Citrus Sinensis ID: 001156
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1135 | 2.2.26 [Sep-21-2011] | |||||||
| Q9FLQ7 | 1649 | Formin-like protein 20 OS | yes | no | 0.520 | 0.358 | 0.605 | 0.0 | |
| Q6ZCX3 | 1364 | Formin-like protein 6 OS= | yes | no | 0.301 | 0.250 | 0.590 | 1e-129 | |
| Q84ZL0 | 1627 | Formin-like protein 5 OS= | yes | no | 0.374 | 0.261 | 0.498 | 1e-126 | |
| Q9LVN1 | 1266 | Formin-like protein 13 OS | no | no | 0.362 | 0.324 | 0.497 | 1e-122 | |
| Q7XWS7 | 1669 | Formin-like protein 12 OS | yes | no | 0.312 | 0.212 | 0.519 | 1e-107 | |
| Q9C6S1 | 1230 | Formin-like protein 14 OS | no | no | 0.266 | 0.246 | 0.539 | 1e-106 | |
| Q9SK28 | 1111 | Formin-like protein 18 OS | no | no | 0.237 | 0.242 | 0.627 | 1e-105 | |
| Q6K8Z4 | 1385 | Formin-like protein 7 OS= | no | no | 0.296 | 0.242 | 0.509 | 1e-99 | |
| P0C5K3 | 352 | Putative formin-like prot | no | no | 0.221 | 0.713 | 0.594 | 8e-94 | |
| Q7G6K7 | 1234 | Formin-like protein 3 OS= | no | no | 0.249 | 0.229 | 0.519 | 1e-90 |
| >sp|Q9FLQ7|FH20_ARATH Formin-like protein 20 OS=Arabidopsis thaliana GN=FH20 PE=2 SV=3 | Back alignment and function desciption |
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Score = 750 bits (1936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/647 (60%), Positives = 464/647 (71%), Gaps = 56/647 (8%)
Query: 1 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDDYKSYMGGIVAQLQDHFPDASF 60
MALFRRFFY+KPPDRLLEISERVYVFDCCFS+DV+ ED+YK Y+GGIVAQLQDHFP+ASF
Sbjct: 1 MALFRRFFYKKPPDRLLEISERVYVFDCCFSSDVMGEDEYKVYLGGIVAQLQDHFPEASF 60
Query: 61 MVFNFREGEKRSQISDILSQYDMTVMDYPREYEHCPLLPLEMIHHFLRSSESWLSLEGQQ 120
MVFNFREGE+RSQISD+LSQYDMTVMDYPR+YE CPLLPLEMIHHFLRSSESWLSLEGQQ
Sbjct: 61 MVFNFREGEQRSQISDVLSQYDMTVMDYPRQYESCPLLPLEMIHHFLRSSESWLSLEGQQ 120
Query: 121 NVLLMHCERGGWPVLAFMLAGLLLYRKQYTGELKTLEMVYKQAPRELLHLLSPLNPQPSQ 180
NVLLMHCERGGWPVLAFML+GLLLYRKQY GE KTLEMV+KQAP+ELLHLLSPLNPQPSQ
Sbjct: 121 NVLLMHCERGGWPVLAFMLSGLLLYRKQYHGEQKTLEMVHKQAPKELLHLLSPLNPQPSQ 180
Query: 181 LRYLQYISRRNLGSDWPPSDTPLLLNCLILRVLPIY-GGNGCRPVIRVYGQDSKIPANRS 239
LRYLQYISRRNLGSDWPPSDTPLLL+CLILR LP + G GCRP++RVYGQD K NRS
Sbjct: 181 LRYLQYISRRNLGSDWPPSDTPLLLDCLILRDLPHFEGKKGCRPILRVYGQDPKARTNRS 240
Query: 240 SKLLFSTFKFKTNVRHYLQDECALVKIDIYCRVQGDVVIECVHLEDDLVREEMMFRVMFH 299
S LLFST K K + R Y Q+EC LVK+DI CRVQGDVV+EC+HL DDLV EEM+FR+MFH
Sbjct: 241 SILLFSTLKTKKHTRLYQQEECILVKLDIQCRVQGDVVLECIHLHDDLVSEEMVFRIMFH 300
Query: 300 TAF------------------------------VLFSDADAVVPNLTTVAAVEDGVETES 329
TAF VLFS ADAVVP +TT +D + +
Sbjct: 301 TAFVRANILMLQRDEMDILWDVKDQFPKEFKAEVLFSGADAVVPPITTSTLSDDENDFDM 360
Query: 330 ASPEEFFEVEEIFSNVVDGQEAKGENDSQIVHDGIPSDTDLKEVWTEAVDPLSFQDCASD 389
SPEEFFEVEEIFS+V+DG + K ++DS +V D D++ KEVW V+P +F DCASD
Sbjct: 361 TSPEEFFEVEEIFSDVIDGPDHKRDSDSFVVVDTASDDSEGKEVWKGDVEPNAFLDCASD 420
Query: 390 DRNYKHDVKVDPNTDTVKDIAVDDVKYTLSEKVDSDIHAVKDITVDDGDIKLDPMVIVA- 448
D N+KHD+ + +TD VKDI VDDV+Y K DS+I +VKDI +DDGD + + A
Sbjct: 421 DSNHKHDMHAETSTDPVKDITVDDVQYRSDGKADSNIDSVKDIGIDDGDEQRKRRTVEAK 480
Query: 449 -NVLRNIETKELTGHVCDKLEVIEDKSDSEDAAVLKNSESKLLRQKSDKVPPPAPKKQPM 507
N ++T+ + LE + K+++ S +K + +K P +KQ
Sbjct: 481 ENDSSTVQTQSKGDEESNDLESMSQKTNT--------SLNKPISEK----PQATLRKQVG 528
Query: 508 QNTKP-AADTVVKQKIKQQELQSANARIAKPNTVSRWIPPNKGSYTNSMHVSYPPSRYNS 566
N KP AA +K K KQQE Q N R+AKPN VSRWIP NKGSY +SMHV+YPP+R NS
Sbjct: 529 ANAKPAAAGDSLKPKSKQQETQGPNVRMAKPNAVSRWIPSNKGSYKDSMHVAYPPTRINS 588
Query: 567 APPALALTSPKEPGSGTNSRGSSPLTSPGSVASKDVTTEQISSGTNS 613
AP ++ T+ + TSP V KD T+ + + +S
Sbjct: 589 APASIT----------TSLKDGKRATSPDGVIPKDAKTKYLRASVSS 625
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q6ZCX3|FH6_ORYSJ Formin-like protein 6 OS=Oryza sativa subsp. japonica GN=FH6 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q84ZL0|FH5_ORYSJ Formin-like protein 5 OS=Oryza sativa subsp. japonica GN=FH5 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q9LVN1|FH13_ARATH Formin-like protein 13 OS=Arabidopsis thaliana GN=FH13 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q7XWS7|FH12_ORYSJ Formin-like protein 12 OS=Oryza sativa subsp. japonica GN=FH12 PE=3 SV=3 | Back alignment and function description |
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| >sp|Q9C6S1|FH14_ARATH Formin-like protein 14 OS=Arabidopsis thaliana GN=FH14 PE=3 SV=3 | Back alignment and function description |
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| >sp|Q9SK28|FH18_ARATH Formin-like protein 18 OS=Arabidopsis thaliana GN=FH18 PE=2 SV=2 | Back alignment and function description |
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| >sp|Q6K8Z4|FH7_ORYSJ Formin-like protein 7 OS=Oryza sativa subsp. japonica GN=FH7 PE=2 SV=2 | Back alignment and function description |
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| >sp|P0C5K3|FH15B_ARATH Putative formin-like protein 15b OS=Arabidopsis thaliana GN=FH15B PE=3 SV=1 | Back alignment and function description |
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| >sp|Q7G6K7|FH3_ORYSJ Formin-like protein 3 OS=Oryza sativa subsp. japonica GN=FH3 PE=2 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1135 | ||||||
| 449441069 | 1275 | PREDICTED: formin-like protein 20-like [ | 0.540 | 0.480 | 0.623 | 0.0 | |
| 356513519 | 1207 | PREDICTED: formin-like protein 20-like [ | 0.545 | 0.512 | 0.622 | 0.0 | |
| 449532645 | 715 | PREDICTED: formin-like protein 20-like [ | 0.540 | 0.857 | 0.623 | 0.0 | |
| 356565119 | 1421 | PREDICTED: formin-like protein 20-like [ | 0.535 | 0.427 | 0.629 | 0.0 | |
| 255547317 | 1550 | conserved hypothetical protein [Ricinus | 0.520 | 0.381 | 0.616 | 0.0 | |
| 334302903 | 1649 | RecName: Full=Formin-like protein 20; Sh | 0.520 | 0.358 | 0.605 | 0.0 | |
| 297733937 | 1010 | unnamed protein product [Vitis vinifera] | 0.444 | 0.5 | 0.633 | 0.0 | |
| 356519080 | 1287 | PREDICTED: formin-like protein 20-like [ | 0.496 | 0.438 | 0.586 | 0.0 | |
| 359491311 | 1498 | PREDICTED: formin-like protein 6-like [V | 0.428 | 0.324 | 0.665 | 0.0 | |
| 356507105 | 1290 | PREDICTED: formin-like protein 20-like [ | 0.488 | 0.429 | 0.573 | 0.0 |
| >gi|449441069|ref|XP_004138306.1| PREDICTED: formin-like protein 20-like [Cucumis sativus] | Back alignment and taxonomy information |
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Score = 822 bits (2123), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/694 (62%), Positives = 511/694 (73%), Gaps = 81/694 (11%)
Query: 1 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDDYKSYMGGIVAQLQDHFPDASF 60
MALFRRFFYRKPPDRLLEISERVYVFDCCFST+VLEE++YK Y+ GIVAQLQ HFPDASF
Sbjct: 1 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASF 60
Query: 61 MVFNFREGEKRSQISDILSQYDMTVMDYPREYEHCPLLPLEMIHHFLRSSESWLSLEGQQ 120
MVFNFREG +RSQISD+L+QYDMTVMDYPR+YE CPLLPLEMIHHFLRSSESWLSLEGQQ
Sbjct: 61 MVFNFREGGRRSQISDVLTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQ 120
Query: 121 NVLLMHCERGGWPVLAFMLAGLLLYRKQYTGELKTLEMVYKQAPRELLHLLSPLNPQPSQ 180
NVLLMHCERGGWPVLAFMLAGLLLYRKQY+GE KTLEMVYKQAP+ELLHLLS LNPQPSQ
Sbjct: 121 NVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSSLNPQPSQ 180
Query: 181 LRYLQYISRRNLGSDWPPSDTPLLLNCLILRVLPIY-GGNGCRPVIRVYGQDSKIPANRS 239
LRYLQYISRRNLGSDWPPSDTPL+L+CLILRVLP++ GG GCRPV+R+YGQD PANR+
Sbjct: 181 LRYLQYISRRNLGSDWPPSDTPLILDCLILRVLPLFDGGKGCRPVVRIYGQDPSAPANRT 240
Query: 240 SKLLFSTFKFKTNVRHYLQDECALVKIDIYCRVQGDVVIECVHLEDDLVREEMMFRVMFH 299
SKLLFST + ++R+YLQ EC LVKIDI+C VQGDVV+EC+H+++DLV EEMMFRVMFH
Sbjct: 241 SKLLFSTPIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHMDEDLVHEEMMFRVMFH 300
Query: 300 TAFV------------------------------LFSDADAVVPNLTTVAAVEDGVETES 329
TAFV LF DADAVVPNLT EDG ET +
Sbjct: 301 TAFVRSNIMILNRDEVDVLWDARDQYPKDFRVEALFLDADAVVPNLTASFDDEDGNETGA 360
Query: 330 ASPEEFFEVEEIFSNVVDGQEAKGENDSQIVHDGIPSDTDLKEVWTEAVDPLSFQDCASD 389
ASPEEFFEVEEIFSNV+DGQEAKG ND +V+ + KE W E DP +FQDCASD
Sbjct: 361 ASPEEFFEVEEIFSNVMDGQEAKGSNDPHVVN-----HVNRKEEWKEDFDPPAFQDCASD 415
Query: 390 DRNYKHDVKVDPNTDTVKDIAVDDVKYTLSEKVDSDIHAVKDITVDDGDIKLDPMVIVAN 449
D N KH K D D VKDI VDDVKY L E + S+++AVKDI VDDG++ + ++ N
Sbjct: 416 DGNLKHYKKSD--FDAVKDITVDDVKYKLDENIYSELNAVKDIAVDDGEMNSNSFLVATN 473
Query: 450 VLRNIETKELTGHVCDKLEVIEDKSDSEDAAVLKNSESKLL---------RQKSDKVPPP 500
V +++ + L +K E +E+K D D + K E+K+L RQKS+K+ P
Sbjct: 474 VPTHVKVQGLVDDAYEKFEDMEEKDDGRDTSPEK-LENKVLQKKLSADGSRQKSEKLQTP 532
Query: 501 APKKQPMQNTKPAADT-VVKQKIKQQELQSANARIAKPNTVSRWIPPNKGSYTNSMHVSY 559
PKKQP+ + KP D + KQK+KQQE Q +A+ AKPN VSRWIPPNKGSY NSMHVSY
Sbjct: 533 IPKKQPVSSGKPTNDMGLTKQKVKQQETQGFSAKQAKPNAVSRWIPPNKGSYMNSMHVSY 592
Query: 560 PPSRYNSAPPALALTSPKEPGSGTNSRGSSPLTSPGSVASKDVTTEQISSGTNSNASSTL 619
PPSRYNSAP ALA S+AS ++ +++ + + A++TL
Sbjct: 593 PPSRYNSAPAALA-----------------------SIAS----SKDVNANSKTKATATL 625
Query: 620 ISPGSVVSKDITTEKIYRKVESVKPINHSQVPGS 653
S+VS D+ TE+ KV++V+P +HS PG+
Sbjct: 626 ---DSLVSSDVFTERKNYKVDTVRP-SHS-APGN 654
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Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356513519|ref|XP_003525461.1| PREDICTED: formin-like protein 20-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|449532645|ref|XP_004173291.1| PREDICTED: formin-like protein 20-like [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|356565119|ref|XP_003550792.1| PREDICTED: formin-like protein 20-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|255547317|ref|XP_002514716.1| conserved hypothetical protein [Ricinus communis] gi|223546320|gb|EEF47822.1| conserved hypothetical protein [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|334302903|sp|Q9FLQ7.3|FH20_ARATH RecName: Full=Formin-like protein 20; Short=AtFH20 gi|332003816|gb|AED91199.1| actin binding protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|297733937|emb|CBI15184.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356519080|ref|XP_003528202.1| PREDICTED: formin-like protein 20-like [Glycine max] | Back alignment and taxonomy information |
