Citrus Sinensis ID: 001120
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1150 | 2.2.26 [Sep-21-2011] | |||||||
| Q15155 | 1222 | Nodal modulator 1 OS=Homo | yes | no | 0.841 | 0.792 | 0.313 | 1e-130 | |
| Q5JPE7 | 1267 | Nodal modulator 2 OS=Homo | yes | no | 0.841 | 0.764 | 0.314 | 1e-130 | |
| P69849 | 1222 | Nodal modulator 3 OS=Homo | yes | no | 0.841 | 0.792 | 0.314 | 1e-129 | |
| Q6GQT9 | 1214 | Nodal modulator 1 OS=Mus | yes | no | 0.848 | 0.803 | 0.308 | 1e-129 | |
| Q54CU4 | 11103 | Colossin-A OS=Dictyosteli | no | no | 0.245 | 0.025 | 0.260 | 2e-06 |
| >sp|Q15155|NOMO1_HUMAN Nodal modulator 1 OS=Homo sapiens GN=NOMO1 PE=1 SV=5 | Back alignment and function desciption |
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Score = 467 bits (1201), Expect = e-130, Method: Compositional matrix adjust.
Identities = 345/1101 (31%), Positives = 532/1101 (48%), Gaps = 133/1101 (12%)
Query: 33 EGSFVIKVNGPEGWSWNPDKVAVTVDDTG--CNGNEDINFRFTGFTLLGRVVGAIGGESC 90
+G F++K+ P GWS+ P V + VD C DINF FTGF++ G+V
Sbjct: 85 KGDFILKIEPPLGWSFEPTTVELHVDGVSDICTKGGDINFVFTGFSVNGKV--------- 135
Query: 91 LDKGG--GPSNVNVELLSHSGDL-ISSVITSSEGSYLFKNIIPGKYKLRASHPNLSVEVR 147
L KG GP+ V V L + + I S +T G + F ++PG Y++ A+HP +++
Sbjct: 136 LSKGQPLGPAGVQVSLRNTGTEAKIQSTVTQPGGKFAFFKVLPGDYEILATHPTWALK-E 194
Query: 148 GSTEVELGFENGEVDDIFFAPGYEIRGLVVAQGNPILGVHIYLYSDDVGKVDC------- 200
ST V + N GY + G V + G P+ GV L+S V K D
Sbjct: 195 ASTTVRVTNSNANAASPLIVAGYNVSGSVRSDGEPMKGVKFLLFSSLVTKEDVLGCNVSP 254
Query: 201 -----PQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLV 255
PQ LC+ VS DG F F S+P G Y ++P Y+GE FDV+PS +
Sbjct: 255 VPGFQPQDESLVY-----LCYTVSREDGSFSFYSLPSGGYTVIPFYRGERITFDVAPSRL 309
Query: 256 SMSVRHQHVTVPEKFQVTGFSVGGRVVD--ENDMGVEGVKILVDGHERSITDRDGYYKLD 313
+V H + + F V GFSV GRV++ E D GV + ++ + T DG ++L+
Sbjct: 310 DFTVEHDSLKIEPVFHVMGFSVTGRVLNGPEGD-GVPEAVVTLNNQIKVKTKADGSFRLE 368
Query: 314 QVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAISYDICG---VVR---TVGSGN 367
+T+ YTI A K H F + + PN +ADI A + +CG ++R TV N
Sbjct: 369 NITTGTYTIHAQKEHLYFETVT-IKIAPNTPQLADIIATGFSVCGQISIIRFPDTVKQMN 427
Query: 368 KVKVALTHGPDKVKPQVK-QTDNNGNFCFEVPPGEYRLSAMAATPESSSGILFLP-PYAD 425
K KV L+ DK K V +TD +G+FCF+ PG Y++ M E+ +G+ P +
Sbjct: 428 KYKVVLS-SQDKDKSLVTVETDAHGSFCFKAKPGTYKVQVMVPEAETRAGLTLKPQTFPL 486
Query: 426 VVVKSPLLNIEFSQALVNVLGNVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLTD--D 483
V P++++ F Q L +V G V+C + CG L+ VTL L ++ EK+++ L+ +
Sbjct: 487 TVTNRPMMDVAFVQFLASVSGKVSCLDTCGDLL-VTLQSLSRQ----GEKRSLQLSGKVN 541
Query: 484 SDQFLFRDVLPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWL 543
+ F F +VLPGKY++ + M ++WCW+ + V+V +D+ VEF Q GY L
Sbjct: 542 AMTFTFDNVLPGKYKISI---------MHEDWCWKNKSLEVEVLEDDMSAVEFRQTGYML 592
Query: 544 NVISTHDVDAYMTQQDGSHVPLKV---KKGSQHICVESPGVHNLHFVNP--CVFFGSPVL 598
+H + Q + + KG C+ PGV+ V P C F
Sbjct: 593 RCSLSHAITLEFYQDGNGRENVGIYNLSKGVNRFCLSKPGVYK---VTPRSCHRFEQAFY 649
Query: 599 KMDTSNPSPIYLKGEKYQLRGHI--------NVQSRSPI------------GVHEL-PEN 637
DTS+PS + L ++ + G I V +S I V EL E
Sbjct: 650 TYDTSSPSILTLTAIRHHVLGTITTDKMMDVTVTIKSSIDSEPALVLGPLKSVQELRREQ 709
Query: 638 IIVDILNGDGSISNRTTATLTSPANDQTSYAV------------YGFSLWANLGDQLTFV 685
+ +I + R T V Y FS WA G+++T
Sbjct: 710 QLAEI---EARRQEREKNGNEEGEERMTKPPVQEMVDELQGPFSYDFSYWARSGEKITVT 766
Query: 686 PRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTEGSVSPPLSGVNIRIIA 745
P K++LFYP + V+ + C + G+ GL+ EG + P L GV I I
Sbjct: 767 P------SSKELLFYPPSMEAVVSGESCPGKLIEIHGKAGLFLEGQIHPELEGVEIVI-- 818
Query: 746 AEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKPGYYLRQVGPN--SFSC 803
+E + L + T G++ GPL+ D+ Y V + K GY L V F
Sbjct: 819 SEKGASSPL------ITVFTDDKGAYSVGPLHSDLEYTVTSQKEGYVLTAVEGTIGDFKA 872
Query: 804 QKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPL 863
L+ +S I ++DD +P+P VLLSLSG +R+N ++ G F NL PG +Y +P+
Sbjct: 873 YALAGVSFEIKAEDD--QPLPGVLLSLSGGL-FRSNLLTQDNGILTFSNLSPGQYYFKPM 929
Query: 864 LKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKDGVSVEA--RSESK 921
+KE+ F P +Q IE+ G++ ++ R AYS GT++ L+G+P+ GV++EA +++
Sbjct: 930 MKEFRFEPSSQMIEVQEGQNLKITITGYRTAYSCYGTVSSLNGEPEQGVAMEAVGQNDCS 989
Query: 922 GYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGL 981
Y E+TVTD G +RLRGL P Y +++ + G+ IERA P ++VG+ DI +
Sbjct: 990 IYGEDTVTDEEGKFRLRGLLPGCVYHVQLKAE---GNDHIERALPHHRVIEVGNNDIDDV 1046
Query: 982 DFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLPMSNFFQVKDLP 1041
+ +VF Q + LSG+V + E L V++ + + +SL S FF L
Sbjct: 1047 NIIVFRQINQFDLSGNVITS--SEYLPTLWVKLYKSENLDNPIQTVSLGQSLFFHFPPLL 1104
Query: 1042 KG--KHLLQLRSSLPSSTHRF 1060
+ +++ L S+LP S + +
Sbjct: 1105 RDGENYVVLLDSTLPRSQYDY 1125
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May antagonize Nodal signaling. Homo sapiens (taxid: 9606) |
| >sp|Q5JPE7|NOMO2_HUMAN Nodal modulator 2 OS=Homo sapiens GN=NOMO2 PE=1 SV=1 | Back alignment and function description |
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| >sp|P69849|NOMO3_HUMAN Nodal modulator 3 OS=Homo sapiens GN=NOMO3 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q6GQT9|NOMO1_MOUSE Nodal modulator 1 OS=Mus musculus GN=Nomo1 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q54CU4|COLA_DICDI Colossin-A OS=Dictyostelium discoideum GN=colA PE=3 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1150 | ||||||
| 255548409 | 1198 | carboxypeptidase regulatory region-conta | 0.997 | 0.957 | 0.721 | 0.0 | |
| 225437598 | 1199 | PREDICTED: nodal modulator 1 [Vitis vini | 0.998 | 0.957 | 0.726 | 0.0 | |
| 356572803 | 1195 | PREDICTED: nodal modulator 1-like [Glyci | 0.988 | 0.951 | 0.671 | 0.0 | |
| 449436411 | 1199 | PREDICTED: nodal modulator 2-like [Cucum | 0.996 | 0.955 | 0.658 | 0.0 | |
| 356503940 | 1195 | PREDICTED: nodal modulator 1-like [Glyci | 0.988 | 0.951 | 0.669 | 0.0 | |
| 297821142 | 1225 | hypothetical protein ARALYDRAFT_486740 [ | 0.986 | 0.926 | 0.630 | 0.0 | |
| 15228737 | 1227 | carbohydrate-binding-like fold-containin | 0.986 | 0.925 | 0.627 | 0.0 | |
| 357511397 | 1288 | Nodal modulator [Medicago truncatula] gi | 0.883 | 0.788 | 0.680 | 0.0 | |
| 357128074 | 1203 | PREDICTED: nodal modulator 1-like [Brach | 0.978 | 0.935 | 0.555 | 0.0 | |
| 125525541 | 1193 | hypothetical protein OsI_01543 [Oryza sa | 0.964 | 0.929 | 0.582 | 0.0 |
| >gi|255548409|ref|XP_002515261.1| carboxypeptidase regulatory region-containingprotein, putative [Ricinus communis] gi|223545741|gb|EEF47245.1| carboxypeptidase regulatory region-containingprotein, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 1776 bits (4600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 867/1201 (72%), Positives = 989/1201 (82%), Gaps = 54/1201 (4%)
Query: 1 MKSRDTLTYLLIIIYSIAAVSADSIHGCGGFVE--------------------------- 33
MK RD L Y I++YS + SADSIHGCGGFVE
Sbjct: 1 MKIRDALLYFSILLYSFSFASADSIHGCGGFVEASSSLIKSRKSTDTKLDYSDITVELRT 60
Query: 34 ------------------------GSFVIKVNGPEGWSWNPDKVAVTVDDTGCNGNEDIN 69
GSFVIK++GPEGWSW+P+ V V VDDTGCN NEDIN
Sbjct: 61 VDGLVKERTQCAPNGYYFIPVYDKGSFVIKISGPEGWSWDPESVPVIVDDTGCNHNEDIN 120
Query: 70 FRFTGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSEGSYLFKNII 129
FRFTGFTL GRV+GA+GGESCL K GGPSNVNVELLS S D ISSV+TS+ GSY F NII
Sbjct: 121 FRFTGFTLSGRVMGAVGGESCLVKSGGPSNVNVELLSPSDDFISSVLTSATGSYSFNNII 180
Query: 130 PGKYKLRASHPNLSVEVRGSTEVELGFENGEVDDIFFAPGYEIRGLVVAQGNPILGVHIY 189
PGKYK+RASHP+L VEV+GSTEV LGFENG VDDIFF PGY++ G VVAQGNPILGVHI+
Sbjct: 181 PGKYKIRASHPDLKVEVKGSTEVHLGFENGIVDDIFFVPGYDLHGYVVAQGNPILGVHIF 240
Query: 190 LYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFD 249
LYS+DV ++DCPQGSG+A G+R LCHA+SDADG F FKS+PCG+YELVP+YKGENT+FD
Sbjct: 241 LYSEDVVELDCPQGSGDATGQRNPLCHAISDADGMFSFKSLPCGRYELVPYYKGENTLFD 300
Query: 250 VSPSLVSMSVRHQHVTVPEKFQVTGFSVGGRVVDENDMGVEGVKILVDGHERSITDRDGY 309
VSP LVS+SV HQHVTVP+KFQVTGFSVGGRV D NDMGVEGVKI+VDGHERS+TD++GY
Sbjct: 301 VSPPLVSVSVEHQHVTVPQKFQVTGFSVGGRVADGNDMGVEGVKIIVDGHERSMTDKEGY 360
Query: 310 YKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAISYDICGVVRTVGSGNKV 369
YKLDQVTSN YTIEA K HY+FN LKEYMVLPNMAS+ADIKAISYD+CGVVR V SG K
Sbjct: 361 YKLDQVTSNHYTIEARKEHYRFNSLKEYMVLPNMASVADIKAISYDVCGVVRMVNSGYKA 420
Query: 370 KVALTHGPDKVKPQVKQTDNNGNFCFEVPPGEYRLSAMAATPESSSGILFLPPYADVVVK 429
KV LTHGP+ VKPQ +QTD +G FCFEV PGEYRLSA AATPES+ G+LFLPPY D+VVK
Sbjct: 421 KVTLTHGPENVKPQARQTDGDGKFCFEVAPGEYRLSAFAATPESAPGLLFLPPYVDLVVK 480
Query: 430 SPLLNIEFSQALVNVLGNVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLF 489
SPL+N+EFSQALVNVLG+V CKE+CGP V+VTLMRLG K + E+K+++LTD+SD+FLF
Sbjct: 481 SPLMNVEFSQALVNVLGSVTCKEKCGPSVSVTLMRLGGKRNE--ERKSITLTDESDEFLF 538
Query: 490 RDVLPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTH 549
+VLPGKYR+EVK +S A+ +DNWCWEQSFI V VG DVKG FVQKGYW+NV+STH
Sbjct: 539 ANVLPGKYRIEVKHSSHGATPDKDNWCWEQSFIDVVVGAEDVKGNLFVQKGYWVNVVSTH 598
Query: 550 DVDAYMTQQDGSHVPLKVKKGSQHICVESPGVHNLHFVNPCVFFGSPVLKMDTSNPSPIY 609
D+DAY+TQ D S + LK+KKGSQHICVESPGVH LHF+N C+ F S +K+DTSNPSP+Y
Sbjct: 599 DIDAYLTQPDHSIINLKIKKGSQHICVESPGVHELHFINSCILFASSPMKIDTSNPSPVY 658
Query: 610 LKGEKYQLRGHINVQSRSPIGVHELPENIIVDILNGDGSISNRTTATLTSPANDQTSYAV 669
L+GEKY L+G I V+ S G++E P N +VDILNGD S+ + +A L S A+D TS +
Sbjct: 659 LRGEKYLLKGQIKVELSSADGLYEPPNNFVVDILNGDSSVIDGASANLASGASDHTSTGI 718
Query: 670 YGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTE 729
Y +S+WANLG++LTFVPRD R N EK+ILFYP++ V V NDGCQA IP FSGR GLY E
Sbjct: 719 YEYSIWANLGEKLTFVPRDSRVNGEKRILFYPKEHNVLVANDGCQASIPVFSGRPGLYIE 778
Query: 730 GSVSPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKP 789
GSVSPPLSGV I+I AAEDS + LKK LALET TG DGSF+GGPLYDDI+Y+VEASKP
Sbjct: 779 GSVSPPLSGVYIKISAAEDSHVTLLKKDDLALETVTGMDGSFVGGPLYDDISYSVEASKP 838
Query: 790 GYYLRQVGPNSFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFH 849
GY+L+++GP+SFSCQKL QIS+ IYSKDDA EPIPSVLLSLSGDDGYRNNSVS AGG+F
Sbjct: 839 GYHLKRMGPHSFSCQKLGQISIHIYSKDDANEPIPSVLLSLSGDDGYRNNSVSGAGGTFL 898
Query: 850 FDNLFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPK 909
FDNLFPG FYLRPLLKEYAFSPPAQAIELGSG++REV F+ATRVAYSATG ITLLSGQPK
Sbjct: 899 FDNLFPGTFYLRPLLKEYAFSPPAQAIELGSGDTREVTFEATRVAYSATGMITLLSGQPK 958
Query: 910 DGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESV 969
+GVSVEARSESKGYYEETVTD+SG+YRLRGL PDTTYVIKVV+K G GS ERASPES
Sbjct: 959 EGVSVEARSESKGYYEETVTDSSGNYRLRGLVPDTTYVIKVVEKHGLGSA-FERASPESY 1017
Query: 970 TVKVGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISL 1029
TVKVG GDIK LDF+VFEQ E TILS +VEG R +E +SHLLVEIKSASDTSK+ESV L
Sbjct: 1018 TVKVGHGDIKALDFVVFEQLEMTILSCNVEGKRTEEFHSHLLVEIKSASDTSKIESVFPL 1077
Query: 1030 PMSNFFQVKDLPKGKHLLQLRSSLPSSTHRFESEIIEVDLEKNAQIHVGPLRYSVEENHH 1089
P+SNFFQVK+LPKGKHLLQLRSSL SST +FES+IIEVDLEK AQIHVGPLRY+ EE+H
Sbjct: 1078 PLSNFFQVKNLPKGKHLLQLRSSLQSSTLKFESDIIEVDLEKTAQIHVGPLRYNFEEDHQ 1137
Query: 1090 KQDLTPAPVFPLIVGVSVIGLFISMPRLKDLYQAAMGIPTPGFIATAKKEARKPVVRKKT 1149
KQ+LT APV PL+VGVSVI LFISMPRLKDLYQ+ GIPTPGF+ TAKKE RKPVVRKKT
Sbjct: 1138 KQELTVAPVLPLVVGVSVIALFISMPRLKDLYQSTTGIPTPGFVTTAKKETRKPVVRKKT 1197
Query: 1150 Y 1150
Y
Sbjct: 1198 Y 1198
