222222111 122211 1
Q ss_pred cCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 631 AKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 631 ~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.+++++.+||.+||+.||.+|||+.+++++
T Consensus 296 ~~~~~l~~li~~~l~~dP~~Rps~~ell~~ 325 (337)
T 3mdy_A 296 ECLRQMGKLMTECWAHNPASRLTALRVKKT 325 (337)
T ss_dssp HHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence 345678999999999999999999999986
|
| >2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-36 Score=346.27 Aligned_cols=253 Identities=25% Similarity=0.349 Sum_probs=196.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.+.||+|+||.||+|.+.. .||+|+++.........+.+.+|+.++++++||||+++++++.+
T Consensus 31 ~~~~~~~~~~lg~G~~g~V~~~~~~~---~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------- 100 (319)
T 2y4i_B 31 PFEQLEIGELIGKGRFGQVYHGRWHG---EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS------- 100 (319)
T ss_dssp CCSCEECCCBCCCSSSSEEEEEEESS---SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEEC-------
T ss_pred CHHHeEEeeEeccCCceEEEEEEEcC---eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEec-------
Confidence 35789999999999999999999863 49999997654444444567889999999999999999998743
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++||||+ ++|.+++.... .+++..++.++.||+.||+|||
T Consensus 101 ---------------------------------~~~~~iv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH 147 (319)
T 2y4i_B 101 ---------------------------------PPHLAIITSLCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH 147 (319)
T ss_dssp ---------------------------------SSCEEEECBCCCSEEHHHHTTSSCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCceEEEeecccCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 59999997654 6999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC--------
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG-------- 582 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~-------- 582 (1170)
++||+||||||+|||++ ++.+||+|||+++......... .........||+.|+|||++.+
T Consensus 148 ~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~----------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~ 216 (319)
T 2y4i_B 148 AKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGR----------REDKLRIQNGWLCHLAPEIIRQLSPDTEED 216 (319)
T ss_dssp HTTCCCCCCCSTTEEEC---CCEECCCSCCC--------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CC
T ss_pred hCCccccCCChhhEEEe-CCCEEEeecCCccccccccccc----------cccccccCCCcccccChHHhhhcccccccc
Confidence 99999999999999998 6899999999987643211100 0111234569999999999875
Q ss_pred CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 583 WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 583 ~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
...++.++|||||||++|||++ ||............... ...+......++++.++|.+||+.||.+|||+.++++
T Consensus 217 ~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~ 295 (319)
T 2y4i_B 217 KLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG-MKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMD 295 (319)
T ss_dssp CSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT-CCCCCCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred ccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC-CCCCCCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 2347899999999999999997 88766555444333322 2222222345678999999999999999999999987
Q ss_pred c
Q 001059 660 D 660 (1170)
Q Consensus 660 ~ 660 (1170)
.
T Consensus 296 ~ 296 (319)
T 2y4i_B 296 M 296 (319)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1nj8_A Proline-tRNA synthetase, proline--tRNA ligase; class-II tRNA synthetase; 3.20A {Methanocaldococcus jannaschii} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=6.4e-36 Score=356.78 Aligned_cols=335 Identities=9% Similarity=0.072 Sum_probs=266.7
Q ss_pred ccccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc---CCCcccccceEEEeccC----C
Q 001059 706 AGTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHG----G 774 (1170)
Q Consensus 706 ~~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~----G 774 (1170)
++-++....++|+.||+|.++.+++.|++.++++|+++||++|.||+| ++. ++.+.+.++||+|.|++ |
T Consensus 18 ~~li~~~~~~~G~~d~lP~g~~l~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~~~G~~~~~~~emy~~~d~g~~~~~ 97 (459)
T 1nj8_A 18 AEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLD 97 (459)
T ss_dssp TSSCBCCSTTSSCCBBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHCSSSGGGGGGCEEEEESSSSEEE
T ss_pred CCCccccCCCCceEEECChHHHHHHHHHHHHHHHHHHcCCEEeeCCcccCHHHHhhhcCcccccchhhEEEeccCcccCC
Confidence 344444356799999999999999999999999999999999999999 332 23466789999999987 8
Q ss_pred ceeeecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcCCC-CC---CCCcee-EeEEEEeCCCCcccHHH---HHHH
Q 001059 775 DLLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYL-QGDFDIIGGASALTEAE---VLKV 842 (1170)
Q Consensus 775 ~~laLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~-~~---~~~ef~-Q~GvEiiG~~~~~aDaE---vi~l 842 (1170)
+.++|||+.|++++|+++.+ +..|+|+||+|+|||+|++ +. |.|||+ |+|++++|.....+|+| +|.+
T Consensus 98 ~~l~LRP~~~~~i~~~~~~~~~s~r~LP~rl~qig~~fR~E~~~~rGl~R~REF~qq~d~~~~~~~~~~a~~e~~~~i~~ 177 (459)
T 1nj8_A 98 VKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISI 177 (459)
T ss_dssp EEEEECSSSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCCSCCBTTTBCSBCSCEEEEEEEESSHHHHHHHHHHHHHH
T ss_pred CeeEECCCCcHHHHHHHHHhhhhcccCCeEEEEEccEecCccCCCCCceEeeeeeccCcEEEEECCHHHHHHHHHHHHHH
Confidence 99999999999999999864 3569999999999999987 64 556799 99999999998899998 8999
Q ss_pred HHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHH
Q 001059 843 TMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVV 922 (1170)
Q Consensus 843 a~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 922 (1170)
+.++++.||+. +.+.+++. .++.
T Consensus 178 ~~~~~~~LGl~--~~~~~~~~--------------------------~ek~----------------------------- 200 (459)
T 1nj8_A 178 YKKFFDTLGIP--YLISKRPE--------------------------WDKF----------------------------- 200 (459)
T ss_dssp HHHHHHHHTCC--CEEEEECT--------------------------TSCC-----------------------------
T ss_pred HHHHHHHCCCc--eEEeecCc--------------------------hhhc-----------------------------
Confidence 99999999995 77776641 0100
Q ss_pred HHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccc
Q 001059 923 NRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATL 1002 (1170)
Q Consensus 923 ~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~ 1002 (1170)
.|.. ....++..+.-|..++.|++|+. +
T Consensus 201 ----------~ga~--------------------------------~~~~ie~~~~dg~~~e~gt~~~l---g------- 228 (459)
T 1nj8_A 201 ----------PGAE--------------------------------YTMAFDTIFPDGRTMQIATVHNL---G------- 228 (459)
T ss_dssp ----------TTCS--------------------------------EEEEEEEECTTSCEEEEEEEEEE---E-------
T ss_pred ----------CCcc--------------------------------cceeEEEEcCCCcEEEEEEEeec---c-------
Confidence 0100 00112222223677889999864 1
Q ss_pred cccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhcc-C-----CCCCCCCCCCceEEEEEc-CCC
Q 001059 1003 VEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP-V-----DFKPVRNEAGTSVLVCSR-GGG 1075 (1170)
Q Consensus 1003 ~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~-~-----~~~~~~~~~~~~vlv~~~-~~~ 1075 (1170)
...+.+.|+||++.- | ....++++||++| +|++.+|. . +...+...+|.+|+|+++ +.+
T Consensus 229 -~~~s~~~~~~Y~~~~---G---------~~~~v~~~~~Gig-eRli~alie~~~d~~gl~~P~~laP~qv~Iipi~~~~ 294 (459)
T 1nj8_A 229 -QNFSKTFEIIFETPT---G---------DKDYAYQTCYGIS-DRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKG 294 (459)
T ss_dssp -THHHHHTTCEEECTT---S---------SEEECEEEEEEEC-THHHHHHHHHHCBTTBCCCCTTSCSSSEEEEECCCSS
T ss_pred -cccccccCeEEECCC---C---------CEeeeeEeeccHH-HHHHHHHHHHhCCCceeEcCCcCCCCcEEEEecccCC
Confidence 123688999998741 2 1123578999999 99998874 2 122333457889999998 522
Q ss_pred ---ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHH
Q 001059 1076 ---GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLV 1152 (1170)
Q Consensus 1076 ---~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~ 1152 (1170)
....+|.++++.||+. ++|++++. ++++++++++|++.|+|++|+||++|+++|+|+||++++++|..|++++++
T Consensus 295 ~~~~~~~~a~~l~~~Lr~~-i~v~~D~~-~~~~g~k~~~a~~~G~p~~iiiG~~el~~~~V~vr~r~t~eq~~v~~~el~ 372 (459)
T 1nj8_A 295 KEDIVMEKAKEIYEKLKGK-FRVHIDDR-DIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLM 372 (459)
T ss_dssp CHHHHHHHHHHHHHHHHTT-SCEEECCS-CSCHHHHHHHHHHTTCSEEEEECHHHHHTTEEEEEETTTCCEEEEETTSHH
T ss_pred cHHHHHHHHHHHHHHHhhh-cEEEEECC-CCCHHHHHHHHHHcCCCEEEEECcchhcCCEEEEEECCCCceEEEeHHHHH
Confidence 5788999999999999 99998876 679999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhccC
Q 001059 1153 RFLLDAIASQFRN 1165 (1170)
Q Consensus 1153 ~~l~~~l~~~~~~ 1165 (1170)
+.|.+.++..+++
T Consensus 373 ~~l~~~l~~~~~~ 385 (459)
T 1nj8_A 373 EVVEKTLNNIMEN 385 (459)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9998887665543
|
| >3a32_A Probable threonyl-tRNA synthetase 1; aeropyrum pernix K1, protein biosynthesis, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; 2.30A {Aeropyrum pernix} PDB: 3a31_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-37 Score=368.95 Aligned_cols=367 Identities=12% Similarity=0.096 Sum_probs=263.2
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
.+.|++||+|.++.+++.|++.++++|.++||++|.||+| ++.. +.+.+.++||+| |++|+.++||||.|+++
T Consensus 37 ~~~G~~d~lP~g~~~~~~i~~~~~~~~~~~G~~ei~tP~l~~~~l~~~sg~~~~~~~emy~~-d~~~~~l~LRP~~t~~i 115 (471)
T 3a32_A 37 TGAGVPLFSLGGGPIRYALAEVLAKFHARRGYYVVETPIIASTELFKVSGHIEFYRNNMYLF-DIEGHEFAVKPMNCPYH 115 (471)
T ss_dssp HCTTCCCBCTTHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHTCCCTTGGGGSEEE-EETTEEEEECSCSHHHH
T ss_pred cCCEEEEECchHHHHHHHHHHHHHHHHHHcCCEEEECCeeeehHHhhhccCccccccceEEE-ecCCcEEEEccccHHHH
Confidence 5799999999999999999999999999999999999999 3322 345678999999 99999999999999999
Q ss_pred HHHHHhC----C---CCceeEEEecCeEEcCCCC--C---CCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHH-cCC
Q 001059 788 IRWAISN----Q---KSSFKRYEISSVYRRAIGH--S---PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTR-FFH 852 (1170)
Q Consensus 788 aR~~~~~----~---~~P~r~~Y~g~VfR~e~~~--~---~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~-lgi 852 (1170)
+|+++.+ + ..|+|+||+|+|||+|+++ . |.|||+|+|+|+||.++..+| +|+|.++.++|+. ||+
T Consensus 116 ~~~~~~~~~s~r~~~~lP~rl~~~g~vfR~E~~~~~~Gl~R~REF~Q~~~e~f~~~~~~~de~~e~i~~~~~~l~~~lGl 195 (471)
T 3a32_A 116 ILLFLNEVAKHRSKLPLPFKVFEFGRVHRYEPSGSIYGLLRVRGFTQDDAHIIVPGGRVIDVVYDVFEEMKLVLERLFKL 195 (471)
T ss_dssp HHHHHHHHHHHGGGSCSSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEEEGGGHHHHHHHHHHHHHHHHHHTSCC
T ss_pred HHHHHhhhhhccccccCCeEEeeccceeccCCCcccccceeEEEEEECCeEEEcChHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 9988764 3 6799999999999998766 3 567799999999999999999 9999999999999 999
Q ss_pred ----CcceEEEeCcHH--HH-HHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHH
Q 001059 853 ----AESCDIHLNHGD--LL-EAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 925 (1170)
Q Consensus 853 ----~~~~~i~lg~~~--il-~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 925 (1170)
.+ +.|.+||+. ++ +.+ +|....+.+ ....+ .+.+ +..+...++.....+.+
T Consensus 196 ~~~~~~-~~l~i~~~~~~~~~e~~---~g~~~~~d~-~~~~l----------------~~~~-~~~l~~~~~~~~~~~~~ 253 (471)
T 3a32_A 196 GVSSET-FKVRLSMSDKSLIGKEF---MGSKEEWEG-AEEAL----------------REAA-SRINEKYGIDIVELEGE 253 (471)
T ss_dssp CCSTTT-EEEEEECCCGGGBTTTB---CSCHHHHHH-HHHHH----------------HHHH-HHHHHHHCCEEEEETTC
T ss_pred CcCCCC-eEEEEecCCCCcccccc---cCCHHHHHH-HHHHH----------------HHHH-HHHHHhcCCceEecccc
Confidence 64 999999973 11 111 122211110 00000 0011 11111122211000000
Q ss_pred HHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCC--ccc----ceEEEEEeccCCCc
Q 001059 926 QTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIES--YHR----NLFFQVFSVKEKYP 999 (1170)
Q Consensus 926 ~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgld--YYt----G~VFe~~~~~~~~~ 999 (1170)
..+ .|+. +...+..+. .++.++ ...| .+.+|++++|+++ ||| |++ +.+..+ .
T Consensus 254 ~~~----~gp~------i~~~l~d~~---~~l~~~--~~~g---~~~lD~~l~r~~d~~Yyt~~~~G~~-e~~~i~--~- 311 (471)
T 3a32_A 254 AAF----YGPK------LDFIMMVEE---SGVSKE--WQMG---TIQFDFNLPRRFRLYDVVREEFGIE-EVYIIH--R- 311 (471)
T ss_dssp SBT----TBCE------EEEEEEEES---SSCEEE--EEEE---EEEEESSHHHHTTHHHHHHHHHCCS-CEEEEE--E-
T ss_pred hhh----CCCc------cceEEeccH---Hhhhhh--heee---eEEecccccccCCceEeccccCCce-eeEEEe--c-
Confidence 000 0110 000000000 000000 0112 5899999999999 999 998 664311 0
Q ss_pred ccccccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHh-hccC-CCCCCCCCCCceEEEEEcCC---
Q 001059 1000 ATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ-HYPV-DFKPVRNEAGTSVLVCSRGG--- 1074 (1170)
Q Consensus 1000 ~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~-~L~~-~~~~~~~~~~~~vlv~~~~~--- 1074 (1170)
...| |+|||+. +++. +...+...+|.+|+|++.+.
T Consensus 312 -------------------------------------~i~G---gieRli~~lie~~~g~~p~~~ap~qv~Iip~~~~~~ 351 (471)
T 3a32_A 312 -------------------------------------ALLG---SIERFLGVYLEHRRGRMPFTLAPIQFAVIAVKTGGE 351 (471)
T ss_dssp -------------------------------------EEEE---EHHHHHHHHHHHTTTCCCGGGCSCSEEEEEEECSST
T ss_pred -------------------------------------cccC---cHHHHHHHHHHHhCCCCCCCcCCceEEEEEccCccc
Confidence 1222 7899985 4453 22222224678899998852
Q ss_pred --CccHHHHHHHHHHHHHcCCeEEEee-CCCCCHHHHHHHHH-hCCCcEEEEEcCCcccCCeEEEEEcCCCc--ccccch
Q 001059 1075 --GGLLVERMELVAELWEENIKAQFVP-VPDPSLTEQYEYAS-EHDIKCLVILTDTGAQKGLVKVRHLDVKK--EKEVQR 1148 (1170)
Q Consensus 1075 --~~~~~~a~~ia~~LR~~Gi~v~~~~-~~~~~l~k~~~~A~-~~gi~~~iiig~~e~~~~~v~vk~l~~~e--q~~v~~ 1148 (1170)
+....+|.++++.||+.|++|+++. . +.++++++++|+ +.|+|++|+||++|+++|+|+||++++++ +..|++
T Consensus 352 ~~~~~~~~a~~i~~~Lr~~Gi~v~~D~~~-~~~~g~k~~~a~~~~gip~~iiiG~~e~~~~~V~vr~r~~~~q~~~~v~~ 430 (471)
T 3a32_A 352 VDREIEDLASSIAKGLLDKGFRVAVKGSS-KTGLSSDVRHIESTAKPAVNVFIGAKEVREKVLDVRVFDLESMKRRRLAI 430 (471)
T ss_dssp THHHHHHHHHHHHHHHHHTTCEEEEEEEE-TTTHHHHHHHHHHTTCCSEEEEECHHHHHHTEEEEEEEETTTTEEEEEEE
T ss_pred ccHHHHHHHHHHHHHHHHCCCEEEEecCC-CCCHHHHHHHHHHhcCCCEEEEECchhhhCCEEEEEECCCCccceEEEee
Confidence 3467899999999999999999888 5 568999999999 99999999999999999999999999998 688888
Q ss_pred H-----HHHHHHHHHHHhhccCC
Q 001059 1149 E-----SLVRFLLDAIASQFRNP 1166 (1170)
Q Consensus 1149 ~-----~l~~~l~~~l~~~~~~~ 1166 (1170)
+ ++++.|.++|....+|+
T Consensus 431 ~~~~~~~~~~~~~~~~~~~~~~~ 453 (471)
T 3a32_A 431 AYGDAADAVENLAAVAEELESPV 453 (471)
T ss_dssp ECSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccchhHHHHHHHHHHHHHHHHH
Confidence 8 88888888887666553
|
| >2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.3e-36 Score=337.49 Aligned_cols=246 Identities=23% Similarity=0.337 Sum_probs=190.9
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCC--CChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD--KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDS 435 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~--~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~ 435 (1170)
...+.||+|+||.||+|.+ +++.||||++.... ......+.+.+|+.+++.++||||+++++++.+
T Consensus 34 ~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~---------- 101 (307)
T 2nru_A 34 VGGNKMGEGGFGVVYKGYV--NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSD---------- 101 (307)
T ss_dssp TTCCEEEECSSEEEEEEES--SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECS----------
T ss_pred ccCCccccCCCeEEEEEEE--CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEec----------
Confidence 3457899999999999986 58999999986532 223456789999999999999999999998732
Q ss_pred CCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 436 MWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES---YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 436 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~---~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|++|||++ ++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 102 ------------------------------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~ 151 (307)
T 2nru_A 102 ------------------------------GDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHE 151 (307)
T ss_dssp ------------------------------SSSCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------CCceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 345699999996 699998864 3459999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+++...... .........||+.|+|||++.+ .++.++|
T Consensus 152 ~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~-------------~~~~~~~~~g~~~y~aPE~~~~--~~~~~~D 216 (307)
T 2nru_A 152 NHHIHRDIKSANILLDEAFTAKISDFGLARASEKFA-------------QTVMTSRIVGTTAYMAPEALRG--EITPKSD 216 (307)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCS-------------SCEECSSCCSCGGGCCHHHHTT--EECTHHH
T ss_pred CCeecCCCCHHHEEEcCCCcEEEeeccccccccccc-------------ccccccccCCCcCcCChHHhcC--CCCccch
Confidence 999999999999999999999999999998643211 0011234579999999999876 4799999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHH---HHHHHhhh---------cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQ---IVLSDLKQ---------KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE 656 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~---~~~~~l~~---------~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e 656 (1170)
||||||++|+|++ ||....... ........ ...++......++.+.++|.+||+.||.+|||+.+
T Consensus 217 v~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ 296 (307)
T 2nru_A 217 IYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKK 296 (307)
T ss_dssp HHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHHSCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred hHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhhccccccccchHHHHHHHHHHHHHcCCCcccCcCHHH
Confidence 9999999999997 665432211 01111100 01122222333457889999999999999999999
Q ss_pred HHhc
Q 001059 657 LLQD 660 (1170)
Q Consensus 657 iL~~ 660 (1170)
++++
T Consensus 297 l~~~ 300 (307)
T 2nru_A 297 VQQL 300 (307)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9975
|
| >3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-35 Score=355.95 Aligned_cols=255 Identities=22% Similarity=0.270 Sum_probs=198.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++.++||+|+||.||+|++..+|+.||||++...... ..+.+|+.+++.++|++++..+..|..
T Consensus 5 i~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~il~~L~~~~~i~~i~~~~~------- 73 (483)
T 3sv0_A 5 VGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH----PQLLYESKIYRILQGGTGIPNVRWFGV------- 73 (483)
T ss_dssp ETTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS----CCHHHHHHHHHHTTTSTTCCCEEEEEE-------
T ss_pred cCCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc----HHHHHHHHHHHHhcCCCCCCeEEEEEe-------
Confidence 457899999999999999999999999999999998755432 347889999999988655554444321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.....|+|||||+++|.+++.. ...+++..++.++.||+.||+|||+
T Consensus 74 --------------------------------~~~~~~lvme~~g~sL~~ll~~~~~~l~~~~~~~i~~qi~~aL~yLH~ 121 (483)
T 3sv0_A 74 --------------------------------EGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHS 121 (483)
T ss_dssp --------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------eCCEEEEEEECCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2457799999998899999975 4579999999999999999999999
Q ss_pred CCccccCCCCCceee---cCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 512 QGIIHRDLTPNNIFF---DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi---~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
+||+||||||+|||| +.++.+||+|||+++.+......... ........+||+.|+|||++.+ ..++.
T Consensus 122 ~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~--------~~~~~~~~~gt~~Y~aPE~~~~-~~~s~ 192 (483)
T 3sv0_A 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHI--------PYRENKNLTGTARYASVNTHLG-IEQSR 192 (483)
T ss_dssp TTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBC--------CCCCCCCCCSCTTTCCHHHHTT-CCCCH
T ss_pred CCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCcccccc--------ccccccccCCCccccCHHHhcC-CCCCh
Confidence 999999999999999 57899999999999876432211100 0112245689999999999988 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhH---HHHHHHHhhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 589 KADMYSLGIVFFELWH---PFSTAME---RQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~---~~~~~~~l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++|||||||+||||++ ||..... .+....+... ...+......+++++.+||.+||+.||.+||++.+|++
T Consensus 193 ~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~ 271 (483)
T 3sv0_A 193 RDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR 271 (483)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence 9999999999999997 7764321 1211111111 11111222456779999999999999999999999976
|
| >3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.4e-36 Score=346.86 Aligned_cols=241 Identities=14% Similarity=0.172 Sum_probs=187.0
Q ss_pred cCCceEEeeeccCCcEEEEEE-----EEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc---CCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLC-----KNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ---HQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka-----~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~---HpnIV~l~~~~~e 425 (1170)
.++|.+.+.||+|+||+||+| .+..+++.||||+++.. ....+.+|+.+++.++ |+||+++++++..
T Consensus 64 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~-----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 64 SKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA-----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC-----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC-----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 467999999999999999999 46778999999998632 2346778888888886 9999999998843
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-----cCCCCHHHHHHHH
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-----YDHFDKELAWHLF 499 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-----~~~l~e~~~~~i~ 499 (1170)
....|+|||||+ |+|.+++.. ...+++..++.++
T Consensus 139 ----------------------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~ 178 (365)
T 3e7e_A 139 ----------------------------------------QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFA 178 (365)
T ss_dssp ----------------------------------------SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHH
T ss_pred ----------------------------------------CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHH
Confidence 345799999996 699999974 4569999999999
Q ss_pred HHHHHHHHHHHhCCccccCCCCCceeecC-----------CCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 500 RQIVEGLAHIHGQGIIHRDLTPNNIFFDA-----------RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 500 ~qI~~gL~yLHs~gIiHrDLKp~NILi~~-----------~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.||+.||+|||++||+||||||+|||++. ++.+||+|||+|+.+..... ....+..
T Consensus 179 ~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG~a~~~~~~~~-------------~~~~~~~ 245 (365)
T 3e7e_A 179 MRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLGQSIDMKLFPK-------------GTIFTAK 245 (365)
T ss_dssp HHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCTTCEEGGGSCT-------------TEEECCS
T ss_pred HHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCchhhhhhccCC-------------Cceeeee
Confidence 99999999999999999999999999998 89999999999975431110 0112456
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccC
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
+||+.|||||++.+ ..|+.++|||||||++|||++ ||....... ......+... ...+.+.+++..||+
T Consensus 246 ~gt~~y~aPE~~~~-~~~~~~~DiwslG~il~elltg~~pf~~~~~~~-----~~~~~~~~~~--~~~~~~~~~~~~~l~ 317 (365)
T 3e7e_A 246 CETSGFQCVEMLSN-KPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGE-----CKPEGLFRRL--PHLDMWNEFFHVMLN 317 (365)
T ss_dssp SCTTSCCCHHHHTT-CCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTE-----EEECSCCTTC--SSHHHHHHHHHHHHC
T ss_pred cCCCCCCChHHhcC-CCCCccccHHHHHHHHHHHHhCCCccccCCCCc-----eeechhcccc--CcHHHHHHHHHHHcC
Confidence 89999999999998 558999999999999999997 665433211 0001111111 224577899999999
Q ss_pred CCCCCCCCHHHHHhc
Q 001059 646 PSPSDRPSATELLQD 660 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~ 660 (1170)
.+|.+|++..+.+.+
T Consensus 318 ~~p~~r~~~~~~l~~ 332 (365)
T 3e7e_A 318 IPDCHHLPSLDLLRQ 332 (365)
T ss_dssp CCCTTCCCCHHHHHH
T ss_pred CCCCCcchHHHHHHH
Confidence 999999655444443
|
| >3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.6e-35 Score=331.35 Aligned_cols=240 Identities=27% Similarity=0.408 Sum_probs=189.6
Q ss_pred CCCCccccCCceEE-eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHH-HhccCCCceeEEEEEe
Q 001059 347 SLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL-SRLQHQHVVRYYQAWF 424 (1170)
Q Consensus 347 ~~~~~~~~~~y~~~-~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL-~~l~HpnIV~l~~~~~ 424 (1170)
.+..+...++|.+. +.||+|+||.||+|.++.+|+.||||+++. ...+.+|+.++ +.++||||++++++|.
T Consensus 9 ~~~~~~~~~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~-------~~~~~~e~~~~~~~~~h~~i~~~~~~~~ 81 (299)
T 3m2w_A 9 QIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYE 81 (299)
T ss_dssp CCBCSCGGGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEE
T ss_pred cCcccccccchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc-------cHHHHHHHHHHHHhccCCCchhHHhhhh
Confidence 34456778999998 779999999999999999999999999863 24577899888 5569999999999874
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcC--CCCHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYD--HFDKELAWHLFRQ 501 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~--~l~e~~~~~i~~q 501 (1170)
.. ......+|+|||||++ +|.+++.... .+++..++.++.|
T Consensus 82 ~~------------------------------------~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~q 125 (299)
T 3m2w_A 82 NL------------------------------------YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKS 125 (299)
T ss_dssp EE------------------------------------ETTEEEEEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHH
T ss_pred hh------------------------------------cCCCceEEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHH
Confidence 31 0124678999999974 9999998754 6999999999999
Q ss_pred HHHHHHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 502 IVEGLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 502 I~~gL~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
|+.||+|||++||+||||||+|||++. ++.+||+|||++....
T Consensus 126 i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~---------------------------------- 171 (299)
T 3m2w_A 126 IGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT---------------------------------- 171 (299)
T ss_dssp HHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT----------------------------------
T ss_pred HHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc----------------------------------
Confidence 999999999999999999999999998 7889999999986421
Q ss_pred cccCCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhh----hcCCCC-CccccCCHHHHHHHHHccCCCCCC
Q 001059 579 IEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLK----QKGELP-PSWVAKFSEQESLLRRLMSPSPSD 650 (1170)
Q Consensus 579 ~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~----~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~ 650 (1170)
+ ..++.++|||||||++|||++ ||.............. .....+ +.+...++++.+||.+||+.||.+
T Consensus 172 ---~-~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~ 247 (299)
T 3m2w_A 172 ---G-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQ 247 (299)
T ss_dssp ---T-CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTT
T ss_pred ---c-ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccCCHHHHHHHHHHcccChhh
Confidence 0 236789999999999999997 7765443322111110 011111 123457789999999999999999
Q ss_pred CCCHHHHHhccCCCCch
Q 001059 651 RPSATELLQDALPPQME 667 (1170)
Q Consensus 651 RPta~eiL~~~~~~~~~ 667 (1170)
|||+.++++|||+.+..
T Consensus 248 Rps~~e~l~hp~~~~~~ 264 (299)
T 3m2w_A 248 RMTITEFMNHPWIMQST 264 (299)
T ss_dssp SCCHHHHHTSHHHHTGG
T ss_pred CCCHHHHhcChhhcccc
Confidence 99999999999987653
|
| >2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-35 Score=367.73 Aligned_cols=248 Identities=23% Similarity=0.339 Sum_probs=200.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC---CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t---g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||+||+|.+..+ +..||||+++.. ......+.+.+|+.+|+.++||||+++++++.+
T Consensus 389 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~~----- 462 (656)
T 2j0j_A 389 RERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVITE----- 462 (656)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSST-TCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS-----
T ss_pred cccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEec-----
Confidence 46899999999999999999999754 457999988643 334455789999999999999999999988721
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
..+|+|||||+ |+|.+++.... .+++..++.++.||+.||+|
T Consensus 463 ------------------------------------~~~~lv~E~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~~ 506 (656)
T 2j0j_A 463 ------------------------------------NPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAY 506 (656)
T ss_dssp ------------------------------------SSCEEEEECCTTCBHHHHHHHTTTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CceEEEEEcCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHH
Confidence 23689999997 69999997654 69999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++.+||+|||+++...... ........||+.|+|||++.+ ..++.
T Consensus 507 LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~--------------~~~~~~~~~t~~y~aPE~~~~-~~~~~ 571 (656)
T 2j0j_A 507 LESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDST--------------YYKASKGKLPIKWMAPESINF-RRFTS 571 (656)
T ss_dssp HHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC------------------------CCGGGCCHHHHHH-CCCCH
T ss_pred HHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCc--------------ceeccCCCCCcceeCHHHhcC-CCCCc
Confidence 999999999999999999999999999999998653221 011233467889999999987 57899
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ ||......+....+.. +..++....+++.+.+||.+||+.||.+|||+.++++.
T Consensus 572 ~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~ 645 (656)
T 2j0j_A 572 ASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIEN--GERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 645 (656)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHH--TCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHc--CCCCCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence 9999999999999985 7776655554443332 23333345677899999999999999999999999864
|
| >1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-35 Score=336.06 Aligned_cols=254 Identities=23% Similarity=0.331 Sum_probs=194.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHh--ccCCCceeEEEEEeecCcc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSR--LQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~--l~HpnIV~l~~~~~e~~~~ 429 (1170)
...++|++.+.||+|+||+||+|.+ +|+.||||+++.. ....+.+|+.+++. ++||||+++++++....
T Consensus 39 ~~~~~y~~~~~lg~G~~g~Vy~~~~--~~~~vavK~~~~~-----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~-- 109 (342)
T 1b6c_B 39 TIARTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSR-----EERSWFREAEIYQTVMLRHENILGFIAADNKDN-- 109 (342)
T ss_dssp HHHHHCEEEEEEEEETTEEEEEEEE--TTEEEEEEEECGG-----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCC--
T ss_pred cccccEEEEeeecCCCCcEEEEEEE--cCccEEEEEeCch-----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccC--
Confidence 3457899999999999999999998 4999999998632 34567889999988 79999999999874421
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
.....+|+|||||++ +|.+++.. ..+++..++.++.||+.||+|
T Consensus 110 ----------------------------------~~~~~~~lv~e~~~~g~L~~~l~~-~~~~~~~~~~i~~~i~~~l~~ 154 (342)
T 1b6c_B 110 ----------------------------------GTWTQLWLVSDYHEHGSLFDYLNR-YTVTVEGMIKLALSTASGLAH 154 (342)
T ss_dssp ----------------------------------SSCCCEEEEECCCTTCBHHHHHHH-CCBCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CccceeEEEEeecCCCcHHHHHhc-cCccHHHHHHHHHHHHHHHHH
Confidence 112368999999975 99999975 469999999999999999999
Q ss_pred HH--------hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccc
Q 001059 509 IH--------GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIE 580 (1170)
Q Consensus 509 LH--------s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l 580 (1170)
|| ++||+||||||+|||++.++.+||+|||+++........ .........||+.|+|||++
T Consensus 155 lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~ 223 (342)
T 1b6c_B 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVL 223 (342)
T ss_dssp HHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTE-----------EEECCCSCCCCGGGCCHHHH
T ss_pred HHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccc-----------cccccccCCcCcccCCHhhh
Confidence 99 899999999999999999999999999999865422100 01112445799999999999
Q ss_pred cCCCC-----CCccchhHHHHHHHHHhhc-------------CCCchh----HHHHHHHHhhhcCC---CCCcc--ccCC
Q 001059 581 QGWPK-----IDEKADMYSLGIVFFELWH-------------PFSTAM----ERQIVLSDLKQKGE---LPPSW--VAKF 633 (1170)
Q Consensus 581 ~~~~~-----~~~ksDIwSlGviL~ELlt-------------Pf~~~~----~~~~~~~~l~~~~~---~p~~~--~~~~ 633 (1170)
.+... ++.++|||||||++|||++ ||.... ........+..... ++..+ ...+
T Consensus 224 ~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (342)
T 1b6c_B 224 DDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEAL 303 (342)
T ss_dssp TSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHH
T ss_pred cccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHH
Confidence 87422 2368999999999999985 443321 11222222222221 22221 1233
Q ss_pred HHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 634 SEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 634 ~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+.+.+||.+||+.||.+|||+.+++++
T Consensus 304 ~~l~~li~~cl~~dp~~Rps~~~i~~~ 330 (342)
T 1b6c_B 304 RVMAKIMRECWYANGAARLTALRIKKT 330 (342)
T ss_dssp HHHHHHHHHHCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHHhccChhhCCCHHHHHHH
Confidence 578899999999999999999999986
|
| >1nyr_A Threonyl-tRNA synthetase 1; ATP, threonine, ligase; HET: ATP; 2.80A {Staphylococcus aureus} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 PDB: 1nyq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-36 Score=375.09 Aligned_cols=354 Identities=12% Similarity=0.059 Sum_probs=255.7
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccCC-ceeeecCCCCHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHGG-DLLELSHELRLPF 787 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~G-~~laLRPD~T~~i 787 (1170)
+.|++||+|.++.+++.|++.+++.|.++||++|.||+| ++. ++++.+.++||+|.|.+| +.++|||+.|+++
T Consensus 260 ~~G~~~~lP~g~~~~~~l~~~ir~~~~~~Gy~eV~tP~l~~~~l~~~sG~~d~~~~~mf~~~d~~~~~~~~LrP~~~~~~ 339 (645)
T 1nyr_A 260 GAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHH 339 (645)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHTTEEECBCCSEEETHHHHHHTHHHHCTTSSCCCEEETTTEEEEECSSSHHHH
T ss_pred CCceeEECCCHHHHHHHHHHHHHHHHHHcCCEEEECCeeccHHHHhhCCCccccccCcceeEecCCCeEEEeCCCCCHHH
Confidence 789999999999999999999999999999999999999 222 224567899999999999 9999999999999
Q ss_pred HHHHHhCC----CCceeEEEecCeEEcCCCC---C--CCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcce
Q 001059 788 IRWAISNQ----KSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~~~----~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~~ 856 (1170)
+|+++++. ..|+|+||+|+|||+|+++ + |.|||+|+|+|+||.+++.+| +|+|.++.++|+.||+++ +
T Consensus 340 ~~~~~~~~~syr~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~Q~d~~~f~~~~~~~d~~~e~i~~~~~~l~~lGl~~-~ 418 (645)
T 1nyr_A 340 MMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFED-Y 418 (645)
T ss_dssp HHHHHTSCCBGGGCCEEEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTCCC-E
T ss_pred HHHHHhhhhhccCCCeEEEEeccEEecCCCccccCcceeeeEEEccEEEEcCHHHHHHHHHHHHHHHHHHHHHcCCCe-E
Confidence 99998753 4699999999999999886 2 667899999999999999999 999999999999999975 9
Q ss_pred EEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCCh
Q 001059 857 DIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAA 936 (1170)
Q Consensus 857 ~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~ 936 (1170)
.+.+|++... ..-..+|..+.| +.. ...+..
T Consensus 419 ~~~l~~~~~~-~~e~~~g~~e~~-------------------------~~~--------------~~~l~~--------- 449 (645)
T 1nyr_A 419 SFRLSYRDPE-DKEKYFDDDDMW-------------------------NKA--------------ENMLKE--------- 449 (645)
T ss_dssp EEEEEECCCC-CSSSSSCCHHHH-------------------------HHH--------------HHHHHH---------
T ss_pred EEEEeCCCcc-cchhhcCChHHH-------------------------HHH--------------HHHHHH---------
Confidence 9999985310 000011111000 000 000000
Q ss_pred hhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccccccee----cccc
Q 001059 937 DQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL----AVGG 1012 (1170)
Q Consensus 937 ~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I----~~GG 1012 (1170)
.+...|+. ...+.+. +..|+..+.|++. ...+.. .+.+++ ..++
T Consensus 450 ------------------------~l~~~g~~--~~~~~~~--~~~ygpki~~~~~-d~lg~~---~~~gtiq~D~~l~~ 497 (645)
T 1nyr_A 450 ------------------------AADELGLS--YEEAIGE--AAFYGPKLDVQVK-TAMGKE---ETLSTAQLDFLLPE 497 (645)
T ss_dssp ------------------------HHHHHCCC--CCCEESC--SBTTBCEEEEEEC-CTTSCC---EEEEEEEEESSHHH
T ss_pred ------------------------HHHHcCCC--eEecCCC--CceeCCccceehh-hhhCch---hhcceEEeeccccc
Confidence 11111221 1111111 2223333333221 101100 000000 1134
Q ss_pred ccc-hhhhhcccccccccCCCCCCCCce---EEeccHHHHHhhcc-C-CCCCCCCCCCceEEEEEcCCCccHHHHHHHHH
Q 001059 1013 RYD-YLLHRMWDREYVGYASRTNPPSGV---GASLALETIIQHYP-V-DFKPVRNEAGTSVLVCSRGGGGLLVERMELVA 1086 (1170)
Q Consensus 1013 RYD-~L~~~fg~~~~~~~~g~~~~~pAv---GfaiglerL~~~L~-~-~~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~ 1086 (1170)
||| .. ++..|. ...|++ |++.|+||++.+|. . ....+...+|.+|+|++.+.+....+|.++++
T Consensus 498 ~~d~~Y---------~~~~g~-~~~P~~ih~~~~GgieR~i~~liE~~~~~~P~~lap~qv~vip~~~~~~~~~a~~i~~ 567 (645)
T 1nyr_A 498 RFDLTY---------IGQDGE-HHRPVVIHRGVVSTMERFVAFLTEETKGAFPTWLAPKQVQIIPVNVDLHYDYARQLQD 567 (645)
T ss_dssp HTTCCE---------ECTTSC-EECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESSHHHHHHHHHHHHH
T ss_pred ccceEE---------ECCCCC-ccCcEEEEeccCCcHHHHHHHHHHHhcCCCCCCCCCceEEEEEcccHHHHHHHHHHHH
Confidence 444 12 112221 235888 88889999997663 2 22222224678999999841457889999999
Q ss_pred HHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1087 ELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1087 ~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
.||+.|++|+++.. +.++++++++|++.|+|++|++|++|+++|+|+||++++++|..++++++++.|.+.+++
T Consensus 568 ~Lr~~Gi~v~~D~~-~~~~g~k~~~a~~~g~p~~iivG~~e~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~ 641 (645)
T 1nyr_A 568 ELKSQGVRVSIDDR-NEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYGSQDQETVEKDEFIWNLVDEIRL 641 (645)
T ss_dssp HHHTTTCCEEECCS-SCCHHHHHHHHHHHTCSEEEEECHHHHHTTEEEEEETTSSCCCEEEHHHHHHHHHHHHHT
T ss_pred HHHhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEEccchhhCCEEEEEECCCCcEEEEEHHHHHHHHHHHHhh
Confidence 99999999998876 679999999999999999999999999999999999999999999999999999887764
|
| >2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-36 Score=347.57 Aligned_cols=269 Identities=18% Similarity=0.209 Sum_probs=191.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC------ChhhHHHHHHHHHHHHhcc---------CCCcee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK------SLPVNDRILREVATLSRLQ---------HQHVVR 418 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~------~~~~~~~~~~Ev~iL~~l~---------HpnIV~ 418 (1170)
.++|++.+.||+|+||+||+|++ +|+.||||+++.... .....+.+.+|+.+|+.++ |||||+
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~--~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~ 96 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA--DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIG 96 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE--TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCC
T ss_pred cccchheeeecccCceEEEEEEe--CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhh
Confidence 47899999999999999999998 689999999986542 2223467899999999986 999999
Q ss_pred EEEEEeecCccccCCCCCCCCCcccc--cccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHH
Q 001059 419 YYQAWFETGVADFDGDSMWGSGTLAS--STFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELA 495 (1170)
Q Consensus 419 l~~~~~e~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~ 495 (1170)
+++++...+.. ...+.. ..|...... ............+|+|||||+ |++.+.+.. ..+++..+
T Consensus 97 l~~~~~~~~~~---------hp~iv~~~~~~~~~~~~---~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~-~~~~~~~~ 163 (336)
T 2vuw_A 97 LNSVHCVQGSY---------PPLLLKAWDHYNSTKGS---ANDRPDFFKDDQLFIVLEFEFGGIDLEQMRT-KLSSLATA 163 (336)
T ss_dssp EEEEEEEESSC---------CHHHHHHHHHHHHHTCC---SSCCSCCCCTTCEEEEEEEECCCEETGGGTT-TCCCHHHH
T ss_pred hcceeEecCCC---------cHHHHHHHHHHhhhccc---cccCccccccCeEEEEEEecCCCccHHHHHh-cCCCHHHH
Confidence 98876532100 000000 000000000 000000112568999999996 455555543 56899999
Q ss_pred HHHHHHHHHHHHHHH-hCCccccCCCCCceeecCCC--------------------CEEEeecCcchhccccccccCCCC
Q 001059 496 WHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARN--------------------DIKIGDFGLAKFLKLEQLDQDAAF 554 (1170)
Q Consensus 496 ~~i~~qI~~gL~yLH-s~gIiHrDLKp~NILi~~~~--------------------~vKL~DFGlA~~~~~~~~~~~~~~ 554 (1170)
+.++.||+.||+||| ++||+||||||+|||++.++ .+||+|||+|+....
T Consensus 164 ~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~--------- 234 (336)
T 2vuw_A 164 KSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERD--------- 234 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEET---------
T ss_pred HHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCC---------
Confidence 999999999999999 99999999999999999887 899999999986531
Q ss_pred CCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHH-HHHhhcCCCchhHH---HHHHHHhhh----cCC-C
Q 001059 555 PTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV-FFELWHPFSTAMER---QIVLSDLKQ----KGE-L 625 (1170)
Q Consensus 555 ~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGvi-L~ELltPf~~~~~~---~~~~~~l~~----~~~-~ 625 (1170)
...+||+.|||||++.+. .+.++||||+|++ .+++++.+.+.... ......+.. ... .
T Consensus 235 -----------~~~~gt~~y~aPE~~~g~--~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (336)
T 2vuw_A 235 -----------GIVVFCDVSMDEDLFTGD--GDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYLTDKMLKQMTFKTKCN 301 (336)
T ss_dssp -----------TEEECCCCTTCSGGGCCC--SSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHHHHHHHHTCCCSSCCC
T ss_pred -----------CcEEEeecccChhhhcCC--CccceehhhhhCCCCcccccccCCCcchhhhhHHHHhhhhhhccCcccc
Confidence 234899999999999974 3889999998877 66676533332221 112212111 111 2
Q ss_pred CCccccCCHHHHHHHHHccCCCCCCCCCHHHHH-hccCCC
Q 001059 626 PPSWVAKFSEQESLLRRLMSPSPSDRPSATELL-QDALPP 664 (1170)
Q Consensus 626 p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL-~~~~~~ 664 (1170)
++.+...++++.+||++||+.| |+.++| +||||+
T Consensus 302 ~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~ 336 (336)
T 2vuw_A 302 TPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK 336 (336)
T ss_dssp SHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred hhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence 2234456778999999999977 999999 999984
|
| >1qf6_A THRRS, threonyl-tRNA synthetase; tRNA(Thr), AMP, mRNA, aminoacylati translational regulation, protein/RNA, ligase-RNA complex; HET: H2U AET G7M 5MU PSU AMP; 2.90A {Escherichia coli} SCOP: c.51.1.1 d.15.10.1 d.67.1.1 d.104.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-34 Score=357.14 Aligned_cols=355 Identities=12% Similarity=0.036 Sum_probs=262.7
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLP 786 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ 786 (1170)
+.+.|+.||+|.++.+++.|++.+++.|.++||++|.||+| ++ .++.+.+.++||+ .|.+|+.++|||+.|++
T Consensus 258 ~~~~G~~~~lP~g~~l~~~l~~~~r~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~~my~-~d~~~~~~~LrP~~~~~ 336 (642)
T 1qf6_A 258 EEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFT-TSSENREYCIKPMNCPG 336 (642)
T ss_dssp TTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEE-EEETTEEEEECSSSHHH
T ss_pred cCCCCcEEECCcHHHHHHHHHHHHHHHHHHcCCEEEECCcCccHHHHhhcCcccccccccee-eecCCceEEecCCCCHH
Confidence 44899999999999999999999999999999999999999 22 2334567889999 99999999999999999
Q ss_pred HHHHHHhC----CCCceeEEEecCeEEcCCC--C-C--CCCceeEeEEEEeCCCCcccHHH---HHHHHHHHHHHcCCCc
Q 001059 787 FIRWAISN----QKSSFKRYEISSVYRRAIG--H-S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 787 iaR~~~~~----~~~P~r~~Y~g~VfR~e~~--~-~--~~~ef~Q~GvEiiG~~~~~aDaE---vi~la~~~l~~lgi~~ 854 (1170)
++|+++.+ +..|+|+||+|+|||+|++ + + |.|||+|+|+|+||.+ ..+|+| ++.++.++++.||+.+
T Consensus 337 ~~~~~~~~~~syr~LPlr~~~~g~~fR~E~~g~~~GL~R~ReF~q~d~~~f~~~-~~~~~e~~~~i~~~~~i~~~lGl~~ 415 (642)
T 1qf6_A 337 HVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTE-EQIRDEVNGCIRLVYDMYSTFGFEK 415 (642)
T ss_dssp HHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECG-GGHHHHHHHHHHHHHHHHGGGTCCC
T ss_pred HHHHHHhhhhhccccCeEEEEeccEEecCCCccccCCceeeeEEEccEEEEcCH-HHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 99998864 3569999999999999986 4 3 5677999999999964 367777 6999999999999974
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
+.+.++++. . ..+|-.+.|...-. ..++++...|++-
T Consensus 416 -~~v~l~~~~--e---~~~g~~e~w~~a~~----------------------~l~~~l~~~g~~~--------------- 452 (642)
T 1qf6_A 416 -IVVKLSTRP--E---KRIGSDEMWDRAEA----------------------DLAVALEENNIPF--------------- 452 (642)
T ss_dssp -CEEEEECCC--S---SCCSCHHHHHHHHH----------------------HHHHHHHTTTCCC---------------
T ss_pred -eEEEEecCc--c---cccCCHHHHHHHHH----------------------HHHHHHHHcCCCc---------------
Confidence 999999853 0 01121111100000 0011111111100
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
..++. + ...+| .++.+-+....|.+||+|++|.-|.. +...|+||
T Consensus 453 -------------~~~~g------~--~afyg--pk~d~~~~d~~G~~~~~gti~~df~l------------~~r~~~~y 497 (642)
T 1qf6_A 453 -------------EYQLG------E--GAFYG--PKIEFTLYDCLDRAWQCGTVQLDFSL------------PSRLSASY 497 (642)
T ss_dssp -------------EEETT------C--SCTTC--CEEEEEEECTTCCEEEEEEEEEESSH------------HHHTTCCE
T ss_pred -------------EEcCC------C--ccccc--CcccEEEEccCCceEEeeeEEEeccC------------CccCCCEE
Confidence 00000 0 00011 23433333345788888887643321 12345566
Q ss_pred chhhhhcccccccccCCCCCCCCceEE-ec--cHHHHHhhccCC--CCCCCCCCCceEEEEEcCCCccHHHHHHHHHHHH
Q 001059 1015 DYLLHRMWDREYVGYASRTNPPSGVGA-SL--ALETIIQHYPVD--FKPVRNEAGTSVLVCSRGGGGLLVERMELVAELW 1089 (1170)
Q Consensus 1015 D~L~~~fg~~~~~~~~g~~~~~pAvGf-ai--glerL~~~L~~~--~~~~~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR 1089 (1170)
-+. .| +...|++|+ ++ ++||++.+|.++ ...+...+|.+|+|++++ +....+|.++++.||
T Consensus 498 ~~~---~g----------~~~~P~~~hrai~G~ieR~i~~liE~~~~~~P~~laP~qv~vipi~-~~~~~~a~~v~~~L~ 563 (642)
T 1qf6_A 498 VGE---DN----------ERKVPVMIHRAILGSMERFIGILTEEFAGFFPTWLAPVQVVIMNIT-DSQSEYVNELTQKLS 563 (642)
T ss_dssp ECT---TS----------CEECCEEEEEEEEEEHHHHHHHHHHHHTTCCCTTTCSSCEEEEESS-HHHHHHHHHHHHHHH
T ss_pred Eec---CC----------CCcCcEEEEeccCCCHHHHHHHHHHHhcCCCCcccCCceEEEEEeC-HHHHHHHHHHHHHHH
Confidence 321 11 123589988 87 899999886522 222233578899999996 778899999999999
Q ss_pred HcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHhh
Q 001059 1090 EENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1090 ~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
+.|++|++++. +.++++++++|+..|+|++|+||++|+++|+|+||++++++|..++++++++.|.+.++..
T Consensus 564 ~~Gi~v~~D~~-~~~~g~kir~a~~~g~p~~ivvG~~E~~~~~V~vr~r~~~~~~~v~~~e~~~~l~~~~~~~ 635 (642)
T 1qf6_A 564 NAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGKDLGSMDVNEVIEKLQQEIRSR 635 (642)
T ss_dssp TTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECTTTGGGCCEEEEESSSCEEEEECHHHHHHHHHHHHHTT
T ss_pred hCCCEEEEECC-CCCHHHHHHHHHHcCCCEEEEECchhhhcCeEEEEECCCCceEEEEHHHHHHHHHHHHhhh
Confidence 99999998876 6799999999999999999999999999999999999999999999999999999887653
|
| >3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.5e-36 Score=370.19 Aligned_cols=263 Identities=25% Similarity=0.311 Sum_probs=199.5
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
...++|++.+.||+|+||+||+|.++.+|+.||||+++.. ........+.+|+.+|+.++||||+++++++....
T Consensus 11 ~~~grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~-~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~---- 85 (676)
T 3qa8_A 11 QTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQE-LSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQ---- 85 (676)
T ss_dssp ------CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSC-CCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTC----
T ss_pred CCCCCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEeccc-CCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccc----
Confidence 3458899999999999999999999999999999998643 34455678999999999999999999998762210
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC---CCCHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD---HFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~---~l~e~~~~~i~~qI~~gL~ 507 (1170)
........|+|||||+ ++|.+++.... .+++..++.++.||+.||+
T Consensus 86 ------------------------------~~~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~ 135 (676)
T 3qa8_A 86 ------------------------------KLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALR 135 (676)
T ss_dssp ------------------------------CCCTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHH
T ss_pred ------------------------------cccCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHH
Confidence 0012355689999995 59999998654 5999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCC---EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~---vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
|||++||+||||||+|||++.++. +||+|||+++...... ......||+.|+|||++.+ .
T Consensus 136 yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~----------------~~~~~~gt~~Y~APE~l~~-~ 198 (676)
T 3qa8_A 136 YLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGE----------------LCTEFVGTLQYLAPELLEQ-K 198 (676)
T ss_dssp HHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCC----------------CCCCCCSCCTTCSSCSSCC-S
T ss_pred HHHHCCCccCCCCHHHeEeecCCCceeEEEccccccccccccc----------------ccccccCCcccCChHHhcc-C
Confidence 999999999999999999997765 9999999998653211 1234579999999999987 5
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHH--------------hhhcCCC------CC-ccccCCHHHHHHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSD--------------LKQKGEL------PP-SWVAKFSEQESLL 640 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~--------------l~~~~~~------p~-~~~~~~~e~~~LI 640 (1170)
.++.++|||||||++|+|++ ||.+.......... ......+ |. .....++.+.+||
T Consensus 199 ~~s~ksDIwSLGviLyeLltG~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI 278 (676)
T 3qa8_A 199 KYTVTVDYWSFGTLAFECITGFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWL 278 (676)
T ss_dssp CCSTTHHHHHHHHHHHHHHSSCSSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHHHCCCCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHH
Confidence 78999999999999999997 77654222111000 0000000 11 1122456889999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.+||..||.+|||+.++++|+||...
T Consensus 279 ~~mL~~DP~kRPTa~elL~hp~F~~l 304 (676)
T 3qa8_A 279 QCMLMWHQRQRGTDPQNPNVGCFQAL 304 (676)
T ss_dssp HHHSCSSCC---CCTTCCCCTTHHHH
T ss_pred HHHccCCHhhCcCHHHHhcCHHHHHH
Confidence 99999999999999999999998753
|
| >3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-35 Score=352.70 Aligned_cols=266 Identities=15% Similarity=0.136 Sum_probs=193.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccC-CCceeEE---------EEE
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQH-QHVVRYY---------QAW 423 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~H-pnIV~l~---------~~~ 423 (1170)
..|...+.||+|+||+||+|++..+|+.||||+++.... .....+.+.+|+.+++.++| +|...+. ...
T Consensus 78 ~~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 157 (413)
T 3dzo_A 78 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 157 (413)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEE
T ss_pred eeEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhc
Confidence 468889999999999999999999999999999874332 22335678999999999987 3332211 111
Q ss_pred eecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-------cCCCCHHHHH
Q 001059 424 FETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-------YDHFDKELAW 496 (1170)
Q Consensus 424 ~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-------~~~l~e~~~~ 496 (1170)
...+.. .+ ..............++++|+++.++|.+++.. ...+++..++
T Consensus 158 ~~~~~~-----------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~L~~ll~~l~~~~~~~~~l~~~~~~ 214 (413)
T 3dzo_A 158 KDPQKK-----------KM------------IRVRLDERDMWVLSRFFLYPRMQSNLQTFGEVLLSHSSTHKSLVHHARL 214 (413)
T ss_dssp ECCC--------------------------------------CCSEEEEEECCSEEHHHHHHHHHHHTTTSHHHHHHHHH
T ss_pred ccCCCC-----------cc------------ccccCCCccccccceEEEeehhcCCHHHHHHHhhcccccCCCCCHHHHH
Confidence 000000 00 00000000111345789999999999988842 2237788899
Q ss_pred HHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCC
Q 001059 497 HLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTA 576 (1170)
Q Consensus 497 ~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~A 576 (1170)
.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++..... ....+| +.|+|
T Consensus 215 ~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~~~kL~DFG~a~~~~~~------------------~~~~~g-~~y~a 275 (413)
T 3dzo_A 215 QLTLQVIRLLASLHHYGLVHTYLRPVDIVLDQRGGVFLTGFEHLVRDGAS------------------AVSPIG-RGFAP 275 (413)
T ss_dssp HHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCGGGCEETTEE------------------ECCCCC-TTTCC
T ss_pred HHHHHHHHHHHHHHhCCcccCCcccceEEEecCCeEEEEeccceeecCCc------------------cccCCC-CceeC
Confidence 99999999999999999999999999999999999999999998864321 234578 99999
Q ss_pred ccccc---------CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 577 PEIEQ---------GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 577 PE~l~---------~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
||++. ....++.++|||||||++|||++ ||............ .......++++.+||.+||
T Consensus 276 PE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~-------~~~~~~~~~~~~~li~~~l 348 (413)
T 3dzo_A 276 PETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWI-------FRSCKNIPQPVRALLEGFL 348 (413)
T ss_dssp HHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGG-------GSSCCCCCHHHHHHHHHHT
T ss_pred chhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHH-------HhhcccCCHHHHHHHHHHc
Confidence 99983 22458889999999999999997 77654432221111 1122355679999999999
Q ss_pred CCCCCCCCCHHHHHhccCCCCchHH
Q 001059 645 SPSPSDRPSATELLQDALPPQMEYE 669 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~~~~~~~~~~ 669 (1170)
+.||.+|||+.++++|+||.+....
T Consensus 349 ~~dP~~Rpt~~~~l~~~~~~~~~~~ 373 (413)
T 3dzo_A 349 RYPKEDRLLPLQAMETPEYEQLRTE 373 (413)
T ss_dssp CSSGGGSCCHHHHTTSHHHHHHHHH
T ss_pred cCChhhCcCHHHHHhCHHHHHHHHH
Confidence 9999999999999999998776533
|
| >3uh0_A Threonyl-tRNA synthetase, mitochondrial; threonine tRNA, threonyl ADE threonyl sulfamoyl adenylate; HET: TSB; 2.00A {Saccharomyces cerevisiae} PDB: 3ugt_A 3ugq_A* 4eo4_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-34 Score=339.43 Aligned_cols=351 Identities=10% Similarity=0.021 Sum_probs=255.4
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHH-HHcCCccccccce----ec--cCCCcccccceEEEecc--CCceeeecCC
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMF-RQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTH--GGDLLELSHE 782 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f-~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~--~G~~laLRPD 782 (1170)
.....|+.||+|.++.+++.|++.+++.+ .++||++|.||+| ++ .++.+.+.++||+|.|. +|+.++|||+
T Consensus 50 ~~~~~G~~~~lP~g~~l~~~l~~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sGh~~~~~~emy~~~d~~~~~~~l~LrPt 129 (460)
T 3uh0_A 50 DPLSPGSMFFLPNGAKIFNKLIEFMKLQQKFKFGFNEVVTPLIYKKTLWEKSGHWENYADDMFKVETTDEEKEEYGLKPM 129 (460)
T ss_dssp CTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTSCCEECCCCSEEEHHHHHHHTCTTTSGGGSCEECC------CEEECSC
T ss_pred ccCCCCcEEECccHHHHHHHHHHHHHHHHHHhcCCEEEECCeeccHHHHHhcCCccccccceEEEecCCCCCceEEEccc
Confidence 34589999999999999999999999999 9999999999999 22 23456778999999997 4899999999
Q ss_pred CCHHHHHHHHhC----CCCceeEEEecCeEEcCCCC---C--CCCceeEeEEEEeCCCCcccHHH---HHHHHHHHH-HH
Q 001059 783 LRLPFIRWAISN----QKSSFKRYEISSVYRRAIGH---S--PPNRYLQGDFDIIGGASALTEAE---VLKVTMDIV-TR 849 (1170)
Q Consensus 783 ~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~~---~--~~~ef~Q~GvEiiG~~~~~aDaE---vi~la~~~l-~~ 849 (1170)
.|++++++++.. +..|+|+||+|+|||+|+++ + |.|||+|.|+++||.++ .+|+| +|.++.+++ +.
T Consensus 130 ~~~~~~~~~~~~~~s~r~LPlrl~~~g~~fR~E~~~~~~GL~R~ReF~q~d~~~f~~~e-~~~~e~~~~i~~~~~~~~~~ 208 (460)
T 3uh0_A 130 NCPGHCLIFGKKDRSYNELPLRFSDFSPLHRNEASGALSGLTRLRKFHQDDGHIFCTPS-QVKSEIFNSLKLIDIVYNKI 208 (460)
T ss_dssp SHHHHHHHHTTSCCBGGGCSEEEEECCEEECCCCTTTCBTTTBCSEEEEEEEEEEECGG-GHHHHHHHHHHHHHHHHTTT
T ss_pred CcHHHHHHHHhccccccccCeEEEEecCeeeCCCCCCCCCceeeeeEEEeeEEEEcCHH-HHHHHHHHHHHHHHHHHHHH
Confidence 999999998763 34599999999999999874 3 56679999999998764 56665 999999999 99
Q ss_pred cCCC--------cceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHH
Q 001059 850 FFHA--------ESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAV 921 (1170)
Q Consensus 850 lgi~--------~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 921 (1170)
||+. + +.+.++++. -+.+|-.+.|.++-
T Consensus 209 lGl~~~~~~~~~~-~~~~l~t~p-----e~~~G~~~~w~~ae-------------------------------------- 244 (460)
T 3uh0_A 209 FPFVKGGSGAESN-YFINFSTRP-----DHFIGDLKVWNHAE-------------------------------------- 244 (460)
T ss_dssp SCCC-----CCSS-CEEEEECCC-----SSCCSCHHHHHHHH--------------------------------------
T ss_pred cCCCCcccccccc-eEEEEccCC-----cccCCCHHHHHHHH--------------------------------------
Confidence 9997 5 888887742 01122111110000
Q ss_pred HHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEe-ccCCCcc
Q 001059 922 VNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFS-VKEKYPA 1000 (1170)
Q Consensus 922 ~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~-~~~~~~~ 1000 (1170)
..|.. +|+..|. .+.++++ .-.|| |.-.++.. ...+..
T Consensus 245 -~~L~~---------------------------------~l~~~g~--~~~~~~g---~gafy-gpkid~~~~d~~gr~- 283 (460)
T 3uh0_A 245 -QVLKE---------------------------------ILEESGK--PWKLNPG---DGAFY-GPKLDIMVTDHLRKT- 283 (460)
T ss_dssp -HHHHH---------------------------------HHHHHTC--CEEEETT---CSCSS-CCEEEEEEECTTSCE-
T ss_pred -HHHHH---------------------------------HHHHhCC--CeeECCC---ccccc-cceEEEEEEccCCCe-
Confidence 00000 1122232 3455555 33466 43333322 111210
Q ss_pred ccccccee----ccccccchhhhhcccccccccCCCCCCCCce----EEeccHHHHHhhccC--CCCCCCCCCCceEEEE
Q 001059 1001 TLVEGTLL----AVGGRYDYLLHRMWDREYVGYASRTNPPSGV----GASLALETIIQHYPV--DFKPVRNEAGTSVLVC 1070 (1170)
Q Consensus 1001 ~~~~~~~I----~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv----GfaiglerL~~~L~~--~~~~~~~~~~~~vlv~ 1070 (1170)
.+.++| ..+.|||-. | ....| +...|++ +|+ ++||++.+|.+ +...+...+|.+|+|+
T Consensus 284 --~q~~Tiqld~~~~~rf~l~---y-----~~~~g-~~~~P~~ih~~~~G-g~eRli~~Lie~~~g~~P~~laP~qv~Vi 351 (460)
T 3uh0_A 284 --HQVATIQLDFQLPERFDLK---F-----KDQDN-SYKRPIMIHRATFG-SIERFMALLIDSNEGRWPFWLNPYQAVII 351 (460)
T ss_dssp --EEEEEEEEESHHHHHTTCC---E-----ECTTS-CEECCEEEEEEEEE-EHHHHHHHHHHHHTTCCCGGGCSCCEEEE
T ss_pred --eeecccccccccccccceE---E-----ECCCC-CccCcEEEecCcch-HHHHHHHHHHHHcCCCCCCCCCCceEEEE
Confidence 011122 234555533 1 11122 2346888 477 89999988753 2333334678999999
Q ss_pred EcCCCc---cHHHHHHHHHHHHHc--------------CCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeE
Q 001059 1071 SRGGGG---LLVERMELVAELWEE--------------NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLV 1133 (1170)
Q Consensus 1071 ~~~~~~---~~~~a~~ia~~LR~~--------------Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v 1133 (1170)
+++ +. ...+|.++++.||+. |++|++++. +.++++++++|++.|+|++|+||++|+++|+|
T Consensus 352 pi~-~~~~~~~~~a~~l~~~Lr~~~~~~~~~~~~~~~~Gi~v~~D~~-~~~lg~k~r~Ad~~g~p~~ivvG~~E~~~g~V 429 (460)
T 3uh0_A 352 PVN-TKNVQQLDMCTALQKKLRNELEADDMEPVPLNDWHFNVDLDIR-NEPVGYRIKSAILKNYSYLIIVGDEEVQLQKY 429 (460)
T ss_dssp ESS-TTCHHHHHHHHHHHHHHHCCCCTTSSCCCCTTCCCCCEEECCC-SSCHHHHHHHHHHHTCSEEEEECHHHHHHTCE
T ss_pred Eec-CCcHHHHHHHHHHHHHHHcCcccccccccccCCCCEEEEEECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhCCeE
Confidence 996 55 688999999999998 999998876 67999999999999999999999999999999
Q ss_pred EEEEcCCCc-ccccchHHHHHHHHHHHHhh
Q 001059 1134 KVRHLDVKK-EKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1134 ~vk~l~~~e-q~~v~~~~l~~~l~~~l~~~ 1162 (1170)
+||++++++ |..++++++++.+.++++++
T Consensus 430 tvr~r~~~e~q~~v~~~el~~~l~~~~~~~ 459 (460)
T 3uh0_A 430 NIRERDNRKSFEKLTMSQIWEKFIELEKNY 459 (460)
T ss_dssp EEEEGGGTTSCEEECHHHHHHHHHHHHHTT
T ss_pred EEEECCCCceeEEeeHHHHHHHHHHHHHhc
Confidence 999999999 99999999999999988753
|
| >1nj1_A PROR, proline-tRNA synthetase, proline--tRNA ligase; protein-aminoacyladenylate complex class-II tRNA synthetase,; HET: 5CA; 2.55A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.51.1.1 d.68.5.1 d.104.1.1 PDB: 1nj2_A 1nj5_A* 1nj6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.1e-34 Score=343.34 Aligned_cols=332 Identities=10% Similarity=0.068 Sum_probs=266.1
Q ss_pred cccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC---CcccccceEEEeccC----Ccee
Q 001059 709 LRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD---CPQFKRNTVKLLTHG----GDLL 777 (1170)
Q Consensus 709 ~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~---~~~~~~~my~f~D~~----G~~l 777 (1170)
++....+.|+.||+|.++.+++.|++.+++.|++ ||++|.||+| ++.+. .+.+.++||+|.|.+ |+.+
T Consensus 54 id~~~~~~G~~~~~P~g~~l~~~i~~~~~~~~~~-G~~ei~tP~l~~~~l~~~~sG~~~~f~~emy~~~d~g~~~~~~~l 132 (501)
T 1nj1_A 54 IDQRYPVKGMHVWMPHGFMIRKNTLKILRRILDR-DHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKL 132 (501)
T ss_dssp EECCCSSTTCCEECHHHHHHHHHHHHHHHHHHTT-TCEECCCCSEEEHHHHTTSHHHHHHTTTTCCEEEEETTEEEEEEE
T ss_pred ccccCCCCceEEECccHHHHHHHHHHHHHHHHHc-CCEEEecCcEecHHHHhcccCCcccCCcceEEEecCCCcccCCee
Confidence 3333456999999999999999999999999999 9999999999 34332 345789999999986 7899
Q ss_pred eecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcCCC-CC---CCCcee-EeEEEEeCCCCcccHHHH---HHHHHH
Q 001059 778 ELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HS---PPNRYL-QGDFDIIGGASALTEAEV---LKVTMD 845 (1170)
Q Consensus 778 aLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~-~~---~~~ef~-Q~GvEiiG~~~~~aDaEv---i~la~~ 845 (1170)
+|||+.|++++|+++.+ ...|+|+||+|+|||+|++ +. |.|||+ |++++++|.....+|+|+ +.++.+
T Consensus 133 ~LrPt~e~~i~~~~~~~~~s~~~LPlr~~q~g~~fR~E~~~~rGl~R~REF~~q~e~~~~~~~~e~a~~e~~~~l~~~~~ 212 (501)
T 1nj1_A 133 ALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKE 212 (501)
T ss_dssp EECSSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEESSHHHHHHHHHHHHHHHHH
T ss_pred EEccCCCHHHHHHHHhhhcccccCCEEEEeecCEeeCCCCCCCCCceeEEEeeeeeEEEEECCHHHHHHHHHHHHHHHHH
Confidence 99999999999998873 3569999999999999877 54 456799 999999999888888885 999999
Q ss_pred HHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHH
Q 001059 846 IVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRL 925 (1170)
Q Consensus 846 ~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l 925 (1170)
+++.||+. +.+.++... ++ +
T Consensus 213 i~~~Lgl~--~~~~~~~~~--------------------------e~-----------------------~--------- 232 (501)
T 1nj1_A 213 FFNSLGIP--YLITRRPPW--------------------------DK-----------------------F--------- 232 (501)
T ss_dssp HHHHHTCC--CEEEECCTT--------------------------TS-----------------------C---------
T ss_pred HHHHCCCe--EEEEeCCch--------------------------hh-----------------------c---------
Confidence 99999996 887765310 00 0
Q ss_pred HHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccccc
Q 001059 926 QTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEG 1005 (1170)
Q Consensus 926 ~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~ 1005 (1170)
.+. ...+.++..+..|..|+.|++|.+- . .
T Consensus 233 -------~~a--------------------------------~~~~die~~l~~g~~~ei~t~~~lg---~--------~ 262 (501)
T 1nj1_A 233 -------PGS--------------------------------EYTVAFDTLMPDGKTLQIGTVHNLG---Q--------T 262 (501)
T ss_dssp -------TTC--------------------------------SEEEEEEEECTTSCEEEEEEEEEEE---T--------H
T ss_pred -------CCc--------------------------------ccceEEEEEcCCCCEEEEEEEEecc---c--------c
Confidence 000 0124556666668889999998662 1 2
Q ss_pred ceeccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEc-C-CC--
Q 001059 1006 TLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSR-G-GG-- 1075 (1170)
Q Consensus 1006 ~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~-~-~~-- 1075 (1170)
.+.+.|+||++- . |.. ..++++||+++ +|++.+|.+ +...+...+|.+|+|+++ + .+
T Consensus 263 ~a~~~~~ry~~~--~-g~~---------~~~h~~g~Gig-eRli~aliE~~~d~~Gl~~P~~laP~qV~Iipi~~~~~~~ 329 (501)
T 1nj1_A 263 FARTFEIKFETP--E-GDH---------EYVHQTCYGLS-DRVIASVIAIHGDESGLCLPPDVAAHQVVIVPIIFKKAAE 329 (501)
T ss_dssp HHHHHTCEEECT--T-SCE---------EECEEEEEEEC-THHHHHHHHHTCCSSSEECCTTTSSCSEEEEECCSSSSHH
T ss_pred chhhcCeEEECC--C-CCE---------EeeeeccccHH-HHHHHHHHHHcCcccCccCCccccCceEEEEEeccCCchH
Confidence 367889999863 1 221 23467899999 999888742 112223347889999998 4 32
Q ss_pred ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHH
Q 001059 1076 GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFL 1155 (1170)
Q Consensus 1076 ~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l 1155 (1170)
....+|.++++.||+.|++|++++. +.++++++++|++.|+|++|+||++|+++|+|+||++++++|..|+++++++.|
T Consensus 330 ~~~~~a~~l~~~Lr~~Gi~v~~D~~-~~s~g~k~~~a~~~G~p~~iiiG~~e~~~~~V~vr~r~t~eq~~v~~~el~~~l 408 (501)
T 1nj1_A 330 EVMEACRELRSRLEAAGFRVHLDDR-DIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETL 408 (501)
T ss_dssp HHHHHHHHHHHHHHTTTCCEEECCC-SSCHHHHHHHHHHEECSEEEEECHHHHTTTEEEEEESSSCCEEEEETTTHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECC-CCCHHHHHHHHHhcCCCEEEEECcchhhCCEEEEEECCCCceEEEeHHHHHHHH
Confidence 5788999999999999999998876 679999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccC
Q 001059 1156 LDAIASQFRN 1165 (1170)
Q Consensus 1156 ~~~l~~~~~~ 1165 (1170)
.+.++..+++
T Consensus 409 ~~~l~~~~~~ 418 (501)
T 1nj1_A 409 RELMKDILEN 418 (501)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887765543
|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-34 Score=363.60 Aligned_cols=244 Identities=23% Similarity=0.325 Sum_probs=193.7
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEcc-CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKL-DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~-tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
...++|++.+.||+|+||+||+|.+.. +|+.||||++... ........+.+|+.+|+.++||||++++++|.+.+.
T Consensus 77 ~~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~-- 153 (681)
T 2pzi_A 77 IVAGQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHS-GDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDR-- 153 (681)
T ss_dssp EETTTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSS-CCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECT--
T ss_pred EeCCceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCcc-CCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCC--
Confidence 445899999999999999999999976 7999999988643 334455678999999999999999999998855310
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
.....+|+|||||+| +|.+++.. .+++.+++.++.||+.||.||
T Consensus 154 ---------------------------------~~~~~~~lv~E~~~g~~L~~~~~~--~l~~~~~~~~~~qi~~aL~~l 198 (681)
T 2pzi_A 154 ---------------------------------HGDPVGYIVMEYVGGQSLKRSKGQ--KLPVAEAIAYLLEILPALSYL 198 (681)
T ss_dssp ---------------------------------TSCEEEEEEEECCCCEECC----C--CCCHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEEEEeCCCCcHHHHHhC--CCCHHHHHHHHHHHHHHHHHH
Confidence 113457999999975 88887654 799999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.+ .+||+|||+++.... ....+||+.|+|||++.+. ++.+
T Consensus 199 H~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~-------------------~~~~~gt~~y~aPE~~~~~--~~~~ 256 (681)
T 2pzi_A 199 HSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINS-------------------FGYLYGTPGFQAPEIVRTG--PTVA 256 (681)
T ss_dssp HHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTC-------------------CSCCCCCTTTSCTTHHHHC--SCHH
T ss_pred HHCCCeecccChHHeEEeCC-cEEEEecccchhccc-------------------CCccCCCccccCHHHHcCC--CCCc
Confidence 99999999999999999875 999999999986421 1345799999999999873 5899
Q ss_pred chhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCC--CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCC
Q 001059 590 ADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALP 663 (1170)
Q Consensus 590 sDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p--~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~ 663 (1170)
+|||||||++|+|++++.+.... . ...++ ......++.+.+||.+||+.||.+||+..+.+.|+|.
T Consensus 257 sDi~slG~~l~~l~~g~~~~~~~------~--~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~ 324 (681)
T 2pzi_A 257 TDIYTVGRTLAALTLDLPTRNGR------Y--VDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLT 324 (681)
T ss_dssp HHHHHHHHHHHHHHSCCCEETTE------E--CSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHH
T ss_pred eehhhhHHHHHHHHhCCCCCccc------c--cccccccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHH
Confidence 99999999999999855433210 0 01111 1222345688999999999999999998888888654
|
| >3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-33 Score=317.61 Aligned_cols=222 Identities=14% Similarity=0.076 Sum_probs=177.9
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||.||+|++..+|+.||||++...... ......+.+|+.+++.++||||+++++++..
T Consensus 29 ~~~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~------ 102 (286)
T 3uqc_A 29 ANGRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHT------ 102 (286)
T ss_dssp TTTTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEE------
T ss_pred ecCcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEE------
Confidence 447799999999999999999999999999999999765433 3445789999999999999999999998743
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ ++|.+++.. .....++..++.||+.||+|||
T Consensus 103 ----------------------------------~~~~~lv~e~~~g~~L~~~l~~--~~~~~~~~~i~~ql~~aL~~lH 146 (286)
T 3uqc_A 103 ----------------------------------RAGGLVVAEWIRGGSLQEVADT--SPSPVGAIRAMQSLAAAADAAH 146 (286)
T ss_dssp ----------------------------------TTEEEEEEECCCEEEHHHHHTT--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCcEEEEEEecCCCCHHHHHhc--CCChHHHHHHHHHHHHHHHHHH
Confidence 356899999997 599999854 2466778999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+++| |++| ++.++
T Consensus 147 ~~givH~Dikp~NIll~~~g~~kl~~~~-----------------------------------~~~~--------~~~~~ 183 (286)
T 3uqc_A 147 RAGVALSIDHPSRVRVSIDGDVVLAYPA-----------------------------------TMPD--------ANPQD 183 (286)
T ss_dssp HTTCCCCCCSGGGEEEETTSCEEECSCC-----------------------------------CCTT--------CCHHH
T ss_pred HCCCccCCCCcccEEEcCCCCEEEEecc-----------------------------------ccCC--------CCchh
Confidence 9999999999999999999999998443 3332 68899
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhh-hcCCCC---CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLK-QKGELP---PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~-~~~~~p---~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||++ ||.............. .....+ ......++++.+||.+||+.||.+| |+.++++.
T Consensus 184 Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R-s~~el~~~ 259 (286)
T 3uqc_A 184 DIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIR-SASTLLNL 259 (286)
T ss_dssp HHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTSCHHHHHHHHHHHCTTSSCC-CHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCCCHHHHHHHHHHcccCCccC-CHHHHHHH
Confidence 99999999999997 8865433211000000 011111 1224567899999999999999999 99999874
|
| >2zt5_A Glycyl-tRNA synthetase; ligase, AP4A, glycine, ATP, Gly-AMP, aminoacyl-tRNA synthetase, ATP-binding, charcot-marie-tooth disease, disease mutation; HET: B4P; 2.50A {Homo sapiens} PDB: 2pme_A* 2zt6_A* 2zt7_A* 2zt8_A* 2zxf_A* 2pmf_A 2q5h_A 2q5i_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=326.06 Aligned_cols=391 Identities=12% Similarity=0.033 Sum_probs=229.0
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHH-HcCCccccccce----ec--cCCCcccc---------cceEEEecc-----
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFR-QHCAKHLEIEPM----YL--LGDCPQFK---------RNTVKLLTH----- 772 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~-~~Gy~~I~tP~~----~~--~~~~~~~~---------~~my~f~D~----- 772 (1170)
.+.|+.||+|.++++++.|++.|++.|. ..||.+|.||+| ++ +++.+.+. ++||+| |+
T Consensus 89 g~~G~~d~lP~G~~l~~~Ie~~~r~~~~~~~g~~EV~tP~l~~~~lwk~SGH~~~f~d~m~~~~~~~e~yr~-D~l~e~~ 167 (693)
T 2zt5_A 89 GVSGLYDFGPVGCALKNNIIQTWRQHFIQEEQILEIDCTMLTPEPVLKTSGHVDKFADFMVKDVKNGECFRA-DHLLKAH 167 (693)
T ss_dssp CCTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECCCCSEEEHHHHHHHTHHHHCEEEEEEBSSSCCEEEH-HHHHHHH
T ss_pred CCCCeEEECCChHHHHHHHHHHHHHHHHHhcCcEEEEeCCcccHHHHhhcCCcccccccceeeccCCceeec-cHhHHHH
Confidence 3589999999999999999999999998 569999999999 22 22333322 466665 33
Q ss_pred --------------------------------------------------------------------CCceeeecCCCC
Q 001059 773 --------------------------------------------------------------------GGDLLELSHELR 784 (1170)
Q Consensus 773 --------------------------------------------------------------------~G~~laLRPD~T 784 (1170)
+|+.+.||||.|
T Consensus 168 ~~~~~~~~~~~~~~~~e~~~~~~~l~~~~~eel~~li~~~~~~~P~~g~~~~~~~~fnlmf~t~igp~~~~~~~LRPEta 247 (693)
T 2zt5_A 168 LQKLMSDKKCSVEKKSEMESVLAQLDNYGQQELADLFVNYNVKSPITGNDLSPPVSFNLMFKTFIGPGGNMPGYLRPETA 247 (693)
T ss_dssp HHHHHHSTTCCHHHHHHHHHHHTTTTTCCHHHHHHHHHHTTCBCSSSCCBBCCCEEEECCCEEECSSSSSSEEEECSCSH
T ss_pred HHHhhccccccHHHHHHHHHHHhhccCCCHHHHHHHHHHcCCCCCCCCCCCCCcchhheeeeccccCCCCcceeeccccc
Confidence 468899999999
Q ss_pred HHH----HHHHHh-CCCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcc--------cHHH---------
Q 001059 785 LPF----IRWAIS-NQKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASAL--------TEAE--------- 838 (1170)
Q Consensus 785 ~~i----aR~~~~-~~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~--------aDaE--------- 838 (1170)
.++ +|.+.. ++..|+|+||+|++||+| +|+. |.|||+|.++|+||.++.. +|+|
T Consensus 248 qg~f~~f~r~~~~~~~~LP~~~aqiG~~fRnEisPr~GLlR~REF~q~d~e~F~~p~~~~~~~y~~v~da~~~~~~~~~~ 327 (693)
T 2zt5_A 248 QGIFLNFKRLLEFNQGKLPFAAAQIGNSFRNEISPRSGLIRVREFTMAEIEHFVDPSEKDHPKFQNVADLHLYLYSAKAQ 327 (693)
T ss_dssp HHHHTTHHHHHHHTTTCSCEEEEEEEEEECCCSSCCSGGGSCSEEEEEEEEEEECTTCCCCTTGGGTTTCEEEEECHHHH
T ss_pred hHHHHHHHHHHHHhCcCCCEEEEeecceecCCCCCCCCCccceeeEEccceEEeCcchhcchhHHHHHHHHHhhhhhhhh
Confidence 998 998887 467799999999999998 7775 5567999999999987764 3433
Q ss_pred ---------------------------HHHHHHHHHHHcCCCcceEEEeCcH--HHHHHH---------HHHhCCCHH--
Q 001059 839 ---------------------------VLKVTMDIVTRFFHAESCDIHLNHG--DLLEAI---------WSWAGIKAE-- 878 (1170)
Q Consensus 839 ---------------------------vi~la~~~l~~lgi~~~~~i~lg~~--~il~~~---------l~~lgl~~~-- 878 (1170)
+|.++.+++..+|+.. ..+.+... .-...+ +...|-.+.
T Consensus 328 ~~~~~~~~~~~~ea~~~g~i~~e~~~~~i~~~~~f~~~lGi~~-~~~~~~~~~~~e~a~ya~~~~d~e~~~~~g~~e~~~ 406 (693)
T 2zt5_A 328 VSGQSARKMRLGDAVEQGVINNTVLGYFIGRIYLYLTKVGISP-DKLRFRQHMENEMAHYACDCWDAESKTSYGWIEIVG 406 (693)
T ss_dssp HTTCCCEEEEHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTCCG-GGEEEEECCGGGSCTTCSSEEEEEEEETTEEEEEEE
T ss_pred ccccccccchhhhhhhhcccchHHHHHHHHHHHHHHHHcCcCc-cEEEEeccCchhhccchhhhhhehhhccCChHHHHH
Confidence 8899999999999974 33443211 000000 000000000
Q ss_pred ----HHHHHHHHHHH-hcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhH
Q 001059 879 ----HREKVAELLAM-MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPT 953 (1170)
Q Consensus 879 ----~~~~l~~~l~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~ 953 (1170)
..-.|...... ...+. .. .+.......+... +.......... +..++..+.+.|. ...
T Consensus 407 ~a~r~~~dL~~~~~~s~~~l~--~~-~~~~~p~~~~~~~----~~~~~~~~g~~----i~~~Ap~i~d~L~------~~~ 469 (693)
T 2zt5_A 407 CADRSCYDLSCHARATKVPLV--AE-KPLKEPKTVNVVQ----FEPSKGAIGKA----YKKDAKLVMEYLA------ICD 469 (693)
T ss_dssp EECCCSHHHHHHHHHHTCCCC--EE-EC----------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhccchh--hh-cccCcccceeeee----ecCChHHHHHH----HHhcccHHHHHhh------hhh
Confidence 00011111111 00000 00 0000000000000 00000000000 0000011111111 111
Q ss_pred HHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCC
Q 001059 954 RKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYAS 1031 (1170)
Q Consensus 954 ~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g 1031 (1170)
...++++ .|...|. -.+.+| |++|++.....+. .... .-..||||
T Consensus 470 ~~~~~~l~~~L~~~g~-i~i~vd-----------Gt~Fei~~~~~~~--~~y~--~~~~Ggry----------------- 516 (693)
T 2zt5_A 470 ECYITEMEMLLNEKGE-FTIETE-----------GKTFQLTKDMINV--KRFQ--KTLYVEEV----------------- 516 (693)
T ss_dssp ----------------------------------------------------------CCEEE-----------------
T ss_pred HHHHHHHHHHHHhcCC-EEEEEC-----------CEEEEecccccce--eeEE--eccCCcEe-----------------
Confidence 2233333 4455551 123334 6888885321000 0000 01144555
Q ss_pred CCCCCCce-EEeccHHHHHhhcc-C------------CCCCCCCCCCceEEEEEcCCC-ccHHHHHHHHHHHHHcCCeEE
Q 001059 1032 RTNPPSGV-GASLALETIIQHYP-V------------DFKPVRNEAGTSVLVCSRGGG-GLLVERMELVAELWEENIKAQ 1096 (1170)
Q Consensus 1032 ~~~~~pAv-GfaiglerL~~~L~-~------------~~~~~~~~~~~~vlv~~~~~~-~~~~~a~~ia~~LR~~Gi~v~ 1096 (1170)
+|+| |+|+|++||+.+|. . +...+...+|.+|+|++.+.+ .....|.++++.||+.|++|+
T Consensus 517 ----~P~Vi~~s~GigRli~aLie~~~~~~~~~~~r~g~~~P~~lAP~qV~Vipl~~~~~~~~~A~~l~~~Lr~~Gi~v~ 592 (693)
T 2zt5_A 517 ----VPNVIEPSFGLGRIMYTVFEHTFHVREGDEQRTFFSFPAVVAPFKCSVLPLSQNQEFMPFVKELSEALTRHGVSHK 592 (693)
T ss_dssp ----CCEEEEEEEEHHHHHHHHHHHHEEECSSTTCCEEECCCTTTSSCSEEEEESCCSTTTHHHHHHHHHHHHHTTCCEE
T ss_pred ----cCcceeCeehHHHHHHHHHHHhccccccccccccccCCCCCCCCeEEEEEecCcHHHHHHHHHHHHHHHHCCCEEE
Confidence 3888 99999999998873 2 112222346789999999632 378999999999999999999
Q ss_pred EeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcc--cCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1097 FVPVPDPSLTEQYEYASEHDIKCLVILTDTGA--QKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1097 ~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~--~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+++. ++++++++++|++.|+||+|+||++|+ ++|+|+||+|++++|..|+++++++.|.+.++.