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| >gi|359491311|ref|XP_002281720.2| PREDICTED: formin-like protein 6-like [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356507105|ref|XP_003522311.1| PREDICTED: formin-like protein 20-like [Glycine max] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1135 | ||||||
| TAIR|locus:2034471 | 1230 | AFH14 "Formin Homology 14" [Ar | 0.311 | 0.286 | 0.451 | 8e-177 | |
| TAIR|locus:2160329 | 722 | AT5G07770 [Arabidopsis thalian | 0.098 | 0.155 | 0.612 | 3e-51 | |
| TAIR|locus:2177801 | 464 | FH19 "formin homolog 19" [Arab | 0.125 | 0.306 | 0.482 | 4.1e-45 | |
| TAIR|locus:2009869 | 299 | AT1G42980 "AT1G42980" [Arabido | 0.059 | 0.224 | 0.588 | 4.5e-22 | |
| ZFIN|ZDB-GENE-030131-1571 | 992 | fmnl3 "formin-like 3" [Danio r | 0.068 | 0.078 | 0.417 | 6.9e-18 | |
| UNIPROTKB|I3LNJ2 | 995 | FMNL2 "Uncharacterized protein | 0.068 | 0.078 | 0.392 | 2.6e-17 | |
| MGI|MGI:1923691 | 1115 | Daam2 "dishevelled associated | 0.127 | 0.130 | 0.292 | 6.3e-17 | |
| DICTYBASE|DDB_G0285589 | 1087 | forH "formin H" [Dictyostelium | 0.089 | 0.093 | 0.311 | 5.6e-16 | |
| UNIPROTKB|I3LDA1 | 1046 | FMNL2 "Uncharacterized protein | 0.068 | 0.074 | 0.392 | 1.5e-15 | |
| UNIPROTKB|F1RQH3 | 1047 | FMNL2 "Uncharacterized protein | 0.068 | 0.074 | 0.392 | 1.5e-15 |
| TAIR|locus:2034471 AFH14 "Formin Homology 14" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 865 (309.6 bits), Expect = 8.0e-177, Sum P(6) = 8.0e-177
Identities = 162/359 (45%), Positives = 244/359 (67%)
Query: 1 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDDYKSYMGGIVAQLQDHFPDASF 60
M+L RFFY++PPD LLE ++RVYVFD CF T+VL + Y+ ++ ++ L + FP++SF
Sbjct: 1 MSLLSRFFYKRPPDGLLEFADRVYVFDSCFCTEVLADSLYQIFLHEVINDLHEEFPESSF 60
Query: 61 MVFNFREGEKRSQISDILSQYDMTVMDYPREYEHCPLLPLEMIHHFLRSSESWLSLEGQQ 120
+ FNFREGEK+S ++ L +YD+TV++YPR+YE CP+LPL +I HFLR ESWL+ +Q
Sbjct: 61 LAFNFREGEKKSVFAETLCEYDVTVLEYPRQYEGCPMLPLSLIQHFLRVCESWLARGNRQ 120
Query: 121 NVLLMHCERGGWPVLAFMLAGLLLYRKQYTGELKTLEMVYKQAPREXXXXXXXXXXXXXX 180
+V+L+HCERGGWP+LAF+LA L++RK ++GE +TLE+V+++AP+
Sbjct: 121 DVILLHCERGGWPLLAFILASFLIFRKVHSGERRTLEIVHREAPKGLLQLLSPLNPFPSQ 180
Query: 181 XRYLQYISRRNLGSDWPPSDTPLLLNCLILRVLPIYGG-NGCRPVIRVYGQDSKIPANRS 239
RYLQY++RRN+ S+WPP + L L+C+I+R +P + +GCRP+IR++G++ + S
Sbjct: 181 LRYLQYVARRNINSEWPPPERALSLDCVIIRGIPNFDSQHGCRPIIRIFGRNYSSKSGLS 240
Query: 240 SKLLFSTFKFKTNVRHYLQDECALVKIDIYCRVQGDVVIECVHLEDDLVREEMMFRVMFH 299
+++++S K +RHY Q EC ++KIDI C VQGDVV+ECVH++ D RE MMFRVMF+
Sbjct: 241 TEMVYSMSDKKKPLRHYRQAECDVIKIDIQCWVQGDVVLECVHMDLDPEREVMMFRVMFN 300
Query: 300 TAFVLFSDADAVVPNLTTVAAVEDGVETESASPEEFFEVE-----EIFSNVVDGQEAKG 353
TAF+ + NL + +D + F EVE ++ + +V+G E G
Sbjct: 301 TAFIRSNILMLNSDNLDILWEAKDHYPKGFRAEVLFGEVENASPQKVPTPIVNGDETGG 359
|
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| TAIR|locus:2160329 AT5G07770 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2177801 FH19 "formin homolog 19" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2009869 AT1G42980 "AT1G42980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| ZFIN|ZDB-GENE-030131-1571 fmnl3 "formin-like 3" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
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| UNIPROTKB|I3LNJ2 FMNL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
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| MGI|MGI:1923691 Daam2 "dishevelled associated activator of morphogenesis 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0285589 forH "formin H" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|I3LDA1 FMNL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1RQH3 FMNL2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1135 | |||
| pfam02181 | 372 | pfam02181, FH2, Formin Homology 2 Domain | 7e-75 | |
| smart00498 | 392 | smart00498, FH2, Formin Homology 2 Domain | 2e-49 | |
| pfam10409 | 129 | pfam10409, PTEN_C2, C2 domain of PTEN tumour-suppr | 5e-22 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 1e-21 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 3e-21 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 1e-14 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 3e-14 | |
| PRK12323 | 700 | PRK12323, PRK12323, DNA polymerase III subunits ga | 3e-14 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 1e-13 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 7e-13 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 8e-13 | |
| pfam06346 | 160 | pfam06346, Drf_FH1, Formin Homology Region 1 | 2e-12 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 5e-12 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 6e-12 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 7e-12 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 1e-11 | |
| pfam07223 | 357 | pfam07223, DUF1421, Protein of unknown function (D | 1e-10 | |
| pfam09770 | 804 | pfam09770, PAT1, Topoisomerase II-associated prote | 1e-10 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 2e-10 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 2e-10 | |
| pfam07223 | 357 | pfam07223, DUF1421, Protein of unknown function (D | 2e-10 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 3e-10 | |
| PRK12323 | 700 | PRK12323, PRK12323, DNA polymerase III subunits ga | 1e-09 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 2e-09 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 2e-09 | |
| PRK07003 | 830 | PRK07003, PRK07003, DNA polymerase III subunits ga | 9e-09 | |
| PHA03378 | 991 | PHA03378, PHA03378, EBNA-3B; Provisional | 1e-08 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 2e-08 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 3e-08 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 4e-08 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 9e-08 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 1e-07 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 2e-07 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 2e-07 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 2e-07 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 2e-07 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 2e-07 | |
| PRK07003 | 830 | PRK07003, PRK07003, DNA polymerase III subunits ga | 2e-07 | |
| PRK14950 | 585 | PRK14950, PRK14950, DNA polymerase III subunits ga | 2e-07 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 4e-07 | |
| PRK14086 | 617 | PRK14086, dnaA, chromosomal replication initiation | 4e-07 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 5e-07 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 7e-07 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 9e-07 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 1e-06 | |
| PRK12323 | 700 | PRK12323, PRK12323, DNA polymerase III subunits ga | 1e-06 | |
| PRK07003 | 830 | PRK07003, PRK07003, DNA polymerase III subunits ga | 1e-06 | |
| pfam05518 | 753 | pfam05518, Totivirus_coat, Totivirus coat protein | 1e-06 | |
| PRK07994 | 647 | PRK07994, PRK07994, DNA polymerase III subunits ga | 1e-06 | |
| PHA03378 | 991 | PHA03378, PHA03378, EBNA-3B; Provisional | 2e-06 | |
| PRK14950 | 585 | PRK14950, PRK14950, DNA polymerase III subunits ga | 2e-06 | |
| pfam07174 | 297 | pfam07174, FAP, Fibronectin-attachment protein (FA | 2e-06 | |
| PRK12323 | 700 | PRK12323, PRK12323, DNA polymerase III subunits ga | 3e-06 | |
| PRK07003 | 830 | PRK07003, PRK07003, DNA polymerase III subunits ga | 5e-06 | |
| PRK07994 | 647 | PRK07994, PRK07994, DNA polymerase III subunits ga | 5e-06 | |
| pfam08580 | 626 | pfam08580, KAR9, Yeast cortical protein KAR9 | 5e-06 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 6e-06 | |
| pfam07174 | 297 | pfam07174, FAP, Fibronectin-attachment protein (FA | 6e-06 | |
| pfam03251 | 458 | pfam03251, Tymo_45kd_70kd, Tymovirus 45/70Kd prote | 6e-06 | |
| PRK12270 | 1228 | PRK12270, kgd, alpha-ketoglutarate decarboxylase; | 6e-06 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 7e-06 | |
| PHA03291 | 401 | PHA03291, PHA03291, envelope glycoprotein I; Provi | 8e-06 | |
| PHA03378 | 991 | PHA03378, PHA03378, EBNA-3B; Provisional | 9e-06 | |
| PRK10263 | 1355 | PRK10263, PRK10263, DNA translocase FtsK; Provisio | 9e-06 | |
| PHA03247 | 3151 | PHA03247, PHA03247, large tegument protein UL36; P | 1e-05 | |
| pfam06346 | 160 | pfam06346, Drf_FH1, Formin Homology Region 1 | 1e-05 | |
| PRK14950 | 585 | PRK14950, PRK14950, DNA polymerase III subunits ga | 1e-05 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 1e-05 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 1e-05 | |
| pfam05109 | 830 | pfam05109, Herpes_BLLF1, Herpes virus major outer | 1e-05 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 2e-05 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 2e-05 | |
| PRK12270 | 1228 | PRK12270, kgd, alpha-ketoglutarate decarboxylase; | 2e-05 | |
| PRK07764 | 824 | PRK07764, PRK07764, DNA polymerase III subunits ga | 3e-05 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 3e-05 | |
| PHA03201 | 318 | PHA03201, PHA03201, uracil DNA glycosylase; Provis | 3e-05 | |
| PTZ00449 | 943 | PTZ00449, PTZ00449, 104 kDa microneme/rhoptry anti | 3e-05 | |
| pfam04652 | 315 | pfam04652, DUF605, Vta1 like | 4e-05 | |
| pfam05518 | 753 | pfam05518, Totivirus_coat, Totivirus coat protein | 4e-05 | |
| pfam03276 | 582 | pfam03276, Gag_spuma, Spumavirus gag protein | 4e-05 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 5e-05 | |