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225437598|ref|XP_002271147.1| PREDICTED: nodal modulator 1 [Vitis vinifera] gi|297743995|emb|CBI36965.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|356572803|ref|XP_003554555.1| PREDICTED: nodal modulator 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|449436411|ref|XP_004135986.1| PREDICTED: nodal modulator 2-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356503940|ref|XP_003520757.1| PREDICTED: nodal modulator 1-like [Glycine max] | Back alignment and taxonomy information |
|---|
| >gi|297821142|ref|XP_002878454.1| hypothetical protein ARALYDRAFT_486740 [Arabidopsis lyrata subsp. lyrata] gi|297324292|gb|EFH54713.1| hypothetical protein ARALYDRAFT_486740 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
| >gi|15228737|ref|NP_191795.1| carbohydrate-binding-like fold-containing protein [Arabidopsis thaliana] gi|7340707|emb|CAB82950.1| putative protein [Arabidopsis thaliana] gi|332646822|gb|AEE80343.1| carbohydrate-binding-like fold-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
| >gi|357511397|ref|XP_003625987.1| Nodal modulator [Medicago truncatula] gi|355501002|gb|AES82205.1| Nodal modulator [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|357128074|ref|XP_003565701.1| PREDICTED: nodal modulator 1-like [Brachypodium distachyon] | Back alignment and taxonomy information |
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| >gi|125525541|gb|EAY73655.1| hypothetical protein OsI_01543 [Oryza sativa Indica Group] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1150 | ||||||
| TAIR|locus:2096049 | 1227 | AT3G62360 [Arabidopsis thalian | 0.718 | 0.673 | 0.644 | 0.0 | |
| RGD|1305240 | 1214 | Nomo1 "nodal modulator 1" [Rat | 0.489 | 0.463 | 0.333 | 1.5e-130 | |
| MGI|MGI:2385850 | 1214 | Nomo1 "nodal modulator 1" [Mus | 0.489 | 0.463 | 0.327 | 3.9e-128 | |
| ZFIN|ZDB-GENE-040826-3 | 1217 | nomo "nodal modulator" [Danio | 0.926 | 0.875 | 0.304 | 5.6e-126 | |
| UNIPROTKB|F1NZW1 | 1215 | PM5 "Uncharacterized protein" | 0.928 | 0.879 | 0.290 | 1.8e-116 | |
| UNIPROTKB|F1MF76 | 1222 | NOMO2 "Uncharacterized protein | 0.779 | 0.733 | 0.301 | 7.3e-105 | |
| UNIPROTKB|Q5JPE7 | 1267 | NOMO2 "Nodal modulator 2" [Hom | 0.778 | 0.706 | 0.301 | 1.2e-100 | |
| UNIPROTKB|J3KN36 | 1267 | NOMO3 "Nodal modulator 3" [Hom | 0.778 | 0.706 | 0.301 | 1.6e-100 | |
| UNIPROTKB|P69849 | 1222 | NOMO3 "Nodal modulator 3" [Hom | 0.778 | 0.732 | 0.301 | 1.6e-100 | |
| UNIPROTKB|Q15155 | 1222 | NOMO1 "Nodal modulator 1" [Hom | 0.778 | 0.732 | 0.300 | 2e-100 |
| TAIR|locus:2096049 AT3G62360 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2812 (994.9 bits), Expect = 0., Sum P(3) = 0.
Identities = 540/838 (64%), Positives = 664/838 (79%)
Query: 314 QVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAISYDICGVVRTVGSGNKVKVAL 373
+VTSN+YTI+AVK HYKF+KLK++MVLPNMAS+ DI A+SYDICGVVR GS +K KVAL
Sbjct: 401 KVTSNQYTIDAVKEHYKFDKLKKFMVLPNMASLPDINAVSYDICGVVRMFGSRHKAKVAL 460
Query: 374 THGPDKVKPQVKQTDNNGNFCFEVPPGEYRLSAMAATPESSSGILFLPPYADVVVKSPLL 433
THGP VKPQ+K TD G FCFEVPPGEYRLSA+AATP+ +S +LFLP Y DV VKSPLL
Sbjct: 461 THGPTNVKPQMKLTDETGAFCFEVPPGEYRLSALAATPKGASELLFLPAYVDVAVKSPLL 520
Query: 434 NIEFSQALVNVLGNVACKERCGPLVTVTLM-RLGQKHYDGTEKKTVSLTDDSDQFLFRDV 492
NIEFSQA VNV G+V CKE+CGP V+V L+ G + +KKTV LTD+S QFLF D+
Sbjct: 521 NIEFSQARVNVHGSVTCKEKCGPSVSVVLVGAAGDR-----DKKTVVLTDESSQFLFSDI 575
Query: 493 LPGKYRLEVKRTSREASSMEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVD 552
LPGKYR+EVK S EA+S ED+WCW++S I V+VGT D+KG+EFVQKGYW+N+ISTH+VD
Sbjct: 576 LPGKYRVEVKSISPEAASDEDSWCWDRSSIDVNVGTEDIKGIEFVQKGYWINIISTHEVD 635
Query: 553 AYMTQQDGSHVPLKVKKGSQHICVESPGVHNLHFVNPCVFFGSPVLKMDTSNPSPIYLKG 612
A + DGS LK+KKGSQ IC+ESPG H L + C+ FGS +K+D SNP PI+LK
Sbjct: 636 ARIAHPDGSPTSLKIKKGSQKICIESPGGHELQLSDSCMSFGSNSIKIDVSNPQPIHLKA 695
Query: 613 EKYQLRGHINVQSRSPIGVHELPENIIVDILNGDGSISNRTTATLTSPANDQTSYAVYGF 672
EKY L+G INV+S S I EL EN IVDI + G++ N A L S + VY +
Sbjct: 696 EKYLLKGLINVESSSTIE-SELQENFIVDIQDKKGNVINTIAAKLASDGS-----GVYEY 749
Query: 673 SLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTEGSV 732
WA+LG++++FVP+D RGN EKK+LFYP++ V+ DGCQA + F+GRLGLY +GSV
Sbjct: 750 YTWASLGEKISFVPQDSRGNVEKKMLFYPKEIHAVVSKDGCQASVSPFTGRLGLYIQGSV 809
Query: 733 SPPLSGVNIRIIAAEDSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKPGYY 792
SPPL GVNI+I AA+DS I+SLKKG +A+ETST + GSF+ GPLYDDI Y EASKPGY+
Sbjct: 810 SPPLPGVNIKIFAAKDSLISSLKKGEIAIETSTLSAGSFVAGPLYDDIPYATEASKPGYH 869
Query: 793 LRQVGPNSFSCQKLSQISVRIYSKDDAGEPIPSVLLSLSGDDGYRNNSVSWAGGSFHFDN 852
++++GP SFSCQKL QISVR+ SKD+A IP +LLSLSGD GYRNNS+S AGG F FD+
Sbjct: 870 IKRLGPYSFSCQKLGQISVRVNSKDNAETSIPPLLLSLSGDHGYRNNSISGAGGLFVFDS 929
Query: 853 LFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLSGQPKDGV 912
LFPGNFYLRPLLKEY+F P AIEL SGES E +F+ATRVAYSA G + LLSGQP++GV
Sbjct: 930 LFPGNFYLRPLLKEYSFKPSTLAIELNSGESSEAVFEATRVAYSAMGRVALLSGQPQEGV 989
Query: 913 SVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVK 972
++EARS+SKGYYEET +D +G+YRLRGLHPDT YVIKV KK G + +IERASPESV+++
Sbjct: 990 AIEARSDSKGYYEETTSDINGNYRLRGLHPDTAYVIKVSKKIGSANNQIERASPESVSLQ 1049
Query: 973 VGSGDIKGLDFLVFEQPEKTILSGHVEGNRIKELNSHLLVEIKSASDTSKVESVISLPMS 1032
+G DI GLDFLVFEQPE TIL+ HVEG + ++LNS+LLVEIKSA D SK+E+V LP+S
Sbjct: 1050 IGYEDINGLDFLVFEQPETTILTCHVEGKQNEDLNSNLLVEIKSAIDKSKIENVFPLPLS 1109
Query: 1033 NFFQVKDLPKGKHLLQLRSSLPSSTHRFESEIIEVDLEKNAQIHVGPLRYSVEENHHKQD 1092
NFFQVK LPKGKHL+QL+SS P +H+ ESEIIEVD E NAQIH+GPLRYS+ +H Q+
Sbjct: 1110 NFFQVKGLPKGKHLVQLKSSRPLISHKVESEIIEVDFETNAQIHIGPLRYSIVADHQSQE 1169
Query: 1093 LTPAPVFPLIVGVSVIGLFISMPRLKDLYQAAMGIPTPGFIATAKKEARKPVVRKKTY 1150
+TPA + PL++GVS I LF+S+PRLKD+YQA +GI +PGF +AK+E RK V RKKT+
Sbjct: 1170 VTPAAILPLVIGVSAIALFLSIPRLKDIYQATVGISSPGFTTSAKREPRKAVARKKTF 1227
|
|
| RGD|1305240 Nomo1 "nodal modulator 1" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:2385850 Nomo1 "nodal modulator 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| ZFIN|ZDB-GENE-040826-3 nomo "nodal modulator" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1NZW1 PM5 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MF76 NOMO2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q5JPE7 NOMO2 "Nodal modulator 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J3KN36 NOMO3 "Nodal modulator 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P69849 NOMO3 "Nodal modulator 3" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q15155 NOMO1 "Nodal modulator 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q6GQT9 | NOMO1_MOUSE | No assigned EC number | 0.3083 | 0.8486 | 0.8039 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1150 | |||
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 2e-08 | |
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 8e-07 | |
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 1e-05 | |
| pfam13620 | 81 | pfam13620, CarboxypepD_reg, Carboxypeptidase regul | 4e-04 |
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
Score = 51.9 bits (125), Expect = 2e-08
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 9/86 (10%)
Query: 898 TGTITLLSGQPKDGVSVEARSESKGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFG 957
+GT+T SG P G +V + G T TD G + L GL P T + V G+
Sbjct: 3 SGTVTDASGAPIPGATVTLTNADTGTVRGTTTDADGRFSLTGLPPGTYTL--TVSAPGYK 60
Query: 958 STKIERASPESVTVKVGSGDIKGLDF 983
S ++ V V +G LD
Sbjct: 61 SQTVK-------DVTVTAGQTTTLDI 79
|
Length = 81 |
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
| >gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1150 | |||
| KOG1948 | 1165 | consensus Metalloproteinase-related collagenase pM | 100.0 | |
| KOG1948 | 1165 | consensus Metalloproteinase-related collagenase pM | 100.0 | |
| COG4932 | 1531 | Predicted outer membrane protein [Cell envelope bi | 99.96 | |
| COG4932 | 1531 | Predicted outer membrane protein [Cell envelope bi | 99.95 | |
| PF13620 | 82 | CarboxypepD_reg: Carboxypeptidase regulatory-like | 98.89 | |
| PF13620 | 82 | CarboxypepD_reg: Carboxypeptidase regulatory-like | 98.82 | |
| PF13715 | 88 | DUF4480: Domain of unknown function (DUF4480) | 98.2 | |
| PF05738 | 70 | Cna_B: Cna protein B-type domain; InterPro: IPR008 | 98.13 | |
| PF13715 | 88 | DUF4480: Domain of unknown function (DUF4480) | 98.08 | |
| cd03863 | 375 | M14_CPD_II The second carboxypeptidase (CP)-like d | 97.96 | |
| PF05738 | 70 | Cna_B: Cna protein B-type domain; InterPro: IPR008 | 97.82 | |
| cd06245 | 363 | M14_CPD_III The third carboxypeptidase (CP)-like d | 97.79 | |
| PF07210 | 85 | DUF1416: Protein of unknown function (DUF1416); In | 97.78 | |
| cd03865 | 402 | M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C | 97.77 | |
| cd03864 | 392 | M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als | 97.74 | |
| cd03868 | 372 | M14_CPD_I The first carboxypeptidase (CP)-like dom | 97.58 | |
| cd03863 | 375 | M14_CPD_II The second carboxypeptidase (CP)-like d | 97.53 | |
| PF07210 | 85 | DUF1416: Protein of unknown function (DUF1416); In | 97.5 | |
| PF08400 | 134 | phage_tail_N: Prophage tail fibre N-terminal; Inte | 97.42 | |
| PRK15036 | 137 | hydroxyisourate hydrolase; Provisional | 97.42 | |
| cd03866 | 376 | M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM | 97.42 | |
| cd03858 | 374 | M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub | 97.4 | |
| PF08400 | 134 | phage_tail_N: Prophage tail fibre N-terminal; Inte | 97.35 | |
| cd03867 | 395 | M14_CPZ Peptidase M14-like domain of carboxypeptid | 97.29 | |
| cd03864 | 392 | M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als | 97.15 | |
| cd03869 | 405 | M14_CPX_like Peptidase M14-like domain of carboxyp | 97.06 | |
| cd06245 | 363 | M14_CPD_III The third carboxypeptidase (CP)-like d | 97.05 | |
| cd03865 | 402 | M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C | 97.01 | |
| cd03866 | 376 | M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM | 96.93 | |
| PRK15036 | 137 | hydroxyisourate hydrolase; Provisional | 96.9 | |
| KOG2649 | 500 | consensus Zinc carboxypeptidase [General function | 96.69 | |
| TIGR02962 | 112 | hdxy_isourate hydroxyisourate hydrolase. Members o | 96.59 | |
| PF14686 | 95 | fn3_3: Polysaccharide lyase family 4, domain II; P | 96.53 | |
| PF14686 | 95 | fn3_3: Polysaccharide lyase family 4, domain II; P | 96.4 | |
| cd00421 | 146 | intradiol_dioxygenase Intradiol dioxygenases catal | 96.35 | |
| cd03868 | 372 | M14_CPD_I The first carboxypeptidase (CP)-like dom | 96.21 | |
| cd03858 | 374 | M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub | 96.04 | |
| COG3485 | 226 | PcaH Protocatechuate 3,4-dioxygenase beta subunit | 95.81 | |
| PF11974 | 97 | MG1: Alpha-2-macroglobulin MG1 domain; InterPro: I | 95.81 | |
| cd03867 | 395 | M14_CPZ Peptidase M14-like domain of carboxypeptid | 95.74 | |
| cd05822 | 112 | TLP_HIUase HIUase (5-hydroxyisourate hydrolase) ca | 95.59 | |
| PF00775 | 183 | Dioxygenase_C: Dioxygenase; InterPro: IPR000627 Th | 95.46 | |
| TIGR02962 | 112 | hdxy_isourate hydroxyisourate hydrolase. Members o | 95.4 | |
| PF00775 | 183 | Dioxygenase_C: Dioxygenase; InterPro: IPR000627 Th | 95.32 | |