T Consensus 593 ~D~~-~~sigkk~k~Ad~~G~p~~IiIG~~El~~~~g~Vtvr~r~t~eq~~v~l~el~~~l~~~l~~ 658 (693)
T 2zt5_A 593 VDDS-SGSIGRRYARTDEIGVAFGVTIDFDTVNKTPHTATLRDRDSMRQIRAEISELPSIVQDLANG 658 (693)
T ss_dssp ECCC-CSCHHHHHHHHHHTTCCEEEEECHHHHTSSSCEEEEEETTTCCEEEEETTTHHHHHHHHHTT
T ss_pred EECC-CCCHHHHHHHHHHcCCCEEEEEcchhhhccCCEEEEEECCCCceEEEeHHHHHHHHHHHHhC
Confidence 8775 679999999999999999999999999 999999999999999999999999999887653
|
| >1ati_A Glycyl-tRNA synthetase; protein biosynthesis, ligase, aminoacyl-tRNA SYN; 2.75A {Thermus thermophilus} SCOP: c.51.1.1 d.104.1.1 PDB: 1b76_A* 1ggm_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=2.4e-29 Score=303.01 Aligned_cols=345 Identities=13% Similarity=0.056 Sum_probs=238.3
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHH--HcCCccccccce----ec--cCCCcccccceEE-----------------
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFR--QHCAKHLEIEPM----YL--LGDCPQFKRNTVK----------------- 768 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~--~~Gy~~I~tP~~----~~--~~~~~~~~~~my~----------------- 768 (1170)
.+.|+.||+|.++.+++.|++.+++.|. ++||.+|.||+| ++ +++.+.+.+.||+
T Consensus 27 ~~~G~~d~~P~G~~l~~~l~~~~r~~~~~~~~g~~ev~tP~l~~~~l~~~SGh~~~f~d~m~~~~~~~~~~r~d~l~~~~ 106 (505)
T 1ati_A 27 GLQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQ 106 (505)
T ss_dssp CCTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHHHHCEEEEEEC----------------
T ss_pred CCCCcceeCccHHHHHHHHHHHHHHHHHHhhCCcEEEEccccCCHHHHHhcCChhhcCccceeccccccccchhhhhhhh
Confidence 4589999999999999999999999999 999999999999 11 2223333334443
Q ss_pred --------------------E------e-----------------ccC-------------------------Cceeeec
Q 001059 769 --------------------L------L-----------------THG-------------------------GDLLELS 780 (1170)
Q Consensus 769 --------------------f------~-----------------D~~-------------------------G~~laLR 780 (1170)
| . +.+ ++.+.||
T Consensus 107 ~~~~~~~~~~~~~~~~e~~~~~~~~~i~~p~~~~~~m~~~~~~cp~~~~~~~~~~~~~fnlmf~t~~gpt~ee~~~~~LR 186 (505)
T 1ati_A 107 PEEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLR 186 (505)
T ss_dssp ----------------------------------------------------CCCCEEEECBEEEECSSCCCGGGEEEEC
T ss_pred hhhhccccccccccHHHHHHHHHhhccccccccccccccccccCCccCccccccccchhhhhhhcccCCccccccceeec
Confidence 3 2 111 4678999
Q ss_pred CCCCHHH----HHHHHhC-CCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCccc--HHHHHHHHHHHHHH
Q 001059 781 HELRLPF----IRWAISN-QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALT--EAEVLKVTMDIVTR 849 (1170)
Q Consensus 781 PD~T~~i----aR~~~~~-~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~a--DaEvi~la~~~l~~ 849 (1170)
|+.|.++ +|.+.++ +..|+|+||+|++||+| +|+. |.|||+|.++++||.++... +++++.++.++++.
T Consensus 187 PE~t~~i~~~~~~~~~sy~r~LP~rl~qig~~FR~E~~pr~GL~R~REF~q~d~~~f~~~e~~~~~~~~~i~~~~~i~~~ 266 (505)
T 1ati_A 187 PETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQE 266 (505)
T ss_dssp SSSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHH
T ss_pred ccchhHHHHHHHHHHHhcCCCCCEEEEEeeceeeCCCCCCCCCCcccceEEeeEEEEECHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999 8888887 78899999999999998 7774 55679999999999888755 88999999999999
Q ss_pred cCCCcceEEEeCcHHHHHHHHHHhC-CCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHH
Q 001059 850 FFHAESCDIHLNHGDLLEAIWSWAG-IKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTV 928 (1170)
Q Consensus 850 lgi~~~~~i~lg~~~il~~~l~~lg-l~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l 928 (1170)
||+.. ..+.+.... . +.+. ...+... +..... .+. . + + .++
T Consensus 267 LGl~~-~~v~~~~~~--~---~~~~~~~~~~~d-----~E~~~p---~~~--~--------e-~--~g~----------- 308 (505)
T 1ati_A 267 MGLSR-ENLVPYQQP--P---ESSAHYAKATVD-----ILYRFP---HGS--L--------E-L--EGI----------- 308 (505)
T ss_dssp TTCCG-GGEEEEECC--T---TTSCTTCSEEEE-----EEEEET---TEE--E--------E-E--EEE-----------
T ss_pred cCCCe-EEEEECCCC--h---HhhhcccHHHHh-----HHhhcC---CCC--c--------c-c--hhh-----------
Confidence 99974 555544310 0 0000 0000000 000000 000 0 0 0 000
Q ss_pred HHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccccccee
Q 001059 929 GLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL 1008 (1170)
Q Consensus 929 ~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I 1008 (1170)
..+++ ..+..- .. ..+.. .++.+. ..+-|+++.|+++..
T Consensus 309 --~~~~d--~~L~~~---~~---------------~~~~~-~~~~~~----~~n~~~~~~~~y~d~-------------- 347 (505)
T 1ati_A 309 --AQRTD--FDLGSH---TK---------------DQEAL-GITARV----LRNEHSTQRLAYRDP-------------- 347 (505)
T ss_dssp --EECTT--HHHHHH---CS---------------STTTT-TCCSCC----CCCSCCCSCCCEECS--------------
T ss_pred --hcccc--eecchh---hc---------------ccccc-ceeeee----cccccceeEEEEEcC--------------
Confidence 00000 000000 00 00000 011111 123378888877532
Q ss_pred ccccccchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccCC---------C------CCCCCCCCceEEEEEcC
Q 001059 1009 AVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPVD---------F------KPVRNEAGTSVLVCSRG 1073 (1170)
Q Consensus 1009 ~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~~---------~------~~~~~~~~~~vlv~~~~ 1073 (1170)
.+|+||- .+++|||+|+||++.+|.+. . ..+...+|.+|+|++.+
T Consensus 348 ~g~~~y~--------------------p~vig~s~GieRli~alle~~~~~~~~~~gd~~~gl~~p~~laP~~v~Vip~~ 407 (505)
T 1ati_A 348 ETGKWFV--------------------PYVIEPSAGVDRGVLALLAEAFTREELPNGEERIVLKLKPQLAPIKVAVIPLV 407 (505)
T ss_dssp SSCCEEC--------------------CEEEEEEEEHHHHHHHHHHHHEEEEECTTSCEEEEECCCGGGCSCSEEEEESC
T ss_pred CCCeeec--------------------ceEEEEeeEHHHHHHHHHHHHhhhcccccccccccccCCcccCCceEEEEEcC
Confidence 1566772 13999999999998766521 1 12223467899999986
Q ss_pred CC---ccHHHHHHHHHHHHHcC-CeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCccc---------CCeEEEEEcCC
Q 001059 1074 GG---GLLVERMELVAELWEEN-IKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQ---------KGLVKVRHLDV 1140 (1170)
Q Consensus 1074 ~~---~~~~~a~~ia~~LR~~G-i~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~---------~~~v~vk~l~~ 1140 (1170)
+ .....|.++++.||+.| ++|+++.. +++++++++|++.|+|++|+||++|++ +|+|+||++++
T Consensus 408 -~~~~~~~~~a~~l~~~Lr~~G~i~v~~D~~--~sig~k~~~ad~~g~p~~iivG~~el~~~~~~~~~~~g~V~vr~r~t 484 (505)
T 1ati_A 408 -KNRPEITEYAKRLKARLLALGLGRVLYEDT--GNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKDTVTVRDRDT 484 (505)
T ss_dssp -SSCHHHHHHHHHHHHHHHTTCSSCEEECCC--SCHHHHHHHHHHTTCSEEEEECHHHHTCCTTSCCTTTTEEEEEETTT
T ss_pred -CccHHHHHHHHHHHHHHhccCCEEEEECCC--CCHHHHHHHHHHCCCCEEEEEChHHhhhccccccccCCEEEEEECCC
Confidence 4 57889999999999999 99997654 689999999999999999999999999 99999999999
Q ss_pred CcccccchHHHHHHHHHHHH
Q 001059 1141 KKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1141 ~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
++|..|++++++++|.+.++
T Consensus 485 ~~q~~v~~~el~~~l~~~l~ 504 (505)
T 1ati_A 485 MEQIRLHVDELEGFLRERLR 504 (505)
T ss_dssp CCEEEEEHHHHHHHHHHHHC
T ss_pred CceEEEEHHHHHHHHHHHhc
Confidence 99999999999999987653
|
| >4hvc_A Bifunctional glutamate/proline--tRNA ligase; ligase-ligase inhibitor complex; HET: ANP HFG; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.96 E-value=4.6e-28 Score=290.04 Aligned_cols=328 Identities=8% Similarity=-0.033 Sum_probs=239.8
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc---CCCcccccceEEEeccCCc----eeeecC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL---GDCPQFKRNTVKLLTHGGD----LLELSH 781 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~---~~~~~~~~~my~f~D~~G~----~laLRP 781 (1170)
...+|+.+++|.++.+++.|++.+++.+.++||++|.||.| ++. ++.+.+.++||.|+|.+++ .++|||
T Consensus 48 ~~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~k~sGh~~~f~~emy~~~d~g~~~l~e~l~LrP 127 (519)
T 4hvc_A 48 HDISGCYILRPWAYAIWEAIKDFFDAEIKKLGVENCYFPMFVSQSALEKEKTHVADFAPEVAWVTRSGKTELAEPIAIRP 127 (519)
T ss_dssp CSSTTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTTSCCSCGGGGGGCEEEEEETTEEEEEEEEECS
T ss_pred cCCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHhcccCCcccccccceEEeccCCcccccceeeCC
Confidence 36799999999999999999999999999999999999999 333 3356688999999998754 699999
Q ss_pred CCCHHHHHHHHhC----CCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHH---HHHHHHHHHHc
Q 001059 782 ELRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEV---LKVTMDIVTRF 850 (1170)
Q Consensus 782 D~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEv---i~la~~~l~~l 850 (1170)
+.|++++++++.. +.+|+|+||+|+|||+| +++. |.|||+|.++++|+.....+++|+ +.++.++++.|
T Consensus 128 tse~~i~~~~~~~i~SyrdLPlrl~q~g~~fR~E~~~~~Gl~R~ReF~q~e~h~~~~~~e~a~~E~~~~l~~~~~i~~~l 207 (519)
T 4hvc_A 128 TSETVMYPAYAKWVQSHRDLPIKLNQWCNVVRWEFKHPQPFLRTREFLWQEGHSAFATMEEAAEEVLQILDLYAQVYEEL 207 (519)
T ss_dssp SSHHHHHHHHHHHCSSGGGCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHhhccccccCCeEEEEEcCeeeCCCCCCCCCcceeEEEEeeEEEEecCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999988762 34699999999999998 6554 556799999999888888888875 56778888886
Q ss_pred -CCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHH
Q 001059 851 -FHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVG 929 (1170)
Q Consensus 851 -gi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~ 929 (1170)
|+. +.+...+. .++
T Consensus 208 l~lp--~~~~~~t~--------------------------~e~------------------------------------- 222 (519)
T 4hvc_A 208 LAIP--VVKGRKTE--------------------------KEK------------------------------------- 222 (519)
T ss_dssp SCCC--CEEEECCT--------------------------TTS-------------------------------------
T ss_pred cCCc--ceeeecCC--------------------------ccc-------------------------------------
Confidence 664 44332210 000
Q ss_pred HHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEc---cCCCCCCCcccceEEEEEeccCCCcccccccc
Q 001059 930 LRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYID---ALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1006 (1170)
Q Consensus 930 ~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~D---l~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~ 1006 (1170)
+.|.. ..+.++ ++..|.. -.|++|..-
T Consensus 223 --~~Ga~--------------------------------~t~~iEa~~p~~gr~~--q~gT~~~Lg-------------- 252 (519)
T 4hvc_A 223 --FAGGD--------------------------------YTTTIEAFISASGRAI--QGGTSHHLG-------------- 252 (519)
T ss_dssp --CTTSS--------------------------------EEEEEEEEETTTTEEE--EEEEEEEEE--------------
T ss_pred --cCCch--------------------------------hheeeeeeeccCCCEE--eeccccccc--------------
Confidence 00100 001111 1111211 134444331
Q ss_pred eeccccccchhhhhccccccccc--CCCCCCCCceEEeccHHHHHhhccC------CCCCCCCCCCceEEEEEcCC----
Q 001059 1007 LLAVGGRYDYLLHRMWDREYVGY--ASRTNPPSGVGASLALETIIQHYPV------DFKPVRNEAGTSVLVCSRGG---- 1074 (1170)
Q Consensus 1007 ~I~~GGRYD~L~~~fg~~~~~~~--~g~~~~~pAvGfaiglerL~~~L~~------~~~~~~~~~~~~vlv~~~~~---- 1074 (1170)
+++.++|+-.- ... -|.+..+--.+|+++ +|++.+|.+ +...+...+|.+|+|++++.
T Consensus 253 --------~~~s~~~~i~y-~d~~~~g~~~~vh~~~~Gi~-~R~l~aliE~~~d~~gl~~P~~laP~qV~Iipi~~~~~~ 322 (519)
T 4hvc_A 253 --------QNFSKMFEIVF-EDPKIPGEKQFAYQNSWGLT-TRTIGVMTMVHGDNMGLVLPPRVACVQVVIIPCGITNAL 322 (519)
T ss_dssp --------THHHHHHTCEE-ECTTSTTCEEECEEEEEEEE-THHHHHHHHHHCBTTBCCCCTTTCSCSEEEEECCC---C
T ss_pred --------chhhhhcCcEE-eccccCCCEEEEEEccccHH-HHHHHHHHHHhCccccccccccCCCeEEEEEEecCcccc
Confidence 23333342110 000 111111222366777 999887752 33334456789999999852
Q ss_pred -----CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchH
Q 001059 1075 -----GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRE 1149 (1170)
Q Consensus 1075 -----~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~ 1149 (1170)
+.....|.++++.||+.|++|++++...+++++++++|+..|+|++|+||++|+++|+|+||++++|++..|+++
T Consensus 323 ~~~~~e~~~~~a~~l~~~L~~~Girv~~Ddr~~~s~G~K~~~ael~GiP~~ivIG~kele~g~V~vr~R~tgeq~~v~~~ 402 (519)
T 4hvc_A 323 SEEDKEALIAKCNDYRRRLLSVNIRVRADLRDNYSPGWKFNHWELKGVPIRLEVGPRDMKSCQFVAVRRDTGEKLTVAEN 402 (519)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTTCCEEEEEGG
T ss_pred cchhhHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHhcCCCEEEEECchhhcCCeEEEEECCCCCccceeHH
Confidence 235678999999999999999988774358999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhccC
Q 001059 1150 SLVRFLLDAIASQFRN 1165 (1170)
Q Consensus 1150 ~l~~~l~~~l~~~~~~ 1165 (1170)
++++.|.++|+..++|
T Consensus 403 el~~~l~~ll~~i~~~ 418 (519)
T 4hvc_A 403 EAETKLQAILEDIQVT 418 (519)
T ss_dssp GHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999888776655
|
| >4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-28 Score=301.80 Aligned_cols=187 Identities=18% Similarity=0.157 Sum_probs=133.6
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC--------hhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS--------LPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~--------~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
.....+.|++|.+..++....|+.||||++...... ....+++.+|+++|+++ .|+||+++++++.
T Consensus 238 w~~~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~e----- 312 (569)
T 4azs_A 238 WQNQPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGE----- 312 (569)
T ss_dssp EECC-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEE-----
T ss_pred hhhccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEE-----
Confidence 345678899999999898889999999999754211 12335699999999999 7999999998873
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
+...+|||||||+| +|.+++...+++++. .|+.||+.||+|
T Consensus 313 -----------------------------------d~~~~yLVMEyv~G~~L~d~i~~~~~l~~~---~I~~QIl~AL~y 354 (569)
T 4azs_A 313 -----------------------------------NAQSGWLVMEKLPGRLLSDMLAAGEEIDRE---KILGSLLRSLAA 354 (569)
T ss_dssp -----------------------------------CSSEEEEEEECCCSEEHHHHHHTTCCCCHH---HHHHHHHHHHHH
T ss_pred -----------------------------------ECCEEEEEEecCCCCcHHHHHHhCCCCCHH---HHHHHHHHHHHH
Confidence 35678999999976 999999998888865 478999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|||||||||+||||+.+|.+||+|||+|+...... ...++.+||+.|||||++.+ .+..
T Consensus 355 lH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~---------------~~~~t~vGTp~YmAPE~l~g--~~~~ 417 (569)
T 4azs_A 355 LEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDC---------------SWPTNLVQSFFVFVNELFAE--NKSW 417 (569)
T ss_dssp HHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC------------------CCSHHHHHHHHHHHHHHC--------
T ss_pred HHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCC---------------ccccCceechhhccHHHhCC--CCCC
Confidence 999999999999999999999999999999998653221 12345689999999999987 4678
Q ss_pred cchhHHHHHHHHHhhcC
Q 001059 589 KADMYSLGIVFFELWHP 605 (1170)
Q Consensus 589 ksDIwSlGviL~ELltP 605 (1170)
++|+||+|+++++|+++
T Consensus 418 ~~d~~s~g~~~~~l~~~ 434 (569)
T 4azs_A 418 NGFWRSAPVHPFNLPQP 434 (569)
T ss_dssp -----------CCCCTT
T ss_pred cccccccccchhhhccc
Confidence 89999999999998753
|
| >3ial_A Prolyl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, prors, cysrs, RS, translation, ATP-binding, nucleotide-binding; HET: PR8; 2.20A {Giardia lamblia atcc 50803} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.4e-26 Score=272.14 Aligned_cols=335 Identities=10% Similarity=0.073 Sum_probs=237.5
Q ss_pred cccccCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC---CCcccccceEEEeccC----Cc
Q 001059 707 GTLRLNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG---DCPQFKRNTVKLLTHG----GD 775 (1170)
Q Consensus 707 ~~~~ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~---~~~~~~~~my~f~D~~----G~ 775 (1170)
+-++....+.|+.+|+|.++.+++.|++.+++.+.++||++|.||+| .+.. +.+.+.++||+|.|.+ |+
T Consensus 36 glid~r~~~~G~~~~lP~G~~i~~~L~~~~~~~~~~~Gy~eV~tP~l~~~el~~k~sgh~~~f~~emy~v~d~g~~~~~~ 115 (518)
T 3ial_A 36 ELVDRRYPVKGCVVFRPYGFFMENAIMRLCEEEYAKVGISQILFPTVIPESFLKKESDHIKGFEAECFWVEKGGLQPLEE 115 (518)
T ss_dssp TCEETTSSSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHTSSHHHHHHHGGGCEEEEEETTEEEEE
T ss_pred CCcccCCCCCCeEEECccHHHHHHHHHHHHHHHHHHcCCEEEEcccccCHHHHHhhcCCcccccccEEEEecCCCcccCc
Confidence 33443246799999999999999999999999999999999999999 3322 2456789999999986 68
Q ss_pred eeeecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcC-CCCC---CCCceeEeEEEEeCCCCcccHHHHHHH---HH
Q 001059 776 LLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRA-IGHS---PPNRYLQGDFDIIGGASALTEAEVLKV---TM 844 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e-~~~~---~~~ef~Q~GvEiiG~~~~~aDaEvi~l---a~ 844 (1170)
.++|||+.|++++++++.. +..|+|+||+|+|||+| +++. |.|||+|.++++||.....++.|+..+ +.
T Consensus 116 ~l~LrPt~e~~i~~~~~~~i~SyrdLPlrl~q~~~~fR~E~~~~~GL~R~REF~q~e~h~f~~~~e~a~~e~~~~l~~~~ 195 (518)
T 3ial_A 116 RLALRPTSETAIYSMFSKWVRSYKDLPLKIHQTCTIFRHETKNTKPLIRVREIHWNEAHCCHATAEDAVSQLSDYWKVID 195 (518)
T ss_dssp EEEECSSSHHHHHHHHHHHCCBGGGCCEEEEEEEEEECTTCCSCBTTTBCSEEEEEEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred ceeECCCCcHHHHHHHHhhhcccccCCeEEEEEeceecCCCCCCCCCceeeEEEEeeEEEEECCHHHHHHHHHHHHHHHH
Confidence 9999999999999988762 35699999999999998 5654 556799999999998888888877654 58
Q ss_pred HHH-HHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHH
Q 001059 845 DIV-TRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVN 923 (1170)
Q Consensus 845 ~~l-~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 923 (1170)
+++ +.||+. +.+.. + ++ .++
T Consensus 196 ~i~~~~LGlp--~~~~~--~------------~~------------~e~------------------------------- 216 (518)
T 3ial_A 196 TIFSDELCFK--GQKLR--R------------VC------------WDR------------------------------- 216 (518)
T ss_dssp HHHTTTTCCC--CEEEE--E------------CG------------GGC-------------------------------
T ss_pred HHHHHhcCCc--EEeee--c------------Ch------------hhc-------------------------------
Confidence 888 888885 43221 0 00 000
Q ss_pred HHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCccccc
Q 001059 924 RLQTVGLRFCGAADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLV 1003 (1170)
Q Consensus 924 ~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~ 1003 (1170)
..|. ...+.+|.-+.-|-..-.|++|..
T Consensus 217 --------~~gA--------------------------------~yt~~iE~~~pdgr~ie~gt~~~L------------ 244 (518)
T 3ial_A 217 --------FPGA--------------------------------DYSEVSDVVMPCGRVLQTAGIHNL------------ 244 (518)
T ss_dssp --------CTTC--------------------------------SEEEEEEEECTTSCEEEEEEEEEE------------
T ss_pred --------cCCC--------------------------------ccceEEEEEcCCCCEEEEeceecc------------
Confidence 0010 011222222211211123444322
Q ss_pred ccceeccccccchhhhhcccccccccCCCCCCCCce-EEeccHHHHHhhcc------CCCCCCCCCCCceEEEEEcCCC-
Q 001059 1004 EGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGV-GASLALETIIQHYP------VDFKPVRNEAGTSVLVCSRGGG- 1075 (1170)
Q Consensus 1004 ~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAv-GfaiglerL~~~L~------~~~~~~~~~~~~~vlv~~~~~~- 1075 (1170)
|- ++.++|+-. +...-|... .|-. -++++ +|++.+|. .+...+...+|.+|+|+++...
T Consensus 245 -------g~---~~s~rf~i~-y~d~~g~~~-~~h~~~~G~~-~R~iaaliE~~~de~Gl~lP~~LAP~qV~IiPi~~~~ 311 (518)
T 3ial_A 245 -------GQ---RFSSTFDIL-YANKANESV-HPYLTCAGIS-TRVLACALSIHGDSGGLVLPPLIAPIHVVIIPIGCGK 311 (518)
T ss_dssp -------ET---HHHHHTTCC-EECTTCCEE-CCEEEEEEEE-THHHHHHHHHHCBTTBCCCCGGGCSCSEEEEEESCSC
T ss_pred -------cc---hhhhhcCcE-EECCCCCEe-eeEEeccchH-HHHHHHHHHHhCCCCccccCCccceEEEEEEEeecCc
Confidence 10 223333211 011112222 2221 12233 99987763 1234444578999999998632
Q ss_pred --------ccHHHHHHHHHHHHHc-CCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCc--cc
Q 001059 1076 --------GLLVERMELVAELWEE-NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK--EK 1144 (1170)
Q Consensus 1076 --------~~~~~a~~ia~~LR~~-Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~e--q~ 1144 (1170)
.....|.++++.|++. |++|++++..+.++++++++|+.+|+|++|+||++|+++|+|+|+++++++ +.
T Consensus 312 ~~~~~~~~~~~~~a~~l~~~L~~~~Girv~~Ddr~~~s~G~K~~~ael~GvP~~i~vG~ke~e~g~V~vr~Rd~~~~~k~ 391 (518)
T 3ial_A 312 KNNQESDQQVLGKVNEIADTLKSKLGLRVSIDDDFSKSMGDKLYYYELKGVPLRIEVGQRDLANGQCIVVPRDVGKDQKR 391 (518)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHTTCCCEEECCCTTSCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCGGGCE
T ss_pred cccccchHHHHHHHHHHHHHHHhccCeEEEEECCCCCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcccee
Confidence 3567899999999999 999998776467999999999999999999999999999999999999999 99
Q ss_pred ccchHHH---------------HHHHHHHHHhhccC
Q 001059 1145 EVQRESL---------------VRFLLDAIASQFRN 1165 (1170)
Q Consensus 1145 ~v~~~~l---------------~~~l~~~l~~~~~~ 1165 (1170)
.|+++++ ++.+.++|+..++|
T Consensus 392 ~v~~~el~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 427 (518)
T 3ial_A 392 VIPITEVMKVSSHTTENHELVVKNVIKDELDAYKAR 427 (518)
T ss_dssp EEEHHHHHCCC---------CCCCHHHHHHHHHHHH
T ss_pred EeeHHHHhhhhhhhhhhccccHHHHHHHHHHHHHHH
Confidence 9999999 67777666655543
|
| >3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.8e-23 Score=255.86 Aligned_cols=185 Identities=21% Similarity=0.196 Sum_probs=133.2
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChh------hHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP------VNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~------~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..+.||+|+||+||+|.+ .++.+|+|+...+..... ..+++.+|+.+|++++||||+++..++..
T Consensus 340 ~~~~LG~G~fg~Vy~~~~--~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~------- 410 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY--LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVD------- 410 (540)
T ss_dssp --------CCEEEEEEEC--SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEE-------
T ss_pred CCCEEeeCCCEEEEEEEE--CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEe-------
Confidence 356899999999999944 588999998755432211 13458999999999999999944333321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
....|+|||||+ ++|.+++.. +..++.||+.||+|||+
T Consensus 411 ---------------------------------~~~~~lVmE~~~ggsL~~~l~~--------~~~i~~qi~~aL~~LH~ 449 (540)
T 3en9_A 411 ---------------------------------LDNKRIMMSYINGKLAKDVIED--------NLDIAYKIGEIVGKLHK 449 (540)
T ss_dssp ---------------------------------TTTTEEEEECCCSEEHHHHSTT--------CTHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCccEEEEECCCCCCHHHHHHH--------HHHHHHHHHHHHHHHHH
Confidence 123489999997 699999876 56899999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC-CCCCccc
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW-PKIDEKA 590 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~-~~~~~ks 590 (1170)
+||+||||||+|||++. .+||+|||+|+.......... +......+.+||+.|||||++.+. ..|+..+
T Consensus 450 ~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~~~~--------~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~ 519 (540)
T 3en9_A 450 NDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDEDKAV--------DLIVFKKAVLSTHHEKFDEIWERFLEGYKSVY 519 (540)
T ss_dssp TTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHHHHH--------HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHC
T ss_pred CcCccCCCCHHHEEECC--eEEEEECccCEECCCcccccc--------chhhhhhhhcCCCCcCCHHHHHHHHHHHHHHH
Confidence 99999999999999998 999999999987643211000 000012356899999999998751 2378889
Q ss_pred hhHHHHHHHHHhh
Q 001059 591 DMYSLGIVFFELW 603 (1170)
Q Consensus 591 DIwSlGviL~ELl 603 (1170)
|+||..+-..+..
T Consensus 520 d~ws~vl~~l~~v 532 (540)
T 3en9_A 520 DRWEIILELMKDV 532 (540)
T ss_dssp TTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHH
Confidence 9999887666554
|
| >1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-21 Score=220.39 Aligned_cols=133 Identities=21% Similarity=0.175 Sum_probs=105.6
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----------------hhHHHHHHHHHHHHhccCCCceeE
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----------------PVNDRILREVATLSRLQHQHVVRY 419 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----------------~~~~~~~~Ev~iL~~l~HpnIV~l 419 (1170)
.|.+.+.||+|+||.||+|.+ .+|+.||||+++....+. .....+.+|+.+|+.++| +++
T Consensus 91 ~~~~~~~iG~G~~g~Vy~~~~-~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~~---~~v 166 (282)
T 1zar_A 91 VDAIGKLMGEGKESAVFNCYS-EKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQG---LAV 166 (282)
T ss_dssp CSEEEEEEEECSSEEEEEEEE-TTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTT---SSS
T ss_pred EEEecCEeccCCCceEEEEEe-CCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhccC---CCc
Confidence 456669999999999999999 789999999996432211 134568899999999994 444
Q ss_pred EEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHH
Q 001059 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHL 498 (1170)
Q Consensus 420 ~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i 498 (1170)
++++. ....|+|||||+| +|.+ +. ......+
T Consensus 167 ~~~~~-----------------------------------------~~~~~lvmE~~~g~~L~~-l~------~~~~~~i 198 (282)
T 1zar_A 167 PKVYA-----------------------------------------WEGNAVLMELIDAKELYR-VR------VENPDEV 198 (282)
T ss_dssp CCEEE-----------------------------------------EETTEEEEECCCCEEGGG-CC------CSCHHHH
T ss_pred CeEEe-----------------------------------------ccceEEEEEecCCCcHHH-cc------hhhHHHH
Confidence 44331 1234899999975 8887 42 1235579
Q ss_pred HHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcch
Q 001059 499 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541 (1170)
Q Consensus 499 ~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~ 541 (1170)
+.||+.||.|||++||+||||||+|||++ ++.+||+|||+|+
T Consensus 199 ~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG~a~ 240 (282)
T 1zar_A 199 LDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFPQSV 240 (282)
T ss_dssp HHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCTTCE
T ss_pred HHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECCCCe
Confidence 99999999999999999999999999999 9999999999986
|
| >3ikl_A DNA polymerase subunit gamma-2, mitochondrial; transferase; HET: DNA; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.81 E-value=8.6e-19 Score=205.04 Aligned_cols=310 Identities=15% Similarity=0.053 Sum_probs=199.0
Q ss_pred Cccc-cccchhhhhhhhHHhHHHHHHHH-cC-Cccccccceec---cCCCcccccceEEEeccCCceeeecCCCCHHHHH
Q 001059 716 TSSI-QYSDLDTELRDYVVQVTKEMFRQ-HC-AKHLEIEPMYL---LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIR 789 (1170)
Q Consensus 716 ~G~~-D~lp~e~~~~~~I~~~i~~~f~~-~G-y~~I~tP~~~~---~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR 789 (1170)
.|.. ||.|..+.+++.|++.+++-|.. .| +.+|.||.... +++++.+. ++||| +|+|.+=
T Consensus 93 ~g~~p~~gP~G~~l~~nl~~~w~~~~~~~~~~~~eV~tp~~~~~~~SGH~d~~~-------------~~LRP-eTaqg~~ 158 (459)
T 3ikl_A 93 SGCHPGFGPLGVELRKNLAAEWWTSVVVFREQVFPVDALHHKPGPLLPGDSAFR-------------GGLRE-NLLHGAL 158 (459)
T ss_dssp TTCSCCBCHHHHHHHHHHHHHHHHHHTTSSCSCEECCCCSBCCSCCCSSCSCCT-------------TB-CS-CSHHHHH
T ss_pred cccccccCCcHHHHHHHHHHHHHHHHhhccCceEeeccccccccccCcchhhhc-------------ceECC-CCChhHH
Confidence 3445 99999999999999977777754 66 66699999722 23333333 89999 7777652
Q ss_pred HHH-----hCC-CCceeEEEecCeEEcCC----CC---CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCc
Q 001059 790 WAI-----SNQ-KSSFKRYEISSVYRRAI----GH---SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 790 ~~~-----~~~-~~P~r~~Y~g~VfR~e~----~~---~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~ 854 (1170)
..- .+. ..|++++++|++||+|. +. -|.+||+|..+++|..++...+ ..++..+..+++.||+..
T Consensus 159 ~nfk~~~~s~r~~LP~~iaqig~~FR~E~g~~~~~~GL~RvrEFtq~E~~~F~~Pe~~~e~~~~~~~~~~~~~~~LGi~~ 238 (459)
T 3ikl_A 159 EHYVNCLDLVNKRLPYGLAQIGVCFHPVFDTKQIRNGVKSIGEKTEASLVWFTPPRTSNQWLDFWLRHRLQWWRKFAMSP 238 (459)
T ss_dssp HHTTTTTGGGTTBSSEEEEEEEEEECCC----------CCCCEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHCSSG
T ss_pred HHHhhhhhhccccCCeEEEEEeeeeecccccccCCCCcccccceeeeeEEEEeChhHHHHHHHHHHHHHHHHHHHhCCCh
Confidence 221 122 46999999999999984 22 3567899999999987765433 367777888888888752
Q ss_pred ceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcC
Q 001059 855 SCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCG 934 (1170)
Q Consensus 855 ~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g 934 (1170)
..+.+... . +++ ..+
T Consensus 239 -~~~r~~~~----------~-~ee----------A~~------------------------------------------- 253 (459)
T 3ikl_A 239 -SNFSSSDC----------Q-DEE----------GRK------------------------------------------- 253 (459)
T ss_dssp -GGEEEEEE----------C-CSS----------SSC-------------------------------------------
T ss_pred -hhEEEeec----------C-chH----------HHh-------------------------------------------
Confidence 22222220 0 000 000
Q ss_pred ChhhHHHHHhccCCCChhHHHHHHHHHHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceecccccc
Q 001059 935 AADQALPRLRGALPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014 (1170)
Q Consensus 935 ~~~~~l~~l~~~~~~~~~~~~~l~~L~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRY 1014 (1170)
.+.+...+.-| -+ |++ .++..+-|
T Consensus 254 -----------------------------------~~DiE~~~p~G----~~---E~~--------------g~sn~tDf 277 (459)
T 3ikl_A 254 -----------------------------------GNKLYYNFPWG----KE---LIE--------------TLWNLGDH 277 (459)
T ss_dssp -----------------------------------EEEEEEECSSC----EE---EEE--------------EEEEEETH
T ss_pred -----------------------------------hcCeEEEcCCc----eE---EEe--------------eeeccchh
Confidence 01011010000 00 111 11111122
Q ss_pred chhh--hhcccccccccCCCCCCCC-ceEEeccHHHHH-hhccC-----C-------------CCCCCCCCCceEEEEEc
Q 001059 1015 DYLL--HRMWDREYVGYASRTNPPS-GVGASLALETII-QHYPV-----D-------------FKPVRNEAGTSVLVCSR 1072 (1170)
Q Consensus 1015 D~L~--~~fg~~~~~~~~g~~~~~p-AvGfaiglerL~-~~L~~-----~-------------~~~~~~~~~~~vlv~~~ 1072 (1170)
|-.- ..++- .+...-|.++.+| .+.-++|++|++ ++|++ + +..+...+|.+|.|+ .
T Consensus 278 qL~~~~~~~~~-~~~~~dg~~k~~P~vi~~s~Gv~R~~~AiLe~~~de~~~~~~~~~~~~R~vl~lP~~LAP~qV~Ii-i 355 (459)
T 3ikl_A 278 ELLHMYPGNVS-KLHGRDGRKNVVPCVLSVNGDLDRGMLAYLYDSFQLTENSFTRKKNLHRKVLKLHPCLAPIKVALD-V 355 (459)
T ss_dssp HHHHHSCSCSS-SSCCBSSSCBCCCEEEEEEEEHHHHHHHHHHTTCC-------------CCCCCCCTTTCSCCEEEE-E
T ss_pred hhhccccccCc-eeEccCCCeeeeeEEEEecccHHHHHHHHHHHHhhhccccccccccccceEEEeCcccCCceEEEE-e
Confidence 1100 00000 0000112222234 447789999974 55542 1 233345678898888 5
Q ss_pred CC---CccHHHHHHHHHHHHHcCCeEEEeeCC--CCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccc
Q 001059 1073 GG---GGLLVERMELVAELWEENIKAQFVPVP--DPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQ 1147 (1170)
Q Consensus 1073 ~~---~~~~~~a~~ia~~LR~~Gi~v~~~~~~--~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~ 1147 (1170)
.. +.....|.++++.||+.|++|++++.. +.+++++|++|++.|+||+|+||++|+++|+|+||++++++|..|+
T Consensus 356 ~~~~~e~~~~~A~~L~~~Lr~~GIrV~~d~Ddr~~~siGkK~r~Ad~iGiPy~IiVG~kEle~g~VtVR~Rdtgeq~~v~ 435 (459)
T 3ikl_A 356 GRGPTLELRQVCQGLFNELLENGISVWPGYLETMQSSLEQLYSKYDEMSILFTVLVTETTLENGLIHLRSRDTTMKEMMH 435 (459)
T ss_dssp SSCCSTTHHHHHHHHHHHHHHTSCCEECGGGSSSCCTTHHHHHHHGGGTCSEEEEECTTSTTSSEEEEEETTTCCCCCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCCeEEEeecCCcCCCHHHHHHHHHHcCCCEEEEECchhhhCCEEEEEECCCCceEEEE
Confidence 32 567899999999999999999842322 4789999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhh
Q 001059 1148 RESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1148 ~~~l~~~l~~~l~~~ 1162 (1170)
+++++++|.+.+++.
T Consensus 436 ldeli~~l~~~i~~~ 450 (459)
T 3ikl_A 436 ISKLKDFLIKYISSA 450 (459)
T ss_dssp TTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhc
Confidence 999999999888654
|
| >1g5h_A Mitochondrial DNA polymerase accessory subunit; intermolecular four helix bundle, DNA binding protein; 1.95A {Mus musculus} SCOP: c.51.1.1 d.104.1.1 PDB: 1g5i_A 2g4c_A* 3ikm_B* | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-20 Score=221.02 Aligned_cols=126 Identities=21% Similarity=0.162 Sum_probs=102.9
Q ss_pred CCce-EEeccHHHHH-hhccCC----------C--------CCCCCCCCceEEEE-EcCC-CccHHHHHHHHHHHHHcCC
Q 001059 1036 PSGV-GASLALETII-QHYPVD----------F--------KPVRNEAGTSVLVC-SRGG-GGLLVERMELVAELWEENI 1093 (1170)
Q Consensus 1036 ~pAv-GfaiglerL~-~~L~~~----------~--------~~~~~~~~~~vlv~-~~~~-~~~~~~a~~ia~~LR~~Gi 1093 (1170)
+|.| +.++|++|++ ++|+++ . ..+...+|.+|+|+ +.+. +....+|.++++.||+.|+
T Consensus 290 ~P~vi~~s~Gv~R~i~aile~~~~~~~~~~~~g~d~~r~~l~~P~~lAP~qV~Ii~~~~~~e~~~~~A~~l~~~Lr~~Gi 369 (454)
T 1g5h_A 290 VPCVLSVSGDVDLGTLAYLYDSFQLAENSFARKKSLQRKVLKLHPCLAPIKVALDVGKGPTVELRQVCQGLLNELLENGI 369 (454)
T ss_dssp CCEEEEEEEEHHHHHHHHHHHHEEC------------CCEECCCTTTCSCCEEEEECSSCHHHHHHHHHHHHHHHHHTTC
T ss_pred eeEEEeCcccHHHHHHHHHHHhcchhhcccccCCcccceeEecCcccCCCeEEEEEeCCCcHHHHHHHHHHHHHHHHCCC
Confidence 5666 8899999996 555411 1 22334678899998 5521 3468899999999999999
Q ss_pred eEE--EeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcccccchHHHHHHHHHHHHh
Q 001059 1094 KAQ--FVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKEKEVQRESLVRFLLDAIAS 1161 (1170)
Q Consensus 1094 ~v~--~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq~~v~~~~l~~~l~~~l~~ 1161 (1170)
+|+ ++...+.++++++++|++.|+|++|+||++|+++|+|+||++++++|..|+++++++.|.+.++.
T Consensus 370 ~v~~~~Ddr~~~sigkk~r~Ad~~GiP~~IiVG~~Ele~g~VtvR~r~t~eq~~v~l~el~~~l~~~l~~ 439 (454)
T 1g5h_A 370 SVWPGYSETVHSSLEQLHSKYDEMSVLFSVLVTETTLENGLIQLRSRDTTMKEMMHISKLRDFLVKYLAS 439 (454)
T ss_dssp CEEEGGGSCCCSCHHHHHHHHHHTTCSEEEEECHHHHHHCEEEEEETTTCCEEEEETTSHHHHHHHHHHH
T ss_pred EEEEEecCCCCCCHHHHHHHHHHcCCCEEEEECcchhhCCEEEEEECCCCcEEEEEHHHHHHHHHHHHhc
Confidence 996 44322568999999999999999999999999999999999999999999999999999887753
|
| >1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=1.7e-18 Score=191.83 Aligned_cols=138 Identities=22% Similarity=0.254 Sum_probs=108.0
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCCh----------------------hhHHHHHHHHHHHHhcc
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSL----------------------PVNDRILREVATLSRLQ 412 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~--vAVK~i~~~~~~~----------------------~~~~~~~~Ev~iL~~l~ 412 (1170)
|++.+.||+|+||.||+|.+..+|+. ||||+++...... .....+.+|+..|+.+.
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 67889999999999999999778999 9999976432110 11236789999999999
Q ss_pred CCCc--eeEEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC--C----cHHHHH
Q 001059 413 HQHV--VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP--R----TLRQVF 484 (1170)
Q Consensus 413 HpnI--V~l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~--g----sL~~~l 484 (1170)
|++| +.++.. ...++|||||+ | +|.+..
T Consensus 129 ~~~i~~p~~~~~--------------------------------------------~~~~lVmE~~g~~g~~~~~L~~~~ 164 (258)
T 1zth_A 129 EAGVSVPQPYTY--------------------------------------------MKNVLLMEFIGEDELPAPTLVELG 164 (258)
T ss_dssp HTTCCCCCEEEE--------------------------------------------ETTEEEEECCEETTEECCBHHHHG
T ss_pred hCCCCCCeEEEc--------------------------------------------CCCEEEEEecCCCCCccccHHHHh
Confidence 9875 223211 12379999995 3 676654
Q ss_pred HhcCCCCHHHHHHHHHHHHHHHHHHH-hCCccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 485 ESYDHFDKELAWHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 485 ~~~~~l~e~~~~~i~~qI~~gL~yLH-s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
.. .++..+..++.||+.||.||| ++||+||||||+|||++. .++|+|||+|...
T Consensus 165 ~~---~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~~--~~~liDFG~a~~~ 219 (258)
T 1zth_A 165 RE---LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYID--KVYFIDMGQAVTL 219 (258)
T ss_dssp GG---GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEESS--SEEECCCTTCEET
T ss_pred hc---cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEcC--cEEEEECcccccC
Confidence 32 235567889999999999999 999999999999999988 9999999999753
|
| >4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A | Back alignment and structure |
|---|
Probab=99.56 E-value=4.7e-15 Score=171.94 Aligned_cols=134 Identities=18% Similarity=0.213 Sum_probs=94.6
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC------------hhhHHHH--------HHHHHHHHhccCCCc
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS------------LPVNDRI--------LREVATLSRLQHQHV 416 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~------------~~~~~~~--------~~Ev~iL~~l~HpnI 416 (1170)
|++...||.|+||.||+|.+. +|+.||||+++....+ ....... .+|+..|.++.++++
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~-~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADE-KGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECT-TCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEecCEeeeCCceEEEEEECC-CCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 899999999999999999986 7999999998642111 0001111 245555555544333
Q ss_pred ee--EEEEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHH
Q 001059 417 VR--YYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKE 493 (1170)
Q Consensus 417 V~--l~~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~ 493 (1170)
.. .+.+ ...+|||||++| .|.++. ..+
T Consensus 176 ~vp~p~~~--------------------------------------------~~~~LVME~i~G~~L~~l~------~~~ 205 (397)
T 4gyi_A 176 PVPEPIAQ--------------------------------------------SRHTIVMSLVDALPMRQVS------SVP 205 (397)
T ss_dssp SCCCEEEE--------------------------------------------ETTEEEEECCSCEEGGGCC------CCS
T ss_pred CCCeeeec--------------------------------------------cCceEEEEecCCccHhhhc------ccH
Confidence 21 1100 112799999987 554432 223
Q ss_pred HHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCC----------CEEEeecCcch
Q 001059 494 LAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN----------DIKIGDFGLAK 541 (1170)
Q Consensus 494 ~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~----------~vKL~DFGlA~ 541 (1170)
.+..++.||+.+|.|||++|||||||||.|||++.++ .+.|+||+-+.
T Consensus 206 ~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~iID~~Q~V 263 (397)
T 4gyi_A 206 DPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPIIIXFPQMV 263 (397)
T ss_dssp CHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEEECCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceEEEEeCCcc
Confidence 4567889999999999999999999999999998776 38899999765
|
| >2dq3_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, nationa on protein structural and functional analyses; HET: SSA; 3.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.52 E-value=1.5e-14 Score=170.15 Aligned_cols=143 Identities=13% Similarity=0.146 Sum_probs=120.6
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+.+|+|..+.+++.|++.+++.+.++||++|.||.| .+ .++.+.+.++||++. ++.++|||+.|+|++
T Consensus 161 g~G~~~~~p~ga~l~~~L~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~---~~~l~LrPt~e~~i~ 237 (425)
T 2dq3_A 161 GSRFTVIAGWGARLERALINFMLDLHTKKGYKEICPPHLVKPEILIGTGQLPKFEEDLYKCE---RDNLYLIPTAEVPLT 237 (425)
T ss_dssp CSSCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHSCTTTTGGGSCBCT---TTCCEECSSTHHHHH
T ss_pred CCCceEECcHHHHHHHHHHHHHHHHHHHcCCEEEECCccccHHHHHhcCCCCcChhhheEec---CCeEEEcCCCcHHHH
Confidence 589999999999999999999999999999999999999 22 233456788999986 478999999999999
Q ss_pred HHHHhC----CCCceeEEEecCeEEcCCCCC--------CCCceeEeEEEEeCCCCc--ccHHHHHHHHHHHHHHcCCCc
Q 001059 789 RWAISN----QKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASA--LTEAEVLKVTMDIVTRFFHAE 854 (1170)
Q Consensus 789 R~~~~~----~~~P~r~~Y~g~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~--~aDaEvi~la~~~l~~lgi~~ 854 (1170)
++++.. ...|+|+||+|+|||+|.++. |.+||+|+++++|+.++. ....|++.++.++|+.||+.
T Consensus 238 ~~~~~~i~s~~~LPlrl~~~g~~FR~E~~~~Gr~~~Gl~R~reF~q~E~~~f~~pe~s~~~~~e~i~~~~~il~~LGL~- 316 (425)
T 2dq3_A 238 NLYREEILKEENLPIYLTAYTPCYRREAGAYGKDIRGIIRQHQFDKVELVKIVHPDTSYDELEKLVKDAEEVLQLLGLP- 316 (425)
T ss_dssp GGGTTEEEETTTCCEEEEEEEEEECCCCSCCSSSCSSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred HHHHhhccccccCCeEEEEecCEecCCCCcccccccCcccccceEEeeEEEECCHHHHHHHHHHHHHHHHHHHHHCCCc-
Confidence 988763 356999999999999988542 445799999999998764 23479999999999999996
Q ss_pred ceE-EEeCc
Q 001059 855 SCD-IHLNH 862 (1170)
Q Consensus 855 ~~~-i~lg~ 862 (1170)
+. +.+..
T Consensus 317 -~rvv~l~~ 324 (425)
T 2dq3_A 317 -YRVVELCT 324 (425)
T ss_dssp -EEEEECCT
T ss_pred -eEEEEecC
Confidence 65 55554
|
| >1nnh_A Asparaginyl-tRNA synthetase-related peptide; structural genomics, PSI, protein structure initiative, southeast COLL for structural genomics; 1.65A {Pyrococcus furiosus} SCOP: d.104.1.1 PDB: 3p8t_A 3p8v_A 3p8y_A 3reu_A* 3rex_A* 3rl6_A* | Back alignment and structure |
|---|
Probab=99.44 E-value=8.4e-14 Score=156.39 Aligned_cols=120 Identities=13% Similarity=0.112 Sum_probs=89.0
Q ss_pred cchhhhhhhhHHhHHHHHHHHcCCccccccceecc-----C--CCcccccceEEEeccCCceeeecCCCCHHHHHHHHhC
Q 001059 722 SDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLL-----G--DCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN 794 (1170)
Q Consensus 722 lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~-----~--~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~ 794 (1170)
.....+++..+.+.++++|.++||.+|+||+|... . .++. .++|.+. ..|+.+.||..-.....+.++ .
T Consensus 11 ~~~~~~~rs~i~~~ir~~f~~~GF~EVeTP~l~~~~~~~~~~~~~e~--a~~f~~~-~~~~~~~L~~Spe~~~~~l~~-~ 86 (294)
T 1nnh_A 11 ISPTLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEG--MEPAEVE-IYGVKMRLTHSMILHKQLAIA-M 86 (294)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTCEEECCCCEESCCCCCCSCTTCCC--CCCCEEE-ETTEEEEECSCSHHHHHHHHH-T
T ss_pred hHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEccchhccCCCCCc--ceeEEEE-cCCCCEEeccChHHHHHHHhh-c
Confidence 34567889999999999999999999999999433 1 2222 6677753 335677887422222333333 1
Q ss_pred CCCceeEEEecCeEEcCCCCC---CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcC
Q 001059 795 QKSSFKRYEISSVYRRAIGHS---PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRFF 851 (1170)
Q Consensus 795 ~~~P~r~~Y~g~VfR~e~~~~---~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lg 851 (1170)
.+.|+||+|+|||+|+||. +.+ ||+|+++|++|.+ +.|++.++.++++.++
T Consensus 87 --g~~rvf~ig~~FR~E~pq~~~~RH~~EFtqle~e~~~~~----~~~l~~~~e~l~~~l~ 141 (294)
T 1nnh_A 87 --GLKKIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAK----MEDIMRLIERLVYGLF 141 (294)
T ss_dssp --TCCEEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHHH
T ss_pred --CccceEEEEccEeCCCCCCCCCccccceeEEEEEecCCC----HHHHHHHHHHHHHHHH
Confidence 3789999999999999663 444 7999999999974 7899999999988764
|
| >2dq0_A Seryl-tRNA synthetase; coiled-coil, homodimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: SSA; 2.60A {Pyrococcus horikoshii} PDB: 2dq1_A* 2dq2_A 2zr2_A* 2zr3_A | Back alignment and structure |
|---|
Probab=99.39 E-value=5.3e-13 Score=157.91 Aligned_cols=144 Identities=8% Similarity=0.033 Sum_probs=118.9
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccC--CCcccccceEEEeccCCceeeecCCCCHHH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLG--DCPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~--~~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
...|+.+|+|..+.+++.|++.+++.+.++||++|.||.| .+.+ +.+.+.++||++.| +.++|||+.|+++
T Consensus 181 ~g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~LrPt~e~~~ 257 (455)
T 2dq0_A 181 SGSRFYYLLNEIVILDLALIRFALDRLIEKGFTPVIPPYMVRRFVEEGSTSFEDFEDVIYKVED---EDLYLIPTAEHPL 257 (455)
T ss_dssp TCTTCCEEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHTTSCTTHHHHTCCBBTT---SSCEECSSTHHHH
T ss_pred cCCCeEEECCHHHHHHHHHHHHHHHHHHHcCCEEEeCCcccCHHHHHhcCCCCCChHhhCeecC---CcEEEcCcCcHHH
Confidence 3579999999999999999999999999999999999999 3333 34557889999865 6899999999999
Q ss_pred HHHHHh----CCCCceeEEEecCeEEcCCCCC--------CCCceeEeEEEEeCCCCcc--cHHHHHHHHHHHHHHcCCC
Q 001059 788 IRWAIS----NQKSSFKRYEISSVYRRAIGHS--------PPNRYLQGDFDIIGGASAL--TEAEVLKVTMDIVTRFFHA 853 (1170)
Q Consensus 788 aR~~~~----~~~~P~r~~Y~g~VfR~e~~~~--------~~~ef~Q~GvEiiG~~~~~--aDaEvi~la~~~l~~lgi~ 853 (1170)
++++.. +...|+|+|++|+|||+|.++. |.++|+|+.+.+|+.+... .-.|++.++.++++.||+.
T Consensus 258 ~~~~~~~~~s~~~LPlr~~~~g~~FR~E~~~~G~~~~GL~R~rqF~kvE~~~f~~pe~s~~~~~e~l~~~~~il~~LGL~ 337 (455)
T 2dq0_A 258 AGMHANEILDGKDLPLLYVGVSPCFRKEAGTAGKDTKGIFRVHQFHKVEQFVYSRPEESWEWHEKIIRNAEELFQELEIP 337 (455)
T ss_dssp HHTTTTEEEETTTCSEEEEEEEEEECCCTTCSSCSCCSSSSCSEEEEEEEEEEECTTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhCccCchhCCEEEEEecCcccCCCCccccccCCceeeeeeEeeeEEEecCHHHHHHHHHHHHHHHHHHHHHcCCc
Confidence 998876 3457999999999999998754 4567999888888876321 1239999999999999995
Q ss_pred cceEEEeCc
Q 001059 854 ESCDIHLNH 862 (1170)
Q Consensus 854 ~~~~i~lg~ 862 (1170)
+.+....
T Consensus 338 --yrv~~~~ 344 (455)
T 2dq0_A 338 --YRVVNIC 344 (455)
T ss_dssp --EEEEECC
T ss_pred --eEEEECC
Confidence 6665554
|
| >1ses_A Seryl-tRNA synthetase; ligase; HET: AHX AMP; 2.50A {Thermus thermophilus} SCOP: a.2.7.1 d.104.1.1 PDB: 1ser_A* 1set_A* 1sry_A | Back alignment and structure |
|---|
Probab=99.37 E-value=8.5e-13 Score=154.97 Aligned_cols=143 Identities=8% Similarity=0.099 Sum_probs=118.3
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+.+|+|..+.+++.|++.+++.+.++||++|.||.| .+ .++.+.+.++||++.| +.++|||..|++++
T Consensus 155 g~G~~~~~p~ga~l~~aL~~~~~~~~~~~Gy~ev~tP~l~~~~l~~~sG~~~~f~~emy~~~d---~~l~L~Pt~e~~~~ 231 (421)
T 1ses_A 155 GSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLN 231 (421)
T ss_dssp CSSCCCEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBBTT---SSEEECSSTHHHHH
T ss_pred CCCeEEECcHHHHHHHHHHHHHHHHHHHcCCEEEeCCceecHHHHHhcCCCCcCchhcEEEcC---CeEEEeecCcHHHH
Confidence 479999999999999999999999999999999999999 22 2345667899999875 78999999999999
Q ss_pred HHHHhC----CCCceeEEEecCeEEcC-----CCCC---CCCceeEeEEEEeCCCC-cccHH---HHHHHHHHHHHHcCC
Q 001059 789 RWAISN----QKSSFKRYEISSVYRRA-----IGHS---PPNRYLQGDFDIIGGAS-ALTEA---EVLKVTMDIVTRFFH 852 (1170)
Q Consensus 789 R~~~~~----~~~P~r~~Y~g~VfR~e-----~~~~---~~~ef~Q~GvEiiG~~~-~~aDa---Evi~la~~~l~~lgi 852 (1170)
+++... ...|+|+||+|+|||+| +|+. |.++|+|+++..|+.++ ..++. |++.++.++|+.||+
T Consensus 232 ~~~~~~~~s~~~LPlr~~~~g~~FR~E~g~~Gr~~~GL~R~rqF~q~E~~~f~~p~~e~s~~~~~e~~~~~~~il~~LGL 311 (421)
T 1ses_A 232 ALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLEL 311 (421)
T ss_dssp HTTTTCEEEGGGCSEEEEEEEEEECCCCSCCCSCCCTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHhcccccCchhCCEEEEecCCeecCCccccCcCCCCCeeeeeeeeeeEEEEeCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 988763 24699999999999999 5554 45569999888888762 24443 999999999999999
Q ss_pred CcceE-EEeCc
Q 001059 853 AESCD-IHLNH 862 (1170)
Q Consensus 853 ~~~~~-i~lg~ 862 (1170)
. +. +.+..
T Consensus 312 ~--~rvv~l~t 320 (421)
T 1ses_A 312 P--YRLVEVAT 320 (421)
T ss_dssp C--EEEEECCH
T ss_pred c--eEEEEecC
Confidence 6 55 44443
|
| >3dsq_A Pyrrolysyl-tRNA synthetase; homodimer, aminoacyl-tRNA synthetase, ligase; 2.10A {Desulfitobacterium hafniense} PDB: 2znj_A 2zni_A | Back alignment and structure |
|---|
Probab=99.33 E-value=1.7e-12 Score=145.10 Aligned_cols=130 Identities=8% Similarity=-0.035 Sum_probs=101.8
Q ss_pred hhhHHhHHHHHHHHcCCcccccccee----ccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHh---CCCCceeE
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMY----LLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAIS---NQKSSFKR 801 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~----~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~---~~~~P~r~ 801 (1170)
.+.+++.++++|..+||++|.||.|+ +...+....++||++.++.++.++|||.++++..+.+.. ++..|+|+
T Consensus 73 ~~~l~~~ir~~~~~~Gf~EV~tP~Le~~~l~~~~g~~~~~~m~~~~npl~e~~~LRp~l~p~l~~~~r~~~~~~~~Plrl 152 (288)
T 3dsq_A 73 LLELEEKLAKALHQQGFVQVVTPTIITKSALAKMTIGEDHPLFSQVFWLDGKKCLRPMLAPNLYTLWRELERLWDKPIRI 152 (288)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHHTTSSCC--CCTTTSCEEETTEEECSCSHHHHHHHHHHHTTTSCSCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEECCeeecHHHHhhcCCCcccccEEeecccccchhhhhcChHHHHHHHHHHHhCCCCCEEE
Confidence 46899999999999999999999992 222222112357766655557789999999887765544 24569999
Q ss_pred EEecCeEEcCCCC-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 802 YEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
|++|+|||+|.++ .+.+||+|++++++|..+...++|++.++.+++++||+++ +.+.
T Consensus 153 feiG~vFR~E~~~~~r~~EF~qle~~i~g~~~~~~f~elkg~le~ll~~LGl~~-~~~~ 210 (288)
T 3dsq_A 153 FEIGTCYRKESQGAQHLNEFTMLNLTELGTPLEERHQRLEDMARWVLEAAGIRE-FELV 210 (288)
T ss_dssp EEEEEEECSCCSSSCCCSEEEEEEEEEETCCGGGHHHHHHHHHHHHHHHHTCCC-CEEE
T ss_pred EEEeeEEecCCCCCCcCccEEEEEEEEEcCCchhhHHHHHHHHHHHHHHcCCCC-cEEe
Confidence 9999999998765 4456899999999999888889999999999999999964 5543
|
| >2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.6e-13 Score=130.87 Aligned_cols=75 Identities=39% Similarity=0.473 Sum_probs=70.2
Q ss_pred CCccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhhCCCCC
Q 001059 5 DLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLGQ 81 (1170)
Q Consensus 5 ~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~~~~~~ 81 (1170)
++.+.+.|.|+||++||+++|.+.|.+.++|++.++..|.+.|.+++++|+ ||+|||+||+.+||||++++++-+
T Consensus 52 ~~~~~~~L~v~~p~~YP~~~P~i~l~~~~~l~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~lqe~l~e~~~~~~ 126 (128)
T 2ebm_A 52 DETVQTTLKFTYSEKYPDEAPLYEIFSQENLEDNDVSDILKLLALQAEENL--GMVMIFTLVTAVQEKLNEIVDQIK 126 (128)
T ss_dssp SCCCBEEEEEECCSSTTTSCCEEEEEEESSCCHHHHHHHHHHHHHHHHHHT--TSCCHHHHHHHHHHHHHHHHHHGG
T ss_pred cCceeEEEEEEeCCCCCCCCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhC--CCEEHHHHHHHHHHHHHHHHHHHh
Confidence 356899999999999999999999999899999999999999999999999 999999999999999999876543
|
| >2cja_A Seryl-tRNA synthetase; ligase, zinc ION; HET: MSE ATP; 2.2A {Methanosarcina barkeri} PDB: 2cim_A* 2cj9_A* 2cjb_A | Back alignment and structure |
|---|
Probab=99.29 E-value=1.6e-12 Score=155.16 Aligned_cols=139 Identities=6% Similarity=0.036 Sum_probs=116.1
Q ss_pred CCCccccccchhhhhhhhHHhHHHH-HHHHcCCccccccce----ec--cCCCcccccceEEEe-----c----------
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKE-MFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLL-----T---------- 771 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~-~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~-----D---------- 771 (1170)
...|+.+|+|..+.+++.|++.+++ ++.++||++|.||+| .+ .++.+.+.++||++. |
T Consensus 219 ~~~G~y~~~P~G~~L~~~L~~~~~~e~~~~~G~~EV~tP~L~~~el~~~SGh~~~F~demy~v~~~~~Rd~~~~e~~~~~ 298 (522)
T 2cja_A 219 SSRGQWIHGPQSARIFRTFEKIVLEELLEPLGYREMIFPKLVTWEVWMKSGHAKGVYPEIYYVCPPQTRDPDYWEEVADY 298 (522)
T ss_dssp SSTTCEEECHHHHHHHHHHHHHHHHHTHHHHTCEECBCCSEEEHHHHHHHTGGGTCGGGCCEEECBSCCCHHHHHHHHHH
T ss_pred CCCCeEEECchHHHHHHHHHHHHHHHHHHHcCCEEEECCCcccHHHHhhcCCcCccccceeeeecCCccchhhhhhhhhh
Confidence 6799999999999999999999996 589999999999999 22 234667789999995 3
Q ss_pred ---------------cCCceeeecCCCCHHHHHHHHhC----CCCceeEEE-ecCeEEcCCCC-----CCCCceeEeEEE
Q 001059 772 ---------------HGGDLLELSHELRLPFIRWAISN----QKSSFKRYE-ISSVYRRAIGH-----SPPNRYLQGDFD 826 (1170)
Q Consensus 772 ---------------~~G~~laLRPD~T~~iaR~~~~~----~~~P~r~~Y-~g~VfR~e~~~-----~~~~ef~Q~GvE 826 (1170)
.+++.++|||+.++++++++... ...|+|+|| +|++||+| ++ .|.+||+|.+++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~l~LrPt~e~~i~~~f~~~i~s~~~LPlrl~q~ig~~FR~E-pgs~~GL~R~REF~q~E~~ 377 (522)
T 2cja_A 299 YKVTHEVPTKLIKEKIAEPIGGMCYAQCPPFWMYVAGETLPNEEIPVKVFDRSGTSHRYE-SGGIHGIERVDEFHRIEIV 377 (522)
T ss_dssp HHHHSSCCHHHHHHHBCCCCEEECSSSSGGGGGGTTTCEECGGGCSEEEEECSSEEECCC-SSSCCCTTSCSEEEEEEEE
T ss_pred hhccccccccccccccCCCcEEEccCCcHHHHHHHHhcccccccCCeeEEEEcCceEeCC-CCCCCCCeEeEEEEEeeEE
Confidence 14689999999999999887642 346999999 99999999 66 466789999999
Q ss_pred EeCCCCcccH--HHHH-HHHHHHHHHcCCC
Q 001059 827 IIGGASALTE--AEVL-KVTMDIVTRFFHA 853 (1170)
Q Consensus 827 iiG~~~~~aD--aEvi-~la~~~l~~lgi~ 853 (1170)
+||.++...+ .+++ ..+..+++.||+.
T Consensus 378 ~F~~pe~s~ee~ee~i~~~~~~~l~~LGLp 407 (522)
T 2cja_A 378 WIGTKEEVLKCAEELHDRYMHIFNDILDIE 407 (522)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHHHHTSCCC
T ss_pred EEeChHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9997654332 4678 8889999999996
|
| >2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A | Back alignment and structure |
|---|
Probab=99.27 E-value=2.7e-12 Score=126.47 Aligned_cols=68 Identities=26% Similarity=0.490 Sum_probs=65.5
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhh
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEI 76 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~ 76 (1170)
.+.+.|.|+||++||+++|.+.+...++|++.++..|.+.|.+++++|+ ||+|||+||+.+||||.+.
T Consensus 58 ~~~~~L~~~~p~~YP~~~P~i~~~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~lqe~l~~~ 125 (128)
T 2day_A 58 YVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTAMLYELIEKGKEILSGP 125 (128)
T ss_dssp CCEEEEEEEECSSTTSSCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT--TSCCHHHHHHHHHHHHCCC
T ss_pred ceeEEEEEEcCCCCCCCCCCeEEEcCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhHHHHHHHHHHHHhc
Confidence 5899999999999999999999999999999999999999999999999 9999999999999999763
|
| >2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.6e-12 Score=127.26 Aligned_cols=68 Identities=25% Similarity=0.418 Sum_probs=66.5
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhh
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEI 76 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~ 76 (1170)
.+.++|.|+||++||+++|.+.|.+.+||++.++..|.+.|.+++++|+ ||+|||+||+.+||||+++
T Consensus 61 ~~~~~L~~~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~lqe~l~~~ 128 (138)
T 2yz0_A 61 ESSITLHFAMTPMYPYTAPEIEFKNVQNVMDSQLQMLKSEFKKIHNTSR--GQEIIFEITSFTQEKLDEF 128 (138)
T ss_dssp CCEEEEEEECCSSTTSSCCEEEEECCCSCCSHHHHHHHHHHHHHHHHST--TSCCHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEECCCCCCCCCCeEEEecCCCCCHHHHHHHHHHHHHHHHHhC--CCEEHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999999999999999999999 9999999999999999998
|
| >1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3 | Back alignment and structure |
|---|
Probab=99.23 E-value=4.6e-12 Score=126.30 Aligned_cols=72 Identities=36% Similarity=0.576 Sum_probs=68.4
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhhCCCC
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLG 80 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~~~~~ 80 (1170)
.+.+.|.|+||++||+++|.+.+...++|++.++..|.+.|.+++++|+ ||+|||+||+.+||||+++..+.
T Consensus 62 ~~~~~L~v~~p~~YP~~~P~i~l~~~~~L~~~~~~~L~~~L~~~~~e~~--G~~mif~lv~~lqe~l~~~~~p~ 133 (137)
T 1ukx_A 62 YVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC--GEVMIFELAHHVQSFLSEHNKSG 133 (137)
T ss_dssp SCEEEEEECCCTTTTSSCCCCEEEEEESSSSSHHHHHHHHHHHHHHHHT--TSCCHHHHHHHHHHHHHHHCCCC
T ss_pred ceEEEEEEECCCCCCCCCCcEEEecCCCCCHHHHHHHHHHHHHHHHHhC--CCEEhHHHHHHHHHHHHhcCCCC
Confidence 5899999999999999999999988899999999999999999999999 99999999999999999987653
|
| >2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.22 E-value=4e-12 Score=125.22 Aligned_cols=72 Identities=25% Similarity=0.265 Sum_probs=67.4
Q ss_pred CccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhhCCCC
Q 001059 6 LDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLG 80 (1170)
Q Consensus 6 ~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~~~~~ 80 (1170)
..+.+.|.|+||++||+++|.+.|. .++|++.++..|.+.|.+++++|+ ||+|||+||+.+||||++++..-
T Consensus 54 ~~~~~~L~~~~p~~YP~~~P~i~l~-~~~L~~~~~~~l~~~L~~~~~e~~--G~~mif~lv~~lqe~l~~~~~~p 125 (128)
T 2ebk_A 54 ADIPLELVFHLPVNYPSCLPGISIN-SEQLTRAQCVTVKEKLLEQAESLL--SEPMVHELVLWIQQNLRHILSQP 125 (128)
T ss_dssp CCCEEEEEEEECSSTTSSCCCCCCC-CSSSCHHHHHHHHHHHHHHHHHTT--TSCHHHHHHHHHTTSHHHHHCCC
T ss_pred CCeEEEEEEECCCCCCCCCCeEEEE-hhhCCHHHHHHHHHHHHHHHHHhC--CcchHHHHHHHHHHHHHHHHhCc
Confidence 3579999999999999999999998 589999999999999999999999 99999999999999999987643
|
| >3vbb_A Seryl-tRNA synthetase, cytoplasmic; coiled-coil, ligase; 2.89A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.14 E-value=1.1e-10 Score=138.40 Aligned_cols=143 Identities=10% Similarity=0.086 Sum_probs=114.1
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccC--------Cceeeec
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHG--------GDLLELS 780 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~--------G~~laLR 780 (1170)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| .+ .++.+.+.++||++.|.+ ++.++|+
T Consensus 190 Gsgfy~l~p~GarL~raL~~f~~d~~~~~Gy~EV~~P~lv~~el~~~sG~l~~f~eemy~v~~~g~~~~~~~~~~~l~L~ 269 (522)
T 3vbb_A 190 GSRGYFLKGVLVFLEQALIQYALRTLGSRGYIPIYTPFFMRKEVMQEVAQLSQFDEELYKVIGKGSEKSDDNSYDEKYLI 269 (522)
T ss_dssp STTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHSCCC-CCSCCCEEC------------CCEEEC
T ss_pred CcceEEEcCHHHHHHHHHHHHHHHHHHHcCCEEEECCcccchHHHhhcCCcccCcccceEeecCCccccccccCcceeEc
Confidence 468889999999999999999999999999999999999 22 344677889999998763 6789999
Q ss_pred CCCCHHHHHHHHh----CCCCceeEEEecCeEEcCCCC--------CCCCceeEeEEEEeCCCCc-ccH---HHHHHHHH
Q 001059 781 HELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGASA-LTE---AEVLKVTM 844 (1170)
Q Consensus 781 PD~T~~iaR~~~~----~~~~P~r~~Y~g~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~~-~aD---aEvi~la~ 844 (1170)
|.-.+|++.++.. +...|+|+|++|+|||+|.+. -|.++|+|..+.+|..++. .++ .+++.++.
T Consensus 270 PTaE~~l~~l~~~ei~s~~dLPlr~~~~s~cFR~Eags~GrdtrGL~RvhQF~kvE~~~f~~pe~e~s~~e~e~ml~~~e 349 (522)
T 3vbb_A 270 ATSEQPIAALHRDEWLRPEDLPIKYAGLSTCFRQEVGSHGRDTRGIFRVHQFEKIEQFVYSSPHDNKSWEMFEEMITTAE 349 (522)
T ss_dssp SSTHHHHHTTSTTCEECTTTCCEEEEEEEEEECSCCCC----CCCSSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHH
T ss_pred ccCcHHHHHHHhhhecccccCCeeEEEecccccCCCCcCCccCCCcceeeeeEEEEEEEEeCCChHHHHHHHHHHHHHHH
Confidence 9888999877654 345699999999999998753 2445699999999987754 233 58899999
Q ss_pred HHHHHcCCCcceEEE
Q 001059 845 DIVTRFFHAESCDIH 859 (1170)
Q Consensus 845 ~~l~~lgi~~~~~i~ 859 (1170)
++|+.||+. |.+.
T Consensus 350 ~il~~LGLp--yrvv 362 (522)
T 3vbb_A 350 EFYQSLGIP--YHIV 362 (522)
T ss_dssp HHHHHTTCC--EEEE
T ss_pred HHHHHcCCc--eEEE
Confidence 999999996 5543
|
| >3qtc_A Pyrrolysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP B O-methyl tyrosine binding, magnesium binding, aminoacylatio esterification; HET: 0A1 ANP; 1.75A {Methanosarcina mazei} PDB: 2q7e_A* 2q7g_A* 2q7h_A* 2zim_A* 2zin_A* 2e3c_A* 2zcd_A* 2zce_A* 2zio_A* 3vqv_A* 3vqw_A* 3vqx_A* 3vqy_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2.7e-10 Score=127.95 Aligned_cols=122 Identities=11% Similarity=0.133 Sum_probs=98.2
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccC--------CCcccccceEEEeccCCceeeecCCCCHHHHHHHHhC---CCC
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG--------DCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISN---QKS 797 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~--------~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~---~~~ 797 (1170)
+..+.+.+++.|..+||.||.||+|+... ......+++|.| ++..+|||++++++.+.++.+ ...
T Consensus 79 ~~~i~~~ir~~l~~~Gf~EV~Tp~l~~~~~~~~~~~~~~~p~~~~~~~~----~~~~~LR~slsp~L~~~l~~n~~~~~~ 154 (290)
T 3qtc_A 79 LGKLEREITRFFVDRGFLEIKSPILIPLEYIERMGIDNDTELSKQIFRV----DKNFCLRPMLTPNLYNYLRKLDRALPD 154 (290)
T ss_dssp HHHHHHHHHHHHHHTTCEEECCCSEEETHHHHHTTCCTTSSGGGGCCEE----TTTEEECSCSHHHHHHHHHHHTTTSCS
T ss_pred HHHHHHHHHHHHHHCCCEEEECCceeeHHHHHhcCCCcCCchhhhheee----CCCeeEcccChHHHHHHHHHhhccCCC
Confidence 46899999999999999999999992111 122245568877 367999999999999988764 356
Q ss_pred ceeEEEecCeEEcCCCC-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 798 SFKRYEISSVYRRAIGH-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 798 P~r~~Y~g~VfR~e~~~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
|.|+|++|+|||+|..+ .+..||+|++++++|... .++|+..++.++++.+|++ +.+
T Consensus 155 p~rlfeiG~vFR~E~~~~~~~~Ef~ql~~~~~g~~~--~f~elkg~le~ll~~lGl~--~~~ 212 (290)
T 3qtc_A 155 PIKIFEIGPCYRKESDGKEHLEEFTMLVFWQMGSGC--TRENLESIITDFLNHLGID--FKI 212 (290)
T ss_dssp SEEEEEEEEEECCCSCSSSCCSEEEEEEEEEESTTC--CHHHHHHHHHHHHHHHTCC--CEE
T ss_pred CeEEEEEcCEEecCCCCCcCcchheEEEEEEEcCCh--HHHHHHHHHHHHHHHcCCC--cEE
Confidence 99999999999998655 345689999999999763 5789999999999999983 655
|
| >1wle_A Seryl-tRNA synthetase; ligase; HET: SRP; 1.65A {Bos taurus} | Back alignment and structure |
|---|
Probab=99.06 E-value=3e-10 Score=135.18 Aligned_cols=142 Identities=13% Similarity=0.112 Sum_probs=116.1
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCccccc-ceEEEeccCCceeeecCCCCHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKR-NTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~-~my~f~D~~G~~laLRPD~T~~i 787 (1170)
..|+..|.|..+.+.+.|++.+++.+.++||++|.||.| .+. +..+.+.+ +||++.|.+++.++|||.-++++
T Consensus 208 G~g~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~emf~v~~~~~~~l~L~PTaE~~~ 287 (501)
T 1wle_A 208 GHRSYYLRGAGALLQHGLVNFTLNKLIHRGFTPMTVPDLLRGVVFEGCGMTPNAKPSQIYNIDPSRFEDLNLAGTAEVGL 287 (501)
T ss_dssp CTTCCEEETHHHHHHHHHHHHHHHHHHHTTCEEEECCSEECHHHHHHHTCCSSSSSCSSCBBCTTTSSSCEECSSHHHHH
T ss_pred cCceEEEcChHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHHhhcCCCccCccccEEEecCCCCeEEECCcCcHHH
Confidence 467888899999999999999999999999999999999 222 23444555 99999887788999999888899
Q ss_pred HHHHHh----CCCCceeEEEecCeEEcCCC----C---CCCCceeEeEEEEeCCCC-c---ccHHHHHHHHHHHHHHcCC
Q 001059 788 IRWAIS----NQKSSFKRYEISSVYRRAIG----H---SPPNRYLQGDFDIIGGAS-A---LTEAEVLKVTMDIVTRFFH 852 (1170)
Q Consensus 788 aR~~~~----~~~~P~r~~Y~g~VfR~e~~----~---~~~~ef~Q~GvEiiG~~~-~---~aDaEvi~la~~~l~~lgi 852 (1170)
+.++.. +...|+|+|++|++||+|.. . -|.++|.|..+.+|..+. . ..-.+++.++.++|+.||+
T Consensus 288 ~~l~~~~i~s~~~LPlrl~~~s~~FR~Ea~~G~d~~GL~RvhqF~kvE~~~f~~pe~e~s~~~~e~~l~~~~~il~~LgL 367 (501)
T 1wle_A 288 AGYFMDHSVAFRDLPIRMVCSSTCYRAETDTGKEPWGLYRVHHFTKVEMFGVTGPGLEQSSELLEEFLSLQMEILTELGL 367 (501)
T ss_dssp HHHHTTEEEEGGGCSEEEEEEEEEECCCCSCC--CCSSSSCSEEEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHhhccCCcccCCeeEEeccCcccCCCCCCCCCcCceeeeeeeeeeEEEEeCCcHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 888765 34579999999999999864 2 234569999999999874 2 2334889999999999999
Q ss_pred CcceEE
Q 001059 853 AESCDI 858 (1170)
Q Consensus 853 ~~~~~i 858 (1170)
. |.+
T Consensus 368 p--yrv 371 (501)
T 1wle_A 368 H--FRV 371 (501)
T ss_dssp C--EEE
T ss_pred c--EEE
Confidence 6 664
|
| >3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A* | Back alignment and structure |
|---|
Probab=99.02 E-value=7.8e-10 Score=121.72 Aligned_cols=141 Identities=14% Similarity=0.122 Sum_probs=107.4
Q ss_pred cccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccc
Q 001059 352 RYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 352 ~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~ 430 (1170)
..+..|++...++.|+++.||++... |..+++|+.+..... ....+.+|+.+|+.+. |.++.++++++..
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~--~~~~vlK~~~~~~~~--~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~----- 81 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE--NENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFERH----- 81 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS--SCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEEE-----
T ss_pred HHhccceeEeeccCCCCCeEEEEECC--CCcEEEEeCCcccCC--CHHHHHHHHHHHHHHhcCCCCCeEEEEEec-----
Confidence 34678999999999999999998754 789999998642211 1235889999999984 6677788866521
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|+||||++| +|.+.+. +......++.+++.+|+.|
T Consensus 82 -----------------------------------~~~~~lv~e~i~G~~l~~~~~-----~~~~~~~~~~~l~~~l~~L 121 (263)
T 3tm0_A 82 -----------------------------------DGWSNLLMSEADGVLCSEEYE-----DEQSPEKIIELYAECIRLF 121 (263)
T ss_dssp -----------------------------------TTEEEEEEECCSSEEHHHHCC-----TTTCHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecCCeehhhccC-----CcccHHHHHHHHHHHHHHH
Confidence 3457999999987 7766531 1223346788999999999
Q ss_pred Hh-----------------------------------------------------------CCccccCCCCCceeecCCC
Q 001059 510 HG-----------------------------------------------------------QGIIHRDLTPNNIFFDARN 530 (1170)
Q Consensus 510 Hs-----------------------------------------------------------~gIiHrDLKp~NILi~~~~ 530 (1170)
|+ ..++|+|++|.|||++++.
T Consensus 122 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~ 201 (263)
T 3tm0_A 122 HSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGK 201 (263)
T ss_dssp HHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTE
T ss_pred hCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCc
Confidence 98 4589999999999998766
Q ss_pred CEEEeecCcch
Q 001059 531 DIKIGDFGLAK 541 (1170)
Q Consensus 531 ~vKL~DFGlA~ 541 (1170)
.+.|+||+.+.
T Consensus 202 ~~~lIDwe~a~ 212 (263)
T 3tm0_A 202 VSGFIDLGRSG 212 (263)
T ss_dssp EEEECCCTTCE
T ss_pred EEEEEEchhcc
Confidence 67799999875
|
| >3lss_A Seryl-tRNA synthetase; aminoacyl-tRNA synthetase, tRNA ligase, AARS, serrs, translation, ATP-binding, nucleotide-binding, structural genomics; HET: ATP; 1.95A {Trypanosoma brucei} PDB: 3lsq_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=6.4e-10 Score=131.16 Aligned_cols=142 Identities=10% Similarity=0.087 Sum_probs=115.1
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| .-.++.+.+.++||++.+. ++.++|+|.-.+|++
T Consensus 197 Gsgf~~~~p~GarL~~aL~~f~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~~~~f~e~mf~v~~~-~~~~~L~PTaE~~l~ 275 (484)
T 3lss_A 197 GGRSYVLKGGLVQLQVALVSYSLDFLVKRGYTPFYPPFFLNRDVMGEVAQLSQFDEELYQVSGD-GDKKYLIATSEMPIA 275 (484)
T ss_dssp CTTCCEEEHHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHHHTCCEEESS-SSCEEECSSTHHHHH
T ss_pred CceEEEECCHHHHHHHHHHHHHHHHHHHcCCEEEecCccccHHHHHhcCCcccccccceEeecC-CcceEEeccCcHHHH
Confidence 456778889999999999999999999999999999999 2223456678899999875 788999998889988
Q ss_pred HHHHh----CCCCceeEEEecCeEEcCCCC-C-------CCCceeEeEEEEeCCCCc--ccH--HHHHHHHHHHHHHcCC
Q 001059 789 RWAIS----NQKSSFKRYEISSVYRRAIGH-S-------PPNRYLQGDFDIIGGASA--LTE--AEVLKVTMDIVTRFFH 852 (1170)
Q Consensus 789 R~~~~----~~~~P~r~~Y~g~VfR~e~~~-~-------~~~ef~Q~GvEiiG~~~~--~aD--aEvi~la~~~l~~lgi 852 (1170)
-++.. +...|+|+|.++++||+|... + |.++|+|.++.+|+.++. ..+ .+++.++.++|+.||+
T Consensus 276 ~l~~~~i~sy~dLPlr~~~~s~cFR~Eags~Grdt~GL~RvrqF~kvE~~~f~~pe~~~s~~e~e~~~~~~e~il~~LGL 355 (484)
T 3lss_A 276 AYHRGRWFTELKEPLKYAGMSTCFRKEAGAHGRDTLGIFRVHQFDKIEQFVVCSPRQEESWRHLEDMITTSEEFNKSLGL 355 (484)
T ss_dssp HHTTTCEESCCSSCEEEEEEEEEECCCTTCSSSCCSTTSSCSEEEEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHhccccchhhCCeeEEeecCccCCCCCcCCcccCCcceeeeEEEEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 76654 345699999999999998732 2 445699999999998765 222 3788999999999999
Q ss_pred CcceEEE
Q 001059 853 AESCDIH 859 (1170)
Q Consensus 853 ~~~~~i~ 859 (1170)
. |.+.
T Consensus 356 p--yrvv 360 (484)
T 3lss_A 356 P--YRVV 360 (484)
T ss_dssp C--EEEE
T ss_pred c--EEEE
Confidence 6 5553
|
| >1v95_A Nuclear receptor coactivator 5; coactivator independent of AF-2 function (CIA), structural genomics, riken structural genomics/proteomics initiative; NMR {Homo sapiens} SCOP: c.51.1.1 | Back alignment and structure |
|---|
Probab=99.01 E-value=1.2e-09 Score=105.86 Aligned_cols=101 Identities=7% Similarity=0.029 Sum_probs=90.9
Q ss_pred CCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcC
Q 001059 1061 NEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLD 1139 (1170)
Q Consensus 1061 ~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~-~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~ 1139 (1170)
...|.++.|++++ +....+|.+++++|++.|++|+++.. .+.+++++++.|...++||+++||++|.++++|+|+.+.
T Consensus 5 ~~~P~Qv~IlpVs-~~~~~YA~~V~~~L~~~GiRvevD~~r~~e~Lg~kIR~a~~~kvPy~lVVG~kE~e~~sVsVR~r~ 83 (130)
T 1v95_A 5 SSGPVDCSVIVVN-KQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMF 83 (130)
T ss_dssp CCCCCTEEEEESS-SGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEECS
T ss_pred CCCCCeEEEEEeC-cchHHHHHHHHHHHHHCCCEEEEecCCCCCcHHHHHHHHHHcCCCEEEEEechHHhcCeeEEEecC
Confidence 3467899999997 78899999999999999999999874 256899999999999999999999999999999999998
Q ss_pred C--CcccccchHHHHHHHHHHHHhh
Q 001059 1140 V--KKEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1140 ~--~eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
. +++..+++++++..|...+..+
T Consensus 84 ~~~~e~~~m~lde~i~~l~~~~~~~ 108 (130)
T 1v95_A 84 GTPQEHRNMPQADAMVLVARNYERY 108 (130)
T ss_dssp SSCCEEEEEEHHHHHHHHHHHHHHH
T ss_pred CCCCccCccCHHHHHHHHHHHHHHH
Confidence 8 8889999999999997766544
|
| >2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3 | Back alignment and structure |
|---|
Probab=98.94 E-value=8.4e-10 Score=111.86 Aligned_cols=73 Identities=23% Similarity=0.166 Sum_probs=64.5
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHH-hhhhCCCeEEEeeHHHHHHHHhhhCCCCCC
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQAN-SNAREGRVMIFNLVEAAQEFLSEIVPLGQS 82 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~-enl~~gm~miftl~~~~~e~l~~~~~~~~~ 82 (1170)
.+.+.|.|+||++||+++|.+.|.... ++..+...|.+.|.+.++ +|+ ||+|||++|+.+||++.+++....+
T Consensus 72 ~~~l~L~v~lP~~YP~~~P~i~l~~~~-l~~~~~~~L~~~L~~~~~~~~~--G~~mif~lv~~lqe~l~~~~~~~~~ 145 (152)
T 2dax_A 72 MAMFSLACILPFKYPAVLPEITVRSVL-LSRSQQTQLNTDLTAFLQKHCH--GDVCILNATEWVREHASGYVSRDTS 145 (152)
T ss_dssp EEEEEEEEEECSSTTSSCCCCEEECTT-SCHHHHHHHHHHHHHHHHHSSC--SSCCSHHHHHHHHHHHHHHCCCCCC
T ss_pred CceEEEEEECCCCCCCCCCeEEEEccc-CCHHHHHHHHHHHHHHHHHhcC--CcchHHHHHHHHHHHHHHHHhcccc
Confidence 468999999999999999999999865 677778888887887775 699 9999999999999999999877655
|
| >3qne_A Seryl-tRNA synthetase, cytoplasmic; amino acid biosynthesis, CTG-clade, codon ambiguity, pathoge II aminoacyl-tRNA synthetase family; 2.00A {Candida albicans} PDB: 3qo7_A* 3qo8_A* 3qo5_A | Back alignment and structure |
|---|
Probab=98.94 E-value=1.5e-09 Score=127.91 Aligned_cols=142 Identities=11% Similarity=0.097 Sum_probs=114.8
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| .. .++.+.+.++||++.|. ++.++|+|.+.+|++
T Consensus 174 Gsg~~~l~p~GarL~~aL~~~~~d~~~~~Gy~eV~~P~lv~~~l~~~sG~l~~f~eemf~v~~~-~~~~~LipTaE~pl~ 252 (485)
T 3qne_A 174 GHRGYFLRNYGVFLNQALINYGLSFLSSKGYVPLQAPVMMNKEVMAKTAQLSQFDEELYKVIDG-EDEKYLIATSEQPIS 252 (485)
T ss_dssp CTTCCEECTHHHHHHHHHHHHHHHHHHTTTCEEEECCSEEEHHHHHHHSCHHHHTTTCCEEEET-TEEEEECSSTHHHHH
T ss_pred cceeEEEecHHHHHHHHHHHHHHHHHHHcCCEEEeCCccccHHHHhhcCCccccccceEEEeCC-CCeEEEeccccHHHH
Confidence 458888999999999999999999999999999999999 22 23356678899999875 678999999999999
Q ss_pred HHHHhC------CCCceeEEEecCeEEcCCCC--------CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCC
Q 001059 789 RWAISN------QKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFH 852 (1170)
Q Consensus 789 R~~~~~------~~~P~r~~Y~g~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi 852 (1170)
.++... ...|+|+|++++|||+|... -|.++|+|.+..+|..++...+ .+++.++.++++.||+
T Consensus 253 ~l~~~ei~~S~y~dLPlr~~~~s~cfR~Eag~~Grdt~GL~RvhqF~kvE~~~f~~pe~s~~e~e~ml~~~e~il~~LgL 332 (485)
T 3qne_A 253 AYHAGEWFESPAEQLPVRYAGYSSCFRREAGSHGKDAWGIFRVHAFEKIEQFVLTEPEKSWEEFDRMIGCSEEFYQSLGL 332 (485)
T ss_dssp HHTTTCEESSHHHHCCEEEEEEEEEECSCCC-----CCSSSSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhccccccchhcCCeeEEEecccccCCCCCCCccCCCceeeeeeeeeeEEEEeCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 876542 23599999999999998643 2445699999999986643221 4788999999999999
Q ss_pred CcceEEE
Q 001059 853 AESCDIH 859 (1170)
Q Consensus 853 ~~~~~i~ 859 (1170)
. |.+.