| pfam09770 | 804 | pfam09770, PAT1, Topoisomerase II-associated prote | 5e-05 | |
| PRK14950 | 585 | PRK14950, PRK14950, DNA polymerase III subunits ga | 5e-05 | |
| pfam09770 | 804 | pfam09770, PAT1, Topoisomerase II-associated prote | 7e-05 | |
| PRK10263 | 1355 | PRK10263, PRK10263, DNA translocase FtsK; Provisio | 7e-05 | |
| PRK14950 | 585 | PRK14950, PRK14950, DNA polymerase III subunits ga | 8e-05 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 1e-04 | |
| pfam12737 | 418 | pfam12737, Mating_C, C-terminal domain of homeodom | 1e-04 | |
| PHA03307 | 1352 | PHA03307, PHA03307, transcriptional regulator ICP4 | 2e-04 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 2e-04 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 2e-04 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 2e-04 | |
| pfam03276 | 582 | pfam03276, Gag_spuma, Spumavirus gag protein | 2e-04 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 2e-04 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 2e-04 | |
| PRK10672 | 361 | PRK10672, PRK10672, rare lipoprotein A; Provisiona | 2e-04 | |
| PRK10856 | 331 | PRK10856, PRK10856, cytoskeletal protein RodZ; Pro | 2e-04 | |
| PHA03201 | 318 | PHA03201, PHA03201, uracil DNA glycosylase; Provis | 3e-04 | |
| pfam03276 | 582 | pfam03276, Gag_spuma, Spumavirus gag protein | 3e-04 | |
| PRK13406 | 584 | PRK13406, bchD, magnesium chelatase subunit D; Pro | 3e-04 | |
| PRK07994 | 647 | PRK07994, PRK07994, DNA polymerase III subunits ga | 4e-04 | |
| pfam06070 | 777 | pfam06070, Herpes_UL32, Herpesvirus large structur | 4e-04 | |
| PRK12270 | 1228 | PRK12270, kgd, alpha-ketoglutarate decarboxylase; | 5e-04 | |
| PHA03418 | 230 | PHA03418, PHA03418, hypothetical E4 protein; Provi | 6e-04 | |
| smart00818 | 165 | smart00818, Amelogenin, Amelogenins, cell adhesion | 7e-04 | |
| pfam05110 | 1154 | pfam05110, AF-4, AF-4 proto-oncoprotein | 8e-04 | |
| PRK06995 | 484 | PRK06995, flhF, flagellar biosynthesis regulator F | 8e-04 | |
| pfam07223 | 357 | pfam07223, DUF1421, Protein of unknown function (D | 0.001 | |
| PHA03378 | 991 | PHA03378, PHA03378, EBNA-3B; Provisional | 0.001 | |
| PRK12270 | 1228 | PRK12270, kgd, alpha-ketoglutarate decarboxylase; | 0.001 | |
| PHA03291 | 401 | PHA03291, PHA03291, envelope glycoprotein I; Provi | 0.001 | |
| PRK14666 | 694 | PRK14666, uvrC, excinuclease ABC subunit C; Provis | 0.001 | |
| COG5178 | 2365 | COG5178, PRP8, U5 snRNP spliceosome subunit [RNA p | 0.001 | |
| PHA03378 | 991 | PHA03378, PHA03378, EBNA-3B; Provisional | 0.002 | |
| PRK07994 | 647 | PRK07994, PRK07994, DNA polymerase III subunits ga | 0.002 | |
| pfam07174 | 297 | pfam07174, FAP, Fibronectin-attachment protein (FA | 0.002 | |
| PRK14948 | 620 | PRK14948, PRK14948, DNA polymerase III subunits ga | 0.002 | |
| PHA02682 | 280 | PHA02682, PHA02682, ORF080 virion core protein; Pr | 0.002 | |
| pfam12526 | 115 | pfam12526, DUF3729, Protein of unknown function (D | 0.002 | |
| PRK12438 | 991 | PRK12438, PRK12438, hypothetical protein; Provisio | 0.002 | |
| COG5178 | 2365 | COG5178, PRP8, U5 snRNP spliceosome subunit [RNA p | 0.003 | |
| pfam12868 | 135 | pfam12868, DUF3824, Domain of unknwon function (DU | 0.003 | |
| PRK12799 | 421 | PRK12799, motB, flagellar motor protein MotB; Revi | 0.003 | |
| PRK14971 | 614 | PRK14971, PRK14971, DNA polymerase III subunits ga | 0.003 | |
| pfam06003 | 264 | pfam06003, SMN, Survival motor neuron protein (SMN | 0.003 | |
| pfam06346 | 160 | pfam06346, Drf_FH1, Formin Homology Region 1 | 0.004 | |
| PRK14951 | 618 | PRK14951, PRK14951, DNA polymerase III subunits ga | 0.004 | |
| PRK07003 | 830 | PRK07003, PRK07003, DNA polymerase III subunits ga | 0.004 | |
| pfam12526 | 115 | pfam12526, DUF3729, Protein of unknown function (D | 0.004 | |
| pfam01044 | 850 | pfam01044, Vinculin, Vinculin family | 0.004 | |
| PRK12727 | 559 | PRK12727, PRK12727, flagellar biosynthesis regulat | 0.004 |
| >gnl|CDD|216919 pfam02181, FH2, Formin Homology 2 Domain | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 7e-75
Identities = 99/328 (30%), Positives = 159/328 (48%), Gaps = 78/328 (23%)
Query: 838 TASAPPPPKGRGLTRATAMAPRRSSLKPLHWSKIDLRRANNTEIMLTKVKMPLPDMMVAV 897
+ K ++ + S+ +D +R+ N I+L K+K+P +++ A+
Sbjct: 52 AKAKKKKSKKSEKKSSSKKKKKEISV-------LDPKRSQNIAILLRKLKLPPEEIVQAI 104
Query: 898 LAMDESVLDVDQVENLIKFCPTKEEMELLKNYTGDKENLGKCEQ---------------- 941
L MDESVL ++ +ENL+K PTKEE++ LK Y GD LG+ EQ
Sbjct: 105 LEMDESVLGLELLENLLKMAPTKEELKKLKEYKGDPSKLGRAEQFLLELSKIPRLEERLE 164
Query: 942 -----------ISEFRKNLNTVNSACEEVRNSIKLKEIMKKILYLGNTLNQGTARGSAVG 990
+ E + +L T+ +A EE+R S K K++++ IL LGN +N GT RG+A G
Sbjct: 165 ALLFKSTFEEEVEELKPSLETLEAASEELRESRKFKKLLELILALGNYMNSGTRRGNAKG 224
Query: 991 FKLDSLLKLTDTRASNSKMTLMHYLC------------------------KIQLKSLAEE 1026
FKL SLLKL+DT+++++K TL+HYL K+ L+ L ++
Sbjct: 225 FKLSSLLKLSDTKSTDNKTTLLHYLVKIIREKLPDLLDFSSELSHVEKAAKVDLEQLEKD 284
Query: 1027 MQAIIKGLEKT--------------------LKGFISVAEVEVASVTNLYSVAGRNADAL 1066
++ + KGL+K +K F+ AE ++ + +L A L
Sbjct: 285 VKELEKGLKKLERELELSALDEHPDDKFVEKMKEFLEEAEEKLDKLESLLKEAMELFKEL 344
Query: 1067 ALYFGEDPARCPFEQVTATLLNFVRLFR 1094
YFGEDP E+ L +F+R+F+
Sbjct: 345 TEYFGEDPKETSPEEFFKILRDFLRMFK 372
|
Length = 372 |
| >gnl|CDD|214697 smart00498, FH2, Formin Homology 2 Domain | Back alignment and domain information |
|---|
| >gnl|CDD|220736 pfam10409, PTEN_C2, C2 domain of PTEN tumour-suppressor protein | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|148139 pfam06346, Drf_FH1, Formin Homology Region 1 | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219339 pfam07223, DUF1421, Protein of unknown function (DUF1421) | Back alignment and domain information |
|---|
| >gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1 | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219339 pfam07223, DUF1421, Protein of unknown function (DUF1421) | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
| >gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
| >gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237605 PRK14086, dnaA, chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|218621 pfam05518, Totivirus_coat, Totivirus coat protein | Back alignment and domain information |
|---|
| >gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219321 pfam07174, FAP, Fibronectin-attachment protein (FAP) | Back alignment and domain information |
|---|
| >gnl|CDD|237057 PRK12323, PRK12323, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|219916 pfam08580, KAR9, Yeast cortical protein KAR9 | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|219321 pfam07174, FAP, Fibronectin-attachment protein (FAP) | Back alignment and domain information |
|---|
| >gnl|CDD|217453 pfam03251, Tymo_45kd_70kd, Tymovirus 45/70Kd protein | Back alignment and domain information |
|---|
| >gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|223033 PHA03291, PHA03291, envelope glycoprotein I; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236669 PRK10263, PRK10263, DNA translocase FtsK; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|223021 PHA03247, PHA03247, large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|148139 pfam06346, Drf_FH1, Formin Homology Region 1 | Back alignment and domain information |
|---|
| >gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218439 pfam05109, Herpes_BLLF1, Herpes virus major outer envelope glycoprotein (BLLF1) | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|236090 PRK07764, PRK07764, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|165468 PHA03201, PHA03201, uracil DNA glycosylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|185628 PTZ00449, PTZ00449, 104 kDa microneme/rhoptry antigen; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|218191 pfam04652, DUF605, Vta1 like | Back alignment and domain information |
|---|
| >gnl|CDD|218621 pfam05518, Totivirus_coat, Totivirus coat protein | Back alignment and domain information |
|---|
| >gnl|CDD|217469 pfam03276, Gag_spuma, Spumavirus gag protein | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1 | Back alignment and domain information |
|---|
| >gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|220392 pfam09770, PAT1, Topoisomerase II-associated protein PAT1 | Back alignment and domain information |
|---|
| >gnl|CDD|236669 PRK10263, PRK10263, DNA translocase FtsK; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237864 PRK14950, PRK14950, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|221745 pfam12737, Mating_C, C-terminal domain of homeodomain 1 | Back alignment and domain information |
|---|
| >gnl|CDD|223039 PHA03307, PHA03307, transcriptional regulator ICP4; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217469 pfam03276, Gag_spuma, Spumavirus gag protein | Back alignment and domain information |
|---|
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236733 PRK10672, PRK10672, rare lipoprotein A; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236776 PRK10856, PRK10856, cytoskeletal protein RodZ; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|165468 PHA03201, PHA03201, uracil DNA glycosylase; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|217469 pfam03276, Gag_spuma, Spumavirus gag protein | Back alignment and domain information |
|---|
| >gnl|CDD|237378 PRK13406, bchD, magnesium chelatase subunit D; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|218881 pfam06070, Herpes_UL32, Herpesvirus large structural phosphoprotein UL32 | Back alignment and domain information |
|---|