| cd03464 | 220 | 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4- | 95.32 | |
| PF09430 | 123 | DUF2012: Protein of unknown function (DUF2012); In | 95.22 | |
| cd03459 | 158 | 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) | 95.17 | |
| cd05821 | 121 | TLP_Transthyretin Transthyretin (TTR) is a 55 kDa | 95.07 | |
| cd05469 | 113 | Transthyretin_like Transthyretin_like. This domain | 95.0 | |
| TIGR02465 | 246 | chlorocat_1_2 chlorocatechol 1,2-dioxygenase. Memb | 94.97 | |
| PF10670 | 215 | DUF4198: Domain of unknown function (DUF4198) | 94.92 | |
| TIGR02422 | 220 | protocat_beta protocatechuate 3,4-dioxygenase, bet | 94.89 | |
| TIGR00864 | 2740 | PCC polycystin cation channel protein. Note: this | 94.87 | |
| cd03459 | 158 | 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) | 94.85 | |
| COG2351 | 124 | Transthyretin-like protein [General function predi | 94.81 | |
| cd00421 | 146 | intradiol_dioxygenase Intradiol dioxygenases catal | 94.8 | |
| PF08308 | 71 | PEGA: PEGA domain; InterPro: IPR013229 This domain | 94.75 | |
| TIGR02438 | 281 | catachol_actin catechol 1,2-dioxygenase, Actinobac | 94.74 | |
| cd03463 | 185 | 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4 | 94.72 | |
| cd03460 | 282 | 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyz | 94.72 | |
| cd03458 | 256 | Catechol_intradiol_dioxygenases Catechol intradiol | 94.7 | |
| smart00095 | 121 | TR_THY Transthyretin. | 94.69 | |
| TIGR02465 | 246 | chlorocat_1_2 chlorocatechol 1,2-dioxygenase. Memb | 94.66 | |
| TIGR02439 | 285 | catechol_proteo catechol 1,2-dioxygenase, proteoba | 94.64 | |
| COG3485 | 226 | PcaH Protocatechuate 3,4-dioxygenase beta subunit | 94.62 | |
| cd03461 | 277 | 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) ca | 94.58 | |
| cd03462 | 247 | 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) | 94.56 | |
| PF00576 | 112 | Transthyretin: HIUase/Transthyretin family; InterP | 94.55 | |
| cd03458 | 256 | Catechol_intradiol_dioxygenases Catechol intradiol | 94.54 | |
| PF09430 | 123 | DUF2012: Protein of unknown function (DUF2012); In | 94.43 | |
| cd03463 | 185 | 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4 | 94.42 | |
| PF10670 | 215 | DUF4198: Domain of unknown function (DUF4198) | 94.42 | |
| TIGR02423 | 193 | protocat_alph protocatechuate 3,4-dioxygenase, alp | 94.41 | |
| PF11974 | 97 | MG1: Alpha-2-macroglobulin MG1 domain; InterPro: I | 94.35 | |
| cd03462 | 247 | 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) | 94.21 | |
| cd03460 | 282 | 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyz | 93.98 | |
| cd03464 | 220 | 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4- | 93.97 | |
| COG2373 | 1621 | Large extracellular alpha-helical protein [General | 93.94 | |
| KOG2649 | 500 | consensus Zinc carboxypeptidase [General function | 93.92 | |
| TIGR02438 | 281 | catachol_actin catechol 1,2-dioxygenase, Actinobac | 93.87 | |
| TIGR02439 | 285 | catechol_proteo catechol 1,2-dioxygenase, proteoba | 93.79 | |
| TIGR02422 | 220 | protocat_beta protocatechuate 3,4-dioxygenase, bet | 93.68 | |
| TIGR02423 | 193 | protocat_alph protocatechuate 3,4-dioxygenase, alp | 93.66 | |
| cd03869 | 405 | M14_CPX_like Peptidase M14-like domain of carboxyp | 93.56 | |
| KOG0518 | 1113 | consensus Actin-binding cytoskeleton protein, fila | 93.36 | |
| cd03461 | 277 | 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) ca | 93.22 | |
| KOG0518 | 1113 | consensus Actin-binding cytoskeleton protein, fila | 92.73 | |
| cd05822 | 112 | TLP_HIUase HIUase (5-hydroxyisourate hydrolase) ca | 92.26 | |
| PF00576 | 112 | Transthyretin: HIUase/Transthyretin family; InterP | 91.98 | |
| KOG3006 | 132 | consensus Transthyretin and related proteins [Lipi | 91.81 | |
| PF02369 | 100 | Big_1: Bacterial Ig-like domain (group 1); InterPr | 90.81 | |
| TIGR00864 | 2740 | PCC polycystin cation channel protein. Note: this | 90.55 | |
| cd05821 | 121 | TLP_Transthyretin Transthyretin (TTR) is a 55 kDa | 90.47 | |
| cd05469 | 113 | Transthyretin_like Transthyretin_like. This domain | 90.19 | |
| PF01060 | 80 | DUF290: Transthyretin-like family; InterPro: IPR00 | 90.04 | |
| PF02369 | 100 | Big_1: Bacterial Ig-like domain (group 1); InterPr | 90.03 | |
| smart00095 | 121 | TR_THY Transthyretin. | 89.51 | |
| cd03457 | 188 | intradiol_dioxygenase_like Intradiol dioxygenase s | 89.28 | |
| cd00222 | 187 | CollagenBindB Collagen-binding protein B domain, m | 88.88 | |
| COG2373 | 1621 | Large extracellular alpha-helical protein [General | 88.61 | |
| PF01060 | 80 | DUF290: Transthyretin-like family; InterPro: IPR00 | 88.38 | |
| PF08308 | 71 | PEGA: PEGA domain; InterPro: IPR013229 This domain | 88.09 | |
| smart00634 | 92 | BID_1 Bacterial Ig-like domain (group 1). | 88.01 | |
| COG2351 | 124 | Transthyretin-like protein [General function predi | 87.97 | |
| cd03457 | 188 | intradiol_dioxygenase_like Intradiol dioxygenase s | 87.62 | |
| COG5266 | 264 | CbiK ABC-type Co2+ transport system, periplasmic c | 87.04 | |
| COG5266 | 264 | CbiK ABC-type Co2+ transport system, periplasmic c | 85.72 | |
| PF10794 | 131 | DUF2606: Protein of unknown function (DUF2606); In | 84.89 | |
| PF07495 | 66 | Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This regi | 84.13 | |
| PRK15235 | 814 | outer membrane fimbrial usher protein SefC; Provis | 81.66 | |
| PF12866 | 222 | DUF3823: Protein of unknown function (DUF3823); In | 81.01 | |
| PF10794 | 131 | DUF2606: Protein of unknown function (DUF2606); In | 80.11 |
| >KOG1948 consensus Metalloproteinase-related collagenase pM5 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-212 Score=1817.10 Aligned_cols=1089 Identities=38% Similarity=0.654 Sum_probs=992.1
Q ss_pred cchhhhhhHhhhhhhhcccCceEeeCCeee-----------------------------------------eEEEEEEEC
Q 001120 4 RDTLTYLLIIIYSIAAVSADSIHGCGGFVE-----------------------------------------GSFVIKVNG 42 (1150)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~g~ggfv~-----------------------------------------G~Y~L~~~~ 42 (1150)
--|++.||++++..+.+++|+|+||||||| |+|.|++++
T Consensus 5 ~~~~vvlLI~ls~~a~~sed~VvgCgGfVkSd~eidyS~ievkL~Tk~G~lKd~tdcaPsNGYfmIPvYdKGdyiLkIsp 84 (1165)
T KOG1948|consen 5 CHMGVVLLILLSLLAPGSEDNVVGCGGFVKSDSEIDYSQIEVKLLTKEGHLKDETDCAPSNGYFMIPVYDKGDYILKISP 84 (1165)
T ss_pred eeehhhhhhhhhcccCCceeeEEeccceeecCCccceeeEEEEEEeeccccccccccCCCCceEEEEEecCCcEEEEecC
Confidence 347788888899999999999999999999 999999999
Q ss_pred CCCcccCCceEEEEEcC--CCcCCcceeeEEEeCceEEEEEEeecCCccccCCCCCCcceEEEEEeCCCceEEEEEeCCC
Q 001120 43 PEGWSWNPDKVAVTVDD--TGCNGNEDINFRFTGFTLLGRVVGAIGGESCLDKGGGPSNVNVELLSHSGDLISSVITSSE 120 (1150)
Q Consensus 43 P~Gw~f~p~~v~v~Vd~--~~~s~~~dinf~~~g~~IsG~V~~~~G~~s~~~~g~plaGv~V~L~~~~g~~i~~ttTd~~ 120 (1150)
|+||+|+|++++++||+ |.|++|.||||.|+||+|+|+|..+. +.+++||.|+|++..+. ++++.|+++
T Consensus 85 P~GwsfePd~Vel~vDGktd~Cs~n~DinFhftGFsv~GkVlgaa--------ggGpagV~velrs~e~~-iast~T~~~ 155 (1165)
T KOG1948|consen 85 PAGWSFEPDSVELKVDGKTDACSLNEDINFHFTGFSVRGKVLGAA--------GGGPAGVLVELRSQEDP-IASTKTEDG 155 (1165)
T ss_pred CCCccccCceEEEEeccccccccCCCceEEEEeeeeEeeEEeecc--------CCCcccceeecccccCc-ceeeEecCC
Confidence 99999999999999997 79999999999999999999999873 36899999999987654 889999999
Q ss_pred ceEEEccccCccEEEEEEcCCceEEeeccEEEEEcccceeeeeeeeecCcEEEEEEEeCCcceeceEEEEEECCCCcccC
Q 001120 121 GSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVELGFENGEVDDIFFAPGYEIRGLVVAQGNPILGVHIYLYSDDVGKVDC 200 (1150)
Q Consensus 121 G~f~f~~L~pG~Y~l~a~~~g~~~~~~~~~~V~v~~~~~~~~~~l~i~g~~i~G~V~~~G~Pl~Ga~V~L~~~~~~~~~~ 200 (1150)
|.|.|.+++||+|.|+++|+.|++..++.+.|.+...+..+++.|.+.||++.|+|+.+|.|+.|+.++|+..+.....|
T Consensus 156 Gky~f~~iiPG~Yev~ashp~w~~~~ag~tvvev~~a~~~va~~f~VsGydl~gsv~s~s~P~~gv~~~l~s~~v~~~dv 235 (1165)
T KOG1948|consen 156 GKYEFRNIIPGKYEVSASHPAWECISAGKTVVEVKNAPVVVAPNFKVSGYDLEGSVRSESMPFVGVVMTLYSTSVIDLDV 235 (1165)
T ss_pred CeEEEEecCCCceEEeccCcceeEeecCcEEEEeCCCccccCCceEEEeeeeEEEEeccCCcccceEEEEEEcccccccC
Confidence 99999999999999999999999986666778877666778899999999999999999999999999999987555444
Q ss_pred CCCCCC-cc----c-ccceeeEEEeCCCceEEECccCCeeEEEEEEEecCCeEEEecCceEEEEEeccceeeeccEEEec
Q 001120 201 PQGSGN-AL----G-ERKALCHAVSDADGKFMFKSVPCGQYELVPHYKGENTVFDVSPSLVSMSVRHQHVTVPEKFQVTG 274 (1150)
Q Consensus 201 ~~g~~~-~~----~-~g~~~~~a~TDa~G~f~f~~LppG~Y~v~~~~~~~~~~~~~~P~~~~vtV~~~~~~l~~~f~~~g 274 (1150)
.+..++ +| . ....+|.+++|++|+|.|.++|+|.|.+.+.|.+++..||++|..++++|+++++++++.|+++|
T Consensus 236 pkc~gs~ap~n~~a~e~vslc~~vsd~~G~fsfksvPsGkY~l~a~y~ge~~~fdvSP~~l~v~Vehd~lqi~~ef~vtg 315 (1165)
T KOG1948|consen 236 PKCVGSEAPLNVPATENVSLCIGVSDPRGRFSFKSVPSGKYYLAASYVGEPKSFDVSPNPLKVVVEHDHLQIASEFRVTG 315 (1165)
T ss_pred CccccCCCCCCCCcccceeeEEEEEcCCceEEEEEcCCCCEEEEEEecCCceEEEeCCCceeEEEeccceeccceeEEEE
Confidence 443322 21 1 22368999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEEEEeC-CCccccCeEEEEcceeeeEeCCCceEEECc-cCCccEEEEEEeccccccceeeEEEcCCcceeeeEEEe
Q 001120 275 FSVGGRVVDE-NDMGVEGVKILVDGHERSITDRDGYYKLDQ-VTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAI 352 (1150)
Q Consensus 275 ~sV~G~V~d~-~G~plaGA~V~l~G~~~~~TD~dG~f~l~~-L~pG~Ytv~~~~~~y~~~~~~~v~v~p~~~~i~dI~~~ 352 (1150)
|+++|||++. +|.|++||.|.+||+..+.||++|+|+|+| +..|+|+|++.+++++|++. .+++.|++++++||++.
T Consensus 316 fSvtGRVl~g~~g~~l~gvvvlvngk~~~kTdaqGyykLen~~t~gtytI~a~kehlqFstv-~~kv~pntasLpdI~a~ 394 (1165)
T KOG1948|consen 316 FSVTGRVLVGSKGLPLSGVVVLVNGKSGGKTDAQGYYKLENLKTDGTYTITAKKEHLQFSTV-HAKVKPNTASLPDITAQ 394 (1165)
T ss_pred EEeeeeEEeCCCCCCccceEEEEcCcccceEcccceEEeeeeeccCcEEEEEeccceeeeeE-EEEecCCcccccccccc
Confidence 9999999997 999999999999999999999999999999 78999999999999999999 59999999999999999
Q ss_pred eeEEEEEEEEcCCcccEEEEEEcCCCcceeeeeeeCC-CeEEEEEEcCeeEEEEEEeecCCCCCceeeeCceEEEEE-cC
Q 001120 353 SYDICGVVRTVGSGNKVKVALTHGPDKVKPQVKQTDN-NGNFCFEVPPGEYRLSAMAATPESSSGILFLPPYADVVV-KS 430 (1150)
Q Consensus 353 ~~~V~G~V~~~~~~~~a~Vtl~~g~~~~~~~~~~Td~-dG~f~f~L~pG~Y~l~~~~~~~~~~~G~~~~p~~~~V~V-~~ 430 (1150)
.|+|||+|+... .++.+.|+....+.+....+|++ ||+|||.++||.|+|+++.++++.++|++|.|..++++| +.
T Consensus 395 ~fdiCGqV~~~~--k~~nv~lt~~~s~~k~s~~~t~etdGsfCf~vppG~ytievl~~ta~~aagl~l~P~~~~veV~~~ 472 (1165)
T KOG1948|consen 395 KFDICGQVEKSE--KGVNVKLTFTRSDDKRSLEITPETDGSFCFPVPPGLYTIEVLDKTASGAAGLLLTPRLLEVEVLKN 472 (1165)
T ss_pred ceeeeeEEEEcc--ccceeEEEEccCccccccccccccCCceeEEcCCccEEEEEeccCcccccccEeeeeeeeEEeecC
Confidence 999999998654 45556665333323333344444 499999999999999999999999999999999999999 68
Q ss_pred cccceEEEEeeeEEEEEEEeccCCCCceEEEEEEeCCccccCCcceeEEEecCCCcEEEcccCCccEEEEEEeecccccc
Q 001120 431 PLLNIEFSQALVNVLGNVACKERCGPLVTVTLMRLGQKHYDGTEKKTVSLTDDSDQFLFRDVLPGKYRLEVKRTSREASS 510 (1150)
Q Consensus 431 p~~~I~F~q~~a~V~G~V~~~~~~~~~~~VtL~~~~~~~~~~~~~~~~~~Td~~G~f~f~~L~PG~Y~v~~~~~~~~~~~ 510 (1150)
|+++|.|+|++++|+|.++|++.|+ .+.|+|+..... ....+.++.+|+.+.|.|+|++||+|+++++
T Consensus 473 pv~ni~Fsqfranv~g~lsCl~tCg-~a~vtlq~la~G---q~~~~~vk~td~~~~ftF~nilPGkY~~~i~-------- 540 (1165)
T KOG1948|consen 473 PVTNIRFSQFRANVNGHLSCLGTCG-TATVTLQLLAAG---QTLVRSVKGTDESSVFTFENILPGKYSARID-------- 540 (1165)