T Consensus 333 p--yrvv 337 (485)
T 3qne_A 333 P--YRVV 337 (485)
T ss_dssp C--EEEE
T ss_pred c--EEEE
Confidence 6 5543
|
| >2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.2e-09 Score=110.89 Aligned_cols=73 Identities=16% Similarity=0.063 Sum_probs=67.4
Q ss_pred cEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhh-hhCCCeEEEeeHHHHHHHHhhhCCCCCCC
Q 001059 8 VSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN-AREGRVMIFNLVEAAQEFLSEIVPLGQSN 83 (1170)
Q Consensus 8 ~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~en-l~~gm~miftl~~~~~e~l~~~~~~~~~~ 83 (1170)
..+.|+|+||++||+++|.+.|... +++..+...|.+.|.+.+++| + ||+|||++|+.+||++.+++....+.
T Consensus 75 ~~i~L~v~lP~~YP~~~P~i~l~~~-~l~~~~~~~L~~~L~~~l~~~~l--G~~mif~lve~lqe~~~~~l~~~~~~ 148 (154)
T 2daw_A 75 VKIDLQVTMPHSYPYLALQLFGRSS-ELDRHQQLLLNKGLTSYIGTFDP--GELCVCAAIQWLQDNSASYFLNRKLV 148 (154)
T ss_dssp EEEEEEEEECSSTTSSCCEEEEECS-SSCHHHHHHHHHHHHHHHTTSCT--TSCSHHHHHHHHHHTTHHHHCCCCCC
T ss_pred ceEEEEEEcCCCCCCCCCcEEEEeC-CCCHHHHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHHhCcCCC
Confidence 3789999999999999999999986 899999999999999999887 8 99999999999999999998887765
|
| >3err_A Fusion protein of microtubule binding domain from mouse cytoplasmic dynein and seryl-tRNA...; coiled coil, ligase; HET: AMP; 2.27A {Mus musculus} PDB: 3j1t_A 3j1u_A | Back alignment and structure |
|---|
Probab=98.88 E-value=4.8e-09 Score=126.19 Aligned_cols=140 Identities=9% Similarity=0.097 Sum_probs=113.6
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCCHHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI 788 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia 788 (1170)
..|+..|.|..+.+.+.+++.+++.+.++||++|.||.| .-.+..+.+.++||++.| +.++|+|.-.++++
T Consensus 264 G~g~~~~~p~Ga~l~~aL~~~~~~~~~~~Gy~ev~~P~lv~~~l~~~sG~~~~f~e~mf~~~~---~~~~L~PT~E~~~~ 340 (536)
T 3err_A 264 GSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLN 340 (536)
T ss_dssp CSSCCCEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGCCEETT---TTEEECSSTHHHHH
T ss_pred CCceeEEcCHHHHHHHHHHHHHHHHHHHcCCEEEeccccccHHHHHhcCCcccChhhceEecC---CCEEEccCCcHHHH
Confidence 467889999999999999999999999999999999999 223446677899999976 68999998888887
Q ss_pred HHHHh----CCCCceeEEEecCeEEcCCCC--------CCCCceeEeEEEEeCCCC-cccH---HHHHHHHHHHHHHcCC
Q 001059 789 RWAIS----NQKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGAS-ALTE---AEVLKVTMDIVTRFFH 852 (1170)
Q Consensus 789 R~~~~----~~~~P~r~~Y~g~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~-~~aD---aEvi~la~~~l~~lgi 852 (1170)
-++.. ++..|+|+|.+|++||+|... -|.++|+|.+..+|..++ ..++ .+++.++.++++.||+
T Consensus 341 ~l~~~~i~s~~~LPlr~~~~~~~fR~E~gs~Gr~~~GL~RvrqF~k~e~~~f~~pe~e~s~~~~e~~~~~~~~i~~~LgL 420 (536)
T 3err_A 341 ALHSGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLEL 420 (536)
T ss_dssp HHTTTCEEEGGGCSEEEEEEEEEECCCTTCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHhcccccHhhCCeeEEEecccccCCccccCCCCCCceeeeeeEEEEEEEEECCchHHHHHHHHHHHHHHHHHHHHcCC
Confidence 66544 335699999999999998632 244569999999999887 2223 3778889999999999
Q ss_pred CcceEEE
Q 001059 853 AESCDIH 859 (1170)
Q Consensus 853 ~~~~~i~ 859 (1170)
. |.+.
T Consensus 421 p--yrvv 425 (536)
T 3err_A 421 P--YRLV 425 (536)
T ss_dssp C--EEEE
T ss_pred c--EEEE
Confidence 6 5543
|
| >1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=98.87 E-value=7.4e-09 Score=113.05 Aligned_cols=136 Identities=16% Similarity=0.072 Sum_probs=95.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCc--eeEEEEEeecCccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV--VRYYQAWFETGVAD 430 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnI--V~l~~~~~e~~~~~ 430 (1170)
+..+|.+....+.|..+.||++.. .+|..+++|+.... ....+.+|+.+++.+.+.++ .+++++...
T Consensus 18 ~~~~~~~~~~~~gg~~~~v~~~~~-~~g~~~vlK~~~~~-----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~----- 86 (264)
T 1nd4_A 18 RLFGYDWAQQTIGCSDAAVFRLSA-QGRPVLFVKTDLSG-----ALNELQDEAARLSWLATTGVPCAAVLDVVTE----- 86 (264)
T ss_dssp TTTTCEEEECSCTTSSCEEEEEEC-TTSCCEEEEEECSC-----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEEC-----
T ss_pred hcCCCceEecccCCCCceEEEEec-CCCCeEEEEeCCcc-----cchhhhHHHHHHHHHHhCCCCCCeEEEeccC-----
Confidence 345666655445666799999865 46788999987532 12357789999999965554 457655421
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
....|++|||++| +|. .. ..+ ...++.+++..|..|
T Consensus 87 -----------------------------------~~~~~~v~e~i~G~~l~--~~---~~~---~~~~~~~l~~~l~~l 123 (264)
T 1nd4_A 87 -----------------------------------AGRDWLLLGEVPGQDLL--SS---HLA---PAEKVSIMADAMRRL 123 (264)
T ss_dssp -----------------------------------SSCEEEEEECCSSEETT--TS---CCC---HHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCCCEEEEEecCCcccC--cC---cCC---HhHHHHHHHHHHHHH
Confidence 2346899999987 553 21 122 225667788888888
Q ss_pred HhCC----------------------------------------------------------ccccCCCCCceeecCCCC
Q 001059 510 HGQG----------------------------------------------------------IIHRDLTPNNIFFDARND 531 (1170)
Q Consensus 510 Hs~g----------------------------------------------------------IiHrDLKp~NILi~~~~~ 531 (1170)
|+.. ++|+|++|.|||++.++.
T Consensus 124 h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~ 203 (264)
T 1nd4_A 124 HTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFARLKARMPDGEDLVVTHGDACLPNIMVENGRF 203 (264)
T ss_dssp TTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHHHHHHTCCSSCCEEEECSSCCGGGEEEETTEE
T ss_pred hCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHHHHHHhcCCCCCeEEECCCCCCCcEEEECCcE
Confidence 8643 999999999999987766
Q ss_pred EEEeecCcchh
Q 001059 532 IKIGDFGLAKF 542 (1170)
Q Consensus 532 vKL~DFGlA~~ 542 (1170)
+.|+|||.+..
T Consensus 204 ~~liD~~~a~~ 214 (264)
T 1nd4_A 204 SGFIDCGRLGV 214 (264)
T ss_dssp EEECCCTTCEE
T ss_pred EEEEcchhccc
Confidence 77999999863
|
| >1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A | Back alignment and structure |
|---|
Probab=98.73 E-value=2.4e-08 Score=117.68 Aligned_cols=114 Identities=11% Similarity=0.053 Sum_probs=90.8
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r~ 801 (1170)
.....+..+.+.+++.|..+||.+|+||++.... .+-..++|.+ +..|+.+.|| |+++... ++. .+.|+
T Consensus 133 ~~~~~rs~i~~~ir~~f~~~gF~eVeTP~l~~~~--~e~~~~~f~~-~~~~~~~~Lr~Spel~~~~--~~~----g~~rv 203 (434)
T 1x54_A 133 AIMKVKETLIMAAREWLLKDGWHEVFPPILVTGA--VEGGATLFKL-KYFDKYAYLSQSAQLYLEA--AIF----GLEKV 203 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCC--SSCGGGCCEE-EETTEEEEECSCSHHHHHH--HHH----HHSEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEeCcEEEeec--CCCCceeEEE-eecCCcEEeccChHHHHHH--Hhc----Cccce
Confidence 3467888999999999999999999999985332 2224578876 5678899999 8776543 222 27899
Q ss_pred EEecCeEEcCCCCC-CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
||+|+|||+|.++. +.+ ||+|+++|+.|.+ +.|++.++.++++.+
T Consensus 204 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~----~~dlm~~~e~ll~~l 250 (434)
T 1x54_A 204 WSLTPSFRAEKSRTRRHLTEFWHLELEAAWMD----LWDIMKVEEELVSYM 250 (434)
T ss_dssp EEEEEEECCCCCCCSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEEecceecCCCCCcccccEEEEeeEEEcCCC----HHHHHHHHHHHHHHH
Confidence 99999999998876 444 8999999999974 788999998888774
|
| >3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134} | Back alignment and structure |
|---|
Probab=98.73 E-value=2.4e-08 Score=115.30 Aligned_cols=142 Identities=17% Similarity=0.273 Sum_probs=101.1
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEe--cCCCChhhHHHHHHHHHHHHhcc--CCCceeEEEEEeecCccccCCC
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIR--LKDKSLPVNDRILREVATLSRLQ--HQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~--~~~~~~~~~~~~~~Ev~iL~~l~--HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.++.|+.|.++.||++... +..+++|+.. .... ......+.+|+.+++.+. +..+++++..+.+..
T Consensus 42 ~~~~l~~G~sn~~y~v~~~--~~~~vlr~~~~p~~~~-~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~------- 111 (359)
T 3dxp_A 42 SVEQFKGGQSNPTFKLVTP--GQTYVMRAKPGPKSKL-LPSAHAIEREYRVMDALAGTDVPVAKMYALCEDES------- 111 (359)
T ss_dssp EEEECCC-CCSCEEEEECS--SCEEEEECCCC-----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTT-------
T ss_pred eEEEcCCcccceEEEEEEC--CceEEEEeCCCCCCCC-CCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCC-------
Confidence 3678999999999998764 5688899765 2211 112346888999999997 455777876652210
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh--
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG-- 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs-- 511 (1170)
.....|+||||++| .+.+. ....++......++.+++..|+.||+
T Consensus 112 ------------------------------~~g~~~~vme~v~G~~l~~~--~~~~l~~~~~~~~~~~l~~~La~LH~~~ 159 (359)
T 3dxp_A 112 ------------------------------VIGRAFYIMEFVSGRVLWDQ--SLPGMSPAERTAIYDEMNRVIAAMHTVD 159 (359)
T ss_dssp ------------------------------TTSSCEEEEECCCCBCCCCT--TCTTCCHHHHHHHHHHHHHHHHHHHHSC
T ss_pred ------------------------------ccCCeEEEEEecCCeecCCC--ccccCCHHHHHHHHHHHHHHHHHHhCCC
Confidence 01235899999987 44321 12346788888999999999999997
Q ss_pred --------------------------------------------------------CCccccCCCCCceeecCCCC--EE
Q 001059 512 --------------------------------------------------------QGIIHRDLTPNNIFFDARND--IK 533 (1170)
Q Consensus 512 --------------------------------------------------------~gIiHrDLKp~NILi~~~~~--vK 533 (1170)
..++|+|++|.|||++.++. +.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~ 239 (359)
T 3dxp_A 160 YQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIPAMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLA 239 (359)
T ss_dssp TTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCHHHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEE
T ss_pred chhccccccCCCCCchHHHHHHHHHHHHhcCCcCChHHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEE
Confidence 35899999999999997753 68
Q ss_pred EeecCcchh
Q 001059 534 IGDFGLAKF 542 (1170)
Q Consensus 534 L~DFGlA~~ 542 (1170)
|.||+.+..
T Consensus 240 viDwe~a~~ 248 (359)
T 3dxp_A 240 VLDWELSTL 248 (359)
T ss_dssp ECCCTTCEE
T ss_pred EECcccccc
Confidence 999999874
|
| >1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=98.66 E-value=4.9e-08 Score=114.83 Aligned_cols=114 Identities=8% Similarity=0.051 Sum_probs=89.8
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r~ 801 (1170)
.-.+.+..+.+.+++.|..+||.+|+||++.... .+-..++|.+ +..|+.+.|| |+++ ..| ++. .+.|+
T Consensus 132 ~~~~~rs~i~~~ir~ff~~~gF~eV~TP~l~~~~--~e~~~~~f~~-~~~~~~~~L~~Spql~--~~~-~~~---g~~rv 202 (429)
T 1wyd_A 132 AVIKIQSLALKAFRETLYKEGFIEIFTPKIIASA--TEGGAQLFPV-IYFGKEAFLAQSPQLY--KEL-MAG---VVERV 202 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSC--SSTTCCCCEE-EETTEEEEECSCCHHH--HHH-HHH---HHSEE
T ss_pred HHHHHHHHHHHHHHHHHhhCCCEEEECCEEEeeC--CCCCceeEEE-ecCCceEEecCCcHHH--HHH-HHh---CcCce
Confidence 3467788999999999999999999999985332 2224578877 5668899999 7776 334 333 27799
Q ss_pred EEecCeEEcCCCCC-CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
|++|+|||+|.++. +.+ ||+|+++|+.|.+ ..|++.++.++++.+
T Consensus 203 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~----~~dlm~~~e~ll~~l 249 (429)
T 1wyd_A 203 FEVAPAWRAEESDTPFHLAEFISMDVEMAFAD----YNDVMQLLEKILHNI 249 (429)
T ss_dssp EEEEEEECCCCCCSSSCCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEEcccccccCCccccccceeeEeeeeecCCC----HHHHHHHHHHHHHHH
Confidence 99999999998876 444 8999999999974 688888888888764
|
| >1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A* | Back alignment and structure |
|---|
Probab=98.60 E-value=2.8e-08 Score=116.58 Aligned_cols=115 Identities=12% Similarity=0.109 Sum_probs=64.5
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r~ 801 (1170)
...+.+..+.+.+++.|..+||.+|+||++..... +...++|.+ +..|+.+.|| |+++. +.++ .. .-|+
T Consensus 123 ~~~~~rs~i~~~ir~~f~~~gF~EV~TPil~~~~~--e~~~~~f~~-~~~g~~~~L~~Spel~~---~~l~-~g--~~rv 193 (422)
T 1n9w_A 123 APLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGA--EGGSGLFGV-DYFEKRAYLAQSPQLYK---QIMV-GV--FERV 193 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCC-------------------------------CHHHH---HHHH-HH--HSEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEeCC--CCCceeEEE-eeCCCcEEeeeCHHHHH---HHHh-hC--CCce
Confidence 34678889999999999999999999999853322 223467876 5667889999 88774 3333 22 5699
Q ss_pred EEecCeEEcCCCCC-CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
||+|+|||+|.++. +.+ ||+|+++|+.|.++ ..|++.++.++++.+
T Consensus 194 f~ig~~FR~E~~~~~RH~pEFtqle~e~~~~~d---~~dlm~l~e~ll~~l 241 (422)
T 1n9w_A 194 YEVAPVWRMEEHHTSRHLNEYLSLDVEMGFIAD---EEDLMRLEEALLAEM 241 (422)
T ss_dssp EEEEEC-------------CCEEEEEEEESCSS---HHHHHHHHHHHHHHH
T ss_pred eEEeCceECCCCCCCcccceeEEeeeeeeCCCC---HHHHHHHHHHHHHHH
Confidence 99999999999876 444 89999999999744 678888888888764
|
| >1eov_A ASPRS, aspartyl-tRNA synthetase; aminoacyl tRNA synthetase, tRNA ligase, APO-enzyme, OB-fold,; 2.30A {Saccharomyces cerevisiae} SCOP: b.40.4.1 d.104.1.1 PDB: 1asy_A* 1asz_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=5.6e-07 Score=107.48 Aligned_cols=114 Identities=11% Similarity=0.072 Sum_probs=85.5
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r~ 801 (1170)
.-.+++..|...+++.|..+||.+|+||++.....++ ..++|.+. ..|+.+.|| |++-. -+.++ ..+-|+
T Consensus 176 ~~~~~rs~i~~~ir~~~~~~gF~EV~TPil~~~~~~~--ga~~f~~~-~~~~~~~L~~Spql~~--k~l~~---~g~~rv 247 (487)
T 1eov_A 176 AIFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEG--GSSVFEVT-YFKGKAYLAQSPQFNK--QQLIV---ADFERV 247 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCSSS--SSCCCEEE-ETTEEEEECSCTHHHH--HHHHH---TTCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEeCCEEEEecCCC--Ccccceec-cCCccEEcccChHHHH--HHHHh---cCCCce
Confidence 3467888999999999999999999999985432221 23578764 468899999 87743 23333 235699
Q ss_pred EEecCeEEcCCCCCCC-C-ceeEeEEEE-eCCCCcccHHHHHHHHHHHHHH
Q 001059 802 YEISSVYRRAIGHSPP-N-RYLQGDFDI-IGGASALTEAEVLKVTMDIVTR 849 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~-~-ef~Q~GvEi-iG~~~~~aDaEvi~la~~~l~~ 849 (1170)
||+|+|||+|.++.+| + ||+|+++|+ ||.+. .|++.++-++++.
T Consensus 248 y~ig~~FR~E~~~~~Rh~pEFt~le~e~af~~~~----~dlm~l~E~ll~~ 294 (487)
T 1eov_A 248 YEIGPVFRAENSNTHRHMTEFTGLDMEMAFEEHY----HEVLDTLSELFVF 294 (487)
T ss_dssp EEEEEEECCCCCCCTTCCSEEEEEEEEEECSSCT----HHHHHHHHHHHHH
T ss_pred EEEeccEecCCCCCCccchhhhhhhhhhhhhcCH----HHHHHHHHHHHHH
Confidence 9999999999987544 4 899999998 77533 5677777777765
|
| >3mf2_A BLL0957 protein; aminoacyl-tRNA synthetase, seryl-tRNA synthetase, zinc ION, amino acid:[carrier protein] ligase; HET: AMP; 2.15A {Bradyrhizobium japonicum} PDB: 3mey_A* 3mf1_A* 3pzc_A* | Back alignment and structure |
|---|
Probab=98.42 E-value=4.4e-07 Score=101.76 Aligned_cols=144 Identities=13% Similarity=0.126 Sum_probs=114.3
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ecc--CCCcccccceEEEeccC---------------
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLL--GDCPQFKRNTVKLLTHG--------------- 773 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~--~~~~~~~~~my~f~D~~--------------- 773 (1170)
..|+.-+.+..+.+.+.+++.+++ ...+||++|.||.+ .+. +..+.+.++||....-.
T Consensus 53 ~~g~y~~~g~~a~L~~aLe~~~~~-~~~~Gy~ev~~P~lv~~~~~e~SGhl~~F~e~mf~v~~~~~d~~e~~~ll~~~~~ 131 (346)
T 3mf2_A 53 SDGVYARTALYESIVERLAALITS-HREAGTEALRFPPVMSRAQLEKSGYLKSFPNLLGCVCGLHGTEREINAAVSRFDA 131 (346)
T ss_dssp ETTEEEEEHHHHHHHHHHHHHHHH-TCCTTCEEEECCSEEEHHHHHHTTHHHHCGGGCEEEEEECSCHHHHHHHHHHHHT
T ss_pred CCceEEecchHHHHHHHHHHHHHh-hHhcCCeEEECCCccCHHHHHhcCCcccChhhcceeecccccchhhhhhhhhhcc
Confidence 356777788899999999999999 88999999999999 222 33566788999864322
Q ss_pred ---------CceeeecCCCCHHHHHHHHhC---CCCceeEEEecCeEEcCCCC--CCCCceeEeEEEEeCCCCcccH--H
Q 001059 774 ---------GDLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIGH--SPPNRYLQGDFDIIGGASALTE--A 837 (1170)
Q Consensus 774 ---------G~~laLRPD~T~~iaR~~~~~---~~~P~r~~Y~g~VfR~e~~~--~~~~ef~Q~GvEiiG~~~~~aD--a 837 (1170)
+..++|.|.-.+|+.-++... ...|+|+.-.|+|||+|... .|.++|+|..+-+||.++...+ .
T Consensus 132 ~~~~~~~l~~~d~~LiPtacvpl~~~~~~eg~i~~~plr~~~~g~CFR~EaS~GL~RvhqF~kvE~v~~~tpEqs~~e~e 211 (346)
T 3mf2_A 132 GGDWTTSLSPADLVLSPAACYPVYPIAASRGPLPKGGLRFDVAADCFRREPSKHLDRLQSFRMREYVCIGTPDDVSDFRE 211 (346)
T ss_dssp TSCGGGGEEEEEEEECSSSSTTHHHHHHTTCSCCTTCEEEEEEEEEECCCCCSSTTSCSEEEEEEEEEEESHHHHHHHHH
T ss_pred ccccccccCCCCEEEcccccHHHHHHHccCCcccccCeEEEEECCccCCcCCCCCeeeeeeEEEEEEEEeCHHHHHHHHH
Confidence 347999999999999888742 24599999999999998743 2444699999999997655333 4
Q ss_pred HHHHHHHHHHHHcCCCcceEEEeC
Q 001059 838 EVLKVTMDIVTRFFHAESCDIHLN 861 (1170)
Q Consensus 838 Evi~la~~~l~~lgi~~~~~i~lg 861 (1170)
+++.++.++|+.||+. +.+.+.
T Consensus 212 ~l~~~ae~il~~LgLp--yrv~~~ 233 (346)
T 3mf2_A 212 RWMVRAQAIARDLGLT--FRVDYA 233 (346)
T ss_dssp HHHHHHHHHHHHTTCC--CEEEEC
T ss_pred HHHHHHHHHHHHCCCC--EEEEEc
Confidence 8899999999999995 777664
|
| >3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A | Back alignment and structure |
|---|
Probab=98.33 E-value=5.7e-07 Score=101.26 Aligned_cols=134 Identities=17% Similarity=0.215 Sum_probs=93.3
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCc--eeEEEEEeecCccccCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHV--VRYYQAWFETGVADFDGDSMW 437 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnI--V~l~~~~~e~~~~~~~~~~~~ 437 (1170)
+.++.|.+..||++. ..+++|+... ......+.+|+.+|+.+. +..+ .+++......
T Consensus 26 ~~~~~G~~n~v~~v~-----~~~vlR~~~~----~~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~----------- 85 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN-----RDFIFKFPKH----SRGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPS----------- 85 (304)
T ss_dssp CEEEECSSEEEEEST-----TSEEEEEESS----HHHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCC-----------
T ss_pred EecCCCCcceEEEEC-----CEEEEEecCC----cchHHHHHHHHHHHHHHHhcCCCCCCceEeecCCC-----------
Confidence 468999999999763 4588998542 234567889999999883 3332 3333221000
Q ss_pred CCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-----
Q 001059 438 GSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG----- 511 (1170)
Q Consensus 438 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs----- 511 (1170)
......|+||++++| .+..... ..++.++...++.+++..|+.||+
T Consensus 86 --------------------------~~~~~~~~vm~~i~G~~l~~~~~--~~l~~~~~~~~~~~l~~~la~LH~~~~~~ 137 (304)
T 3sg8_A 86 --------------------------ETYQMSFAGFTKIKGVPLTPLLL--NNLPKQSQNQAAKDLARFLSELHSINISG 137 (304)
T ss_dssp --------------------------SSCSCSCEEEECCCCEECCHHHH--HTSCHHHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred --------------------------CCCCcceEEEcccCCeECCcccc--ccCCHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 001233789999987 5543222 346777778888888888888885
Q ss_pred -----------------------------------------------------CCccccCCCCCceeecC--CCCEEEee
Q 001059 512 -----------------------------------------------------QGIIHRDLTPNNIFFDA--RNDIKIGD 536 (1170)
Q Consensus 512 -----------------------------------------------------~gIiHrDLKp~NILi~~--~~~vKL~D 536 (1170)
..++|+|++|.|||++. ...+.|.|
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD 217 (304)
T 3sg8_A 138 FKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKKVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIID 217 (304)
T ss_dssp SCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECC
T ss_pred CCccchhhHHHHHHHHHHHHHHHhcccCCcccHHHHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEe
Confidence 13799999999999998 45688999
Q ss_pred cCcchh
Q 001059 537 FGLAKF 542 (1170)
Q Consensus 537 FGlA~~ 542 (1170)
|+.+..
T Consensus 218 ~~~~~~ 223 (304)
T 3sg8_A 218 FGDAAI 223 (304)
T ss_dssp CTTCEE
T ss_pred CCCCcc
Confidence 999875
|
| >3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A* | Back alignment and structure |
|---|
Probab=98.18 E-value=7.2e-06 Score=97.91 Aligned_cols=115 Identities=14% Similarity=0.134 Sum_probs=85.2
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEe-ccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
..+++..|...+++.|..+||.+|+||++.....|. ..++|.+. +..|+.+.|| ..+++. |.++ ...-|+
T Consensus 173 ~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~Ga--~a~~F~~~~~~~~~~~yLr--~SpqLylk~l~v---~G~~rV 245 (493)
T 3a74_A 173 TFITRSLIIQSMRRYLDSHGYLEVETPMMHAVAGGA--AARPFITHHNALDMTLYMR--IAIELHLKRLIV---GGLEKV 245 (493)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCCSS--SSCCCEEEETTTTEEEEEC--SCSHHHHHHHHH---TTCCEE
T ss_pred HHHHHHHHHHHHHHHHHhCCeEEEECCeEEecCCCC--cccceEecccCCCceeEEe--cCHHHHHHHHhh---cccCce
Confidence 467788999999999999999999999995332222 34678775 6678999999 333333 3333 235699
Q ss_pred EEecCeEEcCCCCCCCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
|++|++||+|..+.++. ||+|+++|..+.+ ..+++.++-++++.+
T Consensus 246 yeig~~FR~E~~~~rH~pEFT~lE~e~af~d----~~dlm~l~E~ll~~l 291 (493)
T 3a74_A 246 YEIGRVFRNEGISTRHNPEFTMLELYEAYAD----FRDIMKLTENLIAHI 291 (493)
T ss_dssp EEEEEEECCCCCBTTBCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred EEECccccCCCCCcccCCceeEEEEEecCCC----HHHHHHHHHHHHHHH
Confidence 99999999988765444 7999999999864 556777766666554
|
| >3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=9.5e-05 Score=83.30 Aligned_cols=133 Identities=18% Similarity=0.205 Sum_probs=87.1
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCC---CceeEEEEEeecCccccCCCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ---HVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hp---nIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
++.++.|....||+. |..+++|+-. .......+.+|+.+|+.+.+. .+.+++.+...
T Consensus 24 v~~l~~G~~n~v~~v-----g~~~VlR~~~----~~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~----------- 83 (306)
T 3tdw_A 24 VESLGEGFRNYAILV-----NGDWVFRFPK----SQQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKR----------- 83 (306)
T ss_dssp EEEEEECSSEEEEEE-----TTTEEEEEES----SHHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEEC-----------
T ss_pred eeecCCCcceeEEEE-----CCEEEEEecC----CchHHHHHHHHHHHHHHHHhcCCCCCCCeEeeccc-----------
Confidence 456889999999987 5678899742 223456789999999999753 23444433210
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC---
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--- 512 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~--- 512 (1170)
.....|++|+|++| .+....- ..++..+...++.++...|+.||+.
T Consensus 84 ----------------------------~~g~~~~v~e~i~G~~l~~~~~--~~l~~~~~~~~~~~lg~~La~LH~~~~~ 133 (306)
T 3tdw_A 84 ----------------------------SDGNPFVGYRKVQGQILGEDGM--AVLPDDAKDRLALQLAEFMNELSAFPVE 133 (306)
T ss_dssp ----------------------------TTSCEEEEEECCCSEECHHHHH--TTSCHHHHHHHHHHHHHHHHHHHHSCHH
T ss_pred ----------------------------CCCceEEEEeccCCeECchhhh--hhCCHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 12335799999987 5544211 1234444444555555555555432
Q ss_pred ---------------------------------------------------------CccccCCCCCceeecC---CCC-
Q 001059 513 ---------------------------------------------------------GIIHRDLTPNNIFFDA---RND- 531 (1170)
Q Consensus 513 ---------------------------------------------------------gIiHrDLKp~NILi~~---~~~- 531 (1170)
.++|+|++|.|||++. ++.
T Consensus 134 ~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~ 213 (306)
T 3tdw_A 134 TAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDYLTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPL 213 (306)
T ss_dssp HHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCE
T ss_pred cccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCce
Confidence 3599999999999987 455
Q ss_pred EEEeecCcchh
Q 001059 532 IKIGDFGLAKF 542 (1170)
Q Consensus 532 vKL~DFGlA~~ 542 (1170)
+.|.||+.+..
T Consensus 214 ~~~iD~~~a~~ 224 (306)
T 3tdw_A 214 TGIIDFGDAAI 224 (306)
T ss_dssp EEECCCTTCEE
T ss_pred EEEEehhhcCC
Confidence 48999998864
|
| >1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A | Back alignment and structure |
|---|
Probab=97.90 E-value=5.1e-05 Score=90.74 Aligned_cols=115 Identities=9% Similarity=0.053 Sum_probs=82.1
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEe-ccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
-.++|..|...+++.|..+||.+|+||++.....| ...++|.+. +..|..+.||- .+++. |.++. ..-|+
T Consensus 182 ~~r~Rs~i~~~iR~f~~~~gFlEVeTPiL~~~~~G--a~ar~F~t~~~~~~~~~yL~~--SpqLylk~L~v~---G~~rV 254 (504)
T 1e1o_A 182 TFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGG--ASARPFITHHNALDLDMYLRI--APELYLKRLVVG---GFERV 254 (504)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEECCCCSEESSCCS--SCCCCCEEEETTTTEEEEECS--CSHHHHHHHHHH---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCeEEecCCC--CcccceEeccCCCCceEEecc--CHHHHHHHHhhc---CCCcE
Confidence 46778899999999999999999999999532222 233567654 55688999992 33333 33332 24599
Q ss_pred EEecCeEEcCCCCCCCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 802 YEISSVYRRAIGHSPPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
|++|++||+|..+.+.. ||+|+++|..+.+ ..+++.++-++++.+
T Consensus 255 yeIg~~FR~E~~~~rH~pEFt~lE~e~af~d----~~dlm~l~E~li~~~ 300 (504)
T 1e1o_A 255 FEINRNFRNEGISVRHNPEFTMMELYMAYAD----YHDLIELTESLFRTL 300 (504)
T ss_dssp EEEEEEECCCCCCC-CCSEEEEEEEEEESCC----HHHHHHHHHHHHHHH
T ss_pred EEEcccccCCCCCccccCceeeeeeeecCCC----HHHHHHHHHHHHHHH
Confidence 99999999987765444 7999999999864 445666666655543
|
| >1b7y_A Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: d.104.1.1 PDB: 1b70_A* 1eiy_A 1jjc_A* 1pys_A 2iy5_A* 3hfz_A* 3teh_A* 2aly_A* 2akw_A* 2amc_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=9.3e-05 Score=84.42 Aligned_cols=121 Identities=15% Similarity=0.101 Sum_probs=86.0
Q ss_pred hhhHHhHHHHHHHHcCCcccccccee--c---cCC-Ccc-----cccceEEEeccCC-----------ceeeecCCCCHH
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMY--L---LGD-CPQ-----FKRNTVKLLTHGG-----------DLLELSHELRLP 786 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~--~---~~~-~~~-----~~~~my~f~D~~G-----------~~laLRPD~T~~ 786 (1170)
...+.+.++++|...||.++.+|.+. . ... ... .....|.+..+.. +..+||+-+++.
T Consensus 103 ~~~~~~~Ir~~f~~~Gf~Ev~~p~v~~~~~nfd~L~~p~~hpar~~~dt~~l~nP~s~~~~~~~~~~~~~~vLRt~tsp~ 182 (350)
T 1b7y_A 103 ITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPM 182 (350)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTTTTTCCSSSTTTTSSCCCBEECSSCCCBCTTSCBCCSCEEECSSSTHH
T ss_pred HHHHHHHHHHHHHHCCCEEEECcchhcchhHHHhhCCCCCCccccccccEEEcCccccccccccccccccceeeccchHH
Confidence 45788899999999999999999881 1 111 111 0144566765543 778999999999
Q ss_pred HHHHHHhCCCCceeEEEecCeEEcCC-CCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc-CC
Q 001059 787 FIRWAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF-FH 852 (1170)
Q Consensus 787 iaR~~~~~~~~P~r~~Y~g~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l-gi 852 (1170)
.+|.++. +..|+|+|.+|+|||.+. ......||+|+..=++|..-.. .++..++..+++.+ |.
T Consensus 183 llr~l~~-~~~piriFEiGrVFR~d~~d~tH~pEF~qlegl~~g~~v~f--~dLKg~le~ll~~lfG~ 247 (350)
T 1b7y_A 183 QVRYMVA-HTPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAM--AHLKGAIYELAQALFGP 247 (350)
T ss_dssp HHHHHHH-CCSSEEEEEEEEEECCCCCCSSCCSEEEEEEEEEEETTCCH--HHHHHHHHHHHHHHSCS
T ss_pred HHHHHHh-cCCCeeEEEeeeEEECCCCCCCCCChhHEEEEEEECCCCCH--HHHHHHHHHHHHhhcCC
Confidence 9999876 356999999999999754 3344568999999999863222 34455556666665 64
|
| >3l4g_A Phenylalanyl-tRNA synthetase alpha chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.88 E-value=5.7e-05 Score=89.52 Aligned_cols=129 Identities=12% Similarity=0.015 Sum_probs=90.8
Q ss_pred hhhhHHhHHHHHHHHcCCccccc-cce-----eccC--C-Ccccc---cceEEEeccC----------------------
Q 001059 728 LRDYVVQVTKEMFRQHCAKHLEI-EPM-----YLLG--D-CPQFK---RNTVKLLTHG---------------------- 773 (1170)
Q Consensus 728 ~~~~I~~~i~~~f~~~Gy~~I~t-P~~-----~~~~--~-~~~~~---~~my~f~D~~---------------------- 773 (1170)
-...+.+.++++|...||.++.| |.+ .|.. . .+... ...|.+.++.
T Consensus 226 Pl~~v~~~Ir~if~~mGF~Ev~t~~~ves~~~NFDaLn~P~dHPaR~~~Dtfyi~~P~~~~~~~e~~~~~v~~~He~g~~ 305 (508)
T 3l4g_A 226 PLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGY 305 (508)
T ss_dssp HHHHHHHHHHHHHHHTTCEECCCCCSEEEHHHHTGGGTCCSSSTTSSTTTSCBBSTTCBCSCCCHHHHHHHHHHHHTCBT
T ss_pred HHHHHHHHHHHHHHHCcCeEeccCCccccHHHHHHhcCCCCCCcccccCceEEEcCccccccccHHHHHhhhhhhhcccc
Confidence 35678899999999999999876 555 1111 1 11111 2235555431
Q ss_pred -------------CceeeecCCCCHHHHHHHHhC----CCCceeEEEecCeEEcCCC-CCCCCceeEeEEEEeCCCCccc
Q 001059 774 -------------GDLLELSHELRLPFIRWAISN----QKSSFKRYEISSVYRRAIG-HSPPNRYLQGDFDIIGGASALT 835 (1170)
Q Consensus 774 -------------G~~laLRPD~T~~iaR~~~~~----~~~P~r~~Y~g~VfR~e~~-~~~~~ef~Q~GvEiiG~~~~~a 835 (1170)
++..+||+.+|+..+|++..| ...|+|+|++|+|||++.. ..+..+|+|++.-++|. ...
T Consensus 306 ~s~g~~~~~~~~~~~~~vLRThtsp~~lr~l~~N~~~~~~~PiriFeiGrVFR~d~~DatHlpeFhQlegl~~~~--~v~ 383 (508)
T 3l4g_A 306 GSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADH--GLT 383 (508)
T ss_dssp TBCCCCSCCCHHHHTBEEECCCTHHHHHHHHHHHHTSSSCCCEEEEEEEEEECCSCCCSSSCSEEEEEEEEEEEE--SCC
T ss_pred CCccccccccccccccccccCCChHHHHHHHHHhhhhcCCCCceEEEEccEEecCCCCCCcCCeEEEEEEEEECC--CCC
Confidence 157899999999999999863 3469999999999999764 34556799999988763 244
Q ss_pred HHHHHHHHHHHHHHcCCCcceEEE
Q 001059 836 EAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 836 DaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
-+++..++..+++++|+.+ +.++
T Consensus 384 f~dLKg~Le~~l~~lG~~~-~rfr 406 (508)
T 3l4g_A 384 LGHLMGVLREFFTKLGITQ-LRFK 406 (508)
T ss_dssp HHHHHHHHHHHHHTTTCCC-CEEE
T ss_pred HHHHHHHHHHHHHHcCCcc-eEee
Confidence 4677888888888888753 4443
|
| >4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.00013 Score=79.93 Aligned_cols=133 Identities=18% Similarity=0.177 Sum_probs=88.6
Q ss_pred eeeccCCcE-EEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFG-HVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG-~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
+.+..|..| .||+......+..+++|+-+. .....+.+|...|+.+. +--+.++++++..
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~-----~~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~------------- 91 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKG-----SVANDVTDEMVRLNWLTAFMPLPTIKHFIRT------------- 91 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEET-----HHHHHHHHHHHHHHHHTTTSCCCCEEEEEEE-------------
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCC-----CCHhHHHHHHHHHHHhccCCCcCeEEEEEEE-------------
Confidence 345556665 699888877788899998652 23456889999999884 2224556655421
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC-----
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ----- 512 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~----- 512 (1170)
....|+|||+++| ++.+..... ......+..++...|+-||+.
T Consensus 92 ---------------------------~~~~~lvme~l~G~~~~~~~~~~----~~~~~~~~~~l~~~L~~Lh~~~~~~~ 140 (272)
T 4gkh_A 92 ---------------------------PDDAWLLTTAIPGKTAFQVLEEY----PDSGENIVDALAVFLRRLHSIPVCNC 140 (272)
T ss_dssp ---------------------------TTEEEEEEECCCSEEHHHHHHHC----GGGHHHHHHHHHHHHHHHHTSCGGGC
T ss_pred ---------------------------CCeEEEEEEeeCCccccccccCC----HHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 2456899999987 555543321 112223444555555555531
Q ss_pred -----------------------------------------------------CccccCCCCCceeecCCCCEEEeecCc
Q 001059 513 -----------------------------------------------------GIIHRDLTPNNIFFDARNDIKIGDFGL 539 (1170)
Q Consensus 513 -----------------------------------------------------gIiHrDLKp~NILi~~~~~vKL~DFGl 539 (1170)
.++|+|+.|.|||++.++.+-|.||+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~ 220 (272)
T 4gkh_A 141 PFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGR 220 (272)
T ss_dssp CBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTT
T ss_pred CcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcc
Confidence 268999999999999877777999998
Q ss_pred chh
Q 001059 540 AKF 542 (1170)
Q Consensus 540 A~~ 542 (1170)
+..
T Consensus 221 a~~ 223 (272)
T 4gkh_A 221 VGI 223 (272)
T ss_dssp CEE
T ss_pred ccc
Confidence 863
|
| >2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=6.6e-05 Score=87.62 Aligned_cols=61 Identities=25% Similarity=0.255 Sum_probs=38.5
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC----C-hhhHHHHHHHHHHHHhccC--CCc-eeEE
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK----S-LPVNDRILREVATLSRLQH--QHV-VRYY 420 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~----~-~~~~~~~~~Ev~iL~~l~H--pnI-V~l~ 420 (1170)
.+.||.|.++.||++....+++.|+||....... . .....++.+|..+|+.+.+ |.. .+++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~ 103 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVF 103 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEE
Confidence 5689999999999997765678999998653211 0 0123456789999988843 433 3455
|
| >3a5y_A GENX, putative lysyl-tRNA synthetase; aminoacyl-tRNA synthetase paralog, translation, lysyl- synthetase, lysyladenylate analog; HET: KAA; 1.90A {Escherichia coli} PDB: 3a5z_A* 3g1z_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00027 Score=80.63 Aligned_cols=119 Identities=8% Similarity=0.008 Sum_probs=78.5
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEe--c---cCCceeeecCCCCHHHHHHHHhCCCCc
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL--T---HGGDLLELSHELRLPFIRWAISNQKSS 798 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~--D---~~G~~laLRPD~T~~iaR~~~~~~~~P 798 (1170)
...++|..|...+++.|...||-+|+||++.-.. +++...+.|++. + ..+..+-||---=.-.-|.++...
T Consensus 34 ~~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~-~~~a~~~~F~~~~~~~~~~~~~~~yL~~Spql~~k~l~~~g~--- 109 (345)
T 3a5y_A 34 PNLLKRAAIMAEIRRFFADRGVLEVETPCMSQAT-VTDIHLVPFETRFVGPGHSQGMNLWLMTSPEYHMKRLLVAGC--- 109 (345)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESSC-CCCTTCCCCEEEECCSTTSCCEEEEECSCSHHHHHHHHHTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCEEEecC-CCCCccceEEEEecCcccccCCCEeecCCHHHHHHHHHHcCC---
Confidence 4577889999999999999999999999985322 222233455432 1 112445566321122334454322
Q ss_pred eeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 799 FKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 799 ~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
-|+|++|+|||+|....+. .||+|+++|..+.+ -.+++.++-++++.+
T Consensus 110 ~rvyqIg~~FR~E~~~~rH~pEFt~lE~e~af~d----~~d~m~~~E~li~~v 158 (345)
T 3a5y_A 110 GPVFQLCRSFRNEEMGRYHNPEFTMLEWYRPHYD----MYRLMNEVDDLLQQV 158 (345)
T ss_dssp CSEEEEEEEECCCCCBTTBCSEEEEEEEEEETCC----HHHHHHHHHHHHHHH
T ss_pred CcEEEEEcceeCCCCcccccchhheeeeeeeCCC----HHHHHHHHHHHHHHH
Confidence 3999999999998774333 37999999999863 345677766666654
|
| >2du3_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase/RNA complex; HET: SEP; 2.60A {Archaeoglobus fulgidus} PDB: 2du4_A 2du5_A* 2du6_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=7.4e-05 Score=88.97 Aligned_cols=76 Identities=13% Similarity=0.187 Sum_probs=59.3
Q ss_pred eeeecCCCCHHHHHHHHhC---CCCceeEEEecCeEEcCCC-C-CCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAIG-H-SPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~~---~~~P~r~~Y~g~VfR~e~~-~-~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+..| +..|+|+|++|+|||++.+ + .+..+|+|+++.+.|..... .++..++..+++.|
T Consensus 180 ~svLRTsLlPgLL~~lr~N~~r~~~pvrLFEIG~VFr~d~~~d~th~~Ef~qLagli~G~~vdf--~dLKgilE~LL~~L 257 (534)
T 2du3_A 180 TLTLRSHMTTGWFITLSHIADKLPLPIKLFSIDRCFRREQGEDATRLYTYFSASCVLVDEELSV--DDGKAVAEALLRQF 257 (534)
T ss_dssp EEEECSSHHHHHHHHHHTTTTTSCSSEEEEEEEEEECCCTTCSSSCCSEEEEEEEEEECSSCCH--HHHHHHHHHHHGGG
T ss_pred ccccCccchhhHHHHHHHHHhCCCCCeeEEEEeeEEecCccccccccceeeEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 4799999999666655543 3569999999999998654 4 34578999999999974332 56888888889888
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 258 Gi~ 260 (534)
T 2du3_A 258 GFE 260 (534)
T ss_dssp TCC
T ss_pred CCC
Confidence 875
|
| >2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A* | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00049 Score=81.12 Aligned_cols=112 Identities=13% Similarity=0.041 Sum_probs=79.5
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCC-CcccccceEEEeccCCceeeec--CCCCHHHHHHHHhCCCCcee
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELS--HELRLPFIRWAISNQKSSFK 800 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLR--PD~T~~iaR~~~~~~~~P~r 800 (1170)
...+++..|...+++.|..+||-+|+||+++-... |. .++|.+ +--|+.+.|| |++-.. +.++. --|
T Consensus 130 ~~~r~Rs~i~~~iR~ff~~~gFlEVeTPiL~~s~~eG~---~~~F~~-~~~g~~~~L~~SpqLylq--~l~~g----~~r 199 (435)
T 2xgt_A 130 ALLRLRAAATRAMREHFYNAGYVEVAPPTLVQTQVEGG---STLFNL-DYFGEQSFLTQSSQLYLE--TCIPT----LGD 199 (435)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCSSCT---TSCCEE-EETTEEEEECSCSHHHHH--HHHHH----HCS
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCeEeeccCCCc---hhceee-ccCCcccccCCChHHHHH--Hhhhc----cCc
Confidence 34678889999999999999999999999843322 21 234544 3457888888 544333 22321 349
Q ss_pred EEEecCeEEcCCCCC-CCC-ceeEeEEEEeCCCCcccHHHHHHHHHHHHHH
Q 001059 801 RYEISSVYRRAIGHS-PPN-RYLQGDFDIIGGASALTEAEVLKVTMDIVTR 849 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~-~~~-ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~ 849 (1170)
+|++|++||+|.... +.. ||+|+++|..+.+ -.+++.++-+++..
T Consensus 200 vfeIg~~FR~E~~~t~RH~~EFT~lE~e~af~d----~~d~m~~~E~li~~ 246 (435)
T 2xgt_A 200 VFCIAQSYRAEKSRTRRHLAEYAHVEAECPFIT----LDDLMEKIEELVCD 246 (435)
T ss_dssp EEEEEEEECCCSSCCTTCCSEEEEEEEEEESCC----HHHHHHHHHHHHHH
T ss_pred eEEEecceecCCCCccccccceeEEEEEEecCC----HHHHHHHHHHHHHH
Confidence 999999999998664 444 8999999999864 34566666666554
|
| >3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A* | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00051 Score=80.80 Aligned_cols=115 Identities=13% Similarity=0.073 Sum_probs=77.8
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEEe
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 804 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y~ 804 (1170)
-.+++..+...+++.|...||.+|+||++.-... +-..++|.+.. .|+.+.||.---.-.-|.++. .--|+|++
T Consensus 136 ~~~~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~~~--eg~~~~f~~~~-~~~~~yL~~Spql~~q~l~~~---g~~rvf~i 209 (438)
T 3nem_A 136 IFKIRSSVFKAVRDFFHENGFIEIHTPKIIATAT--EGGTELFPMKY-FEEDAFLAQSPQLYKQIMMAS---GLDRVYEI 209 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCS--SCSSSCCEEEE-TTEEEEECSCSHHHHHHGGGT---TCCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCcEEEeCCEEecCCC--CCCccceeEee-CCccEEEecChHHHHHHHHhc---CCCceEEE
Confidence 4667889999999999999999999999843322 11233565533 467888984332222233322 24599999
Q ss_pred cCeEEcCCCCCC-C-CceeEeEEEEeCCCCcccHHHHHHHHHHHHH
Q 001059 805 SSVYRRAIGHSP-P-NRYLQGDFDIIGGASALTEAEVLKVTMDIVT 848 (1170)
Q Consensus 805 g~VfR~e~~~~~-~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~ 848 (1170)
|++||+|....+ . .||+|+++|..+.++.. +++.++-++++
T Consensus 210 ~~~FR~E~~~t~RH~pEFt~le~e~a~~~~~~---d~m~~~E~li~ 252 (438)
T 3nem_A 210 APIFRAEEHNTTRHLNEAWSIDSEMAFIEDEE---EVMSFLERLVA 252 (438)
T ss_dssp EEEECCCSSCCTTCCSEEEEEEEEEESCSSHH---HHHHHHHHHHH
T ss_pred cceEECCCCCCcccccceeeeeeeeccCccHH---HHHHHHHHHHH
Confidence 999999887653 3 38999999999876432 34444444443
|
| >2du7_A O-phosphoseryl-tRNA synthetase; alpha4 tetramer, ligase, structural genomics, NPPSFA; 3.60A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00038 Score=82.80 Aligned_cols=76 Identities=17% Similarity=0.212 Sum_probs=57.8
Q ss_pred ceeeecCCCCHHHHHHHHhC---CCCceeEEEecCeEEcCC--CCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHH
Q 001059 775 DLLELSHELRLPFIRWAISN---QKSSFKRYEISSVYRRAI--GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTR 849 (1170)
Q Consensus 775 ~~laLRPD~T~~iaR~~~~~---~~~P~r~~Y~g~VfR~e~--~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~ 849 (1170)
+..+||+.+++.+...+..| +..|+|+|.+|+|||.+. ...+..+|+|++.-+.|.. ..-.++..++..+++.
T Consensus 191 e~svLRTsLlPGLL~~vr~N~~r~~~pvrlFEiGrVFr~D~~~d~th~~ef~qLaglv~G~~--vdF~DLKG~Le~ll~~ 268 (549)
T 2du7_A 191 TTLTLRSHMTSGWFITLSSLIKKRKLPLKLFSIDRCFRREQREDRSHLMSYHSASCVVVGED--VSVDDGKVVAEGLLAQ 268 (549)
T ss_dssp EEEECCSTTHHHHHHHHHTTTTTSCSSEEEEEEEEECCCCSSCSSSCCSCEEEEEEEEECTT--CCHHHHHHHHHHHHGG
T ss_pred cccccccccchhHHHHHHHHHhcCCCCeEEEEEeeEEecCCcccCcCCCcceEEEEEEECCC--CCHHHHHHHHHHHHHH
Confidence 35789999999666555543 456999999999999754 2345578999999999963 3345677788888888
Q ss_pred cCC
Q 001059 850 FFH 852 (1170)
Q Consensus 850 lgi 852 (1170)
||+
T Consensus 269 LGi 271 (549)
T 2du7_A 269 FGF 271 (549)
T ss_dssp GTC
T ss_pred cCC
Confidence 876
|
| >2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.0016 Score=73.58 Aligned_cols=30 Identities=17% Similarity=0.309 Sum_probs=27.6
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAK 541 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~ 541 (1170)
..++|+|+++.|||++.++.+.|+||+.+.
T Consensus 222 ~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~ 251 (346)
T 2q83_A 222 PNLCHQDYGTGNTLLGENEQIWVIDLDTVS 251 (346)
T ss_dssp CCEECSSCSTTSEEECGGGCEEECCCTTCE
T ss_pred CceecCCCCcccEEEeCCCcEEEEehhhcc
Confidence 579999999999999888899999999875
|
| >3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A* | Back alignment and structure |
|---|
Probab=97.24 E-value=0.00056 Score=78.31 Aligned_cols=66 Identities=6% Similarity=-0.033 Sum_probs=41.3
Q ss_pred eEEeee-ccCCcEEEEEEEEc--c----CCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhcc-C--CCceeEEEEE
Q 001059 358 EELQPL-GHGGFGHVVLCKNK--L----DGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQ-H--QHVVRYYQAW 423 (1170)
Q Consensus 358 ~~~~~L-G~G~fG~Vyka~~~--~----tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~-H--pnIV~l~~~~ 423 (1170)
...+.| +.|....+|++... . +|..+++|+...... .......+.+|+.+|+.+. + -.+.+++.++
T Consensus 23 ~~~~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~ 99 (357)
T 3ats_A 23 TVESGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIE 99 (357)
T ss_dssp EEEEEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEE
T ss_pred EEEEECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEc
Confidence 345678 88999999988753 1 166899997643210 0000135778999998884 3 3466677554
|
| >1c0a_A Aspartyl tRNA synthetase; protein-RNA complex, ligase/RNA complex; HET: 4SU H2U QUO G7M 5MU PSU AMP AMO; 2.40A {Escherichia coli} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1il2_A* 1eqr_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.0014 Score=79.96 Aligned_cols=99 Identities=13% Similarity=0.139 Sum_probs=68.9
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEec--cCCceeeecCCCCHHHHH--HHHhCCCCcee
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLT--HGGDLLELSHELRLPFIR--WAISNQKSSFK 800 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D--~~G~~laLRPD~T~~iaR--~~~~~~~~P~r 800 (1170)
..++|..|...+++.|...||-+|+||++.-...+. .+. |.+.. ..|..++|| ..+++.. .++. . =-|
T Consensus 137 ~l~~Rs~i~~~iR~fl~~~gFlEVeTPiL~~s~~eG--Ar~-F~v~~~~~~~~~y~L~--qSPQl~kq~Lmv~-G--~~r 208 (585)
T 1c0a_A 137 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATPEG--ARD-YLVPSRVHKGKFYALP--QSPQLFKQLLMMS-G--FDR 208 (585)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--SCC-CEEECSSSTTCEEECC--SCSHHHHHHHHHT-T--CCE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--Ccc-ceecccccCCceEeCc--cCHHHHHHHHHhc-C--CCc
Confidence 467788999999999999999999999985332211 123 43322 346667787 3455543 2332 1 249
Q ss_pred EEEecCeEEcCCCCCCCC-ceeEeEEEEeCCC
Q 001059 801 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 831 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 831 (1170)
+|++|++||.|.....+. ||+|+++|.-+.+
T Consensus 209 vfqI~~~FR~E~~~t~r~pEFT~lE~e~af~d 240 (585)
T 1c0a_A 209 YYQIVKCFRDEDLRADRQPEFTQIDVETSFMT 240 (585)
T ss_dssp EEEEEEEECCCCCBTTBCSEEEEEEEEEESCC
T ss_pred eEEEeceeecCCCCCCcCcccceeeeeecCCC
Confidence 999999999986554333 8999999998864
|
| >1l0w_A Aspartyl-tRNA synthetase; space-grown crystal, dimeric enzyme, flexible domains, ligase; 2.01A {Thermus thermophilus} SCOP: b.40.4.1 d.74.4.1 d.104.1.1 PDB: 1efw_A* 1g51_A | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0016 Score=79.27 Aligned_cols=99 Identities=11% Similarity=0.116 Sum_probs=69.0
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEec--cCCceeeecCCCCHHHHH--HHHhCCCCcee
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLT--HGGDLLELSHELRLPFIR--WAISNQKSSFK 800 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D--~~G~~laLRPD~T~~iaR--~~~~~~~~P~r 800 (1170)
..++|..+...+++.|...||-+|+||++.-...+. .+. |.... ..|..++||- .+++.. .++. . =-|
T Consensus 143 ~l~~Rs~i~~~iR~fl~~~gF~EVeTPiL~~s~~eG--Ar~-F~v~~~~~~~~~y~L~q--SPQl~kq~Lmv~-G--~~r 214 (580)
T 1l0w_A 143 NLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTPEG--ARD-FLVPYRHEPGLFYALPQ--SPQLFKQMLMVA-G--LDR 214 (580)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCSSS--SCC-CEEECTTSTTEEEECCS--CSHHHHHHHHHT-T--CSE
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEeCCEEecCCCCC--CCC-ccccccccCCceeECcc--CHHHHHHHHHHh-c--cCC
Confidence 467788999999999999999999999985332211 122 43322 2466677873 455543 2332 1 239
Q ss_pred EEEecCeEEcCCCCCCCC-ceeEeEEEEeCCC
Q 001059 801 RYEISSVYRRAIGHSPPN-RYLQGDFDIIGGA 831 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~~-ef~Q~GvEiiG~~ 831 (1170)
+|++|+|||.|.....+. ||+|+++|.-+.+
T Consensus 215 vfqI~~~FR~E~~~~~r~pEFT~lE~e~af~d 246 (580)
T 1l0w_A 215 YFQIARCFRDEDLRADRQPDFTQLDLEMSFVE 246 (580)
T ss_dssp EEEEEEEECCCCCCSSCCSEEEEEEEEEESCC
T ss_pred eEEEeceeeCCCCCCCcCCCccceeeeecCCC
Confidence 999999999987654433 8999999998864
|
| >2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.004 Score=65.78 Aligned_cols=134 Identities=16% Similarity=0.184 Sum_probs=89.7
Q ss_pred cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHH-HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCC
Q 001059 479 TLRQVFESY-DHFDKELAWHLFRQIVEGLAHI-HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPT 556 (1170)
Q Consensus 479 sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yL-Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~ 556 (1170)
+|.++|... .+++++++|.++.|.+.+|.-+ +...-..+=+-|..|++..+|+|...+ +.+.
T Consensus 34 SL~eIL~~~~~PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~--------------- 97 (229)
T 2yle_A 34 SLEEILRLYNQPINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADD--------------- 97 (229)
T ss_dssp EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C------------------
T ss_pred cHHHHHHHcCCCcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-cccc---------------
Confidence 799999865 5799999999999999998876 211212333456899999999987663 1110
Q ss_pred CCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhcCCCchhHHHHHHHHhhhcCCCCCccccCCHHH
Q 001059 557 DTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ 636 (1170)
Q Consensus 557 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELltPf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~ 636 (1170)
.....+.|||.... ..+.+.=|||||+++|..+- -+..+......++++
T Consensus 98 ------------~~~~~~~~pe~~~~--~~te~~~IysLG~tLY~ALD-----------------ygL~e~eE~eLS~~L 146 (229)
T 2yle_A 98 ------------AGEPPPVAGKLGYS--QCMETEVIESLGIIIYKALD-----------------YGLKENEERELSPPL 146 (229)
T ss_dssp ---------------------CCSSS--SSCHHHHHHHHHHHHHHHHT-----------------TTCCTTEEECCCHHH
T ss_pred ------------ccccCCCChhhccc--cchHHHHHHHHHHHHHHHhh-----------------cCCCcccchhhCHHH
Confidence 11234668887642 35788999999999999872 111223445677899
Q ss_pred HHHHHHccCC-------------------------CCCCCCCHHHHHh
Q 001059 637 ESLLRRLMSP-------------------------SPSDRPSATELLQ 659 (1170)
Q Consensus 637 ~~LI~~~L~~-------------------------dP~~RPta~eiL~ 659 (1170)
.+||..|... .+..|++..+|++
T Consensus 147 E~LL~~Mt~~~~d~~~~DeG~~~~~eg~~d~~~~~~~~~~~sl~~Vi~ 194 (229)
T 2yle_A 147 EQLIDHMANTVEADGSNDEGYEAAEEGLGDEDEKRKISAIRSYRDVMK 194 (229)
T ss_dssp HHHHHHHTTCCC--------------------CCSCCCCCCSHHHHHH
T ss_pred HHHHHHHHhcccccccccccccccccccccccccccccCcCCHHHHHH
Confidence 9999999866 2457888888875
|
| >2rhq_A Phenylalanyl-tRNA synthetase alpha chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0031 Score=70.51 Aligned_cols=118 Identities=9% Similarity=0.052 Sum_probs=79.5
Q ss_pred hhhHHhHHHHHHHHcCCccccccce-e----ccCC-Ccc-c-c---cceEEEeccCCceeeecCCCCHHHHHHHHhCC-C
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPM-Y----LLGD-CPQ-F-K---RNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-K 796 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~-~----~~~~-~~~-~-~---~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~-~ 796 (1170)
...+.+.++++|...||.||.+|.+ . +... ... . . ...|.+. +..+||+-+++.+.|.++.|. .
T Consensus 55 ~~~~~~~iR~~l~~~Gf~Ev~~s~l~~~~~nf~~l~~~~~~par~~~d~~~l~----e~~vLRtsl~p~ll~~l~~N~~~ 130 (294)
T 2rhq_A 55 LTRTVEEIEDLFLGLGYEIVDGYEVEQDYYNFEALNLPKSHPARDMQDSFYIT----DEILMRTHTSPVQARTMEKRNGQ 130 (294)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTGGGTCCTTCGGGCTTTSCBSS----SSEEECSSSHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHHHCCCEEEcCcceeeehhhHHhhCCCCCccccccCCcEEEc----CcceeeccCHHHHHHHHHhcCCC
Confidence 4568889999999999999988877 1 1111 111 0 0 1134442 567999999999999998874 4
Q ss_pred CceeEEEecCeEEcCC-CCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc-CC
Q 001059 797 SSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF-FH 852 (1170)
Q Consensus 797 ~P~r~~Y~g~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l-gi 852 (1170)
.|+|+|.+|+|||.+. ......||+|+.+=+.|..-.. .++..++..+++.+ |+
T Consensus 131 ~~~riFEiG~Vfr~d~~d~~h~~Ef~~Le~~~~g~~~df--~dlKg~le~ll~~l~g~ 186 (294)
T 2rhq_A 131 GPVKIICPGKVYRRDSDDATHSHQFTQIEGLVVDKNIKM--SDLKGTLELVAKKLFGA 186 (294)
T ss_dssp SCEEEEEEEEEECCCCCBTTBCSEEEEEEEEEEESSCCH--HHHHHHHHHHHHHHHCT
T ss_pred CCccEEEEcCEEecCCCCCCCCChhhEEEEEEECCCCCH--HHHHHHHHHHHHHHhCC
Confidence 6999999999999743 2223358999998888853111 23444555555555 65
|
| >3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.002 Score=76.09 Aligned_cols=113 Identities=14% Similarity=0.069 Sum_probs=75.6
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCC-CcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE 803 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y 803 (1170)
-.+++..|...+++.|...||-+|+||++.-... |. .++|.+ +--|+.+.||----.-.-+.++. --|+|+
T Consensus 155 ~lr~Rs~i~~~iR~ff~~~gF~EVeTPiL~~s~~eGg---~~~f~~-~~~~~~~~L~~SpqL~lq~l~~g----~~rVye 226 (456)
T 3m4p_A 155 VLQLRSEIQWYFRKYYHDNHFTEIQPPTIVKTQCEGG---STLFKL-QYFNEPAYLTQSSQLYLESVIAS----LGKSFC 226 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEEC---------CCCCEE-EETTEEEEECSCCHHHHHTTHHH----HSSEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCEEEeCCeeecCCCCCc---cccccc-cccCCCcccccCHHHHHHHHHhc----cCcEEE
Confidence 4677889999999999999999999999843221 21 224443 34467778876433333333331 248999
Q ss_pred ecCeEEcCCCCCCC--CceeEeEEEEeCCCCcccHHHHHHHHHHHHHH
Q 001059 804 ISSVYRRAIGHSPP--NRYLQGDFDIIGGASALTEAEVLKVTMDIVTR 849 (1170)
Q Consensus 804 ~g~VfR~e~~~~~~--~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~ 849 (1170)
+|++||+|....++ -||+|+++|.-+.+ --+++.++-++++.
T Consensus 227 ig~~FR~E~~~t~rH~pEFtmlE~e~af~d----~~d~m~~~E~li~~ 270 (456)
T 3m4p_A 227 MLSSYRAEQSRTVRHLAEYLHLEAELPFIS----FEDLLNHLEDLVCT 270 (456)
T ss_dssp EEEEECCCSCCCSSCCSEEEEEEEEEESCC----HHHHHHHHHHHHHH
T ss_pred EEhheecCCCCCCcchHHHHHhHHHHhcCC----HHHHHHHHHHHHHH
Confidence 99999998765433 38999999998864 23455555555543
|
| >2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0044 Score=72.77 Aligned_cols=32 Identities=19% Similarity=0.372 Sum_probs=28.3
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
+...++|+|++|.|||++.++ ++|.||+.+..
T Consensus 230 ~~~~liHGDl~~~Nil~~~~~-~~lID~e~a~~ 261 (420)
T 2pyw_A 230 RAQALIHGDLHTGSVMVTQDS-TQVIDPEFSFY 261 (420)
T ss_dssp BCCEEECSCCSGGGEEECSSC-EEECCCTTCEE
T ss_pred CCCeEEecCCCCCcEEEeCCC-CEEEeCccccc
Confidence 456799999999999998776 99999999874
|
| >4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0068 Score=72.57 Aligned_cols=100 Identities=8% Similarity=-0.014 Sum_probs=69.5
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEE-eccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f-~D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
-.++|..|...+++.|...||-+|+||++.....|. ..+.|.. .+.-|..+.||- .+++. |.++. .--|+
T Consensus 203 ~fr~Rs~i~~~iR~ff~~~gFlEVeTPiL~~~~gGA--~a~pF~t~~n~~~~~~yL~~--SpqLylk~L~v~---G~~rV 275 (529)
T 4ex5_A 203 TFRARTKAIASIRKFMGDADFMEVETPMLHPIPGGA--AAKPFVTHHNALDMEMFLRI--APELYLKRLIVG---GFERV 275 (529)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCCSS--SSCCCEEEETTTTEEEEECS--CSHHHHHHHHHT---TCSEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEeCCeeeccCCCC--cccccccccccCCcceeccc--CHHHHHHHHHhc---CCCcE
Confidence 467788999999999999999999999995322222 1234432 234467778884 33443 44442 23599
Q ss_pred EEecCeEEcCCCCCCC-CceeEeEEEEeCCC
Q 001059 802 YEISSVYRRAIGHSPP-NRYLQGDFDIIGGA 831 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~ 831 (1170)
|++|++||+|....+. -||+|+.+|.-+.+
T Consensus 276 yeIg~~FR~E~~~~rH~pEFtmlE~e~af~d 306 (529)
T 4ex5_A 276 FEINRNFRNEGVSPRHNPEFTMMEFYAAYTD 306 (529)
T ss_dssp EEEEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred EEeehheecCCCCCCcccHhHhhhhhhhcCC
Confidence 9999999998655333 37999999998753
|
| >3pco_A Phenylalanyl-tRNA synthetase, alpha subunit; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.83 E-value=0.002 Score=72.64 Aligned_cols=96 Identities=11% Similarity=-0.043 Sum_probs=68.0
Q ss_pred hhhHHhHHHHHHHHcCCccccccceec-----cCC--Ccc-cc---cceEEEeccCCceeeecCCCCHHHHHHHHhCCCC
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYL-----LGD--CPQ-FK---RNTVKLLTHGGDLLELSHELRLPFIRWAISNQKS 797 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~-----~~~--~~~-~~---~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~ 797 (1170)
...+.+.++++|...||+++.+|.+.. ... ... .. ...|.+. +..+||..+++..+|.+.. +..
T Consensus 109 ~~~~~~~Ir~if~~~Gf~ev~~~~ve~~~~nFd~Ln~p~dhpaR~~~dt~~i~----e~~vLRThtsp~~lr~l~~-~~~ 183 (327)
T 3pco_A 109 VTRTIDRIESFFGELGFTVATGPEIEDDYHNFDALNIPGHHPARADHDTFWFD----TTRLLRTQTSGVQIRTMKA-QQP 183 (327)
T ss_dssp HHHHHHHHHHHHHTTTCBCCCCCSEECTCCCCCTTTCCSSSHHHHHTTCCBSS----SSCEECSCTHHHHHHHHTT-CCS
T ss_pred HHHHHHHHHHHHHHCCCeEEECCCccCCHHHHHhhCCCCCChhhcccccEEeC----CCceecccCCHHHHHHHHh-CCC
Confidence 456888999999999999999998711 111 011 11 2244442 5679999999999998865 456
Q ss_pred ceeEEEecCeEEcCCCCCCCCceeEeEEEEeC
Q 001059 798 SFKRYEISSVYRRAIGHSPPNRYLQGDFDIIG 829 (1170)
Q Consensus 798 P~r~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG 829 (1170)
|+|+|..|+|||.+......-.|+|+..=++|
T Consensus 184 pirifeiGrVyR~d~d~th~p~fhqlegl~v~ 215 (327)
T 3pco_A 184 PIRIIAPGRVYRNDYDQTHTPMFHQMEGLIVD 215 (327)
T ss_dssp SCCBCCEECCBCSCCBTTBCSBCCEEEEEEEE
T ss_pred CeeEEeeccEEecCCCcccCCcccEEEEEEEC
Confidence 99999999999986333344469998655555
|
| >3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0071 Score=72.66 Aligned_cols=100 Identities=9% Similarity=0.039 Sum_probs=70.9
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEe-ccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
-.++|..|...+++.|...||-+|+||++.-. .++ -..+.|... +.-|..+.||- .+++. |.++. .--|+
T Consensus 175 ~~r~Rs~i~~~iR~f~~~~gF~EVeTPiL~~~-~gG-a~a~~F~t~~~~~~~~~yL~~--SpqL~lk~liv~---g~~rV 247 (521)
T 3bju_A 175 KFIIRSKIITYIRSFLDELGFLEIETPMMNII-PGG-AVAKPFITYHNELDMNLYMRI--APELYHKMLVVG---GIDRV 247 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESS-CCS-SSCCCCEEEETTTTEEEEECS--CSHHHHHHHHHT---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEeCceeecc-CCC-ccccceeeecccCCcceEeeC--CHHHHHHHHHhc---CcCce
Confidence 36678899999999999999999999998532 222 123455432 33478889983 44444 44442 12499
Q ss_pred EEecCeEEcCCCCCCC-CceeEeEEEEeCCC
Q 001059 802 YEISSVYRRAIGHSPP-NRYLQGDFDIIGGA 831 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~ 831 (1170)
|++|++||+|....+. -||+|+.+|.-+.+
T Consensus 248 yeig~~FR~E~~~trH~pEFtmlE~e~af~d 278 (521)
T 3bju_A 248 YEIGRQFRNEGIDLTHNPEFTTCEFYMAYAD 278 (521)
T ss_dssp EEEEEEECCSCCBTTBCSEEEEEEEEEETCC
T ss_pred EEEEcceeCCCCCCccchhhhhhhhhhhcCC
Confidence 9999999998655433 37999999998863
|
| >2odr_B Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0063 Score=73.03 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=54.4
Q ss_pred eeeecCCCCHHHHHHHHh---CCCCceeEEEecCeEEcCCC--CCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~---~~~~P~r~~Y~g~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. ..+..+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTsLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vdF--~DLKGvLE~LL~~L 276 (648)
T 2odr_B 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (648)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999999854444433 44679999999999997542 224578999999999973222 35666777777777
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 277 Gi~ 279 (648)
T 2odr_B 277 GFT 279 (648)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
|
| >2odr_A Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0064 Score=72.99 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=54.3
Q ss_pred eeeecCCCCHHHHHHHHh---CCCCceeEEEecCeEEcCCC--CCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~---~~~~P~r~~Y~g~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. ..+..+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~lr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vdF--~DLKGvLE~LL~~L 276 (665)
T 2odr_A 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (665)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhcCCCCeEEEEEeeEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999999854444433 44679999999999997542 224578999999999973222 35666777777777
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 277 Gi~ 279 (665)
T 2odr_A 277 GFT 279 (665)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
|
| >2odr_D Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0065 Score=73.06 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=54.3
Q ss_pred eeeecCCCCHHHHHHHHh---CCCCceeEEEecCeEEcCCC--CCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~---~~~~P~r~~Y~g~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. ..+..+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~Ef~qLeGlv~G~~vDF--~DLKGvLE~LL~~L 276 (685)
T 2odr_D 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (685)
T ss_dssp SEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhCCCCCeEEEEeccEEecCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999999854444433 44679999999999997542 224578999999999973222 35666777777777
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 277 Gi~ 279 (685)
T 2odr_D 277 GFT 279 (685)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
|
| >2odr_C Phosphoseryl-tRNA synthetase; phosphoserine tRNA synthetase class II, ligase; 3.23A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.007 Score=72.92 Aligned_cols=76 Identities=16% Similarity=0.238 Sum_probs=54.3
Q ss_pred eeeecCCCCHHHHHHHHh---CCCCceeEEEecCeEEcCCC--CCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 776 LLELSHELRLPFIRWAIS---NQKSSFKRYEISSVYRRAIG--HSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 776 ~laLRPD~T~~iaR~~~~---~~~~P~r~~Y~g~VfR~e~~--~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
..+||+.+++.+...+.. ++..|+|+|.+|+|||.+.. ..+..+|+|++.=+.|..-.. .++-.++..+++.|
T Consensus 199 ~sVLRTSLlPGLL~~vr~N~~R~~~pvRLFEIGrVFR~D~~lDath~~EfhqLeGlv~G~~vDF--~DLKGvLE~LL~~L 276 (701)
T 2odr_C 199 KLTLRSHMTSGWFLTVSDLMNKKPLPFKLFSIDRCFRREQKEDKSHLMTYHSASCAIAGEGVDI--NDGKAIAEGLLSQF 276 (701)
T ss_dssp EEEECCCTHHHHHHHHHHHTTTSCSCEEEEEEEEEECCCSCCCSSCCSEEEEEEEEEECTTCCH--HHHHHHHHHHHHTT
T ss_pred cCcccccchhhHHHHHHHHHhCCCCCeEEEEEeeEEccCccccccCCCcceEEEEEEECCCCCH--HHHHHHHHHHHHHc
Confidence 568999999855444443 44679999999999997542 224578999999999973222 35666777777777
Q ss_pred CCC
Q 001059 851 FHA 853 (1170)
Q Consensus 851 gi~ 853 (1170)
|+.
T Consensus 277 Gi~ 279 (701)
T 2odr_C 277 GFT 279 (701)
T ss_dssp TCC
T ss_pred CCC
Confidence 763
|
| >3ig2_A Phenylalanyl-tRNA synthetase beta chain; phers, MCSG, structural genomics, midwest center for structural GE protein structure initiative; HET: MSE; 2.09A {Bacteroides fragilis} | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0078 Score=64.00 Aligned_cols=125 Identities=14% Similarity=0.086 Sum_probs=85.1
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccC---C-CcccccceEEEeccCC-ceeeecCCCCHHHHHHHHhCCC---Ccee
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQK---SSFK 800 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~~~~~~---~P~r 800 (1170)
...+++.+++.+...||.||.|-.|.-.. . .....+...++.++-. +.-+||+.+.+.+.+.++.|.. .++|
T Consensus 6 ~~~~~~~ir~~l~~~G~~Evitysf~~~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~v~ 85 (213)
T 3ig2_A 6 SNKLQNLVAEQLVGCGFNEILNNSLTRAAYYDGLESYPSKNLVMLLNPLSADLNCMRQTLLFGGLESIAHNANRKNADLK 85 (213)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEECGGGGTTCSSSCGGGCEEBSSGGGCSCCEECSCSHHHHHHHHHHC------CCE
T ss_pred HHHHHHHHHHHHHHCCCeEEeccccCCHHHHHhhcccCcCCeEEEeCCcchhHHHHHHHhHHHHHHHHHHHhcCCCCCee
Confidence 34678889999999999999999982211 1 1112245677777764 4558999999999999988643 3699
Q ss_pred EEEecCeEEcCCC-------CCCCCceeEeEEEEeCCC--------CcccHH-HHHHHHHHHHHHcCCC
Q 001059 801 RYEISSVYRRAIG-------HSPPNRYLQGDFDIIGGA--------SALTEA-EVLKVTMDIVTRFFHA 853 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~-------~~~~~ef~Q~GvEiiG~~--------~~~aDa-Evi~la~~~l~~lgi~ 853 (1170)
+|.+|+||+.+.. ..+..|..++++=+.|.. ....|. ++-.++..++..+|+.
T Consensus 86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~dlKg~ve~ll~~lg~~ 154 (213)
T 3ig2_A 86 FFEFGNCYHFDAEKKNPEKVLAPYSEDYHLGLWVTGKMVSNSWAHADENTSVYELKAYVENIFKRLGLD 154 (213)
T ss_dssp EEEEEEEEEECC----------CEEEEEEEEEEEEEEECCSCC----CHHHHHHHHHHHHHHHHHTTBC
T ss_pred EEEeeeEEecCcccccccccccccchhHEEEEEEECCCccccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 9999999997431 123356777887777742 123443 5666667777777775
|
| >4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.011 Score=71.77 Aligned_cols=114 Identities=11% Similarity=0.137 Sum_probs=75.0
Q ss_pred hhhhhhhHHhHHHHHHH-HcCCccccccceeccCCCcccccceEEEec-cCCceeeecCCCCHHHH--HHHHhCCCCcee
Q 001059 725 DTELRDYVVQVTKEMFR-QHCAKHLEIEPMYLLGDCPQFKRNTVKLLT-HGGDLLELSHELRLPFI--RWAISNQKSSFK 800 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~-~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D-~~G~~laLRPD~T~~ia--R~~~~~~~~P~r 800 (1170)
..++|..+...+++.|. ..||-+|+||++.-...+.. .. |.+.. ..|..+.|+- .+++. +.++. . =-|
T Consensus 147 ~lr~Rs~i~~~iR~f~~~~~gF~EVeTPiL~~st~~GA--~~-F~v~~~~~g~~~~L~q--Spql~kq~l~v~-g--~~r 218 (617)
T 4ah6_A 147 NLRLRSQMVMKMREYLCNLHGFVDIETPTLFKRTPGGA--KE-FLVPSREPGKFYSLPQ--SPQQFKQLLMVG-G--LDR 218 (617)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCEECCCCSSBCCCCSSS--CC-CEEECSSTTCEEECCS--STTHHHHHHHHT-S--CSE
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEeCCeeccCCCCCC--cC-ceeccccCCccccccc--CHHHHHHHHHhc-c--cCc
Confidence 36778899999999996 79999999999843222211 12 43322 3467778873 33333 23332 1 239
Q ss_pred EEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHc
Q 001059 801 RYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRF 850 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~l 850 (1170)
+|++|++||.|....++ -||+|+++|.-+.+ --+++.++-+++..+
T Consensus 219 vfqi~~~FR~E~~~t~r~pEFt~lE~e~af~d----~~d~m~~~E~l~~~~ 265 (617)
T 4ah6_A 219 YFQVARCYRDEGSRPDRQPEFTQIDIEMSFVD----QTGIQSLIEGLLQYS 265 (617)
T ss_dssp EEEEEEEECCCSSCSSSCSEEEEEEEEEESCC----HHHHHHHHHHHHHHH
T ss_pred EEEEEhheecccCCCCcCcceecceeeecCCC----HHHHHHHHHHHHHHH
Confidence 99999999998766544 47999999998753 234555555555543
|
| >3ica_A Phenylalanyl-tRNA synthetase beta chain; APC61692.1, phenylalanyl-tRNA SYNT beta subunit, structural genomics, PSI-2; HET: TAM; 2.44A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.55 E-value=0.014 Score=61.92 Aligned_cols=125 Identities=14% Similarity=0.021 Sum_probs=86.8
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccC---C-CcccccceEEEeccCC-ceeeecCCCCHHHHHHHHhCC---CCcee
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQ---KSSFK 800 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~~~~~---~~P~r 800 (1170)
...+++.+++.+...||.||.|-.|.-.. . .....+...++.++-. +.-+||+.+.+.+.+.++.|. ..++|
T Consensus 6 ~~~~~~~ir~~L~~~G~~Evitysf~s~~~~~~~~~~~~~~~v~l~NPls~e~~vmRtsLlpgLL~~~~~N~~r~~~~~~ 85 (213)
T 3ica_A 6 RYKWQTVVSEQLVGAGFNEILNNSLTAGSYYEGLKSHPREMAVELMNPLSQELNCMRQTLLFGGLETLSHNLRRKHLSLY 85 (213)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEEEGGGGTTCSSSCGGGCCBCSSBSCSSEEEECSSSHHHHHHHHHHHHTTTCSEEE
T ss_pred HHHHHHHHHHHHHHCCCceeeeccCCCHHHHhhhcccCcCCeEEecCCccHHHHHHHHHhHHHHHHHHHHHHcCCCCCee
Confidence 44688899999999999999999992211 1 1112234566777764 455899999999999888742 33699
Q ss_pred EEEecCeEEcCCC-------CCCCCceeEeEEEEeCCC--------CcccHH-HHHHHHHHHHHHcCCC
Q 001059 801 RYEISSVYRRAIG-------HSPPNRYLQGDFDIIGGA--------SALTEA-EVLKVTMDIVTRFFHA 853 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~-------~~~~~ef~Q~GvEiiG~~--------~~~aDa-Evi~la~~~l~~lgi~ 853 (1170)
+|.+|+||+.+.. .++..|..++++=+.|.. ....|. ++-.++..++..+|+.
T Consensus 86 lFEiG~Vf~~~~~~~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~df~d~Kg~ve~ll~~lgi~ 154 (213)
T 3ica_A 86 LFEWGKCYRFHAAKRTDETPLAAYAEDDRLGIWICGQRVHNSWAHPEEPTSVFELKAVVEQVLCRVGIE 154 (213)
T ss_dssp EEEEEEEEEEECCCC--CCSSCEEEEEEEEEEEEEEBCCC-----CCCBCCHHHHHHHHHHHHHHTTCC
T ss_pred EEEeeeEEecCCccccccccccccchhhEEEEEEeCCCCcccCCCCCCCcCHHHHHHHHHHHHHHhCCC
Confidence 9999999997431 122356777877777742 223453 6666777778888875
|
| >3i7f_A Aspartyl-tRNA synthetase; tRNA ligase, APO, ATP-binding, aminoacyl-tRNA synthetase, LI nucleotide-binding, protein biosynthesis; 2.80A {Entamoeba histolytica} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.011 Score=71.07 Aligned_cols=97 Identities=8% Similarity=0.039 Sum_probs=60.0
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHH--HHHHhCCCCceeE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFI--RWAISNQKSSFKR 801 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~ia--R~~~~~~~~P~r~ 801 (1170)
.-.+++..+...+++.|...||-+|+||++.-... + -..+.|.+ +--|+.+.|+- .+++. |.++. .--|+
T Consensus 242 ~~~r~Rs~i~~~iR~ff~~~gF~EVeTPiL~~~~~-e-gga~~F~v-~~~~~~~yL~~--Spql~~k~ll~~---g~~rV 313 (548)
T 3i7f_A 242 AIFRIQSACCGLFREFLTSQKFVEIHTPKLIGCSS-E-GGSNIFEV-KYFDRKAYLAQ--SPQLYKQMAIMG---DFRKV 313 (548)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSBC----------------------CCBCS--CTHHHHHHHHTT---TCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEEeCCEEecccC-C-CCcceeEE-ecCCCceEecc--CHHHHHHHHHhc---CcCcE
Confidence 34677889999999999999999999999833221 1 11234542 22345567774 34554 34432 23599
Q ss_pred EEecCeEEcCCCCCCC--CceeEeEEEEe
Q 001059 802 YEISSVYRRAIGHSPP--NRYLQGDFDII 828 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~--~ef~Q~GvEii 828 (1170)
|++|++||.|.....+ -||+|+++|.-
T Consensus 314 feI~~~FR~E~~~t~RHl~EFtmlE~e~a 342 (548)
T 3i7f_A 314 FEVGPVFRAENSNTRRHLTEFEGLDIEME 342 (548)
T ss_dssp EEEEEECCCSCCCSSSCCSCEEEEEEEEE
T ss_pred EEEeeeEecCCCCCCCcchhhhchhhhhh
Confidence 9999999998765333 48999999973
|
| >3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=96.24 E-value=0.02 Score=63.73 Aligned_cols=29 Identities=21% Similarity=0.252 Sum_probs=25.1
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
.++|+|+.|.||| ..++.+.|+||..+..
T Consensus 174 ~l~HgDl~~~Nil-~~~~~~~lID~e~a~~ 202 (301)
T 3dxq_A 174 AACHCDPLCENFL-DTGERMWIVDWEYSGM 202 (301)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eeeccCCCcCCEE-ECCCCEEEEecccccC
Confidence 4899999999999 5667889999998863
|
| >3l4g_B Phenylalanyl-tRNA synthetase beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix acetylation, aminoacyl-tRNA synthetase; HET: PHE; 3.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.024 Score=69.31 Aligned_cols=102 Identities=9% Similarity=0.017 Sum_probs=74.7
Q ss_pred hhHHhHHHHHHHHcCCccccccceec----cCC-C-cccccceEEEeccCC-ceeeecCCCCHHHHHHHHhCCC--Ccee
Q 001059 730 DYVVQVTKEMFRQHCAKHLEIEPMYL----LGD-C-PQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISNQK--SSFK 800 (1170)
Q Consensus 730 ~~I~~~i~~~f~~~Gy~~I~tP~~~~----~~~-~-~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~~~~~~--~P~r 800 (1170)
+.+.+.+++++...||+|+.|+.|.- ... + .......+++.++-. +.-+||+.+.+.+.+.++.|.. .|+|
T Consensus 394 ~~~~~~ir~~l~~~Gf~Evitysf~s~~~~~~~l~~~~~~~~~v~L~NPis~e~svmRtsLlpgLL~~l~~N~~~~~~vr 473 (589)
T 3l4g_B 394 NKLTELLRHDMAAAGFTEALTFALCSQEDIADKLGVDISATKAVHISNPKTAEFQVARTTLLPGLLKTIAANRKMPLPLK 473 (589)
T ss_dssp HHHHHHHHHHHHHTTCEECCCCSEECHHHHTGGGTSCTTSSCCCBBSSCSSGGGSEECSCSHHHHHHHHHHTTTSCSCEE
T ss_pred HHHHHHHHHHHHHCCCEEEecCcccCHHHHHHHhCCCCCCCCeEEEcCCCchhHhHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 45678899999999999999999921 111 1 111134566777765 4458999999999999987643 4899
Q ss_pred EEEecCeEEcCCC-CCCCCceeEeEEEEeCCC
Q 001059 801 RYEISSVYRRAIG-HSPPNRYLQGDFDIIGGA 831 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~-~~~~~ef~Q~GvEiiG~~ 831 (1170)
+|.+|+|||.+.. ..+.+++.|+++-+.|..
T Consensus 474 lFEiG~Vf~~d~~~~~~~~e~~~la~~~~g~~ 505 (589)
T 3l4g_B 474 LFEISDIVIKDSNTDVGAKNYRHLCAVYYNKN 505 (589)
T ss_dssp EEEEEEEEEECTTSTTSEEEEEEEEEEEESSS
T ss_pred EEEeeeEEecCCccccCCccccEEEEEEECCC
Confidence 9999999997432 234457889988888854
|
| >3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.037 Score=62.32 Aligned_cols=58 Identities=17% Similarity=0.103 Sum_probs=42.8
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC---CCceeEEEEE
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH---QHVVRYYQAW 423 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H---pnIV~l~~~~ 423 (1170)
-.+.|+.|.+..+|+... ++..+++|+.... ....+.+|+..|+.|.. ..+++++...
T Consensus 40 ~~~~l~gG~~n~~y~v~~--~~~~~vlK~~~~~-----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~ 100 (312)
T 3jr1_A 40 HKEKLYSGEMNEIWLIND--EVQTVFVKINERS-----YRSMFRAEADQLALLAKTNSINVPLVYGIG 100 (312)
T ss_dssp EEEEECCSSSSEEEEEES--SSCEEEEEEEEGG-----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEE
T ss_pred eeEEeCCccceeeeEEEE--CCCeEEEEeCCcc-----cHHHHHHHHHHHHHHHhhCCCCcceEEEEe
Confidence 357899999999999875 4778999987532 24568899999998842 4566666543
|
| >3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX} | Back alignment and structure |
|---|
Probab=95.79 E-value=0.092 Score=57.91 Aligned_cols=54 Identities=19% Similarity=0.172 Sum_probs=41.0
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 412 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~ 412 (1170)
...-++.+|.|..+.||+.... +|+.|++|+-+.... .....+.+|+..|+.|.