| >gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|177646 PHA03418, PHA03418, hypothetical E4 protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|197891 smart00818, Amelogenin, Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth | Back alignment and domain information |
|---|
| >gnl|CDD|218440 pfam05110, AF-4, AF-4 proto-oncoprotein | Back alignment and domain information |
|---|
| >gnl|CDD|235904 PRK06995, flhF, flagellar biosynthesis regulator FlhF; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|219339 pfam07223, DUF1421, Protein of unknown function (DUF1421) | Back alignment and domain information |
|---|
| >gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237030 PRK12270, kgd, alpha-ketoglutarate decarboxylase; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|223033 PHA03291, PHA03291, envelope glycoprotein I; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|237782 PRK14666, uvrC, excinuclease ABC subunit C; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227505 COG5178, PRP8, U5 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >gnl|CDD|223065 PHA03378, PHA03378, EBNA-3B; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|236138 PRK07994, PRK07994, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|219321 pfam07174, FAP, Fibronectin-attachment protein (FAP) | Back alignment and domain information |
|---|
| >gnl|CDD|237862 PRK14948, PRK14948, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|177464 PHA02682, PHA02682, ORF080 virion core protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|152960 pfam12526, DUF3729, Protein of unknown function (DUF3729) | Back alignment and domain information |
|---|
| >gnl|CDD|171499 PRK12438, PRK12438, hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|227505 COG5178, PRP8, U5 snRNP spliceosome subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >gnl|CDD|221818 pfam12868, DUF3824, Domain of unknwon function (DUF3824) | Back alignment and domain information |
|---|
| >gnl|CDD|183756 PRK12799, motB, flagellar motor protein MotB; Reviewed | Back alignment and domain information |
|---|
| >gnl|CDD|237874 PRK14971, PRK14971, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|114709 pfam06003, SMN, Survival motor neuron protein (SMN) | Back alignment and domain information |
|---|
| >gnl|CDD|148139 pfam06346, Drf_FH1, Formin Homology Region 1 | Back alignment and domain information |
|---|
| >gnl|CDD|237865 PRK14951, PRK14951, DNA polymerase III subunits gamma and tau; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|235906 PRK07003, PRK07003, DNA polymerase III subunits gamma and tau; Validated | Back alignment and domain information |
|---|
| >gnl|CDD|152960 pfam12526, DUF3729, Protein of unknown function (DUF3729) | Back alignment and domain information |
|---|
| >gnl|CDD|216263 pfam01044, Vinculin, Vinculin family | Back alignment and domain information |
|---|
| >gnl|CDD|237182 PRK12727, PRK12727, flagellar biosynthesis regulator FlhF; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1135 | |||
| KOG2283 | 434 | consensus Clathrin coat dissociation kinase GAK/PT | 100.0 | |
| KOG1924 | 1102 | consensus RhoA GTPase effector DIA/Diaphanous [Sig | 100.0 | |
| smart00498 | 432 | FH2 Formin Homology 2 Domain. FH proteins control | 100.0 | |
| PF02181 | 370 | FH2: Formin Homology 2 Domain; InterPro: IPR015425 | 100.0 | |
| KOG1923 | 830 | consensus Rac1 GTPase effector FRL [Signal transdu | 100.0 | |
| KOG1925 | 817 | consensus Rac1 GTPase effector FHOS [Signal transd | 99.97 | |
| KOG1922 | 833 | consensus Rho GTPase effector BNI1 and related for | 99.97 | |
| PF10409 | 134 | PTEN_C2: C2 domain of PTEN tumour-suppressor prote | 99.88 | |
| PTZ00242 | 166 | protein tyrosine phosphatase; Provisional | 99.57 | |
| PTZ00393 | 241 | protein tyrosine phosphatase; Provisional | 99.38 | |
| KOG1924 | 1102 | consensus RhoA GTPase effector DIA/Diaphanous [Sig | 99.27 | |
| KOG1720 | 225 | consensus Protein tyrosine phosphatase CDC14 [Defe | 99.25 | |
| PF05706 | 168 | CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3) | 99.0 | |
| PHA03247 | 3151 | large tegument protein UL36; Provisional | 98.99 | |
| smart00195 | 138 | DSPc Dual specificity phosphatase, catalytic domai | 98.92 | |
| PHA03247 | 3151 | large tegument protein UL36; Provisional | 98.87 | |
| COG2453 | 180 | CDC14 Predicted protein-tyrosine phosphatase [Sign | 98.8 | |
| PF00782 | 133 | DSPc: Dual specificity phosphatase, catalytic doma | 98.75 | |
| PRK12361 | 547 | hypothetical protein; Provisional | 98.69 | |
| cd00127 | 139 | DSPc Dual specificity phosphatases (DSP); Ser/Thr | 98.6 | |
| smart00012 | 105 | PTPc_DSPc Protein tyrosine phosphatase, catalytic | 98.56 | |
| smart00404 | 105 | PTPc_motif Protein tyrosine phosphatase, catalytic | 98.56 | |
| KOG1719 | 183 | consensus Dual specificity phosphatase [Defense me | 98.45 | |
| KOG3671 | 569 | consensus Actin regulatory protein (Wiskott-Aldric | 98.26 | |
| KOG3671 | 569 | consensus Actin regulatory protein (Wiskott-Aldric | 98.19 | |
| KOG2836 | 173 | consensus Protein tyrosine phosphatase IVA1 [Signa | 98.16 | |
| cd00047 | 231 | PTPc Protein tyrosine phosphatases (PTP) catalyze | 97.93 | |
| PRK15375 | 535 | pathogenicity island 1 effector protein StpP; Prov | 97.77 | |
| smart00194 | 258 | PTPc Protein tyrosine phosphatase, catalytic domai | 97.65 | |
| PF00102 | 235 | Y_phosphatase: Protein-tyrosine phosphatase; Inter | 97.49 | |
| KOG0792 | 1144 | consensus Protein tyrosine phosphatase PTPMEG, con | 97.36 | |
| PF03162 | 164 | Y_phosphatase2: Tyrosine phosphatase family; Inter | 97.34 | |
| KOG2386 | 393 | consensus mRNA capping enzyme, guanylyltransferase | 96.87 | |
| KOG1830 | 518 | consensus Wiskott Aldrich syndrome proteins [Cytos | 96.79 | |
| PHA02747 | 312 | protein tyrosine phosphatase; Provisional | 96.72 | |
| PLN02727 | 986 | NAD kinase | 96.53 | |
| KOG1830 | 518 | consensus Wiskott Aldrich syndrome proteins [Cytos | 96.48 | |
| KOG0790 | 600 | consensus Protein tyrosine phosphatase Corkscrew a | 96.44 | |
| PHA02740 | 298 | protein tyrosine phosphatase; Provisional | 96.34 | |
| PHA02742 | 303 | protein tyrosine phosphatase; Provisional | 96.3 | |
| KOG1716 | 285 | consensus Dual specificity phosphatase [Defense me | 96.19 | |
| PHA02738 | 320 | hypothetical protein; Provisional | 96.12 | |
| PHA02746 | 323 | protein tyrosine phosphatase; Provisional | 96.11 | |
| TIGR01244 | 135 | conserved hypothetical protein TIGR01244. No membe | 95.98 | |
| PF13350 | 164 | Y_phosphatase3: Tyrosine phosphatase family; PDB: | 95.69 | |
| KOG0791 | 374 | consensus Protein tyrosine phosphatase, contains f | 95.56 | |
| PF14566 | 149 | PTPlike_phytase: Inositol hexakisphosphate; PDB: 1 | 95.06 | |
| COG5599 | 302 | PTP2 Protein tyrosine phosphatase [Signal transduc | 94.73 | |
| KOG1572 | 249 | consensus Predicted protein tyrosine phosphatase [ | 93.26 | |
| COG2365 | 249 | Protein tyrosine/serine phosphatase [Signal transd | 92.77 | |
| KOG4228 | 1087 | consensus Protein tyrosine phosphatase [Signal tra | 92.59 | |
| KOG1717 | 343 | consensus Dual specificity phosphatase [Defense me | 92.38 | |
| KOG0789 | 415 | consensus Protein tyrosine phosphatase [Signal tra | 91.92 | |
| KOG1923 | 830 | consensus Rac1 GTPase effector FRL [Signal transdu | 91.12 | |
| KOG0994 | 1758 | consensus Extracellular matrix glycoprotein Lamini | 89.66 | |
| KOG1718 | 198 | consensus Dual specificity phosphatase [Defense me | 89.39 | |
| PF04273 | 110 | DUF442: Putative phosphatase (DUF442); InterPro: I | 88.23 | |
| PF14671 | 141 | DSPn: Dual specificity protein phosphatase, N-term | 87.93 | |
| KOG0793 | 1004 | consensus Protein tyrosine phosphatase [Signal tra | 87.38 | |
| KOG2002 | 1018 | consensus TPR-containing nuclear phosphoprotein th | 86.95 | |
| KOG4228 | 1087 | consensus Protein tyrosine phosphatase [Signal tra | 86.27 | |
| PF12325 | 120 | TMF_TATA_bd: TATA element modulatory factor 1 TATA | 85.01 | |
| KOG4302 | 660 | consensus Microtubule-associated protein essential | 84.94 | |
| PF10147 | 217 | CR6_interact: Growth arrest and DNA-damage-inducib | 83.6 | |
| PLN00047 | 283 | photosystem II biogenesis protein Psb29; Provision | 81.44 |
| >KOG2283 consensus Clathrin coat dissociation kinase GAK/PTEN/Auxilin and related tyrosine phosphatases [Signal transduction mechanisms; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-57 Score=522.82 Aligned_cols=268 Identities=25% Similarity=0.379 Sum_probs=230.6
Q ss_pred hhhhccCCCCCCeeeecCceEEeecCCCCCCCchhhhcccHHHHHHHHhhhCCCCcEEEEEecc-CCccccccccccccC
Q 001156 4 FRRFFYRKPPDRLLEISERVYVFDCCFSTDVLEEDDYKSYMGGIVAQLQDHFPDASFMVFNFRE-GEKRSQISDILSQYD 82 (1135)
Q Consensus 4 ~rr~~~~~~~lDLtyIT~RIiam~~~fP~~~~~e~~yrn~i~~V~~~L~~~h~~~~y~V~NLs~-~~~~s~~~~~~~~f~ 82 (1135)
-||+.+++.||||+|||+||||| +||++++ |+.|||+|++|+.||+++|++| |+|||||. +.|+ .++|+
T Consensus 3 k~r~~~~~~DLDltYIT~rIIam--sfPa~~~-es~yRN~l~dV~~fL~s~H~~~-y~vyNL~~er~yd------~~~f~ 72 (434)
T KOG2283|consen 3 KRRYNEGGFDLDLTYITSRIIAM--SFPAEGI-ESLYRNNLEDVVLFLDSKHKDH-YKVYNLSSERLYD------PSRFH 72 (434)
T ss_pred cchhhhccccccceeeeeeEEEE--eCCCCcc-hhhhcCCHHHHHHHHhhccCCc-eEEEecCccccCC------ccccc
Confidence 47999999999999999999999 8999999 8899999999999999999985 99999994 4454 56899
Q ss_pred CeeecCCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCCcCchhhHHHHHHHHhhccCCHHHHHHHHHHh
Q 001156 83 MTVMDYPREYEHCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGELKTLEMVYKQ 162 (1135)
Q Consensus 83 ~~V~~~p~~~~~~p~p~L~~l~~~c~~~~~wL~~~d~~NVvviHCk~Gk~grtg~~iaa~L~y~~~~~~~~~al~~~~~~ 162 (1135)
++|..|+|+|||+| +|++|+.||++|++||++ |++||||||||+|+ ||||+||||||+|++++.++++||++|.