T ss_pred cccceehhhhhhccceEEEeccCCC-ceeEEEEecccC---CcceeeEEEEeeccEEEeeccCCcceEEEec--------
Confidence 9999999999999999999999999 799999877322 2355667778999999999999999999997
Q ss_pred cCCCeeEEceEEEEEEecCcccceeEEEeeeEEEEeeccceeEEEEecCCCeee---EEEeccceeEEecCCceEEEEEe
Q 001120 511 MEDNWCWEQSFIGVDVGTNDVKGVEFVQKGYWLNVISTHDVDAYMTQQDGSHVP---LKVKKGSQHICVESPGVHNLHFV 587 (1150)
Q Consensus 511 ~~~~~c~~~~~~~v~V~~~~~~~v~F~q~Gy~~~i~ssh~~~~~~~~~~~~~~~---l~l~kG~~~~c~~~~G~Y~~~~~ 587 (1150)
|+++|||+.++++++|.++++.+++|+|+|||++|++||+++++|+|++|+..+ ++|.||.|+||+++||.|.+.+
T Consensus 541 d~~~wCwe~ss~~lnV~~~d~~aieFvqkGy~~~iisSH~a~~e~~h~dg~~en~~~lki~kgvn~iCv~kpGs~~~~~- 619 (1165)
T KOG1948|consen 541 DNGRWCWEKSSMTLNVEQSDTQAIEFVQKGYAAQIISSHPAEIEWSHADGKQENGKTLKIGKGVNSICVPKPGSYDVSL- 619 (1165)
T ss_pred cCCCceeecceEEEEeecccccccceeeccEEEEEEecCceeeEEecCCCCCCCcceEEecCcceEEEccCCccceeec-
Confidence 378999999999999999999999999999999999999999999999988665 8999999999999999999997
Q ss_pred ccceecCCCcEEEeCCCCceEEEEEEEeEEEEEEEEeecCCCcccCCCcceEEEEecCCCceeecccccccCCCCCCCCc
Q 001120 588 NPCVFFGSPVLKMDTSNPSPIYLKGEKYQLRGHINVQSRSPIGVHELPENIIVDILNGDGSISNRTTATLTSPANDQTSY 667 (1150)
Q Consensus 588 ~sc~~f~~~~~~~~t~~~~~i~l~~~~~~~~G~i~l~~~~~~~~~~~~~~i~v~~~~~~g~~i~~~~~~~~~~~~~~~~~ 667 (1150)
.+||.|+.+++++++..+.+.+++++..++.|.|.+...+... ...+++.++++++..+.+| +..++..+.| +++
T Consensus 620 ~sc~tfd~sspki~v~~~~~hh~ka~i~~~k~~i~ve~~kt~~-~s~~~k~v~e~~~~k~evi---t~~a~~~avD-~G~ 694 (1165)
T KOG1948|consen 620 GSCYTFDRSSPKITVPFDGVHHEKAVIARIKGTIDVENDKTAA-VSIREKFVVEIQDIKSEVI---TREAQVPAVD-NGR 694 (1165)
T ss_pred cceeecccCCceeecCCCcchHhHhhhhhhccceeeeeccccc-ccchhhhhhhhhhhccccc---Cccccccccc-CCc
Confidence 9999999999999999999999999999999999877654221 2456788999999999888 4444333333 279
Q ss_pred ceEEEEEeccCCCeEEEEeCCCCCCCceeeeeeceeEEEEEeCCCcccccceeeeccceEEeceecCCCCceEEEEEecc
Q 001120 668 AVYGFSLWANLGDQLTFVPRDPRGNEEKKILFYPRQRQVSVTNDGCQALIPAFSGRLGLYTEGSVSPPLSGVNIRIIAAE 747 (1150)
Q Consensus 668 ~~y~~~~~a~~g~~~~v~P~s~~~~~~~~llF~P~s~~v~v~~~~c~~~~~~f~~~~G~~i~G~v~p~l~gv~i~i~~~~ 747 (1150)
+.|+|.+||++||+|+|+|+| |.|||||+++++.|+++ |+..+.+|.+++|+||+|+|.|||+||+|+|+.++
T Consensus 695 f~yey~twas~gekl~ivPss------k~lLFyP~s~eavvS~d-C~~~a~~f~g~rGLfL~Gsi~Palega~Ikis~kk 767 (1165)
T KOG1948|consen 695 FTYEYPTWASSGEKLVIVPSS------KLLLFYPTSKEAVVSGD-CIENAVKFNGFRGLFLDGSIKPALEGAVIKISLKK 767 (1165)
T ss_pred ceEechhhcCCCceEEEeecc------ceeeecCCceEEEEecc-cchhheeecceeeEEEcceeccCCCCcEEEEEecC
Confidence 999999999999999999998 89999999999999876 99999999999999999999999999999999998
Q ss_pred chhhhhccccceeEEEEeCCCceEEeccCCCCceEEEEEeCCCeEEeeec--cceeEEeeeeeEEEEEEecCCCCCcccc
Q 001120 748 DSQIASLKKGHLALETSTGADGSFIGGPLYDDITYNVEASKPGYYLRQVG--PNSFSCQKLSQISVRIYSKDDAGEPIPS 825 (1150)
Q Consensus 748 ~~~~~~~~~~~~~~~~~Td~~G~f~~gpL~~~~~y~v~a~k~gy~l~~~~--~~~f~~~kl~~i~v~v~~~~~~~~pl~g 825 (1150)
++ ++.+++.|+++|.|++|||+++..|.++|+||||+|++++ +++|+++||++|++.+.|++ ++||+|
T Consensus 768 ds--------~~~Iev~T~~~Gafk~GPl~~dl~yd~tA~kegyvft~~~~t~~sfqa~kl~~vsv~vkdea--~q~Lpg 837 (1165)
T KOG1948|consen 768 DS--------DVVIEVITNKDGAFKIGPLKRDLDYDITATKEGYVFTPTSPTPGSFQAVKLSQVSVKVKDEA--TQPLPG 837 (1165)
T ss_pred CC--------ceeEEEEEcCCCcEEecccccccccceeeccCceEEecCCCCccceeeeeeeEEEEEEeccC--CCcCCc
Confidence 86 7899999999999999999999999999999999999987 48999999999999999986 699999
Q ss_pred eEEEEeCCCccccceeecCCceEEEeecCCcceEEeecccccccCCCceeEEecCCceEEEEEEEEeeeEeEEEeeEcCC
Q 001120 826 VLLSLSGDDGYRNNSVSWAGGSFHFDNLFPGNFYLRPLLKEYAFSPPAQAIELGSGESREVIFQATRVAYSATGTITLLS 905 (1150)
Q Consensus 826 vllslsg~~~~r~n~~t~~~G~~~f~~L~PG~Y~~~~~~key~~~p~~~~i~v~~g~~~~v~~~~~r~~~s~~G~v~~~~ 905 (1150)
|||||||+++||+|++|+++|.+.|++|+||+||||||||||+|+|+++||+|+|||+.++.|+|+|+||||||+|.+||
T Consensus 838 vLLSLsGg~~yRsNlvtgdng~~nf~sLsPgqyylRpmlKEykFePst~mIevkeGq~~~vvl~gkRvAySayGtvssLs 917 (1165)
T KOG1948|consen 838 VLLSLSGGKDYRSNLVTGDNGHKNFVSLSPGQYYLRPMLKEYKFEPSTSMIEVKEGQHENVVLKGKRVAYSAYGTVSSLS 917 (1165)
T ss_pred EEEEEecCcchhhccccCCCceeEEeecCcchhhhhhHHHhcCcCCCceeEEeccCceEEEEEEEEEEEEEeeeehhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCcEEEEEeCC-CceeEEEeeCCCceEEecCCCCCcEEEEEEEEecCCCCcceeccCCceEEEEecCccceeceEE
Q 001120 906 GQPKDGVSVEARSES-KGYYEETVTDTSGSYRLRGLHPDTTYVIKVVKKDGFGSTKIERASPESVTVKVGSGDIKGLDFL 984 (1150)
Q Consensus 906 g~p~~gv~v~~~~~~-~~~~~~~~Td~~G~~~i~gL~Pg~~y~i~~~~~~~~~~~~i~~~~p~~~~v~v~~~d~~~~~f~ 984 (1150)
|+|++||.+||++++ ..++||+|||+||+||||||+|||.|.|++++.. ++++|||++|++++|+|+++||+|+||+
T Consensus 918 Gdp~~gVaieA~sdn~~~y~eeattdenG~yRiRGL~Pdc~Y~V~vk~~~--~n~~iers~P~s~tv~vgneDv~glnf~ 995 (1165)
T KOG1948|consen 918 GDPMKGVAIEALSDNCDLYQEEATTDENGTYRIRGLLPDCEYQVHVKSYA--DNSPIERSFPRSFTVSVGNEDVKGLNFM 995 (1165)
T ss_pred CCcccCeEEEEecCCCCccccccccccCCcEEEeccCCCceEEEEEeecc--CCCcccccCCceEEEEecccccCCceEE
Confidence 999999999999998 7799999999999999999999999999999875 4899999999999999999999999999
Q ss_pred EEecCCcEEEEEEEEeccccccccceEEEE-EecCCCCceEEEEeeCCceeEEeecCCCC--cEEEEEEecCCCcceeee
Q 001120 985 VFEQPEKTILSGHVEGNRIKELNSHLLVEI-KSASDTSKVESVISLPMSNFFQVKDLPKG--KHLLQLRSSLPSSTHRFE 1061 (1150)
Q Consensus 985 ~~~~~~~~~i~g~V~~~~~~~~~~~l~v~l-~~~~~~~~v~~~~~~~~~~~f~~~~l~~~--~y~v~l~s~l~~~~~~~~ 1061 (1150)
+|++++++||+|+|.++. .|++++++|.| |+.+++++|++ +..++ .+++||+||++ +|+|+|+|+||.++|+|+
T Consensus 996 af~q~kttdit~~V~~~~-ne~l~sl~vv~yKs~nddspv~s-v~~gq-l~~ffp~l~~dg~~yvV~l~Stlp~~~y~yk 1072 (1165)
T KOG1948|consen 996 AFIQAKTTDITVEVGMDT-NEELQSLRVVIYKSNNDDSPVAS-VVAGQ-LLHFFPNLPRDGVEYVVRLESTLPPQAYAYK 1072 (1165)
T ss_pred EEeccceEEEEEEEcccc-cccccceEEEEEecCCCCCcceE-Eeccc-eeeeccccCCCCceEEEEEeccCCchheeee
Confidence 999999999999999986 57778888877 99999999999 55555 78888889886 799999999999999994
Q ss_pred eeeEEEEEEecc-eEEEEEeEEeeeeccccccCCCCCchHhHHHHHHHHHH---------HhhHHHHHHHHhccCCCCCC
Q 001120 1062 SEIIEVDLEKNA-QIHVGPLRYSVEENHHKQDLTPAPVFPLIVGVSVIGLF---------ISMPRLKDLYQAAMGIPTPG 1131 (1150)
Q Consensus 1062 ~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~ 1131 (1150)
++ .|.|.. ++|+ .|.|.|++|..|+|++|++++||+|+++|+++| +++|+++|++++..+.++.+
T Consensus 1073 --lp--~fva~~~~k~a-~l~f~p~rra~eaDi~q~s~~al~l~~lvalaffnqd~~~~lLsi~s~ld~vrat~a~~sdn 1147 (1165)
T KOG1948|consen 1073 --LP--RFVADQAMKVA-RLPFTPSRRANEADISQGSFLALPLFVLVALAFFNQDRVLELLSIPSFLDWVRATFAPTSDN 1147 (1165)
T ss_pred --cc--EEEeecceEEE-EEEeCccccccccccccCcEehhHHHHHHHHHHhchhhhhhhhcchhHHHHHHhhccccCCC
Confidence 55 888877 8888 899999999999999999999999999999987 47888999999999999999
Q ss_pred CccccccccCCccccccc
Q 001120 1132 FIATAKKEARKPVVRKKT 1149 (1150)
Q Consensus 1132 ~~~~~~~~~~~~~~~~~~ 1149 (1150)
.+-..||||||...||||
T Consensus 1148 ~t~~rk~ep~k~~~~~kt 1165 (1165)
T KOG1948|consen 1148 HTRKRKREPRKAVARKKT 1165 (1165)
T ss_pred CChhhhcchhhhhhhccC
Confidence 988889999999999986
|
|
| >KOG1948 consensus Metalloproteinase-related collagenase pM5 [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >COG4932 Predicted outer membrane protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >COG4932 Predicted outer membrane protein [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A | Back alignment and domain information |
|---|
| >PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A | Back alignment and domain information |
|---|
| >PF13715 DUF4480: Domain of unknown function (DUF4480) | Back alignment and domain information |
|---|
| >PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains | Back alignment and domain information |
|---|
| >PF13715 DUF4480: Domain of unknown function (DUF4480) | Back alignment and domain information |
|---|
| >cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains | Back alignment and domain information |
|---|
| >cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length | Back alignment and domain information |
|---|
| >cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3 | Back alignment and domain information |
|---|
| >cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3 | Back alignment and domain information |
|---|
| >cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length | Back alignment and domain information |
|---|
| >PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein | Back alignment and domain information |
|---|
| >PRK15036 hydroxyisourate hydrolase; Provisional | Back alignment and domain information |
|---|
| >cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein | Back alignment and domain information |
|---|
| >cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3 | Back alignment and domain information |
|---|
| >cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3 | Back alignment and domain information |
|---|
| >cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >PRK15036 hydroxyisourate hydrolase; Provisional | Back alignment and domain information |
|---|
| >KOG2649 consensus Zinc carboxypeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02962 hdxy_isourate hydroxyisourate hydrolase | Back alignment and domain information |
|---|
| >PF14686 fn3_3: Polysaccharide lyase family 4, domain II; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A | Back alignment and domain information |
|---|
| >PF14686 fn3_3: Polysaccharide lyase family 4, domain II; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A | Back alignment and domain information |
|---|
| >cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates | Back alignment and domain information |
|---|
| >cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3 | Back alignment and domain information |
|---|
| >cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [] | Back alignment and domain information |
|---|
| >cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >cd05822 TLP_HIUase HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) | Back alignment and domain information |
|---|
| >PF00775 Dioxygenase_C: Dioxygenase; InterPro: IPR000627 This entry represents the C-terminal domain common to several intradiol ring-cleavage dioxygenases | Back alignment and domain information |
|---|
| >TIGR02962 hdxy_isourate hydroxyisourate hydrolase | Back alignment and domain information |
|---|
| >PF00775 Dioxygenase_C: Dioxygenase; InterPro: IPR000627 This entry represents the C-terminal domain common to several intradiol ring-cleavage dioxygenases | Back alignment and domain information |
|---|
| >cd03464 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit | Back alignment and domain information |
|---|
| >PF09430 DUF2012: Protein of unknown function (DUF2012); InterPro: IPR019008 This domain is found in different proteins, including uncharacterised protein family UPF0480 and nodal modulators | Back alignment and domain information |
|---|
| >cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate | Back alignment and domain information |
|---|
| >cd05821 TLP_Transthyretin Transthyretin (TTR) is a 55 kDa protein responsible for the transport of thyroid hormones and retinol in vertebrates | Back alignment and domain information |
|---|
| >cd05469 Transthyretin_like Transthyretin_like | Back alignment and domain information |
|---|
| >TIGR02465 chlorocat_1_2 chlorocatechol 1,2-dioxygenase | Back alignment and domain information |