T Consensus 16 ~v~~v~~~g~G~~~~vyrv~l~-DG~~~~vK~~~~~~~--~~~~~~~~Ea~~L~~L~ 69 (288)
T 3f7w_A 16 EVAAVAERGHSHRWHLYRVELA-DGTPLFVKALPDDAP--ALDGLFRAEALGLDWLG 69 (288)
T ss_dssp CEEEEEEEEEETTEEEEEEEET-TSCEEEEEECCTTCC--CCTTHHHHHHHHHHHHT
T ss_pred CeEEEEecCCCCCeEEEEEEEC-CCCEEEEEEeCCCCc--chhhHHHHHHHHHHHHH
Confidence 3455788999999999999875 799999997653322 22345788999999884
|
| >3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.022 Score=64.36 Aligned_cols=31 Identities=26% Similarity=0.443 Sum_probs=27.3
Q ss_pred CCccccCCCCCceeecCC----CCEEEeecCcchh
Q 001059 512 QGIIHRDLTPNNIFFDAR----NDIKIGDFGLAKF 542 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~----~~vKL~DFGlA~~ 542 (1170)
..++|+|+.+.|||++.+ +.+.|.||+.+..
T Consensus 183 ~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~ 217 (333)
T 3csv_A 183 MVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKL 217 (333)
T ss_dssp CEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEE
T ss_pred CeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCc
Confidence 469999999999999875 6799999999874
|
| >2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=95.55 E-value=0.025 Score=63.40 Aligned_cols=50 Identities=6% Similarity=0.020 Sum_probs=31.1
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H 413 (1170)
..++.|+.|....+|++... +..+++|+..... . ...+..|+.+++.+..
T Consensus 25 ~~~~~i~~G~~n~~~~v~~~--~g~~vlk~~~~~~-~---~~~l~~e~~~l~~L~~ 74 (322)
T 2ppq_A 25 TSYKGIAEGVENSNFLLHTT--KDPLILTLYEKRV-E---KNDLPFFLGLMQHLAA 74 (322)
T ss_dssp EEEEEECC---EEEEEEEES--SCCEEEEEECC-------CCHHHHHHHHHHHHHH
T ss_pred eEeeccCCCcccceEEEEeC--CccEEEEEeCCCC-C---HHHHHHHHHHHHHHHH
Confidence 34577888998999998764 3368899886421 1 2345678888887743
|
| >1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6 | Back alignment and structure |
|---|
Probab=95.42 E-value=0.07 Score=59.82 Aligned_cols=48 Identities=27% Similarity=0.306 Sum_probs=33.0
Q ss_pred eeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC
Q 001059 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H 413 (1170)
..|+ |....||++... +|+.+++|..+....+ ...+..|+.+++.+..
T Consensus 32 ~~l~-g~~n~~y~v~~~-~g~~~vlK~~~~~~~~---~~~~~~E~~~~~~L~~ 79 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDE-DRRRFVVKFYRPERWT---ADQILEEHQFALQLVN 79 (328)
T ss_dssp EEEC-CSSSEEEEECCT-TCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHH
T ss_pred Eeec-CcccceEEEEcC-CCCEEEEEEcCCCCCC---HHHHHHHHHHHHHHHH
Confidence 4566 778899987653 5668999998633222 3456778888888853
|
| >3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.041 Score=63.11 Aligned_cols=28 Identities=29% Similarity=0.429 Sum_probs=24.2
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcch
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAK 541 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~ 541 (1170)
.++|+|+++.|||++.++ +.|+||..|.
T Consensus 213 ~l~HgDl~~~Nil~~~~~-~~lID~e~a~ 240 (369)
T 3c5i_A 213 VFCHNDLQENNIINTNKC-LRLIDFEYSG 240 (369)
T ss_dssp EEECSCCCGGGEEECC-C-EEECCCTTCE
T ss_pred EEEeCCCCcccEEecCCc-EEEEEecCCC
Confidence 589999999999998654 8999999886
|
| >3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.063 Score=62.09 Aligned_cols=60 Identities=13% Similarity=0.135 Sum_probs=34.5
Q ss_pred eeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCC-ceeEEEEE
Q 001059 361 QPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH-VVRYYQAW 423 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~-------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~Hpn-IV~l~~~~ 423 (1170)
+.|..|-...+|++.... +++.|++|+... .. .....+.+|..+++.+..-+ ..++++.+
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~--~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~ 123 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGA--IL-QGVDSLVLESVMFAILAERSLGPQLYGVF 123 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC------CCHHHHHHHHHHHHHHHHTTSSCCEEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCC--cc-chHHHHHHHHHHHHHHHhcCCCCeEEEEc
Confidence 567778888899988742 357899998532 11 12345679999998885333 34566544
|
| >1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8 | Back alignment and structure |
|---|
Probab=95.00 E-value=0.15 Score=59.95 Aligned_cols=61 Identities=11% Similarity=0.264 Sum_probs=41.6
Q ss_pred EEeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCc-eeEEEEE
Q 001059 359 ELQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV-VRYYQAW 423 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~-------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnI-V~l~~~~ 423 (1170)
.++.|+.|-...||++.... ++..|++|+.... .. ...+.+|..+++.+...++ .++++.+
T Consensus 77 ~v~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~-~~---~~~li~E~~~l~~L~~~g~~P~l~~~~ 145 (429)
T 1nw1_A 77 RISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP-ET---ESHLVAESVIFTLLSERHLGPKLYGIF 145 (429)
T ss_dssp EEEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC-CC---HHHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred EEEEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC-Cc---HHHHHHHHHHHHHHHhCCCCCcEEEEe
Confidence 35678889999999998752 2578999987421 11 1456689999998854444 4566554
|
| >2rhq_B Phenylalanyl-tRNA synthetase beta chain; heterotetramer, phenylalanine, aminoacyl-tRNA synthetase, ATP-binding, cytoplasm, ligase; HET: GAX; 2.20A {Staphylococcus haemolyticus} PDB: 2rhs_B* | Back alignment and structure |
|---|
Probab=94.86 E-value=0.1 Score=65.97 Aligned_cols=103 Identities=16% Similarity=0.096 Sum_probs=74.8
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccCCCcc--cccc-eEEEeccCC-ceeeecCCCCHHHHHHHHhC---CCCceeE
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQ--FKRN-TVKLLTHGG-DLLELSHELRLPFIRWAISN---QKSSFKR 801 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~--~~~~-my~f~D~~G-~~laLRPD~T~~iaR~~~~~---~~~P~r~ 801 (1170)
.+.+.+.+++.+...||+|+.|..|.-...... .... .+++.++-. +.-+||+.+.+.+.+.++.| +..|+|+
T Consensus 495 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~~~~~~v~L~NPis~e~svLRtsLlpgLL~~l~~N~~r~~~~vrl 574 (795)
T 2rhq_B 495 RQHKTRTLKETLEGAGLNQAITYSLVSKDHAKDFALQERPTISLLMPMSEAHATLRQSLLPHLIEATAYNVARKNKDVRL 574 (795)
T ss_dssp HHHHHHHHHHHHHHTTCEECCCCSEECTTTTTTTCSSCCCCEECSSCSCTTSSEECSCSHHHHHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEecCCccCHHHHHhhCCCCCceEEEcCCCchhhhhhhhccHHHHHHHHHHHhcCCCCCeEE
Confidence 446788899999999999999999822211100 1234 577777764 45589999999999998874 3569999
Q ss_pred EEecCeEEcCCCCCCCCceeEeEEEEeCCC
Q 001059 802 YEISSVYRRAIGHSPPNRYLQGDFDIIGGA 831 (1170)
Q Consensus 802 ~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~ 831 (1170)
|.+|+|||.+.......|++|+++=+.|..
T Consensus 575 FEiG~Vf~~d~~~~~~~e~~~la~l~~G~~ 604 (795)
T 2rhq_B 575 YEIGRVFFGNGEGELPDEVEYLSGILTGEY 604 (795)
T ss_dssp EEEEEEEECCCTTSCCEEEEEEEEEEESEE
T ss_pred EEEeeEEecCCcccCcchhhEEEEEEEecc
Confidence 999999995322101267999999888853
|
| >2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax} | Back alignment and structure |
|---|
Probab=94.25 E-value=0.35 Score=57.32 Aligned_cols=62 Identities=16% Similarity=0.178 Sum_probs=39.6
Q ss_pred EEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCc-eeEEEEE
Q 001059 359 ELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV-VRYYQAW 423 (1170)
Q Consensus 359 ~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnI-V~l~~~~ 423 (1170)
.++.|+.|-...+|++.....+..|++|+....... . -...+|..+++.|...++ .++++.+
T Consensus 112 ~i~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~--~-idR~~E~~vl~~L~~~gl~P~ll~~~ 174 (458)
T 2qg7_A 112 EFQIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE--I-INREREKKISCILYNKNIAKKIYVFF 174 (458)
T ss_dssp EEEEECC--CEEEEEEEETTTTEEEEEEEECC-CCS--C-SCHHHHHHHHHHHTTSSSBCCEEEEE
T ss_pred EEEEcCCCeEeEEEEEEECCCCceEEEEECCCChhh--h-cCHHHHHHHHHHHHhcCCCCCEEEEe
Confidence 356788899999999987643578999987432111 1 112579999999965555 4566554
|
| >3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A* | Back alignment and structure |
|---|
Probab=93.75 E-value=0.26 Score=55.88 Aligned_cols=31 Identities=19% Similarity=0.312 Sum_probs=27.7
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
..++|+|+.+.|||++.++.+.|.||+.+..
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e~~~~ 236 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWDEPML 236 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCSSCEE
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECCCCee
Confidence 3589999999999999888899999998864
|
| >1b7y_B Phers, protein (phenylalanyl-tRNA synthetase); enzyme, alpha/beta homodimer, ligase; HET: FYA; 2.50A {Thermus thermophilus} SCOP: a.6.1.1 a.6.1.1 b.40.4.4 b.153.1.1 d.58.13.1 d.104.1.1 PDB: 1b70_B* 1eiy_B 1jjc_B* 1pys_B 2akw_B* 2aly_B* 2amc_B* 3hfz_B* 3teh_B* 2iy5_B* | Back alignment and structure |
|---|
Probab=93.27 E-value=0.2 Score=63.06 Aligned_cols=95 Identities=13% Similarity=0.018 Sum_probs=72.7
Q ss_pred hhhHHhHHHHHHHHcCCccccccceeccC---CCcccccceEEEeccCC-ceeeecCCCCHHHHHHHHhC---C-CCcee
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPMYLLG---DCPQFKRNTVKLLTHGG-DLLELSHELRLPFIRWAISN---Q-KSSFK 800 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~~~~~~~~my~f~D~~G-~~laLRPD~T~~iaR~~~~~---~-~~P~r 800 (1170)
.+.+.+.+++.+...||+|+.|-.|.-.. .... ....+++.++-. +.-+||+.+.+.+.+.++.| + ..|+|
T Consensus 491 ~~~~~~~ir~~L~~~Gf~Evitysfvs~~~~~~l~~-~~~~v~L~NPis~d~svLRtsLlpgLL~~l~~N~~r~~~~~vr 569 (785)
T 1b7y_B 491 PYRKEQRLREVLSGLGFQEVYTYSFMDPEDARRFRL-DPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERAL 569 (785)
T ss_dssp HHHHHHHHHHHHHHHTCEECCCCSEECTTHHHHTTC-CCCSCEESSCSSTTSSEECSCSHHHHHHHHHHHHHHSCCSCEE
T ss_pred HHHHHHHHHHHHHHCCCEEEecCcccCHHHHHhcCC-CCCeEEEcCCCchhhhhhhhhhHHHHHHHHHHHhhcCCCCCeE
Confidence 44678889999999999999999882211 1110 234466777664 44589999999999998875 4 57999
Q ss_pred EEEecCeEEcCCCCCCCCceeEeEEEEeCCC
Q 001059 801 RYEISSVYRRAIGHSPPNRYLQGDFDIIGGA 831 (1170)
Q Consensus 801 ~~Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~ 831 (1170)
+|.+|+||| + .|+.|+++=+.|..
T Consensus 570 lFEiG~Vf~-~------~e~~~lagl~~G~~ 593 (785)
T 1b7y_B 570 LFEVGRVFR-E------REETHLAGLLFGEG 593 (785)
T ss_dssp EEEEEEEES-S------SEEEEEEEEEESSC
T ss_pred EEEEeeeec-c------ChhhEEEEEEECCC
Confidence 999999999 2 78999999999964
|
| >3cmq_A Phenylalanyl-tRNA synthetase, mitochondrial; classii aarss fold, RRM domain, RNA recogntion, aminoacyl-tRNA synthetase, ATP-binding, ligase; HET: FA5; 2.20A {Homo sapiens} PDB: 3hfv_A* 3teg_A* 3tup_A | Back alignment and structure |
|---|
Probab=90.59 E-value=0.92 Score=52.80 Aligned_cols=91 Identities=14% Similarity=0.023 Sum_probs=61.0
Q ss_pred hhHHhHHHHHHHHc--------CCccccc-cce-----ec--cCC--Ccc--cccceEEEeccCCceeeecCCCCHHHHH
Q 001059 730 DYVVQVTKEMFRQH--------CAKHLEI-EPM-----YL--LGD--CPQ--FKRNTVKLLTHGGDLLELSHELRLPFIR 789 (1170)
Q Consensus 730 ~~I~~~i~~~f~~~--------Gy~~I~t-P~~-----~~--~~~--~~~--~~~~my~f~D~~G~~laLRPD~T~~iaR 789 (1170)
..+.+.++++|... ||+++.+ |.+ .| +.. ... .....|.+. +..+||.-.++..+|
T Consensus 51 ~~~~~~i~~~f~~~~~~~~g~~Gf~e~~~~~~v~s~~~NFd~L~~p~dHpaR~~~Dtfyi~----~~~vLRThts~~~~~ 126 (415)
T 3cmq_A 51 WLIKERVKEHFYKQYVGRFGTPLFSVYDNLSPVVTTWQNFDSLLIPADHPSRKKGDNYYLN----RTHMLRAHTSAHQWD 126 (415)
T ss_dssp HHHHHHHHHHHHHHHHHCSSSCCCEEECCCCSEEEHHHHTGGGTCCTTCGGGCGGGSCBSS----SSEEECSSGGGGHHH
T ss_pred HHHHHHHHHHHHhhhccccCCCCcEEEcCCCccccHHHHHHHhCCCCCCCcccccceEEec----CCeEEcCCCcHHHHH
Confidence 45667777777666 9999998 666 11 111 111 113445442 457999999999999
Q ss_pred HHHhCCCCceeEEEecCeEEcCC-CCCCCCceeEeE-EEE
Q 001059 790 WAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGD-FDI 827 (1170)
Q Consensus 790 ~~~~~~~~P~r~~Y~g~VfR~e~-~~~~~~ef~Q~G-vEi 827 (1170)
.+..+ .| |++..|.|||++. .......|+|.. +-+
T Consensus 127 ~l~~~--~~-k~~~~G~VyR~D~~da~h~n~fhQ~egv~l 163 (415)
T 3cmq_A 127 LLHAG--LD-AFLVVGDVYRRDQIDSQHYPIFHQLEAVRL 163 (415)
T ss_dssp HHHTT--CS-EEEEEEEEECCCCCBTTBCSEEEEEEEEEE
T ss_pred HHHHC--CC-CEEEeeeEEeccchhhhhhHHhcCCCcEEE
Confidence 98765 35 9999999999863 345566787765 444
|
| >3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=89.14 E-value=0.72 Score=54.00 Aligned_cols=29 Identities=28% Similarity=0.555 Sum_probs=26.1
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
.++|+|+.+.||+ +.++.+.|+||..|..
T Consensus 263 ~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 263 VFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp EEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred eEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 4899999999999 7788999999999874
|
| >3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A* | Back alignment and structure |
|---|
Probab=85.32 E-value=2.2 Score=49.41 Aligned_cols=29 Identities=21% Similarity=0.488 Sum_probs=25.1
Q ss_pred ccccCCCCCceee------cCCCCEEEeecCcchh
Q 001059 514 IIHRDLTPNNIFF------DARNDIKIGDFGLAKF 542 (1170)
Q Consensus 514 IiHrDLKp~NILi------~~~~~vKL~DFGlA~~ 542 (1170)
++|+|+.+.|||+ +.+..+.++||-.|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 6899999999999 3456799999999874
|
| >3pco_B Phenylalanyl-tRNA synthetase, beta chain; aminoacylation, tRNA-binding, DNA-binding domain, four-helix aminoacyl-tRNA synthetase, ATP-binding; HET: PHE AMP; 3.02A {Escherichia coli} | Back alignment and structure |
|---|
Probab=83.94 E-value=1.9 Score=54.40 Aligned_cols=120 Identities=8% Similarity=-0.059 Sum_probs=80.9
Q ss_pred hHHhHHHHHHHHcCCccccccceeccC---C-CcccccceEEEeccCCc-eeeecCCCCHHHHHHHHhCC---CCceeEE
Q 001059 731 YVVQVTKEMFRQHCAKHLEIEPMYLLG---D-CPQFKRNTVKLLTHGGD-LLELSHELRLPFIRWAISNQ---KSSFKRY 802 (1170)
Q Consensus 731 ~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~-~~~~~~~my~f~D~~G~-~laLRPD~T~~iaR~~~~~~---~~P~r~~ 802 (1170)
...+.+++.+...||.|+.|-.|.-.. . + ..++..++.++-.. .=+||+.+-+.+...++.|. ..++|+|
T Consensus 493 ~~~~~~r~~l~~~G~~Evitysf~~~~~~~~~~--~~~~~v~l~NPis~e~svmRtsLlpgLL~~~~~N~~r~~~~v~lF 570 (795)
T 3pco_B 493 LSLKRVKTLLNDKGYQEVITYSFVDPKVQQMIH--PGVEALLLPSPISVEMSAMRLSLWTGLLATVVYNQNRQQNRVRIF 570 (795)
T ss_dssp CCHHHHHHHHHHTTCEECCCCSEECHHHHHHHS--SSCCCCBCSSCSCSTTCEECSSSHHHHHHHHHHHHTSSCCCCEEE
T ss_pred HHHHHHHHHHHHCCCeeeeccCcCCHHHHHhhC--CCCCeEEEcCCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCccEE
Confidence 356678889999999999999982111 1 1 12344566776654 44899999999999888743 3479999
Q ss_pred EecCeEEcCCC-CCCCCceeEeEEEEeCCCC--------cccHH-HHHHHHHHHHHHcCC
Q 001059 803 EISSVYRRAIG-HSPPNRYLQGDFDIIGGAS--------ALTEA-EVLKVTMDIVTRFFH 852 (1170)
Q Consensus 803 Y~g~VfR~e~~-~~~~~ef~Q~GvEiiG~~~--------~~aDa-Evi~la~~~l~~lgi 852 (1170)
.+|+||+.... ..+..|...+++=+.|... ...|. ++-.++..++..+|+
T Consensus 571 EiG~Vf~~~~~~~~~~~e~~~la~~~~G~~~~~~w~~~~~~~dF~dlKg~ve~ll~~lg~ 630 (795)
T 3pco_B 571 ESGLRFVPDTQAPLGIRQDLMLAGVICGNRYEEHWNLAKETVDFYDLKGDLESVLDLTGK 630 (795)
T ss_dssp EEEEEEEECTTSSTTEEEEEEEEEEEESBSSCSCSSSCCCBCCHHHHHHHHHHHTTTSSC
T ss_pred EeeeEEecCCCcccCcchhheEEEEEECCCcccccccCCCCCCHHHHHHHHHHHHHHcCC
Confidence 99999996432 2344567777777777532 23454 455555566666665
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1170 | ||||
| d1nvra_ | 271 | d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 { | 1e-58 | |
| d2j4za1 | 263 | d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur | 2e-55 | |
| d1u5ra_ | 309 | d.144.1.7 (A:) Serine/threonine protein kinase TAO | 4e-55 | |
| d2java1 | 269 | d.144.1.7 (A:3-271) Serine/threonine-protein kinas | 2e-54 | |
| d1t4ha_ | 270 | d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa | 6e-53 | |
| d1yhwa1 | 293 | d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [ | 5e-52 | |
| d1koaa2 | 350 | d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C | 1e-51 | |
| d2jfla1 | 288 | d.144.1.7 (A:21-308) STE20-like serine/threonine-p | 2e-51 | |
| d1s9ja_ | 322 | d.144.1.7 (A:) Dual specificity mitogen-activated | 5e-51 | |
| d3blha1 | 318 | d.144.1.7 (A:8-325) Cell division protein kinase 9 | 1e-50 | |
| d1uu3a_ | 288 | d.144.1.7 (A:) 3-phosphoinositide dependent protei | 1e-49 | |
| d1koba_ | 352 | d.144.1.7 (A:) Twitchin, kinase domain {California | 2e-49 | |
| d1uwha_ | 276 | d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) | 3e-49 | |
| d1phka_ | 277 | d.144.1.7 (A:) gamma-subunit of glycogen phosphory | 9e-49 | |
| d1a06a_ | 307 | d.144.1.7 (A:) Calmodulin-dependent protein kinase | 3e-48 | |
| d1tkia_ | 321 | d.144.1.7 (A:) Titin, kinase domain {Human (Homo s | 6e-48 | |
| d1o6ya_ | 277 | d.144.1.7 (A:) Mycobacterial protein kinase PknB, | 8e-48 | |
| d1k2pa_ | 258 | d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum | 4e-46 | |
| d1jksa_ | 293 | d.144.1.7 (A:) Death-associated protein kinase, Da | 5e-46 | |
| d1xjda_ | 320 | d.144.1.7 (A:) Protein kinase C, theta type {Human | 8e-46 | |
| d1byga_ | 262 | d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) | 1e-45 | |
| d1xwsa_ | 273 | d.144.1.7 (A:) Proto-oncogene serine/threonine-pro | 2e-45 | |
| d1jpaa_ | 299 | d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou | 2e-44 | |
| d1ua2a_ | 299 | d.144.1.7 (A:) Cell division protein kinase 7, CDK | 2e-44 | |
| d2ozaa1 | 335 | d.144.1.7 (A:51-385) MAP kinase activated protein | 3e-44 | |
| d1omwa3 | 364 | d.144.1.7 (A:186-549) G-protein coupled receptor k | 6e-44 | |
| d1qpca_ | 272 | d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom | 7e-44 | |
| d1lufa_ | 301 | d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n | 7e-44 | |
| d1sm2a_ | 263 | d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu | 9e-44 | |
| d1xkka_ | 317 | d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb- | 1e-43 | |
| d1gz8a_ | 298 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H | 1e-43 | |
| d1q5ka_ | 350 | d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs | 2e-43 | |
| d1xbba_ | 277 | d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human | 3e-43 | |
| d1fota_ | 316 | d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni | 7e-43 | |
| d1fvra_ | 309 | d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [ | 9e-43 | |
| d1ob3a_ | 286 | d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod | 1e-42 | |
| d1u46a_ | 273 | d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum | 2e-42 | |
| d1ckia_ | 299 | d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n | 3e-42 | |
| d1pmea_ | 345 | d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien | 4e-42 | |
| d1rjba_ | 325 | d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s | 1e-41 | |
| d1opja_ | 287 | d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou | 1e-41 | |
| d1o6la_ | 337 | d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap | 1e-41 | |
| d1cm8a_ | 346 | d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s | 1e-41 | |
| d1unla_ | 292 | d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H | 1e-41 | |
| d1fmka3 | 285 | d.144.1.7 (A:249-533) c-src tyrosine kinase {Human | 1e-41 | |
| d1u59a_ | 285 | d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum | 7e-41 | |
| d1r0pa_ | 311 | d.144.1.7 (A:) Hepatocyte growth factor receptor, | 1e-40 | |
| d1vzoa_ | 322 | d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5 | 3e-40 | |
| d1csna_ | 293 | d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast | 3e-39 | |
| d1mp8a_ | 273 | d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma | 7e-39 | |
| d1mqba_ | 283 | d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum | 8e-39 | |
| d1blxa_ | 305 | d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H | 2e-38 | |
| d2b1pa1 | 355 | d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3 | 2e-38 | |
| d2gfsa1 | 348 | d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa | 2e-38 | |
| d1rdqe_ | 350 | d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni | 5e-38 | |
| d1t46a_ | 311 | d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens | 3e-37 | |
| d1vjya_ | 303 | d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human | 2e-36 | |
| d3bqca1 | 328 | d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu | 4e-36 | |
| d1ywna1 | 299 | d.144.1.7 (A:818-1166) Vascular endothelial growth | 3e-34 | |
| d1p4oa_ | 308 | d.144.1.7 (A:) Insulin-like growth factor 1 recept | 1e-33 | |
| d1fgka_ | 299 | d.144.1.7 (A:) Fibroblast growth factor receptor 1 | 4e-33 | |
| d1q8ya_ | 362 | d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces | 1e-24 | |
| d1zara2 | 191 | d.144.1.9 (A:91-281) Rio2 serine protein kinase C- | 4e-14 | |
| d1ukxa_ | 137 | d.20.1.3 (A:) EIF2-alpha kinase 4 (GCN2-like prote | 8e-11 | |
| d2daya1 | 115 | d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF | 2e-10 | |
| d1usya_ | 275 | d.104.1.1 (A:) ATP phosphoribosyltransferase regul | 2e-10 | |
| d1h4vb2 | 324 | d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisR | 4e-08 | |
| d1wu7a2 | 327 | d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisR | 8e-08 | |
| d2vgla_ | 584 | a.118.1.10 (A:) Adaptin alpha C subunit N-terminal | 1e-07 | |
| d1qe0a2 | 325 | d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisR | 1e-05 | |
| d1kmma2 | 322 | d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisR | 4e-05 | |
| d2daxa1 | 140 | d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 | 5e-05 | |
| d2dawa1 | 141 | d.20.1.3 (A:8-148) RWD domain-containing protein 2 | 1e-04 | |
| d1z7ma1 | 318 | d.104.1.1 (A:6-323) ATP phosphoribosyltransferase | 2e-04 |
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 200 bits (510), Expect = 1e-58
Identities = 72/312 (23%), Positives = 124/312 (39%), Gaps = 58/312 (18%)
Query: 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ 412
++ D++ +Q LG G +G V L N++ AVK + +++ + I +E+ L
Sbjct: 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVD-MKRAVDCPENIKKEICINKMLN 61
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H++VV++Y E Y+
Sbjct: 62 HENVVKFYGHRRE----------------------------------------GNIQYLF 81
Query: 473 MEYCPRTL-RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
+EYC E + A F Q++ G+ ++HG GI HRD+ P N+ D R++
Sbjct: 82 LEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDN 141
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+KI DFGLA + ++ GT Y APE+ + E D
Sbjct: 142 LKISDFGLATVFRYNNRERLL-------------NKMCGTLPYVAPELLKRREFHAEPVD 188
Query: 592 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
++S GIV + P+ + SD K+K W S +LL +++ +P
Sbjct: 189 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENP 248
Query: 649 SDRPSATELLQD 660
S R + ++ +D
Sbjct: 249 SARITIPDIKKD 260
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 191 bits (487), Expect = 2e-55
Identities = 70/312 (22%), Positives = 121/312 (38%), Gaps = 66/312 (21%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQ 412
L DFE +PLG G FG+V L + K A+K + + V ++ REV S L+
Sbjct: 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR 64
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H +++R Y + + +Y+
Sbjct: 65 HPNILRLYGYFHDAT----------------------------------------RVYLI 84
Query: 473 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
+EY P T+ + + FD++ ++ L++ H + +IHRD+ P N+ + +
Sbjct: 85 LEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE 144
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+KI DFG + + GT Y PE+ +G DEK D
Sbjct: 145 LKIADFGWSVHAPSSRRTT-----------------LCGTLDYLPPEMIEGRM-HDEKVD 186
Query: 592 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
++SLG++ +E PF ++ + + P L+ RL+ +P
Sbjct: 187 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPDFVTEGA---RDLISRLLKHNP 243
Query: 649 SDRPSATELLQD 660
S RP E+L+
Sbjct: 244 SQRPMLREVLEH 255
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 192 bits (488), Expect = 4e-55
Identities = 74/354 (20%), Positives = 127/354 (35%), Gaps = 75/354 (21%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRLQHQH 415
F +L+ +GHG FG V ++ + A+KK+ K I++EV L +L+H +
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
++Y + ++ MEY
Sbjct: 77 TIQYRGCYLREH----------------------------------------TAWLVMEY 96
Query: 476 CPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
C + + E + + + ++GLA++H +IHRD+ NI +K+
Sbjct: 97 CLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKL 156
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP--KIDEKADM 592
GDFG A + VGT ++ APE+ + D K D+
Sbjct: 157 GDFGSASIMA-------------------PANSFVGTPYWMAPEVILAMDEGQYDGKVDV 197
Query: 593 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSP 648
+SLGI EL P + + E P +SE + + + P
Sbjct: 198 WSLGITCIELAERKPPLFNMNAMSAL--YHIAQNESPALQSGHWSEYFRNFVDSCLQKIP 255
Query: 649 SDRPSATELLQD-----ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDE 697
DRP++ LL+ PP + +L+ + D Y K+ +F E
Sbjct: 256 QDRPTSEVLLKHRFVLRERPPTVIMDLIQRTKDAVR-ELDNLQYRKMKKILFQE 308
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 188 bits (479), Expect = 2e-54
Identities = 74/318 (23%), Positives = 129/318 (40%), Gaps = 69/318 (21%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
D+E L +G G +G + K DG+ K++ + ++ EV L L+H +
Sbjct: 5 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 64
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+VRYY + +T LYI MEY
Sbjct: 65 IVRYYDRIIDR--------------------------------------TNTTLYIVMEY 86
Query: 476 CPRT-----LRQVFESYDHFDKELAWHLFRQIVEGLAHIH-----GQGIIHRDLTPNNIF 525
C + + + + D+E + Q+ L H G ++HRDL P N+F
Sbjct: 87 CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 146
Query: 526 FDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585
D + ++K+GDFGLA+ L + + VGT +Y +PE
Sbjct: 147 LDGKQNVKLGDFGLARILNHD---------------TSFAKAFVGTPYYMSPEQMNRMS- 190
Query: 586 IDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642
+EK+D++SLG + +EL PF+ ++++ + K P + E ++ R
Sbjct: 191 YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRYSD--ELNEIITR 248
Query: 643 LMSPSPSDRPSATELLQD 660
+++ RPS E+L++
Sbjct: 249 MLNLKDYHRPSVEEILEN 266
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 184 bits (468), Expect = 6e-53
Identities = 65/320 (20%), Positives = 112/320 (35%), Gaps = 67/320 (20%)
Query: 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL 408
R+L F+ +G G F V + A +++ + + R E L
Sbjct: 6 NDGRFL-KFDIE--IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEML 62
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
LQH ++VR+Y +W T
Sbjct: 63 KGLQHPNIVRFYDSWESTVKGK------------------------------------KC 86
Query: 469 LYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH--GQGIIHRDLTPNNIF 525
+ + E TL+ + + ++ RQI++GL +H IIHRDL +NIF
Sbjct: 87 IVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIF 146
Query: 526 FDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584
+KIGD GLA + +GT + APE+ +
Sbjct: 147 ITGPTGSVKIGDLGLATLKRASFA-----------------KAVIGTPEFMAPEMYEE-- 187
Query: 585 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLL 640
K DE D+Y+ G+ E+ +P+S + + G P S+ + + ++
Sbjct: 188 KYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVT-SGVKPASFDKVAIPEVKEII 246
Query: 641 RRLMSPSPSDRPSATELLQD 660
+ + +R S +LL
Sbjct: 247 EGCIRQNKDERYSIKDLLNH 266
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 182 bits (464), Expect = 5e-52
Identities = 61/316 (19%), Positives = 110/316 (34%), Gaps = 67/316 (21%)
Query: 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATL 408
P +Y + +G G G V + G+ A++++ L+ + P + I+ E+ +
Sbjct: 18 PKKKY----TRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ--PKKELIINEILVM 71
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
++ ++V Y ++
Sbjct: 72 RENKNPNIVNYLDSYLVGD----------------------------------------E 91
Query: 469 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
L++ MEY + D+ + R+ ++ L +H +IHRD+ +NI
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
+K+ DFG + EQ + + VGT ++ APE+
Sbjct: 152 DGSVKLTDFGFCAQITPEQSKR---------------STMVGTPYWMAPEVVTRKA-YGP 195
Query: 589 KADMYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLM 644
K D++SLGI+ E+ P+ + L + G K S L R +
Sbjct: 196 KVDIWSLGIMAIEMIEGEPPYLNENPLR-ALYLIATNGTPELQNPEKLSAIFRDFLNRCL 254
Query: 645 SPSPSDRPSATELLQD 660
R SA ELLQ
Sbjct: 255 DMDVEKRGSAKELLQH 270
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Score = 183 bits (465), Expect = 1e-51
Identities = 63/323 (19%), Positives = 125/323 (38%), Gaps = 67/323 (20%)
Query: 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 405
+ + L+ ++ + LG G FG V + G ++A K + +S + + +E+
Sbjct: 17 VEIKHDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDK--ETVRKEI 74
Query: 406 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
T+S L+H +V + A+ +
Sbjct: 75 QTMSVLRHPTLVNLHDAFEDDN-------------------------------------- 96
Query: 466 STYLYIQMEYCPRT--LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
+ + E+ +V + ++ ++ A RQ+ +GL H+H +H DL P N
Sbjct: 97 --EMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPEN 154
Query: 524 IFFDARND--IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581
I F + +K+ DFGL L +Q + GT + APE+ +
Sbjct: 155 IMFTTKRSNELKLIDFGLTAHLDPKQSVKV----------------TTGTAEFAAPEVAE 198
Query: 582 GWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-E 637
G P + DM+S+G++ + L PF + + + + + S + SE +
Sbjct: 199 GKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGK 257
Query: 638 SLLRRLMSPSPSDRPSATELLQD 660
+R+L+ P+ R + + L+
Sbjct: 258 DFIRKLLLADPNTRMTIHQALEH 280
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (458), Expect = 2e-51
Identities = 64/314 (20%), Positives = 111/314 (35%), Gaps = 66/314 (21%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
+E + LG G FG V +NK A K I K + + + E+ L+ H +
Sbjct: 13 FWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEEL--EDYMVEIDILASCDHPN 70
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
+V+ A++ L+I +E+
Sbjct: 71 IVKLLDAFYYEN----------------------------------------NLWILIEF 90
Query: 476 CPRTL--RQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
C + E + + +Q ++ L ++H IIHRDL NI F DIK
Sbjct: 91 CAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIK 150
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW----PKIDEK 589
+ DFG++ + +GT ++ APE+ D K
Sbjct: 151 LADFGVSAKNTRTIQRR---------------DSFIGTPYWMAPEVVMCETSKDRPYDYK 195
Query: 590 ADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646
AD++SLGI E+ P +++L K + S + L++ +
Sbjct: 196 ADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEK 255
Query: 647 SPSDRPSATELLQD 660
+ R + ++LLQ
Sbjct: 256 NVDARWTTSQLLQH 269
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 180 bits (458), Expect = 5e-51
Identities = 66/351 (18%), Positives = 125/351 (35%), Gaps = 105/351 (29%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+DFE++ LG G G V +K G A K I L+ K + ++I+RE+ L
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPA-IRNQIIRELQVLHECNSP 64
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V +Y A++ G + I ME
Sbjct: 65 YIVGFYGAFYSDG----------------------------------------EISICME 84
Query: 475 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH-GQGIIHRDLTPNNIFFDARNDI 532
+ +L QV + +++ + +++GL ++ I+HRD+ P+NI ++R +I
Sbjct: 85 HMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEI 144
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
K+ DFG++ L VGT Y +PE QG ++D+
Sbjct: 145 KLCDFGVSGQLIDSMA-----------------NSFVGTRSYMSPERLQGTH-YSVQSDI 186
Query: 593 YSLGIVFFELW---HPFSTAMERQIV---------------------------------- 615
+S+G+ E+ +P +++
Sbjct: 187 WSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRP 246
Query: 616 ------LSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ 659
L D P FS + + + + + +P++R +L+
Sbjct: 247 PMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 297
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Score = 179 bits (455), Expect = 1e-50
Identities = 60/348 (17%), Positives = 116/348 (33%), Gaps = 76/348 (21%)
Query: 346 MSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREV 405
+ P ++ +E+L +G G FG V +++ G+ A+KK+ ++++ LRE+
Sbjct: 1 VECPFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREI 60
Query: 406 ATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
L L+H++VV +
Sbjct: 61 KILQLLKHENVVNLIEICRTKASPYNRCKG------------------------------ 90
Query: 466 STYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNI 524
+Y+ ++C + F + + ++ GL +IH I+HRD+ N+
Sbjct: 91 --SIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANV 148
Query: 525 FFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584
+K+ DFGLA+ L + Q + T +V T +Y PE+ G
Sbjct: 149 LITRDGVLKLADFGLARAFSLAKNSQPNRY-----------TNRVVTLWYRPPELLLGER 197
Query: 585 KIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE---- 637
D++ G + E+W E+ + + G + P E
Sbjct: 198 DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEK 257
Query: 638 -------------------------SLLRRLMSPSPSDRPSATELLQD 660
L+ +L+ P+ R + + L
Sbjct: 258 LELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRIDSDDALNH 305
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 175 bits (445), Expect = 1e-49
Identities = 74/316 (23%), Positives = 115/316 (36%), Gaps = 62/316 (19%)
Query: 349 PSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVAT 407
P + DF+ + LG G F VVL + R YA+K + + + RE
Sbjct: 2 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDV 61
Query: 408 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 467
+SRL H V+ Y + +
Sbjct: 62 MSRLDHPFFVKLYFTFQDDE---------------------------------------- 81
Query: 468 YLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
LY + Y L + FD+ +IV L ++HG+GIIHRDL P NI
Sbjct: 82 KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILL 141
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586
+ I+I DFG AK L E A VGT Y +PE+
Sbjct: 142 NEDMHIQITDFGTAKVLSPESKQARA-------------NSFVGTAQYVSPELLTEKS-A 187
Query: 587 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL 643
+ +D+++LG + ++L PF E I +K + + P + F + L+ +L
Sbjct: 188 CKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKF---FPKARDLVEKL 244
Query: 644 MSPSPSDRPSATELLQ 659
+ + R E+
Sbjct: 245 LVLDATKRLGCEEMEG 260
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Score = 177 bits (449), Expect = 2e-49
Identities = 59/315 (18%), Positives = 116/315 (36%), Gaps = 67/315 (21%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ ++ L+ LG G FG V C K GR + K I + E++ +++L H
Sbjct: 28 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPL--DKYTVKNEISIMNQLHH 85
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++ + A+ + + + +
Sbjct: 86 PKLINLHDAFEDKY----------------------------------------EMVLIL 105
Query: 474 EYCP-RTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
E+ L + D+ + + RQ EGL H+H I+H D+ P NI + +
Sbjct: 106 EFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKA 165
Query: 532 --IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
+KI DFGLA L +++ + T + APEI P +
Sbjct: 166 SSVKIIDFGLATKLNPDEIVKV----------------TTATAEFAAPEIVDREP-VGFY 208
Query: 590 ADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMS 645
DM+++G++ + L PF+ + + + + + E + S + + ++ L+
Sbjct: 209 TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQ 268
Query: 646 PSPSDRPSATELLQD 660
P R + + L+
Sbjct: 269 KEPRKRLTVHDALEH 283
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 174 bits (442), Expect = 3e-49
Identities = 62/315 (19%), Positives = 107/315 (33%), Gaps = 67/315 (21%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
Q +G G FG V K AVK + + + EV L + +H
Sbjct: 8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHV 64
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+++ + + L I +
Sbjct: 65 NILLFMGYS-----------------------------------------TAPQLAIVTQ 83
Query: 475 YCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
+C +L + F+ + RQ +G+ ++H + IIHRDL NNIF +
Sbjct: 84 WCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTV 143
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK--IDEKA 590
KIGDFGLA S G+ + APE+ + K ++
Sbjct: 144 KIGDFGLATVK-------------SRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190
Query: 591 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP--PSWVAKFSEQ-ESLLRRLM 644
D+Y+ GIV +EL P+S R ++ + + P + + + L+ +
Sbjct: 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECL 250
Query: 645 SPSPSDRPSATELLQ 659
+RP ++L
Sbjct: 251 KKKRDERPLFPQILA 265
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 172 bits (438), Expect = 9e-49
Identities = 62/323 (19%), Positives = 113/323 (34%), Gaps = 74/323 (22%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-------VNDRILREVATL 408
++E + LG G V C +K + YAVK I + + + L+EV L
Sbjct: 4 NYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDIL 63
Query: 409 SRLQ-HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 467
++ H ++++ +ET T
Sbjct: 64 RKVSGHPNIIQLKD-TYETN---------------------------------------T 83
Query: 468 YLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
+ ++ + + L ++ + R ++E + +H I+HRDL P NI
Sbjct: 84 FFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILL 143
Query: 527 DARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--- 583
D +IK+ DFG + L + GT Y APEI +
Sbjct: 144 DDDMNIKLTDFGFSCQLDPGEKL----------------REVCGTPSYLAPEIIECSMND 187
Query: 584 --PKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-E 637
P ++ DM+S G++ + L PF + ++ + + +S+ +
Sbjct: 188 NHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVK 247
Query: 638 SLLRRLMSPSPSDRPSATELLQD 660
L+ R + P R +A E L
Sbjct: 248 DLVSRFLVVQPQKRYTAEEALAH 270
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 172 bits (437), Expect = 3e-48
Identities = 66/351 (18%), Positives = 130/351 (37%), Gaps = 69/351 (19%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ ++ LG G F V+L ++K + A+K I K + E+A L +++H
Sbjct: 9 DIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIA-KKALEGKEGSMENEIAVLHKIKHP 67
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
++V + G +LY+ M+
Sbjct: 68 NIVALDDIYESGG----------------------------------------HLYLIMQ 87
Query: 475 YCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 531
L + + A L Q+++ + ++H GI+HRDL P N+ + + ++
Sbjct: 88 LVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS 147
Query: 532 -IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
I I DFGL+K + + GT Y APE+ P +
Sbjct: 148 KIMISDFGLSKMEDPGSVL----------------STACGTPGYVAPEVLAQKP-YSKAV 190
Query: 591 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSP 646
D +S+G++ + L PF + ++ LK + E + S+ + +R LM
Sbjct: 191 DCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEK 250
Query: 647 SPSDRPSATELLQD---ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSI 694
P R + + LQ A ++ + ++ + + S + + ++
Sbjct: 251 DPEKRFTCEQALQHPWIAGDTALDKNIHQSVSEQIKKNFAKSKWKQAFNAT 301
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Score = 171 bits (435), Expect = 6e-48
Identities = 58/313 (18%), Positives = 109/313 (34%), Gaps = 68/313 (21%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQH 415
+ + LG G FG V C + Y K +++K + +E++ L+ +H++
Sbjct: 6 KYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTD---QVLVKKEISILNIARHRN 62
Query: 416 VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEY 475
++ ++++ L + E+
Sbjct: 63 ILHLHESFESME----------------------------------------ELVMIFEF 82
Query: 476 CP-RTLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND-- 531
+ + + S ++ Q+ E L +H I H D+ P NI + R
Sbjct: 83 ISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSST 142
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
IKI +FG A+ LK + Y APE+ Q + D
Sbjct: 143 IKIIEFGQARQLKPGD----------------NFRLLFTAPEYYAPEVHQHDV-VSTATD 185
Query: 592 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPS 647
M+SLG + + L +PF +QI+ + + + + S + + RL+
Sbjct: 186 MWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKE 245
Query: 648 PSDRPSATELLQD 660
R +A+E LQ
Sbjct: 246 RKSRMTASEALQH 258
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 169 bits (430), Expect = 8e-48
Identities = 70/314 (22%), Positives = 117/314 (37%), Gaps = 55/314 (17%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP-VNDRILREVATLSRLQH 413
+ +E + LG GG V L ++ R AVK +R P R RE + L H
Sbjct: 7 DRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNH 66
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+V Y + YI M
Sbjct: 67 PAIVAVYDTG------------------------------------EAETPAGPLPYIVM 90
Query: 474 EYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
EY TLR + + + A + + L H GIIHRD+ P NI A N +
Sbjct: 91 EYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAV 150
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
K+ DFG+A+ + D+G +GT Y +PE +G +D ++D+
Sbjct: 151 KVMDFGIARAIA------------DSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDV 197
Query: 593 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRRLMSPSP 648
YSLG V +E+ PF+ + +++ P + S ++++ + ++ +P
Sbjct: 198 YSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNP 257
Query: 649 SDRPSATELLQDAL 662
+R ++ L
Sbjct: 258 ENRYQTAAEMRADL 271
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 164 bits (416), Expect = 4e-46
Identities = 50/312 (16%), Positives = 106/312 (33%), Gaps = 67/312 (21%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
D L+ LG G FG V K + A+K I+ S D + E + L H+
Sbjct: 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHE 59
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+V+ Y + ++I E
Sbjct: 60 KLVQLYGVCTKQR----------------------------------------PIFIITE 79
Query: 475 YCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
Y L + E F + + + + E + ++ + +HRDL N + + +
Sbjct: 80 YMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVV 139
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
K+ DFGL++++ ++ G ++ PE+ K K+D+
Sbjct: 140 KVSDFGLSRYVLDDEYTSS--------------VGSKFPVRWSPPEVLMY-SKFSSKSDI 184
Query: 593 YSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
++ G++ +E++ P+ + + P ++ + +++
Sbjct: 185 WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLASE--KVYTIMYSCWHEKA 242
Query: 649 SDRPSATELLQD 660
+RP+ LL +
Sbjct: 243 DERPTFKILLSN 254
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (419), Expect = 5e-46
Identities = 70/319 (21%), Positives = 117/319 (36%), Gaps = 70/319 (21%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK----DKSLPVNDRILREVATLSR 410
+ ++ + LG G F V C+ K G YA K I+ + + + I REV+ L
Sbjct: 10 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKE 69
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
+QH +V+ ++ + T +
Sbjct: 70 IQHPNVITLHEVY----------------------------------------ENKTDVI 89
Query: 471 IQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
+ +E L + +E A +QI+ G+ ++H I H DL P NI R
Sbjct: 90 LILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 530 ND----IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585
N IKI DFGLA + GT + APEI P
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEF----------------KNIFGTPEFVAPEIVNYEP- 192
Query: 586 IDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLR 641
+ +ADM+S+G++ + L PF +++ + + E + + S + +R
Sbjct: 193 LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIR 252
Query: 642 RLMSPSPSDRPSATELLQD 660
RL+ P R + + LQ
Sbjct: 253 RLLVKDPKKRMTIQDSLQH 271
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Score = 165 bits (419), Expect = 8e-46
Identities = 79/358 (22%), Positives = 129/358 (36%), Gaps = 68/358 (18%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSR-L 411
+ DF + LG G FG V L + K + +A+K ++ + + + + E LS
Sbjct: 1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAW 60
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
+H + + + L+
Sbjct: 61 EHPFLTHMFCTFQTKE----------------------------------------NLFF 80
Query: 472 QMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
MEY L +S FD A +I+ GL +H +GI++RDL +NI D
Sbjct: 81 VMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDG 140
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
IKI DFG+ K L GT Y APEI G +
Sbjct: 141 HIKIADFGMCKENMLGDAKT---------------NTFCGTPDYIAPEILLGQK-YNHSV 184
Query: 591 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647
D +S G++ +E+ PF E ++ ++ P W+ K E + LL +L
Sbjct: 185 DWWSFGVLLYEMLIGQSPFHGQDEEEL-FHSIRMDNPFYPRWLEK--EAKDLLVKLFVRE 241
Query: 648 PSDRPSAT-ELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLDMKH 704
P R ++ Q L ++ +E L+ + + + S FD+E L+ K
Sbjct: 242 PEKRLGVRGDIRQHPLFREINWEELER--KEIDPPFRPKVKSPFDCSNFDKEFLNEKP 297
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (413), Expect = 1e-45
Identities = 61/313 (19%), Positives = 107/313 (34%), Gaps = 73/313 (23%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ + + LQ +G G FG V+L + G AVK I+ + L E + +++L+H
Sbjct: 6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDATA----QAFLAEASVMTQLRH 59
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V+ E E LYI
Sbjct: 60 SNLVQLLGVIVE---------------------------------------EKGGLYIVT 80
Query: 474 EYCPR-TLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
EY + +L S + + E + ++ G +HRDL N+ N
Sbjct: 81 EYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDN 140
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
K+ DFGL K S +TAPE + K K+
Sbjct: 141 VAKVSDFGLTKEA------------------SSTQDTGKLPVKWTAPEALREK-KFSTKS 181
Query: 591 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646
D++S GI+ +E++ P+ + +V +KG + +++
Sbjct: 182 DVWSFGILLWEIYSFGRVPYPRIPLKDVV--PRVEKGYKMDAPDGCPPAVYEVMKNCWHL 239
Query: 647 SPSDRPSATELLQ 659
+ RPS +L +
Sbjct: 240 DAAMRPSFLQLRE 252
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 163 bits (413), Expect = 2e-45
Identities = 71/333 (21%), Positives = 115/333 (34%), Gaps = 83/333 (24%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRL----KDKSLPVNDRILREVATLSR 410
+ ++ LG GGFG V D A+K + LP R+ EV L +
Sbjct: 4 SQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKK 63
Query: 411 LQHQH--VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
+ V+R +
Sbjct: 64 VSSGFSGVIRLLDWFERPD----------------------------------------S 83
Query: 469 LYIQMEYCP--RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF 526
+ +E + L +ELA F Q++E + H H G++HRD+ NI
Sbjct: 84 FVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI 143
Query: 527 DA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585
D R ++K+ DFG LK T GT Y+ PE +
Sbjct: 144 DLNRGELKLIDFGSGALLKDTVY-----------------TDFDGTRVYSPPEWIRYHRY 186
Query: 586 IDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRR 642
A ++SLGI+ +++ PF + +I+ + + + E + L+R
Sbjct: 187 HGRSAAVWSLGILLYDMVCGDIPFEH--DEEIIRGQVFFRQRVSS-------ECQHLIRW 237
Query: 643 LMSPSPSDRPSATELL-----QDALPPQMEYEL 670
++ PSDRP+ E+ QD L PQ E+
Sbjct: 238 CLALRPSDRPTFEEIQNHPWMQDVLLPQETAEI 270
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 161 bits (407), Expect = 2e-44
Identities = 59/332 (17%), Positives = 111/332 (33%), Gaps = 73/332 (21%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHY---AVKKIRLKDKSLPVNDRILREVATLSR 410
++ + Q +G G FG V KL G+ A+K ++ + L E + + +
Sbjct: 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLK-SGYTEKQRRDFLSEASIMGQ 83
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
H +V+ + ST +
Sbjct: 84 FDHPNVIHLEGVVTK----------------------------------------STPVM 103
Query: 471 IQMEYCPRTLRQVF--ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
I E+ F ++ F + R I G+ ++ +HRDL NI ++
Sbjct: 104 IITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS 163
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
K+ DFGL++FL+ + G +TAPE Q K
Sbjct: 164 NLVCKVSDFGLSRFLE----------DDTSDPTYTSALGGKIPIRWTAPEAIQYR-KFTS 212
Query: 589 KADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644
+D++S GIV +E+ P+ + ++ + ++ P + S L+
Sbjct: 213 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVI--NAIEQDYRLPPPMDCPSALHQLMLDCW 270
Query: 645 SPSPSDRPSATELLQDALPPQMEYELLDNILR 676
+ RP +++ LD ++R
Sbjct: 271 QKDRNHRPKFGQIVNT----------LDKMIR 292
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (407), Expect = 2e-44
Identities = 63/335 (18%), Positives = 106/335 (31%), Gaps = 87/335 (25%)
Query: 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLP---VNDRILREVATLSRLQHQ 414
E+L LG G F V ++K + A+KKI+L +S +N LRE+ L L H
Sbjct: 1 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 60
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+++ A+ + + +
Sbjct: 61 NIIGLLDAFGHKS----------------------------------------NISLVFD 80
Query: 475 YCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
+ + ++ ++GL ++H I+HRDL PNN+ D +K
Sbjct: 81 FMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLK 140
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
+ DFGLAK T QV T +Y APE+ G DM+
Sbjct: 141 LADFGLAKSFGSPNRAY---------------THQVVTRWYRAPELLFGARMYGVGVDMW 185
Query: 594 SLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE------------- 637
++G + EL + + + G
Sbjct: 186 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPL 245
Query: 638 ------------SLLRRLMSPSPSDRPSATELLQD 660
L++ L +P R +AT+ L+
Sbjct: 246 HHIFSAAGDDLLDLIQGLFLFNPCARITATQALKM 280
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 161 bits (408), Expect = 3e-44
Identities = 75/382 (19%), Positives = 131/382 (34%), Gaps = 84/382 (21%)
Query: 346 MSLPSSRYLNDFEEL-QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILRE 404
+ + + ++D++ Q LG G G V+ NK +A+K ++ + RE
Sbjct: 2 LQIKKNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCP-------KARRE 54
Query: 405 VATLSRL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENK 463
V R Q H+VR + +
Sbjct: 55 VELHWRASQCPHIVRIVDVY------------------------------------ENLY 78
Query: 464 LESTYLYIQMEYCP-RTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLT 520
L I ME L + F + A + + I E + ++H I HRD+
Sbjct: 79 AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVK 138
Query: 521 PNNIFFDARND---IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAP 577
P N+ + ++ +K+ DFG AK + T +Y AP
Sbjct: 139 PENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCY----------------TPYYVAP 182
Query: 578 EIEQGWPKIDEKADMYSLGIVFFELW---HPF----STAMERQIVLSDLKQKGELPPSWV 630
E+ D+ DM+SLG++ + L PF A+ + + E P
Sbjct: 183 EVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEW 241
Query: 631 AKFSEQ-ESLLRRLMSPSPSDRPSATELL------QDALPPQMEYELLDNILRMMHSSED 683
++ SE+ + L+R L+ P+ R + TE + Q PQ + ED
Sbjct: 242 SEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPLHTSRVLKEDKERWED 301
Query: 684 T--SIYDKVVSSIFDEETLDMK 703
+ + + D E + +K
Sbjct: 302 VKEEMTSALATMRVDYEQIKIK 323
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Score = 161 bits (409), Expect = 6e-44
Identities = 70/364 (19%), Positives = 119/364 (32%), Gaps = 79/364 (21%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVND----RILREVATLS 409
+NDF + +G GGFG V C+ G+ YA+K + K + + ++ +S
Sbjct: 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVS 62
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+V A+ L
Sbjct: 63 TGDCPFIVCMSYAFHTPD----------------------------------------KL 82
Query: 470 YIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
++ L + F + +I+ GL H+H + +++RDL P NI D
Sbjct: 83 SFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDE 142
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
++I D GLA ++ VGT+ Y APE+ Q D
Sbjct: 143 HGHVRISDLGLACDFSKKKP-----------------HASVGTHGYMAPEVLQKGVAYDS 185
Query: 589 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645
AD +SLG + F+L PF + D + E SLL L+
Sbjct: 186 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQ 245
Query: 646 PSPSDRPS-----ATELLQDALPPQMEYELLDN------ILRMMHSSEDTSIYDKVVSSI 694
+ R A E+ + ++++++ ++ +D
Sbjct: 246 RDVNRRLGCLGRGAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFD---IGS 302
Query: 695 FDEE 698
FDEE
Sbjct: 303 FDEE 306
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (401), Expect = 7e-44
Identities = 69/312 (22%), Positives = 101/312 (32%), Gaps = 69/312 (22%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ ++ LG G FG V + AVK ++ S D L E + +LQHQ
Sbjct: 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSMS---PDAFLAEANLMKQLQHQ 68
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+VR Y + +YI E
Sbjct: 69 RLVRLYAVVTQEP-----------------------------------------IYIITE 87
Query: 475 YCPRTLRQVF---ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
Y F S + QI EG+A I + IHRDL NI
Sbjct: 88 YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
KI DFGLA+ ++ + G +TAPE K+D
Sbjct: 148 CKIADFGLARLIEDNEYTAR--------------EGAKFPIKWTAPEAINYGT-FTIKSD 192
Query: 592 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPS 647
++S GI+ E+ M V+ +L++ + P + E L+R
Sbjct: 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCPE--ELYQLMRLCWKER 250
Query: 648 PSDRPSATELLQ 659
P DRP+ L
Sbjct: 251 PEDRPTFDYLRS 262
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 159 bits (403), Expect = 7e-44
Identities = 53/314 (16%), Positives = 104/314 (33%), Gaps = 41/314 (13%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLS 409
N+ E ++ +G G FG V + AVK ++ ++ S + RE A ++
Sbjct: 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLK-EEASADMQADFQREAALMA 71
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
+ ++V+ + M G L S T
Sbjct: 72 EFDNPNIVKLLGVCAVGKPMCLLFEYMAY-GDLNEFLRSMS--------------PHTVC 116
Query: 470 YIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
+ R + RQ+ G+A++ + +HRDL N
Sbjct: 117 SLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN 176
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
+KI DFGL++ + + + PE +
Sbjct: 177 MVVKIADFGLSRNI-------------YSADYYKADGNDAIPIRWMPPESIFYNR-YTTE 222
Query: 590 ADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645
+D+++ G+V +E++ P+ +++ + G + E +L+R S
Sbjct: 223 SDVWAYGVVLWEIFSYGLQPYYGMAHEEVI--YYVRDGNILACPENCPLELYNLMRLCWS 280
Query: 646 PSPSDRPSATELLQ 659
P+DRPS + +
Sbjct: 281 KLPADRPSFCSIHR 294
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Score = 157 bits (399), Expect = 9e-44
Identities = 56/311 (18%), Positives = 104/311 (33%), Gaps = 67/311 (21%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
++ +Q +G G FG V L + A+K IR + + + E + +L H
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIR---EGAMSEEDFIEEAEVMMKLSHP 60
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+V+ Y E + + E
Sbjct: 61 KLVQLYGVCLEQA----------------------------------------PICLVFE 80
Query: 475 YCPR-TLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
+ L + F E + + EG+A++ +IHRDL N I
Sbjct: 81 FMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVI 140
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
K+ DFG+ +F+ +Q TG + +PE+ + K+D+
Sbjct: 141 KVSDFGMTRFVLDDQYTSS--------------TGTKFPVKWASPEVFSFS-RYSSKSDV 185
Query: 593 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSP 648
+S G++ +E++ V+ D+ L P + ++ P
Sbjct: 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAST--HVYQIMNHCWKERP 243
Query: 649 SDRPSATELLQ 659
DRP+ + LL+
Sbjct: 244 EDRPAFSRLLR 254
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (402), Expect = 1e-43
Identities = 71/359 (19%), Positives = 124/359 (34%), Gaps = 74/359 (20%)
Query: 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVK---KIRLKDKSLPVNDRILREVATLSRLQ 412
+F++++ LG G FG V +G + K + S N IL E ++ +
Sbjct: 10 EFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVD 69
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
+ HV R + + +
Sbjct: 70 NPHVCRLLGICLTST-----------------------------------------VQLI 88
Query: 473 MEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
+ P L V E D+ + + QI +G+ ++ + ++HRDL N+
Sbjct: 89 TQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQ 148
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
+KI DFGLAK L E+ + A G + A E ++
Sbjct: 149 HVKITDFGLAKLLGAEEKEYHA-------------EGGKVPIKWMALESILHRI-YTHQS 194
Query: 591 DMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSP 646
D++S G+ +EL P+ +I + +KGE P + ++ +
Sbjct: 195 DVWSYGVTVWELMTFGSKPYDGIPASEIS--SILEKGERLPQPPICTIDVYMIMVKCWMI 252
Query: 647 SPSDRPSATELLQD----ALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEETLD 701
RP EL+ + A PQ Y ++ RM S S + ++ DEE +D
Sbjct: 253 DADSRPKFRELIIEFSKMARDPQ-RYLVIQGDERMHLPSPTDSNFY---RALMDEEDMD 307
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 158 bits (400), Expect = 1e-43
Identities = 73/338 (21%), Positives = 122/338 (36%), Gaps = 86/338 (25%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ +F++++ +G G +G V +NKL G A+KKIRL ++ V +RE++ L L H
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V+ LY+
Sbjct: 61 PNIVKLLDVIHTEN----------------------------------------KLYLVF 80
Query: 474 EYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
E+ + L++ ++ L Q+++GLA H ++HRDL P N+ +
Sbjct: 81 EFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGA 140
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
IK+ DFGLA+ + T +V T +Y APEI G D
Sbjct: 141 IKLADFGLARAFGVPVRTY---------------THEVVTLWYRAPEILLGCKYYSTAVD 185
Query: 592 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELP-----------------PSWVA 631
++SLG +F E+ F E + + G P W
Sbjct: 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWAR 245
Query: 632 KF---------SEQESLLRRLMSPSPSDRPSATELLQD 660
+ + SLL +++ P+ R SA L
Sbjct: 246 QDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Score = 159 bits (404), Expect = 2e-43
Identities = 67/359 (18%), Positives = 115/359 (32%), Gaps = 91/359 (25%)
Query: 336 KPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL 395
K + +P P + + + +G+G FG V K G A+KK+ +
Sbjct: 2 KVTTVVATPGQG-PDRPQEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR-- 58
Query: 396 PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSA 455
RE+ + +L H ++VR ++ +G
Sbjct: 59 ----FKNRELQIMRKLDHCNIVRLRYFFYSSG---------------------------- 86
Query: 456 DVTGQENKLESTYLYIQMEYCP----RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511
K + YL + ++Y P R R + Q+ LA+IH
Sbjct: 87 ------EKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS 140
Query: 512 QGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570
GI HRD+ P N+ D +K+ DFG AK L + + +
Sbjct: 141 FGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVS----------------YIC 184
Query: 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPP 627
+ +Y APE+ G D++S G V EL F ++ +K G
Sbjct: 185 SRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR 244
Query: 628 SWVAKFSEQE--------------------------SLLRRLMSPSPSDRPSATELLQD 660
+ + + +L RL+ +P+ R + E
Sbjct: 245 EQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAH 303
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (396), Expect = 3e-43
Identities = 55/304 (18%), Positives = 104/304 (34%), Gaps = 63/304 (20%)
Query: 363 LGHGGFGHVVLC--KNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 420
LG G FG V + K + AVK ++ + + D +L E + +L + ++VR
Sbjct: 15 LGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMI 74
Query: 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 479
G+ + + + ME
Sbjct: 75 ------GICEAES-----------------------------------WMLVMEMAELGP 93
Query: 480 LRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGL 539
L + + H + L Q+ G+ ++ +HRDL N+ ++ KI DFGL
Sbjct: 94 LNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGL 153
Query: 540 AKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVF 599
+K L+ ++ A T + APE + K+D++S G++
Sbjct: 154 SKALRADENYYKA------------QTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLM 200
Query: 600 FELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT 655
+E + P+ ++ + +KGE E L+ + +RP
Sbjct: 201 WEAFSYGQKPYRGMKGSEVT--AMLEKGERMGCPAGCPREMYDLMNLCWTYDVENRPGFA 258
Query: 656 ELLQ 659
+
Sbjct: 259 AVEL 262
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 157 bits (397), Expect = 7e-43
Identities = 78/366 (21%), Positives = 135/366 (36%), Gaps = 84/366 (22%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKD-KSLPVNDRILREVATLSRLQ 412
L DF+ L+ LG G FG V L +++ +GR+YA+K ++ + L + E LS +
Sbjct: 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVT 62
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H ++R + + + +++
Sbjct: 63 HPFIIRMWGTFQDAQ----------------------------------------QIFMI 82
Query: 473 MEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
M+Y L + F +A ++ L ++H + II+RDL P NI D
Sbjct: 83 MDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH 142
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
IKI DFG AK++ GT Y APE+ P ++ D
Sbjct: 143 IKITDFGFAKYVPDVT------------------YTLCGTPDYIAPEVVSTKP-YNKSID 183
Query: 592 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
+S GI+ +E+ PF + + L + PP + + LL RL++
Sbjct: 184 WWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPPFFNEDVKD---LLSRLITRDL 240
Query: 649 SDR-----PSATELLQDALPPQMEYELLDN-------ILRMMHSSEDTSIYDKVVSSIFD 696
S R ++ ++ +E L + + DTS +DK +
Sbjct: 241 SQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQFDK-----YP 295
Query: 697 EETLDM 702
EE ++
Sbjct: 296 EEDINY 301
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 156 bits (395), Expect = 9e-43
Identities = 61/350 (17%), Positives = 110/350 (31%), Gaps = 56/350 (16%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRL- 411
ND + +G G FG V+ + K DG R+K+ + + E+ L +L
Sbjct: 9 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLG 68
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H +++ A G + L
Sbjct: 69 HHPNIINLLGACEHRGYLYLAIEYAPHG-----------------------NLLDFLRKS 105
Query: 472 QMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
++ + + H + G+ ++ + IHRDL NI
Sbjct: 106 RVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYV 165
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
KI DFGL++ + V V T + A E +D
Sbjct: 166 AKIADFGLSRGQE----------------VYVKKTMGRLPVRWMAIESLNYSV-YTTNSD 208
Query: 592 MYSLGIVFFEL---WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
++S G++ +E+ M + L Q G + E L+R+ P
Sbjct: 209 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ-GYRLEKPLNCDDEVYDLMRQCWREKP 267
Query: 649 SDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYDKVVSSIFDEE 698
+RPS ++L L+ +L + +T++Y+K + D
Sbjct: 268 YERPSFAQILVS----------LNRMLEERKTYVNTTLYEKFTYAGIDCS 307
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Score = 155 bits (392), Expect = 1e-42
Identities = 62/337 (18%), Positives = 123/337 (36%), Gaps = 86/337 (25%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ + L+ +G G +G V +N G +A+KKIRL+ + + +RE++ L L+H
Sbjct: 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKH 59
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V+ Y L +
Sbjct: 60 SNIVKLYDVIHT----------------------------------------KKRLVLVF 79
Query: 474 EYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
E+ + L+++ + + + A Q++ G+A+ H + ++HRDL P N+ + ++
Sbjct: 80 EHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGEL 139
Query: 533 KIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592
KI DFGLA+ + ++ T +Y AP++ G K D+
Sbjct: 140 KIADFGLARAFGIPVRKYT---------------HEIVTLWYRAPDVLMGSKKYSTTIDI 184
Query: 593 YSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQE------------ 637
+S+G +F E+ F E ++ + G +E
Sbjct: 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPL 244
Query: 638 --------------SLLRRLMSPSPSDRPSATELLQD 660
LL +++ P+ R +A + L+
Sbjct: 245 PWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEH 281
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (390), Expect = 2e-42
Identities = 61/316 (19%), Positives = 108/316 (34%), Gaps = 65/316 (20%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLP-VNDRILREVATLS 409
D L+ LG G FG V + AVK ++ S P D +REV +
Sbjct: 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMH 66
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
L H++++R Y + +
Sbjct: 67 SLDHRNLIRLYGVV-----------------------------------------LTPPM 85
Query: 470 YIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
+ E P L ++ + HF Q+ EG+ ++ + IHRDL N+
Sbjct: 86 KMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLA 145
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
R+ +KIGDFGL + L V + + + APE +
Sbjct: 146 TRDLVKIGDFGLMRALP------------QNDDHYVMQEHRKVPFAWCAPESLKTRT-FS 192
Query: 588 EKADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRL 643
+D + G+ +E+ P+ + +L + ++GE P + +++ +
Sbjct: 193 HASDTWMFGVTLWEMFTYGQEPWI-GLNGSQILHKIDKEGERLPRPEDCPQDIYNVMVQC 251
Query: 644 MSPSPSDRPSATELLQ 659
+ P DRP+ L
Sbjct: 252 WAHKPEDRPTFVALRD 267
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 154 bits (390), Expect = 3e-42
Identities = 67/346 (19%), Positives = 110/346 (31%), Gaps = 75/346 (21%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
N + + +G G FG + L + G A+K +K K + ++ E +Q
Sbjct: 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK----HPQLHIESKIYKMMQGG 62
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+ + G Y + ME
Sbjct: 63 VGIPTIRWCGAEG---------------------------------------DYNVMVME 83
Query: 475 YCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFF---DARN 530
+L +F F + L Q++ + +IH + IHRD+ P+N N
Sbjct: 84 LLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGN 143
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
+ I DFGLAK + + Q + + GT Y + G +
Sbjct: 144 LVYIIDFGLAKKYRDARTHQHIPYRENKNL--------TGTARYASINTHLGIE-QSRRD 194
Query: 591 DMYSLGIVFFEL------WHPFSTAMERQIVLSDLKQKGELPPSWVAKF--SEQESLLRR 642
D+ SLG V W A +RQ ++K P + K SE + L
Sbjct: 195 DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNF 254
Query: 643 LMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYD 688
S D+P + L +L N+ S D ++D
Sbjct: 255 CRSLRFDDKPDYSYL----------RQLFRNLFHRQGFSYD-YVFD 289
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 155 bits (393), Expect = 4e-42
Identities = 60/335 (17%), Positives = 109/335 (32%), Gaps = 80/335 (23%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ L +G G +G V + ++ A+KKI + R LRE+ L R +H+++
Sbjct: 10 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKIS-PFEHQTYCQRTLREIKILLRFRHENI 68
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ + +Y+
Sbjct: 69 IGINDIIRAPTIEQMK-----------------------------------DVYLVTHLM 93
Query: 477 PRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGD 536
L ++ ++ H + + QI+ GL +IH ++HRDL P+N+ + D+KI D
Sbjct: 94 GADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICD 152
Query: 537 FGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLG 596
FGLA+ + T V T +Y APEI + D++S+G
Sbjct: 153 FGLARVADPDHDHTGF------------LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVG 200
Query: 597 IVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKF-------------------- 633
+ E+ F + L G +
Sbjct: 201 CILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPW 260
Query: 634 --------SEQESLLRRLMSPSPSDRPSATELLQD 660
S+ LL ++++ +P R + L
Sbjct: 261 NRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 295
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (389), Expect = 1e-41
Identities = 57/316 (18%), Positives = 113/316 (35%), Gaps = 44/316 (13%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGR-----HYAVKKIRLKDKSLPVNDRILREVATLS 409
+ E + LG G FG V+ + AVK ++ + + ++ E+ ++
Sbjct: 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLK-EKADSSEREALMSELKMMT 95
Query: 410 RL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
+L H+++V A +G + G L + S R S D
Sbjct: 96 QLGSHENIVNLLGACTLSGPIYLIFEYCCY-GDLLNYLRSKREKFSED------------ 142
Query: 469 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
++EY + + E + E Q+ +G+ + + +HRDL N+
Sbjct: 143 ---EIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTH 199
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
+KI DFGLA+ + + V + APE
Sbjct: 200 GKVVKICDFGLARDI-------------MSDSNYVVRGNARLPVKWMAPESLFEGI-YTI 245
Query: 589 KADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRL 643
K+D++S GI+ +E++ +P+ ++ ++ P + + E +++
Sbjct: 246 KSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYATE--EIYIIMQSC 303
Query: 644 MSPSPSDRPSATELLQ 659
+ RPS L
Sbjct: 304 WAFDSRKRPSFPNLTS 319
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 152 bits (386), Expect = 1e-41
Identities = 61/333 (18%), Positives = 110/333 (33%), Gaps = 69/333 (20%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
D LG G +G V K AVK ++ + + L+E A + ++H
Sbjct: 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV---EEFLKEAAVMKEIKH 72
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
++V+ YI
Sbjct: 73 PNLVQLLGVCTREP----------------------------------------PFYIIT 92
Query: 474 EYCPRTLRQVF---ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN 530
E+ + + + ++ QI + ++ + IHRDL N +
Sbjct: 93 EFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENH 152
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
+K+ DFGL++ + TG G +TAPE K K+
Sbjct: 153 LVKVADFGLSRLM--------------TGDTYTAHAGAKFPIKWTAPESLAYN-KFSIKS 197
Query: 591 DMYSLGIVFFELW---HPFSTAMERQIVLSDLKQ--KGELPPSWVAKFSEQESLLRRLMS 645
D+++ G++ +E+ ++ V L++ + E P K E L+R
Sbjct: 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCPEKVYE---LMRACWQ 254
Query: 646 PSPSDRPSATELLQDALPPQMEYELLDNILRMM 678
+PSDRPS E+ Q E + D + + +
Sbjct: 255 WNPSDRPSFAEIHQAFETMFQESSISDEVEKEL 287
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (389), Expect = 1e-41
Identities = 69/316 (21%), Positives = 110/316 (34%), Gaps = 69/316 (21%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVN-DRILREVATLSRLQ 412
+NDF+ L+ LG G FG V+L + K GR+YA+K +R + + E L +
Sbjct: 4 MNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTR 63
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
H + A+ L
Sbjct: 64 HPFLTALKYAFQTHD----------------------------------------RLCFV 83
Query: 473 MEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
MEY L F +E A +IV L ++H + +++RD+ N+ D
Sbjct: 84 MEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH 143
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
IKI DFGL K + GT Y APE+ + D
Sbjct: 144 IKITDFGLCKEGISDGATMK---------------TFCGTPEYLAPEVLEDND-YGRAVD 187
Query: 592 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
+ LG+V +E+ PF ++ L ++ P + + +SLL L+ P
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFPRTLSPEA---KSLLAGLLKKDP 244
Query: 649 SDRPS-----ATELLQ 659
R A E+++
Sbjct: 245 KQRLGGGPSDAKEVME 260
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Score = 154 bits (390), Expect = 1e-41
Identities = 71/337 (21%), Positives = 124/337 (36%), Gaps = 84/337 (24%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
+ +LQP+G G +G V + G A+KK+ +S R RE+ L ++H+
Sbjct: 18 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 77
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+V+ + E + T Y+ M
Sbjct: 78 NVIGLLDVFTP----------------------------------DETLDDFTDFYLVMP 103
Query: 475 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
+ L ++ + ++ ++ L Q+++GL +IH GIIHRDL P N+ + ++KI
Sbjct: 104 FMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKI 162
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594
DFGLA+ E TG V T +Y APE+ W + + D++S
Sbjct: 163 LDFGLARQADSEM------------------TGYVVTRWYRAPEVILNWMRYTQTVDIWS 204
Query: 595 LGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES------------- 638
+G + E+ F + + +K G P +V + E+
Sbjct: 205 VGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKK 264
Query: 639 ---------------LLRRLMSPSPSDRPSATELLQD 660
LL +++ R +A E L
Sbjct: 265 DFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 301
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (385), Expect = 1e-41
Identities = 69/346 (19%), Positives = 117/346 (33%), Gaps = 89/346 (25%)
Query: 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH 413
+ +E+L+ +G G +G V KN+ A+K++RL D V LRE+ L L+H
Sbjct: 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH 60
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+++VR + + +
Sbjct: 61 KNIVRLHDVLHS---------------------------------------DKKLTLVFE 81
Query: 474 EYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIK 533
+ D E+ Q+++GL H + ++HRDL P N+ + ++K
Sbjct: 82 FCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELK 141
Query: 534 IGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593
+ +FGLA+ + + +V T +Y P++ G DM+
Sbjct: 142 LANFGLARAFGIPVRCY---------------SAEVVTLWYRPPDVLFGAKLYSTSIDMW 186
Query: 594 SLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPS---------------------- 628
S G +F EL P + L + + P
Sbjct: 187 SAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATT 246
Query: 629 ----WVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQ-----DALPP 664
V K + LL+ L+ +P R SA E LQ D PP
Sbjct: 247 SLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFCPP 292
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 152 bits (384), Expect = 1e-41
Identities = 59/311 (18%), Positives = 98/311 (31%), Gaps = 67/311 (21%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
LG G FG V + A+K ++ S + L+E + +L+H+
Sbjct: 17 ESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTMS---PEAFLQEAQVMKKLRHE 72
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+V+ Y +YI E
Sbjct: 73 KLVQLYAVV-----------------------------------------SEEPIYIVTE 91
Query: 475 YCPR---TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARND 531
Y + E+ + + QI G+A++ +HRDL NI
Sbjct: 92 YMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLV 151
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
K+ DFGLA+ ++ + G +TAPE + K+D
Sbjct: 152 CKVADFGLARLIEDNEYTAR--------------QGAKFPIKWTAPEAALYG-RFTIKSD 196
Query: 592 MYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648
++S GI+ EL M + VL D ++G P L+ + P
Sbjct: 197 VWSFGILLTELTTKGRVPYPGMVNREVL-DQVERGYRMPCPPECPESLHDLMCQCWRKEP 255
Query: 649 SDRPSATELLQ 659
+RP+ L
Sbjct: 256 EERPTFEYLQA 266
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (379), Expect = 7e-41
Identities = 50/305 (16%), Positives = 94/305 (30%), Gaps = 65/305 (21%)
Query: 363 LGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYY 420
LG G FG V ++ A+K ++ + + ++RE + +L + ++VR
Sbjct: 17 LGCGNFGSVRQGVYRMRKKQIDVAIKVLK-QGTEKADTEEMMREAQIMHQLDNPYIVRLI 75
Query: 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-T 479
++ L + ME
Sbjct: 76 GVC-----------------------------------------QAEALMLVMEMAGGGP 94
Query: 480 LRQV-FESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFG 538
L + + L Q+ G+ ++ + +HRDL N+ R+ KI DFG
Sbjct: 95 LHKFLVGKREEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG 154
Query: 539 LAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIV 598
L+K L + + APE ++D++S G+
Sbjct: 155 LSKAL------------GADDSYYTARSAGKWPLKWYAPECINFRK-FSSRSDVWSYGVT 201
Query: 599 FFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654
+E P+ +++ + K P E +L+ DRP
Sbjct: 202 MWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECPP--ELYALMSDCWIYKWEDRPDF 259
Query: 655 TELLQ 659
+ Q
Sbjct: 260 LTVEQ 264
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Score = 150 bits (380), Expect = 1e-40
Identities = 58/332 (17%), Positives = 110/332 (33%), Gaps = 65/332 (19%)
Query: 337 PSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHV---VLCKNKLDGRHYAVKKIRLKDK 393
P + ++ + S + F E+ +G G FG V L N H AVK + +
Sbjct: 11 PELVQAVQHVVIGPSSLIVHFNEV--IGRGHFGCVYHGTLLDNDGKKIHCAVKSLN-RIT 67
Query: 394 SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAAS 453
+ + L E + H +V+ +
Sbjct: 68 DIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS--------------------------- 100
Query: 454 SADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAW--HLFRQIVEGLAHIHG 511
+ + Y + F + + + Q+ +G+ +
Sbjct: 101 ------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLAS 148
Query: 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
+ +HRDL N D + +K+ DFGLA+ + ++ D + TG
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-----------VHNKTGAKLP 197
Query: 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPP 627
+ A E Q K+D++S G++ +EL P+ I + L+ + L P
Sbjct: 198 VKWMALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP 256
Query: 628 SWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659
+ ++ + P RPS +EL+
Sbjct: 257 EYCPD--PLYEVMLKCWHPKAEMRPSFSELVS 286
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 149 bits (377), Expect = 3e-40
Identities = 67/322 (20%), Positives = 120/322 (37%), Gaps = 69/322 (21%)
Query: 354 LNDFEELQPLGHGGFGHVVLCK---NKLDGRHYAVKKIRLKD--KSLPVNDRILREVATL 408
+ +FE L+ LG G +G V L + G+ YA+K ++ + + E L
Sbjct: 23 IENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVL 82
Query: 409 SRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
++ + F+T T
Sbjct: 83 EHIRQSPFLVTLHYAFQTE---------------------------------------TK 103
Query: 469 LYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFD 527
L++ ++Y L + F + +IV L H+H GII+RD+ NI D
Sbjct: 104 LHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD 163
Query: 528 ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK-I 586
+ + + DFGL+K ++ ++ F GT Y AP+I +G
Sbjct: 164 SNGHVVLTDFGLSKEFVADETERAYDFC--------------GTIEYMAPDIVRGGDSGH 209
Query: 587 DEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQ-ESLLRR 642
D+ D +SLG++ +EL PF+ E+ ++ + P + + S + L++R
Sbjct: 210 DKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQR 269
Query: 643 LMSPSPSDRPS-----ATELLQ 659
L+ P R A E+ +
Sbjct: 270 LLMKDPKKRLGCGPRDADEIKE 291
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Score = 145 bits (367), Expect = 3e-39
Identities = 51/346 (14%), Positives = 106/346 (30%), Gaps = 77/346 (22%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
++ + +G G FG + N L+ + A+K + + ++ E T L
Sbjct: 7 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTG 62
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ + + G + + ++
Sbjct: 63 IPNVYYFGQEG---------------------------------------LHNVLVIDLL 83
Query: 477 PRTLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA-----RN 530
+L + + F + +Q++ + IH + +++RD+ P+N N
Sbjct: 84 GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN 143
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590
I + DFG+ KF + T + GT Y + G +
Sbjct: 144 MIYVVDFGMVKFYR--------DPVTKQHIPYREKKNLSGTARYMSINTHLGRE-QSRRD 194
Query: 591 DMYSLGIVFFEL-----WHPFSTAMERQIVLSDLKQKGELPP--SWVAKFSEQ-ESLLRR 642
D+ +LG VF A + + +K + P A F E+ +
Sbjct: 195 DLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHY 254
Query: 643 LMSPSPSDRPSATELLQDALPPQMEYELLDNILRMMHSSEDTSIYD 688
+ + P L L +L ++++ED +D
Sbjct: 255 ARNLAFDATPDYDYL----------QGLFSKVLERLNTTED-ENFD 289
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (363), Expect = 7e-39
Identities = 57/315 (18%), Positives = 103/315 (32%), Gaps = 68/315 (21%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLD---GRHYAVKKIRLKDKSLPVNDRILREVATLSRL 411
E + +G G FG V A+K + S V ++ L+E T+ +
Sbjct: 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCK-NCTSDSVREKFLQEALTMRQF 65
Query: 412 QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYI 471
H H+V+ E ++I
Sbjct: 66 DHPHIVKLIGVITEN-----------------------------------------PVWI 84
Query: 472 QMEYCPR-TLRQVFESYDH-FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDAR 529
ME C LR + + D Q+ LA++ + +HRD+ N+ +
Sbjct: 85 IMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSN 144
Query: 530 NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589
+ +K+GDFGL+++++ + + APE +
Sbjct: 145 DCVKLGDFGLSRYME--------------DSTYYKASKGKLPIKWMAPESINFR-RFTSA 189
Query: 590 ADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645
+D++ G+ +E+ PF ++ + GE P SL+ + +
Sbjct: 190 SDVWMFGVCMWEILMHGVKPFQGVKNNDVI--GRIENGERLPMPPNCPPTLYSLMTKCWA 247
Query: 646 PSPSDRPSATELLQD 660
PS RP TEL
Sbjct: 248 YDPSRRPRFTELKAQ 262
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Score = 144 bits (363), Expect = 8e-39
Identities = 53/314 (16%), Positives = 97/314 (30%), Gaps = 64/314 (20%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSR 410
+ + +G G FG V K A+K ++ + L E + +
Sbjct: 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQ 65
Query: 411 LQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLY 470
H +++R + +
Sbjct: 66 FSHHNIIRLEGVISKYK----------------------------------------PMM 85
Query: 471 IQMEYCPRTLRQVF--ESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
I EY F E F + R I G+ ++ +HRDL NI ++
Sbjct: 86 IITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS 145
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
K+ DFGL++ L+ D + +G +TAPE K
Sbjct: 146 NLVCKVSDFGLSRVLE------------DDPEATYTTSGGKIPIRWTAPEAISYR-KFTS 192
Query: 589 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645
+D++S GIV +E+ + V+ + G P+ + S L+ +
Sbjct: 193 ASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIND-GFRLPTPMDCPSAIYQLMMQCWQ 251
Query: 646 PSPSDRPSATELLQ 659
+ RP +++
Sbjct: 252 QERARRPKFADIVS 265
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 143 bits (362), Expect = 2e-38
Identities = 71/344 (20%), Positives = 120/344 (34%), Gaps = 85/344 (24%)
Query: 350 SSRYLNDFEELQPLGHGGFGHVVLCKN-KLDGRHYAVKKIRLKDKSLPVNDRILREVATL 408
R +E + +G G +G V ++ K GR A+K++R++ + +REVA L
Sbjct: 2 LCRADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVL 61
Query: 409 SRL---QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLE 465
L +H +VVR + DV
Sbjct: 62 RHLETFEHPNVVRLF-----------------------------------DVCTVSRTDR 86
Query: 466 STYLYIQMEYCPRTLRQVFESYDH--FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNN 523
T L + E+ + L + E + Q++ GL +H ++HRDL P N
Sbjct: 87 ETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQN 146
Query: 524 IFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583
I + IK+ DFGLA+ + T V T +Y APE+
Sbjct: 147 ILVTSSGQIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQS 190
Query: 584 PKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKG----------------- 623
D++S+G +F E++ F + + + L G
Sbjct: 191 S-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQA 249
Query: 624 ------ELPPSWVAKFSEQ-ESLLRRLMSPSPSDRPSATELLQD 660
+ +V E + LL + ++ +P+ R SA L
Sbjct: 250 FHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSH 293
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (365), Expect = 2e-38
Identities = 77/371 (20%), Positives = 132/371 (35%), Gaps = 102/371 (27%)
Query: 332 SQFWKPSVDSGSPNMSLPSSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK 391
+QF+ SV+ G ++ L ++ L+P+G G G V + + R+ A+KK+
Sbjct: 1 NQFY--SVEVGDSTFTV-----LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 53
Query: 392 DKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRA 451
++ R RE+ + + H++++ + +
Sbjct: 54 FQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLE--------------------- 92
Query: 452 ASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511
E +Y+ ME L QV + D E +L Q++ G+ H+H
Sbjct: 93 -------------EFQDVYLVMELMDANLCQVIQM--ELDHERMSYLLYQMLCGIKHLHS 137
Query: 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571
GIIHRDL P+NI + +KI DFGLA+ + T V T
Sbjct: 138 AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMM----------------TPYVVT 181
Query: 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPS 628
+Y APE+ G E D++S+G + E+ F ++Q G P
Sbjct: 182 RYYRAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240
Query: 629 WVAKF---------------------------------------SEQESLLRRLMSPSPS 649
++ K S+ LL +++ P+
Sbjct: 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300
Query: 650 DRPSATELLQD 660
R S + LQ
Sbjct: 301 KRISVDDALQH 311
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Score = 145 bits (365), Expect = 2e-38
Identities = 70/337 (20%), Positives = 112/337 (33%), Gaps = 84/337 (24%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQ 414
++ L P+G G +G V + G AVKK+ +S+ R RE+ L ++H+
Sbjct: 18 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHE 77
Query: 415 HVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQME 474
+V+ DV LE +
Sbjct: 78 NVIGLL-----------------------------------DVFTPARSLEEFNDVYLVT 102
Query: 475 YCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKI 534
+ + L QI+ GL +IH IIHRDL P+N+ + ++KI
Sbjct: 103 HLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKI 162
Query: 535 GDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594
DFGLA+ E TG V T +Y APEI W ++ D++S
Sbjct: 163 LDFGLARHTDDEM------------------TGYVATRWYRAPEIMLNWMHYNQTVDIWS 204
Query: 595 LGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQES------------- 638
+G + EL F + L+ G + K S + +
Sbjct: 205 VGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKM 264
Query: 639 ---------------LLRRLMSPSPSDRPSATELLQD 660
LL +++ R +A + L
Sbjct: 265 NFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 301
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Score = 144 bits (363), Expect = 5e-38
Identities = 74/391 (18%), Positives = 130/391 (33%), Gaps = 83/391 (21%)
Query: 329 SRVSQFWKPSVDSGSPNMSLPSSRY--LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVK 386
V +F + + PS L+ F+ ++ LG G FG V+L K+K G HYA+K
Sbjct: 13 ESVKEFLAKAKEDFLKKWETPSQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMK 72
Query: 387 KIRLKD-KSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASS 445
+ + L + L E L + +V+ ++ +
Sbjct: 73 ILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN------------------- 113
Query: 446 TFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEG 505
S + + F + A QIV
Sbjct: 114 --------------------SNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDG 565
++H +I+RDL P N+ D + I++ DFG AK +K
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT------------------ 195
Query: 566 TGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQK 622
GT APEI ++ D ++LG++ +E+ PF QI + K
Sbjct: 196 WTLCGTPEALAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGK 254
Query: 623 GELPPSWVAKFSEQESLLRRLMSPSPSDR-----PSATELLQDALPPQMEYELLDN---- 673
P + S+ + LLR L+ + R ++ ++ +
Sbjct: 255 VRFPSHF---SSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVE 311
Query: 674 --ILRMMHSSEDTSIYDKVVSSIFDEETLDM 702
+ DTS +D ++EE + +
Sbjct: 312 APFIPKFKGPGDTSNFDD-----YEEEEIRV 337
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 140 bits (354), Expect = 3e-37