T Consensus 73 g~V~~~~~~Dh~~P--~L~~l~~~c~~~~~WL~~-d~~nVvvvHCk~Gk-grtg~~icA~L~~~~~~~ta~eald~~~-- 146 (434)
T KOG2283|consen 73 GRVARFGFDDHNPP--PLELLCPFCKSMDNWLSE-DPKNVVVVHCKAGK-GRTGVMICAYLIYSGISATAEEALDYFN-- 146 (434)
T ss_pred cceeecCCCCCCCC--cHHHHHHHHHCHHHHHhc-CccceEEEEccCCC-cceEEEEeHHHHhhhhcCCHHHHHHHHh--
Confidence 99999999999887 999999999999999999 99999999999999 7999999999999999999999999984
Q ss_pred cchhhhccCCCCCCCchHHHHHHHHHHhccCCCCCCCCC--ceEEEEEEEEcccC--CCCCCceeEEEEEecCCCCCCCC
Q 001156 163 APRELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPSDT--PLLLNCLILRVLPI--YGGNGCRPVIRVYGQDSKIPANR 238 (1135)
Q Consensus 163 ~~~~~~~~~~~~~~~PSQ~RYv~Yf~~ll~~~~~~p~~~--~l~L~~iil~~iP~--~~~~gcrP~~~Iy~~~~~~~~~~ 238 (1135)
++||..+...++++|||+|||+||++++.....+++.+ +++|++++|..||+ ..++||++++.||+..
T Consensus 147 -~kR~~~~~~~~~~~PSq~RYv~Y~~~~l~~~~~~~~~~~~~~f~~~~~~~~ip~~~~~~~~~~~~~~v~~~k------- 218 (434)
T KOG2283|consen 147 -EKRFDEGKSKGVTIPSQRRYVGYFSRVLLNGPLPPRSNSCPLFLHSFILISIPNFNSSRDGCRPAFPVYQGK------- 218 (434)
T ss_pred -hhhccccccCCccCchhhHHHHHHHHHhhcCCcCcccccCceEeeeeeeeecCcccccCCCCCccceeeecc-------
Confidence 33455554455689999999999999444333456777 99999999999997 7889999999999986
Q ss_pred CCceEEeccccccccccccccceEEEEecccceeecCeEEEEEeccccccc-------cceEEEEEecccccc
Q 001156 239 SSKLLFSTFKFKTNVRHYLQDECALVKIDIYCRVQGDVVIECVHLEDDLVR-------EEMMFRVMFHTAFVL 304 (1135)
Q Consensus 239 ~~~~v~ss~~~~~~~~~y~~~d~~~i~~~~~~~v~GDV~i~~~h~~~~~~~-------~~~mFr~~FnT~Fi~ 304 (1135)
+.+|++..+. .++.|.. + ++|+|+.++.++ ++|||.+...+. +..+|.++|||+++.
T Consensus 219 --~~~~~~~s~~-~~~~~~~-~-g~~~i~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (434)
T KOG2283|consen 219 --KKVYSFSSDG-IMRLGEL-D-GKIVIPLGLRVD----VKCYHKRTSSGNRGILKDKEFKGCQIQFYTGPFP 282 (434)
T ss_pred --eeeEEeccCC-ccccccc-c-cceecccccccc----eEEEeeccccCCcceeeccccceEEEeccCCCcc
Confidence 5677777666 6777766 4 578899888888 999999765544 344666677777643
|
|
| >KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >smart00498 FH2 Formin Homology 2 Domain | Back alignment and domain information |
|---|
| >PF02181 FH2: Formin Homology 2 Domain; InterPro: IPR015425 Formin homology (FH) proteins play a crucial role in the reorganisation of the actin cytoskeleton, which mediates various functions of the cell cortex including motility, adhesion, and cytokinesis [] | Back alignment and domain information |
|---|
| >KOG1923 consensus Rac1 GTPase effector FRL [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1925 consensus Rac1 GTPase effector FHOS [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1922 consensus Rho GTPase effector BNI1 and related formins [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF10409 PTEN_C2: C2 domain of PTEN tumour-suppressor protein; InterPro: IPR014020 Tensins constitute an eukaryotic family of lipid phosphatases that are defined by the presence of two adjacent domains: a lipid phosphatase domain and a C2-like domain | Back alignment and domain information |
|---|
| >PTZ00242 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PTZ00393 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >KOG1924 consensus RhoA GTPase effector DIA/Diaphanous [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG1720 consensus Protein tyrosine phosphatase CDC14 [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF05706 CDKN3: Cyclin-dependent kinase inhibitor 3 (CDKN3); InterPro: IPR022778 This entry represents a domain found in cyclin-dependent kinase inhibitor 3 or kinase associated phosphatase proteins from several mammalian species | Back alignment and domain information |
|---|
| >PHA03247 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >smart00195 DSPc Dual specificity phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >PHA03247 large tegument protein UL36; Provisional | Back alignment and domain information |
|---|
| >COG2453 CDC14 Predicted protein-tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >PRK12361 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases | Back alignment and domain information |
|---|
| >smart00012 PTPc_DSPc Protein tyrosine phosphatase, catalytic domain, undefined specificity | Back alignment and domain information |
|---|
| >smart00404 PTPc_motif Protein tyrosine phosphatase, catalytic domain motif | Back alignment and domain information |
|---|
| >KOG1719 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG3671 consensus Actin regulatory protein (Wiskott-Aldrich syndrome protein) [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG2836 consensus Protein tyrosine phosphatase IVA1 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >cd00047 PTPc Protein tyrosine phosphatases (PTP) catalyze the dephosphorylation of phosphotyrosine peptides; they regulate phosphotyrosine levels in signal transduction pathways | Back alignment and domain information |
|---|
| >PRK15375 pathogenicity island 1 effector protein StpP; Provisional | Back alignment and domain information |
|---|
| >smart00194 PTPc Protein tyrosine phosphatase, catalytic domain | Back alignment and domain information |
|---|
| >PF00102 Y_phosphatase: Protein-tyrosine phosphatase; InterPro: IPR000242 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >KOG0792 consensus Protein tyrosine phosphatase PTPMEG, contains FERM domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity | Back alignment and domain information |
|---|
| >KOG2386 consensus mRNA capping enzyme, guanylyltransferase (alpha) subunit [RNA processing and modification] | Back alignment and domain information |
|---|
| >KOG1830 consensus Wiskott Aldrich syndrome proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >PHA02747 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PLN02727 NAD kinase | Back alignment and domain information |
|---|
| >KOG1830 consensus Wiskott Aldrich syndrome proteins [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0790 consensus Protein tyrosine phosphatase Corkscrew and related SH2 domain enzymes [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PHA02740 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >PHA02742 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >KOG1716 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PHA02738 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >PHA02746 protein tyrosine phosphatase; Provisional | Back alignment and domain information |
|---|
| >TIGR01244 conserved hypothetical protein TIGR01244 | Back alignment and domain information |
|---|
| >PF13350 Y_phosphatase3: Tyrosine phosphatase family; PDB: 1YWF_A 2OZ5_B | Back alignment and domain information |
|---|
| >KOG0791 consensus Protein tyrosine phosphatase, contains fn3 domain [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF14566 PTPlike_phytase: Inositol hexakisphosphate; PDB: 1U24_A 2PSZ_B 3MOZ_A 3D1H_B 2B4P_B 3D1Q_A 2B4O_A 3MMJ_B 1U25_A 1U26_B | Back alignment and domain information |
|---|
| >COG5599 PTP2 Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1572 consensus Predicted protein tyrosine phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >COG2365 Protein tyrosine/serine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1717 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >KOG0789 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG1923 consensus Rac1 GTPase effector FRL [Signal transduction mechanisms; Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures] | Back alignment and domain information |
|---|
| >KOG1718 consensus Dual specificity phosphatase [Defense mechanisms] | Back alignment and domain information |
|---|
| >PF04273 DUF442: Putative phosphatase (DUF442); InterPro: IPR005939 Although this domain is uncharacterised it seems likely that it performs a phosphatase function | Back alignment and domain information |
|---|
| >PF14671 DSPn: Dual specificity protein phosphatase, N-terminal half; PDB: 1OHD_A 1OHE_A 1OHC_A | Back alignment and domain information |
|---|
| >KOG0793 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >KOG2002 consensus TPR-containing nuclear phosphoprotein that regulates K(+) uptake [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
| >KOG4228 consensus Protein tyrosine phosphatase [Signal transduction mechanisms] | Back alignment and domain information |
|---|
| >PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] | Back alignment and domain information |
|---|
| >KOG4302 consensus Microtubule-associated protein essential for anaphase spindle elongation [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton] | Back alignment and domain information |
|---|
| >PF10147 CR6_interact: Growth arrest and DNA-damage-inducible proteins-interacting protein 1; InterPro: IPR018472 Members of this family of proteins act as negative regulators of G1 to S cell cycle phase progression by inhibiting cyclin-dependent kinases | Back alignment and domain information |
|---|
| >PLN00047 photosystem II biogenesis protein Psb29; Provisional | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1135 | ||||
| 2z6e_A | 419 | Crystal Structure Of Human Daam1 Fh2 Length = 419 | 3e-19 | ||
| 2j1d_G | 483 | Crystallization Of Hdaam1 C-Terminal Fragment Lengt | 3e-19 | ||
| 4eah_A | 402 | Crystal Structure Of The Formin Homology 2 Domain O | 7e-19 | ||
| 3o4x_E | 467 | Crystal Structure Of Complex Between Amino And Carb | 1e-17 | ||
| 3obv_E | 457 | Autoinhibited Formin Mdia1 Structure Length = 457 | 2e-17 | ||
| 1v9d_A | 340 | Crystal Structure Of The Core Fh2 Domain Of Mouse M | 3e-17 | ||
| 3n0a_A | 361 | Crystal Structure Of Auxilin (40-400) Length = 361 | 3e-06 | ||