|---|
| >PF10670 DUF4198: Domain of unknown function (DUF4198) | Back alignment and domain information |
|---|
| >TIGR02422 protocat_beta protocatechuate 3,4-dioxygenase, beta subunit | Back alignment and domain information |
|---|
| >TIGR00864 PCC polycystin cation channel protein | Back alignment and domain information |
|---|
| >cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate | Back alignment and domain information |
|---|
| >COG2351 Transthyretin-like protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates | Back alignment and domain information |
|---|
| >PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins | Back alignment and domain information |
|---|
| >TIGR02438 catachol_actin catechol 1,2-dioxygenase, Actinobacterial | Back alignment and domain information |
|---|
| >cd03463 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit | Back alignment and domain information |
|---|
| >cd03460 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate | Back alignment and domain information |
|---|
| >cd03458 Catechol_intradiol_dioxygenases Catechol intradiol dioxygenases can be divided into several subgroups according to their substrate specificity for catechol, chlorocatechols and hydroxyquinols | Back alignment and domain information |
|---|
| >smart00095 TR_THY Transthyretin | Back alignment and domain information |
|---|
| >TIGR02465 chlorocat_1_2 chlorocatechol 1,2-dioxygenase | Back alignment and domain information |
|---|
| >TIGR02439 catechol_proteo catechol 1,2-dioxygenase, proteobacterial | Back alignment and domain information |
|---|
| >COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
| >cd03461 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) catalyzes the ring cleavage of hydroxyquinol (1,2,4-trihydroxybenzene), a intermediate in the degradation of a large variety of aromatic compounds including some polychloro- and nitroaromatic pollutants, to form 3-hydroxy-cis,cis-muconates | Back alignment and domain information |
|---|
| >cd03462 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) (type II enzymes) are homodimeric intradiol dioxygenases that degrade chlorocatechols via the addition of molecular oxygen and the subsequent cleavage between two adjacent hydroxyl groups | Back alignment and domain information |
|---|
| >PF00576 Transthyretin: HIUase/Transthyretin family; InterPro: IPR023416 This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain | Back alignment and domain information |
|---|
| >cd03458 Catechol_intradiol_dioxygenases Catechol intradiol dioxygenases can be divided into several subgroups according to their substrate specificity for catechol, chlorocatechols and hydroxyquinols | Back alignment and domain information |
|---|
| >PF09430 DUF2012: Protein of unknown function (DUF2012); InterPro: IPR019008 This domain is found in different proteins, including uncharacterised protein family UPF0480 and nodal modulators | Back alignment and domain information |
|---|
| >cd03463 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit | Back alignment and domain information |
|---|
| >PF10670 DUF4198: Domain of unknown function (DUF4198) | Back alignment and domain information |
|---|
| >TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit | Back alignment and domain information |
|---|
| >PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin [] | Back alignment and domain information |
|---|
| >cd03462 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) (type II enzymes) are homodimeric intradiol dioxygenases that degrade chlorocatechols via the addition of molecular oxygen and the subsequent cleavage between two adjacent hydroxyl groups | Back alignment and domain information |
|---|
| >cd03460 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate | Back alignment and domain information |
|---|
| >cd03464 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit | Back alignment and domain information |
|---|
| >COG2373 Large extracellular alpha-helical protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG2649 consensus Zinc carboxypeptidase [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02438 catachol_actin catechol 1,2-dioxygenase, Actinobacterial | Back alignment and domain information |
|---|
| >TIGR02439 catechol_proteo catechol 1,2-dioxygenase, proteobacterial | Back alignment and domain information |
|---|
| >TIGR02422 protocat_beta protocatechuate 3,4-dioxygenase, beta subunit | Back alignment and domain information |
|---|
| >TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit | Back alignment and domain information |
|---|
| >cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs) | Back alignment and domain information |
|---|
| >KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd03461 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) catalyzes the ring cleavage of hydroxyquinol (1,2,4-trihydroxybenzene), a intermediate in the degradation of a large variety of aromatic compounds including some polychloro- and nitroaromatic pollutants, to form 3-hydroxy-cis,cis-muconates | Back alignment and domain information |
|---|
| >KOG0518 consensus Actin-binding cytoskeleton protein, filamin [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd05822 TLP_HIUase HIUase (5-hydroxyisourate hydrolase) catalyzes the second step in a three-step ureide pathway in which 5-hydroxyisourate (HIU), a product of the uricase (urate oxidase) reaction, is hydrolyzed to 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline (OHCU) | Back alignment and domain information |
|---|
| >PF00576 Transthyretin: HIUase/Transthyretin family; InterPro: IPR023416 This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain | Back alignment and domain information |
|---|
| >KOG3006 consensus Transthyretin and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
| >PF02369 Big_1: Bacterial Ig-like domain (group 1); InterPro: IPR003344 Proteins that contain this domain are found in a variety of bacterial and phage surface proteins such as intimins | Back alignment and domain information |
|---|
| >TIGR00864 PCC polycystin cation channel protein | Back alignment and domain information |
|---|
| >cd05821 TLP_Transthyretin Transthyretin (TTR) is a 55 kDa protein responsible for the transport of thyroid hormones and retinol in vertebrates | Back alignment and domain information |
|---|
| >cd05469 Transthyretin_like Transthyretin_like | Back alignment and domain information |
|---|
| >PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 [] | Back alignment and domain information |
|---|
| >PF02369 Big_1: Bacterial Ig-like domain (group 1); InterPro: IPR003344 Proteins that contain this domain are found in a variety of bacterial and phage surface proteins such as intimins | Back alignment and domain information |
|---|
| >smart00095 TR_THY Transthyretin | Back alignment and domain information |
|---|
| >cd03457 intradiol_dioxygenase_like Intradiol dioxygenase supgroup | Back alignment and domain information |
|---|
| >cd00222 CollagenBindB Collagen-binding protein B domain, mediates bacterial adherence to collagen; the primary sequence has a non-repetitive, collagen-binding A region, followed by the repetitive B region; the B region has one to four 23 kDa repeat units (B1-B4) | Back alignment and domain information |
|---|
| >COG2373 Large extracellular alpha-helical protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF01060 DUF290: Transthyretin-like family; InterPro: IPR001534 This new apparently nematode-specific protein family has been called family 2 [] | Back alignment and domain information |
|---|
| >PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins | Back alignment and domain information |
|---|
| >smart00634 BID_1 Bacterial Ig-like domain (group 1) | Back alignment and domain information |
|---|
| >COG2351 Transthyretin-like protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd03457 intradiol_dioxygenase_like Intradiol dioxygenase supgroup | Back alignment and domain information |
|---|
| >COG5266 CbiK ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >COG5266 CbiK ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >PF10794 DUF2606: Protein of unknown function (DUF2606); InterPro: IPR019730 This entry represents bacterial proteins with unknown function | Back alignment and domain information |
|---|
| >PF07495 Y_Y_Y: Y_Y_Y domain; InterPro: IPR011123 This region is mostly found at the end of the beta propellers (IPR011110 from INTERPRO) in a family of two component regulators | Back alignment and domain information |
|---|
| >PRK15235 outer membrane fimbrial usher protein SefC; Provisional | Back alignment and domain information |
|---|
| >PF12866 DUF3823: Protein of unknown function (DUF3823); InterPro: IPR024278 This is a family of uncharacterised proteins from Bacteroidetes | Back alignment and domain information |
|---|
| >PF10794 DUF2606: Protein of unknown function (DUF2606); InterPro: IPR019730 This entry represents bacterial proteins with unknown function | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 61.4 bits (148), Expect = 1e-09
Identities = 84/635 (13%), Positives = 180/635 (28%), Gaps = 193/635 (30%)
Query: 118 SSEGSYLFKNIIPGKYKLRASHPNLSVEVRGSTEVELG-FENGEVDDIFFAPGYEIRGLV 176
+ E Y +K+I+ A N + + ++ E+D I
Sbjct: 11 TGEHQYQYKDILS--VFEDAFVDNF--DCKDVQDMPKSILSKEEIDHI------------ 54
Query: 177 VAQGNPILGVHIYLYSDDVGKVDCPQGSGNALGERKALCHAVSDADGKFMFKSV------ 230
+ + + G L+ + ++ V + KF+ +
Sbjct: 55 IMSKDAVSGTL-RLF-------WTLLSKQEEMVQK--FVEEVLRINYKFLMSPIKTEQRQ 104
Query: 231 PCGQYELVPHYKGENTVFDVSPSLVSMSV-RHQHVTV---------PEKFQVTGFSVGG- 279
P + + + +++ + +V R Q P K V V G
Sbjct: 105 PSMMTRMYIEQR--DRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKN-VLIDGVLGS 161
Query: 280 -------------RVVDENDMGVEGVKILVDGHERSITDR-----DGYYKL--------D 313
+V + D + + + + S Y++ D
Sbjct: 162 GKTWVALDVCLSYKVQCKMDFKIFWLNL---KNCNSPETVLEMLQKLLYQIDPNWTSRSD 218
Query: 314 QVTSNRYTIEAVKVHYK-FNKLKEY----MVLPNMASIADIKAISYDI-C---------G 358
++ + I +++ + K K Y +VL N+ + A +++ C
Sbjct: 219 HSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNA--FNLSCKILLTTRFKQ 276
Query: 359 VVRTVGSGNKVKVALTH--------------------GPDKVKPQVKQTDNNGNFCFEVP 398
V + + ++L H P + +V T+
Sbjct: 277 VTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN---------- 326
Query: 399 P------GE--------------YRLSAMAATPESSSGILFLPP------YADVVVKSPL 432
P E + ESS + L P + + V P
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESS--LNVLEPAEYRKMFDRLSVFPPS 384
Query: 433 LNIEFSQALVNVLGNVACKERCGPLVTVTLMR--LGQKHYDGTEKKTVSLTD-------- 482
+I + L + +V + +V L + L +K + T+S+
Sbjct: 385 AHIP-TILLSLIWFDV--IKSDVMVVVNKLHKYSLVEKQPK---ESTISIPSIYLELKVK 438
Query: 483 -DSDQFLFRDVLPGKYRLEVKRTSREAS-SMEDN-WCWEQSFIG--VDVGTNDVKGVEFV 537
+++ L R ++ Y + S + D + IG + + + F
Sbjct: 439 LENEYALHRSIV-DHYNIPKTFDSDDLIPPYLDQYFYS---HIGHHLKNIEHPERMTLF- 493
Query: 538 QKGY----WLNVISTHDVDAYMTQQDGSHVPLKVKKGSQHICVESPGVHNL-----HFVN 588