Identities = 62/314 (19%), Positives = 100/314 (31%), Gaps = 45/314 (14%)
Query: 355 NDFEELQPLGHGGFGHVVLCK-----NKLDGRHYAVKKIRLKDKSLPVNDRILREVATLS 409
N + LG G FG VV AVK ++ L + ++ E+ LS
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLK-PSAHLTEREALMSELKVLS 81
Query: 410 RL-QHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
L H ++V A G + G L + R + T +
Sbjct: 82 YLGNHMNIVNLLGACTIGGPTLVITEYCCY-GDLLNFLRRKRDSFICSKTSPAIMEDDEL 140
Query: 469 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
D E Q+ +G+A + + IHRDL NI
Sbjct: 141 --------------------ALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTH 180
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
KI DFGLA+ +K V + APE
Sbjct: 181 GRITKICDFGLARDIK-------------NDSNYVVKGNARLPVKWMAPESIFNCV-YTF 226
Query: 589 KADMYSLGIVFFELW---HPFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645
++D++S GI +EL+ M + ++G S +E +++
Sbjct: 227 ESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWD 286
Query: 646 PSPSDRPSATELLQ 659
P RP+ +++Q
Sbjct: 287 ADPLKRPTFKQIVQ 300
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Score = 138 bits (347), Expect = 2e-36
Identities = 60/336 (17%), Positives = 116/336 (34%), Gaps = 89/336 (26%)
Query: 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRY 419
+ +G G FG V + K G AVK +++ + E+ L+H++++ +
Sbjct: 8 QESIGKGRFGEV--WRGKWRGEEVAVKIFSSREER---SWFREAEIYQTVMLRHENILGF 62
Query: 420 YQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR- 478
A ++ T L++ +Y
Sbjct: 63 IAAD------------------------------------NKDNGTWTQLWLVSDYHEHG 86
Query: 479 TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ--------GIIHRDLTPNNIFFDARN 530
+L Y E L GLAH+H + I HRDL NI
Sbjct: 87 SLFDYLNRY-TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNG 145
Query: 531 DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP-----K 585
I D GLA + T + + +VGT Y APE+ +
Sbjct: 146 TCCIADLGLAVR-----------HDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFE 194
Query: 586 IDEKADMYSLGIVFFELW-------------HPFSTAMERQIVLSDLKQ---KGELPPSW 629
++AD+Y++G+VF+E+ P+ + + ++++ + +L P+
Sbjct: 195 SFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNI 254
Query: 630 VAKFSEQES------LLRRLMSPSPSDRPSATELLQ 659
++ E+ ++R + + R +A + +
Sbjct: 255 PNRWQSCEALRVMAKIMRECWYANGAARLTALRIKK 290
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Score = 138 bits (347), Expect = 4e-36
Identities = 55/347 (15%), Positives = 110/347 (31%), Gaps = 103/347 (29%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-H 413
+D++ ++ LG G + V N + VK ++ K +I RE+ L L+
Sbjct: 35 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKK-----KKIKREIKILENLRGG 89
Query: 414 QHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQM 473
+++ + S +
Sbjct: 90 PNIITLADIVKDP--------------------------------------VSRTPALVF 111
Query: 474 EYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARN-D 531
E+ +Q++++ +I++ L + H GI+HRD+ P+N+ D +
Sbjct: 112 EHVNNTDFKQLYQT---LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRK 168
Query: 532 IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591
+++ D+GLA+F Q + +V + ++ PE+ + D D
Sbjct: 169 LRLIDWGLAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYSLD 212
Query: 592 MYSLGIVFFELW---HPFSTAMERQIVLSDL--------------KQKGELPPSWVAKFS 634
M+SLG + + PF + L + K EL P +
Sbjct: 213 MWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILG 272
Query: 635 EQE---------------------SLLRRLMSPSPSDRPSATELLQD 660
L +L+ R +A E ++
Sbjct: 273 RHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEH 319
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Score = 131 bits (330), Expect = 3e-34
Identities = 62/316 (19%), Positives = 108/316 (34%), Gaps = 50/316 (15%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLS 409
+ + +PLG G FG V+ R AVK ++ + + + ++ E+ L
Sbjct: 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLK-EGATHSEHRALMSELKILI 71
Query: 410 RLQHQH-VVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTY 468
+ H VV A + G G L++ S R
Sbjct: 72 HIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKR------------------ 113
Query: 469 LYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDA 528
E+ P + D E Q+ +G+ + + IHRDL NI
Sbjct: 114 ----NEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSE 169
Query: 529 RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588
+N +KI DFGLA+ + V + APE
Sbjct: 170 KNVVKICDFGLARDI-------------YKDPDYVRKGDARLPLKWMAPETIFDRV-YTI 215
Query: 589 KADMYSLGIVFFEL----WHPFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRL 643
++D++S G++ +E+ P+ + LK+ + P + E +
Sbjct: 216 QSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDYTTP--EMYQTMLDC 273
Query: 644 MSPSPSDRPSATELLQ 659
PS RP+ +EL++
Sbjct: 274 WHGEPSQRPTFSELVE 289
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Score = 129 bits (326), Expect = 1e-33
Identities = 52/325 (16%), Positives = 91/325 (28%), Gaps = 77/325 (23%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLS 409
+ LG G FG V K A+K + + S+ L E + +
Sbjct: 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVN-EAASMRERIEFLNEASVMK 78
Query: 410 RLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYL 469
HVVR +
Sbjct: 79 EFNCHHVVRLLGVVSQGQ----------------------------------------PT 98
Query: 470 YIQMEYCP-----------RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRD 518
+ ME R + +I +G+A+++ +HRD
Sbjct: 99 LVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRD 158
Query: 519 LTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578
L N +KIGDFG+ + + G + + +PE
Sbjct: 159 LAARNCMVAEDFTVKIGDFGMTRDI-------------YETDYYRKGGKGLLPVRWMSPE 205
Query: 579 IEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELPPSWVAKFS 634
+ +D++S G+V +E+ P+ Q++ +G L
Sbjct: 206 SLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVL--RFVMEGGLLDKPDNCPD 262
Query: 635 EQESLLRRLMSPSPSDRPSATELLQ 659
L+R +P RPS E++
Sbjct: 263 MLFELMRMCWQYNPKMRPSFLEIIS 287
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 128 bits (321), Expect = 4e-33
Identities = 56/351 (15%), Positives = 107/351 (30%), Gaps = 94/351 (26%)
Query: 355 NDFEELQPLGHGGFGHVVLCKNKLDGRH-------YAVKKIRLKDKSLPVNDRILREVAT 407
+ +PLG G FG VVL + + AVK ++ D + ++ E+
Sbjct: 13 DRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLK-SDATEKDLSDLISEMEM 71
Query: 408 LSRLQHQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLEST 467
+ + +
Sbjct: 72 MKMIGKHKNIINLLGACTQD---------------------------------------G 92
Query: 468 YLYIQMEYCPRT-----------------LRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510
LY+ +EY + + + Q+ G+ ++
Sbjct: 93 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLA 152
Query: 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVG 570
+ IHRDL N+ N +KI DFGLA+ + T
Sbjct: 153 SKKCIHRDLAARNVLVTEDNVMKIADFGLARDI-------------HHIDYYKKTTNGRL 199
Query: 571 TYFYTAPEIEQGWPKIDEKADMYSLGIVFFELW----HPFSTAMERQIVLSDLKQKGELP 626
+ APE ++D++S G++ +E++ P+ ++ L ++G
Sbjct: 200 PVKWMAPEALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELF--KLLKEGHRM 256
Query: 627 PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEYELLDNILRM 677
+E ++R PS RP+ +L++D LD I+ +
Sbjct: 257 DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED----------LDRIVAL 297
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 105 bits (261), Expect = 1e-24
Identities = 64/361 (17%), Positives = 111/361 (30%), Gaps = 104/361 (28%)
Query: 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416
+ ++ LG G F V L K+ ++ H A+K +R + E+ L R+
Sbjct: 15 YILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVR---GDKVYTEAAEDEIKLLQRVNDADN 71
Query: 417 VRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC 476
+ + D ++ + E
Sbjct: 72 TKEDSMGANHILKLLD-------------------------HFNHKGPNGVHVVMVFEVL 106
Query: 477 PRTLRQVFESYDHFDKEL--AWHLFRQIVEGLAHIHGQ-GIIHRDLTPNNIFFDARN--- 530
L + + Y+H L + +Q++ GL ++H + GIIH D+ P N+ + +
Sbjct: 107 GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPE 166
Query: 531 ---DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587
IKI D G A + + T Y +PE+ G P
Sbjct: 167 NLIQIKIADLGNACWYDEHYTNSI------------------QTREYRSPEVLLGAP-WG 207
Query: 588 EKADMYSLGIVFFELW---HPF------STAMERQIVLSDLKQKGELPPSWVA------- 631
AD++S + FEL F S + + ++ GELP +
Sbjct: 208 CGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRT 267
Query: 632 ---------------------------KFSEQES-----LLRRLMSPSPSDRPSATELLQ 659
KFS+ E+ L ++ P R A L+
Sbjct: 268 FFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 327
Query: 660 D 660
Sbjct: 328 H 328
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Score = 70.2 bits (171), Expect = 4e-14
Identities = 25/191 (13%), Positives = 49/191 (25%), Gaps = 52/191 (27%)
Query: 361 QPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL--------PVNDRILREVATLSRLQ 412
+ +G G V C ++ VK ++ S + +R +
Sbjct: 6 KLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNE 64
Query: 413 HQHVVRYYQAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQ 472
+ + + A +
Sbjct: 65 FRALQKLQGLAVPKVYAWEGN------------------------------------AVL 88
Query: 473 MEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDI 532
ME + E + I+E +A + +GI+H DL+ N+ I
Sbjct: 89 MELID------AKELYRVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGI 141
Query: 533 KIGDFGLAKFL 543
I DF + +
Sbjct: 142 WIIDFPQSVEV 152
|
| >d1ukxa_ d.20.1.3 (A:) EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mus musculus) [TaxId: 10090]} Length = 137 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: EIF2-alpha kinase 4 (GCN2-like protein) species: Mouse (Mus musculus) [TaxId: 10090]
Score = 58.9 bits (142), Expect = 8e-11
Identities = 26/75 (34%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
+ E++ V L V+C P YP P++ + KGL+ + L L++ A G V
Sbjct: 56 LAGEEVYVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC--GEV 113
Query: 61 MIFNLVEAAQEFLSE 75
MIF L Q FLSE
Sbjct: 114 MIFELAHHVQSFLSE 128
|
| >d2daya1 d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF25 {Human (Homo sapiens) [TaxId: 9606]} Length = 115 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: E3 ubiquitin-protein ligase RNF25 species: Human (Homo sapiens) [TaxId: 9606]
Score = 57.3 bits (138), Expect = 2e-10
Identities = 17/73 (23%), Positives = 34/73 (46%), Gaps = 2/73 (2%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
+ V L+++ YP++ P++ I +GL+ +L +L A + G
Sbjct: 45 EDQDSQYVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTA 102
Query: 61 MIFNLVEAAQEFL 73
M++ L+E +E L
Sbjct: 103 MLYELIEKGKEIL 115
|
| >d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} Length = 275 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: ATP phosphoribosyltransferase regulatory subunit HisZ species: Thermotoga maritima [TaxId: 2336]
Score = 60.6 bits (146), Expect = 2e-10
Identities = 36/249 (14%), Positives = 74/249 (29%), Gaps = 35/249 (14%)
Query: 772 HGGDLLELSHELRLPFIRWAISNQKSS-FKRYEISSVYRRAIGHSPPNRYLQGDFDIIGG 830
G+L + + + S K + VYR + S Q + +
Sbjct: 43 RKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYRYS--GSDLVAEYQLGLEKVPR 100
Query: 831 ASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMM 890
S EVL++ ++ + FF + + H + E + + EKV L+
Sbjct: 101 NSLDDSLEVLEIIVESASEFFE-GPVIVEIGHTGVYEDLLKEIPK--DLHEKVLNLI--- 154
Query: 891 GSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPAD 950
+K + L + + V ++ + + P +
Sbjct: 155 ----------DTKNLAEIEFLSHMKKIDLSRVEKI------IEDSIYRRSPEHLKTMDLP 198
Query: 951 KPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLL 1008
R+ L +L+ ++ ID + + L F ++ +
Sbjct: 199 LSVREDLLSASSFLQEKFPTVSVEIDLTLARTIEEYCGLIFTIYDTSSSRL--------V 250
Query: 1009 AVGGRYDYL 1017
A GG Y
Sbjct: 251 AAGGEYTVN 259
|
| >d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} Length = 324 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Thermus thermophilus [TaxId: 274]
Score = 53.8 bits (128), Expect = 4e-08
Identities = 38/339 (11%), Positives = 88/339 (25%), Gaps = 53/339 (15%)
Query: 725 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLLG-----DCPQFKRNTVKLLTHGGDL 776
+ + +V +++ A L E + ++ GG
Sbjct: 15 ELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRS 74
Query: 777 LELSHELRLPFIRWAISNQKSS-----FKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGA 831
L L E +R + + ++ Q +++ +G
Sbjct: 75 LTLRPEGTAAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSE 134
Query: 832 SALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMG 891
+ + +AE + + + + + + L+ E + E E L+
Sbjct: 135 NPILDAEAVVLLYECL-KELGLRRLKVKLSSVGDPEDRARYNAYLREVLSPHREALSEDS 193
Query: 892 SLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADK 951
R + + + R + + + L +
Sbjct: 194 KERLEENPMRILDSKSERD---------------------QALLKELGVRPMLDFLGEEA 232
Query: 952 PTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVG 1011
E +L + ++ + Y+ F+V + + L G
Sbjct: 233 RAHLKEVERHLERLSV--PYELEPALVRGLDYYVRTAFEVHH------EEIGAQSALGGG 284
Query: 1012 GRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ 1050
GRYD L + GVG + +E +
Sbjct: 285 GRYDGLSELLGGPRV----------PGVGFAFGVERVAL 313
|
| >d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 327 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 53.2 bits (126), Expect = 8e-08
Identities = 48/333 (14%), Positives = 99/333 (29%), Gaps = 41/333 (12%)
Query: 725 DTELRDYVVQVTKEMFRQHCAKHLE---IEP--MYLLGDCPQFKRNTVKLLTHGGDLLEL 779
D ++ ++ + +E + ++ +E +Y + + + T + GG + L
Sbjct: 17 DMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTL 76
Query: 780 SHELRLPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSPPNRYLQGDFDIIGGASALTE 836
E +R S + + + Q + DI G S +
Sbjct: 77 IPEATPSTVRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEAD 136
Query: 837 AEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQ 896
AEV+ + I+ R + +I +N ++E I G+ + V + +
Sbjct: 137 AEVIALASSILDRLGLQDIYEIRINSRKIMEEII--GGMTSSDPFSV-FSIIDRYHKISR 193
Query: 897 SSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKA 956
+ + R R G + + + R+
Sbjct: 194 EEFVDQLRSAGIGEDGVSMIADLCSGTRGIDEMARITGKSSEEIARMAAVEDL------- 246
Query: 957 LDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDY 1016
L ++ R D + SY+ + F+ + ++ A + GGRYD
Sbjct: 247 LASYGVKNVRY------DFSIVRGLSYYTGIVFEAYDRSGQFRA-------ILGGGRYDN 293
Query: 1017 LLHRMWDREYVGYASRTNPPSGVGASLALETII 1049
L M VG + I
Sbjct: 294 LASLMSGESV----------PAVGFGMGDAVIS 316
|
| >d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} Length = 325 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Staphylococcus aureus [TaxId: 1280]
Score = 46.1 bits (108), Expect = 1e-05
Identities = 48/344 (13%), Positives = 99/344 (28%), Gaps = 53/344 (15%)
Query: 721 YSDLDTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLLG-----DCPQFKRNTVKLLTH 772
D++ Y+ E+ + K + E L ++
Sbjct: 11 ILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDK 70
Query: 773 GGDLLELSHELRLPFIRWAISN-----QKSSFKRYEISSVYRRAIGHSPPNR-YLQGDFD 826
G + L E +R I + K Y ++R R + Q +
Sbjct: 71 GDRSITLRPEGTAAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVE 130
Query: 827 IIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAEL 886
IG + +AEVL + M I F + +N + + + +H E V
Sbjct: 131 AIGAENPSVDAEVLAMVMHIYQSFGLKH-LKLVINSVGDMASRKEYNEALVKHFEPVIHE 189
Query: 887 LAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGA 946
R + R L +++ + + + + +++
Sbjct: 190 FCSDCQSRLHTDPM--------RILDCKVDRDKEAIKTAPRITDFLNEESKAYYEQVKAY 241
Query: 947 LPADKPTRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGT 1006
L + D + Y+ + F++ Y +
Sbjct: 242 LDD-----------------LGIPYTEDPNLVRGLDYYTHTAFELMMDNPNYDGAITT-- 282
Query: 1007 LLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ 1050
L GGRY+ LL + +G+G +L++E ++
Sbjct: 283 -LCGGGRYNGLLELLDGPSE----------TGIGFALSIERLLL 315
|
| >d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Escherichia coli [TaxId: 562]
Score = 44.7 bits (104), Expect = 4e-05
Identities = 50/338 (14%), Positives = 96/338 (28%), Gaps = 53/338 (15%)
Query: 725 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLLG-----DCPQFKRNTVKLLTHGGDL 776
+T + + K + + + +E L ++ GD
Sbjct: 15 ETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDS 74
Query: 777 LELSHELRLPFIRWAISNQKSSFKRYEISSVYRRAIGHSP----PNRYLQGDFDIIGGAS 832
L L E +R I + + + + P ++ Q ++ G
Sbjct: 75 LTLRPEGTAGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQG 134
Query: 833 ALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGS 892
+AE++ +T +E + LN LEA ++ E+ E L
Sbjct: 135 PDIDAELIMLTARWWRALGISEHVTLELNSIGSLEARANYRDALVAFLEQHKEKL----- 189
Query: 893 LRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKP 952
+ K + ++L N A P L L +
Sbjct: 190 ----DEDCKRRMYTNPLRVLDSKN--------------PEVQALLNDAPALGDYLDEESR 231
Query: 953 TRKALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGG 1012
A L I ++ + Y+ F+ + T+ GG
Sbjct: 232 EHFAGLCKLLESAGI--AYTVNQRLVRGLDYYNRTVFEWVTNSLGSQGTV------CAGG 283
Query: 1013 RYDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ 1050
RYD L+ ++ R VG ++ LE ++
Sbjct: 284 RYDGLVEQLGGRAT----------PAVGFAMGLERLVL 311
|
| >d2daxa1 d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 {Human (Homo sapiens) [TaxId: 9606]} Length = 140 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: Uncharacterized protein C21orf6 species: Human (Homo sapiens) [TaxId: 9606]
Score = 42.1 bits (98), Expect = 5e-05
Identities = 16/76 (21%), Positives = 25/76 (32%), Gaps = 2/76 (2%)
Query: 2 GYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVM 61
++ L YP P++ + L++S L L + G V
Sbjct: 60 VSDEKMAMFSLACILPFKYPAVLPEITV-RSVLLSRSQQTQLNTDLTAFLQKHCH-GDVC 117
Query: 62 IFNLVEAAQEFLSEIV 77
I N E +E S V
Sbjct: 118 ILNATEWVREHASGYV 133
|
| >d2dawa1 d.20.1.3 (A:8-148) RWD domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: RWD domain-containing protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Score = 41.2 bits (96), Expect = 1e-04
Identities = 13/77 (16%), Positives = 24/77 (31%), Gaps = 2/77 (2%)
Query: 1 MGYEDLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRV 60
+ E+ V L V YPY +L L + L L + G +
Sbjct: 61 LQIEEPKVKIDLQVTMPHSYPYLALQLFGR-SSELDRHQQLLLNKGLTSYIGTFDP-GEL 118
Query: 61 MIFNLVEAAQEFLSEIV 77
+ ++ Q+ +
Sbjct: 119 CVCAAIQWLQDNSASYF 135
|
| >d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} Length = 318 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: ATP phosphoribosyltransferase regulatory subunit HisZ species: Lactococcus lactis [TaxId: 1358]
Score = 42.3 bits (98), Expect = 2e-04
Identities = 44/336 (13%), Positives = 99/336 (29%), Gaps = 48/336 (14%)
Query: 725 DTELRDYVVQVTKEMFRQHCAKHLE---IEPMYLL-----GDCPQFKRNTVKLLTHGGDL 776
+ + +++F + + E L + + + H G
Sbjct: 14 QVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQS 73
Query: 777 LELSHELRLPFIRWAISNQKSSFKRYEISSVYRRA--IGHSPPNRYLQGDFDIIGGASAL 834
+ L ++ LP +R + S+ RY R Q ++ G ++
Sbjct: 74 ITLRYDFTLPLVRLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADK 133
Query: 835 TEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLR 894
+E E+L + + ++ + + + + + A E ++ L
Sbjct: 134 SELEILSLALQVIEQLGLNK-TVFEIGSAKFFQRLCQLADGSTELLTEL---LLKKDLSG 189
Query: 895 PQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTR 954
+ K+ + R LL+ + + + + + +
Sbjct: 190 LNAFIEKNNFSKELRGLLK------------EIFITNELSRLENLVTNTKDDVLISSFDQ 237
Query: 955 KALDELYLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRY 1014
L + + D M P Y+ +L F+ +S P + GGRY
Sbjct: 238 LKEFSEKLSMIKPIII---DLGMVPKMDYYTDLMFKAYSSAANQP--------ILSGGRY 286
Query: 1015 DYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQ 1050
D LL +G ++TI++
Sbjct: 287 DQLLSNF-----------QEEAFAIGFCCHMDTILK 311
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1170 | |||
| d1nvra_ | 271 | Cell cycle checkpoint kinase chk1 {Human (Homo sap | 100.0 | |
| d1t4ha_ | 270 | Protein kinase wnk1 {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2j4za1 | 263 | Aurora-related kinase 1 (aurora-2) {Human (Homo sa | 100.0 | |
| d1yhwa1 | 293 | pak1 {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2java1 | 269 | Serine/threonine-protein kinase Nek2 {Human (Homo | 100.0 | |
| d2jfla1 | 288 | STE20-like serine/threonine-protein kinase, SLK {H | 100.0 | |
| d1wu7a2 | 327 | Histidyl-tRNA synthetase (HisRS) {Archaeon Thermop | 100.0 | |
| d1uu3a_ | 288 | 3-phosphoinositide dependent protein kinase-1 Pdk1 | 100.0 | |
| d1a06a_ | 307 | Calmodulin-dependent protein kinase {Rat (Rattus n | 100.0 | |
| d1s9ja_ | 322 | Dual specificity mitogen-activated protein kinase | 100.0 | |
| d1o6la_ | 337 | Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9 | 100.0 | |
| d1u5ra_ | 309 | Serine/threonine protein kinase TAO2 {Rat (Rattus | 100.0 | |
| d1fota_ | 316 | cAMP-dependent PK, catalytic subunit {Baker's yeas | 100.0 | |
| d1jksa_ | 293 | Death-associated protein kinase, Dap {Human (Homo | 100.0 | |
| d1z7ma1 | 318 | ATP phosphoribosyltransferase regulatory subunit H | 100.0 | |
| d1koaa2 | 350 | Twitchin, kinase domain {Caenorhabditis elegans, p | 100.0 | |
| d1koba_ | 352 | Twitchin, kinase domain {California sea hare (Aply | 100.0 | |
| d1phka_ | 277 | gamma-subunit of glycogen phosphorylase kinase (Ph | 100.0 | |
| d1rdqe_ | 350 | cAMP-dependent PK, catalytic subunit {Mouse (Mus m | 100.0 | |
| d1omwa3 | 364 | G-protein coupled receptor kinase 2 {Cow (Bos taur | 100.0 | |
| d1gz8a_ | 298 | Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T | 100.0 | |
| d1xjda_ | 320 | Protein kinase C, theta type {Human (Homo sapiens) | 100.0 | |
| d1ua2a_ | 299 | Cell division protein kinase 7, CDK7 {Human (Homo | 100.0 | |
| d1tkia_ | 321 | Titin, kinase domain {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1opja_ | 287 | Abelsone tyrosine kinase (abl) {Mouse (Mus musculu | 100.0 | |
| d1uwha_ | 276 | B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1sm2a_ | 263 | Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie | 100.0 | |
| d1qpca_ | 272 | Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax | 100.0 | |
| d1h4vb2 | 324 | Histidyl-tRNA synthetase (HisRS) {Thermus thermoph | 100.0 | |
| d1ob3a_ | 286 | Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) | 100.0 | |
| d1jpaa_ | 299 | ephb2 receptor tyrosine kinase {Mouse (Mus musculu | 100.0 | |
| d1blxa_ | 305 | Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T | 100.0 | |
| d1xbba_ | 277 | Tyrosine-protein kinase SYK {Human (Homo sapiens) | 100.0 | |
| d1xwsa_ | 273 | Proto-oncogene serine/threonine-protein kinase Pim | 100.0 | |
| d1o6ya_ | 277 | Mycobacterial protein kinase PknB, catalytic domai | 100.0 | |
| d1cm8a_ | 346 | MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: | 100.0 | |
| d2ozaa1 | 335 | MAP kinase activated protein kinase 2, mapkap2 {Hu | 100.0 | |
| d1rjba_ | 325 | Fl cytokine receptor {Human (Homo sapiens) [TaxId: | 100.0 | |
| d1mqba_ | 283 | epha2 receptor tyrosine kinase {Human (Homo sapien | 100.0 | |
| d1k2pa_ | 258 | Bruton's tyrosine kinase (Btk) {Human (Homo sapien | 100.0 | |
| d1u59a_ | 285 | Tyrosine-protein kinase ZAP-70 {Human (Homo sapien | 100.0 | |
| d3blha1 | 318 | Cell division protein kinase 9, CDK9 {Human (Homo | 100.0 | |
| d1q5ka_ | 350 | Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho | 100.0 | |
| d1unla_ | 292 | Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T | 100.0 | |
| d1qe0a2 | 325 | Histidyl-tRNA synthetase (HisRS) {Staphylococcus a | 100.0 | |
| d1pmea_ | 345 | MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606 | 100.0 | |
| d1ywna1 | 299 | Vascular endothelial growth factor receptor 2 (kdr | 100.0 | |
| d1fmka3 | 285 | c-src tyrosine kinase {Human (Homo sapiens) [TaxId | 100.0 | |
| d1mp8a_ | 273 | Focal adhesion kinase 1 (fak) {Human (Homo sapiens | 100.0 | |
| d1xkka_ | 317 | EGF receptor tyrosine kinase, Erbb-1 {Human (Homo | 100.0 | |
| d1lufa_ | 301 | Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d2b1pa1 | 355 | c-jun N-terminal kinase (jnk3s) {Human (Homo sapie | 100.0 | |
| d1kmma2 | 322 | Histidyl-tRNA synthetase (HisRS) {Escherichia coli | 100.0 | |
| d3bqca1 | 328 | Protein kinase CK2, alpha subunit {Rattus norvegic | 100.0 | |
| d1fvra_ | 309 | Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d2gfsa1 | 348 | MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1byga_ | 262 | Carboxyl-terminal src kinase (csk) {Human (Homo sa | 100.0 | |
| d1u46a_ | 273 | Activated CDC42 kinase 1, ACK1 {Human (Homo sapien | 100.0 | |
| d1vzoa_ | 322 | Ribosomal protein S6 kinase alpha 5, Msk1 {Human ( | 100.0 | |
| d1r0pa_ | 311 | Hepatocyte growth factor receptor, c-MET {Human (H | 100.0 | |
| d1fgka_ | 299 | Fibroblast growth factor receptor 1 {Human (Homo s | 100.0 | |
| d1t46a_ | 311 | c-KIT receptor {Human (Homo sapiens) [TaxId: 9606] | 100.0 | |
| d1usya_ | 275 | ATP phosphoribosyltransferase regulatory subunit H | 100.0 | |
| d1p4oa_ | 308 | Insulin-like growth factor 1 receptor {Human (Homo | 100.0 | |
| d1ckia_ | 299 | Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax | 100.0 | |
| d1vjya_ | 303 | Type I TGF-beta receptor R4 {Human (Homo sapiens) | 100.0 | |
| d1csna_ | 293 | Casein kinase-1, CK1 {Fission yeast (Schizosacchar | 100.0 | |
| d1q8ya_ | 362 | Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T | 100.0 | |
| d1zara2 | 191 | Rio2 serine protein kinase C-terminal domain {Arch | 99.84 | |
| d1kmma1 | 99 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.53 | |
| d1wu7a1 | 97 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.52 | |
| d1h4vb1 | 96 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.5 | |
| d1qf6a1 | 110 | Threonyl-tRNA synthetase (ThrRS), C-terminal domai | 99.5 | |
| d1qe0a1 | 95 | Histidyl-tRNA synthetase (HisRS), C-terminal domai | 99.47 | |
| d1nyra1 | 113 | Threonyl-tRNA synthetase (ThrRS), C-terminal domai | 99.45 | |
| d1nj1a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Me | 99.3 | |
| d1g5ha1 | 127 | The aaRS-like accessory subunit of mitochondrial p | 99.24 | |
| d2daya1 | 115 | E3 ubiquitin-protein ligase RNF25 {Human (Homo sap | 99.23 | |
| d1nj8a3 | 268 | Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanoc | 99.22 | |
| d1qf6a4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Escherichia coli | 99.21 | |
| d1nyra4 | 291 | Threonyl-tRNA synthetase (ThrRS) {Staphylococcus a | 99.17 | |
| d1nj8a1 | 126 | Prolyl-tRNA synthetase (ProRS) domain {Archaeon (M | 99.16 | |
| d1atia1 | 111 | Glycyl-tRNA synthetase (GlyRS), C-terminal domain | 99.11 | |
| d1ukxa_ | 137 | EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mu | 99.11 | |
| d1hc7a1 | 127 | Prolyl-tRNA synthetase (ProRS) domain {Thermus the | 99.06 | |
| d1nj1a3 | 265 | Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanoth | 98.95 | |
| d1b76a2 | 331 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 98.93 | |
| d1hc7a2 | 272 | Prolyl-tRNA synthetase (ProRS) {Thermus thermophil | 98.87 | |
| d2daxa1 | 140 | Uncharacterized protein C21orf6 {Human (Homo sapie | 98.7 | |
| d2dawa1 | 141 | RWD domain-containing protein 2 {Human (Homo sapie | 98.6 | |
| d1g5ha2 | 290 | The aaRS-like accessory subunit of mitochondrial p | 97.9 | |
| d1seta2 | 311 | Seryl-tRNA synthetase (SerRS) {Thermus thermophilu | 97.75 | |
| d1j7la_ | 263 | Type IIIa 3',5"-aminoglycoside phosphotransferase | 97.55 | |
| d2pula1 | 392 | Methylthioribose kinase MtnK {Bacillus subtilis [T | 97.38 | |
| d1jjca_ | 266 | Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS | 97.22 | |
| d1c0aa3 | 346 | Aspartyl-tRNA synthetase (AspRS) {Escherichia coli | 97.19 | |
| d1nd4a_ | 255 | Aminoglycoside 3'-phosphotransferase IIa (Kanamyci | 96.94 | |
| d1atia2 | 394 | Glycyl-tRNA synthetase (GlyRS) {Thermus thermophil | 96.87 | |
| d1b8aa2 | 335 | Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococ | 96.85 | |
| d1l0wa3 | 356 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 96.81 | |
| d1e1oa2 | 342 | Lysyl-tRNA synthetase (LysRS) {Escherichia coli, g | 96.77 | |
| d1eova2 | 353 | Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (S | 96.76 | |
| d1nnha_ | 293 | Hypothetical protein PF1951 {Archaeon Pyrococcus f | 96.7 | |
| d1n9wa2 | 304 | Aspartyl-tRNA synthetase (AspRS) {Thermus thermoph | 95.47 | |
| d1zyla1 | 325 | RdoA {Escherichia coli [TaxId: 562]} | 95.31 | |
| d1nw1a_ | 395 | Choline kinase {Caenorhabditis elegans [TaxId: 623 | 93.93 | |
| d2ppqa1 | 316 | Homoserine kinase ThrB {Agrobacterium tumefaciens | 93.1 | |
| d1v95a_ | 130 | Nuclear receptor coactivator 5 (KIAA1637) {Human ( | 91.93 | |
| d1jjcb5 | 207 | Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, | 91.45 |
| >d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell cycle checkpoint kinase chk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.5e-52 Score=463.43 Aligned_cols=260 Identities=28% Similarity=0.481 Sum_probs=218.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
++++|++++.||+|+||+||+|+++.+|+.||||+++.... ....+.+.+|+.+|++++|||||+++++|.+
T Consensus 3 f~~dy~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~-~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~~~------- 74 (271)
T d1nvra_ 3 FVEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRA-VDCPENIKKEICINKMLNHENVVKFYGHRRE------- 74 (271)
T ss_dssp TTTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC--------CHHHHHHHHHTCCCTTBCCEEEEEEE-------
T ss_pred CCcceEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhc-chHHHHHHHHHHHHHhCCCCCEeeEeeeecc-------
Confidence 57899999999999999999999999999999999976532 2334578999999999999999999999843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ |+|.+++.....+++.+++.++.||+.||+|||+
T Consensus 75 ---------------------------------~~~~~ivmEy~~gg~L~~~l~~~~~l~e~~~~~i~~qi~~al~ylH~ 121 (271)
T d1nvra_ 75 ---------------------------------GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121 (271)
T ss_dssp ---------------------------------TTEEEEEEECCTTEEGGGGSBTTTBCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CceeEEEEeccCCCcHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999888889999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+|+.+..... ....++.+||+.|||||++.+...++.++|
T Consensus 122 ~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~-------------~~~~~~~~GT~~Y~APE~~~~~~~~~~~~D 188 (271)
T d1nvra_ 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGTLPYVAPELLKRREFHAEPVD 188 (271)
T ss_dssp TTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTE-------------ECCBCCCCSCGGGSCTHHHHCSSBCHHHHH
T ss_pred cCCccCcccHHHEEECCCCCEEEccchhheeeccCCc-------------cccccceeeCcCccCHhHhcCCCCCCCcee
Confidence 9999999999999999999999999999987643221 111345689999999999988554578999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||||++|||++ ||...................++.+...++++.+||.+||+.||.+|||++|+|+||||++.
T Consensus 189 iwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~ 266 (271)
T d1nvra_ 189 VWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP 266 (271)
T ss_dssp HHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCTTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred eeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence 9999999999997 88655544444444444555556677788999999999999999999999999999999754
|
| >d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase wnk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.9e-50 Score=445.92 Aligned_cols=253 Identities=24% Similarity=0.382 Sum_probs=214.5
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
|++.++||+|+||+||+|+++.+|+.||+|++..........+.+.+|+.+|++++|||||+++++|....
T Consensus 11 ~~~~~~iG~G~fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~~--------- 81 (270)
T d1t4ha_ 11 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTV--------- 81 (270)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEES---------
T ss_pred EEeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeecc---------
Confidence 46778999999999999999999999999999876666666778999999999999999999999985421
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC--
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG-- 513 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g-- 513 (1170)
.....+|+|||||+ |+|.+++.+...+++..++.++.||+.||+|||+++
T Consensus 82 ---------------------------~~~~~~~ivmE~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~gl~yLH~~~~~ 134 (270)
T d1t4ha_ 82 ---------------------------KGKKCIVLVTELMTSGTLKTYLKRFKVMKIKVLRSWCRQILKGLQFLHTRTPP 134 (270)
T ss_dssp ---------------------------SSCEEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred ---------------------------ccCCEEEEEEeCCCCCcHHHHHhccccccHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 12467899999997 599999998889999999999999999999999999
Q ss_pred ccccCCCCCceeecC-CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 514 IIHRDLTPNNIFFDA-RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 514 IiHrDLKp~NILi~~-~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|+||||||+|||+++ ++.+||+|||+|+..... ...+.+||+.|||||++.+ .|+.++||
T Consensus 135 IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~-----------------~~~~~~GT~~Y~aPE~~~~--~~~~~~DI 195 (270)
T d1t4ha_ 135 IIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS-----------------FAKAVIGTPEFMAPEMYEE--KYDESVDV 195 (270)
T ss_dssp CCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT-----------------SBEESCSSCCCCCGGGGGT--CCCTHHHH
T ss_pred EEeCCcChhhceeeCCCCCEEEeecCcceeccCC-----------------ccCCcccCccccCHHHhCC--CCCCcCch
Confidence 999999999999974 789999999999853211 1235689999999999986 48999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
|||||++|||++ ||............+......+......++++++||.+||++||++|||++|+|+||||+
T Consensus 196 wSlGvilyel~~g~~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk 270 (270)
T d1t4ha_ 196 YAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ 270 (270)
T ss_dssp HHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred hhHHHHHHHHHHCCCCCCCcccHHHHHHHHHcCCCCcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence 999999999997 887655555444444433333334455678999999999999999999999999999985
|
| >d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Aurora-related kinase 1 (aurora-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-50 Score=448.86 Aligned_cols=251 Identities=29% Similarity=0.495 Sum_probs=216.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++|++.+.||+|+||+||+|+++.+|+.||||++..... .......+.+|+.+|+.++|||||+++++|.+
T Consensus 5 l~dy~i~~~iG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~------- 77 (263)
T d2j4za1 5 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHD------- 77 (263)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEEC-------
T ss_pred hhHeEEEEEEecCCCcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEEEE-------
Confidence 6899999999999999999999999999999999974321 12235678999999999999999999999843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|||+
T Consensus 78 ---------------------------------~~~~~ivmEy~~~g~L~~~l~~~~~l~e~~~~~i~~qi~~al~~lH~ 124 (263)
T d2j4za1 78 ---------------------------------ATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHS 124 (263)
T ss_dssp ---------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEeecCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 457899999997 5999999988899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+|+..... .....+||+.|||||++.+ ..|+.++|
T Consensus 125 ~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~-----------------~~~~~~Gt~~Y~APE~~~~-~~~~~~~D 186 (263)
T d2j4za1 125 KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSS-----------------RRTTLCGTLDYLPPEMIEG-RMHDEKVD 186 (263)
T ss_dssp TTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCC-----------------CCEETTEEGGGCCHHHHTT-CCCCTTHH
T ss_pred CCeeeeeeccccceecCCCCEeecccceeeecCCC-----------------cccccCCCCcccCHHHHcC-CCCCchhh
Confidence 99999999999999999999999999999754211 1234589999999999998 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
||||||+||||++ ||......+....+......+|. ..++++++||.+||++||.+|||++|+|+|||+..
T Consensus 187 iwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~ 260 (263)
T d2j4za1 187 LWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFPD---FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 260 (263)
T ss_dssp HHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCT---TSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHH
T ss_pred hhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCc---cCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCC
Confidence 9999999999997 88877666666555554444443 46789999999999999999999999999998753
|
| >d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: pak1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.6e-50 Score=451.07 Aligned_cols=252 Identities=22% Similarity=0.390 Sum_probs=216.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|+++++||+|+||+||+|+++.+|+.||||+++..... ..+.+.+|+.+|+.++|||||+++++|.+
T Consensus 20 ~~Y~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~~~E~~il~~l~HpnIv~~~~~~~~--------- 88 (293)
T d1yhwa1 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP--KKELIINEILVMRENKNPNIVNYLDSYLV--------- 88 (293)
T ss_dssp TTBCSCEECCCSSSCEEEEEEBTTTCCEEEEEEEEGGGCS--CHHHHHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred cccEEEEEEecCcCcEEEEEEECCCCCEEEEEEEecccCh--HHHHHHHHHHHHHhCCCCCEeeEeEEEEE---------
Confidence 5799999999999999999999999999999999865433 34679999999999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
..++|+|||||+ |+|.+++.. ..+++.+++.++.||+.||+|||++|
T Consensus 89 -------------------------------~~~~~ivmEy~~gg~L~~~~~~-~~l~~~~~~~i~~qi~~aL~yLH~~~ 136 (293)
T d1yhwa1 89 -------------------------------GDELWVVMEYLAGGSLTDVVTE-TCMDEGQIAAVCRECLQALEFLHSNQ 136 (293)
T ss_dssp -------------------------------TTEEEEEEECCTTCBHHHHHHH-SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEEecCCCcHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence 457899999997 588887654 57999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++++||+|||+|+.+.... ......+||+.|||||++.+ ..|+.++|||
T Consensus 137 iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~---------------~~~~~~~gt~~Y~aPE~~~~-~~~~~~~Diw 200 (293)
T d1yhwa1 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ---------------SKRSTMVGTPYWMAPEVVTR-KAYGPKVDIW 200 (293)
T ss_dssp EECCCCSGGGEEECTTCCEEECCCTTCEECCSTT---------------CCBCCCCSCGGGCCHHHHSS-SCBCTHHHHH
T ss_pred CcccCCcHHHeEECCCCcEeeccchhheeecccc---------------ccccccccCCCccChhhhcC-CCCCchhcee
Confidence 9999999999999999999999999998653221 11245689999999999998 5689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
||||++|||++ ||...........+........+.+...++++++||.+||+.||.+|||++|+|+||||+.
T Consensus 201 SlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~ 275 (293)
T d1yhwa1 201 SLGIMAIEMIEGEPPYLNENPLRALYLIATNGTPELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKI 275 (293)
T ss_dssp HHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSCCCSSGGGSCHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGG
T ss_pred hHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCCCCcccCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCC
Confidence 99999999997 8877666665555555443334455677889999999999999999999999999999964
|
| >d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine-protein kinase Nek2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-50 Score=446.51 Aligned_cols=254 Identities=30% Similarity=0.545 Sum_probs=207.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++++.||+|+||+||+|+++.+|+.||||+++....+....+.+.+|+.+|++++|||||+++++|.+.
T Consensus 3 ~edy~~~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~------- 75 (269)
T d2java1 3 AEDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDR------- 75 (269)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC--------
T ss_pred chhCEEeEEEecCCCeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEeC-------
Confidence 4789999999999999999999999999999999987766666677899999999999999999999988542
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES----YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~----~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
....+|||||||+ |+|.+++.. ...+++..++.++.||+.||+|
T Consensus 76 -------------------------------~~~~~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~y 124 (269)
T d2java1 76 -------------------------------TNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 124 (269)
T ss_dssp ----------------------------------CEEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------CCCEEEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHH
Confidence 2346899999997 599998853 3569999999999999999999
Q ss_pred HHhCC-----ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 509 IHGQG-----IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 509 LHs~g-----IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
||++| ||||||||+||||+.++.+||+|||+|+.+.... ...++.+||+.|||||++.+
T Consensus 125 lH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~---------------~~~~~~~gt~~Y~APE~l~~- 188 (269)
T d2java1 125 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDT---------------SFAKAFVGTPYYMSPEQMNR- 188 (269)
T ss_dssp HHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC--------------------------CCCSCCCHHHHTT-
T ss_pred HHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCC---------------CccccCCCCcccCCHHHHcC-
Confidence 99976 9999999999999999999999999999764321 11245689999999999987
Q ss_pred CCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 584 PKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 584 ~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
..|+.++|||||||++|||++ ||......+....+.. +..++.+...++++.+||++||+.||.+|||+.|+|+|
T Consensus 189 ~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~--~~~~~~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~h 266 (269)
T d2java1 189 MSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIRE--GKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILEN 266 (269)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH--TCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTS
T ss_pred CCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHc--CCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 579999999999999999997 8877666655544433 33344445678899999999999999999999999999
Q ss_pred cCC
Q 001059 661 ALP 663 (1170)
Q Consensus 661 ~~~ 663 (1170)
||.
T Consensus 267 p~i 269 (269)
T d2java1 267 PLI 269 (269)
T ss_dssp TTC
T ss_pred CcC
Confidence 984
|
| >d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: STE20-like serine/threonine-protein kinase, SLK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-50 Score=448.47 Aligned_cols=258 Identities=25% Similarity=0.354 Sum_probs=218.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.|++++.||+|+||+||+|+++.+|+.||||+++... ....+.+.+|+.+|++++|||||+++++|.+
T Consensus 12 d~Y~i~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~--------- 80 (288)
T d2jfla1 12 DFWEIIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKS--EEELEDYMVEIDILASCDHPNIVKLLDAFYY--------- 80 (288)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECSS--SGGGGGTHHHHHHHHHCCCTTBCCEEEEEEE---------
T ss_pred cCeEEeEEEeeCCCcEEEEEEECCCCeEEEEEEECcCC--HHHHHHHHHHHHHHHhCCCCCCCeEEEEEee---------
Confidence 46999999999999999999999999999999997543 3345678999999999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ |+|.+++.. ...+++.+++.++.||+.||+|||++
T Consensus 81 -------------------------------~~~~~lvmEy~~~g~L~~~~~~~~~~l~e~~~~~i~~qi~~gL~ylH~~ 129 (288)
T d2jfla1 81 -------------------------------ENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHDN 129 (288)
T ss_dssp -------------------------------TTEEEEEEECCTTEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCeEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence 457899999997 589888765 45699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC----CCCCCc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG----WPKIDE 588 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~----~~~~~~ 588 (1170)
||+||||||+|||++.++.+||+|||+|+....... ...+.+||+.|||||++.+ ...|+.
T Consensus 130 ~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~---------------~~~~~~Gt~~y~APE~l~~~~~~~~~y~~ 194 (288)
T d2jfla1 130 KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ---------------RRDSFIGTPYWMAPEVVMCETSKDRPYDY 194 (288)
T ss_dssp TEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHH---------------HHTCCCSCCTTCCHHHHTTCSTTTSSTTT
T ss_pred CEEEeecChhheeECCCCCEEEEechhhhccCCCcc---------------cccccccccccCCHHHHhhcccCCCCCCh
Confidence 999999999999999999999999999976532210 1234689999999999853 245899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
++|||||||++|||++ ||......+....+..........+...++++++||++||+.||.+|||+.|+|+|||+..
T Consensus 195 k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~ 274 (288)
T d2jfla1 195 KADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTV 274 (288)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCCSSGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCC
T ss_pred hhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCC
Confidence 9999999999999997 8887776666666665444444455678899999999999999999999999999999976
Q ss_pred chHH
Q 001059 666 MEYE 669 (1170)
Q Consensus 666 ~~~~ 669 (1170)
....
T Consensus 275 ~~~~ 278 (288)
T d2jfla1 275 DSNK 278 (288)
T ss_dssp CCCH
T ss_pred CCCC
Confidence 5443
|
| >d1wu7a2 d.104.1.1 (A:3-329) Histidyl-tRNA synthetase (HisRS) {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=100.00 E-value=3.5e-49 Score=451.38 Aligned_cols=307 Identities=16% Similarity=0.199 Sum_probs=248.5
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-CcccccceEEEeccCCceeeecCCCCHHH
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CPQFKRNTVKLLTHGGDLLELSHELRLPF 787 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~~~~~~my~f~D~~G~~laLRPD~T~~i 787 (1170)
..++|++|++|.++..++++++.++++|++|||++|+||+| .+... ++...++||+|.|++|+.++||||+|+|+
T Consensus 5 ~~~~G~~D~~p~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~~~~~~g~~~~~~~~~f~D~~g~~l~LRpD~T~~i 84 (327)
T d1wu7a2 5 EKIRGFRDFYPEDMDVEKFIFKTAEEAAEAFGFRRIDFPSLEYLDLYRIKSGEELLQQTYSFVDKGGREVTLIPEATPST 84 (327)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEETHHHHTTSCTTGGGGSCEEECTTSCEEEECSCSHHHH
T ss_pred CCCCCCccCCHHHHHHHHHHHHHHHHHHHHcCCeEeECCccchHhhccccCchhHHHHHhhhhcccchhhcccccccchh
Confidence 46899999999999999999999999999999999999999 33333 78889999999999999999999999999
Q ss_pred HHHHHhCC--CCceeEEEecCeEEcCCCCCCC-CceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHH
Q 001059 788 IRWAISNQ--KSSFKRYEISSVYRRAIGHSPP-NRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGD 864 (1170)
Q Consensus 788 aR~~~~~~--~~P~r~~Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~ 864 (1170)
||+++++. ..|+|+||+|+|||+++++.++ |||+|+|+|+||.++..+|+|+|.++.++++.+|+.+.+.|.|||++
T Consensus 85 ar~~~~~~~~~~p~k~~y~g~VfR~~~~~~g~~re~~Q~G~EiiG~~~~~~D~Eii~l~~~~l~~~~~~~~~~i~l~~~~ 164 (327)
T d1wu7a2 85 VRMVTSRKDLQRPLRWYSFPKVWRYEEPQAGRYREHYQFNADIFGSDSPEADAEVIALASSILDRLGLQDIYEIRINSRK 164 (327)
T ss_dssp HHHHTTCTTCCSSEEEEECCEEECCCCSCSSCCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHH
T ss_pred hhHhhhhhhccccceeeccCcceeccccccCCcchhhhhhhhhcCCcchHHHHHHHHHHHHHHhccccccceeecccchh
Confidence 99988754 4599999999999998887655 57999999999999999999999999999999999666899999999
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHh
Q 001059 865 LLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLR 944 (1170)
Q Consensus 865 il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~ 944 (1170)
+++.+++.++.++. ..+...++++++. ..+.+.+++ ...+...+....+..+.. .. ..++.+.
T Consensus 165 i~~~~l~~l~~~~~--~~~~~~~~~~~~~---------~~~~~~~~l-~~~~~~~~~~~~l~~~~~-~~----~~l~~~~ 227 (327)
T d1wu7a2 165 IMEEIIGGMTSSDP--FSVFSIIDRYHKI---------SREEFVDQL-RSAGIGEDGVSMIADLCS-GT----RGIDEMA 227 (327)
T ss_dssp HHHHHHHTTCSSCH--HHHHHHHHTTTTS---------CHHHHHHHH-HHTTCCHHHHHHHHHHHH-SC----BCHHHHH
T ss_pred hHHHHHHhhhhhHH--HHHHHHHHHHHhh---------ccchhhhhh-hhhhhhhHHHhhhhhhcc-cc----hhhhHHH
Confidence 99999998877653 3445566666643 233443333 335666666666666552 11 2233444
Q ss_pred ccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcc
Q 001059 945 GALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMW 1022 (1170)
Q Consensus 945 ~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg 1022 (1170)
..+.......+.+..+ .+..+++ +.|.||++++||++||||+||++|..... ..+||+|||||+|++.||
T Consensus 228 ~~~~~~~~~~~~l~~l~~~l~~~~~-~~i~~D~~~~r~~~YYtGivFe~~~~~~~-------~~~i~~GGRYD~L~~~f~ 299 (327)
T d1wu7a2 228 RITGKSSEEIARMAAVEDLLASYGV-KNVRYDFSIVRGLSYYTGIVFEAYDRSGQ-------FRAILGGGRYDNLASLMS 299 (327)
T ss_dssp HHTTCCCHHHHHHHHHHHHHHHTTC-CCCEECTTCCTTTTTCSSEEEEEEETTSS-------CSCSSEEEECTTHHHHHH
T ss_pred hhhchhhhHHHHHHHHHHHHHhcCC-cceeEccccCCCCCCcCCeEEEEEecCCC-------cceeeecccchHHHHhcC
Confidence 4344445555666666 7788887 46999999999999999999999985421 247999999999999996
Q ss_pred cccccccCCCCCCCCceEEeccHHHHHhhccC
Q 001059 1023 DREYVGYASRTNPPSGVGASLALETIIQHYPV 1054 (1170)
Q Consensus 1023 ~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~ 1054 (1170)
+. ++||||||+++|||+.+|+.
T Consensus 300 g~----------~~pAvGfsl~~~~l~~~l~~ 321 (327)
T d1wu7a2 300 GE----------SVPAVGFGMGDAVISLLLKR 321 (327)
T ss_dssp SC----------CCCEEEEEEEHHHHHHHHHH
T ss_pred CC----------CCCeEEEEeeHHHHHHHHHh
Confidence 53 46999999999999999873
|
| >d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: 3-phosphoinositide dependent protein kinase-1 Pdk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.5e-50 Score=448.92 Aligned_cols=259 Identities=29% Similarity=0.467 Sum_probs=218.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
.++|++++.||+|+||+||+|+++.+|+.||||+++.... .....+.+.+|+.+|++++|||||+++++|.+
T Consensus 7 p~dy~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~------- 79 (288)
T d1uu3a_ 7 PEDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD------- 79 (288)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEEEC-------
T ss_pred CCCCEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEEEE-------
Confidence 4789999999999999999999999999999999975321 12234678999999999999999999998832
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||+
T Consensus 80 ---------------------------------~~~~~ivmEy~~gg~L~~~~~~~~~l~e~~~~~~~~qi~~al~ylH~ 126 (288)
T d1uu3a_ 80 ---------------------------------DEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHG 126 (288)
T ss_dssp ---------------------------------SSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEEccCCCCHHHhhhccCCCCHHHHHHHHHHHHHHHHhhcc
Confidence 467899999997 5999999999999999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|||||||||+|||++.++.+||+|||+|+.+..... ....++.+||+.|||||++.+ ..|+.++|
T Consensus 127 ~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~-------------~~~~~~~~GT~~Y~APE~~~~-~~~~~~~D 192 (288)
T d1uu3a_ 127 KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESK-------------QARANSFVGTAQYVSPELLTE-KSACKSSD 192 (288)
T ss_dssp TTEECSCCSGGGEEECTTSCEEECCCTTCEECC-----------------------CCCCGGGCCHHHHHT-CCCCHHHH
T ss_pred ccEEcCcCCccccccCCCceEEecccccceecccCCc-------------ccccccccCCccccCceeecc-CCCCcccc
Confidence 9999999999999999999999999999987542210 112245689999999999998 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHH------HHhccC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATE------LLQDAL 662 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~e------iL~~~~ 662 (1170)
||||||++|||++ ||......+....+......+|. ..++++++||++||+.||.+|||++| +++|||
T Consensus 193 iwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpf 269 (288)
T d1uu3a_ 193 LWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPE---KFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPF 269 (288)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCT---TCCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGG
T ss_pred eehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCCc---cCCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCc
Confidence 9999999999997 89877777666666655544443 56789999999999999999999987 578999
Q ss_pred CCCchHH
Q 001059 663 PPQMEYE 669 (1170)
Q Consensus 663 ~~~~~~~ 669 (1170)
|....++
T Consensus 270 f~~i~w~ 276 (288)
T d1uu3a_ 270 FESVTWE 276 (288)
T ss_dssp GTTCCCT
T ss_pred cCCCCHH
Confidence 9887654
|
| >d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Calmodulin-dependent protein kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=2.8e-49 Score=447.87 Aligned_cols=255 Identities=25% Similarity=0.387 Sum_probs=204.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.+.|++.+.||+|+||+||+|+++.+|+.||||+++..... .....+.+|+.+|+.++|||||+++++|.+
T Consensus 8 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~-~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-------- 78 (307)
T d1a06a_ 8 RDIYDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALE-GKEGSMENEIAVLHKIKHPNIVALDDIYES-------- 78 (307)
T ss_dssp GGTEEEEEESBSGGGGGEEEEEETTTCCEEEEEEEEC-----------CHHHHHHHTCCCTTBCCEEEEEEC--------
T ss_pred ccceEEEEEEeeccCeEEEEEEECCCCCEEEEEEEchHHhh-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--------
Confidence 35699999999999999999999999999999999755432 234568899999999999999999998832
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
..++|+|||||+ |+|.+++...+.+++.+++.++.||+.||+|||++
T Consensus 79 --------------------------------~~~~~lvmE~~~gg~L~~~l~~~~~l~e~~~~~~~~qi~~al~ylH~~ 126 (307)
T d1a06a_ 79 --------------------------------GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDL 126 (307)
T ss_dssp --------------------------------SSEEEEEECCCCSCBHHHHHHTCSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCEEEEEEeccCCCcHHHhhhcccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 467899999997 69999999888999999999999999999999999
Q ss_pred CccccCCCCCceeec---CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 513 GIIHRDLTPNNIFFD---ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 513 gIiHrDLKp~NILi~---~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
||+||||||+|||+. .++.+||+|||+|+...... ...+.+||+.|||||++.+ ..|+.+
T Consensus 127 ~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~----------------~~~~~~GT~~y~APE~~~~-~~~~~~ 189 (307)
T d1a06a_ 127 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGS----------------VLSTACGTPGYVAPEVLAQ-KPYSKA 189 (307)
T ss_dssp TCCCSCCCGGGEEESSSSTTCCEEECCC----------------------------------CTTSCHHHHTT-CCCCTH
T ss_pred eeeeEEecccceeecccCCCceEEEeccceeEEccCCC----------------eeeeeeeCccccCcHHHcC-CCCCcH
Confidence 999999999999995 47899999999998653221 1234689999999999998 569999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCC
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
+|||||||++|||++ ||......+....+......++ +.+...++++.+||++||++||.+|||++|+++|||+.+
T Consensus 190 ~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~ 269 (307)
T d1a06a_ 190 VDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAG 269 (307)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTTS
T ss_pred HHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCC
Confidence 999999999999997 8887777666666665554443 345678899999999999999999999999999999975
Q ss_pred c
Q 001059 666 M 666 (1170)
Q Consensus 666 ~ 666 (1170)
.
T Consensus 270 ~ 270 (307)
T d1a06a_ 270 D 270 (307)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.7e-49 Score=453.04 Aligned_cols=254 Identities=25% Similarity=0.402 Sum_probs=209.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-++|+++++||+|+||+||+|+++.+|+.||+|+++... ......++.+|+.+|+.++|||||+++++|.+
T Consensus 5 ~d~y~~~~~iG~G~fg~V~~~~~~~~~~~vAiK~i~~~~-~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~-------- 75 (322)
T d1s9ja_ 5 DDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI-KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-------- 75 (322)
T ss_dssp GGGEEEEEEEECCSSCCEEEEEETTTTEEEEEEEEECCC-CTTHHHHHHHHGGGGGGCCCTTBCCEEEEEEC--------
T ss_pred ccCCEEEEEEecCCCeEEEEEEECCCCcEEEEEEEChhh-CHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE--------
Confidence 478999999999999999999999999999999998543 33456789999999999999999999999843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh-
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG- 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs- 511 (1170)
...+|+|||||+| +|.+++.+.+.+++..++.++.||+.||+|||+
T Consensus 76 --------------------------------~~~~~iVmEy~~gg~L~~~l~~~~~l~~~~~~~~~~qil~aL~yLH~~ 123 (322)
T d1s9ja_ 76 --------------------------------DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREK 123 (322)
T ss_dssp --------------------------------SSEEEEEEECCTTEEHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCEEEEEEEcCCCCcHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 4578999999974 999999988899999999999999999999997
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++++||+|||+|+.+.... .++.+||+.|||||++.+ ..|+.++|
T Consensus 124 ~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~-----------------~~~~~GT~~Y~APEvl~~-~~y~~~~D 185 (322)
T d1s9ja_ 124 HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-----------------ANSFVGTRSYMSPERLQG-THYSVQSD 185 (322)
T ss_dssp HCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHT-----------------C---CCSSCCCCHHHHHC-SCCCTTHH
T ss_pred CCEEccccCHHHeeECCCCCEEEeeCCCccccCCCc-----------------cccccCCccccCchHHcC-CCCCcHHH
Confidence 599999999999999999999999999999764321 245689999999999998 57999999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHH-----------------------------------------HhhhcCCCCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLS-----------------------------------------DLKQKGELPP 627 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~-----------------------------------------~l~~~~~~p~ 627 (1170)
|||+||++|||++ ||.+....+.... ... ....|.
T Consensus 186 iWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 264 (322)
T d1s9ja_ 186 IWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV-NEPPPK 264 (322)
T ss_dssp HHHHHHHHHHHHHSSCCSSCCCTTHHHHHC------------------------------CCCCHHHHHHHHH-TSCCCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccccccccccccccccccchhHHHHHhhhh-ccCCcc
Confidence 9999999999996 8865432211000 000 000111
Q ss_pred -ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 628 -SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 628 -~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.....++++.+||++||+.||.+|||++|+|+|||+++..
T Consensus 265 ~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~~ 305 (322)
T d1s9ja_ 265 LPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD 305 (322)
T ss_dssp CCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred CccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcCC
Confidence 1112467899999999999999999999999999987543
|
| >d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Pkb kinase (Akt-2) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-49 Score=449.97 Aligned_cols=259 Identities=27% Similarity=0.385 Sum_probs=223.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
.+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|+.+|+.++|||||+++++|.
T Consensus 3 ~l~dy~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~------- 75 (337)
T d1o6la_ 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQ------- 75 (337)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEE-------
T ss_pred chHhcEEEEEEecCcCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeeec-------
Confidence 36899999999999999999999999999999999975321 1223567899999999999999999999884
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
+..++|+|||||+ |+|.+++...+.+++..++.++.||+.||+|||
T Consensus 76 ---------------------------------~~~~~~iv~ey~~gg~L~~~~~~~~~~~e~~~~~~~~qil~al~ylH 122 (337)
T d1o6la_ 76 ---------------------------------THDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEYLH 122 (337)
T ss_dssp ---------------------------------CSSEEEEEEECCTTCBHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cccccccceeccCCCchhhhhhcccCCcHHHHHHHHHHHhhhhhhhh
Confidence 3567899999997 599999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++|||||||||+|||++.+|++||+|||+|+...... ......+||+.|||||++.+ ..|+.++
T Consensus 123 ~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~---------------~~~~~~~GT~~Y~aPE~~~~-~~y~~~~ 186 (337)
T d1o6la_ 123 SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG---------------ATMKTFCGTPEYLAPEVLED-NDYGRAV 186 (337)
T ss_dssp HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTT---------------CCBCCCEECGGGCCGGGGSS-SCBCTTH
T ss_pred hcCccccccCHHHeEecCCCCEEEeecccccccccCC---------------cccccceeCHHHhhhhhccC-CCCChhh
Confidence 9999999999999999999999999999998643211 12345789999999999998 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhccC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQDAL 662 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~~~ 662 (1170)
|||||||++|||++ ||......+....+......+| ...++++++||++||++||.+||+ +.++++|||
T Consensus 187 DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p---~~~s~~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~ 263 (337)
T d1o6la_ 187 DWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP---RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRF 263 (337)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGG
T ss_pred cccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC---ccCCHHHHHHHHhhccCCchhhcccccccHHHHHcCcc
Confidence 99999999999997 8887777666666655444444 356789999999999999999994 999999999
Q ss_pred CCCchHHH
Q 001059 663 PPQMEYEL 670 (1170)
Q Consensus 663 ~~~~~~~~ 670 (1170)
|.+..++.
T Consensus 264 f~~i~~~~ 271 (337)
T d1o6la_ 264 FLSINWQD 271 (337)
T ss_dssp GTTCCHHH
T ss_pred cccCCHHH
Confidence 99987653
|
| >d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Serine/threonine protein kinase TAO2 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=3.3e-49 Score=447.61 Aligned_cols=251 Identities=24% Similarity=0.392 Sum_probs=212.3
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC-hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS-LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~-~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
.|+.+++||+|+||+||+|+++.+|+.||||+++..... ....+.+.+|+.+|++++|||||+++++|.+
T Consensus 16 ~y~~l~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~--------- 86 (309)
T d1u5ra_ 16 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLR--------- 86 (309)
T ss_dssp HEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEE---------
T ss_pred hcEeeEEEecCCCeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEE---------
Confidence 499999999999999999999999999999999865433 3345678999999999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+|+|||||++ +|..++....++++.+++.++.||+.||+|||++|
T Consensus 87 -------------------------------~~~~~iv~E~~~~g~l~~~~~~~~~l~e~~~~~i~~qi~~aL~yLH~~~ 135 (309)
T d1u5ra_ 87 -------------------------------EHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHN 135 (309)
T ss_dssp -------------------------------TTEEEEEEECCSEEHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCEEEEEEEecCCCchHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence 4578999999986 56556667778999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCCccch
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKAD 591 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~~ksD 591 (1170)
||||||||+|||++.++.+||+|||+|+.... ....+||+.|||||++.+. ..|+.++|
T Consensus 136 iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~-------------------~~~~~GT~~Y~APE~~~~~~~~~y~~~~D 196 (309)
T d1u5ra_ 136 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-------------------ANSFVGTPYWMAPEVILAMDEGQYDGKVD 196 (309)
T ss_dssp CBCCCCSGGGEEEETTTEEEECCCTTCBSSSS-------------------BCCCCSCGGGCCHHHHTTTTSCCBCTHHH
T ss_pred EeccCCCcceEEECCCCCEEEeecccccccCC-------------------CCccccCccccCHHHHhccCCCCcCchhh
Confidence 99999999999999999999999999975421 1345899999999998753 35899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||||||++|||++ ||......+....+.... ..+......++++++||.+||+.||.+|||++++|+|||+.+.
T Consensus 197 iwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~ 273 (309)
T d1u5ra_ 197 VWSLGITCIELAERKPPLFNMNAMSALYHIAQNE-SPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRE 273 (309)
T ss_dssp HHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSC-CCCCSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSC
T ss_pred hhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCC-CCCCCCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCC
Confidence 9999999999997 887766666555554432 2222334567899999999999999999999999999998543
|
| >d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=9.5e-49 Score=445.31 Aligned_cols=255 Identities=27% Similarity=0.443 Sum_probs=222.2
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||+++.... .....+.+.+|+.+|+.++|||||+++++|.+
T Consensus 3 l~dy~i~~~lG~G~fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~------- 75 (316)
T d1fota_ 3 LQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQD------- 75 (316)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEEC-------
T ss_pred hhHeEEEEEEecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeEee-------
Confidence 5799999999999999999999999999999999974321 12235678999999999999999999999843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||+ |+|..++.....+++..++.++.||+.||+|||+
T Consensus 76 ---------------------------------~~~~~ivmE~~~gg~l~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~ 122 (316)
T d1fota_ 76 ---------------------------------AQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHS 122 (316)
T ss_dssp ---------------------------------SSEEEEEECCCCSCBHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ---------------------------------CCeeeeEeeecCCccccccccccccccccHHHHHHHHHHHhhhhhcc
Confidence 467899999997 5889999988899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+|||++.++.+||+|||+|+..... .++.+||+.|||||++.+ ..|+.++|
T Consensus 123 ~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~------------------~~~~~Gt~~Y~APE~l~~-~~y~~~~D 183 (316)
T d1fota_ 123 KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV------------------TYTLCGTPDYIAPEVVST-KPYNKSID 183 (316)
T ss_dssp TTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC------------------BCCCCSCTTTCCHHHHTT-CCBCTTHH
T ss_pred CcEEccccCchheeEcCCCCEEEecCccceEeccc------------------cccccCcccccCHHHHcC-CCCCchhh
Confidence 99999999999999999999999999999865311 245689999999999988 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~ 663 (1170)
||||||++|||++ ||......+....+......+|+ ..+++++++|.+||.+||.+|+ |++++++||||
T Consensus 184 iwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p~---~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f 260 (316)
T d1fota_ 184 WWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFPP---FFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWF 260 (316)
T ss_dssp HHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCCT---TSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred ccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCCC---CCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCccc
Confidence 9999999999997 99887777776666665555544 4567999999999999999996 99999999999
Q ss_pred CCchHHH
Q 001059 664 PQMEYEL 670 (1170)
Q Consensus 664 ~~~~~~~ 670 (1170)
++..++-
T Consensus 261 ~~i~~~~ 267 (316)
T d1fota_ 261 KEVVWEK 267 (316)
T ss_dssp SSCCHHH
T ss_pred ccCCHHH
Confidence 9988764
|
| >d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Death-associated protein kinase, Dap species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.1e-48 Score=438.05 Aligned_cols=257 Identities=26% Similarity=0.395 Sum_probs=219.6
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----hhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----LPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~----~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.+.|++++.||+|+||+||+|+++.+|+.||||+++..... ....+.+.+|+.+|++++|||||+++++|.+
T Consensus 9 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~---- 84 (293)
T d1jksa_ 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYEN---- 84 (293)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEEC----
T ss_pred ccCEEEeEEEecCCCeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEEEE----
Confidence 35699999999999999999999999999999999754322 1235679999999999999999999999833
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|||||||+ |+|.+++...+.+++..++.++.||+.||+|
T Consensus 85 ------------------------------------~~~~~iv~E~~~gg~L~~~i~~~~~l~~~~~~~~~~qi~~al~y 128 (293)
T d1jksa_ 85 ------------------------------------KTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYY 128 (293)
T ss_dssp ------------------------------------SSEEEEEEECCCSCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCccccchhccccccchhHHHHHHHHHHHHHHh
Confidence 467899999997 5999999988899999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCC----CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFDARN----DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~----~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
||++||+||||||+|||++.++ .+||+|||+|+...... ...+..||+.|||||++.+ .
T Consensus 129 LH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~----------------~~~~~~~t~~y~APE~~~~-~ 191 (293)
T d1jksa_ 129 LHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGN----------------EFKNIFGTPEFVAPEIVNY-E 191 (293)
T ss_dssp HHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSC----------------BCSCCCCCGGGCCHHHHTT-C
T ss_pred hhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCc----------------cccccCCCCcccCHHHHcC-C
Confidence 9999999999999999998776 59999999998653221 1244689999999999987 5
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.|+.++|||||||++|||++ ||......+....+.......++ .+...++++++||++||+.||.+|||++++|+|
T Consensus 192 ~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~h 271 (293)
T d1jksa_ 192 PLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271 (293)
T ss_dssp CBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 78999999999999999997 88877777666665554444443 345678899999999999999999999999999
Q ss_pred cCCCCch
Q 001059 661 ALPPQME 667 (1170)
Q Consensus 661 ~~~~~~~ 667 (1170)
|||+...
T Consensus 272 p~~~~~~ 278 (293)
T d1jksa_ 272 PWIKPKD 278 (293)
T ss_dssp TTTCC--
T ss_pred cccCCCC
Confidence 9998754
|
| >d1z7ma1 d.104.1.1 (A:6-323) ATP phosphoribosyltransferase regulatory subunit HisZ {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: ATP phosphoribosyltransferase regulatory subunit HisZ species: Lactococcus lactis [TaxId: 1358]
Probab=100.00 E-value=3.4e-48 Score=441.50 Aligned_cols=300 Identities=15% Similarity=0.243 Sum_probs=239.3
Q ss_pred CCCccccccchhhhhhhhHHhHHHHHHHHcCCcccccccee----cc---CCCc-ccccceEEEeccCCceeeecCCCCH
Q 001059 714 DNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPMY----LL---GDCP-QFKRNTVKLLTHGGDLLELSHELRL 785 (1170)
Q Consensus 714 ~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~----~~---~~~~-~~~~~my~f~D~~G~~laLRPD~T~ 785 (1170)
.|+|++|++|.++..++++++.++++|++|||++|.||+|. +. +.++ ...++||+|.|++|+.++||||+|+
T Consensus 3 lP~g~~d~~~~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~~E~~d~~~~~~~~~~~~~~~~~~~~~d~~g~~l~LRpD~T~ 82 (318)
T d1z7ma1 3 LPEESAEMTLNQVKSLRQIEGRLRKLFSLKNYQEVMPPSFEYTQLYTALESNGKTFNQEKMFQFIKHEGQSITLRYDFTL 82 (318)
T ss_dssp CCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEHHHHHHHHCSSSCCCTTSCCEEECTTCCEEEECCCSHH
T ss_pred CCCchhhhCHHHHHHHHHHHHHHHHHHHHcCCEEEECCccchHHHhhccCCCcccccccceeEeecCCccEEEeeccccc
Confidence 58999999999999999999999999999999999999992 22 2233 3468999999999999999999999
Q ss_pred HHHHHHHhCC-CCceeEEEecCeEEcCCCCCC-CCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcH
Q 001059 786 PFIRWAISNQ-KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHG 863 (1170)
Q Consensus 786 ~iaR~~~~~~-~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~ 863 (1170)
|+||+++++. ..|.|+||+|+|||+++++.+ .+||+|+|+|+||.+++.+|+|||.+++++|+.+|+++ ++|+|||+
T Consensus 83 ~iaR~~~~~~~~~~~r~~Y~g~vfR~~~~~~~r~rE~~Q~g~EiiG~~~~~ad~Eii~l~~e~l~~lgi~~-~~i~i~~~ 161 (318)
T d1z7ma1 83 PLVRLYSQIKDSTSARYSYFGKIFRKEKRHKGRSTENYQIGIELFGESADKSELEILSLALQVIEQLGLNK-TVFEIGSA 161 (318)
T ss_dssp HHHHHHHTCCSCCCEEEEEEEECCCCCC-------CCEEEEEEEESSCHHHHHHHHHHHHHHHHHHHTCSS-EEEEEEEH
T ss_pred hHHHHHHHhcccCCcccccccceeEEccccccccchhhhhheeccccchhhHHHHHHHHHHHHHHHhhhcc-ccccchhh
Confidence 9999998754 469999999999999887754 56799999999999999999999999999999999986 99999999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHH
Q 001059 864 DLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRL 943 (1170)
Q Consensus 864 ~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l 943 (1170)
++++.+++..+.+.+ .+.+++.+++. ..+ .+++.+.++.......+..+. ..+......+.+
T Consensus 162 ~l~~~ll~~~~~~~e---~~~~~l~~k~~------------~~l-~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~ 223 (318)
T d1z7ma1 162 KFFQRLCQLADGSTE---LLTELLLKKDL------------SGL-NAFIEKNNFSKELRGLLKEIF--ITNELSRLENLV 223 (318)
T ss_dssp HHHHHHHHHTTTCHH---HHHHHHHTTCH------------HHH-HHHHTTSCCCHHHHHHHHHHT--TCCCHHHHHHHH
T ss_pred hHHHHHHHhhhhhhh---hhHHHHHhhhc------------cch-hhhhhhhhhHHHHHHHHhhcc--cchhhHHHHHHh
Confidence 999999998887754 34556666551 111 344555666665555554443 233322222222
Q ss_pred hccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhc
Q 001059 944 RGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRM 1021 (1170)
Q Consensus 944 ~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~f 1021 (1170)
.. ..+....+.+++| +++.+++...+.||++++||++||||+||++|..+.+ .+||+|||||+|++.|
T Consensus 224 ~~--~~~~~~~~~l~~l~~~~~~~~~~~~i~~d~~~~r~~~YYtG~vF~~~~~~~~--------~~i~~GGRYD~L~~~~ 293 (318)
T d1z7ma1 224 TN--TKDDVLISSFDQLKEFSEKLSMIKPIIIDLGMVPKMDYYTDLMFKAYSSAAN--------QPILSGGRYDQLLSNF 293 (318)
T ss_dssp HH--TTCHHHHHHHHHHHHHHHHHTTTSCCEECTTCCCSSTTCCSEEEEEEETTEE--------EEEEEEEECHHHHHTS
T ss_pred hh--hhHHHHHHhHHHHhhHHHHhhhccccccCccccCCCcCCCCeEEEEEECCCC--------CeEEECcchHHHHHhc
Confidence 22 2245667778887 7888888888999999999999999999999987544 3799999999999888
Q ss_pred ccccccccCCCCCCCCceEEeccHHHHHhhcc
Q 001059 1022 WDREYVGYASRTNPPSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 1022 g~~~~~~~~g~~~~~pAvGfaiglerL~~~L~ 1053 (1170)
|. ++||||||+++|||+.+|+
T Consensus 294 g~-----------~~~avGfsi~ld~i~~~l~ 314 (318)
T d1z7ma1 294 QE-----------EAFAIGFCCHMDTILKALE 314 (318)
T ss_dssp SS-----------CCCCEEEEEEHHHHHHHHH
T ss_pred CC-----------CCCEEEEEeeHHHHHHHHH
Confidence 64 3599999999999998875
|
| >d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: Caenorhabditis elegans, pjk4 [TaxId: 6239]
Probab=100.00 E-value=2.9e-48 Score=447.21 Aligned_cols=258 Identities=23% Similarity=0.412 Sum_probs=221.0
Q ss_pred CccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 350 SSRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 350 ~~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
....+++|++++.||+|+||+||+|+++.+|+.||||++.... ....+.+.+|+.+|++++|||||+++++|.+
T Consensus 21 ~~~il~~Y~i~~~lG~G~fg~Vy~~~~~~~g~~vAvK~i~~~~--~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~---- 94 (350)
T d1koaa2 21 HDHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH--ESDKETVRKEIQTMSVLRHPTLVNLHDAFED---- 94 (350)
T ss_dssp CSCGGGTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECCCS--HHHHHHHHHHHHHHHHTCCTTBCCEEEEEEE----
T ss_pred CCCCccCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEcccc--hhhHHHHHHHHHHHHhCCCCCCCcEEEEEEE----
Confidence 3456789999999999999999999999999999999996432 3345678999999999999999999998843
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHH-hcCCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFE-SYDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~-~~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
...+|+|||||+ |+|.+++. ..+.+++..++.++.||+.||+
T Consensus 95 ------------------------------------~~~~~ivmE~~~gg~L~~~l~~~~~~l~e~~~~~i~~qi~~aL~ 138 (350)
T d1koaa2 95 ------------------------------------DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLC 138 (350)
T ss_dssp ------------------------------------TTEEEEEECCCCSCBHHHHHTCTTSCBCHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEcCCCCCHHHHHHhhcCCCCHHHHHHHHHHHHHHHH
Confidence 457899999997 59999885 4567999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecC--CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDA--RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPK 585 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~--~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~ 585 (1170)
|||++|||||||||+|||++. ++.+||+|||+|+.+.... ...+.+||+.|||||++.+ ..
T Consensus 139 ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~----------------~~~~~~gT~~Y~aPEv~~~-~~ 201 (350)
T d1koaa2 139 HMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQ----------------SVKVTTGTAEFAAPEVAEG-KP 201 (350)
T ss_dssp HHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTS----------------CEEEECSCTTTCCHHHHHT-CC
T ss_pred HHHhcCCeeeeechhHeeeccCCCCeEEEeecchheeccccc----------------ccceecCcccccCHHHHcC-CC
Confidence 999999999999999999964 5789999999998653221 1234689999999999998 56
Q ss_pred CCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 586 IDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 586 ~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
|+.++|||||||++|||++ ||......+....+.......+. .+...++++++||++||+.||++|||++|+|+||
T Consensus 202 ~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp 281 (350)
T d1koaa2 202 VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 281 (350)
T ss_dssp BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHST
T ss_pred CChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCc
Confidence 8999999999999999996 88877777666666655555443 4566788999999999999999999999999999
Q ss_pred CCCCc
Q 001059 662 LPPQM 666 (1170)
Q Consensus 662 ~~~~~ 666 (1170)
|+...
T Consensus 282 ~~~~~ 286 (350)
T d1koaa2 282 WLTPG 286 (350)
T ss_dssp TTSCT
T ss_pred ccCCC
Confidence 99765
|
| >d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Twitchin, kinase domain species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]
Probab=100.00 E-value=5.2e-48 Score=445.39 Aligned_cols=257 Identities=23% Similarity=0.373 Sum_probs=220.5
Q ss_pred ccccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 351 SRYLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 351 ~~~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
+...++|++++.||+|+||+||+|+++.+|+.||||+++... ......+.+|+.+|++++|||||+++++|.+
T Consensus 25 ~~~~d~Y~i~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~--~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~----- 97 (352)
T d1koba_ 25 GSVYDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY--PLDKYTVKNEISIMNQLHHPKLINLHDAFED----- 97 (352)
T ss_dssp SCGGGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--HHHHHHHHHHHHHHTTCCSTTBCCEEEEEEC-----
T ss_pred CCcccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEECCcc--hhHHHHHHHHHHHHHhCCCCCCCcEEEEEEE-----
Confidence 345678999999999999999999999999999999997543 2345678899999999999999999999843
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|||||||+ |+|.+.+...+ ++++.+++.++.||+.||+|
T Consensus 98 -----------------------------------~~~~~ivmE~~~gg~L~~~~~~~~~~l~e~~~~~i~~qi~~aL~y 142 (352)
T d1koba_ 98 -----------------------------------KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKH 142 (352)
T ss_dssp -----------------------------------SSEEEEEEECCCCCBHHHHTTCTTCCBCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEEcCCCChHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 467899999997 59988876544 69999999999999999999
Q ss_pred HHhCCccccCCCCCceeec--CCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 509 IHGQGIIHRDLTPNNIFFD--ARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~--~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
||++|||||||||+|||++ .++.+||+|||+|+.+.... .....+||+.|||||++.+ ..|
T Consensus 143 lH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~----------------~~~~~~gt~~y~aPE~~~~-~~~ 205 (352)
T d1koba_ 143 MHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDE----------------IVKVTTATAEFAAPEIVDR-EPV 205 (352)
T ss_dssp HHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTS----------------CEEEECSSGGGCCHHHHTT-CCB
T ss_pred HHHCCeeecccccccccccccCCCeEEEeecccceecCCCC----------------ceeeccCcccccCHHHHcC-CCC
Confidence 9999999999999999998 56899999999998754221 1234579999999999988 569
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccC
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDAL 662 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~ 662 (1170)
+.++|||||||++|||++ ||......+....+......++. .+...++++.+||++||+.||.+|||+.|+|+|||
T Consensus 206 ~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~ 285 (352)
T d1koba_ 206 GFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPW 285 (352)
T ss_dssp CHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTT
T ss_pred CCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHh
Confidence 999999999999999997 89877777766666655555443 45678899999999999999999999999999999
Q ss_pred CCCc
Q 001059 663 PPQM 666 (1170)
Q Consensus 663 ~~~~ 666 (1170)
|+..
T Consensus 286 ~~~~ 289 (352)
T d1koba_ 286 LKGD 289 (352)
T ss_dssp TSSC
T ss_pred hCCC
Confidence 9764
|
| >d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: gamma-subunit of glycogen phosphorylase kinase (Phk) species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=100.00 E-value=1.1e-47 Score=428.40 Aligned_cols=258 Identities=24% Similarity=0.422 Sum_probs=221.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-------hhHHHHHHHHHHHHhcc-CCCceeEEEEEe
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-------PVNDRILREVATLSRLQ-HQHVVRYYQAWF 424 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-------~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~ 424 (1170)
|.++|++.+.||+|+||+||+|+++.+|+.||||+++...... ...+.+.+|+.+|++++ |||||+++++|.
T Consensus 1 f~~~y~~~~~iG~G~~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~ 80 (277)
T d1phka_ 1 FYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYE 80 (277)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEE
T ss_pred CcccCEEceEEecCcCeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeecc
Confidence 3579999999999999999999999999999999998654321 12346889999999997 999999999983
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIV 503 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~ 503 (1170)
+ ..++|||||||+ |+|.+++...+.+++.+++.++.||+
T Consensus 81 ~----------------------------------------~~~~~ivmE~~~~g~L~~~l~~~~~l~e~~~~~~~~qi~ 120 (277)
T d1phka_ 81 T----------------------------------------NTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 120 (277)
T ss_dssp C----------------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHH
T ss_pred c----------------------------------------CcceEEEEEcCCCchHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 2 467899999996 59999999889999999999999999
Q ss_pred HHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccC-
Q 001059 504 EGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQG- 582 (1170)
Q Consensus 504 ~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~- 582 (1170)
.||+|||++||+||||||+|||++.++.+||+|||+|+.+.... ..+..+||+.|+|||++.+
T Consensus 121 ~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~~PE~~~~~ 184 (277)
T d1phka_ 121 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGE----------------KLREVCGTPSYLAPEIIECS 184 (277)
T ss_dssp HHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTC----------------CBCCCCSCGGGCCHHHHHHH
T ss_pred HHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccCCC----------------ceeeeeccCCCCCHHHhhcc
Confidence 99999999999999999999999999999999999998753221 1244689999999999863
Q ss_pred ----CCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 583 ----WPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 583 ----~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
...++.++||||+||++|||++ ||...........+.......+ +.+...++++++||++||++||.+|||+
T Consensus 185 ~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~ 264 (277)
T d1phka_ 185 MNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTA 264 (277)
T ss_dssp HCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCH
T ss_pred ccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCH
Confidence 2457899999999999999997 8988777666666665544433 3556789999999999999999999999
Q ss_pred HHHHhccCCCCc
Q 001059 655 TELLQDALPPQM 666 (1170)
Q Consensus 655 ~eiL~~~~~~~~ 666 (1170)
+++|+||||++.
T Consensus 265 ~eil~h~~~~~~ 276 (277)
T d1phka_ 265 EEALAHPFFQQY 276 (277)
T ss_dssp HHHTTSGGGCTT
T ss_pred HHHHcCHHHHHh
Confidence 999999999864
|
| >d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: cAMP-dependent PK, catalytic subunit species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=6e-48 Score=444.72 Aligned_cols=256 Identities=27% Similarity=0.404 Sum_probs=221.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||+++.... .....+.+.+|+.+|+.++|||||+++++|..