| 1d5r_A | 324 | Crystal Structure Of The Pten Tumor Suppressor Leng | 4e-06 |
| >pdb|2Z6E|A Chain A, Crystal Structure Of Human Daam1 Fh2 Length = 419 | Back alignment and structure |
|
| >pdb|2J1D|G Chain G, Crystallization Of Hdaam1 C-Terminal Fragment Length = 483 | Back alignment and structure |
| >pdb|4EAH|A Chain A, Crystal Structure Of The Formin Homology 2 Domain Of Fmnl3 Bound To Actin Length = 402 | Back alignment and structure |
| >pdb|3O4X|E Chain E, Crystal Structure Of Complex Between Amino And Carboxy Terminal Fragments Of Mdia1 Length = 467 | Back alignment and structure |
| >pdb|3OBV|E Chain E, Autoinhibited Formin Mdia1 Structure Length = 457 | Back alignment and structure |
| >pdb|1V9D|A Chain A, Crystal Structure Of The Core Fh2 Domain Of Mouse Mdia1 Length = 340 | Back alignment and structure |
| >pdb|3N0A|A Chain A, Crystal Structure Of Auxilin (40-400) Length = 361 | Back alignment and structure |
| >pdb|1D5R|A Chain A, Crystal Structure Of The Pten Tumor Suppressor Length = 324 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1 Length = 340 | Back alignment and structure |
|---|
Score = 280 bits (717), Expect = 1e-85
Identities = 74/329 (22%), Positives = 136/329 (41%), Gaps = 71/329 (21%)
Query: 871 IDLRRANNTEIMLTKVKMPLPDMMVAVLAMDESVLDVDQVENLIKFCPTKEEMELLKNYT 930
+D + A N I L +MP ++ +L ++E+VL ++NLIK P E++++L
Sbjct: 12 LDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELK 71
Query: 931 GDKENLGKCEQ---------------------------ISEFRKNLNTVNSACEEVRNSI 963
+ ++L + EQ + + + +V +ACEE+R S
Sbjct: 72 EEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSE 131
Query: 964 KLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLC------- 1016
+++ L +GN +N G+ A GF + L KL DT++++ KMTL+H+L
Sbjct: 132 NFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCENDH 191
Query: 1017 -----------------KIQLKSLAEEMQAIIKGLEK--------------------TLK 1039
++ ++L + + + K + +
Sbjct: 192 PEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEKMT 251
Query: 1040 GFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEE 1099
F+ A+ + + ++S L YF DP + E+ L NF +F +A +E
Sbjct: 252 SFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKE 311
Query: 1100 NVKQSELERKKAEKEAEMEKAKGINLTKK 1128
N K+ E E K + EKA+ L K+
Sbjct: 312 NQKRRETEEKMRRAKLAKEKAEKERLEKQ 340
|
| >3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D Length = 457 | Back alignment and structure |
|---|
| >2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A Length = 483 | Back alignment and structure |
|---|
| >1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A Length = 411 | Back alignment and structure |
|---|
| >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 Length = 324 | Back alignment and structure |
|---|
| >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} Length = 361 | Back alignment and structure |
|---|
| >3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A Length = 339 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 Length = 926 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A Length = 231 | Back alignment and structure |
|---|
| >3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A Length = 231 | Back alignment and structure |
|---|
| >3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A Length = 231 | Back alignment and structure |
|---|
| >3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A Length = 231 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >1twf_A B220, DNA-directed RNA polymerase II largest subunit; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: e.29.1.2 PDB: 1i3q_A 1i6h_A 1k83_A* 1nik_A 1nt9_A 1pqv_A 1r5u_A 1r9s_A* 1r9t_A* 1sfo_A* 1twa_A* 1twc_A* 1i50_A* 1twg_A* 1twh_A* 1wcm_A 1y1v_A 1y1w_A 1y1y_A 1y77_A* ... Length = 1733 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A* Length = 433 | Back alignment and structure |
|---|
| >1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 213 | Back alignment and structure |
|---|
| >1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 213 | Back alignment and structure |
|---|
| >1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 213 | Back alignment and structure |
|---|
| >3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A Length = 937 | Back alignment and structure |
|---|
| >2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A Length = 229 | Back alignment and structure |
|---|
| >2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex, inter-protein beta sheet, protein-protein, metal transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A {Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A Length = 229 | Back alignment and structure |
|---|
| >1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A Length = 219 | Back alignment and structure |
|---|
| >1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A Length = 219 | Back alignment and structure |
|---|
| >1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A Length = 219 | Back alignment and structure |
|---|
| >1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A Length = 219 | Back alignment and structure |
|---|
| >1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A Length = 219 | Back alignment and structure |
|---|
| >1dx0_A Prion protein; brain, repeat; NMR {Bos taurus} SCOP: d.6.1.1 PDB: 1dx1_A 1qlx_A 1qlz_A Length = 219 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3dzy_A Retinoic acid receptor RXR-alpha; DNA-binding, HOST-virus interaction, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc-FIN activator; HET: DNA REA BRL; 3.10A {Homo sapiens} PDB: 3dzu_A* 3e00_A* Length = 467 | Back alignment and structure |
|---|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} Length = 1752 | Back alignment and structure |
|---|
| >3tx7_B Nuclear receptor subfamily 5 group A member 2; LRH-1, beta-catenin, armadillo repeat, nuclear receptor LIGA binding domain, protein binding; HET: P6L; 2.76A {Homo sapiens} Length = 352 | Back alignment and structure |
|---|
| >2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus} Length = 253 | Back alignment and structure |
|---|
| >2wvr_C DNA replication factor CDT1; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens} PDB: 2klo_A* Length = 546 | Back alignment and structure |
|---|
| >2wvr_C DNA replication factor CDT1; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens} PDB: 2klo_A* Length = 546 | Back alignment and structure |
|---|
| >2wvr_C DNA replication factor CDT1; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens} PDB: 2klo_A* Length = 546 | Back alignment and structure |
|---|
| >2wvr_C DNA replication factor CDT1; DNA replication license, DNA replication inhibitor, phosphoprotein, UBL conjugation, DNA-binding, polymorphism; HET: DNA; 3.30A {Homo sapiens} PDB: 2klo_A* Length = 546 | Back alignment and structure |
|---|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
| >2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681 | Back alignment and structure |
|---|
| >2kpy_A Major pollen allergen ART V 1; defensin-like, poly-proline; NMR {Artemisia vulgaris} Length = 108 | Back alignment and structure |
|---|
| >1pk8_A RAT synapsin I; ATP binding, ATP grAsp, calcium (II) ION, membrane protein; HET: ATP; 2.10A {Rattus norvegicus} SCOP: c.30.1.5 d.142.1.3 PDB: 1px2_A* Length = 422 | Back alignment and structure |
|---|
| >3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion, viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A {Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A* Length = 703 | Back alignment and structure |
|---|
| >3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae} Length = 371 | Back alignment and structure |
|---|
| >1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens} Length = 512 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1135 | |||
| 3n0a_A | 361 | Tyrosine-protein phosphatase auxilin; phosphatase- | 100.0 | |
| 3v0d_A | 339 | Voltage-sensor containing phosphatase; PTP, hydrol | 100.0 | |
| 1d5r_A | 324 | Phosphoinositide phosphotase PTEN; C2 domain, phos | 100.0 | |
| 1v9d_A | 340 | Diaphanous protein homolog 1; helix bundle, protei | 100.0 | |
| 3obv_E | 457 | Protein diaphanous homolog 1; autoinhibition, acti | 100.0 | |
| 2j1d_G | 483 | DAAM1, disheveled-associated activator of morphoge | 100.0 | |
| 4eah_A | 402 | Formin-like protein 3, actin, alpha skeletal muscl | 100.0 | |
| 1ux5_A | 411 | BNI1 protein; structural protein, FH2 actin cytosk | 100.0 | |
| 2c46_A | 241 | MRNA capping enzyme; phosphatase, transferase, hyd | 99.73 | |
| 3rz2_A | 189 | Protein tyrosine phosphatase type IVA 1; tyrosine | 99.62 | |
| 1yn9_A | 169 | BVP, polynucleotide 5'-phosphatase; RNA triphospha | 99.61 | |
| 2img_A | 151 | Dual specificity protein phosphatase 23; DUSP23, V | 99.51 | |
| 4erc_A | 150 | Dual specificity protein phosphatase 23; alpha bet | 99.47 | |
| 1ohe_A | 348 | CDC14B, CDC14B2 phosphatase; protein phosphatase, | 99.43 | |
| 1fpz_A | 212 | Cyclin-dependent kinase inhibitor 3; alpha-beta sa | 99.37 | |
| 1rxd_A | 159 | Protein tyrosine phosphatase type IVA, member 1; p | 99.33 | |
| 3s4o_A | 167 | Protein tyrosine phosphatase-like protein; structu | 99.25 | |
| 3rgo_A | 157 | Protein-tyrosine phosphatase mitochondrial 1; phos | 99.2 | |
| 2i6j_A | 161 | Ssoptp, sulfolobus solfataricus protein tyrosine p | 99.16 | |
| 3ezz_A | 144 | Dual specificity protein phosphatase 4; alpha/beta | 98.99 | |
| 2wgp_A | 190 | Dual specificity protein phosphatase 14; MKP6, DUS | 98.99 | |