+ + +L HD A+ + ++K +IC P L F+
Sbjct: 494 RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLP 553
Query: 589 PC--VFFGSP---VLKMDTSNP-SPIYLKGEKYQL 617
S +L++ I+ + K Q+
Sbjct: 554 KIEENLICSKYTDLLRIALMAEDEAIFEEAHK-QV 587
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3k2m_C Monobody HA4; engineered binding protein, antibody mimic, protein-protein SH2 domain, ATP-binding, phosphoprotein; 1.75A {Homo sapiens} PDB: 3uyo_D 1ttf_A 1ttg_A 3rzw_A 1fna_A Length = 101 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1150 | |||
| 2pz4_A | 239 | Protein GBS052; SPAB, GRAM-positive pilins, adhesi | 99.21 | |
| 2pz4_A | 239 | Protein GBS052; SPAB, GRAM-positive pilins, adhesi | 99.15 | |
| 3kpt_A | 355 | Collagen adhesion protein; intramolecular amide bo | 98.88 | |
| 3kpt_A | 355 | Collagen adhesion protein; intramolecular amide bo | 98.88 | |
| 2x9x_A | 444 | RRGB, cell WALL surface anchor family protein; cel | 98.86 | |
| 2x9x_A | 444 | RRGB, cell WALL surface anchor family protein; cel | 98.82 | |
| 1cwv_A | 492 | Invasin; integrin-binding protein, INV gene, struc | 98.74 | |
| 2xtl_A | 452 | Cell WALL surface anchor family protein; GRAM-posi | 98.62 | |
| 2y1v_A | 605 | RRGB, cell WALL surface anchor family protein; str | 98.54 | |
| 2y1v_A | 605 | RRGB, cell WALL surface anchor family protein; str | 98.42 | |
| 3tkv_A | 414 | FDEC fragment B, attaching and effacing protein, p | 98.38 | |
| 2xtl_A | 452 | Cell WALL surface anchor family protein; GRAM-posi | 98.37 | |
| 1cwv_A | 492 | Invasin; integrin-binding protein, INV gene, struc | 98.03 | |
| 3irp_X | 429 | URO-adherence factor A; DEV-IGG fold, cell WALL, h | 97.91 | |
| 3tkv_A | 414 | FDEC fragment B, attaching and effacing protein, p | 97.84 | |
| 3mn8_A | 435 | LP15968P; catalytic domain of alpha/beta-hydrolase | 97.73 | |
| 1h8l_A | 380 | Carboxypeptidase GP180 residues 503-882; hydrolase | 97.71 | |
| 2x5p_A | 121 | FBA2, fibronectin binding protein; protein binding | 97.7 | |
| 1d2p_A | 373 | Collagen adhesin, CNA; IGG, IGSF, mscramm, structu | 97.56 | |
| 2nsm_A | 439 | Carboxypeptidase N catalytic chain; caroxypeptidas | 97.52 | |
| 2x5p_A | 121 | FBA2, fibronectin binding protein; protein binding | 97.49 | |
| 2pn5_A | 1325 | TEP1R, thioester-containing protein I; FULL-length | 97.38 | |
| 1uwy_A | 426 | Carboxypeptidase M; metallopeptidase, GPI-anchor, | 97.33 | |
| 2hr0_A | 645 | Complement C3 beta chain; complement component C3B | 97.3 | |
| 1d2p_A | 373 | Collagen adhesin, CNA; IGG, IGSF, mscramm, structu | 97.3 | |
| 2ww8_A | 893 | RRGA, cell WALL surface anchor family protein; IGG | 97.28 | |
| 3qdh_A | 290 | Fimbrial structural subunit; isopeptide bonds, act | 97.05 | |
| 1h8l_A | 380 | Carboxypeptidase GP180 residues 503-882; hydrolase | 96.91 | |
| 2nsm_A | 439 | Carboxypeptidase N catalytic chain; caroxypeptidas | 96.91 | |
| 3irp_X | 429 | URO-adherence factor A; DEV-IGG fold, cell WALL, h | 96.88 | |
| 3hr6_A | 436 | SPAA, putative surface-anchored fimbrial subunit; | 96.86 | |
| 3qec_A | 150 | Putative carbohydrate binding protein; suramin bin | 96.62 | |
| 3pf2_A | 319 | Cell WALL surface anchor family protein; pilus sha | 96.6 | |
| 3uxf_A | 488 | Fimbrial subunit type 1; adhesin, isopeptide, GRAM | 96.34 | |
| 3mn8_A | 435 | LP15968P; catalytic domain of alpha/beta-hydrolase | 96.3 | |
| 1uwy_A | 426 | Carboxypeptidase M; metallopeptidase, GPI-anchor, | 96.28 | |
| 3kcp_A | 321 | Cellulosomal-scaffolding protein A; dockerin, X-mo | 96.22 | |
| 2ww8_A | 893 | RRGA, cell WALL surface anchor family protein; IGG | 96.17 | |
| 1xpn_A | 170 | Hypothetical protein PA1324; B-barrel, structural | 95.98 | |
| 2boy_A | 254 | 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxi | 95.82 | |
| 2xsu_A | 312 | Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE | 95.76 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 95.72 | |
| 2pn5_A | 1325 | TEP1R, thioester-containing protein I; FULL-length | 95.66 | |
| 2azq_A | 311 | Catechol 1,2-dioxygenase; CTD, lipid, isozyme, int | 95.55 | |
| 2bum_B | 241 | Protocatechuate 3,4-dioxygenase beta chain; oxidor | 95.51 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 95.44 | |
| 3pf2_A | 319 | Cell WALL surface anchor family protein; pilus sha | 95.4 | |
| 1nkg_A | 508 | Rhamnogalacturonase B; polysaccharide lyase, carbo | 95.34 | |
| 3qva_A | 116 | Transthyretin-like protein; transthyretin-related | 95.26 | |
| 2hr0_A | 645 | Complement C3 beta chain; complement component C3B | 95.2 | |
| 1tmx_A | 293 | Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidor | 95.13 | |
| 3th1_A | 260 | Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxy | 95.12 | |
| 2xsu_A | 312 | Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE | 95.1 | |
| 1nkg_A | 508 | Rhamnogalacturonase B; polysaccharide lyase, carbo | 95.09 | |
| 1dmh_A | 311 | 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydroc | 95.04 | |
| 3cu7_A | 1676 | Complement C5; Mg domain, inflammation, anaphylato | 94.98 | |
| 3t63_M | 238 | 3,4-PCD, protocatechuate 3,4-dioxygenase beta chai | 94.95 | |
| 2boy_A | 254 | 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxi | 94.83 | |
| 2azq_A | 311 | Catechol 1,2-dioxygenase; CTD, lipid, isozyme, int | 94.76 | |
| 3n9t_A | 290 | PNPC; phospholipid binds, N-terminal helix tunnel, | 94.73 | |
| 2g2n_A | 114 | Transthyretin-like protein; transthyretin-related | 94.71 | |
| 2bum_A | 209 | Protocatechuate 3,4-dioxygenase alpha chain; oxido | 94.64 | |
| 3t63_A | 200 | 3,4-PCD, protocatechuate 3,4-dioxygenase alpha cha | 94.63 | |
| 3t1w_A | 375 | Four-domain fibronectin fragment; human fibronecti | 94.61 | |
| 3hhy_A | 280 | 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, | 94.57 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 94.54 | |
| 1dmh_A | 311 | 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydroc | 94.51 | |
| 3qdh_A | 290 | Fimbrial structural subunit; isopeptide bonds, act | 94.44 | |
| 3th1_A | 260 | Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxy | 94.4 | |
| 3t63_A | 200 | 3,4-PCD, protocatechuate 3,4-dioxygenase alpha cha | 94.4 | |
| 1f86_A | 115 | Transthyretin Thr119Met variant; protein stability | 94.37 | |
| 3e8v_A | 82 | Possible transglutaminase-family protein; structur | 94.35 | |
| 2bum_B | 241 | Protocatechuate 3,4-dioxygenase beta chain; oxidor | 94.23 | |
| 1tmx_A | 293 | Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidor | 94.23 | |
| 3hhy_A | 280 | 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, | 94.22 | |
| 3hrz_A | 627 | Cobra venom factor; serine protease, glycosilated, | 94.22 | |
| 3t63_M | 238 | 3,4-PCD, protocatechuate 3,4-dioxygenase beta chai | 94.18 | |
| 2h0e_A | 121 | Transthyretin-like protein PUCM; beta sandwitch, h | 94.12 | |
| 3n9t_A | 290 | PNPC; phospholipid binds, N-terminal helix tunnel, | 94.12 | |
| 4fxk_A | 656 | Complement C4 beta chain; immune system, proteolyt | 94.09 | |
| 3kcp_A | 321 | Cellulosomal-scaffolding protein A; dockerin, X-mo | 94.03 | |
| 2b39_A | 1661 | C3; thioester, immune defense, immune system; HET: | 93.96 | |
| 3o5u_A | 257 | Chlorocatechol 1,2-dioxygenase; beta barrel,oxidor | 93.95 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 93.93 | |
| 1oo2_A | 119 | Transthyretin; retinol-binding protein, tetramer, | 93.88 | |
| 2h4e_A | 127 | Transthyretin; amyloid, sulfite, familial amyloido | 93.85 | |
| 3o5u_A | 257 | Chlorocatechol 1,2-dioxygenase; beta barrel,oxidor | 93.74 | |
| 3hr6_A | 436 | SPAA, putative surface-anchored fimbrial subunit; | 93.51 | |
| 3prx_B | 1642 | Cobra venom factor; immune system, complement, imm | 93.48 | |
| 3qec_A | 150 | Putative carbohydrate binding protein; suramin bin | 93.32 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 93.3 | |
| 3iwv_A | 138 | 5-hydroxyisourate hydrolase; transthyretin, molecu | 93.21 | |
| 3e8v_A | 82 | Possible transglutaminase-family protein; structur | 93.16 | |
| 4ank_A | 147 | Transthyretin; hormone binding protein, thyroxine | 93.08 | |
| 2bum_A | 209 | Protocatechuate 3,4-dioxygenase alpha chain; oxido | 92.94 | |
| 2xi9_A | 457 | Ancillary protein 1; cell adhesion, GRAM positive | 92.87 | |
| 1xpn_A | 170 | Hypothetical protein PA1324; B-barrel, structural | 92.81 | |
| 1wlh_A | 311 | Gelation factor; ABP-120, filamin, immunoglobulin | 92.8 | |
| 1fnf_A | 368 | Fibronectin; RGD, extracellular matrix, cell adhes | 92.65 | |
| 3pdd_A | 190 | Glycoside hydrolase, family 9; CBHA, beta-sandwich | 92.61 | |
| 2x9z_A | 262 | RRGB, cell WALL surface anchor family protein; cel | 92.47 | |
| 3uxf_A | 488 | Fimbrial subunit type 1; adhesin, isopeptide, GRAM | 92.13 | |
| 1f86_A | 115 | Transthyretin Thr119Met variant; protein stability | 92.05 | |
| 1wlh_A | 311 | Gelation factor; ABP-120, filamin, immunoglobulin | 92.05 | |
| 4acq_A | 1451 | Alpha-2-macroglobulin; hydrolase inhibitor, protei | 92.01 | |
| 3qva_A | 116 | Transthyretin-like protein; transthyretin-related | 91.98 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 91.59 | |
| 2g2n_A | 114 | Transthyretin-like protein; transthyretin-related | 90.83 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 90.6 | |
| 2h4e_A | 127 | Transthyretin; amyloid, sulfite, familial amyloido | 90.56 | |
| 1oo2_A | 119 | Transthyretin; retinol-binding protein, tetramer, | 90.48 | |
| 2x9z_A | 262 | RRGB, cell WALL surface anchor family protein; cel | 90.39 | |
| 1qr4_A | 186 | Protein (tenascin); fibronectin type-III, heparin, | 89.26 | |
| 4ank_A | 147 | Transthyretin; hormone binding protein, thyroxine | 88.97 | |
| 3r8q_A | 290 | Fibronectin; heparin, FNIII, heparin binding, cell | 88.75 | |
| 1tdq_A | 283 | Tenascin-R; extracellular matrix, lecticans, tenas | 88.63 | |
| 2h0e_A | 121 | Transthyretin-like protein PUCM; beta sandwitch, h | 87.78 | |
| 1ti6_B | 274 | Pyrogallol hydroxytransferase small subunit; molyb | 87.48 | |
| 2xi9_A | 457 | Ancillary protein 1; cell adhesion, GRAM positive | 87.47 | |
| 1ti6_B | 274 | Pyrogallol hydroxytransferase small subunit; molyb | 86.74 | |
| 3iwv_A | 138 | 5-hydroxyisourate hydrolase; transthyretin, molecu | 85.76 | |
| 2gee_A | 203 | Hypothetical protein; fibronectin, EIIIB, cancer, | 85.36 | |
| 1f00_I | 282 | Intimin; immunoglobulin-like fold, C-type lectin-l | 84.51 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 84.06 | |
| 4fxt_A | 202 | Uncharacterized protein; PF12866 family, DUF3823, | 84.01 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 83.5 | |
| 1d2o_A | 187 | Collagen adhesin, CNA; beta sandwich, IGG, IGSF, s | 82.59 | |
| 4acq_A | 1451 | Alpha-2-macroglobulin; hydrolase inhibitor, protei | 82.42 | |
| 2k7p_A | 188 | Filamin-A; IG-like, ABP-280, actin binding protein | 82.32 | |
| 3tes_A | 98 | Tencon; fibronectin type III domain, FN3, consensu | 82.27 | |
| 2k7q_A | 191 | Filamin-A; IG-like, ABP-280, actin binding protein | 82.05 | |
| 1qfh_A | 212 | Protein (gelation factor); actin binding protein, | 81.88 | |