T Consensus 40 ld~y~i~~~lG~G~fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~------- 112 (350)
T d1rdqe_ 40 LDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKD------- 112 (350)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEEC-------
T ss_pred ccCeEEEEEeecCcCcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccccc-------
Confidence 5899999999999999999999999999999999974321 12234678999999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||. |+|...+...+.+++..++.++.||+.||.|||+
T Consensus 113 ---------------------------------~~~~~~v~e~~~~g~l~~~l~~~~~l~e~~~~~i~~qi~~aL~yLH~ 159 (350)
T d1rdqe_ 113 ---------------------------------NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHS 159 (350)
T ss_dssp ---------------------------------SSEEEEEEECCTTCBHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccccccccccccccchhhhHhhcCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 457899999996 5899999988899999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|||||||||+|||++.++++||+|||+|+.+... ..+.+||+.|||||++.+ ..|+.++|
T Consensus 160 ~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~------------------~~~~~Gt~~Y~APE~~~~-~~~~~~~D 220 (350)
T d1rdqe_ 160 LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR------------------TWTLCGTPEALAPEIILS-KGYNKAVD 220 (350)
T ss_dssp TTEECCCCSGGGEEECTTSCEEECCCTTCEECSSC------------------BCCCEECGGGCCHHHHTT-CCBCTHHH
T ss_pred CCEecCcCCHHHcccCCCCCEEeeeceeeeecccc------------------cccccCccccCCHHHHcC-CCCCcccc
Confidence 99999999999999999999999999999865311 234689999999999998 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHHHHHhccCC
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SATELLQDALP 663 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~eiL~~~~~ 663 (1170)
||||||++|||++ ||...........+......+| ...++++.+||++||+.||.+|+ |++++++||||
T Consensus 221 iwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p---~~~s~~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f 297 (350)
T d1rdqe_ 221 WWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP---SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWF 297 (350)
T ss_dssp HHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGG
T ss_pred ccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC---ccCCHHHHHHHHHHhhhCHHhccccccccHHHHHcCccc
Confidence 9999999999997 8887776666666555444444 35678999999999999999994 99999999999
Q ss_pred CCchHHHH
Q 001059 664 PQMEYELL 671 (1170)
Q Consensus 664 ~~~~~~~~ 671 (1170)
....+..+
T Consensus 298 ~~~~~~~~ 305 (350)
T d1rdqe_ 298 ATTDWIAI 305 (350)
T ss_dssp TTCCHHHH
T ss_pred cCCCHHHH
Confidence 99876644
|
| >d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: G-protein coupled receptor kinase 2 species: Cow (Bos taurus) [TaxId: 9913]
Probab=100.00 E-value=9.6e-48 Score=445.32 Aligned_cols=261 Identities=25% Similarity=0.346 Sum_probs=211.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh-hhHHHHH---HHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL-PVNDRIL---REVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~-~~~~~~~---~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||++....... .....+. +|+.+++.++|||||+++++|.+
T Consensus 3 lddy~i~~~lG~G~fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~~~---- 78 (364)
T d1omwa3 3 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHT---- 78 (364)
T ss_dssp STTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEEC----
T ss_pred HHhCeeeeEEecCCCeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEEEE----
Confidence 689999999999999999999999999999999996432111 1122233 44677777789999999998843
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+++.....+++..++.++.||+.||+|
T Consensus 79 ------------------------------------~~~~~ivmE~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~y 122 (364)
T d1omwa3 79 ------------------------------------PDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEH 122 (364)
T ss_dssp ------------------------------------SSEEEEEECCCCSCBHHHHHHHHCSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCEEEEEEEecCCCcHHHHHHhcccccHHHHHHHHHHHHHHHHH
Confidence 457899999997 6999999998999999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|||||||||+|||++.++.+||+|||+|+.+... .....+||+.|||||++.+...|+.
T Consensus 123 lH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~-----------------~~~~~~GT~~y~APE~~~~~~~~~~ 185 (364)
T d1omwa3 123 MHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKK-----------------KPHASVGTHGYMAPEVLQKGVAYDS 185 (364)
T ss_dssp HHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSS-----------------CCCSCCSCGGGCCHHHHSTTCCCCT
T ss_pred HHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCC-----------------cccccccccccchhHHhhcCCCCCc
Confidence 99999999999999999999999999999999865321 1234589999999999976466899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCC-----HHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPS-----ATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPt-----a~eiL~~ 660 (1170)
++|||||||+||||++ ||...................+..+...++++++||.+||+.||.+||| ++++++|
T Consensus 186 ~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~~~a~eil~H 265 (364)
T d1omwa3 186 SADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKES 265 (364)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSCSSCSSCHHHHHHHSSSCCCCCCSSSCHHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTS
T ss_pred ccchhHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCCCCCCCCCCHHHHHHHHHHcccCHHHhCCCcccCHHHHHcC
Confidence 9999999999999997 8865432211111111112222334467889999999999999999999 8999999
Q ss_pred cCCCCchHHHH
Q 001059 661 ALPPQMEYELL 671 (1170)
Q Consensus 661 ~~~~~~~~~~~ 671 (1170)
|||.+..+..+
T Consensus 266 p~f~~i~~~~~ 276 (364)
T d1omwa3 266 PFFRSLDWQMV 276 (364)
T ss_dssp GGGTTCCHHHH
T ss_pred ccccCCCHHHH
Confidence 99999887644
|
| >d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.3e-47 Score=427.65 Aligned_cols=259 Identities=27% Similarity=0.460 Sum_probs=211.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|+++++||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|++++|||||+++++|.+
T Consensus 1 ~d~Y~~~~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~~~-------- 72 (298)
T d1gz8a_ 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHT-------- 72 (298)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEEEE--------
T ss_pred CCCCEeccEEecCcCeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccccc--------
Confidence 479999999999999999999999999999999997654443445689999999999999999999999843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
...+|+|||||++++.+.+.. ...+++..++.++.||+.||+|||+
T Consensus 73 --------------------------------~~~~~iv~e~~~~~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~ 120 (298)
T d1gz8a_ 73 --------------------------------ENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHS 120 (298)
T ss_dssp --------------------------------TTEEEEEEECCSEEHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------ccceeEEEeecCCchhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhc
Confidence 457899999999887776643 4569999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+|||||||||+|||++.++.+||+|||+|+...... ......+||+.|+|||++.....++.++|
T Consensus 121 ~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~gt~~y~apE~~~~~~~~~~~~D 185 (298)
T d1gz8a_ 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV---------------RTYTHEVVTLWYRAPEILLGCKYYSTAVD 185 (298)
T ss_dssp TTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCS---------------BCTTCCBCCCTTCCHHHHTTCSSCCTHHH
T ss_pred CCEEccccCchheeecccCcceeccCCcceeccCCc---------------ccceeecccceeeehhhhccccCCCcccc
Confidence 999999999999999999999999999998753221 11244589999999999887666789999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC--------------------------CccccCCHHHHHHHHH
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP--------------------------PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p--------------------------~~~~~~~~e~~~LI~~ 642 (1170)
||||||++|+|++ ||...........+....+... ......++++++||++
T Consensus 186 iwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~ 265 (298)
T d1gz8a_ 186 IWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQ 265 (298)
T ss_dssp HHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred ccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccccccccccccccccccccchhhhccCCCHHHHHHHHH
Confidence 9999999999997 8877665555444332211110 0122456789999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCch
Q 001059 643 LMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
||+.||.+|||+.|+|+||||+...
T Consensus 266 mL~~dP~~R~t~~ell~H~ff~~~~ 290 (298)
T d1gz8a_ 266 MLHYDPNKRISAKAALAHPFFQDVT 290 (298)
T ss_dssp HTCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HccCChhHCcCHHHHhCCHhhccCC
Confidence 9999999999999999999998653
|
| >d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase C, theta type species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.1e-47 Score=433.50 Aligned_cols=258 Identities=28% Similarity=0.403 Sum_probs=218.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHH-hccCCCceeEEEEEeecCcccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLS-RLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~-~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
+++|++++.||+|+||+||+|+++.+|+.||||+++.... .......+.+|..++. .++|||||+++++|.+
T Consensus 1 iddy~i~~~iG~G~fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~~~------ 74 (320)
T d1xjda_ 1 IEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQT------ 74 (320)
T ss_dssp CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEEC------
T ss_pred CCCeEEeeEEecCCCcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEEcc------
Confidence 4789999999999999999999999999999999974321 1122455677777765 6899999999999843
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|||||||+ |+|.+++.....+++.+++.++.||+.||+|||
T Consensus 75 ----------------------------------~~~~yivmEy~~~g~L~~~i~~~~~~~e~~~~~~~~qi~~al~ylH 120 (320)
T d1xjda_ 75 ----------------------------------KENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLH 120 (320)
T ss_dssp ----------------------------------SSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------CCceeEEEeecCCCcHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999997 599999999999999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++++||+|||+|+...... ...+..+||+.|+|||++.+ ..|+.++
T Consensus 121 ~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~-~~~~~~~ 184 (320)
T d1xjda_ 121 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGD---------------AKTNTFCGTPDYIAPEILLG-QKYNHSV 184 (320)
T ss_dssp HTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---------------CCBCCCCSCGGGCCHHHHTT-CCBCTHH
T ss_pred hCCeeeccCcccceeecCCCceeccccchhhhccccc---------------ccccccCCCCCcCCHHHHcC-CCCCchh
Confidence 9999999999999999999999999999998643211 12345689999999999998 5799999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHH-HHHhccCCCCc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSAT-ELLQDALPPQM 666 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~-eiL~~~~~~~~ 666 (1170)
|||||||++|||++ ||.+....+....+......+| ...++++++||++||+.||.+|||+. ++++||||.+.
T Consensus 185 DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p---~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~ 261 (320)
T d1xjda_ 185 DWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP---RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI 261 (320)
T ss_dssp HHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC---TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred hhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC---ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence 99999999999996 8987777666655555444343 35678999999999999999999995 89999999988
Q ss_pred hHHH
Q 001059 667 EYEL 670 (1170)
Q Consensus 667 ~~~~ 670 (1170)
.++.
T Consensus 262 ~~~~ 265 (320)
T d1xjda_ 262 NWEE 265 (320)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 7653
|
| >d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 7, CDK7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4e-47 Score=428.69 Aligned_cols=255 Identities=26% Similarity=0.354 Sum_probs=202.8
Q ss_pred eEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh---hhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 358 EELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL---PVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 358 ~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~---~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
+.+++||+|+||+||+|+++.+|+.||||+++...... .....+.+|+.+|+.++|||||+++++|..
T Consensus 1 E~l~~lG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~~~--------- 71 (299)
T d1ua2a_ 1 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGH--------- 71 (299)
T ss_dssp CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECC---------
T ss_pred CcceEeccCcCeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeeecc---------
Confidence 35789999999999999999999999999997543321 123568899999999999999999998833
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHH-HHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQ-VFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~-~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
..++|+|||||++++.. +......+++..++.++.||+.||+|||++|
T Consensus 72 -------------------------------~~~~~ivmE~~~~~~~~~~~~~~~~l~~~~~~~~~~qil~aL~~lH~~~ 120 (299)
T d1ua2a_ 72 -------------------------------KSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHW 120 (299)
T ss_dssp -------------------------------TTCCEEEEECCSEEHHHHHTTCCSSCCSSHHHHHHHHHHHHHHHHHHTT
T ss_pred -------------------------------CCceeehhhhhcchHHhhhhhcccCCCHHHHHHHHHHHHHHHHHhhccc
Confidence 34679999999875554 4445567999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+||+|||+|+...... ....+.+||+.|||||++.+...|+.++|||
T Consensus 121 iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~---------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw 185 (299)
T d1ua2a_ 121 ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPN---------------RAYTHQVVTRWYRAPELLFGARMYGVGVDMW 185 (299)
T ss_dssp CCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCC---------------CCCCCSCCCCTTCCHHHHTTCSCCCHHHHHH
T ss_pred eecccCCcceEEecCCCccccccCccccccCCCc---------------ccccceecChhhccHHHHccCCCCChhhhhh
Confidence 9999999999999999999999999998653221 1123468999999999988756789999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC--------------------CC-----ccccCCHHHHHHHHHccC
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--------------------PP-----SWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~--------------------p~-----~~~~~~~e~~~LI~~~L~ 645 (1170)
||||++|||++ ||....+.+....+....+.. +. .+...++++.+||++||+
T Consensus 186 SlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~ 265 (299)
T d1ua2a_ 186 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFL 265 (299)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHC
T ss_pred hcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccchhccchhhhhccCCCCChHHhcccCCHHHHHHHHHHcc
Confidence 99999999997 776666555544433221110 00 112456789999999999
Q ss_pred CCCCCCCCHHHHHhccCCCCch
Q 001059 646 PSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 646 ~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.||++|||++|+|+||||....
T Consensus 266 ~dP~~R~sa~e~L~Hp~f~~~p 287 (299)
T d1ua2a_ 266 FNPCARITATQALKMKYFSNRP 287 (299)
T ss_dssp SSTTTSCCHHHHHTSGGGTSSS
T ss_pred CChhhCcCHHHHhCCHhhCCCC
Confidence 9999999999999999998653
|
| >d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Titin, kinase domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-47 Score=432.12 Aligned_cols=254 Identities=23% Similarity=0.354 Sum_probs=218.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
..++|++++.||+|+||+||+|+++.+|+.||||+++... .....+.+|+.+|+.++|||||+++++|.+
T Consensus 3 ~~~rY~i~~~lG~G~fg~Vy~~~~~~~~~~~AiK~i~~~~---~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~------- 72 (321)
T d1tkia_ 3 LYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG---TDQVLVKKEISILNIARHRNILHLHESFES------- 72 (321)
T ss_dssp CTTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT---HHHHHHHHHHHHHHHSCCTTBCCEEEEEEE-------
T ss_pred CccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEcCCc---ccHHHHHHHHHHHHhCCCCCCCeEEEEEEE-------
Confidence 4578999999999999999999999999999999997542 234568899999999999999999998843
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
..++|+|||||+ |+|.+++...+ .+++.+++.++.||+.||+|||
T Consensus 73 ---------------------------------~~~~~lvmE~~~gg~L~~~i~~~~~~l~e~~~~~i~~qi~~al~yLH 119 (321)
T d1tkia_ 73 ---------------------------------MEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLH 119 (321)
T ss_dssp ---------------------------------TTEEEEEECCCCCCBHHHHHTSSSCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCEEEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 467899999997 59999998665 6999999999999999999999
Q ss_pred hCCccccCCCCCceeecCC--CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 511 GQGIIHRDLTPNNIFFDAR--NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~--~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
++||+||||||+|||++.+ +.+||+|||+++...... .....+||+.|+|||.+.+ ..|+.
T Consensus 120 ~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~----------------~~~~~~~t~~y~ape~~~~-~~~~~ 182 (321)
T d1tkia_ 120 SHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGD----------------NFRLLFTAPEYYAPEVHQH-DVVST 182 (321)
T ss_dssp HTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTC----------------EEEEEESCGGGSCHHHHTT-CEECH
T ss_pred HcCCCcccccccceeecCCCceEEEEcccchhhccccCC----------------cccccccccccccchhccC-CCCCc
Confidence 9999999999999999854 589999999998653211 1234579999999999987 56899
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCC
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPP 664 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~ 664 (1170)
++|||||||++|+|++ ||......+....+......++. .+...++++++||++||..||.+|||++++++|||+.
T Consensus 183 ~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~ 262 (321)
T d1tkia_ 183 ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLK 262 (321)
T ss_dssp HHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHH
T ss_pred hhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhc
Confidence 9999999999999997 88887777777666665555543 4456788999999999999999999999999999986
Q ss_pred Cc
Q 001059 665 QM 666 (1170)
Q Consensus 665 ~~ 666 (1170)
+.
T Consensus 263 ~~ 264 (321)
T d1tkia_ 263 QK 264 (321)
T ss_dssp SC
T ss_pred cC
Confidence 54
|
| >d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Abelsone tyrosine kinase (abl) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.8e-47 Score=423.88 Aligned_cols=247 Identities=22% Similarity=0.290 Sum_probs=206.4
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.++||+|+||+||+|+++.+|+.||||+++.... ..+++.+|+.+|++++|||||+++++|.+
T Consensus 16 ~~~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~---~~~~~~~E~~il~~l~HpnIv~~~~~~~~-------- 84 (287)
T d1opja_ 16 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM---EVEEFLKEAAVMKEIKHPNLVQLLGVCTR-------- 84 (287)
T ss_dssp GGGEEEEEETTTTTTSSEEEEEEGGGTEEEEEEECCTTCS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred HHHeEEeeEEeeCCCeEEEEEEECCCCeEEEEEEECCccc---hHHHHHHHHHHHHhCCCCCEecCCccEee--------
Confidence 3689999999999999999999999999999999874433 35679999999999999999999999843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|++||||+ |+|.+++... ..+++..++.++.||+.||+|||
T Consensus 85 --------------------------------~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH 132 (287)
T d1opja_ 85 --------------------------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLE 132 (287)
T ss_dssp --------------------------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHH
Confidence 345799999997 6999988654 46899999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.+||+|||+|+...... ....+...||+.|||||++.+ ..|+.++
T Consensus 133 ~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~--------------~~~~~~~~g~~~y~aPE~~~~-~~~~~k~ 197 (287)
T d1opja_ 133 KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT--------------YTAHAGAKFPIKWTAPESLAY-NKFSIKS 197 (287)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSS--------------SEEETTEEECGGGCCHHHHHH-CCCSHHH
T ss_pred HCCcccCccccCeEEECCCCcEEEccccceeecCCCC--------------ceeeccccccccccChHHHcC-CCCCchh
Confidence 9999999999999999999999999999998653221 111234568999999999987 5799999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|||++ ||....+.......+. .+..++.+...++++.+||.+||+.||.+|||+.++++
T Consensus 198 DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~ 268 (287)
T d1opja_ 198 DVWAFGVLLWEIATYGMSPYPGIDLSQVYELLE-KDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268 (287)
T ss_dssp HHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHh-cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 99999999999996 5555444444444443 33344455567889999999999999999999999986
|
| >d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: B-Raf kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.7e-47 Score=421.47 Aligned_cols=249 Identities=24% Similarity=0.353 Sum_probs=201.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||+||+|+++ ..||||+++....+....+.+.+|+.+|++++|||||++++++.
T Consensus 8 ~~~~~~~~lG~G~fg~Vy~~~~~---~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~~---------- 74 (276)
T d1uwha_ 8 GQITVGQRIGSGSFGTVYKGKWH---GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST---------- 74 (276)
T ss_dssp TCCCCCSEEEECSSCEEEEEESS---SEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEEC----------
T ss_pred ccEEEEEEEeeCCCcEEEEEEEC---CEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEEe----------
Confidence 67899999999999999999864 35999999876666666788999999999999999999998762
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ |+|.+++... ..+++..+..++.||+.||+|||++
T Consensus 75 -------------------------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~gl~yLH~~ 123 (276)
T d1uwha_ 75 -------------------------------APQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAK 123 (276)
T ss_dssp -------------------------------SSSCEEEEECCCEEEHHHHHHTSCCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------ccEEEEEEecCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence 234689999997 6999999754 5699999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC--CCCCccc
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW--PKIDEKA 590 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~--~~~~~ks 590 (1170)
|||||||||+|||++.++++||+|||+|+....... ....++..||+.|||||++.+. ..|+.++
T Consensus 124 ~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~-------------~~~~~~~~gt~~y~APE~l~~~~~~~~~~~s 190 (276)
T d1uwha_ 124 SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSG-------------SHQFEQLSGSILWMAPEVIRMQDKNPYSFQS 190 (276)
T ss_dssp TCCCSCCCGGGEEEETTSSEEECCCCCSCC-------------------------CCCCGGGCCHHHHTTCSSCCCCHHH
T ss_pred CEeccccCHHHEEEcCCCCEEEccccceeeccccCC-------------cccccccccCcccCCHHHHhcccCCCCCchh
Confidence 999999999999999999999999999986532210 1122456899999999998753 3489999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC---CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP---PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p---~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||+||||+| ||............+......| .....+++++.+||.+||+.||++|||+.+|+++
T Consensus 191 DiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~ 266 (276)
T d1uwha_ 191 DVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS 266 (276)
T ss_dssp HHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGGGSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcchhccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 99999999999997 8876655544444444332222 2334567899999999999999999999999986
|
| >d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase Itk/Tsk species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-46 Score=414.62 Aligned_cols=246 Identities=22% Similarity=0.369 Sum_probs=193.2
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||+||+|+++ +++.||||+++.... ..+++.+|+.++++++|||||+++++|.+
T Consensus 5 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~--------- 71 (263)
T d1sm2a_ 5 SELTFVQEIGSGQFGLVHLGYWL-NKDKVAIKTIREGAM---SEEDFIEEAEVMMKLSHPKLVQLYGVCLE--------- 71 (263)
T ss_dssp SCEEEEEEEECCSSCCEEEEEET-TTEEEEEEECCSSSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS---------
T ss_pred HHcEEEEEEeeCCCeEEEEEEEC-CCCEEEEEEECCCcC---cHHHHHHHHHHHHhcCCCCcccccceecc---------
Confidence 58999999999999999999987 678899999875433 24679999999999999999999999843
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ |+|.+++... ..+++..++.++.||+.||+|||++
T Consensus 72 -------------------------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~i~~qia~gl~~lH~~ 120 (263)
T d1sm2a_ 72 -------------------------------QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120 (263)
T ss_dssp -------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCceEEEEEecCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence 245699999996 6999988654 5689999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
+|+||||||+|||++.++.+||+|||+|+....... .......||+.|||||++.+ ..|+.++||
T Consensus 121 ~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~--------------~~~~~~~gt~~y~aPE~l~~-~~~~~k~DV 185 (263)
T d1sm2a_ 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQY--------------TSSTGTKFPVKWASPEVFSF-SRYSSKSDV 185 (263)
T ss_dssp TCCCTTCSGGGEEECGGGCEEECSCC--------------------------------CTTSCCHHHHTT-CCCCHHHHH
T ss_pred ceeecccchhheeecCCCCeEecccchheeccCCCc--------------eeecceecCcccCChHHhcC-CCCCchhhh
Confidence 999999999999999999999999999987542211 11234579999999999998 579999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||++|||+| |+............+. .+..+..+...++++.+||.+||+.||++|||+++|+++
T Consensus 186 wS~Gvil~el~t~~~~~~~~~~~~~~~~~i~-~~~~~~~p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~ 255 (263)
T d1sm2a_ 186 WSFGVLMWEVFSEGKIPYENRSNSEVVEDIS-TGFRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ 255 (263)
T ss_dssp HHHHHHHHHHHTTSCCTTCSCCHHHHHHHHH-HTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cchHHHHHHHHHCCCCCCCCCCHHHHHHHHH-hcCCCCCccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 999999999996 4433333333333333 233333344567899999999999999999999999986
|
| >d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Lymphocyte kinase (lck) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.5e-46 Score=418.40 Aligned_cols=244 Identities=27% Similarity=0.354 Sum_probs=200.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||+||+|+++ +++.||||+++.... ..+.+.+|+.+|++++|||||++++++.+
T Consensus 13 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~~~~~~~---~~~~~~~E~~~l~~l~HpnIv~~~g~~~~--------- 79 (272)
T d1qpca_ 13 ETLKLVERLGAGQFGEVWMGYYN-GHTKVAVKSLKQGSM---SPDAFLAEANLMKQLQHQRLVRLYAVVTQ--------- 79 (272)
T ss_dssp GGEEEEEEEEEETTEEEEEEEET-TTEEEEEEEECTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS---------
T ss_pred HHeEEeEEEecCCCcEEEEEEEC-CCCEEEEEEEccCcC---CHHHHHHHHHHHHhCCCCCEeEEEeeecc---------
Confidence 68999999999999999999987 678999999975433 34679999999999999999999997622
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
..+|+|||||+ |+|.+++... ..+++..++.++.||++||+|||+
T Consensus 80 --------------------------------~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~ 127 (272)
T d1qpca_ 80 --------------------------------EPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEE 127 (272)
T ss_dssp --------------------------------SSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 23589999997 6898877543 359999999999999999999999
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccch
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKAD 591 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksD 591 (1170)
+||+||||||+||||+.++.+||+|||+|+.+.... ....+...||+.|||||++.+ ..|+.++|
T Consensus 128 ~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~--------------~~~~~~~~gt~~y~APE~~~~-~~~~~~sD 192 (272)
T d1qpca_ 128 RNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNE--------------YTAREGAKFPIKWTAPEAINY-GTFTIKSD 192 (272)
T ss_dssp TTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSC--------------EECCTTCCCCTTTSCHHHHHH-CEECHHHH
T ss_pred CCcccCccchhheeeecccceeeccccceEEccCCc--------------cccccccCCcccccChHHHhC-CCCCchhh
Confidence 999999999999999999999999999998753221 112244579999999999987 56899999
Q ss_pred hHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 592 MYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 592 IwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
||||||++|||+| |+............+. .+..++.....++++.+||.+||+.||++|||++++++
T Consensus 193 vwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~-~~~~~~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~ 262 (272)
T d1qpca_ 193 VWSFGILLTEIVTHGRIPYPGMTNPEVIQNLE-RGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLRS 262 (272)
T ss_dssp HHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred hhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHH-hcCCCCCcccChHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9999999999997 4444433333333333 33344444567789999999999999999999999987
|
| >d1h4vb2 d.104.1.1 (B:2-325) Histidyl-tRNA synthetase (HisRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Thermus thermophilus [TaxId: 274]
Probab=100.00 E-value=1.6e-46 Score=428.68 Aligned_cols=298 Identities=14% Similarity=0.143 Sum_probs=214.4
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Cc---ccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.++|++|++|.++..+++++++++++|++|||++|+||+| .+..+ |. ...+.||+|.|.+|+.++||||+|
T Consensus 3 ~~~kG~rD~~p~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~l~~~~g~~~~~~~~~~~~~~d~~g~~l~LRpD~T 82 (324)
T d1h4vb2 3 RAVRGTKDLFGKELRMHQRIVATARKVLEAAGALELVTPIFEETQVFEKGVGAATDIVRKEMFTFQDRGGRSLTLRPEGT 82 (324)
T ss_dssp CCCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEEGGGGCCCSCC------CCSCEEECTTSCEEEECCCSH
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHcCCeEeeCCccccHHHhhcccCCchhHHHHHHhhhhccCCcccccccccc
Confidence 45789999999999999999999999999999999999999 33333 33 257899999999999999999999
Q ss_pred HHHHHHHHhCC----CCceeEEEecCeEEcCCCCCC-CCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEE
Q 001059 785 LPFIRWAISNQ----KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIH 859 (1170)
Q Consensus 785 ~~iaR~~~~~~----~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~ 859 (1170)
+|+||+++.++ ..|+|+||+|+|||+++++.+ .+||+|+|+|+||.++..+|+|+|.++.++++.+|+.+ +.+.
T Consensus 83 ~~iar~~~~~~~~~~~~p~r~~Y~g~VfR~~~~~~gr~re~~Q~g~EiiG~~~~~ad~Eii~l~~~~l~~l~~~~-~~~~ 161 (324)
T d1h4vb2 83 AAMVRAYLEHGMKVWPQPVRLWMAGPMFRAERPQKGRYRQFHQVNYEALGSENPILDAEAVVLLYECLKELGLRR-LKVK 161 (324)
T ss_dssp HHHHHHHHHTTGGGSSSSEEEEEEEEEECCCCC----CCEEEEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCS-CEEE
T ss_pred cHHHHHHHHhhhhhhchhhhheeeCcccccCcccCCCcceeccccccccCCCChHHHHHHHHHHHHHHHHhcccC-ccee
Confidence 99999887643 469999999999999888755 46799999999999999999999999999999999986 9999
Q ss_pred eCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCc--HHHHHHHHHHHHHhcCChh
Q 001059 860 LNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAAD 937 (1170)
Q Consensus 860 lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~~ 937 (1170)
|+|.+++..+....++..+... .... .... +....+ .+..+. ....+....++......
T Consensus 162 i~~~~~~~~~~~~~~~~~~~~~-------~~~~--------~~~~-~~~~~l-~~~~~~~~~~~~~~~~~ll~~~~~~-- 222 (324)
T d1h4vb2 162 LSSVGDPEDRARYNAYLREVLS-------PHRE--------ALSE-DSKERL-EENPMRILDSKSERDQALLKELGVR-- 222 (324)
T ss_dssp EEECCCHHHHHHHHHHHHHHHG-------GGGG--------GSCH-HHHHHH-HHCGGGGGGCCCHHHHHHHHHHCCC--
T ss_pred eeccCchhHHHHHHHHHHHHHH-------HHHH--------hhhH-HHHHHH-HhhhhhhhhhhhHHHHHHHHhhcCc--
Confidence 9998887776655443222111 1100 0000 000111 111100 00011111121111111
Q ss_pred hHHHHHhccCCCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccc
Q 001059 938 QALPRLRGALPADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYD 1015 (1170)
Q Consensus 938 ~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD 1015 (1170)
..++ ..+......++++ .++.+++ .+.||++++||++||||+||++|+.+.+. ..+||+|||||
T Consensus 223 ~~~~------~l~~~~~~~~~~~~~~~~~l~~--~i~iD~~~~rg~~YYtG~vFe~~~~~~g~------~~~i~~GGRYD 288 (324)
T d1h4vb2 223 PMLD------FLGEEARAHLKEVERHLERLSV--PYELEPALVRGLDYYVRTAFEVHHEEIGA------QSALGGGGRYD 288 (324)
T ss_dssp CGGG------GCCHHHHHHHHHHHHHHHHTTC--CEEECTTCCCCSTTCEEEEEEEEC------------CEEEEEEECT
T ss_pred hHHH------HHhHHHHHHHHHHHHHHhhcce--EEEEccccccCCccccCeEEEEEECCCCc------cCeeecCCccH
Confidence 0000 1244556666666 5666666 69999999999999999999999876432 24799999999
Q ss_pred hhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC
Q 001059 1016 YLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV 1054 (1170)
Q Consensus 1016 ~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~ 1054 (1170)
+|+++||++ ++||||||+++|||+.+|+.
T Consensus 289 ~L~~~f~~~----------~~pAvGfsi~ld~l~~~l~~ 317 (324)
T d1h4vb2 289 GLSELLGGP----------RVPGVGFAFGVERVALALEA 317 (324)
T ss_dssp THHHHTTCC----------CCCEEEEEEEHHHHHHHHHH
T ss_pred HHHHhcCCC----------CCCeEEEEeeHHHHHHHHHh
Confidence 999999654 36999999999999999873
|
| >d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK2 species: (Plasmodium falciparum) [TaxId: 5833]
Probab=100.00 E-value=5.4e-46 Score=416.67 Aligned_cols=256 Identities=25% Similarity=0.447 Sum_probs=208.9
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|+++++||+|+||+||+|+++ +|+.||||+++.........+++.+|+.+|++++|||||+++++|..
T Consensus 1 ~~~Y~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~-------- 71 (286)
T d1ob3a_ 1 MEKYHGLEKIGEGTYGVVYKAQNN-YGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHT-------- 71 (286)
T ss_dssp CCSEEEEEEEEEETTEEEEEEEET-TSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEEC--------
T ss_pred CCCceeccEEecCCCcEEEEEEeC-CCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeeccc--------
Confidence 478999999999999999999997 88999999997655444446789999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l-~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|++|||+.+++...+ ...+.+++..++.++.||+.||+|||++
T Consensus 72 --------------------------------~~~~~i~~e~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~ 119 (286)
T d1ob3a_ 72 --------------------------------KKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDR 119 (286)
T ss_dssp --------------------------------SSCEEEEEECCSEEHHHHHHTSTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------CCceeEEEEeehhhhHHHHHhhcCCcchhhhHHHHHHHHHHHHHhccC
Confidence 3567999999987655555 5567799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
|||||||||+|||++.++.+||+|||+|....... ......+||+.|+|||.+.+...++.++||
T Consensus 120 ~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~---------------~~~~~~~~~~~y~~pE~~~~~~~~~~~~Di 184 (286)
T d1ob3a_ 120 RVLHRDLKPQNLLINREGELKIADFGLARAFGIPV---------------RKYTHEIVTLWYRAPDVLMGSKKYSTTIDI 184 (286)
T ss_dssp TCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC------------------------CCCTTCCHHHHTTCCSCCTHHHH
T ss_pred cEEecCCCCceeeEcCCCCEEecccccceecccCc---------------cccceecccchhhhHHHHhCCCCCCcceee
Confidence 99999999999999999999999999998764321 112345799999999999876678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC--------------------------CCccccCCHHHHHHHHHc
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL--------------------------PPSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~--------------------------p~~~~~~~~e~~~LI~~~ 643 (1170)
|||||++|||++ ||....+.+....+....+.. +......++++.+||++|
T Consensus 185 wslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~ 264 (286)
T d1ob3a_ 185 WSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKM 264 (286)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHH
T ss_pred hhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccchhhhhhcccccccccCcchhhhcccCCHHHHHHHHHH
Confidence 999999999997 887665555444433211110 011234567899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCC
Q 001059 644 MSPSPSDRPSATELLQDALPPQ 665 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~ 665 (1170)
|+.||++|||+.|+|+||||++
T Consensus 265 L~~dP~~R~s~~ell~Hp~f~~ 286 (286)
T d1ob3a_ 265 LKLDPNQRITAKQALEHAYFKE 286 (286)
T ss_dssp TCSSTTTSCCHHHHHTSGGGGC
T ss_pred ccCChhHCcCHHHHhcCcccCc
Confidence 9999999999999999999874
|
| >d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: ephb2 receptor tyrosine kinase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=7.2e-46 Score=418.43 Aligned_cols=253 Identities=23% Similarity=0.327 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCc---EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGR---HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~---~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
.++|++.+.||+|+||+||+|+++.+|+ .||||++... .+....+.|.+|+.+|++++|||||+++++|.+
T Consensus 25 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~----- 98 (299)
T d1jpaa_ 25 ISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSG-YTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTK----- 98 (299)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECC---CCEEEEEEECCSS-CCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-----
T ss_pred hhhcEEeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEECcc-cCHHHHHHHHHHHHHHHhCCCCCCccEEEEEee-----
Confidence 4679999999999999999999987765 5888887633 344456789999999999999999999999843
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+|+|||||+ |+|.+++... +.+++.+++.++.||++||+|
T Consensus 99 -----------------------------------~~~~~iv~Ey~~~g~L~~~~~~~~~~l~~~~~~~i~~qia~gl~y 143 (299)
T d1jpaa_ 99 -----------------------------------STPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMKY 143 (299)
T ss_dssp -----------------------------------SSSCEEEEECCTTEEHHHHHHTTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCEEEEEEEecCCCcceeeeccccCCCCHHHHHHHHHHHHHHHHH
Confidence 345799999997 5899888764 469999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++||+||||||+|||++.++++||+|||+|+.+....... .........||+.|||||++.+ ..|+.
T Consensus 144 LH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~----------~~~~~~~~~~t~~y~aPE~~~~-~~~~~ 212 (299)
T d1jpaa_ 144 LADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDP----------TYTSALGGKIPIRWTAPEAIQY-RKFTS 212 (299)
T ss_dssp HHHTTCCCSCCCGGGEEECTTCCEEECCC---------------------------------CGGGSCHHHHHS-CCCCH
T ss_pred HhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcc----------eeeecccccCCccccCHHHHhc-CCCCc
Confidence 999999999999999999999999999999998764322110 0111234568999999999987 57999
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||+||||+| ||......+....+. .+..++....+++++.+||.+||+.||++|||+.+|+++
T Consensus 213 ~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~ 286 (299)
T d1jpaa_ 213 ASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIE--QDYRLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT 286 (299)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred ccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 9999999999999986 777666655544333 233344455678899999999999999999999999875
|
| >d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-45 Score=417.62 Aligned_cols=263 Identities=25% Similarity=0.381 Sum_probs=209.7
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccC-CcEEEEEEEecCCCChhhHHHHHHHHHHHHhc---cCCCceeEEEEEeecCc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLD-GRHYAVKKIRLKDKSLPVNDRILREVATLSRL---QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~t-g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l---~HpnIV~l~~~~~e~~~ 428 (1170)
..++|+++++||+|+||+||+|++..+ ++.||||+++...........+.+|+.+|+.+ +||||++++++|....
T Consensus 5 ~~~~Y~i~~~LG~G~fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~~- 83 (305)
T d1blxa_ 5 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR- 83 (305)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEE-
T ss_pred CcCCEEEEEEEecccCeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeecccc-
Confidence 357999999999999999999999765 66799999976544333344567888887766 7999999999985421
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH--hcCCCCHHHHHHHHHHHHHHH
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE--SYDHFDKELAWHLFRQIVEGL 506 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~--~~~~l~e~~~~~i~~qI~~gL 506 (1170)
.....++|++||||++++..... ....+++..++.++.||+.||
T Consensus 84 ----------------------------------~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL 129 (305)
T d1blxa_ 84 ----------------------------------TDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQLLRGL 129 (305)
T ss_dssp ----------------------------------CSSEEEEEEEEECCSCBHHHHHHHSCTTCSCHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cccCceEEEEEEeccCCchhhhhhccCCCCCHHHHHHHHHHHHHHH
Confidence 01346789999999886555443 345699999999999999999
Q ss_pred HHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCC
Q 001059 507 AHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKI 586 (1170)
Q Consensus 507 ~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~ 586 (1170)
+|||++|||||||||+|||++.++.+||+|||+++...... .....+||+.|||||++.+ ..|
T Consensus 130 ~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~----------------~~~~~~gT~~Y~APE~~~~-~~y 192 (305)
T d1blxa_ 130 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQM----------------ALTSVVVTLWYRAPEVLLQ-SSY 192 (305)
T ss_dssp HHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGG----------------GGCCCCCCCTTCCHHHHTT-CCC
T ss_pred HHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccc----------------cCCCcccChhhcCcchhcC-CCC
Confidence 99999999999999999999999999999999998643221 1245689999999999988 579
Q ss_pred CccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC------------------------CCccccCCHHHHHH
Q 001059 587 DEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL------------------------PPSWVAKFSEQESL 639 (1170)
Q Consensus 587 ~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~------------------------p~~~~~~~~e~~~L 639 (1170)
+.++||||+||++|||++ ||......+....+....+.. +......++.+.+|
T Consensus 193 ~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dl 272 (305)
T d1blxa_ 193 ATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDL 272 (305)
T ss_dssp CTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHH
T ss_pred ChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccchhhhhccccccchhhccccCCHHHHHH
Confidence 999999999999999997 887766655544433221110 01223456789999
Q ss_pred HHHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 640 LRRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 640 I~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|++||+.||.+|||++|+|+||||+...
T Consensus 273 i~~mL~~dP~~R~sa~e~L~Hpff~~i~ 300 (305)
T d1blxa_ 273 LLKCLTFNPAKRISAYSALSHPYFQDLE 300 (305)
T ss_dssp HHHHSCSSTTTSCCHHHHHTSGGGTTCC
T ss_pred HHHHCcCChhHCcCHHHHhcChhhcCch
Confidence 9999999999999999999999998763
|
| >d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase SYK species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.1e-46 Score=415.81 Aligned_cols=243 Identities=22% Similarity=0.295 Sum_probs=197.4
Q ss_pred eeeccCCcEEEEEEEEcc--CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCCCC
Q 001059 361 QPLGHGGFGHVVLCKNKL--DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSMWG 438 (1170)
Q Consensus 361 ~~LG~G~fG~Vyka~~~~--tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~~~ 438 (1170)
++||+|+||+||+|.++. +++.||||+++....+....+.+.+|+.+|++++|||||+++++|..
T Consensus 13 k~iG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~~~------------- 79 (277)
T d1xbba_ 13 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA------------- 79 (277)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEEES-------------
T ss_pred CCcccCCCeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEecc-------------
Confidence 479999999999998753 45789999997655555566789999999999999999999998721
Q ss_pred CCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccc
Q 001059 439 SGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGIIHR 517 (1170)
Q Consensus 439 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gIiHr 517 (1170)
...|+|||||+ |+|.+++.....+++..++.++.||+.||+|||++||+||
T Consensus 80 ----------------------------~~~~lvmE~~~~g~L~~~l~~~~~l~~~~~~~i~~qi~~gl~ylH~~~iiHr 131 (277)
T d1xbba_ 80 ----------------------------ESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEESNFVHR 131 (277)
T ss_dssp ----------------------------SSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred ----------------------------CCEEEEEEcCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHhhHHhCCcccC
Confidence 23589999997 5999999988899999999999999999999999999999
Q ss_pred CCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHHHHH
Q 001059 518 DLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGI 597 (1170)
Q Consensus 518 DLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGv 597 (1170)
||||+|||++.++.+||+|||+|+.+..... .........||+.|||||++.+ ..++.++|||||||
T Consensus 132 DlKp~Nill~~~~~~kl~DFGla~~~~~~~~------------~~~~~~~~~gt~~y~APE~l~~-~~~~~~sDiwS~Gv 198 (277)
T d1xbba_ 132 DLAARNVLLVTQHYAKISDFGLSKALRADEN------------YYKAQTHGKWPVKWYAPECINY-YKFSSKSDVWSFGV 198 (277)
T ss_dssp CCSGGGEEEEETTEEEECCCTTCEECCTTCS------------EEEC----CCCGGGCCHHHHHH-CEEEHHHHHHHHHH
T ss_pred CCcchhhcccccCcccccchhhhhhcccccc------------ccccccccCCCceecCchhhcC-CCCCchhhhccchh
Confidence 9999999999999999999999986532211 0112234579999999999987 56899999999999
Q ss_pred HHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 598 VFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 598 iL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
++|||++ ||......+....+. .+..++.+..+++++.+||.+||+.||++|||+.+|++
T Consensus 199 ~l~ellt~g~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~ 262 (277)
T d1xbba_ 199 LMWEAFSYGQKPYRGMKGSEVTAMLE--KGERMGCPAGCPREMYDLMNLCWTYDVENRPGFAAVEL 262 (277)
T ss_dssp HHHHHHTTTCCSSTTCCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred hhhHHhhCCCCCCCCCCHHHHHHHHH--cCCCCCCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence 9999985 787665555443332 34444455667889999999999999999999999854
|
| >d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Proto-oncogene serine/threonine-protein kinase Pim-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.5e-46 Score=416.75 Aligned_cols=248 Identities=26% Similarity=0.367 Sum_probs=206.1
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCCh----hhHHHHHHHHHHHHhcc--CCCceeEEEEEeecC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSL----PVNDRILREVATLSRLQ--HQHVVRYYQAWFETG 427 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~----~~~~~~~~Ev~iL~~l~--HpnIV~l~~~~~e~~ 427 (1170)
.++|++.+.||+|+||+||+|+++.+|+.||||+++...... ....++.+|+.+|++++ |||||+++++|.+
T Consensus 3 ~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~~~-- 80 (273)
T d1xwsa_ 3 ESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFER-- 80 (273)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEEC--
T ss_pred CCeEEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEEee--
Confidence 468999999999999999999999999999999997543221 11234678999999996 8999999998833
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC--cHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR--TLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g--sL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|+||||+.+ ++.+++.....+++.+++.++.||+.|
T Consensus 81 --------------------------------------~~~~~lv~e~~~~~~~l~~~~~~~~~l~e~~~~~~~~qi~~a 122 (273)
T d1xwsa_ 81 --------------------------------------PDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEA 122 (273)
T ss_dssp --------------------------------------SSEEEEEEECCSSEEEHHHHHHHHCSCCHHHHHHHHHHHHHH
T ss_pred --------------------------------------CCeEEEEEEeccCcchHHHHHhccCCCCHHHHHHHHHHHHHH
Confidence 4578999999963 788888888899999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCC-CCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDAR-NDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP 584 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~-~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~ 584 (1170)
|+|||++||+||||||+|||++.+ +.+||+|||+|+..... ..++.+||+.|||||++.+..
T Consensus 123 l~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~-----------------~~~~~~GT~~y~aPE~~~~~~ 185 (273)
T d1xwsa_ 123 VRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT-----------------VYTDFDGTRVYSPPEWIRYHR 185 (273)
T ss_dssp HHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSS-----------------CBCCCCSCGGGSCHHHHHHSC
T ss_pred HHHHHHCCCccccCcccceEEecCCCeEEECccccceecccc-----------------cccccccCCCcCCHHHHcCCC
Confidence 999999999999999999999854 79999999999754211 124568999999999998755
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhcc
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDA 661 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~ 661 (1170)
.++.++|||||||++|||++ ||..... +......++ ...++++++||++||+.||.+|||++|+|+||
T Consensus 186 ~~~~~~DiwSlGvilyell~g~~Pf~~~~~------i~~~~~~~~---~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp 256 (273)
T d1xwsa_ 186 YHGRSAAVWSLGILLYDMVCGDIPFEHDEE------IIRGQVFFR---QRVSSECQHLIRWCLALRPSDRPTFEEIQNHP 256 (273)
T ss_dssp BCHHHHHHHHHHHHHHHHHHSSCSCCSHHH------HHHCCCCCS---SCCCHHHHHHHHHHTCSSGGGSCCHHHHHTSG
T ss_pred CCCcccccccceeeehhHhhCCCCCCCchH------HhhcccCCC---CCCCHHHHHHHHHHccCCHhHCcCHHHHhcCH
Confidence 56788999999999999997 7765432 222233333 35678999999999999999999999999999
Q ss_pred CCCCch
Q 001059 662 LPPQME 667 (1170)
Q Consensus 662 ~~~~~~ 667 (1170)
|+++..
T Consensus 257 ~~~~~~ 262 (273)
T d1xwsa_ 257 WMQDVL 262 (273)
T ss_dssp GGSSCC
T ss_pred hhCCCC
Confidence 998753
|
| >d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Mycobacterial protein kinase PknB, catalytic domain species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=100.00 E-value=2e-45 Score=410.23 Aligned_cols=258 Identities=26% Similarity=0.411 Sum_probs=208.4
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|++.+.||+|+||+||+|+++.+|+.||||+++.... +......+.+|+.+|+.++|||||++++++....
T Consensus 5 l~drY~i~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~~---- 80 (277)
T d1o6ya_ 5 LSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAET---- 80 (277)
T ss_dssp ETTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEC----
T ss_pred ccceeEEeEEEeeCCCeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeecc----
Confidence 34679999999999999999999999999999999976543 3445567999999999999999999999885431
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.....+|+|||||+ ++|.+.+...+.+++.+++.++.||+.||+|||
T Consensus 81 --------------------------------~~~~~~~lvmE~~~g~~L~~~~~~~~~l~~~~~~~i~~qi~~al~~lH 128 (277)
T d1o6ya_ 81 --------------------------------PAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSH 128 (277)
T ss_dssp --------------------------------SSSEEEEEEEECCCEEEHHHHHHHHCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCCceEEEEEECCCCCEehhhhcccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12356899999997 589999988889999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+|||++.++.++|+|||+++....... ........+||+.|||||++.+ ..|+.++
T Consensus 129 ~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~------------~~~~~~~~~Gt~~Y~aPE~~~~-~~~~~~~ 195 (277)
T d1o6ya_ 129 QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN------------SVTQTAAVIGTAQYLSPEQARG-DSVDARS 195 (277)
T ss_dssp HTTEECCCCSGGGEEEETTSCEEECCCTTCEECC----------------------------TTCCHHHHTT-CCCCHHH
T ss_pred hCCccCccccCcccccCccccceeehhhhhhhhccccc------------cccccccccCcccccCHHHHcC-CCCCcce
Confidence 99999999999999999999999999999875432210 1112345689999999999988 5699999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCC-ccccCCHHHHHHHHHccCCCCCCCC-CHHHHHh
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPP-SWVAKFSEQESLLRRLMSPSPSDRP-SATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~-~~~~~~~e~~~LI~~~L~~dP~~RP-ta~eiL~ 659 (1170)
|||||||++|||++ ||......+.....+......+. .+...++++.+||++||++||.+|| |++++++
T Consensus 196 DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~~li~~~L~~dp~~R~~sa~~l~~ 269 (277)
T d1o6ya_ 196 DVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 269 (277)
T ss_dssp HHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSSCCHHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred ecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHccCCHhHCHhHHHHHHH
Confidence 99999999999997 89877777776666654443332 3456778999999999999999999 6676653
|
| >d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38-gamma species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.3e-45 Score=425.05 Aligned_cols=262 Identities=25% Similarity=0.397 Sum_probs=210.0
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
+.++|+++++||+|+||+||+|+++.+|+.||||+++....+....+.+.+|+.+|+.++|||||+++++|...+.
T Consensus 16 ~~~~Y~~i~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~~---- 91 (346)
T d1cm8a_ 16 VRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDET---- 91 (346)
T ss_dssp CBSSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSS----
T ss_pred cCCcEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCcc----
Confidence 3478999999999999999999999999999999998665565667789999999999999999999999854321
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
......+|+|||||+.+|..+.. ...+++..++.++.||+.||+|||++
T Consensus 92 ------------------------------~~~~~~~~lv~e~~~~~l~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~ 140 (346)
T d1cm8a_ 92 ------------------------------LDDFTDFYLVMPFMGTDLGKLMK-HEKLGEDRIQFLVYQMLKGLRYIHAA 140 (346)
T ss_dssp ------------------------------TTTCCCCEEEEECCSEEHHHHHH-HCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ------------------------------ccccceEEEEEecccccHHHHHH-hccccHHHHHHHHHHHHHHHHHHHhC
Confidence 01234679999999878877665 46799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+|+.... ..+..+||+.|+|||++.+...++.++||
T Consensus 141 ~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di 202 (346)
T d1cm8a_ 141 GIIHRDLKPGNLAVNEDCELKILDFGLARQADS------------------EMTGYVVTRWYRAPEVILNWMRYTQTVDI 202 (346)
T ss_dssp TEECCCCCGGGEEECTTCCEEECCCTTCEECCS------------------SCCSSCSCGGGCCTHHHHTTTCCCTTHHH
T ss_pred CCcccccCcchhhcccccccccccccceeccCC------------------ccccccccccccCHHHHcCCCCCCccchh
Confidence 999999999999999999999999999986421 12456899999999999876678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCC----------------------------CCccccCCHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGEL----------------------------PPSWVAKFSEQESLLR 641 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~----------------------------p~~~~~~~~e~~~LI~ 641 (1170)
||+||++|||++ ||................+.. +......++++.+||+
T Consensus 203 wSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~ 282 (346)
T d1cm8a_ 203 WSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLE 282 (346)
T ss_dssp HHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHH
T ss_pred hcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHH
Confidence 999999999997 776655443332222111111 1122345788999999
Q ss_pred HccCCCCCCCCCHHHHHhccCCCCch
Q 001059 642 RLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 642 ~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
+||..||.+|||+.|+|+||||++..
T Consensus 283 ~mL~~dP~~R~ta~eiL~Hp~f~~~~ 308 (346)
T d1cm8a_ 283 KMLVLDAEQRVTAGEALAHPYFESLH 308 (346)
T ss_dssp HHSCSSTTTSCCHHHHHHSGGGTTTC
T ss_pred HHCcCChhHCcCHHHHhcChhhCcCC
Confidence 99999999999999999999998764
|
| >d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase activated protein kinase 2, mapkap2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=6.8e-46 Score=425.09 Aligned_cols=256 Identities=27% Similarity=0.392 Sum_probs=206.6
Q ss_pred CccccCCceEEe-eeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecC
Q 001059 350 SSRYLNDFEELQ-PLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETG 427 (1170)
Q Consensus 350 ~~~~~~~y~~~~-~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~ 427 (1170)
....+++|+++. .||+|+||+||+|+++.+|+.||||+++. ...+.+|+.++.++ +|||||+++++|...
T Consensus 6 ~~~i~~~y~i~~~~lG~G~fg~Vy~a~~~~~~~~vAiK~i~~-------~~~~~~E~~~~~~~~~hpnIv~l~~~~~~~- 77 (335)
T d2ozaa1 6 KNAIIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD-------CPKARREVELHWRASQCPHIVRIVDVYENL- 77 (335)
T ss_dssp CSCGGGTEEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEC-------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE-
T ss_pred CCCcccCEEEeeEEeeeccCeEEEEEEECCCCCEEEEEEECC-------cHHHHHHHHHHHHhcCCCCCCeEEEEEeec-
Confidence 344578999986 59999999999999999999999999863 24577899987655 899999999988431
Q ss_pred ccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--CCCCHHHHHHHHHHHHH
Q 001059 428 VADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY--DHFDKELAWHLFRQIVE 504 (1170)
Q Consensus 428 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~--~~l~e~~~~~i~~qI~~ 504 (1170)
.....++|+|||||+ |+|.+++... ..+++.+++.++.||+.
T Consensus 78 -----------------------------------~~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~ 122 (335)
T d2ozaa1 78 -----------------------------------YAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGE 122 (335)
T ss_dssp -----------------------------------ETTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHH
T ss_pred -----------------------------------ccCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHH
Confidence 012467899999997 5999999764 36999999999999999
Q ss_pred HHHHHHhCCccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCccccc
Q 001059 505 GLAHIHGQGIIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQ 581 (1170)
Q Consensus 505 gL~yLHs~gIiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~ 581 (1170)
||+|||++||+||||||+|||++. ++.+||+|||+|+...... .....+||+.|||||++.
T Consensus 123 al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~ 186 (335)
T d2ozaa1 123 AIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN----------------SLTTPCYTPYYVAPEVLG 186 (335)
T ss_dssp HHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCC----------------CCCCCSCCCSSCCCCCCC
T ss_pred HHHHHHHcCCccccccccccccccccccccccccccceeeeccCCC----------------ccccccCCcccCCcHHHc
Confidence 999999999999999999999985 4679999999998653221 124468999999999998
Q ss_pred CCCCCCccchhHHHHHHHHHhhc---CCCchhHHHHHHH----HhhhcCCCC-CccccCCHHHHHHHHHccCCCCCCCCC
Q 001059 582 GWPKIDEKADMYSLGIVFFELWH---PFSTAMERQIVLS----DLKQKGELP-PSWVAKFSEQESLLRRLMSPSPSDRPS 653 (1170)
Q Consensus 582 ~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~----~l~~~~~~p-~~~~~~~~e~~~LI~~~L~~dP~~RPt 653 (1170)
+ ..|+.++|||||||+||+|++ ||........... +......+| +.+...++++.+||++||+.||++|||
T Consensus 187 ~-~~y~~~~DiwSlGvily~lltg~~Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s 265 (335)
T d2ozaa1 187 P-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMT 265 (335)
T ss_dssp G-GGGSHHHHHHHHHHHHHHHTTSSCSCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCC
T ss_pred C-CCCCHHHHHHhhchhHHHHhhCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcC
Confidence 8 569999999999999999997 8865543222211 111122233 345678899999999999999999999
Q ss_pred HHHHHhccCCCC
Q 001059 654 ATELLQDALPPQ 665 (1170)
Q Consensus 654 a~eiL~~~~~~~ 665 (1170)
+.++++|||+.+
T Consensus 266 ~~eil~hp~~~~ 277 (335)
T d2ozaa1 266 ITEFMNHPWIMQ 277 (335)
T ss_dssp HHHHHHSHHHHT
T ss_pred HHHHHcCHHhhC
Confidence 999999999754
|
| >d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fl cytokine receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-45 Score=422.09 Aligned_cols=250 Identities=22% Similarity=0.281 Sum_probs=202.8
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc-----EEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR-----HYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~-----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
++|++.++||+|+||+||+|+++.+++ .||+|++.... .......+.+|+.+|+++ +|||||+++++|.+
T Consensus 37 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~~~--- 112 (325)
T d1rjba_ 37 ENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKA-DSSEREALMSELKMMTQLGSHENIVNLLGACTL--- 112 (325)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC-------CHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHeEEeeEEeeCCCeEEEEEEEcCCCcccceeEEEEEEecccc-CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEEee---
Confidence 689999999999999999999986554 69999986433 233456789999999998 89999999999843
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc--------------------
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY-------------------- 487 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~-------------------- 487 (1170)
...+|+|||||+ |+|.+++...
T Consensus 113 -------------------------------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~ 155 (325)
T d1rjba_ 113 -------------------------------------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEE 155 (325)
T ss_dssp -------------------------------------SSSCEEEEECCTTCBHHHHHHTTTTCC----------------
T ss_pred -------------------------------------CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccc
Confidence 345799999996 6999998654
Q ss_pred ---CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCcccc
Q 001059 488 ---DHFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564 (1170)
Q Consensus 488 ---~~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1170)
..+++..++.++.||+.||+|||++|||||||||+|||++.++++||+|||+|+....... ...
T Consensus 156 ~~~~~l~~~~~~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~-------------~~~ 222 (325)
T d1rjba_ 156 EDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSN-------------YVV 222 (325)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTT-------------SEE
T ss_pred cccCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCc-------------eee
Confidence 2488999999999999999999999999999999999999999999999999986532210 111
Q ss_pred CcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHH
Q 001059 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 640 (1170)
Q Consensus 565 ~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI 640 (1170)
..+..||+.|||||++.+ ..|+.++|||||||++|||+| ||......+.....+. .+..++.+..+++++++||
T Consensus 223 ~~~~~gt~~y~aPE~l~~-~~~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~-~~~~~~~p~~~~~~l~~li 300 (325)
T d1rjba_ 223 RGNARLPVKWMAPESLFE-GIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQ-NGFKMDQPFYATEEIYIIM 300 (325)
T ss_dssp ETTEEECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHH-TTCCCCCCTTCCHHHHHHH
T ss_pred eccccCCCccCChHHHcC-CCCCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCCCCcCCHHHHHHH
Confidence 234578999999999987 579999999999999999985 7766554444444444 3334444556788999999
Q ss_pred HHccCCCCCCCCCHHHHHhc
Q 001059 641 RRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~ 660 (1170)
.+||+.||++|||+++|++|
T Consensus 301 ~~cl~~dP~~RPt~~ei~~~ 320 (325)
T d1rjba_ 301 QSCWAFDSRKRPSFPNLTSF 320 (325)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCChhHCcCHHHHHHH
Confidence 99999999999999999986
|
| >d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: epha2 receptor tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.6e-45 Score=407.97 Aligned_cols=251 Identities=20% Similarity=0.282 Sum_probs=196.3
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC----cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDG----RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg----~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
++|++.+.||+|+||+||+|.++.++ ..||||+++.. ........+.+|+.+|++++|||||+++++|.+
T Consensus 7 ~~~~~~~~iG~G~fG~Vy~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~~~----- 80 (283)
T d1mqba_ 7 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAG-YTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISK----- 80 (283)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS-----
T ss_pred HHeEeeeEEeeCCCeEEEEEEEeCCCCEEEEEEEEEEECcc-cChHHHHHHHHHHHHHHhcCCCCEeeeeEEEec-----
Confidence 57899999999999999999998655 47999999643 344455679999999999999999999999843
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhc-CCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESY-DHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~-~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...++++||||.+ ++.+.+... ..+++.++..++.||+.||+|
T Consensus 81 -----------------------------------~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~i~~gl~~ 125 (283)
T d1mqba_ 81 -----------------------------------YKPMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKY 125 (283)
T ss_dssp -----------------------------------SSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CCceEEEEEecccCcchhhhhcccccccHHHHHHHHHHHHHhhhh
Confidence 3457999999975 677766544 579999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||+++|+||||||+||||+.++.+||+|||+|+.+..... .........||+.|||||++.+ ..++.
T Consensus 126 lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~------------~~~~~~~~~gt~~Y~APE~l~~-~~~~~ 192 (283)
T d1mqba_ 126 LANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE------------ATYTTSGGKIPIRWTAPEAISY-RKFTS 192 (283)
T ss_dssp HHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------------------CCCGGGSCHHHHHS-CCCCH
T ss_pred ccccccccCccccceEEECCCCeEEEcccchhhcccCCCc------------cceEeccCCCCccccCHHHHcc-CCCCC
Confidence 9999999999999999999999999999999987643210 0112234578999999999988 67999
Q ss_pred cchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||++ |+............+. .+..++.....++++.+||.+||+.||++|||+.+|++.
T Consensus 193 ~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~~ 266 (283)
T d1mqba_ 193 ASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAIN-DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSI 266 (283)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHH-TTCCCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred cccccccHHHHHHHHhCCCCccccCCHHHHHHHHh-ccCCCCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHHH
Confidence 9999999999999986 5444433333444443 334444555678899999999999999999999999863
|
| >d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Bruton's tyrosine kinase (Btk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.4e-45 Score=404.04 Aligned_cols=245 Identities=20% Similarity=0.368 Sum_probs=206.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|+++++||+|+||+||+|+++ +++.||||+++..... .+.+.+|+.++++++|||||+++++|.+
T Consensus 4 ~~~~~~~~iG~G~fg~Vy~~~~~-~~~~vAvK~l~~~~~~---~~~~~~Ev~~~~~l~HpnIv~~~g~~~~--------- 70 (258)
T d1k2pa_ 4 KDLTFLKELGTGQFGVVKYGKWR-GQYDVAIKMIKEGSMS---EDEFIEEAKVMMNLSHEKLVQLYGVCTK--------- 70 (258)
T ss_dssp CCCCCCCCCCEETTEEEEEEEET-TTEEEEEEEEESSSSC---HHHHHHHHHHHHTCCCTTBCCEEEEECC---------
T ss_pred HHCEEeEEEecCCCeEEEEEEEC-CCCEEEEEEECcCcCC---HHHHHHHHHHHHhcCCCceeeEEEEEee---------
Confidence 68999999999999999999996 7889999999864443 4679999999999999999999998833
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...+|+|||||+ |+|.+++.. ...+++..+++++.||++||+|||++
T Consensus 71 -------------------------------~~~~~iv~Ey~~~g~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~~LH~~ 119 (258)
T d1k2pa_ 71 -------------------------------QRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESK 119 (258)
T ss_dssp -------------------------------SSSEEEEEECCTTEEHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred -------------------------------CCceEEEEEccCCCcHHHhhhccccCCcHHHHHHHHHHHHHHHHHHhhc
Confidence 345899999997 688887654 45799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+|+.+.... ........||+.|+|||++.+ ..|+.++||
T Consensus 120 ~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~--------------~~~~~~~~~t~~y~aPE~~~~-~~~~~ksDi 184 (258)
T d1k2pa_ 120 QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDE--------------YTSSVGSKFPVRWSPPEVLMY-SKFSSKSDI 184 (258)
T ss_dssp TBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSS--------------CCCCCCSCCCGGGCCHHHHHH-CCCCHHHHH
T ss_pred CcccccccceeEEEcCCCcEEECcchhheeccCCC--------------ceeecccCCCCCcCCcHHhcC-CCCCcceee
Confidence 99999999999999999999999999998653221 111234679999999999987 568999999
Q ss_pred HHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 593 YSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 593 wSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||++|||+| ||......+....+.. +..++.+...++++.+||++||+.||++|||+++|++|
T Consensus 185 wS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~--~~~~~~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~ 254 (258)
T d1k2pa_ 185 WAFGVLMWEIYSLGKMPYERFTNSETAEHIAQ--GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLSN 254 (258)
T ss_dssp HHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHT--TCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred cccchhhHhHHhcCCCCCCCCCHHHHHHHHHh--CCCCCCcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence 999999999986 7877766655444432 33344445677899999999999999999999999987
|
| >d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tyrosine-protein kinase ZAP-70 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.7e-45 Score=410.76 Aligned_cols=249 Identities=20% Similarity=0.266 Sum_probs=203.0
Q ss_pred CCceEEe-eeccCCcEEEEEEEEccC--CcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQ-PLGHGGFGHVVLCKNKLD--GRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~-~LG~G~fG~Vyka~~~~t--g~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|.+.+ +||+|+||+||+|.++.+ +..||||+++.. ......+++.+|+.+|++++|||||+++++|..
T Consensus 8 ~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~~~------ 80 (285)
T d1u59a_ 8 DNLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQG-TEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA------ 80 (285)
T ss_dssp GGEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSS-CCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEES------
T ss_pred cCeEECCcEEecccCeEEEEEEEecCCCcEEEEEEEEChh-cCHHHHHHHHHHHHHHHhCCCCCEeeEeeeecc------
Confidence 5677877 499999999999988643 558999999743 344556789999999999999999999998721
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
..+|+|||||+ |+|.+++.. ...+++..+..++.||+.||+||
T Consensus 81 -----------------------------------~~~~lvmE~~~~g~L~~~l~~~~~~l~~~~~~~i~~qi~~gL~yl 125 (285)
T d1u59a_ 81 -----------------------------------EALMLVMEMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYL 125 (285)
T ss_dssp -----------------------------------SSEEEEEECCTTEEHHHHHTTCTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------------CeEEEEEEeCCCCcHHHHhhccccCCCHHHHHHHHHHHHHHHHHH
Confidence 23689999997 599998765 45799999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+|+.+...... ........||+.|||||++.+ ..++.+
T Consensus 126 H~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~------------~~~~~~~~gt~~y~aPE~~~~-~~~~~k 192 (285)
T d1u59a_ 126 EEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSY------------YTARSAGKWPLKWYAPECINF-RKFSSR 192 (285)
T ss_dssp HHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCE------------ECCCCSSCCCGGGCCHHHHHH-CEECHH
T ss_pred HhCCeecCcCchhheeeccCCceeeccchhhhcccccccc------------cccccccccCccccChHHHhC-CCCCcc
Confidence 9999999999999999999999999999999876432111 112244579999999999987 569999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||+| ||......+....+. .+..++.+..+++++.+||.+||+.||++|||+.+|++.
T Consensus 193 sDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~ 265 (285)
T d1u59a_ 193 SDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIE--QGKRMECPPECPPELYALMSDCWIYKWEDRPDFLTVEQR 265 (285)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred chhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH--cCCCCCCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999985 787665554443332 344444556778899999999999999999999999753
|
| >d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cell division protein kinase 9, CDK9 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.8e-45 Score=415.10 Aligned_cols=270 Identities=22% Similarity=0.384 Sum_probs=209.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|+++++||+|+||+||+|+++.+|+.||||++...........++.+|+.+|++++||||+++++++......
T Consensus 9 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~---- 84 (318)
T d3blha1 9 VSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASP---- 84 (318)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC--------
T ss_pred cCCEEEEEEEecCcCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeeccccc----
Confidence 5899999999999999999999999999999999976655555567889999999999999999999988543100
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHH-HhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVF-ESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l-~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
.......+|++||||++++.... .....+++..++.++.||+.||.|||++
T Consensus 85 ----------------------------~~~~~~~~~iv~e~~~~~~~~~~~~~~~~~~~~~~~~i~~qil~~l~~lH~~ 136 (318)
T d3blha1 85 ----------------------------YNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRN 136 (318)
T ss_dssp ----------------------------------CEEEEEECCCEEHHHHHTCTTCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred ----------------------------ccccCceEEEEEeccCCCccchhhhcccccccHHHHHHHHHHHHHHHHhccC
Confidence 00123568999999987655544 4556799999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||+|+.+....... .....+.+||+.|+|||++.+...|+.++||
T Consensus 137 ~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~-----------~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~Di 205 (318)
T d3blha1 137 KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQ-----------PNRYTNRVVTLWYRPPELLLGERDYGPPIDL 205 (318)
T ss_dssp TEECCCCCGGGEEECTTSCEEECCCTTCEECCC----------------CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHH
T ss_pred CEEecCcCchheeecCCCcEEeeecceeeecccccccc-----------cccccceecCHHHhhHHHHcCCCCCCcHHHc
Confidence 99999999999999999999999999998654322111 0112346899999999999876678999999
Q ss_pred HHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCcc-----------------------------ccCCHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSW-----------------------------VAKFSEQESLL 640 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~-----------------------------~~~~~e~~~LI 640 (1170)
|||||++|||++ ||.+..+......+....+..++.. ...++++.+||
T Consensus 206 wSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl 285 (318)
T d3blha1 206 WGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLI 285 (318)
T ss_dssp HHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHH
T ss_pred ccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHH
Confidence 999999999997 8876655544433333222222110 11256788999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.+||+.||++|||++|+|+||||...
T Consensus 286 ~~mL~~dP~~R~sa~elL~Hpff~~~ 311 (318)
T d3blha1 286 DKLLVLDPAQRIDSDDALNHDFFWSD 311 (318)
T ss_dssp HHHSCSSTTTSCCHHHHHHSGGGSSS
T ss_pred HHHCcCChhHCcCHHHHHcChhhccC
Confidence 99999999999999999999999753
|
| >d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Glycogen synthase kinase-3 beta (Gsk3b) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1e-44 Score=418.09 Aligned_cols=257 Identities=26% Similarity=0.388 Sum_probs=207.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
-+|+.+++||+|+||+||+|+++.+|+.||||+++..... ..+|+.+|++++|||||+++++|...+.
T Consensus 20 ~~Y~~~k~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~------~~~Ei~il~~l~h~niv~~~~~~~~~~~------ 87 (350)
T d1q5ka_ 20 VSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRF------KNRELQIMRKLDHCNIVRLRYFFYSSGE------ 87 (350)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSSS------CCHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred CCcEeeeEEeeCcCeEEEEEEECCCCCEEEEEEECccchH------HHHHHHHHHhcCCCCCCcEEEEEEecCc------
Confidence 4799999999999999999999999999999999754322 3479999999999999999999865321
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFE----SYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~----~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
..+..++|+|||||++++...+. ....+++.+++.++.||+.||+|||
T Consensus 88 ----------------------------~~~~~~~~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH 139 (350)
T d1q5ka_ 88 ----------------------------KKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIH 139 (350)
T ss_dssp ----------------------------CCSCCEEEEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------cCCceEEEEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 12356889999999987655543 4557999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
++||+||||||+|||++.++ .+||+|||+|+...... ...+.+||+.|+|||.+.+...|+.+
T Consensus 140 ~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~----------------~~~~~~gt~~y~aPE~~~~~~~~~~~ 203 (350)
T d1q5ka_ 140 SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGE----------------PNVSYICSRYYRAPELIFGATDYTSS 203 (350)
T ss_dssp TTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTS----------------CCCSCCSCTTSCCHHHHTTCSSCCTH
T ss_pred hcCCcccCCCcceEEEecCCCceeEecccchhhccCCc----------------ccccccccccccChHHhhcccCCCcc
Confidence 99999999999999999775 89999999998653221 12346899999999998876679999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCC-----------------CC---------CccccCCHHHHHHH
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGE-----------------LP---------PSWVAKFSEQESLL 640 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~-----------------~p---------~~~~~~~~e~~~LI 640 (1170)
+||||+||++|||++ ||...........+....+. ++ ......++++.+||
T Consensus 204 ~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl 283 (350)
T d1q5ka_ 204 IDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALC 283 (350)
T ss_dssp HHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHH
T ss_pred eeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHH
Confidence 999999999999996 78766555444333221111 11 01234578999999
Q ss_pred HHccCCCCCCCCCHHHHHhccCCCCch
Q 001059 641 RRLMSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
.+||..||.+|||+.|+|+||||.+..
T Consensus 284 ~~mL~~dP~~R~ta~e~L~Hp~f~~~~ 310 (350)
T d1q5ka_ 284 SRLLEYTPTARLTPLEACAHSFFDELR 310 (350)
T ss_dssp HHHSCSSGGGSCCHHHHHTSGGGGGGG
T ss_pred HHHccCChhHCcCHHHHhcCHhhcccc
Confidence 999999999999999999999997653
|
| >d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Cyclin-dependent PK, CDK5 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.8e-44 Score=403.12 Aligned_cols=258 Identities=26% Similarity=0.442 Sum_probs=212.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|+++++||+|+||+||+|+++.+|+.||||+++..........++.+|+.+|+.++||||++++++|..
T Consensus 1 ~~ry~~i~~LG~G~fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~-------- 72 (292)
T d1unla_ 1 MQKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHS-------- 72 (292)
T ss_dssp CCSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC--------
T ss_pred CCCCEeeeEEecCcCeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccccc--------
Confidence 478999999999999999999999999999999998766555667889999999999999999999998843
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
...++++|+++.+ +|..++...+.+++..++.++.|++.||+|||++
T Consensus 73 --------------------------------~~~~~iv~~~~~~~~l~~~~~~~~~~~~~~~~~~~~q~~~aL~~lH~~ 120 (292)
T d1unla_ 73 --------------------------------DKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSR 120 (292)
T ss_dssp --------------------------------SSEEEEEEECCSEEHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------------ccceeEEeeeccccccccccccccccchhHHHHHHHHHHHHHHHhhcC
Confidence 4578999999976 6777777778899999999999999999999999
Q ss_pred CccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchh
Q 001059 513 GIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADM 592 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDI 592 (1170)
||+||||||+|||++.++.+||+|||.|+...... .......+++.|+|||++.+...++.++||
T Consensus 121 ~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~---------------~~~~~~~~~~~~~~pe~~~~~~~~~~~~Di 185 (292)
T d1unla_ 121 NVLHRDLKPQNLLINRNGELKLANFGLARAFGIPV---------------RCYSAEVVTLWYRPPDVLFGAKLYSTSIDM 185 (292)
T ss_dssp TEECCCCSGGGEEECTTCCEEECCCTTCEECCSCC---------------SCCCSCCSCGGGCCHHHHTTCSCCCTHHHH
T ss_pred CEeeecccCcccccccCCceeeeecchhhcccCCC---------------ccceeeccccchhhhhHhccCCCCCchhhc
Confidence 99999999999999999999999999998653221 112344688999999999876668999999
Q ss_pred HHHHHHHHHhhc---CCCchhH-HHHHHHHhhhcCC--------------------------CCCccccCCHHHHHHHHH
Q 001059 593 YSLGIVFFELWH---PFSTAME-RQIVLSDLKQKGE--------------------------LPPSWVAKFSEQESLLRR 642 (1170)
Q Consensus 593 wSlGviL~ELlt---Pf~~~~~-~~~~~~~l~~~~~--------------------------~p~~~~~~~~e~~~LI~~ 642 (1170)
|||||++|||++ ||....+ .+.........+. ........++.+.+||++
T Consensus 186 wSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~ 265 (292)
T d1unla_ 186 WSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQN 265 (292)
T ss_dssp HHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHH
T ss_pred cccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhhhhhhcccccccccccccchhhhccccCCHHHHHHHHH
Confidence 999999999997 6543332 2222221111111 111223456789999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||+.||.+|||++|+|+||||.+.
T Consensus 266 mL~~dP~~R~sa~e~L~Hp~f~~~ 289 (292)
T d1unla_ 266 LLKCNPVQRISAEEALQHPYFSDF 289 (292)
T ss_dssp HSCSSGGGSCCHHHHTTSGGGSSC
T ss_pred HccCChhHCcCHHHHhcChhhcCC
Confidence 999999999999999999999864
|
| >d1qe0a2 d.104.1.1 (A:1-325) Histidyl-tRNA synthetase (HisRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Staphylococcus aureus [TaxId: 1280]
Probab=100.00 E-value=1.6e-45 Score=420.56 Aligned_cols=298 Identities=16% Similarity=0.168 Sum_probs=210.9
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-Cc---ccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-CP---QFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~~---~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.|+|++|++|.++..+++++++++++|++|||++|.||+| .+..+ ++ ...+++|+|.|++|+.++||||+|
T Consensus 3 ~lP~G~rD~lp~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~l~~~~g~~~~~~~~~~~~~~d~~~~~~~lr~d~t 82 (325)
T d1qe0a2 3 KIPRGTQDILPEDSKKWRYIENQLDELMTFYNYKEIRTPIFESTDLFARGVGDSTDVVQKEMYTFKDKGDRSITLRPEGT 82 (325)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHHHTCEECBCCSEEEHHHHCC-----------CCEEECHHHHCCEEECSCSH
T ss_pred CCCCCCcCCCHHHHHHHHHHHHHHHHHHHHcCCeEeeCcccccHHHhccccCCchhHHHHHHhhhhcccccccccccccc
Confidence 57999999999999999999999999999999999999999 33333 33 357899999999999999999999
Q ss_pred HHHHHHHHhCC-----CCceeEEEecCeEEcCCCCCC-CCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEE
Q 001059 785 LPFIRWAISNQ-----KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDI 858 (1170)
Q Consensus 785 ~~iaR~~~~~~-----~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i 858 (1170)
+|++|.++.+. ..|+|+||+|+|||+++++.+ .|||+|+|+|+||.+++.+|+|+|.++.++++.+|+.+ +.+
T Consensus 83 ~~~~r~~~~~~~~~~~~~p~R~~Y~g~VfR~~~~~~~~~rE~~Q~G~EiiG~~~~~ad~Eii~l~~~~l~~~g~~~-~~i 161 (325)
T d1qe0a2 83 AAVVRSYIEHKMQGNPNQPIKLYYNGPMFRYERKQKGRYRQFNQFGVEAIGAENPSVDAEVLAMVMHIYQSFGLKH-LKL 161 (325)
T ss_dssp HHHHHHHHHTTGGGCSSCSEEEEEEEEEECC-------CCEEEEEEEEEESCCCHHHHHHHHHHHHHHHHHTTCCC-EEE
T ss_pred ccHHHHHHhhccccccccchhhheecceeeeccccCCccceeeecceeecCCcCcHHHHHHHHHHHHHHHhhCCcC-cce
Confidence 99999877642 359999999999999877754 55799999999999999999999999999999999986 999
Q ss_pred EeCcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCc--HHHHHHHHHHHHHhcCCh
Q 001059 859 HLNHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLA--EAVVNRLQTVGLRFCGAA 936 (1170)
Q Consensus 859 ~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~l~~l~~~~~g~~ 936 (1170)
.|||++++..+++......+. +....... . + +. ........+. ....+..
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~~-------~~~~~~~~---~--~---~~--~~~~~~~~~~~~~~~~~~~----------- 213 (325)
T d1qe0a2 162 VINSVGDMASRKEYNEALVKH-------FEPVIHEF---C--S---DC--QSRLHTDPMRILDCKVDRD----------- 213 (325)
T ss_dssp EEEECCCHHHHHHHHHHHHHH-------HGGGGGGS---C--H---HH--HHTTTTCGGGGC------------------
T ss_pred eecccccHHHHHHHHHHHHHH-------HHHHHHHH---H--H---Hh--hhhhhcchhhhhhhhcchh-----------
Confidence 999999887776654322111 11111000 0 0 00 0000000000 0000011
Q ss_pred hhHHHHHhccCC-CChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccc
Q 001059 937 DQALPRLRGALP-ADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGR 1013 (1170)
Q Consensus 937 ~~~l~~l~~~~~-~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGR 1013 (1170)
...++.+..... ......+.++.+ .+..+++ .+.+|++++||++||||+||++|+.+.+. .+..++||+|||
T Consensus 214 ~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~D~s~~rg~~YYTGivFe~~~~~~~~---~g~~~~i~~GGR 288 (325)
T d1qe0a2 214 KEAIKTAPRITDFLNEESKAYYEQVKAYLDDLGI--PYTEDPNLVRGLDYYTHTAFELMMDNPNY---DGAITTLCGGGR 288 (325)
T ss_dssp -----CCCCGGGCCCTTHHHHHHHHHHHHHHHTC--CCEECTTCCCCCTTEEEEEEEEEEECTTS---TTSEEEEEEEEE
T ss_pred HHHHHhhhhhhhhhhhhHHHHHHHHHHHHHhhhh--hhhcccccccCCCCcCCeEEEEEecCCCC---CCccCceecccc
Confidence 111111111111 123345556666 5666665 68999999999999999999999987543 234458999999
Q ss_pred cchhhhhcccccccccCCCCCCCCceEEeccHHHHHhhccC
Q 001059 1014 YDYLLHRMWDREYVGYASRTNPPSGVGASLALETIIQHYPV 1054 (1170)
Q Consensus 1014 YD~L~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~~ 1054 (1170)
||+|+++||+. +.||||||+++|||+.+|++
T Consensus 289 YD~L~~~f~~~----------~~pAvGfsi~ld~L~~~l~~ 319 (325)
T d1qe0a2 289 YNGLLELLDGP----------SETGIGFALSIERLLLALEE 319 (325)
T ss_dssp EESHHHHTTCC----------CCEEEEEEEEHHHHHHHHHH
T ss_pred HHHHHHHcCCC----------CCCeEEEEeeHHHHHHHHHH
Confidence 99999999653 36999999999999999863
|
| >d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase Erk2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5e-44 Score=411.52 Aligned_cols=264 Identities=23% Similarity=0.339 Sum_probs=208.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++++.||+|+||+||+|+++.+|+.||||+++... .....+++.+|+.+|+.++||||++++++|....
T Consensus 8 ~rY~~~~~LG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~~~------- 79 (345)
T d1pmea_ 8 PRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFE-HQTYCQRTLREIKILLRFRHENIIGINDIIRAPT------- 79 (345)
T ss_dssp TTEEEEEECC---CCCEEEEEETTTCSEEEEEEECCTT-CHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSS-------
T ss_pred CCeEEEEEEeeccCeEEEEEEECCCCcEEEEEEEehhc-ChHHHHHHHHHHHHHHHcCCCCCCcEEEEEeecc-------
Confidence 56999999999999999999999999999999997433 3445568899999999999999999999884321
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
.....++|++|++++++|.+++.. .++++..++.++.||+.||+|||++||
T Consensus 80 ----------------------------~~~~~~~~l~~~~~~g~L~~~l~~-~~l~~~~i~~i~~qil~al~yLH~~~i 130 (345)
T d1pmea_ 80 ----------------------------IEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 130 (345)
T ss_dssp ----------------------------TTTCCCEEEEEECCCEEHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred ----------------------------ccccceEEEEEeecCCchhhhhhc-CCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence 012345678877778899999865 469999999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
|||||||+|||++.++.+||+|||+|+......... ......+||+.|+|||++.....++.++||||
T Consensus 131 iHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~------------~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwS 198 (345)
T d1pmea_ 131 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHT------------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWS 198 (345)
T ss_dssp ECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBC------------CTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHH
T ss_pred cCCCCCcceEEECCCCCEEEcccCceeeccCCCccc------------eeeccccccceechHHHhhcCCCCCchhhhhc
Confidence 999999999999999999999999998754332111 11245689999999999876567899999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcC------------------------CCC----CccccCCHHHHHHHHHc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKG------------------------ELP----PSWVAKFSEQESLLRRL 643 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~------------------------~~p----~~~~~~~~e~~~LI~~~ 643 (1170)
+||++|||++ ||................. ..+ ..+...++++.+||.+|
T Consensus 199 lG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~ 278 (345)
T d1pmea_ 199 VGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 278 (345)
T ss_dssp HHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHH
T ss_pred cCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhhhhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHH
Confidence 9999999996 8865544332222111000 000 12345667899999999
Q ss_pred cCCCCCCCCCHHHHHhccCCCCch
Q 001059 644 MSPSPSDRPSATELLQDALPPQME 667 (1170)
Q Consensus 644 L~~dP~~RPta~eiL~~~~~~~~~ 667 (1170)
|+.||.+|||++++|+|||+.+..
T Consensus 279 L~~dP~~R~ta~e~L~hpf~~~~~ 302 (345)
T d1pmea_ 279 LTFNPHKRIEVEQALAHPYLEQYY 302 (345)
T ss_dssp SCSSTTTSCCHHHHHTSGGGTTTC
T ss_pred ccCChhHCcCHHHHhcCHhhccCC
Confidence 999999999999999999987653
|
| >d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Vascular endothelial growth factor receptor 2 (kdr) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-44 Score=407.42 Aligned_cols=251 Identities=24% Similarity=0.343 Sum_probs=196.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
++|++.++||+|+||+||+|++.. +++.||||+++.. ......+.+.+|+..+.++ +|||||.+++++.+.
T Consensus 13 ~~y~~~~~iG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~-~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~-- 89 (299)
T d1ywna1 13 DRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEG-ATHSEHRALMSELKILIHIGHHLNVVNLLGACTKP-- 89 (299)
T ss_dssp GGEEEEEEEEECSSCEEEEEEEESTTSSSCEEEEEEEEC-----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECST--
T ss_pred HHEEEeeEEeecCCeEEEEEEEcCCCcccCCeEEEEEEEccc-cCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeeccC--
Confidence 689999999999999999999864 3578999998743 3334456788888888887 689999999887432
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCCC
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFD 491 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~ 491 (1170)
...+|+|||||+ |+|.+++... ..++
T Consensus 90 -------------------------------------~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~ 132 (299)
T d1ywna1 90 -------------------------------------GGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLT 132 (299)
T ss_dssp -------------------------------------TSCCEEEEECCTTCBHHHHHHHTGGGBCC-----------CBC
T ss_pred -------------------------------------CCeEEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCC
Confidence 345799999997 6999998643 2488
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccC
Q 001059 492 KELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGT 571 (1170)
Q Consensus 492 e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT 571 (1170)
+.+++.++.||++||+|||++|||||||||+|||++.++++||+|||+|+...... .....+..+||
T Consensus 133 ~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~-------------~~~~~~~~~gt 199 (299)
T d1ywna1 133 LEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDP-------------DYVRKGDARLP 199 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC------CCSCT-------------TSCCTTSCCCG
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEccCcchhhccccc-------------cccccCceeeC
Confidence 99999999999999999999999999999999999999999999999998653221 01123456899
Q ss_pred ccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCC
Q 001059 572 YFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPS 647 (1170)
Q Consensus 572 ~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~d 647 (1170)
+.|||||++.+ ..++.++|||||||++|||++ ||......+.....+. .+..++.+...++++.+||.+||+.|
T Consensus 200 ~~y~APE~l~~-~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~d 277 (299)
T d1ywna1 200 LKWMAPETIFD-RVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLK-EGTRMRAPDYTTPEMYQTMLDCWHGE 277 (299)
T ss_dssp GGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHH-HTCCCCCCTTCCHHHHHHHHHHTCSS
T ss_pred ccccchhHhhc-CCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCCCccCCHHHHHHHHHHcCCC
Confidence 99999999988 679999999999999999986 6655444444444443 34444455567889999999999999
Q ss_pred CCCCCCHHHHHhc
Q 001059 648 PSDRPSATELLQD 660 (1170)
Q Consensus 648 P~~RPta~eiL~~ 660 (1170)
|++|||+.++++|
T Consensus 278 P~~Rpt~~eil~~ 290 (299)
T d1ywna1 278 PSQRPTFSELVEH 290 (299)
T ss_dssp GGGSCCHHHHHHH
T ss_pred hhHCcCHHHHHHH
Confidence 9999999999987
|
| >d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-src tyrosine kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.9e-44 Score=403.61 Aligned_cols=251 Identities=23% Similarity=0.319 Sum_probs=198.3
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
.++|++.+.||+|+||+||+|+++ +++.||||+++.... ..+.|.+|+.+|++++|||||+++++|.+
T Consensus 16 ~~~~~i~~~iG~G~fg~Vy~~~~~-~~~~vAiK~l~~~~~---~~~~~~~E~~~l~~l~h~nIv~~~g~~~~-------- 83 (285)
T d1fmka3 16 RESLRLEVKLGQGCFGEVWMGTWN-GTTRVAIKTLKPGTM---SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-------- 83 (285)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TTEEEEEEECCTTSS---CHHHHHHHHHHHHHCCCTTBCCEEEEECS--------
T ss_pred HHHEEEeeEEeeCCCeEEEEEEEC-CCCEEEEEEECcccC---CHHHHHHHHHHHHhcccCCEeEEEEEEec--------
Confidence 378999999999999999999997 456799999975433 24679999999999999999999998722
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES--YDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~--~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
..+|+|||||+ |+|...+.. ...+++.+++.++.||+.||+|||
T Consensus 84 ---------------------------------~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH 130 (285)
T d1fmka3 84 ---------------------------------EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVE 130 (285)
T ss_dssp ---------------------------------SSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHh
Confidence 23589999997 578877753 356999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
++||+||||||+||||+.++++||+|||+|+.+..... ...+...||+.|+|||++.+ ..++.++
T Consensus 131 ~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~--------------~~~~~~~gt~~y~aPE~~~~-~~~~~ks 195 (285)
T d1fmka3 131 RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY--------------TARQGAKFPIKWTAPEAALY-GRFTIKS 195 (285)
T ss_dssp HTTCCCSCCSGGGEEECGGGCEEECCCCTTC----------------------------CCGGGSCHHHHHH-CCCCHHH
T ss_pred hhheecccccceEEEECCCCcEEEcccchhhhccCCCc--------------eeeccccccccccChHHHhC-CCCCcHH
Confidence 99999999999999999999999999999986532211 11234579999999999987 6789999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh--ccCCCC
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ--DALPPQ 665 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~--~~~~~~ 665 (1170)
|||||||++|||++ ||............+. .+..++....+++++.+||.+||+.||++|||+++|++ ++|+..