| 3f81_A | 183 | Dual specificity protein phosphatase 3; hydrolase, | 98.98 | |
| 1xri_A | 151 | AT1G05000; structural genomics, protein structure | 98.97 | |
| 2y96_A | 219 | Dual specificity phosphatase DUPD1; hydrolase; 2.3 | 98.95 | |
| 1zzw_A | 149 | Dual specificity protein phosphatase 10; MKP, PTP, | 98.95 | |
| 2hcm_A | 164 | Dual specificity protein phosphatase; structural g | 98.95 | |
| 2g6z_A | 211 | Dual specificity protein phosphatase 5; alpha/beta | 98.87 | |
| 2oud_A | 177 | Dual specificity protein phosphatase 10; A central | 98.86 | |
| 2esb_A | 188 | Dual specificity protein phosphatase 18; alpha/bet | 98.83 | |
| 2e0t_A | 151 | Dual specificity phosphatase 26; conserved hypothe | 98.81 | |
| 1yz4_A | 160 | DUSP15, dual specificity phosphatase-like 15 isofo | 98.75 | |
| 1wrm_A | 165 | Dual specificity phosphatase 22; DSP, JNK, hydrola | 98.75 | |
| 3s4e_A | 144 | Dual specificity protein phosphatase 19; PTP, prot | 98.72 | |
| 3emu_A | 161 | Leucine rich repeat and phosphatase domain contain | 98.72 | |
| 2hxp_A | 155 | Dual specificity protein phosphatase 9; human phos | 98.72 | |
| 2nt2_A | 145 | Protein phosphatase slingshot homolog 2; alpha/bet | 98.71 | |
| 3nme_A | 294 | Ptpkis1 protein, SEX4 glucan phosphatase; dual spe | 98.66 | |
| 2q05_A | 195 | Late protein H1, dual specificity protein phosphat | 98.64 | |
| 2r0b_A | 154 | Serine/threonine/tyrosine-interacting protein; str | 98.63 | |
| 3cm3_A | 176 | Late protein H1, dual specificity protein phosphat | 98.63 | |
| 2j16_A | 182 | SDP-1, tyrosine-protein phosphatase YIL113W; hydro | 98.57 | |
| 2pq5_A | 205 | Dual specificity protein phosphatase 13; hydrolase | 98.54 | |
| 1g4w_R | 383 | Protein tyrosine phosphatase SPTP; virulence facto | 98.23 | |
| 2hc1_A | 291 | Receptor-type tyrosine-protein phosphatase beta; p | 98.11 | |
| 1fpr_A | 284 | Protein-tyrosine phosphatase 1C; protein tyrosine | 98.02 | |
| 1p15_A | 253 | Protein-tyrosine phosphatase alpha; transmembrane, | 98.02 | |
| 3mmj_A | 314 | MYO-inositol hexaphosphate phosphohydrolase; phyta | 98.02 | |
| 3f41_A | 629 | Phytase; tandem repeat, protein tyrosine phosphata | 97.96 | |
| 1jln_A | 297 | STEP-like ptpase, protein tyrosine phosphatase, re | 97.87 | |
| 4grz_A | 288 | Tyrosine-protein phosphatase non-receptor type 6; | 97.85 | |
| 2cm2_A | 304 | Tyrosine-protein phosphatase non-receptor type 1; | 97.84 | |
| 3b7o_A | 316 | Tyrosine-protein phosphatase non-receptor type 11; | 97.83 | |
| 1zc0_A | 309 | Tyrosine-protein phosphatase, non-receptor type 7; | 97.81 | |
| 1l8k_A | 314 | T-cell protein-tyrosine phosphatase; hydrolase; 2. | 97.8 | |
| 2oc3_A | 303 | Tyrosine-protein phosphatase non-receptor type 18; | 97.74 | |
| 4az1_A | 302 | Tyrosine specific protein phosphatase; hydrolase, | 97.73 | |
| 1wch_A | 315 | Protein tyrosine phosphatase, non-receptor type 13 | 97.72 | |
| 2i75_A | 320 | Tyrosine-protein phosphatase non-receptor type 4; | 97.72 | |
| 2b49_A | 287 | Protein tyrosine phosphatase, non-receptor type 3; | 97.7 | |
| 3m4u_A | 306 | Tyrosine specific protein phosphatase, putative; p | 97.67 | |
| 2gjt_A | 295 | Receptor-type tyrosine-protein phosphatase PTPro; | 97.66 | |
| 1yfo_A | 302 | D1, receptor protein tyrosine phosphatase alpha; h | 97.66 | |
| 2bzl_A | 325 | Tyrosine-protein phosphatase, non-receptor type 14 | 97.65 | |
| 2i1y_A | 301 | Receptor-type tyrosine-protein phosphatase; recept | 97.64 | |
| 2ooq_A | 286 | Receptor-type tyrosine-protein phosphatase T; prot | 97.63 | |
| 2cjz_A | 305 | Human protein tyrosine phosphatase PTPN5; protein | 97.6 | |
| 2p6x_A | 309 | Tyrosine-protein phosphatase non-receptor type 22; | 97.58 | |
| 3i36_A | 342 | Vascular protein tyrosine phosphatase 1; PTP, hydr | 97.58 | |
| 3f41_A | 629 | Phytase; tandem repeat, protein tyrosine phosphata | 97.57 | |
| 4i8n_A | 354 | Tyrosine-protein phosphatase non-receptor type 1; | 97.52 | |
| 2b3o_A | 532 | Tyrosine-protein phosphatase, non-receptor type 6; | 97.51 | |
| 2jjd_A | 599 | Receptor-type tyrosine-protein phosphatase epsilo; | 97.48 | |
| 3s3e_A | 307 | Tyrosine-protein phosphatase 10D; differentiation, | 97.46 | |
| 2h4v_A | 320 | Receptor-type tyrosine-protein phosphatase gamma; | 97.45 | |
| 2f46_A | 156 | Hypothetical protein; structural genomics, joint c | 97.38 | |
| 1lar_A | 575 | Protein (LAR); tyrosine phosphatease, LAR protein, | 97.38 | |
| 2shp_A | 525 | SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin | 97.33 | |
| 1ygr_A | 610 | CD45 protein tyrosine phosphatase; protein tyrosin | 97.19 | |
| 1lyv_A | 306 | Protein-tyrosine phosphatase YOPH; toxin, hydrolas | 97.11 | |
| 1lar_A | 575 | Protein (LAR); tyrosine phosphatease, LAR protein, | 97.1 | |
| 3ps5_A | 595 | Tyrosine-protein phosphatase non-receptor type 6; | 97.02 | |
| 4ge6_A | 314 | Tyrosine-protein phosphatase non-receptor type 9; | 96.98 | |
| 2jjd_A | 599 | Receptor-type tyrosine-protein phosphatase epsilo; | 96.77 | |
| 1ygr_A | 610 | CD45 protein tyrosine phosphatase; protein tyrosin | 96.7 | |
| 2nlk_A | 627 | Protein tyrosine phosphatase, receptor type, G VA | 96.54 | |
| 2nlk_A | 627 | Protein tyrosine phosphatase, receptor type, G VA | 96.34 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 95.58 | |
| 1ywf_A | 296 | Phosphotyrosine protein phosphatase PTPB; four str | 95.17 | |
| 3h0g_A | 1752 | DNA-directed RNA polymerase II subunit RPB1; trans | 94.12 | |
| 3h0g_A | 1752 | DNA-directed RNA polymerase II subunit RPB1; trans | 93.7 | |
| 1ohe_A | 348 | CDC14B, CDC14B2 phosphatase; protein phosphatase, | 91.62 | |
| 4hpq_C | 413 | ATG17, KLTH0D15642P; autophagy, protein transport; | 85.23 |
| >3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2 domain, hydrolase; 2.20A {Bos taurus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-67 Score=599.38 Aligned_cols=293 Identities=22% Similarity=0.416 Sum_probs=248.1
Q ss_pred ccCCCCCCeeeecCceEEeecCCCCCCCchhhhcccHHHHHHHHhhhCCCCcEEEEEeccCCccccccccccccCCeeec
Q 001156 8 FYRKPPDRLLEISERVYVFDCCFSTDVLEEDDYKSYMGGIVAQLQDHFPDASFMVFNFREGEKRSQISDILSQYDMTVMD 87 (1135)
Q Consensus 8 ~~~~~~lDLtyIT~RIiam~~~fP~~~~~e~~yrn~i~~V~~~L~~~h~~~~y~V~NLs~~~~~s~~~~~~~~f~~~V~~ 87 (1135)
.|.+.+|||+|||+||||| +||++++ |+.|||++++|++||+++|++| |+|||||++.|+ .+.|+++|.+
T Consensus 16 ~~~~~~LDltyIT~riIam--~~P~~~~-e~~yrn~i~~v~~~L~~~H~~~-y~V~NLse~~Yd------~~~f~~~V~~ 85 (361)
T 3n0a_A 16 SYTKGDLDFTYVTSRIIVM--SFPLDSV-DIGFRNQVDDIRSFLDSRHLDH-YTVYNLSPKSYR------TAKFHSRVSE 85 (361)
T ss_dssp EEESSSCEEEESSSSEEEE--EC-------------CHHHHHHHHHHHTTC-EEEEECSSSCCG------GGSCGGGEEE
T ss_pred HhcCCCccEEEEcCCEEEE--ECCCCCc-hhhhcCCHHHHHHHHHHhCCCe-EEEEECCCCCCC------hhhcCCcEEE
Confidence 4788899999999999999 8999998 9999999999999999999996 999999998776 4578999999
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEecCCCcCchhhHHHHHHHHhhccCCHHHHHHHHHHhcchhh
Q 001156 88 YPREYEHCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYTGELKTLEMVYKQAPREL 167 (1135)
Q Consensus 88 ~p~~~~~~p~p~L~~l~~~c~~~~~wL~~~d~~NVvviHCk~Gk~grtg~~iaa~L~y~~~~~~~~~al~~~~~~~~~~~ 167 (1135)
|+|+|++.| +++.|+.||+.|++||++ +++|+|+|||++|+ ||||+||||||+|++.+.++++||++|..+++.
T Consensus 86 ~~~pD~~~P--~l~~l~~~~~~i~~~l~~-~~~~~v~VHC~aG~-GRtg~~ia~~Li~~~~~~~~~eAl~~~~~~R~~-- 159 (361)
T 3n0a_A 86 CSWPIRQAP--SLHNLFAVCRNMYNWLLQ-NPKNVCVVHCLDGR-AASSILVGAMFIFCNLYSTPGPAVRLLYAKRPG-- 159 (361)
T ss_dssp CCCCSSSCC--CHHHHHHHHHHHHHHHHH-CTTCEEEEEECSCT-HHHHHHHHHHHHHTTSCSSHHHHHHHHHHHSTT--
T ss_pred eecCCCCCC--CHHHHHHHHHHHHHHHhc-CCCCeEEEEeCCCC-ccHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCC--
Confidence 999998877 899999999999999999 99999999999999 699999999999999999999999998543321
Q ss_pred hccCCCCCCCchHHHHHHHHHHhccCCCCCCCCCceEEEEEEEEcccC-CC-CCCceeEEEEEecCCCCCCCCCCceEEe
Q 001156 168 LHLLSPLNPQPSQLRYLQYISRRNLGSDWPPSDTPLLLNCLILRVLPI-YG-GNGCRPVIRVYGQDSKIPANRSSKLLFS 245 (1135)
Q Consensus 168 ~~~~~~~~~~PSQ~RYv~Yf~~ll~~~~~~p~~~~l~L~~iil~~iP~-~~-~~gcrP~~~Iy~~~~~~~~~~~~~~v~s 245 (1135)
. +.+|||+|||+||++++.+..+.|+.++|+|++|+|++||+ +. +|||||||+||+++ +.||+
T Consensus 160 -----~-~~~psQ~ryv~yf~~ll~~~~~~P~~~~L~L~~i~l~~iP~f~~~~~GCrP~~~Iy~~~---------~~v~s 224 (361)
T 3n0a_A 160 -----I-GLSPSHRRYLGYMCDLLADKPYRPHFKPLTIKSITVSPVPFFNKQRNGCRPYCDVLIGE---------TKIYT 224 (361)
T ss_dssp -----C-CCCHHHHHHHHHHHHHHSSSCCCCCCCCEEEEEEEEESCCCCSTTSSEECEEEEEEETT---------EEEEE
T ss_pred -----C-CCCHHHHHHHHHHHHHHhcCCcCCCCceeEEEEEEEecCCcccCCCCCcceEEEEEeCC---------eEEEe
Confidence 1 25999999999999999988788899999999999999999 43 68999999999986 67999
Q ss_pred ccccccccccccccceEEEEecccceeecCeEEEEEeccccc-------cccceEEEEEecccccc-------cC--CCC
Q 001156 246 TFKFKTNVRHYLQDECALVKIDIYCRVQGDVVIECVHLEDDL-------VREEMMFRVMFHTAFVL-------FS--DAD 309 (1135)
Q Consensus 246 s~~~~~~~~~y~~~d~~~i~~~~~~~v~GDV~i~~~h~~~~~-------~~~~~mFr~~FnT~Fi~-------f~--elD 309 (1135)
+.+.++.++.|.++++ .|.|+.++.|+|||+|+|||++... .++++|||||||||||. |. |||
T Consensus 225 s~~~~~~~r~~~~~~~-~i~i~~~~~l~GDV~v~~~h~~~~~g~~l~~k~~~~~mFr~~FhT~FI~~~~~~l~~~k~eLD 303 (361)
T 3n0a_A 225 TCADFERMKEYRVQDG-KIFIPLSITVQGDVVVSMYHLRSTIGSRLQAKVTNTQIFQLQFHTGFIPLDTTVLKFTKPELD 303 (361)
T ss_dssp CCCCGGGSCCEEGGGC-CEEEEEEEEECSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEGGGSCTTCCEEEEEGGGCB
T ss_pred cCchhhccccccccCc-eEEeCCCCeEECCEEEEEEeCCCccccccccccccceEEEEEeeeeEeeCCceEEEeEhhhcc
Confidence 9888888999988774 4678889999999999999996432 34689999999999973 33 999
Q ss_pred CCCCCccccccccCCCCCCCCCCcccceEEEcccCCCc
Q 001156 310 AVVPNLTTVAAVEDGVETESASPEEFFEVEEIFSNVVD 347 (1135)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~ve~~Fs~~~~ 347 (1135)
.++ .+++||. +|+|++.|+-.+.