| 2vkw_A | 209 | Neural cell adhesion molecule 1,140 kDa isoform; a | 81.63 | |
| 3lpw_A | 197 | A77-A78 domain from titin; intracellular FNIII-tan | 81.17 | |
| 3p4l_A | 211 | Neogenin; iron homeostasis, hemojuvelin receptor, | 80.45 | |
| 1r6v_A | 671 | Subtilisin-like serine protease; sandwich domain, | 80.01 |
| >3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A | Back alignment and structure |
|---|
| >3kpt_A Collagen adhesion protein; intramolecular amide bond, pilin subunit, beta sheet; 2.10A {Bacillus cereus atcc 14579} PDB: 3rkp_A | Back alignment and structure |
|---|
| >2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A | Back alignment and structure |
|---|
| >2x9x_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.50A {Streptococcus pneumoniae} PDB: 2x9w_A 2x9y_A | Back alignment and structure |
|---|
| >1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3 | Back alignment and structure |
|---|
| >2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A | Back alignment and structure |
|---|
| >2y1v_A RRGB, cell WALL surface anchor family protein; structural protein, major pilin, pilus assembly; 2.39A {Streptococcus pneumoniae} PDB: 3rpk_A | Back alignment and structure |
|---|
| >2xtl_A Cell WALL surface anchor family protein; GRAM-positive PILI protein, BP-2A 515 allele, immunoglobulin domains, structural protein; 1.75A {Streptococcus agalactiae} | Back alignment and structure |
|---|
| >1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3 | Back alignment and structure |
|---|
| >3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X | Back alignment and structure |
|---|
| >3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* | Back alignment and structure |
|---|
| >2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes} | Back alignment and structure |
|---|
| >1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1 | Back alignment and structure |
|---|
| >2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes} | Back alignment and structure |
|---|
| >2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 | Back alignment and structure |
|---|
| >2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A* | Back alignment and structure |
|---|
| >1d2p_A Collagen adhesin, CNA; IGG, IGSF, mscramm, structural protein; 2.50A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 b.3.5.1 b.3.5.1 | Back alignment and structure |
|---|
| >2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii} | Back alignment and structure |
|---|
| >1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* | Back alignment and structure |
|---|
| >2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X | Back alignment and structure |
|---|
| >3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X* | Back alignment and structure |
|---|
| >3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A | Back alignment and structure |
|---|
| >3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris} | Back alignment and structure |
|---|
| >3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 | Back alignment and structure |
|---|
| >3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B | Back alignment and structure |
|---|
| >2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1 | Back alignment and structure |
|---|
| >2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus} | Back alignment and structure |
|---|
| >2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A* | Back alignment and structure |
|---|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
| >2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae} | Back alignment and structure |
|---|
| >2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida} | Back alignment and structure |
|---|
| >2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B* | Back alignment and structure |
|---|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
| >3pf2_A Cell WALL surface anchor family protein; pilus shaft component, IGG-DEV fold, IGG-REV fold, CNA A TYP type, IG-like fold; 1.70A {Streptococcus agalactiae serogroup V} PDB: 3pg2_A | Back alignment and structure |
|---|
| >1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A | Back alignment and structure |
|---|
| >3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A* | Back alignment and structure |
|---|
| >1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex} | Back alignment and structure |
|---|
| >3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida} | Back alignment and structure |
|---|
| >2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A* | Back alignment and structure |
|---|
| >1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A | Back alignment and structure |
|---|
| >1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A* | Back alignment and structure |
|---|
| >3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A | Back alignment and structure |
|---|
| >3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ... | Back alignment and structure |
|---|
| >2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus} | Back alignment and structure |
|---|
| >2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida} | Back alignment and structure |
|---|
| >3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida} | Back alignment and structure |
|---|
| >2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A | Back alignment and structure |
|---|
| >2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A* | Back alignment and structure |
|---|
| >3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ... | Back alignment and structure |
|---|
| >3t1w_A Four-domain fibronectin fragment; human fibronectin, FN type-III domain, oncofetal splice VARI extra-domain B, EIIIB, ED-B, angiogenesis, integrin; 2.40A {Homo sapiens} PDB: 4gh7_B | Back alignment and structure |
|---|
| >3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A* | Back alignment and structure |
|---|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
| >1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A* | Back alignment and structure |
|---|
| >3qdh_A Fimbrial structural subunit; isopeptide bonds, actinomyces type 2 fimbriae, CNAA/DEV-IGG CNAB/IGG-REV fold, cell ahdesion, pilin; 1.90A {Actinomyces naeslundii} | Back alignment and structure |
|---|
| >3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida} | Back alignment and structure |
|---|
| >3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ... | Back alignment and structure |
|---|
| >1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ... | Back alignment and structure |
|---|
| >3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
| >2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B* | Back alignment and structure |
|---|
| >1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex} | Back alignment and structure |
|---|
| >3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A* | Back alignment and structure |
|---|
| >3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A* | Back alignment and structure |
|---|
| >3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ... | Back alignment and structure |
|---|
| >2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A* | Back alignment and structure |
|---|
| >3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida} | Back alignment and structure |
|---|
| >4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A* | Back alignment and structure |
|---|
| >3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B | Back alignment and structure |
|---|
| >2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus} | Back alignment and structure |
|---|
| >3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A* | Back alignment and structure |
|---|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
| >1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A* | Back alignment and structure |
|---|
| >2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A | Back alignment and structure |
|---|
| >3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A* | Back alignment and structure |
|---|
| >3hr6_A SPAA, putative surface-anchored fimbrial subunit; multiple IG-like domains, cell WALL, peptidoglycan-anchor, structural protein; 1.60A {Corynebacterium diphtheriae} PDB: 3htl_X* | Back alignment and structure |
|---|
| >3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B* | Back alignment and structure |
|---|
| >3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
| >3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A | Back alignment and structure |
|---|
| >3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
| >4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A* | Back alignment and structure |
|---|
| >2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A | Back alignment and structure |
|---|
| >1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1 | Back alignment and structure |
|---|
| >1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A | Back alignment and structure |
|---|
| >1fnf_A Fibronectin; RGD, extracellular matrix, cell adhesion protein; 2.00A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 b.1.2.1 PDB: 1mfn_A 2mfn_A 2ck2_A | Back alignment and structure |
|---|
| >3pdd_A Glycoside hydrolase, family 9; CBHA, beta-sandwich, cellulosome, unknown function; 1.72A {Clostridium thermocellum} PDB: 3pdg_A | Back alignment and structure |
|---|
| >2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >3uxf_A Fimbrial subunit type 1; adhesin, isopeptide, GRAM-positive, beta sandwich, surface, cell adhesion; 1.60A {Actinomyces oris} | Back alignment and structure |
|---|
| >1f86_A Transthyretin Thr119Met variant; protein stability, X-RAY amyloidogenesis, transport protein; HET: T44; 1.10A {Homo sapiens} SCOP: b.3.4.1 PDB: 1fhn_A 1bze_A 1fh2_A 1bzd_A 3fcb_A* 3fc8_A* 3cfm_A 3cfn_A* 3cfq_A* 3cft_A* 3m1o_A* 1bmz_A 1bm7_A 1e3f_A* 1e5a_A* 1e4h_A 1ict_A* 1tt6_A* 1tta_A 1tyr_A* ... | Back alignment and structure |
|---|
| >1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A | Back alignment and structure |
|---|
| >4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens} | Back alignment and structure |
|---|
| >3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
| >2g2n_A Transthyretin-like protein; transthyretin-related protein, unknown functi; 1.65A {Escherichia coli} PDB: 2g2p_A 2igl_A 2gpz_A | Back alignment and structure |
|---|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
| >2h4e_A Transthyretin; amyloid, sulfite, familial amyloidotic polyne transport protein; HET: CSU; 1.45A {Homo sapiens} SCOP: b.3.4.1 PDB: 2wqa_A* 1zcr_A 1zd6_A 2trh_A 1bz8_A 2qpf_A 1tfp_A | Back alignment and structure |
|---|
| >1oo2_A Transthyretin; retinol-binding protein, tetramer, transport protein; 1.56A {Sparus aurata} SCOP: b.3.4.1 PDB: 1sn2_A 1sn0_A 1sn5_A* | Back alignment and structure |
|---|
| >2x9z_A RRGB, cell WALL surface anchor family protein; cell adhesion; 1.30A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