T Consensus 196 DI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~ 274 (285)
T d1fmka3 196 DVWSFGILLTELTTKGRVPYPGMVNREVLDQVE-RGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTS 274 (285)
T ss_dssp HHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHH-TTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSC
T ss_pred hhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHH-hcCCCCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcC
Confidence 99999999999996 4444333333333333 23334455677889999999999999999999999987 555543
|
| >d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Focal adhesion kinase 1 (fak) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.6e-44 Score=402.04 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=193.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~ 431 (1170)
++|++.+.||+|+||+||+|++..++ ..||||+++.. ......+.+.+|+.+|++++|||||+++++|.
T Consensus 7 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~vaik~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~------- 78 (273)
T d1mp8a_ 7 ERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNC-TSDSVREKFLQEALTMRQFDHPHIVKLIGVIT------- 78 (273)
T ss_dssp GGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTT-TSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-------
T ss_pred HHeEEEEEEeeCCCcEEEEEEEecCCceeEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe-------
Confidence 68999999999999999999987543 46888887533 33445567999999999999999999999872
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAHI 509 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yL 509 (1170)
...+|+|||||+ |+|.+++.. ...+++..++.++.||++||+||
T Consensus 79 ----------------------------------~~~~~iv~E~~~~g~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~yl 124 (273)
T d1mp8a_ 79 ----------------------------------ENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYL 124 (273)
T ss_dssp ----------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------------------------cCeEEEEEEeccCCcHHhhhhccCCCCCHHHHHHHHHHHHHHhhhh
Confidence 134689999997 578877654 45699999999999999999999
Q ss_pred HhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 510 HGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 510 Hs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
|++||+||||||+|||++.++.+||+|||+|+....... ...+...||+.|+|||++.+ ..|+.+
T Consensus 125 H~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~--------------~~~~~~~gt~~y~apE~l~~-~~~~~~ 189 (273)
T d1mp8a_ 125 ESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY--------------YKASKGKLPIKWMAPESINF-RRFTSA 189 (273)
T ss_dssp HHTTCCCSCCSGGGEEEEETTEEEECC---------------------------------CCGGGCCHHHHHH-CCCSHH
T ss_pred cccCeeccccchhheeecCCCcEEEccchhheeccCCcc--------------eeccceecCcccchhhHhcc-CCCCCc
Confidence 999999999999999999999999999999987542211 11234578999999999987 579999
Q ss_pred chhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 590 ADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 590 sDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
+|||||||++|||++ ||......+....+. .+..++.+..+++++.+||.+||+.||.+|||+.+|+++
T Consensus 190 ~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~--~~~~~~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~ 262 (273)
T d1mp8a_ 190 SDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIE--NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ 262 (273)
T ss_dssp HHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred cccccchHHHHHHHhcCCCCCCCCCHHHHHHHHH--cCCCCCCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 999999999999985 776655555444433 344445566788899999999999999999999999976
|
| >d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: EGF receptor tyrosine kinase, Erbb-1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=3.3e-44 Score=408.27 Aligned_cols=248 Identities=24% Similarity=0.360 Sum_probs=195.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCc----EEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGR----HYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVAD 430 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~----~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~ 430 (1170)
++|+++++||+|+||+||+|++..+|+ .||+|+++.. .+....+.+.+|+.+|++++|||||+++++|.+
T Consensus 9 ~dy~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~~----- 82 (317)
T d1xkka_ 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA-TSPKANKEILDEAYVMASVDNPHVCRLLGICLT----- 82 (317)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECC----CCEEEEEEEECC-----CTHHHHHHHHHHHHHCCCTTBCCEEEEEES-----
T ss_pred HHCEEeeEEecCCCeEEEEEEEcCCCCEEEEEEEEEEeccc-cCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-----
Confidence 579999999999999999999988876 5788887633 233446789999999999999999999999843
Q ss_pred cCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHH
Q 001059 431 FDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLAH 508 (1170)
Q Consensus 431 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~y 508 (1170)
...+++|+||. ++|.+.+.. ...+++..++.++.||+.||+|
T Consensus 83 ------------------------------------~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~gl~y 126 (317)
T d1xkka_ 83 ------------------------------------STVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126 (317)
T ss_dssp ------------------------------------SSEEEEEECCTTCBHHHHHHHTSSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------------CCeeEEEEeccCCcccccccccccCCCHHHHHHHHHHHHHHHHH
Confidence 12467777775 688887765 4579999999999999999999
Q ss_pred HHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCc
Q 001059 509 IHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDE 588 (1170)
Q Consensus 509 LHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ 588 (1170)
||++|||||||||+|||++.++++||+|||+|+.+..... ........||+.|||||++.+ ..|+.
T Consensus 127 LH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~-------------~~~~~~~~gt~~y~APE~l~~-~~~~~ 192 (317)
T d1xkka_ 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEK-------------EYHAEGGKVPIKWMALESILH-RIYTH 192 (317)
T ss_dssp HHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC---------------------CCTTTSCHHHHHH-CCCCH
T ss_pred HHHcCcccCcchhhcceeCCCCCeEeeccccceecccccc-------------cccccccccCccccChHHHhc-CCCCh
Confidence 9999999999999999999999999999999997643211 111234579999999999987 57999
Q ss_pred cchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 589 KADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 589 ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
++|||||||++|||+| ||......+. ...+. .+..++....+++++.+||.+||+.||.+|||+.+|++|
T Consensus 193 ~sDvwS~Gvil~el~t~g~~p~~~~~~~~~-~~~i~-~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~ 266 (317)
T d1xkka_ 193 QSDVWSYGVTVWELMTFGSKPYDGIPASEI-SSILE-KGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE 266 (317)
T ss_dssp HHHHHHHHHHHHHHHTTSCCTTTTSCGGGH-HHHHH-HTCCCCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hhhhhhHHHHHHHHHHCCCCCCCCCCHHHH-HHHHH-cCCCCCCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence 9999999999999996 5654433333 22332 334444445677899999999999999999999999987
|
| >d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Musk tyrosine kinase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=5.6e-44 Score=403.35 Aligned_cols=249 Identities=20% Similarity=0.313 Sum_probs=205.9
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++|++++.||+|+||+||+|+++. +++.||||+++.. .......++.+|+.+|++++||||++++++|..
T Consensus 13 ~~~~~~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~---- 87 (301)
T d1lufa_ 13 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEE-ASADMQADFQREAALMAEFDNPNIVKLLGVCAV---- 87 (301)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTT-CCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS----
T ss_pred HHcEEeEEEeeCCCeEEEEEEECCCccCCCCeEEEEEEEChh-cChHHHHHHHHHHHHHHhcCCCCcccceeeecc----
Confidence 689999999999999999999863 5678999998743 344456789999999999999999999999833
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--------------------
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-------------------- 488 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-------------------- 488 (1170)
...++++||||+ |+|.+++....
T Consensus 88 ------------------------------------~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 131 (301)
T d1lufa_ 88 ------------------------------------GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 131 (301)
T ss_dssp ------------------------------------SSSCEEEEECCTTCBHHHHHHHTCC-------------------
T ss_pred ------------------------------------CCceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccc
Confidence 345689999996 69999886432
Q ss_pred ----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCcccc
Q 001059 489 ----HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVD 564 (1170)
Q Consensus 489 ----~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~ 564 (1170)
.+++..++.++.||+.||+|||+++||||||||+|||++.++++||+|||+|+........ ..
T Consensus 132 ~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp~NILld~~~~~Kl~DFGls~~~~~~~~~-------------~~ 198 (301)
T d1lufa_ 132 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYY-------------KA 198 (301)
T ss_dssp ---CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHHHTGGGCB-------------C-
T ss_pred cCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcccceEECCCCcEEEccchhheeccCCccc-------------cc
Confidence 3889999999999999999999999999999999999999999999999999876433211 11
Q ss_pred CcccccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHH
Q 001059 565 GTGQVGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLL 640 (1170)
Q Consensus 565 ~~~~~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI 640 (1170)
.++..||+.|||||.+.+ ..|+.++|||||||++|||++ ||......+...... .+..++.+..+++++.+||
T Consensus 199 ~~~~~~~~~y~aPE~~~~-~~~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~~v~--~~~~~~~p~~~~~~~~~li 275 (301)
T d1lufa_ 199 DGNDAIPIRWMPPESIFY-NRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR--DGNILACPENCPLELYNLM 275 (301)
T ss_dssp ---CCBCGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHHH
T ss_pred cCCCCcCcCcCCHHHHcc-CCCChhhhhccchhhHHHHHccCCCCCCCCCHHHHHHHHH--cCCCCCCCccchHHHHHHH
Confidence 245679999999999988 579999999999999999986 676666665554433 3445555567788999999
Q ss_pred HHccCCCCCCCCCHHHHHhc
Q 001059 641 RRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 641 ~~~L~~dP~~RPta~eiL~~ 660 (1170)
.+||+.||++|||+.+|++.
T Consensus 276 ~~cl~~~P~~RPt~~ev~~~ 295 (301)
T d1lufa_ 276 RLCWSKLPADRPSFCSIHRI 295 (301)
T ss_dssp HHHTCSSGGGSCCHHHHHHH
T ss_pred HHHcCCChhHCcCHHHHHHH
Confidence 99999999999999999763
|
| >d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-jun N-terminal kinase (jnk3s) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.1e-44 Score=411.84 Aligned_cols=260 Identities=27% Similarity=0.365 Sum_probs=203.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|+++++||+|+||+||+|+++.+|+.||||+++....+.....++.+|+.+|++++|||||+++++|...+.
T Consensus 16 ~~~Y~i~~~LG~G~fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~~----- 90 (355)
T d2b1pa1 16 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKT----- 90 (355)
T ss_dssp ETTEEEEEECSCC--CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCS-----
T ss_pred cCCeEEEEEeecCcCeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEecccc-----
Confidence 478999999999999999999999999999999998766666666789999999999999999999999854321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
......+|+|||||.+++.+.+. ..+++..++.++.||+.||+|||++|
T Consensus 91 -----------------------------~~~~~~~~iv~Ey~~~~l~~~~~--~~~~~~~i~~~~~qil~gl~~LH~~g 139 (355)
T d2b1pa1 91 -----------------------------LEEFQDVYLVMELMDANLCQVIQ--MELDHERMSYLLYQMLCGIKHLHSAG 139 (355)
T ss_dssp -----------------------------TTTCCEEEEEEECCSEEHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred -----------------------------cccCceeEEEEeccchHHHHhhh--cCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence 12357899999999988877664 46999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+|++|||+++...... ..+..+||+.|+|||++.+ ..++.++|||
T Consensus 140 iiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~----------------~~~~~~~t~~y~aPE~l~~-~~~~~~~Diw 202 (355)
T d2b1pa1 140 IIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF----------------MMTPYVVTRYYRAPEVILG-MGYKENVDIW 202 (355)
T ss_dssp CCCSCCCGGGEEECTTCCEEECCCCC-------------------------------CCTTCCHHHHTT-CCCCTTHHHH
T ss_pred cccccCCccccccccccceeeechhhhhcccccc----------------ccccccccccccChhhhcC-CCCCCCcccc
Confidence 9999999999999999999999999988653221 2245689999999999988 5789999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC---------------------------------------Ccccc
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP---------------------------------------PSWVA 631 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p---------------------------------------~~~~~ 631 (1170)
|+||++|||++ ||...........+.......+ .....
T Consensus 203 SlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (355)
T d2b1pa1 203 SVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKL 282 (355)
T ss_dssp HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHH
T ss_pred cccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCcccccccccccccccccccccccccc
Confidence 99999999996 7765544333222221111000 00112
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
.++++.+||++||..||++||||+|+|+|||++..
T Consensus 283 ~s~~~~dll~~mL~~dP~~R~ta~elL~Hpw~~~~ 317 (355)
T d2b1pa1 283 KASQARDLLSKMLVIDPAKRISVDDALQHPYINVW 317 (355)
T ss_dssp HHHHHHHHHHHHSCSSTTTSCCHHHHHTSTTTGGG
T ss_pred CCHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence 34578899999999999999999999999999864
|
| >d1kmma2 d.104.1.1 (A:4-325) Histidyl-tRNA synthetase (HisRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Histidyl-tRNA synthetase (HisRS) species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5.5e-44 Score=407.28 Aligned_cols=297 Identities=16% Similarity=0.162 Sum_probs=206.3
Q ss_pred CCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC-C---cccccceEEEeccCCceeeecCCCC
Q 001059 713 RDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD-C---PQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 713 ~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~-~---~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+.++|++|++|.+++++++++++++++|++|||++|+||+| .+... | +...+.+|.|.|.+|+.++||||+|
T Consensus 3 ~~~~G~~D~lp~~~~~~~~i~~~l~~~f~~~Gy~~I~tP~lE~~d~~~~~~g~~~~~~~~~~~~~~d~~g~~l~Lr~D~T 82 (322)
T d1kmma2 3 QAIRGMNDYLPGETAIWQRIEGTLKNVLGSYGYSEIRLPIVEQTPLFKRAIGEVTDVVEKEMYTFEDRNGDSLTLRPEGT 82 (322)
T ss_dssp CCCTTCCCBCHHHHHHHHHHHHHHHHHHHTTTCEECBCCSEEEHHHHHHHHCTTSHHHHHTCEEEECTTSCEEEECSCSH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCeEeECcccccHHHhhcccCcchhhhHHHHhhhhhccccccccccccc
Confidence 35799999999999999999999999999999999999999 22222 2 2346899999999999999999999
Q ss_pred HHHHHHHHhCC---CCceeEEEecCeEEcCCCCCC-CCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEe
Q 001059 785 LPFIRWAISNQ---KSSFKRYEISSVYRRAIGHSP-PNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHL 860 (1170)
Q Consensus 785 ~~iaR~~~~~~---~~P~r~~Y~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~l 860 (1170)
+|+||+++++. ..|.|+||+|+|||+++++.+ .+||+|+|+|+||.++..+|+|+|.++.++|+.+|+.+...+.+
T Consensus 83 ~~iaR~~~~~~~~~~~p~r~~y~g~v~r~~~~~~gr~re~~Q~g~EiiG~~~~~ad~Eii~l~~~~l~~lgl~~~~~~~~ 162 (322)
T d1kmma2 83 AGCVRAGIEHGLLYNQEQRLWYIGPMFRHERPQKGRYRQFHQLGCEVFGLQGPDIDAELIMLTARWWRALGISEHVTLEL 162 (322)
T ss_dssp HHHHHHHHHTTCSTTCCEEEEEEEEEECCCCCBTTBCSEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHTCGGGCEEEE
T ss_pred chhhHHHHhhhhhhhhhhhHhhcccccccCCCCCCccchhhhhhHHHhccccchhHHHHHHHHHHHHHhcCCCceeEEec
Confidence 99999998854 459999999999999888755 45699999999999999999999999999999999986444455
Q ss_pred CcHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHH
Q 001059 861 NHGDLLEAIWSWAGIKAEHREKVAELLAMMGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQAL 940 (1170)
Q Consensus 861 g~~~il~~~l~~lgl~~~~~~~l~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l 940 (1170)
++........ .....+...+.+...... + ....... .+.+..+. ...+......
T Consensus 163 ~~~~~~~~~~-------~~~~~l~~~~~~~~~~l~-----~----~~~~~~~---------~~~~~~l~-~~~~~~~~~~ 216 (322)
T d1kmma2 163 NSIGSLEARA-------NYRDALVAFLEQHKEKLD-----E----DCKRRMY---------TNPLRVLD-SKNPEVQALL 216 (322)
T ss_dssp EECCCHHHHH-------HHHHHHHHHHHHC--------------------------------------------------
T ss_pred cccchHHHHH-------HHHHHHHHHHHHHHHhhh-----H----HHHHHHh---------hhhhhhhh-ccchHHHHHH
Confidence 5533322111 122223333333221100 0 0000000 00011111 0001101111
Q ss_pred HHHhccC-CCChhHHHHHHHH--HHHHccCcceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchh
Q 001059 941 PRLRGAL-PADKPTRKALDEL--YLRIWRIEKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYL 1017 (1170)
Q Consensus 941 ~~l~~~~-~~~~~~~~~l~~L--~l~~~g~~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L 1017 (1170)
..+.... .........+..+ .+...++ .+.+|++++||++||||+||++|+.+.+. .++||+|||||+|
T Consensus 217 ~~~~~~~~~~~~~~~~~l~~~~~~l~~~~i--~~~id~~~~r~~~YYtGivFe~~~~~~g~------~~~i~~GGRYD~L 288 (322)
T d1kmma2 217 NDAPALGDYLDEESREHFAGLCKLLESAGI--AYTVNQRLVRGLDYYNRTVFEWVTNSLGS------QGTVCAGGRYDGL 288 (322)
T ss_dssp ----CGGGTCCHHHHHHHHHHHHHHHHHTC--CEEECTTCCCSSSCCCSEEEEEECTTCSS------SSEEEEEEECTTH
T ss_pred HHHhhcchhhhhHHHHHHHHHHHHhhhcce--eeeeecccccCCCCCCCcEEEEEeCCCCC------cCeeecccchHHH
Confidence 1111110 0122233334444 6666676 58999999999999999999999987542 2479999999999
Q ss_pred hhhcccccccccCCCCCCCCceEEeccHHHHHhhcc
Q 001059 1018 LHRMWDREYVGYASRTNPPSGVGASLALETIIQHYP 1053 (1170)
Q Consensus 1018 ~~~fg~~~~~~~~g~~~~~pAvGfaiglerL~~~L~ 1053 (1170)
+++||++ ++||||||+++|||+.+|+
T Consensus 289 ~~~f~g~----------~~pAvGfsi~ld~l~~~l~ 314 (322)
T d1kmma2 289 VEQLGGR----------ATPAVGFAMGLERLVLLVQ 314 (322)
T ss_dssp HHHTTSC----------CCCEEEEEEEHHHHHHHHH
T ss_pred HHhcCCC----------CCCeEEEEecHHHHHHHHH
Confidence 9999654 3699999999999999886
|
| >d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Protein kinase CK2, alpha subunit species: Rattus norvegicus [TaxId: 10116]
Probab=100.00 E-value=7.5e-44 Score=407.01 Aligned_cols=254 Identities=20% Similarity=0.320 Sum_probs=203.5
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~ 431 (1170)
..++|+++++||+|+||+||+|+++.+|+.||||+++.. ..+++.+|+.+|+.++ ||||++++++|...
T Consensus 33 ~~d~y~i~~~LG~G~fg~V~~a~~~~~~~~vAiK~i~~~-----~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~~----- 102 (328)
T d3bqca1 33 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV-----KKKKIKREIKILENLRGGPNIITLADIVKDP----- 102 (328)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSS-----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECT-----
T ss_pred CCcCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEECHH-----HHHHHHHHHHHHHhccCCCCCcEEEEEEEec-----
Confidence 347899999999999999999999999999999998632 2457889999999995 99999999987431
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
....+|+|||||++ +|... .+.+++..++.++.||+.||+|||
T Consensus 103 ---------------------------------~~~~~~~v~e~~~~~~L~~~---~~~l~e~~i~~i~~qil~aL~~LH 146 (328)
T d3bqca1 103 ---------------------------------VSRTPALVFEHVNNTDFKQL---YQTLTDYDIRFYMYEILKALDYCH 146 (328)
T ss_dssp ---------------------------------TTCSEEEEEECCCSCBGGGT---TTSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------CCCceeEEEeecCCCcHHHH---hcCCCHHHHHHHHHHHHHHHHHHh
Confidence 23568999999975 66654 346999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCC-CEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCcc
Q 001059 511 GQGIIHRDLTPNNIFFDARN-DIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEK 589 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~-~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~k 589 (1170)
++||+||||||+|||++.++ .+||+|||+|+...... .....+||+.|+|||++.+...++.+
T Consensus 147 ~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~----------------~~~~~~~t~~y~aPE~~~~~~~~~~~ 210 (328)
T d3bqca1 147 SMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQ----------------EYNVRVASRYFKGPELLVDYQMYDYS 210 (328)
T ss_dssp HTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTC----------------CCCSCCSCGGGCCHHHHTTCCCCCTH
T ss_pred hcccccccccccceEEcCCCCeeeecccccceeccCCC----------------cccccccCccccCcccccCCCCCCcc
Confidence 99999999999999998765 69999999998653221 12456899999999998886678999
Q ss_pred chhHHHHHHHHHhhc---CCCchhHHH-HHHHHhh-----------h--cC---------------------CCCCcccc
Q 001059 590 ADMYSLGIVFFELWH---PFSTAMERQ-IVLSDLK-----------Q--KG---------------------ELPPSWVA 631 (1170)
Q Consensus 590 sDIwSlGviL~ELlt---Pf~~~~~~~-~~~~~l~-----------~--~~---------------------~~p~~~~~ 631 (1170)
+||||+||++|||++ ||....... ....+.. . .. ........
T Consensus 211 ~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (328)
T d3bqca1 211 LDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHL 290 (328)
T ss_dssp HHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCGGGGGTCCCCCCCCGGGGCCTTTGGG
T ss_pred cchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhcccccCcccchhcccccccchhhccccccccc
Confidence 999999999999996 776433211 1110000 0 00 01112334
Q ss_pred CCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCchH
Q 001059 632 KFSEQESLLRRLMSPSPSDRPSATELLQDALPPQMEY 668 (1170)
Q Consensus 632 ~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~~~ 668 (1170)
.++++.+||++||+.||.+|||++|+|+||||....+
T Consensus 291 ~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~~ 327 (328)
T d3bqca1 291 VSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVVK 327 (328)
T ss_dssp CCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSCC
T ss_pred CCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence 6789999999999999999999999999999987654
|
| >d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Tie2 kinase species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.6e-44 Score=403.32 Aligned_cols=248 Identities=23% Similarity=0.351 Sum_probs=201.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcE--EEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCcc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRH--YAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~--vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~~ 429 (1170)
..++|++.++||+|+||+||+|+++.+|.. ||||+++.. ......+.+.+|+.+|+++ +|||||+++++|.+
T Consensus 8 ~~~~~~~~~~iG~G~fg~Vy~~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~---- 82 (309)
T d1fvra_ 8 DWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY-ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEH---- 82 (309)
T ss_dssp CGGGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC-------CHHHHHHHHHTTCCCCTTBCCEEEEEEE----
T ss_pred CHHHcEEEEEEeeCCCcEEEEEEECCCCeEEEEEEEEECcc-cChHHHHHHHHHHHHHHhccCCCCEeeEEEEEec----
Confidence 357999999999999999999999988875 667776532 2233456799999999999 79999999999853
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------CCCCH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------DHFDK 492 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~~l~e 492 (1170)
...+|+|||||+ |+|.+++... ..+++
T Consensus 83 ------------------------------------~~~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 126 (309)
T d1fvra_ 83 ------------------------------------RGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSS 126 (309)
T ss_dssp ------------------------------------TTEEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCH
T ss_pred ------------------------------------CCeeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCH
Confidence 457899999997 6999998653 46999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCc
Q 001059 493 ELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTY 572 (1170)
Q Consensus 493 ~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~ 572 (1170)
..++.++.||+.||.|||+++|+||||||+|||++.++.+||+|||+|+...... ......||+
T Consensus 127 ~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~a~~~~~~~----------------~~~~~~gt~ 190 (309)
T d1fvra_ 127 QQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYV----------------KKTMGRLPV 190 (309)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEESSCEEC----------------CC----CCT
T ss_pred HHHHHHHHHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccccccccccc----------------cccceecCC
Confidence 9999999999999999999999999999999999999999999999998643221 123457999
Q ss_pred cCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCC
Q 001059 573 FYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSP 648 (1170)
Q Consensus 573 ~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP 648 (1170)
.|+|||.+.+ ..|+.++|||||||++|||++ ||......+.... +. .+..++.+...++++++||.+||+.||
T Consensus 191 ~y~aPE~l~~-~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~-i~-~~~~~~~~~~~~~~~~~li~~cl~~dP 267 (309)
T d1fvra_ 191 RWMAIESLNY-SVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEK-LP-QGYRLEKPLNCDDEVYDLMRQCWREKP 267 (309)
T ss_dssp TTCCHHHHHH-CEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHH-GG-GTCCCCCCTTBCHHHHHHHHHHTCSSG
T ss_pred cccchHHhcc-CCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHH-HH-hcCCCCCCccCCHHHHHHHHHHcCCCh
Confidence 9999999987 579999999999999999986 4554444444433 33 334455556778899999999999999
Q ss_pred CCCCCHHHHHhc
Q 001059 649 SDRPSATELLQD 660 (1170)
Q Consensus 649 ~~RPta~eiL~~ 660 (1170)
++|||+.+|+++
T Consensus 268 ~~RPs~~eil~~ 279 (309)
T d1fvra_ 268 YERPSFAQILVS 279 (309)
T ss_dssp GGSCCHHHHHHH
T ss_pred hHCcCHHHHHHH
Confidence 999999999986
|
| >d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: MAP kinase p38 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=7.3e-44 Score=410.31 Aligned_cols=260 Identities=27% Similarity=0.409 Sum_probs=209.0
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
-++|+++++||+|+||+||+|+++.+|+.||||+++....+....+++.+|+.+|+.++|||||+++++|....
T Consensus 17 ~~rY~i~~~LG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~~------ 90 (348)
T d2gfsa1 17 PERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR------ 90 (348)
T ss_dssp ETTEEEEEECGGGTTSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS------
T ss_pred CCCeEEEEEEecCCCeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeecc------
Confidence 36899999999999999999999999999999999876666666778999999999999999999998874321
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
...+...+|+++++++++|.+++.. +++++.+++.++.||+.||+|||++|
T Consensus 91 ----------------------------~~~~~~~~~i~~~~~gg~L~~~~~~-~~l~e~~~~~i~~qil~aL~~LH~~g 141 (348)
T d2gfsa1 91 ----------------------------SLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHSAD 141 (348)
T ss_dssp ----------------------------STTTCCCCEEEEECCSEEHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ----------------------------ccccCceEEEEEeecCCchhhhccc-ccccHHHHHHHHHHHHHHHHHHHhCC
Confidence 0012234566666567799998854 57999999999999999999999999
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhH
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMY 593 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIw 593 (1170)
|+||||||+|||++.++.+|++|||+|...... ..+..||+.|+|||++.+...++.++|||
T Consensus 142 iiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~------------------~~~~~g~~~y~apE~~~~~~~~~~~~Diw 203 (348)
T d2gfsa1 142 IIHRDLKPSNLAVNEDCELKILDFGLARHTDDE------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIW 203 (348)
T ss_dssp CCCCCCCGGGEEECTTCCEEECCC----CCTGG------------------GSSSCHHHHTSCHHHHTTCSCCCTTHHHH
T ss_pred CcccccCCccccccccccccccccchhcccCcc------------------cccccccccccCchhhcCCccCCcccchh
Confidence 999999999999999999999999999764321 24568999999999988766689999999
Q ss_pred HHHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCC----------------------------CccccCCHHHHHHHHH
Q 001059 594 SLGIVFFELWH---PFSTAMERQIVLSDLKQKGELP----------------------------PSWVAKFSEQESLLRR 642 (1170)
Q Consensus 594 SlGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p----------------------------~~~~~~~~e~~~LI~~ 642 (1170)
||||++|+|++ ||...........+....+..+ ..+...++++.+||++
T Consensus 204 SlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~ 283 (348)
T d2gfsa1 204 SVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEK 283 (348)
T ss_dssp HHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHH
T ss_pred hhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHH
Confidence 99999999996 7876655444433332222111 1123567889999999
Q ss_pred ccCCCCCCCCCHHHHHhccCCCCc
Q 001059 643 LMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 643 ~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
||+.||.+|||++|+|+||||.+.
T Consensus 284 mL~~dP~~R~ta~elL~Hp~f~~~ 307 (348)
T d2gfsa1 284 MLVLDSDKRITAAQALAHAYFAQY 307 (348)
T ss_dssp HSCSSGGGSCCHHHHHTSGGGTTT
T ss_pred HCcCChhhCcCHHHHhcCHhhCCC
Confidence 999999999999999999999875
|
| >d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Carboxyl-terminal src kinase (csk) species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=5.1e-44 Score=395.41 Aligned_cols=241 Identities=24% Similarity=0.382 Sum_probs=194.8
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCC
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~ 433 (1170)
+++|++++.||+|+||.||+|+++ |..||||+++... ..+.+.+|+.+|++++|||||+++++|.+.
T Consensus 6 ~~~~~~~~~lG~G~fg~Vy~~~~~--~~~vAvK~i~~~~----~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~------- 72 (262)
T d1byga_ 6 MKELKLLQTIGKGEFGDVMLGDYR--GNKVAVKCIKNDA----TAQAFLAEASVMTQLRHSNLVQLLGVIVEE------- 72 (262)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET--TEEEEEEECCCCC------HHHHHTHHHHTTCCCTTBCCEEEEECCC-------
T ss_pred HHHeEEeEEEecCCCeEEEEEEEC--CeEEEEEEECcHH----HHHHHHHHHHHHHhCCCCCEeeEEEEEEec-------
Confidence 578999999999999999999985 8899999996432 346799999999999999999999988432
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD--HFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~--~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
...+|+|||||+ |+|.+++.... .+++..++.++.||+.||+|||
T Consensus 73 --------------------------------~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH 120 (262)
T d1byga_ 73 --------------------------------KGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE 120 (262)
T ss_dssp ----------------------------------CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------------------CCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccc
Confidence 244699999996 59999986543 4999999999999999999999
Q ss_pred hCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 511 GQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 511 s~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
+++|+||||||+|||++.++++||+|||+++..... .....+|+.|+|||++.+ ..++.++
T Consensus 121 ~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~------------------~~~~~~~~~y~aPE~l~~-~~~t~~s 181 (262)
T d1byga_ 121 GNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASST------------------QDTGKLPVKWTAPEALRE-KKFSTKS 181 (262)
T ss_dssp HTTCCCSCCSGGGEEECTTSCEEECCCCC------------------------------CCTTTSCHHHHHH-CCCCHHH
T ss_pred cCceeccccchHhheecCCCCEeecccccceecCCC------------------CccccccccCCChHHHhC-CCCChHH
Confidence 999999999999999999999999999999864321 133468999999999987 5799999
Q ss_pred hhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 591 DMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 591 DIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||||||++|||+| ||......+....+ . .+..++.....++++++||++||+.||.+|||+.+++++
T Consensus 182 DIwSfG~il~el~t~~~~p~~~~~~~~~~~~i-~-~~~~~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~~ 253 (262)
T d1byga_ 182 DVWSFGILLWEIYSFGRVPYPRIPLKDVVPRV-E-KGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253 (262)
T ss_dssp HHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHH-T-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHH-H-cCCCCCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHHH
Confidence 99999999999986 55544444433333 2 344455555677899999999999999999999999875
|
| >d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Activated CDC42 kinase 1, ACK1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=9.3e-44 Score=395.85 Aligned_cols=251 Identities=25% Similarity=0.365 Sum_probs=195.7
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccC-C--cEEEEEEEecCCC-ChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLD-G--RHYAVKKIRLKDK-SLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~t-g--~~vAVK~i~~~~~-~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
.++|++++.||+|+||+||+|++..+ + ..||||+++.... .....+.+.+|+.+|++++|||||+++++|.+
T Consensus 7 ~~d~~~~~~iG~G~fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~~---- 82 (273)
T d1u46a_ 7 EKDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLT---- 82 (273)
T ss_dssp GGGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECS----
T ss_pred hHHeEEEEEEecCCCeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEee----
Confidence 36899999999999999999997533 3 3689999875432 33445789999999999999999999998832
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHh-cCCCCHHHHHHHHHHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFES-YDHFDKELAWHLFRQIVEGLA 507 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~ 507 (1170)
..+++|||||+ |++.+.+.. .+.+++..++.++.||+.||+
T Consensus 83 -------------------------------------~~~~lv~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~gl~ 125 (273)
T d1u46a_ 83 -------------------------------------PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125 (273)
T ss_dssp -------------------------------------SSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------cchheeeeeecCcchhhhhhcccCCCCHHHHHHHHHHHHHHHH
Confidence 24589999997 688877654 456999999999999999999
Q ss_pred HHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 508 HIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 508 yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
|||++||+||||||+|||++.++.+||+|||+++.+.... ......+...||+.|+|||++.+ ..++
T Consensus 126 ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~------------~~~~~~~~~~~~~~~~aPE~~~~-~~~~ 192 (273)
T d1u46a_ 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQND------------DHYVMQEHRKVPFAWCAPESLKT-RTFS 192 (273)
T ss_dssp HHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-C------------CEEEC-----CCGGGCCHHHHHH-CEEE
T ss_pred HhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCC------------CcceecCccccCcccCCHHHHhC-CCCC
Confidence 9999999999999999999999999999999998753221 11112234568899999999998 5789
Q ss_pred ccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 588 EKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.++|||||||++|||+| ||......+....+.. .+..++.....++++.+||.+||+.||++|||+.+|+.
T Consensus 193 ~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~-~~~~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~~ 267 (273)
T d1u46a_ 193 HASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDK-EGERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRD 267 (273)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHT-SCCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred cchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHh-CCCCCCCcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence 99999999999999985 8877666666555444 44455556677889999999999999999999999864
|
| >d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Ribosomal protein S6 kinase alpha 5, Msk1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=1.1e-43 Score=404.61 Aligned_cols=263 Identities=25% Similarity=0.401 Sum_probs=211.3
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEc---cCCcEEEEEEEecCCC--ChhhHHHHHHHHHHHHhccC-CCceeEEEEEeec
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNK---LDGRHYAVKKIRLKDK--SLPVNDRILREVATLSRLQH-QHVVRYYQAWFET 426 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~---~tg~~vAVK~i~~~~~--~~~~~~~~~~Ev~iL~~l~H-pnIV~l~~~~~e~ 426 (1170)
.+++|++++.||+|+||+||+|++. .+|+.||||+++.... .....+.+.+|+.+|++++| |||+++++++.+
T Consensus 22 ~l~~y~~~~~IG~G~fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~~~- 100 (322)
T d1vzoa_ 22 GIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT- 100 (322)
T ss_dssp CGGGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEE-
T ss_pred chhceEEEEEEecCCCeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeeecc-
Confidence 4689999999999999999999984 4689999999864321 12234568899999999977 899999988743
Q ss_pred CccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHH
Q 001059 427 GVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEG 505 (1170)
Q Consensus 427 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~g 505 (1170)
...+|++||||. ++|.+.+...+.+++..++.++.||+.|
T Consensus 101 ---------------------------------------~~~~~~v~e~~~~~~L~~~i~~~~~~~e~~~~~~~~Qi~~a 141 (322)
T d1vzoa_ 101 ---------------------------------------ETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLA 141 (322)
T ss_dssp ---------------------------------------TTEEEEEECCCCSCBHHHHHHHHSCCCHHHHHHHHHHHHHH
T ss_pred ---------------------------------------CCceeeeeecccccHHHHHHHhcccccHHHHHHHHHHHHHH
Confidence 457899999996 5999999999999999999999999999
Q ss_pred HHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCC-
Q 001059 506 LAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWP- 584 (1170)
Q Consensus 506 L~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~- 584 (1170)
|+|||++||+||||||+|||++.++.+||+|||+|+.+..... ....+..||+.|+|||.+.+..
T Consensus 142 l~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~--------------~~~~~~~g~~~~~~pe~~~~~~~ 207 (322)
T d1vzoa_ 142 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADET--------------ERAYDFCGTIEYMAPDIVRGGDS 207 (322)
T ss_dssp HHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGG--------------GGGCGGGSCCTTCCHHHHTTCC-
T ss_pred HHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhccccc--------------ccccccccccccchhHHhhcCCc
Confidence 9999999999999999999999999999999999986543221 1123468999999999997643
Q ss_pred CCCccchhHHHHHHHHHhhc---CCCchhHHHHHHHHhhhc-CCCCCccccCCHHHHHHHHHccCCCCCCCC-----CHH
Q 001059 585 KIDEKADMYSLGIVFFELWH---PFSTAMERQIVLSDLKQK-GELPPSWVAKFSEQESLLRRLMSPSPSDRP-----SAT 655 (1170)
Q Consensus 585 ~~~~ksDIwSlGviL~ELlt---Pf~~~~~~~~~~~~l~~~-~~~p~~~~~~~~e~~~LI~~~L~~dP~~RP-----ta~ 655 (1170)
.++.++|||||||+||||++ ||................ ...++.+...++++.+||++||++||.+|| |++
T Consensus 208 ~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~ 287 (322)
T d1vzoa_ 208 GHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDAD 287 (322)
T ss_dssp --CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHH
T ss_pred CCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCCcccCCHHHHHHHHHHcccCHHHcCCCCcccHH
Confidence 47889999999999999997 886543322211111111 112233345788999999999999999999 589
Q ss_pred HHHhccCCCCchHH
Q 001059 656 ELLQDALPPQMEYE 669 (1170)
Q Consensus 656 eiL~~~~~~~~~~~ 669 (1170)
|+++||||++..++
T Consensus 288 eil~Hpff~~i~~~ 301 (322)
T d1vzoa_ 288 EIKEHLFFQKINWD 301 (322)
T ss_dssp HHHTSGGGTTCCHH
T ss_pred HHHcCHhhcCCCHH
Confidence 99999999987654
|
| >d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Hepatocyte growth factor receptor, c-MET species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2e-42 Score=392.22 Aligned_cols=248 Identities=21% Similarity=0.262 Sum_probs=197.1
Q ss_pred EeeeccCCcEEEEEEEEccCC---cEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCCCC
Q 001059 360 LQPLGHGGFGHVVLCKNKLDG---RHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGDSM 436 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg---~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~~~ 436 (1170)
.++||+|+||+||+|++..++ ..||||+++. ..+.....++.+|+.+|++++|||||+++++|.+.
T Consensus 32 ~~~iG~G~fg~Vyk~~~~~~~~~~~~vAvK~~~~-~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~~---------- 100 (311)
T d1r0pa_ 32 NEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNR-ITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS---------- 100 (311)
T ss_dssp EEEEEEETTEEEEEEEECC----CEEEEEEEECC-CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEET----------
T ss_pred ceEEeecCCeEEEEEEEECCCCEEEEEEEEEECc-ccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEec----------
Confidence 578999999999999987543 3699999863 33455567899999999999999999999988542
Q ss_pred CCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhCCc
Q 001059 437 WGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQGI 514 (1170)
Q Consensus 437 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~gI 514 (1170)
...+++|||||+ ++|.+++.... .+++..+..++.||+.||.|||+++|
T Consensus 101 -----------------------------~~~~~lv~E~~~~g~l~~~~~~~~~~~~~~~~~~i~~qia~gL~~lH~~~i 151 (311)
T d1r0pa_ 101 -----------------------------EGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKF 151 (311)
T ss_dssp -----------------------------TTEEEEEEECCTTCBHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred -----------------------------CCceEEEEEEeecCchhhhhccccccchHHHHHHHHHHHHHhhhhhcccCc
Confidence 346899999997 58888877543 57888999999999999999999999
Q ss_pred cccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccchhHH
Q 001059 515 IHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKADMYS 594 (1170)
Q Consensus 515 iHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ksDIwS 594 (1170)
+||||||+|||+++++.+||+|||+++......... ........||+.|+|||.+.+ ..++.++||||
T Consensus 152 iHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~-----------~~~~~~~~gt~~y~aPE~~~~-~~~~~ksDI~S 219 (311)
T d1r0pa_ 152 VHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDS-----------VHNKTGAKLPVKWMALESLQT-QKFTTKSDVWS 219 (311)
T ss_dssp CCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCC-----------TTCTTCSSCCGGGSCHHHHHH-CCCCHHHHHHH
T ss_pred ccCCccHHhEeECCCCCEEEecccchhhcccccccc-----------ceecccccccccccChHHHhc-CCCCChhHhhh
Confidence 999999999999999999999999998764322111 112244579999999999987 57999999999
Q ss_pred HHHHHHHhhc---CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHhc
Q 001059 595 LGIVFFELWH---PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 595 lGviL~ELlt---Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
|||++|||++ ||............+. .+..+.....+++++.+||.+||+.||++|||+.||+++
T Consensus 220 fGivl~El~t~~~p~~~~~~~~~~~~~i~-~g~~~~~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~ 287 (311)
T d1r0pa_ 220 FGVLLWELMTRGAPPYPDVNTFDITVYLL-QGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR 287 (311)
T ss_dssp HHHHHHHHHTTSCCSCC------CHHHHH-TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred hHHHHHHHHHCCCCCCCCCCHHHHHHHHH-cCCCCCCcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence 9999999997 6655443333223222 334444445677899999999999999999999999986
|
| >d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Fibroblast growth factor receptor 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.4e-42 Score=389.61 Aligned_cols=250 Identities=23% Similarity=0.363 Sum_probs=200.5
Q ss_pred cCCceEEeeeccCCcEEEEEEEEccCC-------cEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEee
Q 001059 354 LNDFEELQPLGHGGFGHVVLCKNKLDG-------RHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFE 425 (1170)
Q Consensus 354 ~~~y~~~~~LG~G~fG~Vyka~~~~tg-------~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e 425 (1170)
.++|++.+.||+|+||.||+|++..++ ..||||+++.. ........+.+|+..++++ +|||||+++++|.+
T Consensus 12 ~~~~~l~~~iG~G~fg~Vy~~~~~~~~~~~~~~~~~vAvK~~~~~-~~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~~~ 90 (299)
T d1fgka_ 12 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSD-ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQ 90 (299)
T ss_dssp GGGEEEEEECC-----CEEEEEEECC----CCCEEEEEEECCCTT-CCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred HHHeEEeeEEeecCCcEEEEEEEcCCCcccccCceEEEEEEECcc-cChHHHHHHHHHHHHHHHhcCCCeEEeccccccc
Confidence 378999999999999999999987554 47999998743 3444567889999999888 89999999999843
Q ss_pred cCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------------C
Q 001059 426 TGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------------D 488 (1170)
Q Consensus 426 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------------~ 488 (1170)
...+|+|||||. |+|.+++... .
T Consensus 91 ----------------------------------------~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~ 130 (299)
T d1fgka_ 91 ----------------------------------------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEE 130 (299)
T ss_dssp ----------------------------------------SSSCEEEECCCTTCBHHHHHHTTSCC------------CC
T ss_pred ----------------------------------------CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccc
Confidence 345799999996 6999998654 3
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCccc
Q 001059 489 HFDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQ 568 (1170)
Q Consensus 489 ~l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 568 (1170)
.+++.+++.++.||+.||+|||+++||||||||+|||++.++.+||+|||+++....... .......
T Consensus 131 ~l~~~~~~~~~~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~-------------~~~~~~~ 197 (299)
T d1fgka_ 131 QLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDY-------------YKKTTNG 197 (299)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCT-------------TCCCTTS
T ss_pred cCCHHHHHHHHHHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhcccccccc-------------ccccccC
Confidence 489999999999999999999999999999999999999999999999999987643221 1122446
Q ss_pred ccCccCCCcccccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHcc
Q 001059 569 VGTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLM 644 (1170)
Q Consensus 569 ~GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L 644 (1170)
.||+.|+|||.+.+ ..|+.++|||||||++|||++ ||......+. ...+. .+..++.+...++++.+||.+||
T Consensus 198 ~~~~~y~aPE~l~~-~~y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~-~~~i~-~~~~~~~p~~~~~~l~~li~~cl 274 (299)
T d1fgka_ 198 RLPVKWMAPEALFD-RIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEEL-FKLLK-EGHRMDKPSNCTNELYMMMRDCW 274 (299)
T ss_dssp CCGGGGSCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHH-HHHHH-TTCCCCCCSSCCHHHHHHHHHHT
T ss_pred CCChhhhhhhHhcC-CCCCchhhhHHhHHHHHHhccCCCCCCCCCCHHHH-HHHHH-cCCCCCCCccchHHHHHHHHHHc
Confidence 79999999999987 579999999999999999985 5654444433 33333 34445555677889999999999
Q ss_pred CCCCCCCCCHHHHHhc
Q 001059 645 SPSPSDRPSATELLQD 660 (1170)
Q Consensus 645 ~~dP~~RPta~eiL~~ 660 (1170)
+.||.+|||+.+|++.
T Consensus 275 ~~dP~~Rps~~eil~~ 290 (299)
T d1fgka_ 275 HAVPSQRPTFKQLVED 290 (299)
T ss_dssp CSSGGGSCCHHHHHHH
T ss_pred cCCHhHCcCHHHHHHH
Confidence 9999999999999974
|
| >d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: c-KIT receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=2.2e-42 Score=392.06 Aligned_cols=249 Identities=24% Similarity=0.296 Sum_probs=203.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEc-----cCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhc-cCCCceeEEEEEeecCc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNK-----LDGRHYAVKKIRLKDKSLPVNDRILREVATLSRL-QHQHVVRYYQAWFETGV 428 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~-----~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l-~HpnIV~l~~~~~e~~~ 428 (1170)
++|++.++||+|+||+||+|+++ .+++.||||+++... .......+.+|+.+++.+ +|||||+++++|.+
T Consensus 23 ~~~~l~~~iG~G~fg~Vy~a~~~~~~~~~~~~~vAvK~i~~~~-~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~~~--- 98 (311)
T d1t46a_ 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSA-HLTEREALMSELKVLSYLGNHMNIVNLLGACTI--- 98 (311)
T ss_dssp GGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTC-CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS---
T ss_pred HHeEEeeEEeecCCeEEEEEEEeccccCCCCeEEEEEEECccc-CHHHHHHHHHHHHHHHhccCCCCEEEEEEEEee---
Confidence 79999999999999999999974 456799999997543 344556799999999999 79999999999833
Q ss_pred cccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcC------------------C
Q 001059 429 ADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYD------------------H 489 (1170)
Q Consensus 429 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~------------------~ 489 (1170)
...+|++||||+ |+|.+++.... .
T Consensus 99 -------------------------------------~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~ 141 (311)
T d1t46a_ 99 -------------------------------------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELA 141 (311)
T ss_dssp -------------------------------------SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CC
T ss_pred -------------------------------------CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccC
Confidence 345799999997 58999886532 4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccc
Q 001059 490 FDKELAWHLFRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQV 569 (1170)
Q Consensus 490 l~e~~~~~i~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 569 (1170)
+++..+..++.||+.||+|||++|||||||||+|||++.++.+||+|||+++...... .....+..+
T Consensus 142 l~~~~~~~~~~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~-------------~~~~~~~~~ 208 (311)
T d1t46a_ 142 LDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS-------------NYVVKGNAR 208 (311)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCT-------------TSEECSSSE
T ss_pred CCHHHHHHHHHHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCC-------------cceEeeecc
Confidence 8999999999999999999999999999999999999999999999999998653211 112234568
Q ss_pred cCccCCCcccccCCCCCCccchhHHHHHHHHHhhc---C-CCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccC
Q 001059 570 GTYFYTAPEIEQGWPKIDEKADMYSLGIVFFELWH---P-FSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMS 645 (1170)
Q Consensus 570 GT~~Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---P-f~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~ 645 (1170)
||+.|+|||++.+ ..++.++|||||||++|||+| | |......+.....+. .+..+......++++.+||.+||+
T Consensus 209 gt~~y~aPE~~~~-~~~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~-~~~~~~~~~~~~~~l~~Li~~cl~ 286 (311)
T d1t46a_ 209 LPVKWMAPESIFN-CVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIK-EGFRMLSPEHAPAEMYDIMKTCWD 286 (311)
T ss_dssp ECGGGCCHHHHHH-CCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHH-HTCCCCCCTTSCHHHHHHHHHHTC
T ss_pred cChHHcCHHHhcC-CCCCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHh-cCCCCCCcccccHHHHHHHHHHcC
Confidence 9999999999987 578999999999999999996 4 434333343444443 333444445667899999999999
Q ss_pred CCCCCCCCHHHHHh
Q 001059 646 PSPSDRPSATELLQ 659 (1170)
Q Consensus 646 ~dP~~RPta~eiL~ 659 (1170)
.||.+|||+++|++
T Consensus 287 ~dP~~RPs~~~il~ 300 (311)
T d1t46a_ 287 ADPLKRPTFKQIVQ 300 (311)
T ss_dssp SSGGGSCCHHHHHH
T ss_pred CChhHCcCHHHHHH
Confidence 99999999999996
|
| >d1usya_ d.104.1.1 (A:) ATP phosphoribosyltransferase regulatory subunit HisZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: ATP phosphoribosyltransferase regulatory subunit HisZ species: Thermotoga maritima [TaxId: 2336]
Probab=100.00 E-value=2.3e-42 Score=384.35 Aligned_cols=261 Identities=18% Similarity=0.203 Sum_probs=201.0
Q ss_pred hHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCC-CCceeEEEecCeEE
Q 001059 731 YVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQ-KSSFKRYEISSVYR 809 (1170)
Q Consensus 731 ~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~-~~P~r~~Y~g~VfR 809 (1170)
++.. +.+++.++||++|.||+|+.... ..... |.|++|+.|+||||+|+|+||+++++. ..|.|+||+|+|||
T Consensus 8 k~~s-f~~~~~~~Gy~~i~tP~~E~~e~---~~~~~--F~D~~g~~l~LRpD~T~~iaR~~~~~~~~~p~k~~Y~g~VfR 81 (275)
T d1usya_ 8 KVFS-FYSKATKKGFSPFFVPALEKAEE---PAGNF--FLDRKGNLFSIREDFTKTVLNHRKRYSPDSQIKVWYADFVYR 81 (275)
T ss_dssp HHHH-HHHHHHHTTCEECCCCSEEECSS---CCSSC--EEETTSCEEEECCCHHHHHHHHHTTCTTCCCEEEECCEEEEE
T ss_pred HHHH-HHHHHHHcCCceeecCccccccc---cccce--eEcCCCCEEEECCCCcHHHHHHHHHcCCCCCeeeeEEeeEEE
Confidence 4444 55677899999999999955432 11222 789999999999999999999998754 45999999999999
Q ss_pred cCCCCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCCcceEEEeCcHHHHHHHHHHhCCCHHHHHHHHHHHHH
Q 001059 810 RAIGHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHAESCDIHLNHGDLLEAIWSWAGIKAEHREKVAELLAM 889 (1170)
Q Consensus 810 ~e~~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~~~~~i~lg~~~il~~~l~~lgl~~~~~~~l~~~l~~ 889 (1170)
+++++ .+||+|+|+|+||.+++.+|+|||.++.++|+.+|+++ ++|+|||+++++.+++. ++.+.++++..++++
T Consensus 82 ~~~~~--~re~~Q~G~EiiG~~~~~aD~Evi~l~~~~l~~lgi~~-~~i~l~~~~i~~~ll~~--l~~~~~~~l~~~l~~ 156 (275)
T d1usya_ 82 YSGSD--LVAEYQLGLEKVPRNSLDDSLEVLEIIVESASEFFEGP-VIVEIGHTGVYEDLLKE--IPKDLHEKVLNLIDT 156 (275)
T ss_dssp EETTE--EEEEEEEEEEEESCCSHHHHHHHHHHHHHHHHHHCCSC-EEEEEEETTHHHHHHTT--SCGGGHHHHHHHHHT
T ss_pred eCCCc--ccceeecCceeechhhHHHHHHHHHHHHHHHHhhcccc-cEEEecCcchHHHHhhh--ccchHHHHHHHHHHh
Confidence 97654 57899999999999999999999999999999999986 99999999999999985 455666778888887
Q ss_pred hcCCCCCcccccchHHHHHHHHHHHcCCcHHHHHHHHHHHHHhcCChhhHHHHHhccCCCChhHHHHHHHH--HHHHccC
Q 001059 890 MGSLRPQSSEWKSKWVVIRRQLLQELNLAEAVVNRLQTVGLRFCGAADQALPRLRGALPADKPTRKALDEL--YLRIWRI 967 (1170)
Q Consensus 890 ~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~l~~~~~g~~~~~l~~l~~~~~~~~~~~~~l~~L--~l~~~g~ 967 (1170)
++. .++ +.+....+++......+.... .+.+..+ .+ .. ........+.+.++ .++..+.
T Consensus 157 k~~------------~~l-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~l---~~-~~~~~~~~~~L~~~~~~l~~~~~ 217 (275)
T d1usya_ 157 KNL------------AEI-EFLSHMKKIDLSRVEKIIEDS-IYRRSPE-HL---KT-MDLPLSVREDLLSASSFLQEKFP 217 (275)
T ss_dssp TCH------------HHH-HHHHHHTCCCCTHHHHHHHHH-HHCCSGG-GG---GT-SCCCHHHHHHHHHHHHHHHHHCS
T ss_pred cch------------hhH-HHHHhhcCCCHHHHHHHhhhh-hhccChh-hh---hh-hHHHHHHHHHHHHHHHHHHhhCC
Confidence 662 112 344444566666666666655 3444421 11 11 12223334444444 6677777
Q ss_pred cceEEEccCCCCCCCcccceEEEEEeccCCCcccccccceeccccccchhhhhcccccccccCCCCCCCCceEEeccHH
Q 001059 968 EKNIYIDALMPPIESYHRNLFFQVFSVKEKYPATLVEGTLLAVGGRYDYLLHRMWDREYVGYASRTNPPSGVGASLALE 1046 (1170)
Q Consensus 968 ~~~i~~Dl~lvrgldYYtG~VFe~~~~~~~~~~~~~~~~~I~~GGRYD~L~~~fg~~~~~~~~g~~~~~pAvGfaigle 1046 (1170)
..+|.||++++|+++||||+||++|..+.+. +||+|||||.|.+ +|||||+++|
T Consensus 218 ~~~i~~D~~~~rgldYYtGivFe~~~~~~~~--------~I~~GGRYD~l~e-----------------~~~G~si~ld 271 (275)
T d1usya_ 218 TVSVEIDLTLARTIEEYCGLIFTIYDTSSSR--------LVAAGGEYTVNGE-----------------KGVGGSIFLE 271 (275)
T ss_dssp SSEEEECCCCGGGGGTCSSEEEEEEETTTTE--------EEEEEEEEEETTE-----------------EEEEEEEEEE
T ss_pred CceEEEcccccCCCcccCCeEEEEEECCCCC--------eEEecccccCCCC-----------------EeeeEEEEee
Confidence 7789999999999999999999999887553 7999999998822 6999999976
|
| >d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Insulin-like growth factor 1 receptor species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=4.3e-42 Score=389.09 Aligned_cols=249 Identities=21% Similarity=0.288 Sum_probs=205.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEcc-----CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCcc
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKL-----DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVA 429 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~-----tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~ 429 (1170)
++|++.+.||+|+||+||+|.++. ++..||||+++.. ........+.+|+.++++++|||||+++++|..
T Consensus 20 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~-~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~---- 94 (308)
T d1p4oa_ 20 EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEA-ASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQ---- 94 (308)
T ss_dssp GGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTT-SCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECS----
T ss_pred HHeEEeeEEeeCCCeEEEEEEECCcccCCCCcEEEEEEECcc-cChHHHHHHHHHHHHHHHcCCCCEeeeeeEEec----
Confidence 789999999999999999999863 3578999998743 344455678999999999999999999998832
Q ss_pred ccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhc----------CCCCHHHHHHH
Q 001059 430 DFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESY----------DHFDKELAWHL 498 (1170)
Q Consensus 430 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~----------~~l~e~~~~~i 498 (1170)
...+++|||||+ |+|.+++... ..+++..+..+
T Consensus 95 ------------------------------------~~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i 138 (308)
T d1p4oa_ 95 ------------------------------------GQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQM 138 (308)
T ss_dssp ------------------------------------SSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHH
T ss_pred ------------------------------------CCceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHH
Confidence 345699999996 6898887542 23688999999
Q ss_pred HHHHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcc
Q 001059 499 FRQIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPE 578 (1170)
Q Consensus 499 ~~qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE 578 (1170)
+.||++||.|||+++|+||||||+|||++.++++||+|||+|+....... .......+||+.|+|||
T Consensus 139 ~~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~~~~~~-------------~~~~~~~~~t~~y~aPe 205 (308)
T d1p4oa_ 139 AGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDY-------------YRKGGKGLLPVRWMSPE 205 (308)
T ss_dssp HHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGC-------------EEGGGSSEECGGGCCHH
T ss_pred HHHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceeccCCcc-------------eeeccceecccccCCHH
Confidence 99999999999999999999999999999999999999999987643321 11234457999999999
Q ss_pred cccCCCCCCccchhHHHHHHHHHhhc----CCCchhHHHHHHHHhhhcCCCCCccccCCHHHHHHHHHccCCCCCCCCCH
Q 001059 579 IEQGWPKIDEKADMYSLGIVFFELWH----PFSTAMERQIVLSDLKQKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSA 654 (1170)
Q Consensus 579 ~l~~~~~~~~ksDIwSlGviL~ELlt----Pf~~~~~~~~~~~~l~~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta 654 (1170)
.+.+ ..++.++|||||||++|||+| ||......+....+. .+..++....+++.+.+||.+||+.||++|||+
T Consensus 206 ~l~~-~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~--~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~ 282 (308)
T d1p4oa_ 206 SLKD-GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVM--EGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSF 282 (308)
T ss_dssp HHHH-CCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHH--TTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCH
T ss_pred HHcc-CCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHH--hCCCCCCcccchHHHHHHHHHHcCCChhHCcCH
Confidence 9988 578999999999999999985 666555555544433 344455556677899999999999999999999
Q ss_pred HHHHhc
Q 001059 655 TELLQD 660 (1170)
Q Consensus 655 ~eiL~~ 660 (1170)
.+|+++
T Consensus 283 ~~il~~ 288 (308)
T d1p4oa_ 283 LEIISS 288 (308)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999974
|
| >d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=100.00 E-value=4.7e-41 Score=378.72 Aligned_cols=253 Identities=23% Similarity=0.245 Sum_probs=195.5
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCceeEEEEEeecCccccCCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVVRYYQAWFETGVADFDGD 434 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~~~ 434 (1170)
++|++.+.||+|+||+||+|+++.+|+.||||++...... .++.+|+.+++.++|+|++..+..+..
T Consensus 7 ~rY~l~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~E~~i~~~l~~~~~i~~~~~~~~--------- 73 (299)
T d1ckia_ 7 NRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKH----PQLHIESKIYKMMQGGVGIPTIRWCGA--------- 73 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEESCTTS----CCHHHHHHHHHHSTTSTTCCCEEEEEE---------
T ss_pred CEEEEeEEEeeCCCcEEEEEEECCCCCEEEEEEEchhccC----HHHHHHHHHHHHccCCCcccEEEEEEe---------
Confidence 5799999999999999999999999999999998764332 347889999999988877666555432
Q ss_pred CCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCC
Q 001059 435 SMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFES-YDHFDKELAWHLFRQIVEGLAHIHGQG 513 (1170)
Q Consensus 435 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~-~~~l~e~~~~~i~~qI~~gL~yLHs~g 513 (1170)
.....++|||||++++.+.+.. ...+++..+..++.||+.||+|||++|
T Consensus 74 ------------------------------~~~~~~ivme~~~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ 123 (299)
T d1ckia_ 74 ------------------------------EGDYNVMVMELLGPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKN 123 (299)
T ss_dssp ------------------------------ETTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred ------------------------------cCCEEEEEEEEcCCchhhhhhhccCCCcHHHHHHHHHHHHHHHHHHHHCC
Confidence 2457899999999988777654 457999999999999999999999999
Q ss_pred ccccCCCCCceeecC---CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCCccc
Q 001059 514 IIHRDLTPNNIFFDA---RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKIDEKA 590 (1170)
Q Consensus 514 IiHrDLKp~NILi~~---~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~ks 590 (1170)
||||||||+|||++. +..+||+|||+|+.+........ .........+||+.|||||++.+ ..++.++
T Consensus 124 iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~--------~~~~~~~~~~gt~~y~aPE~~~~-~~~~~~~ 194 (299)
T d1ckia_ 124 FIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH--------IPYRENKNLTGTARYASINTHLG-IEQSRRD 194 (299)
T ss_dssp EECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCB--------CCCCBCCSCCCCSSSCCHHHHTT-BCCCHHH
T ss_pred eeeccCCHhhccccccCCCceeeeeccCcceeccccccccc--------eeccccCCcCCCccccCHHHHhC-CCCCChh
Confidence 999999999999864 45799999999997653321110 01122355689999999999998 5689999
Q ss_pred hhHHHHHHHHHhhc---CCCchhHHHHHHHH---hhh--cCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 591 DMYSLGIVFFELWH---PFSTAMERQIVLSD---LKQ--KGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 591 DIwSlGviL~ELlt---Pf~~~~~~~~~~~~---l~~--~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
|||||||++|||++ ||............ ... ....+......++++.+||.+||+.||++||++.++.+
T Consensus 195 DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~ 271 (299)
T d1ckia_ 195 DLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ 271 (299)
T ss_dssp HHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHH
T ss_pred hEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhcccCCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence 99999999999997 88654333222111 111 11112233456789999999999999999999987754
|
| >d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Type I TGF-beta receptor R4 species: Human (Homo sapiens) [TaxId: 9606]
Probab=100.00 E-value=8.8e-41 Score=377.34 Aligned_cols=251 Identities=23% Similarity=0.313 Sum_probs=187.4
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHH--HHHHHHHhccCCCceeEEEEEeecCccccC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRIL--REVATLSRLQHQHVVRYYQAWFETGVADFD 432 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~--~Ev~iL~~l~HpnIV~l~~~~~e~~~~~~~ 432 (1170)
++|.+.+.||+|+||+||+|++ +|+.||||+++... ...+. +|+..++.++|||||+++++|.+.+
T Consensus 3 ~~~~l~~~iG~G~fg~Vy~~~~--~g~~vAvK~~~~~~-----~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~~----- 70 (303)
T d1vjya_ 3 RTIVLQESIGKGRFGEVWRGKW--RGEEVAVKIFSSRE-----ERSWFREAEIYQTVMLRHENILGFIAADNKDN----- 70 (303)
T ss_dssp GGEEEEEEEECCSSSEEEEEEE--TTEEEEEEEECGGG-----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC-----
T ss_pred cEEEEEEEEeeCCCeEEEEEEE--CCEEEEEEEECccc-----hhHHHHHHHHHHHhhCCCCcCcceEEEEEeCC-----
Confidence 5788999999999999999987 58999999986432 23333 4555566789999999999986531
Q ss_pred CCCCCCCCcccccccccccccccccccccccccccEEEEEeeccC-CcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh
Q 001059 433 GDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCP-RTLRQVFESYDHFDKELAWHLFRQIVEGLAHIHG 511 (1170)
Q Consensus 433 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~-gsL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLHs 511 (1170)
.....+|+|||||+ |+|.+++++. .+++...+.++.|++.||+|||+
T Consensus 71 -------------------------------~~~~~~~lv~Ey~~~g~L~~~l~~~-~l~~~~~~~~~~~ia~gl~~lH~ 118 (303)
T d1vjya_ 71 -------------------------------GTWTQLWLVSDYHEHGSLFDYLNRY-TVTVEGMIKLALSTASGLAHLHM 118 (303)
T ss_dssp -------------------------------SSSEEEEEEEECCTTCBHHHHHHHC-CBCHHHHHHHHHHHHHHHHHHHC
T ss_pred -------------------------------CcceEEEEEEecccCCCHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHH
Confidence 12357899999996 6999999764 69999999999999999999996
Q ss_pred --------CCccccCCCCCceeecCCCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCC
Q 001059 512 --------QGIIHRDLTPNNIFFDARNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGW 583 (1170)
Q Consensus 512 --------~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~ 583 (1170)
+|||||||||+||||+.++.+||+|||+++........ ........+||+.|||||++.+.
T Consensus 119 ~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~-----------~~~~~~~~~gt~~y~aPE~~~~~ 187 (303)
T d1vjya_ 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDT-----------IDIAPNHRVGTKRYMAPEVLDDS 187 (303)
T ss_dssp CBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTE-----------ECC----CCSCGGGCCHHHHTTC
T ss_pred hhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcc-----------eeccccceecccCcCChhhcccc
Confidence 59999999999999999999999999999876432211 11123456899999999998763
Q ss_pred C-----CCCccchhHHHHHHHHHhhc---CCCch--------------hHHHHHHHHhhhcCC---CCCcccc--CCHHH
Q 001059 584 P-----KIDEKADMYSLGIVFFELWH---PFSTA--------------MERQIVLSDLKQKGE---LPPSWVA--KFSEQ 636 (1170)
Q Consensus 584 ~-----~~~~ksDIwSlGviL~ELlt---Pf~~~--------------~~~~~~~~~l~~~~~---~p~~~~~--~~~e~ 636 (1170)
. .++.++|||||||+||||+| ||... ............... +|..+.. ....+
T Consensus 188 ~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l 267 (303)
T d1vjya_ 188 INMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVM 267 (303)
T ss_dssp SCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHH
T ss_pred ccccCCCcCcchhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHH
Confidence 2 25678999999999999996 33210 011112222222222 2222211 22358
Q ss_pred HHHHHHccCCCCCCCCCHHHHHhc
Q 001059 637 ESLLRRLMSPSPSDRPSATELLQD 660 (1170)
Q Consensus 637 ~~LI~~~L~~dP~~RPta~eiL~~ 660 (1170)
.+|+.+||+.||.+|||+.||+++
T Consensus 268 ~~li~~cl~~dp~~Rps~~ei~~~ 291 (303)
T d1vjya_ 268 AKIMRECWYANGAARLTALRIKKT 291 (303)
T ss_dssp HHHHHTTCCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHcccCHhHCcCHHHHHHH
Confidence 899999999999999999999875
|
| >d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Casein kinase-1, CK1 species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
Probab=100.00 E-value=8.6e-40 Score=367.47 Aligned_cols=252 Identities=18% Similarity=0.214 Sum_probs=197.6
Q ss_pred CCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccC-CCceeEEEEEeecCccccCC
Q 001059 355 NDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQH-QHVVRYYQAWFETGVADFDG 433 (1170)
Q Consensus 355 ~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~H-pnIV~l~~~~~e~~~~~~~~ 433 (1170)
++|++.+.||+|+||+||+|+++.+|+.||||+++..... ..+.+|+..++.++| +||+.+++++.+
T Consensus 5 ~~Y~i~~~iG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~----~~~~~e~~~~~~l~~~~~i~~~~~~~~~-------- 72 (293)
T d1csna_ 5 VHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDA----PQLRDEYRTYKLLAGCTGIPNVYYFGQE-------- 72 (293)
T ss_dssp TTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCTTS----CCHHHHHHHHHHTTTCTTCCCEEEEEEE--------
T ss_pred CceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEccccCc----HHHHHHHHHHHHhcCCCCCCEEEEEeec--------
Confidence 5799999999999999999999999999999998754322 346789999999965 899999877632
Q ss_pred CCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhC
Q 001059 434 DSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYD-HFDKELAWHLFRQIVEGLAHIHGQ 512 (1170)
Q Consensus 434 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~-~l~e~~~~~i~~qI~~gL~yLHs~ 512 (1170)
....|+|||||+++|.+++...+ .++...+..++.|++.||+|||++
T Consensus 73 --------------------------------~~~~~~vme~~~~~l~~~~~~~~~~~~~~~~~~i~~q~~~~l~~lH~~ 120 (293)
T d1csna_ 73 --------------------------------GLHNVLVIDLLGPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEK 120 (293)
T ss_dssp --------------------------------TTEEEEEEECCCCBHHHHHHHTTTCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred --------------------------------CCccEEEEEecCCCHHHHHHhhccchhhHHHHHHHHHHHHHHHHHHHC
Confidence 45679999999999999887654 699999999999999999999999
Q ss_pred CccccCCCCCceeecC-----CCCEEEeecCcchhccccccccCCCCCCCCCCccccCcccccCccCCCcccccCCCCCC
Q 001059 513 GIIHRDLTPNNIFFDA-----RNDIKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYFYTAPEIEQGWPKID 587 (1170)
Q Consensus 513 gIiHrDLKp~NILi~~-----~~~vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~ 587 (1170)
||+||||||+|||++. ++.+||+|||+|+.+........ .......+.+||+.|||||++.+ ..++
T Consensus 121 giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~--------~~~~~~~~~~GT~~y~aPE~~~~-~~~~ 191 (293)
T d1csna_ 121 SLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQH--------IPYREKKNLSGTARYMSINTHLG-REQS 191 (293)
T ss_dssp TEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCB--------CCCCCCCCCCSCTTTCCHHHHTT-CCCC
T ss_pred CceeccCCccceeecCcccccCCceEEcccceeEEcccCccccc--------eeecccCceEEchhhcCHHHhcC-CCCC
Confidence 9999999999999974 57899999999987643221110 00112345689999999999998 5699
Q ss_pred ccchhHHHHHHHHHhhc---CCCchh---HHHHHHHHhh--hcCCCCCccccCCHHHHHHHHHccCCCCCCCCCHHHHHh
Q 001059 588 EKADMYSLGIVFFELWH---PFSTAM---ERQIVLSDLK--QKGELPPSWVAKFSEQESLLRRLMSPSPSDRPSATELLQ 659 (1170)
Q Consensus 588 ~ksDIwSlGviL~ELlt---Pf~~~~---~~~~~~~~l~--~~~~~p~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~ 659 (1170)
.++|||||||++|||++ ||.... .......... .....+......++++.+++..|+..+|++||+++.+.+
T Consensus 192 ~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~~ 271 (293)
T d1csna_ 192 RRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG 271 (293)
T ss_dssp HHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred hHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHhccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence 99999999999999997 775322 2222211111 111111122456789999999999999999999887753
|
| >d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Protein kinases, catalytic subunit domain: Sky1p species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=100.00 E-value=2.4e-37 Score=357.12 Aligned_cols=251 Identities=23% Similarity=0.332 Sum_probs=187.4
Q ss_pred CceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-----------CCCceeEEEEEe
Q 001059 356 DFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-----------HQHVVRYYQAWF 424 (1170)
Q Consensus 356 ~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-----------HpnIV~l~~~~~ 424 (1170)
+|+++++||+|+||+||+|+++.+|+.||||+++.. ....+.+.+|+.+|+.++ ||||+++++++.
T Consensus 14 rY~i~~~LG~G~fg~Vy~~~~~~~g~~vAvKvi~~~---~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~ 90 (362)
T d1q8ya_ 14 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGD---KVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 90 (362)
T ss_dssp TEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSC---HHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred cEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEecc---ccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEee
Confidence 599999999999999999999999999999999742 233467788999998886 467888887764
Q ss_pred ecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeecc--CCcHHHHH--HhcCCCCHHHHHHHHH
Q 001059 425 ETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYC--PRTLRQVF--ESYDHFDKELAWHLFR 500 (1170)
Q Consensus 425 e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~--~gsL~~~l--~~~~~l~e~~~~~i~~ 500 (1170)
.. .....+++|.++ .++..... .....+++..++.++.
T Consensus 91 ~~--------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 132 (362)
T d1q8ya_ 91 HK--------------------------------------GPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISK 132 (362)
T ss_dssp EE--------------------------------------ETTEEEEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHH
T ss_pred ec--------------------------------------cccceeeeeeecccccccccccccccccCCcHHHHHHHHH
Confidence 32 123455566665 33433333 3445799999999999
Q ss_pred HHHHHHHHHHh-CCccccCCCCCceeecCCCC------EEEeecCcchhccccccccCCCCCCCCCCccccCcccccCcc
Q 001059 501 QIVEGLAHIHG-QGIIHRDLTPNNIFFDARND------IKIGDFGLAKFLKLEQLDQDAAFPTDTGGVSVDGTGQVGTYF 573 (1170)
Q Consensus 501 qI~~gL~yLHs-~gIiHrDLKp~NILi~~~~~------vKL~DFGlA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~ 573 (1170)
||+.||+|||+ +||+||||||+||||+.++. +||+|||.|..... .....+||+.
T Consensus 133 qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~s~~~~~------------------~~~~~~gt~~ 194 (362)
T d1q8ya_ 133 QLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDE------------------HYTNSIQTRE 194 (362)
T ss_dssp HHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTCEETTB------------------CCCSCCSCGG
T ss_pred HHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccccccccc------------------cccccccccc
Confidence 99999999998 89999999999999986653 99999999975421 1234689999
Q ss_pred CCCcccccCCCCCCccchhHHHHHHHHHhhc---CCCchhHH------HHHHHHhhhcCCCC------------------
Q 001059 574 YTAPEIEQGWPKIDEKADMYSLGIVFFELWH---PFSTAMER------QIVLSDLKQKGELP------------------ 626 (1170)
Q Consensus 574 Y~APE~l~~~~~~~~ksDIwSlGviL~ELlt---Pf~~~~~~------~~~~~~l~~~~~~p------------------ 626 (1170)
|+|||++.+ ..|+.++||||+||++++|++ ||.+.... ..........+..|
T Consensus 195 y~aPE~~~~-~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~ 273 (362)
T d1q8ya_ 195 YRSPEVLLG-APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRG 273 (362)
T ss_dssp GCCHHHHHT-CCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--
T ss_pred ccChhhccc-cCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCCHHHhhcccccccccccch
Confidence 999999987 568999999999999999997 66533211 11111110000000
Q ss_pred ---------------------CccccCCHHHHHHHHHccCCCCCCCCCHHHHHhccCCCCc
Q 001059 627 ---------------------PSWVAKFSEQESLLRRLMSPSPSDRPSATELLQDALPPQM 666 (1170)
Q Consensus 627 ---------------------~~~~~~~~e~~~LI~~~L~~dP~~RPta~eiL~~~~~~~~ 666 (1170)
......++++.+||.+||..||.+|||++|+|+||||+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~ 334 (362)
T d1q8ya_ 274 LLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDT 334 (362)
T ss_dssp CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTC
T ss_pred hhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCC
Confidence 0112234578999999999999999999999999999854
|
| >d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: RIO1-like kinases domain: Rio2 serine protein kinase C-terminal domain species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.84 E-value=9e-22 Score=205.53 Aligned_cols=135 Identities=21% Similarity=0.173 Sum_probs=105.5
Q ss_pred ceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCC----------------hhhHHHHHHHHHHHHhccCCCceeEE
Q 001059 357 FEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKS----------------LPVNDRILREVATLSRLQHQHVVRYY 420 (1170)
Q Consensus 357 y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~----------------~~~~~~~~~Ev~iL~~l~HpnIV~l~ 420 (1170)
+.+.++||+|+||+||+|++. +|+.||||+++....+ ........+|+..+.++.|++++..+
T Consensus 2 ~~vg~~IG~G~~g~Vy~a~~~-~g~~vAvKi~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~v~~~~ 80 (191)
T d1zara2 2 DAIGKLMGEGKESAVFNCYSE-KFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQGLAVPKVY 80 (191)
T ss_dssp SEEEEEEEECSSEEEEEEEET-TTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTTTSSSCCEE
T ss_pred chhCCEeeeCcceEEEEEECC-CCCEEEEEEEecccchhhhhhhhhhhccHHHHHHHHHHHHHHHHHHHHccCCCcceEE
Confidence 357899999999999999986 7999999987642111 01123455789999999999999887
Q ss_pred EEEeecCccccCCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCCcHHHHHHhcCCCCHHHHHHHHH
Q 001059 421 QAWFETGVADFDGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPRTLRQVFESYDHFDKELAWHLFR 500 (1170)
Q Consensus 421 ~~~~e~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~gsL~~~l~~~~~l~e~~~~~i~~ 500 (1170)
++. . .+++|||+++... ..++...+..++.
T Consensus 81 ~~~------------------------------------------~--~~lvme~~~~~~~------~~l~~~~~~~i~~ 110 (191)
T d1zara2 81 AWE------------------------------------------G--NAVLMELIDAKEL------YRVRVENPDEVLD 110 (191)
T ss_dssp EEE------------------------------------------T--TEEEEECCCCEEG------GGCCCSCHHHHHH
T ss_pred Eec------------------------------------------C--CEEEEEeeccccc------cchhhHHHHHHHH
Confidence 542 0 1689999987322 1245566778999
Q ss_pred HHHHHHHHHHhCCccccCCCCCceeecCCCCEEEeecCcchhc
Q 001059 501 QIVEGLAHIHGQGIIHRDLTPNNIFFDARNDIKIGDFGLAKFL 543 (1170)
Q Consensus 501 qI~~gL~yLHs~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~~ 543 (1170)
||+.+|+|||++||+||||||+|||++++ .++|+|||+|...
T Consensus 111 ql~~~l~~lH~~giiHrDiKP~NILv~~~-~~~liDFG~a~~~ 152 (191)
T d1zara2 111 MILEEVAKFYHRGIVHGDLSQYNVLVSEE-GIWIIDFPQSVEV 152 (191)
T ss_dssp HHHHHHHHHHHTTEECSCCSTTSEEEETT-EEEECCCTTCEET
T ss_pred HHHHHHHHHhhCCEEEccCChhheeeeCC-CEEEEECCCcccC
Confidence 99999999999999999999999999865 5899999999754
|
| >d1kmma1 c.51.1.1 (A:326-424) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Histidyl-tRNA synthetase (HisRS), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.53 E-value=8.3e-15 Score=135.50 Aligned_cols=94 Identities=17% Similarity=0.265 Sum_probs=88.8
Q ss_pred CceEEEEEcCCCccHHHHHHHHHHHHHc--CCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 001059 1064 GTSVLVCSRGGGGLLVERMELVAELWEE--NIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1141 (1170)
Q Consensus 1064 ~~~vlv~~~~~~~~~~~a~~ia~~LR~~--Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~ 1141 (1170)
.+||+|++.+ ++...+|+.+++.||+. |++|++++. ++++++++++|++.|+||++|+|++|.++|+|+||||.+|
T Consensus 3 ~vdv~vi~~~-~~~~~~a~~la~~LR~~~~gi~v~~~~~-~~~l~kq~k~A~~~~~~~~iiiG~~E~~~~~v~vk~l~~~ 80 (99)
T d1kmma1 3 VVDIYLVASG-ADTQSAAMALAERLRDELPGVKLMTNHG-GGNFKKQFARADKWGARVAVVLGESEVANGTAVVKDLRSG 80 (99)
T ss_dssp SCSEEEECCS-TTHHHHHHHHHHHHHHHSTTCCEEECCS-CCCHHHHHHHHHHHTCSEEEECCHHHHHTTEEEEEETTTC
T ss_pred CCEEEEEECC-HHHHHHHHHHHHHHHhcCCCeEEEEeCC-CCCHHHHHHHHHHhCCChhhhcCchhhhccEEEEEECCCC
Confidence 5689999996 77899999999999998 999998876 6799999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHH
Q 001059 1142 KEKEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1142 eq~~v~~~~l~~~l~~~l 1159 (1170)
+|..+++++++++|++.|
T Consensus 81 ~q~~v~~~el~~~l~~~L 98 (99)
T d1kmma1 81 EQTAVAQDSVAAHLRTLL 98 (99)
T ss_dssp CEEEEEHHHHHHHHHHHH
T ss_pred CEEEEeHHHHHHHHHHHh
Confidence 999999999999999876
|
| >d1wu7a1 c.51.1.1 (A:330-426) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Histidyl-tRNA synthetase (HisRS), C-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.52 E-value=1.9e-14 Score=132.43 Aligned_cols=93 Identities=23% Similarity=0.328 Sum_probs=87.1
Q ss_pred CceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcc
Q 001059 1064 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKE 1143 (1170)
Q Consensus 1064 ~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq 1143 (1170)
..+|+||+.+ +.....|.++++.||+.|++|++++. +++++++|++|++.|+||+|++|++|+++|+|+||||.+|+|
T Consensus 3 ~~~V~i~~~g-~~~~~~~~~l~~~Lr~~gi~v~~d~~-~~~l~kq~~~A~~~~~~~~iiiG~~E~~~~~v~ik~l~~~~q 80 (97)
T d1wu7a1 3 KKSVYICRVG-KINSSIMNEYSRKLRERGMNVTVEIM-ERGLSAQLKYASAIGADFAVIFGERDLERGVVTIRNMYTGSQ 80 (97)
T ss_dssp SCEEEEEEES-SCCHHHHHHHHHHHHTTTCEEEECCS-CCCHHHHHHHHHHTTCSEEEEEEHHHHHTTEEEEEETTTCCE
T ss_pred CceEEEEEeC-HHHHHHHHHHHHHHHHCCCEEEEECC-CCcHHHHHHHHHhcCCCeEEecCCccccCCceEEEECCCCCE
Confidence 4589999997 77889999999999999999998887 679999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHH
Q 001059 1144 KEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1144 ~~v~~~~l~~~l~~~ 1158 (1170)
..+++++++++|...
T Consensus 81 ~~v~~~~l~~~l~~~ 95 (97)
T d1wu7a1 81 ENVGLDSVVEHLISQ 95 (97)
T ss_dssp EEEEGGGHHHHHHHC
T ss_pred EEEeHHHHHHHHHhc
Confidence 999999999988753
|
| >d1h4vb1 c.51.1.1 (B:326-421) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Histidyl-tRNA synthetase (HisRS), C-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=99.50 E-value=1.2e-14 Score=133.53 Aligned_cols=93 Identities=17% Similarity=0.257 Sum_probs=86.8
Q ss_pred CceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCcc
Q 001059 1064 GTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKKE 1143 (1170)
Q Consensus 1064 ~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~eq 1143 (1170)
.++|+|++.+ ++...+|+.+++.||+ |++|++++. +++++++|++|++.|+||+||+|++|+++|+|+||||.+|+|
T Consensus 3 ~pdv~iv~~~-~~~~~~a~~i~~~LR~-~~~~~~~~~-~~~l~kq~k~A~~~~~~~~iiiG~~E~~~~~v~vK~l~~~~q 79 (96)
T d1h4vb1 3 GPDLYLIPLT-EEAVAEAFYLAEALRP-RLRAEYALA-PRKPAKGLEEALKRGAAFAGFLGEDELRAGEVTLKRLATGEQ 79 (96)
T ss_dssp CCSEEEEESS-HHHHHHHHHHHHHHTT-TSCEEECSS-CCCHHHHHHHHHHTTCSEEEEECHHHHHHTEEEEEETTTCCE
T ss_pred CCEEEEEEcC-HHHHHHHHHHHHHHHc-CceEEEECC-CCCHHHHHHHHHHcCCCEEEEecchhHhcCcEEEEECCCCcE
Confidence 4689999996 7789999999999985 999998876 679999999999999999999999999999999999999999
Q ss_pred cccchHHHHHHHHHHH
Q 001059 1144 KEVQRESLVRFLLDAI 1159 (1170)
Q Consensus 1144 ~~v~~~~l~~~l~~~l 1159 (1170)
.++++++++++|++.|
T Consensus 80 ~~v~~~el~~~l~~~l 95 (96)
T d1h4vb1 80 VRLSREEVPGYLLQAL 95 (96)
T ss_dssp EEEEGGGHHHHHHHHC
T ss_pred EEEEHHHHHHHHHHhh
Confidence 9999999999998764
|
| >d1qf6a1 c.51.1.1 (A:533-642) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Threonyl-tRNA synthetase (ThrRS), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=99.50 E-value=6.2e-14 Score=132.06 Aligned_cols=99 Identities=15% Similarity=0.114 Sum_probs=92.4
Q ss_pred CCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCC
Q 001059 1062 EAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK 1141 (1170)
Q Consensus 1062 ~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~ 1141 (1170)
.+|.+|+|++++ ++...+|.++++.||+.|++|++++. +.++++++++|+..|+||+++||++|+++|+|+||+|+++
T Consensus 5 laP~Qv~iipi~-~~~~~~a~~i~~~Lr~~gi~v~~d~~-~~~l~~ki~~a~~~g~p~~iiiG~~E~~~~~V~ir~~~~~ 82 (110)
T d1qf6a1 5 LAPVQVVIMNIT-DSQSEYVNELTQKLSNAGIRVKADLR-NEKIGFKIREHTLRRVPYMLVCGDKEVESGKVAVRTRRGK 82 (110)
T ss_dssp TCSSCEEEEESS-HHHHHHHHHHHHHHHTTTCCEEEECC-SSCHHHHHHHHHHTTCSEEEEECTTTGGGCCEEEEESSSC
T ss_pred cCCceEEEEecc-HHHHHHHHHHHHHHHHhhccccccCC-ccchhHHHHHHHHcCCCEEEEECchHHhCCEEEEEECCCC
Confidence 468899999996 66788999999999999999998876 7799999999999999999999999999999999999999
Q ss_pred cccccchHHHHHHHHHHHHhh
Q 001059 1142 KEKEVQRESLVRFLLDAIASQ 1162 (1170)
Q Consensus 1142 eq~~v~~~~l~~~l~~~l~~~ 1162 (1170)
+|..++++++++.|.+.+++.
T Consensus 83 ~q~~i~~~e~i~~l~~~i~~r 103 (110)
T d1qf6a1 83 DLGSMDVNEVIEKLQQEIRSR 103 (110)
T ss_dssp EEEEECHHHHHHHHHHHHHTT
T ss_pred ceEEeeHHHHHHHHHHHHHHH
Confidence 999999999999999988754
|
| >d1qe0a1 c.51.1.1 (A:326-420) Histidyl-tRNA synthetase (HisRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Histidyl-tRNA synthetase (HisRS), C-terminal domain species: Staphylococcus aureus [TaxId: 1280]
Probab=99.47 E-value=2.3e-14 Score=131.43 Aligned_cols=92 Identities=14% Similarity=0.252 Sum_probs=86.3
Q ss_pred CCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCCc
Q 001059 1063 AGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVKK 1142 (1170)
Q Consensus 1063 ~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~e 1142 (1170)
...|++|++.+ ++...+|+++++.||+.|++|++++. ..++++++++|++.|+||++++|++|.++|+|+||+|.+++
T Consensus 3 ~~~dv~ii~~~-~~~~~~a~~i~~~Lr~~gi~v~~d~~-~~~l~kq~~~A~~~~~~~~iiiG~~E~~~~~v~vk~l~~~~ 80 (95)
T d1qe0a1 3 ENLDLFIVTMG-DQADRYAVKLLNHLRHNGIKADKDYL-QRKIKGQMKQADRLGAKFTIVIGDQELENNKIDVKNMTTGE 80 (95)
T ss_dssp CCCSEEEEECH-HHHHHHHHHHHHHHHTTTCCEEECCS-CCCHHHHHHHHHHTTCSEEEEECHHHHHHTCEEEEETTTCC
T ss_pred CCCeEEEEEeC-HHHHHHHHHHHHHHHHCCCcEEecCC-CCCHHHHHHHHHhcCCCEEEEEccchhhCCEEEEEECCCCC
Confidence 35689999996 77899999999999999999998876 67999999999999999999999999999999999999999
Q ss_pred ccccchHHHHHHHH
Q 001059 1143 EKEVQRESLVRFLL 1156 (1170)
Q Consensus 1143 q~~v~~~~l~~~l~ 1156 (1170)
|..+++++++++|+
T Consensus 81 q~~i~~~el~~~l~ 94 (95)
T d1qe0a1 81 SETIELDALVEYFK 94 (95)
T ss_dssp EEEECTTHHHHHHH
T ss_pred EEEEeHHHHHHHhc
Confidence 99999999999876
|
| >d1nyra1 c.51.1.1 (A:533-645) Threonyl-tRNA synthetase (ThrRS), C-terminal domain {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Threonyl-tRNA synthetase (ThrRS), C-terminal domain species: Staphylococcus aureus [TaxId: 1280]
Probab=99.45 E-value=8.4e-14 Score=131.80 Aligned_cols=100 Identities=15% Similarity=0.166 Sum_probs=91.0
Q ss_pred CCCCCceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcC
Q 001059 1060 RNEAGTSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLD 1139 (1170)
Q Consensus 1060 ~~~~~~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~ 1139 (1170)
...+|.+|+|++++.+.....|.++++.||+.|++|++++. +.++++++++|+..|+|++|+||++|+++|+|+||++.