| >1qr4_A Protein (tenascin); fibronectin type-III, heparin, extracellular matrix, adhesion, fusion protein, structural protein; 2.55A {Gallus gallus} SCOP: b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
| >4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
| >3r8q_A Fibronectin; heparin, FNIII, heparin binding, cell adhesion; 2.40A {Homo sapiens} PDB: 1fnh_A | Back alignment and structure |
|---|
| >1tdq_A Tenascin-R; extracellular matrix, lecticans, tenascins, protein-protein interactions, C-type lectin domain; 2.60A {Rattus norvegicus} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 | Back alignment and structure |
|---|
| >2h0e_A Transthyretin-like protein PUCM; beta sandwitch, hydrolase, HIU; 2.20A {Bacillus subtilis} PDB: 2h0f_A* 2h0j_A* | Back alignment and structure |
|---|
| >1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N* | Back alignment and structure |
|---|
| >2xi9_A Ancillary protein 1; cell adhesion, GRAM positive pilus, intramolecular isopeptid internal thioester; 1.90A {Streptococcus pyogenes} PDB: 2xic_A 2xid_A | Back alignment and structure |
|---|
| >1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N* | Back alignment and structure |
|---|
| >3iwv_A 5-hydroxyisourate hydrolase; transthyretin, molecular evolution, URIC acid degradation, T hormones, peroxisome, purine metabolism; 1.68A {Danio rerio} PDB: 3iwu_A 3q1e_A 2h6u_A 2h1x_A | Back alignment and structure |
|---|
| >2gee_A Hypothetical protein; fibronectin, EIIIB, cancer, neovascularization, cell adhesion, protein binding, oncoprotein; 2.01A {Homo sapiens} PDB: 2fnb_A | Back alignment and structure |
|---|
| >1f00_I Intimin; immunoglobulin-like fold, C-type lectin-like fold, cell adhesion; 1.90A {Escherichia coli} SCOP: b.1.14.1 b.1.14.1 d.169.1.3 PDB: 1f02_I 1e5u_I | Back alignment and structure |
|---|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
| >4fxt_A Uncharacterized protein; PF12866 family, DUF3823, structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.77A {Bacteroides ovatus} | Back alignment and structure |
|---|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >1d2o_A Collagen adhesin, CNA; beta sandwich, IGG, IGSF, structural protein; 2.00A {Staphylococcus aureus} SCOP: b.3.5.1 b.3.5.1 | Back alignment and structure |
|---|
| >4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >3tes_A Tencon; fibronectin type III domain, FN3, consensus design, de novo; 2.50A {Synthetic} | Back alignment and structure |
|---|
| >2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens} | Back alignment and structure |
|---|
| >1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 | Back alignment and structure |
|---|
| >2vkw_A Neural cell adhesion molecule 1,140 kDa isoform; adhesion receptor; 2.3A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 PDB: 2vkx_A 1lwr_A | Back alignment and structure |
|---|
| >3lpw_A A77-A78 domain from titin; intracellular FNIII-tandem, structural protein; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >3p4l_A Neogenin; iron homeostasis, hemojuvelin receptor, FNIII domain, fibron type III, cell adhesion; 1.80A {Homo sapiens} PDB: 1x5k_A | Back alignment and structure |
|---|
| >1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1 | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1150 | |||
| d1h8la1 | 79 | Carboxypeptidase D C-terminal domain {Crested duck | 98.66 | |
| d1vlfn1 | 79 | Transhydroxylase beta subunit, BthL, C-terminal do | 98.63 | |
| d1nkga1 | 87 | Rhamnogalacturonase B, RhgB, middle domain {Asperg | 98.53 | |
| d1vlfn1 | 79 | Transhydroxylase beta subunit, BthL, C-terminal do | 98.44 | |
| d1h8la1 | 79 | Carboxypeptidase D C-terminal domain {Crested duck | 98.38 | |
| d1uwya1 | 107 | Carboxypeptidase M C-terminal domain {Human (Homo | 98.16 | |
| d1nkga1 | 87 | Rhamnogalacturonase B, RhgB, middle domain {Asperg | 98.11 | |
| d1uwya1 | 107 | Carboxypeptidase M C-terminal domain {Human (Homo | 97.84 | |
| d2b59b2 | 96 | Cellulosomal scaffolding protein A {Clostridium th | 95.67 | |
| d2burb1 | 238 | Protocatechuate-3,4-dioxygenase, beta chain {Acine | 95.64 | |
| d1xpna_ | 170 | Hypothetical protein PA1324 {Pseudomonas aeruginos | 95.59 | |
| d3pccm_ | 236 | Protocatechuate-3,4-dioxygenase, beta chain {Pseud | 95.5 | |
| d1s9aa_ | 256 | Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus | 95.38 | |
| d1dmha_ | 309 | Catechol 1,2-dioxygenase {Acinetobacter calcoaceti | 95.23 | |
| d2burb1 | 238 | Protocatechuate-3,4-dioxygenase, beta chain {Acine | 95.11 | |
| d1s9aa_ | 256 | Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus | 94.98 | |
| d3pcca_ | 200 | Protocatechuate-3,4-dioxygenase, alpha chain {Pseu | 94.92 | |
| d3pccm_ | 236 | Protocatechuate-3,4-dioxygenase, beta chain {Pseud | 94.91 | |
| d1dmha_ | 309 | Catechol 1,2-dioxygenase {Acinetobacter calcoaceti | 94.76 | |
| d3pcca_ | 200 | Protocatechuate-3,4-dioxygenase, alpha chain {Pseu | 94.26 | |
| d1cwva1 | 94 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 93.56 | |
| d1f86a_ | 115 | Transthyretin (synonym: prealbumin) {Human (Homo s | 93.3 | |
| d2bura1 | 202 | Protocatechuate-3,4-dioxygenase, alpha chain {Acin | 92.95 | |
| d2bura1 | 202 | Protocatechuate-3,4-dioxygenase, alpha chain {Acin | 92.88 | |
| d1oo2a_ | 116 | Transthyretin (synonym: prealbumin) {Gilthead seab | 92.59 | |
| d2b59b2 | 96 | Cellulosomal scaffolding protein A {Clostridium th | 89.28 | |
| d1xpna_ | 170 | Hypothetical protein PA1324 {Pseudomonas aeruginos | 89.28 | |
| d1f00i1 | 95 | Intimin {Escherichia coli [TaxId: 562]} | 88.92 | |
| d1f86a_ | 115 | Transthyretin (synonym: prealbumin) {Human (Homo s | 88.87 | |
| d1cwva1 | 94 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 88.19 | |
| d1cwva2 | 96 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 87.53 | |
| d1oo2a_ | 116 | Transthyretin (synonym: prealbumin) {Gilthead seab | 87.28 | |
| d2vkwa2 | 93 | Neural cell adhesion molecule 1, NCAM {Human (Homo | 86.8 | |
| d1f00i1 | 95 | Intimin {Escherichia coli [TaxId: 562]} | 84.01 | |
| d1cwva3 | 103 | Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | 83.74 | |
| d1tdqa3 | 86 | Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | 81.43 | |
| d2fnba_ | 95 | Fibronectin, different Fn3 modules {Human (Homo sa | 80.14 | |
| d2cuha1 | 102 | Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | 80.06 |
| >d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Prealbumin-like superfamily: Carboxypeptidase regulatory domain-like family: Carboxypeptidase regulatory domain domain: Carboxypeptidase D C-terminal domain species: Crested duck (Lophonetta specularioides) [TaxId: 8836]
Probab=98.66 E-value=4.5e-08 Score=85.63 Aligned_cols=74 Identities=19% Similarity=0.171 Sum_probs=60.0
Q ss_pred EEEEEEeC-CCccccCeEEEEcceee-eEeCCCceEEECccCCccEEEEEEeccccccceeeEEEcCCcceeeeEEEe
Q 001120 277 VGGRVVDE-NDMGVEGVKILVDGHER-SITDRDGYYKLDQVTSNRYTIEAVKVHYKFNKLKEYMVLPNMASIADIKAI 352 (1150)
Q Consensus 277 V~G~V~d~-~G~plaGA~V~l~G~~~-~~TD~dG~f~l~~L~pG~Ytv~~~~~~y~~~~~~~v~v~p~~~~i~dI~~~ 352 (1150)
|+|+|.|. +|+||+||.|.+.+... +.||++|.|.+ .|+||+|+|.+++++|..... .+.+.++.....|+.+.
T Consensus 2 I~G~V~d~~tg~pi~~a~V~v~~~~~~~~Td~~G~f~~-~l~~G~y~l~vs~~Gy~~~~~-~v~v~~~~~~~~~~~L~ 77 (79)
T d1h8la1 2 IWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWR-LLVQGTYKVTASARGYDPVTK-TVEVDSKGGVQVNFTLS 77 (79)
T ss_dssp EEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEEE-CCCSEEEEEEEECTTBCCEEE-EEEECSSCEEECCEEEC
T ss_pred cEEEEEECCCCCCcCCeEEEEeCccccEEecCCCCEEE-EeecccEEEEEEEEEeccEEE-EEEECCCCeEEEEEEEc
Confidence 78999997 79999999999976544 68999999977 799999999999999866554 56776665444566553
|
| >d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]} | Back information, alignment and structure |
|---|
| >d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]} | Back information, alignment and structure |
|---|
| >d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} | Back information, alignment and structure |
|---|
| >d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]} | Back information, alignment and structure |
|---|
| >d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d2burb1 b.3.6.1 (B:303-540) Protocatechuate-3,4-dioxygenase, beta chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d1xpna_ b.3.7.1 (A:) Hypothetical protein PA1324 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d3pccm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1s9aa_ b.3.6.1 (A:) Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus [TaxId: 37919]} | Back information, alignment and structure |
|---|
| >d1dmha_ b.3.6.1 (A:) Catechol 1,2-dioxygenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d2burb1 b.3.6.1 (B:303-540) Protocatechuate-3,4-dioxygenase, beta chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d1s9aa_ b.3.6.1 (A:) Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus [TaxId: 37919]} | Back information, alignment and structure |
|---|
| >d3pcca_ b.3.6.1 (A:) Protocatechuate-3,4-dioxygenase, alpha chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d3pccm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1dmha_ b.3.6.1 (A:) Catechol 1,2-dioxygenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d3pcca_ b.3.6.1 (A:) Protocatechuate-3,4-dioxygenase, alpha chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
| >d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bura1 b.3.6.1 (A:4-200) Protocatechuate-3,4-dioxygenase, alpha chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d2bura1 b.3.6.1 (A:4-200) Protocatechuate-3,4-dioxygenase, alpha chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]} | Back information, alignment and structure |
|---|
| >d1oo2a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Gilthead seabream (Sparus aurata) [TaxId: 8175]} | Back information, alignment and structure |
|---|
| >d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
| >d1xpna_ b.3.7.1 (A:) Hypothetical protein PA1324 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1f00i1 b.1.14.1 (I:658-752) Intimin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1f86a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d1cwva2 b.1.14.1 (A:597-692) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d1oo2a_ b.3.4.1 (A:) Transthyretin (synonym: prealbumin) {Gilthead seabream (Sparus aurata) [TaxId: 8175]} | Back information, alignment and structure |
|---|
| >d2vkwa2 b.1.2.1 (A:601-693) Neural cell adhesion molecule 1, NCAM {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1f00i1 b.1.14.1 (I:658-752) Intimin {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1cwva3 b.1.14.1 (A:693-795) Invasin {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
| >d1tdqa3 b.1.2.1 (A:186-271) Tenascin {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
| >d2fnba_ b.1.2.1 (A:) Fibronectin, different Fn3 modules {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2cuha1 b.1.2.1 (A:8-109) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|