T Consensus 9 ~~lAP~qv~iipi~~~~~~~~a~~l~~~Lr~~gi~v~~D~~-~~~~g~k~~~a~~~g~p~~iiiG~~E~~~~~v~vr~~~ 87 (113)
T d1nyra1 9 TWLAPKQVQIIPVNVDLHYDYARQLQDELKSQGVRVSIDDR-NEKMGYKIREAQMQKIPYQIVVGDKEVENNQVNVRQYG 87 (113)
T ss_dssp TTTCSSCEEEEESSHHHHHHHHHHHHHHHHTTTCCEEECCS-SCCHHHHHHHHHHHTCSEEEEECHHHHHTTEEEEEETT
T ss_pred cccCCceEEEEEeCcHHHhhhHHHHHHHhhhhccceeeccc-ccccchHHHHHHHhCceEEEEEccccccCCEEEEEECC
Confidence 44678899999986344567899999999999999998876 67899999999999999999999999999999999999
Q ss_pred CCcccccchHHHHHHHHHHHH
Q 001059 1140 VKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1140 ~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
+++|..++++++++.|.+.++
T Consensus 88 ~~~q~~v~~~e~i~~l~~ei~ 108 (113)
T d1nyra1 88 SQDQETVEKDEFIWNLVDEIR 108 (113)
T ss_dssp SSCCCEEEHHHHHHHHHHHHH
T ss_pred CCcEEEEeHHHHHHHHHHHHH
Confidence 999999999999999988875
|
| >d1nj1a1 c.51.1.1 (A:284-410) Prolyl-tRNA synthetase (ProRS) domain {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Prolyl-tRNA synthetase (ProRS) domain species: Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]
Probab=99.30 E-value=1.2e-12 Score=126.36 Aligned_cols=106 Identities=11% Similarity=0.063 Sum_probs=93.4
Q ss_pred CCCCCCCceEEEEEcCCC----ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeE
Q 001059 1058 PVRNEAGTSVLVCSRGGG----GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLV 1133 (1170)
Q Consensus 1058 ~~~~~~~~~vlv~~~~~~----~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v 1133 (1170)
.+...+|.+|.|+++..+ +...+|.+++..||+.|++|++++. +.++++++++|+..|+|++|+||++|+++|+|
T Consensus 5 ~P~~iAP~qV~Iipi~~~~~~e~~~~~a~~l~~~L~~~gi~v~~D~r-~~~~g~K~~~a~~~giP~~iiiG~ke~~~~~v 83 (127)
T d1nj1a1 5 LPPDVAAHQVVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDR-DIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAA 83 (127)
T ss_dssp CCTTTSSCSEEEEECCSSSSHHHHHHHHHHHHHHHHTTTCCEEECCC-SSCHHHHHHHHHHEECSEEEEECHHHHTTTEE
T ss_pred CCcccCCceEEEEEccCCCchHHHHHHHHHHHHHHHhcCCceEEEec-cchHHHHHHHHHhhcCchheeecccccccCEE
Confidence 344568899999987422 3567899999999999999998876 67999999999999999999999999999999
Q ss_pred EEEEcCCCcccccchHHHHHHHHHHHHhhcc
Q 001059 1134 KVRHLDVKKEKEVQRESLVRFLLDAIASQFR 1164 (1170)
Q Consensus 1134 ~vk~l~~~eq~~v~~~~l~~~l~~~l~~~~~ 1164 (1170)
+|++++++++..++++++++++.+.++..+.
T Consensus 84 ~l~~r~~~~~~~v~~~~~~~~i~~ll~~i~~ 114 (127)
T d1nj1a1 84 VISRRDTGEKVTADLQGIEETLRELMKDILE 114 (127)
T ss_dssp EEEESSSCCEEEEETTTHHHHHHHHHHHHHH
T ss_pred EEEEcCCCcEEEeeHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999888776544
|
| >d1g5ha1 c.51.1.1 (A:343-469) The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: The aaRS-like accessory subunit of mitochondrial polymerase gamma, C-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.24 E-value=9.5e-12 Score=119.87 Aligned_cols=104 Identities=23% Similarity=0.181 Sum_probs=89.7
Q ss_pred CCCCCceEEEEEcCCC--ccHHHHHHHHHHHHHcCCeEEEeeC--CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEE
Q 001059 1060 RNEAGTSVLVCSRGGG--GLLVERMELVAELWEENIKAQFVPV--PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKV 1135 (1170)
Q Consensus 1060 ~~~~~~~vlv~~~~~~--~~~~~a~~ia~~LR~~Gi~v~~~~~--~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~v 1135 (1170)
+..+|.+|.|++...+ +....|.+++..||+.|++|.+... .+.++++++++|++.|+||+|++|++|+++|+|+|
T Consensus 8 p~lAP~qV~Ii~~~~~~~e~~~~a~~l~~~L~~~gi~v~~~~~D~~~~~lg~k~~~a~~~giP~~iiiG~~e~~~~~V~i 87 (127)
T d1g5ha1 8 PCLAPIKVALDVGKGPTVELRQVCQGLLNELLENGISVWPGYSETVHSSLEQLHSKYDEMSVLFSVLVTETTLENGLIQL 87 (127)
T ss_dssp TTTCSCCEEEEECSSCHHHHHHHHHHHHHHHHHTTCCEEEGGGSCCCSCHHHHHHHHHHTTCSEEEEECHHHHHHCEEEE
T ss_pred cccCCceEEEEecCCCCHHHHHHHHHHHHHHHHhcCceeeeeecCCCcCHHHHHHHHHHhCCcEEEEEcCCccccCEEEE
Confidence 3567889999987522 3456788999999999999986432 24679999999999999999999999999999999
Q ss_pred EEcCCCcccccchHHHHHHHHHHHHhhc
Q 001059 1136 RHLDVKKEKEVQRESLVRFLLDAIASQF 1163 (1170)
Q Consensus 1136 k~l~~~eq~~v~~~~l~~~l~~~l~~~~ 1163 (1170)
|++++++|..++++++.++|.+.|++..
T Consensus 88 r~r~t~~q~~i~i~~l~~~l~~~l~~~~ 115 (127)
T d1g5ha1 88 RSRDTTMKEMMHISKLRDFLVKYLASAS 115 (127)
T ss_dssp EETTTCCEEEEETTSHHHHHHHHHHHHH
T ss_pred EECCCCceEEEEHHHHHHHHHHHHHccc
Confidence 9999999999999999999999887643
|
| >d2daya1 d.20.1.3 (A:8-122) E3 ubiquitin-protein ligase RNF25 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: E3 ubiquitin-protein ligase RNF25 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.23 E-value=3.2e-12 Score=121.19 Aligned_cols=65 Identities=26% Similarity=0.518 Sum_probs=63.6
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHH
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFL 73 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l 73 (1170)
.+.++|.|+||++||+++|.+.+...+|+++.++..|.+.|.+++++|+ ||+|||+||+++||||
T Consensus 51 ~~~v~L~~~~p~~YP~~~P~i~~~~~~~l~~~~~~~L~~~l~~~~~e~~--G~~mif~lv~~~qE~L 115 (115)
T d2daya1 51 YVCFTLVLQVPAEYPHEVPQISIRNPRGLSDEQIHTILQVLGHVAKAGL--GTAMLYELIEKGKEIL 115 (115)
T ss_dssp CCEEEEEEEECSSTTSSCCEEEEEEEESSCHHHHHHHHHHHHHHHHHTT--TSCCHHHHHHHHHHHH
T ss_pred ceEEEEEEEcCCCCCCCCCcEEeeccCCCCHHHHHHHHHHHHHHHHHcC--CCEEHHHHHHHHHhhC
Confidence 5889999999999999999999999999999999999999999999999 9999999999999997
|
| >d1nj8a3 d.104.1.1 (A:0-267) Prolyl-tRNA synthetase (ProRS) {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Prolyl-tRNA synthetase (ProRS) species: Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]
Probab=99.22 E-value=2.5e-11 Score=132.20 Aligned_cols=142 Identities=11% Similarity=0.126 Sum_probs=108.5
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cC-CCcccccceEEEeccC----Cceeeec
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LG-DCPQFKRNTVKLLTHG----GDLLELS 780 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~-~~~~~~~~my~f~D~~----G~~laLR 780 (1170)
....+|+..|+|..+++++.|++.+++.+.++||++|.||.| .+ .+ +......+||.+.+.+ ++.++||
T Consensus 21 ~~~v~G~~~~lP~G~~i~~~i~~~i~~~~~~~G~~ev~~P~l~~~~l~~ks~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 100 (268)
T d1nj8a3 21 RYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALR 100 (268)
T ss_dssp CSTTSSCCBBCHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEEHHHHHHHCSSSGGGGGGCEEEEESSSSEEEEEEEEC
T ss_pred CCCCCccEEECccHHHHHHHHHHHHHHHHHHcCCeEEeehhhhhhHhhhccCCCccccccceeEEeccccccchhhhhcc
Confidence 345579999999999999999999999999999999999998 22 22 2555678898887543 4679999
Q ss_pred CCCCHHHHHHHHh----CCCCceeEEEecCeEEcCCCC----CCCCceeE-eEEEEeCCCCcccHH---HHHHHHHHHHH
Q 001059 781 HELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGH----SPPNRYLQ-GDFDIIGGASALTEA---EVLKVTMDIVT 848 (1170)
Q Consensus 781 PD~T~~iaR~~~~----~~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q-~GvEiiG~~~~~aDa---Evi~la~~~l~ 848 (1170)
|..+++++++++. ++..|+|+|++|+|||+|... -|++||+| -++.++......++. +++....++++
T Consensus 101 P~~~~~~~~i~~~~~~Syr~LP~r~~e~~~~fR~E~~~~~GllR~reF~~~dd~~~~~~~~~~~~~~~~~~~~~y~~if~ 180 (268)
T d1nj8a3 101 PTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFD 180 (268)
T ss_dssp SSSHHHHHHHHHTTCCBTTSCCCCEEEEECCBCCCCSCCBTTTBCSBCSCEEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCchhHHhhhhhccchhhhheEEeeccccccccccccccceeEEEEeeechhceeccccchhhHHHHHHHHHHHHHHH
Confidence 9999999998876 345699999999999998433 25667975 556666554443333 34555667777
Q ss_pred HcCCC
Q 001059 849 RFFHA 853 (1170)
Q Consensus 849 ~lgi~ 853 (1170)
.+|+.
T Consensus 181 ~l~l~ 185 (268)
T d1nj8a3 181 TLGIP 185 (268)
T ss_dssp HHTCC
T ss_pred hcCcc
Confidence 78876
|
| >d1qf6a4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Threonyl-tRNA synthetase (ThrRS) species: Escherichia coli [TaxId: 562]
Probab=99.21 E-value=1.3e-11 Score=135.45 Aligned_cols=151 Identities=9% Similarity=0.078 Sum_probs=123.2
Q ss_pred cCCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEeccCCceeeecCCCC
Q 001059 711 LNRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTHGGDLLELSHELR 784 (1170)
Q Consensus 711 ln~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~~G~~laLRPD~T 784 (1170)
+++...|+..|+|..+++++.|++.+++.+.++||++|.||.+ .-+++.+...++||.+.+. ++.++|||.-.
T Consensus 15 ~~~~~~G~~~~lP~G~~l~~~L~~~i~e~~~~~G~~eV~~P~L~~~~l~~~sG~~~~~~~~~~~~~~~-~~~~~L~Pt~e 93 (291)
T d1qf6a4 15 MQEEAPGMVFWHNDGWTIFRELEVFVRSKLKEYQYQEVKGPFMMDRVLWEKTGHWDNYKDAMFTTSSE-NREYCIKPMNC 93 (291)
T ss_dssp CCTTSTTCCEECHHHHHHHHHHHHHHHHHHHHTTCEECCCCSEEETHHHHHHSHHHHHGGGCEEEEET-TEEEEECSSSH
T ss_pred ccCCCCcceEEccCHHHHHHHHHHHHHHHHHHcCCEEEEcccccchhHHhhhchhhhccchhcccccc-chhhcccccCc
Confidence 3456799999999999999999999999999999999999999 2223356678899987665 68999999777
Q ss_pred HHHHHHHHh----CCCCceeEEEecCeEEcCC-CC----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCC
Q 001059 785 LPFIRWAIS----NQKSSFKRYEISSVYRRAI-GH----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHA 853 (1170)
Q Consensus 785 ~~iaR~~~~----~~~~P~r~~Y~g~VfR~e~-~~----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~ 853 (1170)
++++.++.. ++..|+|+|+++++||+|. +. .|.++|+|.++.+|..+...++ .+++.++.++++.+|++
T Consensus 94 ~~~~~~~~~~~~sy~~LPl~~~q~~~~fR~E~~~~~~Gl~R~reF~~~d~h~f~~~e~~~~e~~~~~~~~~~i~~~lGl~ 173 (291)
T d1qf6a4 94 PGHVQIFNQGLKSYRDLPLRMAEFGSCHRNEPSGSLHGLMRVRGFTQDDAHIFCTEEQIRDEVNGCIRLVYDMYSTFGFE 173 (291)
T ss_dssp HHHHHHHTTSCEEGGGCSEEEEEEEEEECCCCGGGCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHGGGTCC
T ss_pred HHHHHHHHccccchhhcCeeEeecceeeecccccccccccccccceeccceeEecchhhHHHHHHHHHHHHHHHHHcCCc
Confidence 777777655 3456999999999999984 22 2566799999999997665333 27889999999999997
Q ss_pred cceEEEeCcH
Q 001059 854 ESCDIHLNHG 863 (1170)
Q Consensus 854 ~~~~i~lg~~ 863 (1170)
. +.+.++.+
T Consensus 174 ~-~~v~~s~~ 182 (291)
T d1qf6a4 174 K-IVVKLSTR 182 (291)
T ss_dssp C-CEEEEECC
T ss_pred e-EEEEEecC
Confidence 5 88887764
|
| >d1nyra4 d.104.1.1 (A:242-532) Threonyl-tRNA synthetase (ThrRS) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Threonyl-tRNA synthetase (ThrRS) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.17 E-value=1.7e-11 Score=134.57 Aligned_cols=148 Identities=9% Similarity=0.064 Sum_probs=120.2
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce------eccCCCcccccceEEEec-cCCceeeecCCCCHHH
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLT-HGGDLLELSHELRLPF 787 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D-~~G~~laLRPD~T~~i 787 (1170)
..|+..|+|..+.+++.|++.+++.+.++||++|.||.+ .-.++.+...++||++.+ .+++.++|||.-.+++
T Consensus 19 g~G~~~~~p~G~~l~~~L~~~~~~~~~~~G~~eV~~P~l~~~~l~~~sG~~~~~~~~~~~~~~~~~~~~~~L~pt~e~~~ 98 (291)
T d1nyra4 19 GAGLPLWLPNGATIRREIERYIVDKEVSMGYDHVYTPVLANVDLYKTSGHWDHYQEDMFPPMQLDETESMVLRPMNCPHH 98 (291)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHHHTTEEECBCCSEEETHHHHHHTHHHHCTTSSCCCEEETTTEEEEECSSSHHHH
T ss_pred cCcceEEehhHHHHHHHHHHHHHHHHHHcCCEEEECccccchhHhhhhccccccccceEEEeeccccccccccccchhHH
Confidence 579999999999999999999999999999999999999 223345677899998765 4578999999777777
Q ss_pred HHHHHh----CCCCceeEEEecCeEEcCCCC-----CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHcCCCcce
Q 001059 788 IRWAIS----NQKSSFKRYEISSVYRRAIGH-----SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRFFHAESC 856 (1170)
Q Consensus 788 aR~~~~----~~~~P~r~~Y~g~VfR~e~~~-----~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~lgi~~~~ 856 (1170)
+.++.. ++..|+|+|.++++||+|... .|.++|+|.+..+|+.++...+ .+++.++.++++.||+.. .
T Consensus 99 ~~~~~~~~~sy~dLPlr~~~~~~~fR~E~~~~~~Gl~Rvr~F~~~d~~~f~~~eq~~~e~~~~~~~~~~i~~~lGl~~-~ 177 (291)
T d1nyra4 99 MMIYANKPHSYRELPIRIAELGTMHRYEASGAVSGLQRVRGMTLNDSHIFVRPDQIKEEFKRVVNMIIDVYKDFGFED-Y 177 (291)
T ss_dssp HHHHHTSCCBGGGCCEEEEEEEEEECCCCTTTCBTTTBCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHTTCCC-E
T ss_pred HHhhhcEeccccccceEEeeccceeecCCCcccccccceeeeeeeeheeecCCcccHHHHHHHHHHHHHHhhhcCcCc-e
Confidence 766654 245699999999999998643 2456799999999987654222 478899999999999975 7
Q ss_pred EEEeCcH
Q 001059 857 DIHLNHG 863 (1170)
Q Consensus 857 ~i~lg~~ 863 (1170)
.+.++..
T Consensus 178 ~v~~~~~ 184 (291)
T d1nyra4 178 SFRLSYR 184 (291)
T ss_dssp EEEEEEC
T ss_pred EEEEecC
Confidence 7777653
|
| >d1nj8a1 c.51.1.1 (A:268-393) Prolyl-tRNA synthetase (ProRS) domain {Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Prolyl-tRNA synthetase (ProRS) domain species: Archaeon (Methanocaldococcus jannaschii) [TaxId: 2190]
Probab=99.16 E-value=2.4e-11 Score=116.88 Aligned_cols=105 Identities=8% Similarity=0.022 Sum_probs=89.7
Q ss_pred CCCCCCCceEEEEEcCCC----ccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeE
Q 001059 1058 PVRNEAGTSVLVCSRGGG----GLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLV 1133 (1170)
Q Consensus 1058 ~~~~~~~~~vlv~~~~~~----~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v 1133 (1170)
.+...+|.+|.|+++..+ ....+|.++++.|+ .|++|.+++. +.+++++++.|+..|+|++|++|++|+++|+|
T Consensus 5 ~P~~lAP~qv~Iipi~~~~~~~~~~~~a~~l~~~L~-~~i~v~~D~~-~~~~g~k~~~a~~~giP~~iiiG~ke~~~~~v 82 (126)
T d1nj8a1 5 LPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLK-GKFRVHIDDR-DIRPGRKFNDWEIKGVPLRIEVGPKDIENKKI 82 (126)
T ss_dssp CCTTSCSSSEEEEECCCSSCHHHHHHHHHHHHHHHH-TTSCEEECCS-CSCHHHHHHHHHHTTCSEEEEECHHHHHTTEE
T ss_pred CchhhCCceEEEEeccCCCchHHHHHHHHHHHHHhc-cceeEEeecc-cchHHHHHHHHHHHHHHHHHhcccchhhCCEE
Confidence 445568899999988522 23567888888885 5999998776 67899999999999999999999999999999
Q ss_pred EEEEcCCCcccccchHHHHHHHHHHHHhhcc
Q 001059 1134 KVRHLDVKKEKEVQRESLVRFLLDAIASQFR 1164 (1170)
Q Consensus 1134 ~vk~l~~~eq~~v~~~~l~~~l~~~l~~~~~ 1164 (1170)
+|++++++++..++++++++.+.+.|.....
T Consensus 83 ~lr~R~~~~~~~v~~~~l~~~i~~~l~~~~~ 113 (126)
T d1nj8a1 83 TLFRRDTMEKFQVDETQLMEVVEKTLNNIME 113 (126)
T ss_dssp EEEETTTCCEEEEETTSHHHHHHHHHHHHHH
T ss_pred EEEEcCCCceEEEcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999887765443
|
| >d1atia1 c.51.1.1 (A:395-505) Glycyl-tRNA synthetase (GlyRS), C-terminal domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Glycyl-tRNA synthetase (GlyRS), C-terminal domain species: Thermus thermophilus [TaxId: 274]
Probab=99.11 E-value=1e-10 Score=109.80 Aligned_cols=97 Identities=16% Similarity=0.116 Sum_probs=86.8
Q ss_pred CCceEEEEEcCC--CccHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCC---------
Q 001059 1063 AGTSVLVCSRGG--GGLLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKG--------- 1131 (1170)
Q Consensus 1063 ~~~~vlv~~~~~--~~~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~--------- 1131 (1170)
+|.+|.|+|+.. ++....|.++++.|++.|++|.++.. +.+++++++.|+..|+|++|+||++|+++|
T Consensus 3 AP~qv~Iipi~~~~~~~~~~a~~l~~~L~~~gi~v~~Ddr-~~~~G~K~~~~~~~gvP~~iiIG~kel~~g~~~~~~~~n 81 (111)
T d1atia1 3 APIKVAVIPLVKNRPEITEYAKRLKARLLALGLGRVLYED-TGNIGKAYRRHDEVGTPFAVTVDYDTIGQSKDGTTRLKD 81 (111)
T ss_dssp CSCSEEEEESCSSCHHHHHHHHHHHHHHHTTCSSCEEECC-CSCHHHHHHHHHHTTCSEEEEECHHHHTCCTTSCCTTTT
T ss_pred CCcEEEEEEccCCCHHHHHHHHHHHhhhccccceeEeecC-CCCHHHHHHHHHHcCCCEEEEECcHHhhcccccccccCc
Confidence 578899999852 34678899999999999999998876 668999999999999999999999999885
Q ss_pred eEEEEEcCCCcccccchHHHHHHHHHHHH
Q 001059 1132 LVKVRHLDVKKEKEVQRESLVRFLLDAIA 1160 (1170)
Q Consensus 1132 ~v~vk~l~~~eq~~v~~~~l~~~l~~~l~ 1160 (1170)
+|+||+++++++..++++++.++|.+.|.
T Consensus 82 tV~ir~Rd~~~~~~v~i~e~~~~l~~~l~ 110 (111)
T d1atia1 82 TVTVRDRDTMEQIRLHVDELEGFLRERLR 110 (111)
T ss_dssp EEEEEETTTCCEEEEEHHHHHHHHHHHHC
T ss_pred eEEEEEcCCCceEEEEHHHHHHHHHHHhC
Confidence 79999999999999999999999988763
|
| >d1ukxa_ d.20.1.3 (A:) EIF2-alpha kinase 4 (GCN2-like protein) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: EIF2-alpha kinase 4 (GCN2-like protein) species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.11 E-value=2.2e-11 Score=118.92 Aligned_cols=72 Identities=36% Similarity=0.576 Sum_probs=68.0
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhhhhCCCeEEEeeHHHHHHHHhhhCCCC
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSNAREGRVMIFNLVEAAQEFLSEIVPLG 80 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~enl~~gm~miftl~~~~~e~l~~~~~~~ 80 (1170)
.+.+.|.|+||++||+++|.+.+...++|++..+..|.+.|++.+++|+ ||+|||+||+.+||||++.....
T Consensus 62 ~~~i~L~~~lp~~YP~~~P~i~~~~~~~l~~~~~~~L~~~l~~~~~e~~--G~~mif~lv~~lqe~L~e~n~~~ 133 (137)
T d1ukxa_ 62 YVQVELRVKCPPTYPDVVPEIDLKNAKGLSNESVNLLKSHLEELAKKQC--GEVMIFELAHHVQSFLSEHNKSG 133 (137)
T ss_dssp SCEEEEEECCCTTTTSSCCCCEEEEEESSSSSHHHHHHHHHHHHHHHHT--TSCCHHHHHHHHHHHHHHHCCCC
T ss_pred eEEEEEEEECCCCCCcccceEEEecCCCCCHHHHHHHHHHHHHHHHHcC--CCEeHHHHHHHHHHHHHHhCCCC
Confidence 5889999999999999999999999999999999999999999999999 99999999999999999875443
|
| >d1hc7a1 c.51.1.1 (A:277-403) Prolyl-tRNA synthetase (ProRS) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Prolyl-tRNA synthetase (ProRS) domain species: Thermus thermophilus [TaxId: 274]
Probab=99.06 E-value=2.5e-10 Score=109.71 Aligned_cols=106 Identities=9% Similarity=0.003 Sum_probs=89.8
Q ss_pred CCCCCCCceEEEEEcCCCc----cHHHHHHHHHHHHHcCCeEEEeeCCCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeE
Q 001059 1058 PVRNEAGTSVLVCSRGGGG----LLVERMELVAELWEENIKAQFVPVPDPSLTEQYEYASEHDIKCLVILTDTGAQKGLV 1133 (1170)
Q Consensus 1058 ~~~~~~~~~vlv~~~~~~~----~~~~a~~ia~~LR~~Gi~v~~~~~~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v 1133 (1170)
.+...+|.+|.|+++..+. ...+|.+++..|+..|++|.+++...++++++++.|+..|+|++|+||++|+++|+|
T Consensus 5 ~P~~lAP~qv~Iipi~~~~~~~~~~~~a~~i~~~L~~~girv~~Dd~~~~~~g~K~~~a~~~giP~~iiiG~~e~~~~~v 84 (127)
T d1hc7a1 5 LPPRLAPIQVVIVPIYKDESRERVLEAAQGLRQALLAQGLRVHLDDRDQHTPGYKFHEWELKGVPFRVELGPKDLEGGQA 84 (127)
T ss_dssp CCTTTCSCSEEEEECCCTTTHHHHHHHHHHHHHHHHHTTCCEEECCCSSSCHHHHHHHHHHTTCSEEEEECHHHHHTTEE
T ss_pred CchhhCCeeEEEEEecCChhhHHHHHHHHHHHHHHHHcCCeeEEecccchhHHHHHHHHHhhcCCeeEEechhhhcCceE
Confidence 3445688999999985332 246788999999999999998877566899999999999999999999999999999
Q ss_pred EEEEcCCCcccccchHHHHHHHHHHHHhhcc
Q 001059 1134 KVRHLDVKKEKEVQRESLVRFLLDAIASQFR 1164 (1170)
Q Consensus 1134 ~vk~l~~~eq~~v~~~~l~~~l~~~l~~~~~ 1164 (1170)
+|+++.+ ++..++++++++++...|+....
T Consensus 85 ~v~~R~~-~k~~i~~~~~~~~i~~~l~~i~~ 114 (127)
T d1hc7a1 85 VLASRLG-GKETLPLAALPEALPGKLDAFHE 114 (127)
T ss_dssp EEEETTS-CCCEEEGGGHHHHHHHHHHHHHH
T ss_pred EEEeccC-CCceeeHHHHHHHHHHHHHHHHH
Confidence 9999865 45679999999999888876544
|
| >d1nj1a3 d.104.1.1 (A:19-283) Prolyl-tRNA synthetase (ProRS) {Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Prolyl-tRNA synthetase (ProRS) species: Arhaeon (Methanothermobacter thermautotrophicus) [TaxId: 145262]
Probab=98.95 E-value=7.4e-10 Score=120.22 Aligned_cols=141 Identities=8% Similarity=0.032 Sum_probs=104.1
Q ss_pred CCCCCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC---CcccccceEEEe----ccCCceeeec
Q 001059 712 NRDNTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD---CPQFKRNTVKLL----THGGDLLELS 780 (1170)
Q Consensus 712 n~~p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~---~~~~~~~my~f~----D~~G~~laLR 780 (1170)
.+..+|+..|+|..+.+++.|++.+++.. ..||++|.||++ .+... .+....+||++. |+.++.++||
T Consensus 19 ~~~~~G~~~~lP~G~~i~~~i~~~~~~~~-~~G~~ev~~P~l~~~~~l~~~sgh~~~~~~e~f~~~~~~~~~~~~~~~L~ 97 (265)
T d1nj1a3 19 RYPVKGMHVWMPHGFMIRKNTLKILRRIL-DRDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALR 97 (265)
T ss_dssp CCSSTTCCEECHHHHHHHHHHHHHHHHHH-TTTCEECCCCSEEEHHHHTTSHHHHHHTTTTCCEEEEETTEEEEEEEEEC
T ss_pred CCCCCceEEEcccHHHHHHHHHHHHHHHH-HhcCceehhhhhhhhhhhhhcccccccccccceeeeccCccccceeEEee
Confidence 34558999999999999999999998875 569999999987 23332 456788999987 4456789999
Q ss_pred CCCCHHHHHHHHh----CCCCceeEEEecCeEEcCCCC----CCCCceeEeEEEEeCCCCc-ccHH---HHHHHHHHHHH
Q 001059 781 HELRLPFIRWAIS----NQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASA-LTEA---EVLKVTMDIVT 848 (1170)
Q Consensus 781 PD~T~~iaR~~~~----~~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~~~-~aDa---Evi~la~~~l~ 848 (1170)
|.-+++++.+++. ++..|+|+|++|++||+|... .|.|||+|.....+...+. .++. .++....+++.
T Consensus 98 pt~~~~~~~~~~~~~~SyrdLPlr~~q~~~~fR~E~~~~~Gl~R~reF~~~~d~~~~~~~~~~~~~e~~~~~~~~~~~~~ 177 (265)
T d1nj1a3 98 PTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFN 177 (265)
T ss_dssp SSSHHHHHHHHHHHCCBTTTCCEEEEEEEEEECCCCSCCBTTTBCSEEEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred cccccceEEeeeeeeccccccceEEEeeccceeeecccCcCCEEEEEEEEeccceeecCCHHHHHHHhhhhHHHHHHHHh
Confidence 9766777776665 456799999999999998432 2556798875554433333 3443 45666667777
Q ss_pred HcCCC
Q 001059 849 RFFHA 853 (1170)
Q Consensus 849 ~lgi~ 853 (1170)
.+|+.
T Consensus 178 ~l~l~ 182 (265)
T d1nj1a3 178 SLGIP 182 (265)
T ss_dssp HHTCC
T ss_pred hcCCc
Confidence 77775
|
| >d1b76a2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Glycyl-tRNA synthetase (GlyRS) species: Thermus thermophilus [TaxId: 274]
Probab=98.93 E-value=5.1e-10 Score=125.14 Aligned_cols=147 Identities=13% Similarity=0.064 Sum_probs=112.5
Q ss_pred CCccccccchhhhhhhhHHhHHHHHH--HHcCCccccccce------eccCCCcccccceEEEecc--------------
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMF--RQHCAKHLEIEPM------YLLGDCPQFKRNTVKLLTH-------------- 772 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f--~~~Gy~~I~tP~~------~~~~~~~~~~~~my~f~D~-------------- 772 (1170)
-.|+.||.|..+++++.|++.+++-| .+.||.+|.||++ ..+++.+.+...||...+.
T Consensus 28 ~~G~y~ygP~G~~l~~~i~~~wr~~~v~~~~~~~ev~tp~i~~~~lw~~SGH~~~f~d~m~~~~~~~~~~~~~~~~~~~~ 107 (331)
T d1b76a2 28 LQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNAKARYWTPPRYFNMMFQ 107 (331)
T ss_dssp CTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEEHHHHHHTSHHHHCEEEECBSSSCBCCCCCEEEECCEE
T ss_pred ceeEeccCCcHHHHHHHHHHHHHHHHHhccCCeEEEeccccCChHHhccCccccccCCceeeecccccccCccchhhccc
Confidence 37999999999999999999999987 5899999999999 3344455566666644331
Q ss_pred --------CCceeeecCCCCHHHH----HH-HHhCCCCceeEEEecCeEEcCCCC----CCCCceeEeEEEEeCCCCccc
Q 001059 773 --------GGDLLELSHELRLPFI----RW-AISNQKSSFKRYEISSVYRRAIGH----SPPNRYLQGDFDIIGGASALT 835 (1170)
Q Consensus 773 --------~G~~laLRPD~T~~ia----R~-~~~~~~~P~r~~Y~g~VfR~e~~~----~~~~ef~Q~GvEiiG~~~~~a 835 (1170)
.+...-|||.++.++. +. ..+++..|++++++|.+||+|... .|.|||+|.++++|..++...
T Consensus 108 ~~~~~~~~~~~~~~lr~~t~~~~~~~~~~~~~~syk~LP~~~aqig~~fR~E~s~~~gl~RvReFtq~D~~~F~~~~q~~ 187 (331)
T d1b76a2 108 DLRGPRGGRGLLAYLRPETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDE 187 (331)
T ss_dssp EECSSSCCGGGEEEECSCTHHHHHTTHHHHHHHHTCCSSEEEEEEEEEECCCSSCCTTTTSCSEEEEEEEEEEECGGGHH
T ss_pred cccccccccCCcccccCcchhhHHHHHHhHHhccccccchhhhhccceecccccccccccccchhhhhhhhhhcCCcchh
Confidence 2467789998876653 32 335788899999999999997432 366789999999999876644
Q ss_pred H--HHHHHHHHHHHHHcCCCcceEEEeCc
Q 001059 836 E--AEVLKVTMDIVTRFFHAESCDIHLNH 862 (1170)
Q Consensus 836 D--aEvi~la~~~l~~lgi~~~~~i~lg~ 862 (1170)
+ ...+..+.+.+..+|+.. ..+....
T Consensus 188 ~~~~~~~~~~~~~~~~~g~~~-~~lr~~~ 215 (331)
T d1b76a2 188 YWHRYWVEERLKWWQEMGLSR-ENLVPYQ 215 (331)
T ss_dssp HHHHHHHHHHHHHHHHTTCCG-GGEEEEE
T ss_pred HHHHHHHHHHHHHHHHhhccc-hheeeee
Confidence 4 477888899999999875 6665443
|
| >d1hc7a2 d.104.1.1 (A:5-276) Prolyl-tRNA synthetase (ProRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Prolyl-tRNA synthetase (ProRS) species: Thermus thermophilus [TaxId: 274]
Probab=98.87 E-value=3.4e-09 Score=115.11 Aligned_cols=125 Identities=13% Similarity=0.103 Sum_probs=98.4
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCC---CcccccceEEEeccCC----ceeeecCCC
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGD---CPQFKRNTVKLLTHGG----DLLELSHEL 783 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~---~~~~~~~my~f~D~~G----~~laLRPD~ 783 (1170)
.+|+..|+|..+++++.|++.+++.+.++||++|.||.+ .+... .+...++||++.+.++ +.++|||.-
T Consensus 29 ~~G~~~~lP~G~~l~~~l~~~~~~~~~~~G~~eV~~P~l~~~~l~~~sg~~~~~~~~~m~~~~~~~~~~~~~~~~L~pt~ 108 (272)
T d1hc7a2 29 VRGTIVVRPYGYAIWENIQQVLDRMFKETGHQNAYFPLFIPMSFLRKEAEHVEGFSPELAVVTHAGGEELEEPLAVRPTS 108 (272)
T ss_dssp STTCEEECHHHHHHHHHHHHHHHHHHHHTTCEECBCCSEEESTTC---------CCTTCEEEEEESSSEEEEEEEECSCS
T ss_pred CCCeEEECccHHHHHHHHHHHHHHHHHHcCCeEEeeccccchHHhhhcccchhhcccceeeeeccccccccchhhccccc
Confidence 479999999999999999999999999999999999988 22222 4557889999988764 569999988
Q ss_pred CHHHHHHHHh----CCCCceeEEEecCeEEcCCCCC---CCCceeEeEEEEeCCCCcccHHHH
Q 001059 784 RLPFIRWAIS----NQKSSFKRYEISSVYRRAIGHS---PPNRYLQGDFDIIGGASALTEAEV 839 (1170)
Q Consensus 784 T~~iaR~~~~----~~~~P~r~~Y~g~VfR~e~~~~---~~~ef~Q~GvEiiG~~~~~aDaEv 839 (1170)
+++++.++.. ++..|+|+|+++++||+|.... ++++|.|.+++.+......++.|.
T Consensus 109 e~~~~~~~~~~~~s~~~LPlr~~~~~~~fR~E~~~~g~~r~r~~~~~~~~~~~~~~~~~~~~~ 171 (272)
T d1hc7a2 109 ETVIGYMWSKWIRSWRDLPQLLNQWGNVVRWEMRTRPFLRTSEFLWQEGHTAHATREEAEEEV 171 (272)
T ss_dssp HHHHHHHHHHHCCBGGGCCEEEEEEEEEECCCSSCBTTTBCSEEEEEEEEEEESSHHHHHHHH
T ss_pred ccceeehhhceeccccccceeeeecccccccccccccccceEEEEEEhhhhhhcccccchhHH
Confidence 8888877765 3457999999999999986442 344599999999976655555443
|
| >d2daxa1 d.20.1.3 (A:8-147) Uncharacterized protein C21orf6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: Uncharacterized protein C21orf6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.70 E-value=1e-08 Score=99.81 Aligned_cols=76 Identities=22% Similarity=0.170 Sum_probs=68.2
Q ss_pred CCccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhh-hhCCCeEEEeeHHHHHHHHhhhCCCCCCC
Q 001059 5 DLDVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN-AREGRVMIFNLVEAAQEFLSEIVPLGQSN 83 (1170)
Q Consensus 5 ~~~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~en-l~~gm~miftl~~~~~e~l~~~~~~~~~~ 83 (1170)
+..+.+.|+|++|++||+++|.+.+.+. +++......|++.|.+++++| + |++|||++|+.+||.+..++..+.+-
T Consensus 63 ~~~~~l~L~~~lP~~YP~~~P~i~l~~~-~l~~~~~~~l~~~l~~~~~~~~~--Ge~~if~lve~lqe~~~~~~~~~~~~ 139 (140)
T d2daxa1 63 EKMAMFSLACILPFKYPAVLPEITVRSV-LLSRSQQTQLNTDLTAFLQKHCH--GDVCILNATEWVREHASGYVSRDTSS 139 (140)
T ss_dssp TCEEEEEEEEEECSSTTSSCCCCEEECT-TSCHHHHHHHHHHHHHHHHHSSC--SSCCSHHHHHHHHHHHHHHCCCCCCC
T ss_pred ccCceEEEEEEecCcCCCcCCceeccCC-CCCHHHHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHhccCCCC
Confidence 3468899999999999999999999875 788888999999999999887 6 99999999999999999999877653
|
| >d2dawa1 d.20.1.3 (A:8-148) RWD domain-containing protein 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: UBC-like superfamily: UBC-like family: RWD domain domain: RWD domain-containing protein 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.60 E-value=1.4e-08 Score=99.13 Aligned_cols=72 Identities=17% Similarity=0.086 Sum_probs=65.3
Q ss_pred ccEEEEEEEeCCCCCCCCCceeeecCCCCCHHHHHHHHHHHHHHHHhh-hhCCCeEEEeeHHHHHHHHhhhCCCCC
Q 001059 7 DVSALLLVRCLPGYPYKCPKLQITPEKGLTKSDADNLLCLLQDQANSN-AREGRVMIFNLVEAAQEFLSEIVPLGQ 81 (1170)
Q Consensus 7 ~~~~~l~~~~~~~yp~~~p~~~i~~~~~~~~~~~~~l~~~l~~~~~en-l~~gm~miftl~~~~~e~l~~~~~~~~ 81 (1170)
.+.+.|.|++|++||+++|.+.+.+ .+++......|.+.|.+.+++| + ||+|||++|+.+||-+..++...+
T Consensus 67 ~~~i~L~~~lp~~YP~~~P~i~~~~-~~l~~~~~~~l~~~l~~~~~e~~~--Ge~mif~lv~~lqe~~~~~l~~~~ 139 (141)
T d2dawa1 67 KVKIDLQVTMPHSYPYLALQLFGRS-SELDRHQQLLLNKGLTSYIGTFDP--GELCVCAAIQWLQDNSASYFLNRK 139 (141)
T ss_dssp TEEEEEEEEECSSTTSSCCEEEEEC-SSSCHHHHHHHHHHHHHHHTTSCT--TSCSHHHHHHHHHHTTHHHHCCCC
T ss_pred cceEEEEEEeCCCCCCCCCCceeec-cccCHHHHHHHHHHHHHHHHHhcC--CccHHHHHHHHHHHHHHHHHhhcc
Confidence 4779999999999999999999887 6799999999999999999887 8 999999999999999988876543
|
| >d1g5ha2 d.104.1.1 (A:41-330) The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: The aaRS-like accessory subunit of mitochondrial polymerase gamma, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=97.90 E-value=5.6e-06 Score=89.79 Aligned_cols=140 Identities=9% Similarity=0.012 Sum_probs=90.9
Q ss_pred ccc-cccchhhhhhhhHHhHHHHHHHHcCCccccccce----eccCCCcccccceEEEe---------------------
Q 001059 717 SSI-QYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YLLGDCPQFKRNTVKLL--------------------- 770 (1170)
Q Consensus 717 G~~-D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~~~~~~~~~~~my~f~--------------------- 770 (1170)
|.. ||.|..+.+++.|++.+++.|.. .+..|.+|.. .+...+.... |+..
T Consensus 28 g~~~dyGP~G~~Lk~ni~~~w~~~~v~-~~~~v~~~d~~~~~~~~~sgh~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (290)
T d1g5ha2 28 GCHARFGPLGVELRKNLASQWWSSMVV-FREQVFAVDSLHQEPGSSQPRDSA---FRLVSPESIREILQDREPSKEQLVA 103 (290)
T ss_dssp CCSCCBCHHHHHHHHHHHHHHHHHHTT-TCTTEEECCCCSEECCCCSSCCCC---CEEECHHHHHHHHCC---CHHHHHH
T ss_pred ccccccCCcHHHHHHHHHHHHHHHHHh-ccCceeeccccccccCCCccccch---hhhccccccccccccccchhhhhhc
Confidence 444 89999999999999999998754 3356666654 1111111110 1111
Q ss_pred ---ccCCceeeecCCCCHH----HHHHH-HhCCCCceeEEEecCeEEcCCCC-------CCCCceeEeEEEEeCCCCccc
Q 001059 771 ---THGGDLLELSHELRLP----FIRWA-ISNQKSSFKRYEISSVYRRAIGH-------SPPNRYLQGDFDIIGGASALT 835 (1170)
Q Consensus 771 ---D~~G~~laLRPD~T~~----iaR~~-~~~~~~P~r~~Y~g~VfR~e~~~-------~~~~ef~Q~GvEiiG~~~~~a 835 (1170)
.-++....|||+.... +.+.. .+++..|++++++|++||+|... -|.+||+|+.+++|+.++...
T Consensus 104 ~~~~~~~~~~yLRPetaqg~~~~fkn~~~~~~~~LPf~iaq~g~~fR~E~~~~~~~~gl~RvReF~q~E~~~F~~pe~~~ 183 (290)
T d1g5ha2 104 FLENLLKTSGKLRATLLHGALEHYVNCLDLVNRKLPFGLAQIGVCFHPVSNSNQTPSSVTRVGEKTEASLVWFTPTRTSS 183 (290)
T ss_dssp HHHHHHHHSCEECSCSHHHHHHTHHHHHHHTTTBSCEEEEEEEEEEEEEC---------CEEEEEEEEEEEEEECHHHHH
T ss_pred ceeccccccceeccccchhHHHHHHHHHhhccCCCCcEEEEeccccccccccCCcccccceeeEeEeeeeEEEeCCcchH
Confidence 1123456799954432 33433 23667899999999999975422 244679999999999765533
Q ss_pred --HHHHHHHHHHHHHHcCCCcceEEEeC
Q 001059 836 --EAEVLKVTMDIVTRFFHAESCDIHLN 861 (1170)
Q Consensus 836 --DaEvi~la~~~l~~lgi~~~~~i~lg 861 (1170)
-...+..+.+.++.||+.. -.+.+.
T Consensus 184 ~~~~~~~~~~~~~~~~lGi~~-~~~~~~ 210 (290)
T d1g5ha2 184 QWLDFWLRHRLLWWRKFAMSP-SNFSSA 210 (290)
T ss_dssp HHHHHHHHHHHHHHHTTCSSG-GGEEEE
T ss_pred HHHHHHHHHHHHHHHHcCCCh-hheeec
Confidence 3578999999999999975 344443
|
| >d1seta2 d.104.1.1 (A:111-421) Seryl-tRNA synthetase (SerRS) {Thermus thermophilus, strain hb27 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Seryl-tRNA synthetase (SerRS) species: Thermus thermophilus, strain hb27 [TaxId: 274]
Probab=97.75 E-value=4.2e-05 Score=83.31 Aligned_cols=137 Identities=9% Similarity=0.104 Sum_probs=101.3
Q ss_pred cccccchhhhhhhhHHhHHHHHHHHcCCccccccce----ec--cCCCcccccceEEEeccCCceeeecCCCCHHHHHHH
Q 001059 718 SIQYSDLDTELRDYVVQVTKEMFRQHCAKHLEIEPM----YL--LGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWA 791 (1170)
Q Consensus 718 ~~D~lp~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~----~~--~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~ 791 (1170)
...+.+..+.+.+.+.+...+...+.||++|.+|.| .+ .+..+..+.++|+..+ +.+.|+|.--++++-+.
T Consensus 48 fy~l~g~~a~Le~AL~~~~ld~~~~~gy~~v~~P~lv~~~~~~~~G~~p~f~~~~y~~~~---~~~~LipTsE~~l~~~~ 124 (311)
T d1seta2 48 SYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRDQVWAIAE---TDLYLTGTAEVVLNALH 124 (311)
T ss_dssp CCCEEHHHHHHHHHHHHHHHHHHHHTTCEEEECCSEEEHHHHHHHTCTTTTGGGSCBBTT---SSEEECSSTHHHHHHTT
T ss_pred eEEEECHHHHHHHHHHHHHHHhhhcccceEEeechhhccchhhhcccccccccccccccc---cceeecccccchhhhhh
Confidence 334446668888999999999999999999999999 22 2335667888997643 56899996667766544
Q ss_pred HhC----CCCceeEEEecCeEEcCCCC--------CCCCceeEeEEEEeCCCCcc-cH---HHHHHHHHHHHHHcCCCcc
Q 001059 792 ISN----QKSSFKRYEISSVYRRAIGH--------SPPNRYLQGDFDIIGGASAL-TE---AEVLKVTMDIVTRFFHAES 855 (1170)
Q Consensus 792 ~~~----~~~P~r~~Y~g~VfR~e~~~--------~~~~ef~Q~GvEiiG~~~~~-aD---aEvi~la~~~l~~lgi~~~ 855 (1170)
... ...|+|++..+++||+|... -|.++|..+...++...+++ ++ .|++.++.++++.|++.
T Consensus 125 ~~~i~~~~~LPlr~~~~s~cfR~Eag~~g~~trGL~RvhQF~kvE~~~~~~~~~e~s~~~~~~~~~~~~~~~~~L~lp-- 202 (311)
T d1seta2 125 SGEILPYEALPLRYAGYAPAFRSEAGSFGKDVRGLMRVHQFHKVEQYVLTEASLEASDRAFQELLENAEEILRLLELP-- 202 (311)
T ss_dssp TTCEEEGGGCSEEEEEEEEEECCCCSCTTSSCSTTSSCSEEEEEEEEEEECSCHHHHHHHHHHHHHHHHHHHHHTTCC--
T ss_pred hhhhhhhhhccceEEeecccchhhhccccccchhhhhhcccchhhhheeeccccccchhHHHHHHHHHHHHHHhhCCc--
Confidence 331 23599999999999998533 23345888888888776653 33 37899999999999996
Q ss_pred eEEE
Q 001059 856 CDIH 859 (1170)
Q Consensus 856 ~~i~ 859 (1170)
+++.
T Consensus 203 yrvv 206 (311)
T d1seta2 203 YRLV 206 (311)
T ss_dssp EEEE
T ss_pred chhc
Confidence 5554
|
| >d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Type IIIa 3',5"-aminoglycoside phosphotransferase species: Enterococcus faecalis [TaxId: 1351]
Probab=97.55 E-value=0.00015 Score=76.54 Aligned_cols=140 Identities=14% Similarity=0.101 Sum_probs=85.1
Q ss_pred ccCCceEEeeeccCCcEEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhcc-CCCceeEEEEEeecCcccc
Q 001059 353 YLNDFEELQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQ-HQHVVRYYQAWFETGVADF 431 (1170)
Q Consensus 353 ~~~~y~~~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~-HpnIV~l~~~~~e~~~~~~ 431 (1170)
.++.|+..+..+.++.+.||+... +++.+++|........ ....+.+|+..++.+. +--+.+++....
T Consensus 12 ~~~~~~~~~~~~G~s~~~v~rv~~--~~~~~vlk~~~~~~~~--~~~~~~~E~~~l~~l~~~vpvP~vl~~~~------- 80 (263)
T d1j7la_ 12 LIEKYRCVKDTEGMSPAKVYKLVG--ENENLYLKMTDSRYKG--TTYDVEREKDMMLWLEGKLPVPKVLHFER------- 80 (263)
T ss_dssp HHTTSEEEECSCCCSSSEEEEEEC--SSCEEEEEEECGGGTT--STTCHHHHHHHHHHHTTTSCCCCEEEEEE-------
T ss_pred hhhceEEEEcCCCCCCCcEEEEEe--CCCeEEEEEcCCCccc--chhhHHHHHHHHHHHhccCCCCcEEEEEe-------
Confidence 346677777655555678998753 5777889987543221 1234678888888774 222445554331
Q ss_pred CCCCCCCCCcccccccccccccccccccccccccccEEEEEeeccCC-cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH
Q 001059 432 DGDSMWGSGTLASSTFSNRAASSADVTGQENKLESTYLYIQMEYCPR-TLRQVFESYDHFDKELAWHLFRQIVEGLAHIH 510 (1170)
Q Consensus 432 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~iVmEy~~g-sL~~~l~~~~~l~e~~~~~i~~qI~~gL~yLH 510 (1170)
.....|+||++++| .+....... .....++.++...++.||
T Consensus 81 ---------------------------------~~~~~~lv~~~l~G~~~~~~~~~~-----~~~~~~~~~l~~~l~~lH 122 (263)
T d1j7la_ 81 ---------------------------------HDGWSNLLMSEADGVLCSEEYEDE-----QSPEKIIELYAECIRLFH 122 (263)
T ss_dssp ---------------------------------ETTEEEEEEECCSSEEHHHHTTTC-----SCHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------cCCceEEEEEeccccccccccccc-----ccHHHHHHHHHHHHHHHh
Confidence 13456899999987 444332111 111122333333333333
Q ss_pred h-----------------------------------------------------------CCccccCCCCCceeecCCCC
Q 001059 511 G-----------------------------------------------------------QGIIHRDLTPNNIFFDARND 531 (1170)
Q Consensus 511 s-----------------------------------------------------------~gIiHrDLKp~NILi~~~~~ 531 (1170)
+ ..++|+|+.|.|||+++++.
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~HgD~~~~Nil~~~~~~ 202 (263)
T d1j7la_ 123 SIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKV 202 (263)
T ss_dssp TSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCCGGGGSTTCSCSSHHHHHHHHHHSCCCCCEEEECSCCCTTSEEEETTEE
T ss_pred ccCccccccCcchhhhhhhHHHHHHHHhhhhhhhcccccccchHHHHHHHHHHhcCCcCCcEEEEeeccCcceeecCCce
Confidence 2 12799999999999997766
Q ss_pred EEEeecCcch
Q 001059 532 IKIGDFGLAK 541 (1170)
Q Consensus 532 vKL~DFGlA~ 541 (1170)
+-|.||+.+.
T Consensus 203 ~~lIDwe~a~ 212 (263)
T d1j7la_ 203 SGFIDLGRSG 212 (263)
T ss_dssp EEECCCTTCE
T ss_pred EEEeechhcc
Confidence 7799999886
|
| >d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Methylthioribose kinase MtnK species: Bacillus subtilis [TaxId: 1423]
Probab=97.38 E-value=0.00024 Score=80.14 Aligned_cols=63 Identities=22% Similarity=0.210 Sum_probs=38.5
Q ss_pred EeeeccCCcEEEEEEEEccCCcEEEEEEEecC----CC-ChhhHHHHHHHHHHHHhcc-C--CCceeEEEE
Q 001059 360 LQPLGHGGFGHVVLCKNKLDGRHYAVKKIRLK----DK-SLPVNDRILREVATLSRLQ-H--QHVVRYYQA 422 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~tg~~vAVK~i~~~----~~-~~~~~~~~~~Ev~iL~~l~-H--pnIV~l~~~ 422 (1170)
.+.||.|....||++....+|+.|+||.-... .. ......+..+|...|+.+. + ..+.+++.+
T Consensus 31 ~~eig~G~~N~vfrV~~~~~~~svivKqa~p~~r~~g~~~~~~~~R~~~E~~~L~~~~~~~p~~vP~v~~~ 101 (392)
T d2pula1 31 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS 101 (392)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCGGGC--CCCCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE
T ss_pred EEEeCCCceEeEEEEEeCCCCeEEEEecCCchhcccCCCCCCCHHHHHHHHHHHHHhhhhCCCCcceEEEE
Confidence 46789999999999998777889999975321 11 1112345667888888773 2 345556543
|
| >d1jjca_ d.104.1.1 (A:) Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Phenyl-tRNA synthetase (PheRS) alpha subunit, PheS species: Thermus thermophilus [TaxId: 274]
Probab=97.22 E-value=0.00094 Score=70.15 Aligned_cols=122 Identities=14% Similarity=0.135 Sum_probs=85.0
Q ss_pred hhhHHhHHHHHHHHcCCccccccce---------eccCCCcc--cccceEEEeccC-----------CceeeecCCCCHH
Q 001059 729 RDYVVQVTKEMFRQHCAKHLEIEPM---------YLLGDCPQ--FKRNTVKLLTHG-----------GDLLELSHELRLP 786 (1170)
Q Consensus 729 ~~~I~~~i~~~f~~~Gy~~I~tP~~---------~~~~~~~~--~~~~my~f~D~~-----------G~~laLRPD~T~~ 786 (1170)
...+.+.++++|.+.||++++.|.+ +....... .....|-+.+.. ...++||.-.|+-
T Consensus 19 l~~~~~~i~~if~~~GF~~~~gp~ies~~~NFDaLn~P~dHPAR~~~DTfYi~~~~~~~~~~~~~~~~~~~lLRTHTS~~ 98 (266)
T d1jjca_ 19 ITLMERELVEIFRALGYQAVEGPEVESEFFNFDALNIPEHHPARDMWDTFWLTGEGFRLEGPLGEEVEGRLLLRTHTSPM 98 (266)
T ss_dssp HHHHHHHHHHHHHTTTCEECCCCSEEEHHHHTGGGTCCTTSGGGGGSCCCBEECSSCCEECTTSCEECSCEEECSSSTHH
T ss_pred HHHHHHHHHHHHHHcCCeEeeCCccccchhhhhcccCCcccchhcccceEEEecccccccCcccccchhhhhhccCCcHH
Confidence 4568888999999999999999988 11111111 123345454432 2467999999988
Q ss_pred HHHHHHhCCCCceeEEEecCeEEcCC-CCCCCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHHcCCC
Q 001059 787 FIRWAISNQKSSFKRYEISSVYRRAI-GHSPPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTRFFHA 853 (1170)
Q Consensus 787 iaR~~~~~~~~P~r~~Y~g~VfR~e~-~~~~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~lgi~ 853 (1170)
-+|.+..+ ..|.|+++.|+|||++. ......+|+|+..=+++..-..+ ++...+.++++.++..
T Consensus 99 q~r~~~~~-~~p~~~~~~g~VyRrd~iD~tH~p~FhQ~eg~~vd~~~~~~--~Lk~~l~~~~~~~f~~ 163 (266)
T d1jjca_ 99 QVRYMVAH-TPPFRIVVPGRVFRFEQTDATHEAVFHQLEGLVVGEGIAMA--HLKGAIYELAQALFGP 163 (266)
T ss_dssp HHHHHHHS-CSSEEEEEEEEEECCSCCCSSCCSEEEEEEEEEEETTCCHH--HHHHHHHHHHHHHHCT
T ss_pred HHHHHhcc-CCCceEEecccceecCCCCCcccccceeeeeeeccccccHH--HHHHHHHHHHHHhcCC
Confidence 88987664 45999999999999864 44566679999998887654443 4556666777766443
|
| >d1c0aa3 d.104.1.1 (A:107-287,A:421-585) Aspartyl-tRNA synthetase (AspRS) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Escherichia coli [TaxId: 562]
Probab=97.19 E-value=0.00096 Score=73.73 Aligned_cols=102 Identities=14% Similarity=0.099 Sum_probs=71.2
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEE-eccCCceeeecCCCCHHHHHHHHhCCCCceeEEE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRYE 803 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f-~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y 803 (1170)
-.+++..|.+.+++.|...||-||+||++.-... +.. ...+.+ .+..|+..-|+---....-|.++.. =-|+|+
T Consensus 31 ilr~Rs~i~~~iR~ff~~~gFlEV~TPiL~~~~~-~g~-~~~~~~~~~~~~~~~~L~~Spel~lk~ll~~g---~~~Vf~ 105 (346)
T d1c0aa3 31 RLKTRAKITSLVRRFMDDHGFLDIETPMLTKATP-EGA-RDYLVPSRVHKGKFYALPQSPQLFKQLLMMSG---FDRYYQ 105 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCS-SSS-CCCEEECSSSTTCEEECCSCSHHHHHHHHHTT---CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCC-ccc-cccccccccCCCccccCCcCHHHHHHHHhhcC---CCceEE
Confidence 3568889999999999999999999999833222 111 223333 3345777778865555555555532 239999
Q ss_pred ecCeEEcCCCCCCC-CceeEeEEEEeCCC
Q 001059 804 ISSVYRRAIGHSPP-NRYLQGDFDIIGGA 831 (1170)
Q Consensus 804 ~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~ 831 (1170)
+|+|||.|....++ -||+++.+|..+.+
T Consensus 106 i~~~FR~E~~~~~H~~EFtmLE~e~a~~~ 134 (346)
T d1c0aa3 106 IVKCFRDEDLRADRQPEFTQIDVETSFMT 134 (346)
T ss_dssp EEEEECCCCCBTTBCSEEEEEEEEEESCC
T ss_pred EeeeccccccCchhhhHhhhhcccccccc
Confidence 99999997654333 47999999988753
|
| >d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]
Probab=96.94 E-value=0.0013 Score=68.48 Aligned_cols=28 Identities=21% Similarity=0.164 Sum_probs=25.3
Q ss_pred ccccCCCCCceeecCCCCEEEeecCcch
Q 001059 514 IIHRDLTPNNIFFDARNDIKIGDFGLAK 541 (1170)
Q Consensus 514 IiHrDLKp~NILi~~~~~vKL~DFGlA~ 541 (1170)
++|+|+.|.|||++.+..+-|+||+.+.
T Consensus 177 liHgD~~~~Nvl~~~~~~~~iID~~~~~ 204 (255)
T d1nd4a_ 177 VTHGDACLPNIMVENGRFSGFIDCGRLG 204 (255)
T ss_dssp EECSSCCGGGEEEETTEEEEECCCTTCE
T ss_pred EEeCCCCCcceEEeCCceEEEEEchhcc
Confidence 7999999999999987667899999876
|
| >d1atia2 d.104.1.1 (A:1-394) Glycyl-tRNA synthetase (GlyRS) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Glycyl-tRNA synthetase (GlyRS) species: Thermus thermophilus [TaxId: 274]
Probab=96.87 E-value=0.0011 Score=72.94 Aligned_cols=140 Identities=13% Similarity=0.044 Sum_probs=92.9
Q ss_pred CCccccccchhhhhhhhHHhHHHHHHH--HcCCccccccce------eccCC--------------C---------cc--
Q 001059 715 NTSSIQYSDLDTELRDYVVQVTKEMFR--QHCAKHLEIEPM------YLLGD--------------C---------PQ-- 761 (1170)
Q Consensus 715 p~G~~D~lp~e~~~~~~I~~~i~~~f~--~~Gy~~I~tP~~------~~~~~--------------~---------~~-- 761 (1170)
-.|+.||-|..+++++.|.+.+++-|- +-+..+|++|++ ..+|+ + +.
T Consensus 28 laG~yDyGPlG~~LK~Ni~~~Ww~~fv~~~e~~~~id~~ii~p~~V~kASGHv~~F~D~mv~c~~~~~~~RaD~l~e~~~ 107 (394)
T d1atia2 28 LQGVYDYGPLGVELKNNLKQAWWRRNVYERDDMEGLDASVLTHRLVLHYSGHEATFADPMVDNRITKKRYRLDHLLKEQP 107 (394)
T ss_dssp CTTCEEECHHHHHHHHHHHHHHHHHHTTSCSSEEEEBCCSEEETTHHHHTSHHHHCEEEEEEC-----------------
T ss_pred cccccCcCccHHHHHHHHHHHHHHHHhhccCCEEEecccccCCHHHhhhcCCCCCCcccccccCCCCceecchhHHhhhh
Confidence 469999999999999999999988774 568888999988 01111 0 00
Q ss_pred --------------------------------------------------------cccceEEE-eccCC---ceeeecC
Q 001059 762 --------------------------------------------------------FKRNTVKL-LTHGG---DLLELSH 781 (1170)
Q Consensus 762 --------------------------------------------------------~~~~my~f-~D~~G---~~laLRP 781 (1170)
.-+.||+. +.+.+ ...-|||
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~~g~~~~~t~~~~FNLMF~T~iGp~~~~~~~~yLRP 187 (394)
T d1atia2 108 EEVLKRLYRAMEVEEENLHALVQAMMQAPERAGGAMTAAGVLDPASGEPGDWTPPRYFNMMFQDLRGPRGGRGLLAYLRP 187 (394)
T ss_dssp ---------------------------------------------------CCCCEEEECBEEEECSSCCCGGGEEEECS
T ss_pred hhhhhhhhhhhhhhhhhHHHHHHHHhhChHhhhhhHHhhCCCCCCCCCcCCcCccchhhhhccccccccccccceeEECh
Confidence 01223321 11212 2456999
Q ss_pred CCCH----HHHHHHHh-CCCCceeEEEecCeEEcCC-CC---CCCCceeEeEEEEeCCCCcccH--HHHHHHHHHHHHHc
Q 001059 782 ELRL----PFIRWAIS-NQKSSFKRYEISSVYRRAI-GH---SPPNRYLQGDFDIIGGASALTE--AEVLKVTMDIVTRF 850 (1170)
Q Consensus 782 D~T~----~iaR~~~~-~~~~P~r~~Y~g~VfR~e~-~~---~~~~ef~Q~GvEiiG~~~~~aD--aEvi~la~~~l~~l 850 (1170)
+..- .+.+.+-. +...|+=..++|++||+|. |+ -|.|||+|+-+|+|-.++.... ..-+......+..+
T Consensus 188 ETAQGiFvnF~~~l~~~r~KlPFGiAQIGk~FRNEIsPr~~l~R~REF~q~EiE~Fv~P~~~~~~~~yw~~~~~~f~~~l 267 (394)
T d1atia2 188 ETAQGIFVNFKNVLDATSRKLGFGIAQIGKAFRNEITPRNFIFRVREFEQMEIEYFVRPGEDEYWHRYWVEERLKWWQEM 267 (394)
T ss_dssp SSHHHHHHTHHHHHHHHTCCSSEEEEEEEEEEBCCSSCCTGGGSCSEEEEEEEEEEECGGGHHHHHHHHHHHHHHHHHHT
T ss_pred hhhhHHHHHHHHHHHHcccCCCceeeeeccccccccCcccCCcccccceeeeeEEEEeCCcchHHHHHHHHHHHHHHHHh
Confidence 8663 34565544 4567999999999999975 33 3677899999999987654322 23345556666666
Q ss_pred CCCc
Q 001059 851 FHAE 854 (1170)
Q Consensus 851 gi~~ 854 (1170)
|+..
T Consensus 268 Gi~~ 271 (394)
T d1atia2 268 GLSR 271 (394)
T ss_dssp TCCG
T ss_pred cCCc
Confidence 6653
|
| >d1b8aa2 d.104.1.1 (A:104-438) Aspartyl-tRNA synthetase (AspRS) {Archaeon Pyrococcus kodakaraensis [TaxId: 311400]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Archaeon Pyrococcus kodakaraensis [TaxId: 311400]
Probab=96.85 E-value=0.0027 Score=69.68 Aligned_cols=100 Identities=12% Similarity=0.030 Sum_probs=71.2
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEEe
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 804 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y~ 804 (1170)
-.++|..|.+.+|+.|.+.||-||+||++.....+. ..+.|.+.. .++.+-||-.--...-|.++.. --|+|++
T Consensus 33 ~l~~Rs~i~~~iR~ff~~~gflEV~TPil~~~~~~~--~~~~f~~~~-~~~~~yL~~SpE~~lkrll~~g---~~~if~i 106 (335)
T d1b8aa2 33 IFKIRSSVFKAVRDFFHENGFIEIHTPKIIATATEG--GTELFPMKY-FEEDAFLAESPQLYKEIMMASG---LDRVYEI 106 (335)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESCCCSS--SSSCCEEEE-TTEEEEECSCSHHHHHHGGGTT---CCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCccCCch--hhhhccccc-cccccccccChHHHHHHHHhhh---hhhHHHh
Confidence 467888999999999999999999999984332211 223455443 4677889865555566666542 3499999
Q ss_pred cCeEEcCCCCC--CCCceeEeEEEEeCC
Q 001059 805 SSVYRRAIGHS--PPNRYLQGDFDIIGG 830 (1170)
Q Consensus 805 g~VfR~e~~~~--~~~ef~Q~GvEiiG~ 830 (1170)
|+|||+|.... ...||+|...+.-..
T Consensus 107 ~~~FR~e~~~~~rh~~Ef~~le~~~~~~ 134 (335)
T d1b8aa2 107 APIFRAEEHNTTRHLNEAWSIDSEMAFI 134 (335)
T ss_dssp EEEECCCSSCCSSCCSEEEEEEEEEESC
T ss_pred hcccccccccccccchHHHhhhHHHHHH
Confidence 99999976553 334899997776543
|
| >d1l0wa3 d.104.1.1 (A:105-294,A:415-580) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-1 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Thermus thermophilus, AspRS-1 [TaxId: 274]
Probab=96.81 E-value=0.0036 Score=69.24 Aligned_cols=103 Identities=12% Similarity=0.065 Sum_probs=71.4
Q ss_pred hhhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEE-eccCCceeeecCCCCHHHHHHHHhCCCCceeEE
Q 001059 724 LDTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKL-LTHGGDLLELSHELRLPFIRWAISNQKSSFKRY 802 (1170)
Q Consensus 724 ~e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f-~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~ 802 (1170)
.-.++|..|.+.+++.|...||-+|.||++.-... +.. ...|.. .+..|...-|+----...-|.++.. --|+|
T Consensus 38 ~ilr~Rs~i~~~iR~ff~~~gfiEV~TP~L~~~~~-eg~-~~~~~~~~~~~~~~~yL~~Spel~lk~ll~~g---~~~Vf 112 (356)
T d1l0wa3 38 ENLRLRHRVIKAIWDFLDREGFVQVETPFLTKSTP-EGA-RDFLVPYRHEPGLFYALPQSPQLFKQMLMVAG---LDRYF 112 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCEECCCCSSBCCCS-SSS-CCCEEECTTSTTEEEECCSCSHHHHHHHHHTT---CSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEEECCccccCCC-ccc-ccchhhhhcccccccCCCcChhHHHHHhhhcc---cCcEE
Confidence 34678899999999999999999999999732222 221 233332 3555666667654444444555532 24999
Q ss_pred EecCeEEcCCCCCCC-CceeEeEEEEeCCC
Q 001059 803 EISSVYRRAIGHSPP-NRYLQGDFDIIGGA 831 (1170)
Q Consensus 803 Y~g~VfR~e~~~~~~-~ef~Q~GvEiiG~~ 831 (1170)
++|++||.|....+. -||+++.+|..+.+
T Consensus 113 ~i~~~FRaE~~~t~H~~EFtmLE~e~~~~~ 142 (356)
T d1l0wa3 113 QIARCFRDEDLRADRQPDFTQLDLEMSFVE 142 (356)
T ss_dssp EEEEEECCCCCCSSCCSEEEEEEEEEESCC
T ss_pred EEeccccccccCCcchhhhhHHHHhhhHHH
Confidence 999999997655433 37999999999865
|
| >d1e1oa2 d.104.1.1 (A:161-502) Lysyl-tRNA synthetase (LysRS) {Escherichia coli, gene lysU [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Lysyl-tRNA synthetase (LysRS) species: Escherichia coli, gene lysU [TaxId: 562]
Probab=96.77 E-value=0.0036 Score=68.86 Aligned_cols=102 Identities=9% Similarity=0.016 Sum_probs=67.8
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEe-ccCCceeeecCCCCHHHHHHHHhCCCCceeEEE
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLL-THGGDLLELSHELRLPFIRWAISNQKSSFKRYE 803 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~-D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y 803 (1170)
-.++|..+...+++.|.+.||-+|.||++.....+. ..+.|.+. +..+...-|+----...-+.++.. --|+|+
T Consensus 22 ~~r~Rs~i~~~iR~ff~~~gFiEV~TPil~~~~~~~--~~~~f~~~~~~~~~~~yL~~Spql~~k~~l~~g---~~~vf~ 96 (342)
T d1e1oa2 22 TFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGA--SARPFITHHNALDLDMYLRIAPELYLKRLVVGG---FERVFE 96 (342)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCEECCCCSEESSCCSS--CCCCCEEEETTTTEEEEECSCSHHHHHHHHHHT---CCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCccccCCCC--CCcceeecccCCCcccccchhhHHHHHHHhhhc---ccceee
Confidence 366788999999999999999999999984332222 12334332 344556666653222222344432 249999
Q ss_pred ecCeEEcCCCCCC-CCceeEeEEEEeCCC
Q 001059 804 ISSVYRRAIGHSP-PNRYLQGDFDIIGGA 831 (1170)
Q Consensus 804 ~g~VfR~e~~~~~-~~ef~Q~GvEiiG~~ 831 (1170)
+|+|||.|....+ ..||+|+.+|.-+.+
T Consensus 97 i~p~FR~E~~~~rHl~EFtmlE~e~a~~~ 125 (342)
T d1e1oa2 97 INRNFRNEGISVRHNPEFTMMELYMAYAD 125 (342)
T ss_dssp EEEEECCCCCCC-CCSEEEEEEEEEESCC
T ss_pred eccccccccccccchHHHHHHHHHHHhhh
Confidence 9999998754332 237999999998864
|
| >d1eova2 d.104.1.1 (A:205-557) Aspartyl-tRNA synthetase (AspRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=96.76 E-value=0.0031 Score=69.69 Aligned_cols=102 Identities=9% Similarity=0.067 Sum_probs=68.7
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEEe
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 804 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y~ 804 (1170)
-.++|..|.+.+++.|.+.||-||+||++.....+. ..+.|...-.+ ...-||---=...-|.++.. =-|+|++
T Consensus 43 ilr~Rs~i~~~iR~ff~~~gflEV~TPiL~~~~~eg--~~~~f~~~~~~-~~~yL~~Spel~lk~ll~~g---~~~vf~I 116 (353)
T d1eova2 43 IFRIQAGVCELFREYLATKKFTEVHTPKLLGAPSEG--GSSVFEVTYFK-GKAYLAQSPQFNKQQLIVAD---FERVYEI 116 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCCSEESSCSSS--SSCCCEEEETT-EEEEECSCTHHHHHHHHHTT---CCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCCcc--hhccccceeeC-Ccceeccchhhhhhhhhhcc---cccceee
Confidence 366788999999999999999999999984332211 22345443333 33447653333344665532 2389999
Q ss_pred cCeEEcCCCCC-CC-CceeEeEEEEeCCCC
Q 001059 805 SSVYRRAIGHS-PP-NRYLQGDFDIIGGAS 832 (1170)
Q Consensus 805 g~VfR~e~~~~-~~-~ef~Q~GvEiiG~~~ 832 (1170)
|++||+|.... +. -||+|+.+|.-+.+.
T Consensus 117 ~~~FR~E~~~~~rH~pEFtmLE~y~a~~d~ 146 (353)
T d1eova2 117 GPVFRAENSNTHRHMTEFTGLDMEMAFEEH 146 (353)
T ss_dssp EEEECCCCCCCTTCCSEEEEEEEEEECSSC
T ss_pred chhhhccccccccccchhcccccccccchh
Confidence 99999976554 33 389999999877553
|
| >d1nnha_ d.104.1.1 (A:) Hypothetical protein PF1951 {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Hypothetical protein PF1951 species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=96.70 E-value=0.0029 Score=67.92 Aligned_cols=117 Identities=12% Similarity=0.074 Sum_probs=74.7
Q ss_pred hhhhhhhHHhHHHHHHHHcCCcccccccee--ccCC---CcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCce
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMY--LLGD---CPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSF 799 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~--~~~~---~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~ 799 (1170)
-.++|..|.+.+|+.|...||.||.||++. ..+. +....-..|+ .+..|+.+-|+.---.-.-|.++... -
T Consensus 13 il~~Rs~i~~~iR~ff~~~gf~EV~tPil~~~~~~~~~~~~~~~~~~~~-~~~~~~~~yL~~SPel~lk~lla~g~---~ 88 (293)
T d1nnha_ 13 TLDIQTKILEYMTDFFVKEGFKWLLPVIISPITDPLWPDPAGEGMEPAE-VEIYGVKMRLTHSMILHKQLAIAMGL---K 88 (293)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEEECCCCEESCCCCCCSCTTCCCCCCCE-EEETTEEEEECSCSHHHHHHHHHTTC---C
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEcCCcccccCCCCCCccccCcccccc-ccCCCceeecccChhhhHHHHHHhcc---c
Confidence 356788999999999999999999999982 1111 1111122222 24447888888544334445555422 3
Q ss_pred eEEEecCeEEcCCCC--C--CCCceeEeEEEEeCCCCcccHHHHHHHHHHHHHH
Q 001059 800 KRYEISSVYRRAIGH--S--PPNRYLQGDFDIIGGASALTEAEVLKVTMDIVTR 849 (1170)
Q Consensus 800 r~~Y~g~VfR~e~~~--~--~~~ef~Q~GvEiiG~~~~~aDaEvi~la~~~l~~ 849 (1170)
|+|++|+|||.|... + ..-||+|+.+|.-+.+ . -+++.++-+++..
T Consensus 89 ~Vf~I~~~FR~E~~~s~t~RH~~EFtmLE~e~~~~d-~---~d~m~~~e~li~~ 138 (293)
T d1nnha_ 89 KIFVLSPNIRLESRQKDDGRHAYEFTQLDFEVERAK-M---EDIMRLIERLVYG 138 (293)
T ss_dssp EEEEEEEEECCCCGGGCSSSCCSEEEEEEEEEETCC-H---HHHHHHHHHHHHH
T ss_pred cceeechhhhcCcccCCCCccchhhhhhcccccccc-H---HHHHHHHHHHHHH
Confidence 899999999987432 1 2247999999976532 1 1466666555543
|
| >d1n9wa2 d.104.1.1 (A:111-414) Aspartyl-tRNA synthetase (AspRS) {Thermus thermophilus, AspRS-2 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Aspartyl-tRNA synthetase (AspRS) species: Thermus thermophilus, AspRS-2 [TaxId: 274]
Probab=95.47 E-value=0.0095 Score=64.18 Aligned_cols=100 Identities=14% Similarity=0.098 Sum_probs=48.4
Q ss_pred hhhhhhhHHhHHHHHHHHcCCccccccceeccCCCcccccceEEEeccCCceeeecCCCCHHHHHHHHhCCCCceeEEEe
Q 001059 725 DTELRDYVVQVTKEMFRQHCAKHLEIEPMYLLGDCPQFKRNTVKLLTHGGDLLELSHELRLPFIRWAISNQKSSFKRYEI 804 (1170)
Q Consensus 725 e~~~~~~I~~~i~~~f~~~Gy~~I~tP~~~~~~~~~~~~~~my~f~D~~G~~laLRPD~T~~iaR~~~~~~~~P~r~~Y~ 804 (1170)
-.++|..|...+|+.|...||-||+||++.-.+. +...+.|.. +..|+.+-|+.-... ..|.++.. --|+|++
T Consensus 14 ~l~~Rs~i~~~iR~ff~~~gf~Ev~TP~l~~~~~--e~~~~~f~~-~~~~~~~~L~~Spel-~k~ll~~g---~~~if~i 86 (304)
T d1n9wa2 14 PLKVQAALVRGFRRYLDRQDFTEIFTPKVVRAGA--EGGSGLFGV-DYFEKRAYLAQSPQL-YKQIMVGV---FERVYEV 86 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCEECCCC-------------------------------CHH-HHHHHHHH---HSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCccCCCCC--CCCCceECC-cccccchhccccHHH-HHHHhhcc---cccceee
Confidence 3667889999999999999999999999833222 112234433 223445556553333 24555442 2279999
Q ss_pred cCeEEcCCCCC--CCCceeEeEEEEeCCC
Q 001059 805 SSVYRRAIGHS--PPNRYLQGDFDIIGGA 831 (1170)
Q Consensus 805 g~VfR~e~~~~--~~~ef~Q~GvEiiG~~ 831 (1170)
|+|||.|.... ...||+|..++.-...
T Consensus 87 ~~~FR~ee~~~~rh~~EF~~le~~~~~~~ 115 (304)
T d1n9wa2 87 APVWRMEEHHTSRHLNEYLSLDVEMGFIA 115 (304)
T ss_dssp EEC-------------CCEEEEEEEESCS
T ss_pred hhhcccccccccccccHHHHHHHHHhhhh
Confidence 99999875433 2348999999987543
|
| >d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: RdoA species: Escherichia coli [TaxId: 562]
Probab=95.31 E-value=0.04 Score=59.47 Aligned_cols=44 Identities=27% Similarity=0.335 Sum_probs=32.3
Q ss_pred EEEEEEEEccCCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCc
Q 001059 369 GHVVLCKNKLDGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHV 416 (1170)
Q Consensus 369 G~Vyka~~~~tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnI 416 (1170)
-.||++... +|..|++|+.+....+ ..++..|...+..|....|
T Consensus 36 N~vy~v~~~-dg~~~VlK~~rp~~~s---~~~i~~E~~~l~~L~~~gi 79 (325)
T d1zyla1 36 NRVYQFQDE-DRRRFVVKFYRPERWT---ADQILEEHQFALQLVNDEV 79 (325)
T ss_dssp SEEEEECCT-TCCCEEEEEECTTTSC---HHHHHHHHHHHHHHHHTTC
T ss_pred ceeEEEEcC-CCCEEEEEEeCCCCCC---HHHHHHHHHHHHHHHhcCC
Confidence 579998875 7899999997643333 4568889999988865443
|
| >d1nw1a_ d.144.1.8 (A:) Choline kinase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: Choline kinase domain: Choline kinase species: Caenorhabditis elegans [TaxId: 6239]
Probab=93.93 E-value=0.08 Score=58.62 Aligned_cols=60 Identities=12% Similarity=0.279 Sum_probs=40.1
Q ss_pred EeeeccCCcEEEEEEEEcc-------CCcEEEEEEEecCCCChhhHHHHHHHHHHHHhccCCCce-eEEEEE
Q 001059 360 LQPLGHGGFGHVVLCKNKL-------DGRHYAVKKIRLKDKSLPVNDRILREVATLSRLQHQHVV-RYYQAW 423 (1170)
Q Consensus 360 ~~~LG~G~fG~Vyka~~~~-------tg~~vAVK~i~~~~~~~~~~~~~~~Ev~iL~~l~HpnIV-~l~~~~ 423 (1170)
++.|+.|-.-.+|++.... ..+.|.+++.. .... .....+|..+++.+.-.++. ++++++
T Consensus 47 v~~l~GGltN~~y~v~~~~~~~~~~~~~~~vllRi~g-~~~~---~idr~~E~~i~~~ls~~gl~Pkll~~~ 114 (395)
T d1nw1a_ 47 ISRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYF-NPET---ESHLVAESVIFTLLSERHLGPKLYGIF 114 (395)
T ss_dssp EEEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEEC-SCCC---HHHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred EEEcCCccccceEEEEeCCCCccccCCCCcEEEEecC-Ccch---hhHHHHHHHHHHHHHhCCCCCeEEEEc
Confidence 4678889889999998753 24567777764 2222 23456899999988544444 677655
|
| >d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Protein kinase-like (PK-like) superfamily: Protein kinase-like (PK-like) family: APH phosphotransferases domain: Homoserine kinase ThrB species: Agrobacterium tumefaciens [TaxId: 358]
Probab=93.10 E-value=0.15 Score=54.17 Aligned_cols=31 Identities=35% Similarity=0.463 Sum_probs=27.7
Q ss_pred CCccccCCCCCceeecCCCCEEEeecCcchh
Q 001059 512 QGIIHRDLTPNNIFFDARNDIKIGDFGLAKF 542 (1170)
Q Consensus 512 ~gIiHrDLKp~NILi~~~~~vKL~DFGlA~~ 542 (1170)
.|+||+|+.+.||+++.+...-|.||+.|+.
T Consensus 183 ~giIHgDl~~dNvl~~~~~v~gvIDF~~~~~ 213 (316)
T d2ppqa1 183 AGVIHADLFQDNVFFLGDELSGLIDFYFACN 213 (316)
T ss_dssp EEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred cccccCCcchhhhhcccccceeEeccccccc
Confidence 4799999999999999887778999999873
|
| >d1v95a_ c.51.1.1 (A:) Nuclear receptor coactivator 5 (KIAA1637) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Anticodon-binding domain-like superfamily: Class II aaRS ABD-related family: Anticodon-binding domain of Class II aaRS domain: Nuclear receptor coactivator 5 (KIAA1637) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.93 E-value=0.47 Score=42.58 Aligned_cols=93 Identities=8% Similarity=0.035 Sum_probs=73.1
Q ss_pred ceEEEEEcCCCccHHHHHHHHHHHHHcCCeEEEeeC-CCCCHHHHHHHHHhCCCcEEEEEcCCcccCCeEEEEEcCCC--
Q 001059 1065 TSVLVCSRGGGGLLVERMELVAELWEENIKAQFVPV-PDPSLTEQYEYASEHDIKCLVILTDTGAQKGLVKVRHLDVK-- 1141 (1170)
Q Consensus 1065 ~~vlv~~~~~~~~~~~a~~ia~~LR~~Gi~v~~~~~-~~~~l~k~~~~A~~~gi~~~iiig~~e~~~~~v~vk~l~~~-- 1141 (1170)
.|.-|+..+ ++...+|-.+-.+||+.|+.|++.+- ++-.+.+.+....+.|.+|+|++-.+..+-..+||.-|-.-
T Consensus 9 ~DCeIivvn-k~~~~YAe~Ie~rL~~~Gl~vd~lf~n~dv~l~~aL~~vs~~G~~faIlVt~qn~~~~S~TvnIL~g~pq 87 (130)
T d1v95a_ 9 VDCSVIVVN-KQTKDYAESVGRKVRDLGMVVDLIFLNTEVSLSQALEDVSRGGSPFAIVITQQHQIHRSCTVNIMFGTPQ 87 (130)
T ss_dssp CTEEEEESS-SGGGHHHHHHHHHHHTTTCCEEEEECTTSSCHHHHHHHHHHHTCSEEEEECHHHHHHTEEEEEECSSSCC
T ss_pred cceEEEEEC-CccchHHHHHHHHHHhcCCEEEEEecCCcccHHHHHHHHHhCCCceEEEEeccchhhcceEeeeecCChH
Confidence 343344443 56788999999999999999997553 35679999999999999999999999888899999887543
Q ss_pred cccccchHHHHHHHHHH
Q 001059 1142 KEKEVQRESLVRFLLDA 1158 (1170)
Q Consensus 1142 eq~~v~~~~l~~~l~~~ 1158 (1170)
+-...|++|-+..+.+-
T Consensus 88 EHRNMPleDAl~lva~~ 104 (130)
T d1v95a_ 88 EHRNMPQADAMVLVARN 104 (130)
T ss_dssp EEEEEEHHHHHHHHHHH
T ss_pred HHHCCCHHHHHHHHHHH
Confidence 44556888877776543
|
| >d1jjcb5 d.104.1.1 (B:475-681) Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Class II aaRS and biotin synthetases superfamily: Class II aaRS and biotin synthetases family: Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain domain: Phenyl-tRNA synthetase (PheRS) beta subunit, PheT, central domain species: Thermus thermophilus [TaxId: 274]
Probab=91.45 E-value=0.56 Score=46.74 Aligned_cols=115 Identities=13% Similarity=0.038 Sum_probs=74.7
Q ss_pred hHHhHHHHHHHHcCCccccccceeccC---CCcccccceEEEeccCCcee-eecCCCCHHHHHHHHhCC----CCceeEE
Q 001059 731 YVVQVTKEMFRQHCAKHLEIEPMYLLG---DCPQFKRNTVKLLTHGGDLL-ELSHELRLPFIRWAISNQ----KSSFKRY 802 (1170)
Q Consensus 731 ~I~~~i~~~f~~~Gy~~I~tP~~~~~~---~~~~~~~~my~f~D~~G~~l-aLRPD~T~~iaR~~~~~~----~~P~r~~ 802 (1170)
..++++++.+...||.||.|-.|.-.. ... ..+...++..+-.+.+ +||+.+.+++.+.++.|. ...+|+|
T Consensus 19 ~~~~~ir~~L~~~Gf~Ev~tysf~s~~~~~~~~-~~~~~i~l~NPis~e~~~lR~sLlpgLL~~~~~N~~r~~~~~~~lF 97 (207)
T d1jjcb5 19 RKEQRLREVLSGLGFQEVYTYSFMDPEDARRFR-LDPPRLLLLNPLAPEKAALRTHLFPGLVRVLKENLDLDRPERALLF 97 (207)
T ss_dssp HHHHHHHHHHHHHTCEECCCCSEECTTHHHHTT-CCCCSCEESSCSSGGGSEECSCSHHHHHHHHHHHHHHSCCSEEEEE
T ss_pred HHHHHHHHHHHHCCcchhcCCCcCCHHHHHhhc-CCCCcEEEeCCcchhhhhhhhhcchHHHHHHHhCcccccccceeeE
Confidence 456778999999999999999982211 111 1233457777764444 799999999999988742 2358999
Q ss_pred EecCeEEcCCCCCCCCceeEeEEEEeCCCC-------cccHH-HHHHHHHHHHHHcCCC
Q 001059 803 EISSVYRRAIGHSPPNRYLQGDFDIIGGAS-------ALTEA-EVLKVTMDIVTRFFHA 853 (1170)
Q Consensus 803 Y~g~VfR~e~~~~~~~ef~Q~GvEiiG~~~-------~~aDa-Evi~la~~~l~~lgi~ 853 (1170)
.+|+||+... +-..+++ +.|... ...|. ++-.++..++..+|+.
T Consensus 98 EiG~vf~~~~------~~~~~~~-~~g~~~~~~~~~~~~~df~~~Kg~v~~ll~~lg~~ 149 (207)
T d1jjcb5 98 EVGRVFRERE------ETHLAGL-LFGEGVGLPWAKERLSGYFLLKGYLEALFARLGLA 149 (207)
T ss_dssp EEEEEESSSE------EEEEEEE-EEESCBSCTTSSCCBCHHHHHHHHHHHHHHHHTCC
T ss_pred eeeeeeeccc------cccchhh-hhhcccccccccccchhHHHHHHHHHHHHHhhhcc
Confidence 9999997421 2233333 333211 12343 5666677777777874
|