T Consensus 304 ~~~------------~~~rfp~---~f~v~l~f~~~~~ 326 (361)
T 3n0a_A 304 ACD------------VPEKYPQ---LFQVTLDVELQPH 326 (361)
T ss_dssp SCC------------CGGGSCT---TCEEEEEEEECSS
T ss_pred ccc------------ccccCCC---CeEEEEEEEecCC
Confidence 877 7889965 8899999976543
|
| >3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A | Back alignment and structure |
|---|
| >1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol, hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1 c.45.1.1 | Back alignment and structure |
|---|
| >1v9d_A Diaphanous protein homolog 1; helix bundle, protein binding; 2.60A {Mus musculus} SCOP: a.207.1.1 | Back alignment and structure |
|---|
| >3obv_E Protein diaphanous homolog 1; autoinhibition, actin, nucleation, cytoskeleton, structural; HET: SUC; 2.75A {Mus musculus} PDB: 3o4x_E 2bap_D | Back alignment and structure |
|---|
| >2j1d_G DAAM1, disheveled-associated activator of morphogenesis; actin assembly, protein binding; 2.55A {Homo sapiens} PDB: 2z6e_A | Back alignment and structure |
|---|
| >4eah_A Formin-like protein 3, actin, alpha skeletal muscle; ATP binding, cytoskeleton, FMNL3, protein BIN; HET: ATP; 3.40A {Mus musculus} | Back alignment and structure |
|---|
| >1ux5_A BNI1 protein; structural protein, FH2 actin cytoskeleton; 2.5A {Saccharomyces cerevisiae} SCOP: a.207.1.1 PDB: 1y64_B* 1ux4_A | Back alignment and structure |
|---|
| >2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A | Back alignment and structure |
|---|
| >3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A | Back alignment and structure |
|---|
| >1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus} | Back alignment and structure |
|---|
| >2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens} | Back alignment and structure |
|---|
| >4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A | Back alignment and structure |
|---|
| >1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A* | Back alignment and structure |
|---|
| >1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A | Back alignment and structure |
|---|
| >3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major} | Back alignment and structure |
|---|
| >3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A* | Back alignment and structure |
|---|
| >2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB: 2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A* | Back alignment and structure |
|---|
| >3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A | Back alignment and structure |
|---|
| >2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase, dual specifici phosphatase; 1.88A {Homo sapiens} | Back alignment and structure |
|---|
| >3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A* | Back alignment and structure |
|---|
| >1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A | Back alignment and structure |
|---|
| >2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens} | Back alignment and structure |
|---|
| >1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >2hcm_A Dual specificity protein phosphatase; structural genomics, PSI, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Mus musculus} | Back alignment and structure |
|---|
| >2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
| >2oud_A Dual specificity protein phosphatase 10; A central five-stranded B-sheet, hydrolase; 2.80A {Homo sapiens} | Back alignment and structure |
|---|
| >2esb_A Dual specificity protein phosphatase 18; alpha/beta structure, hydrolase; HET: EPE; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein, structural genomics, NPPSFA, project on protein structural and functional analyses; 1.67A {Homo sapiens} | Back alignment and structure |
|---|
| >1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens} | Back alignment and structure |
|---|
| >3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica} | Back alignment and structure |
|---|
| >2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A | Back alignment and structure |
|---|
| >2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
| >3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity phosphatase, carbohydrate BIND hydrolase; 2.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
| >2q05_A Late protein H1, dual specificity protein phosphatase; structural genomics, APC7320, P protein structure initiative; HET: MSE; 2.57A {Vaccinia virus WR} | Back alignment and structure |
|---|
| >2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics, phosphatase, PSI-2, protein structure initiative; 1.60A {Homo sapiens} | Back alignment and structure |
|---|
| >3cm3_A Late protein H1, dual specificity protein phosphatase; dual-specificity phosphatase, VH1, hydrolase; 1.32A {Vaccinia virus} PDB: 2rf6_A 2p4d_A | Back alignment and structure |
|---|
| >2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual specificity phosphatase, DUSP13, testis and skeletal muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A | Back alignment and structure |
|---|
| >1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase activating protein, 4-helix bundle, disorder, signaling protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1 c.45.1.2 PDB: 1g4u_S | Back alignment and structure |
|---|
| >2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine phosphatase, WPD-loop, sulfamic acid, inhibitor, drug design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A 2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A* 2i4h_A* 2i5x_A* 2ahs_A | Back alignment and structure |
|---|
| >1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase, substrate specificity, residue shift, signaling protein; HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB: 1gwz_A | Back alignment and structure |
|---|
| >1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase, phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein tyrosine phosphatase, inositol phosphate, I phosphatase; HET: IHP; 1.60A {Selenomonas ruminantium} SCOP: c.45.1.4 PDB: 1u24_A 1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A 3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A | Back alignment and structure |
|---|
| >3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} | Back alignment and structure |
|---|
| >1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R; PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase; 1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A | Back alignment and structure |
|---|
| >4grz_A Tyrosine-protein phosphatase non-receptor type 6; phosphatase domain, hydrolase; 1.37A {Homo sapiens} PDB: 4gry_A 4gs0_A* 1gwz_A 1fpr_A* | Back alignment and structure |
|---|
| >2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism, phosphorylation, endoplasmic reticulum, oxidation, hydrolase, acetylation; 1.5A {Homo sapiens} SCOP: c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A 2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A* 2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A* 2zn7_A* ... | Back alignment and structure |
|---|
| >3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11, tyrosine phosphatase, structural genomics, STR genomics consortium, SGC, deafness; 1.60A {Homo sapiens} PDB: 3jrl_A* 3mow_A* 3o5x_A* | Back alignment and structure |
|---|
| >1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human tyrosine phosphatase catalytic domain, LC-PTP, hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A 2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A* 3d42_A* 2a3k_A | Back alignment and structure |
|---|
| >1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo sapiens} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine phosphatase, human, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens} | Back alignment and structure |
|---|
| >4az1_A Tyrosine specific protein phosphatase; hydrolase, drug design; 2.18A {Trypanosoma cruzi} | Back alignment and structure |
|---|
| >1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase, phosphate ION, colorectal cancer alternative splicing, coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP, tyrosine phosphatase, MEG-1, structural genomics structural genomics consortium, SGC; 2.45A {Homo sapiens} | Back alignment and structure |
|---|
| >2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU genomics, structural genomics consortium, SGC, hydrolase; 1.54A {Homo sapiens} | Back alignment and structure |
|---|
| >3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine phosphatase, hydrolase; 2.39A {Trypanosoma brucei} | Back alignment and structure |
|---|
| >2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine phosphatase, glepp1, PTPU2, structural genom structural genomics consortium, SGC; 2.15A {Homo sapiens} PDB: 2g59_A 2pi7_A | Back alignment and structure |
|---|
| >1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal transduction, glycoprotein, phosphorylation, signal; 2.25A {Mus musculus} SCOP: c.45.1.2 | Back alignment and structure |
|---|
| >2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14, hydrolase; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
| >2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein tyrosine phosphatase precursor, phosph structural genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A | Back alignment and structure |
|---|
| >2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine phosphatase, human, structural GE structural genomics consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo sapiens} PDB: 1rpm_A 2c7s_A | Back alignment and structure |
|---|
| >2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase, STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB: 2bij_A 2bv5_A* | Back alignment and structure |
|---|
| >2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine phosphatase, lymphoid phosphatase, PEP, LYP, struct genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A 2qct_A* 2qcj_A* 3olr_A* 3omh_A* | Back alignment and structure |
|---|
| >3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A {Rattus norvegicus} PDB: 2nz6_A 2cfv_A | Back alignment and structure |
|---|
| >3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase; 2.30A {Mitsuokella multacida} | Back alignment and structure |
|---|
| >4i8n_A Tyrosine-protein phosphatase non-receptor type 1; PTP1B, hydrolase-hydrolase inhibitor CO; HET: 1CG; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A* | Back alignment and structure |
|---|
| >2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis, signal transduction, developm protein, hydrolase; 2.40A {Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A* | Back alignment and structure |
|---|
| >2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor phosphatase, human, structural GENO structural genomics consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB: 3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A* 3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A* 3qcn_A | Back alignment and structure |
|---|
| >2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491} | Back alignment and structure |
|---|
| >1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A | Back alignment and structure |
|---|
| >2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2 protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2 d.93.1.1 d.93.1.1 | Back alignment and structure |
|---|
| >1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A* | Back alignment and structure |
|---|
| >1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A {Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A* 1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A* 1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A* 1pa9_A* 1yts_A | Back alignment and structure |
|---|
| >1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A 2nv5_A | Back alignment and structure |
|---|
| >3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP, hydrolase, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
| >4ge6_A Tyrosine-protein phosphatase non-receptor type 9; hydrolase-hydrolase inhibitor complex; HET: B26; 1.40A {Homo sapiens} PDB: 4ge2_A* 4ge5_A* 2pa5_A* | Back alignment and structure |
|---|
| >2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane, phosphoprotein, consorti structural, glycoprotein, SGC, PTPRE, membrane genomics; 3.20A {Homo sapiens} | Back alignment and structure |
|---|
| >1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase, RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR; 2.90A {Homo sapiens} PDB: 1ygu_A* | Back alignment and structure |
|---|
| >2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment); PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma, D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens} | Back alignment and structure |
|---|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
| >1ywf_A Phosphotyrosine protein phosphatase PTPB; four stranded parallel beta sheet with flanking helices, structural genomics, PSI; 1.71A {Mycobacterium tuberculosis} SCOP: c.45.1.5 PDB: 2oz5_A* | Back alignment and structure |
|---|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >3h0g_A DNA-directed RNA polymerase II subunit RPB1; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
| >1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle, hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1 c.45.1.1 PDB: 1ohc_A 1ohd_A | Back alignment and structure |
|---|
| >4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1135 | ||||
| d1v9da_ | 332 | a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 | 5e-72 | |
| d1ux5a_ | 411 | a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces | 1e-50 | |
| d1d5ra1 | 141 | b.7.1.1 (A:188-351) Pten tumor suppressor (Phoshph | 2e-26 | |
| d1d5ra2 | 174 | c.45.1.1 (A:14-187) Phoshphoinositide phosphatase | 8e-20 |
| >d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 332 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Diaphanous protein homolog 1, dia1 species: Mouse (Mus musculus) [TaxId: 10090]
Score = 241 bits (615), Expect = 5e-72
Identities = 72/322 (22%), Positives = 133/322 (41%), Gaps = 71/322 (22%)
Query: 871 IDLRRANNTEIMLTKVKMPLPDMMVAVLAMDESVLDVDQVENLIKFCPTKEEMELLKNYT 930
+D + A N I L +MP ++ +L ++E+VL ++NLIK P E++++L
Sbjct: 7 LDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELK 66
Query: 931 GDKENLGKCEQ---------------------------ISEFRKNLNTVNSACEEVRNSI 963
+ ++L + EQ + + + +V +ACEE+R S
Sbjct: 67 EEYDDLAESEQFGVVMGTVPRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSE 126
Query: 964 KLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDTRASNSKMTLMHYLC------- 1016
+++ L +GN +N G+ A GF + L KL DT++++ KMTL+H+L
Sbjct: 127 NFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDTKSADQKMTLLHFLAELCENDH 186
Query: 1017 -----------------KIQLKSLAEEMQAIIKGLEK--------------------TLK 1039
++ ++L + + + K + +
Sbjct: 187 PEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEKMT 246
Query: 1040 GFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEE 1099
F+ A+ + + ++S L YF DP + E+ L NF +F +A +E
Sbjct: 247 SFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKE 306
Query: 1100 NVKQSELERKKAEKEAEMEKAK 1121
N K+ E E K + EKA+
Sbjct: 307 NQKRRETEEKMRRAKLAKEKAE 328
|
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 411 | Back information, alignment and structure |
|---|
| >d1d5ra1 b.7.1.1 (A:188-351) Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 141 | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1135 | |||
| d1v9da_ | 332 | Diaphanous protein homolog 1, dia1 {Mouse (Mus mus | 100.0 | |
| d1ux5a_ | 411 | Bni1 {Baker's yeast (Saccharomyces cerevisiae) [Ta | 100.0 | |
| d1d5ra2 | 174 | Phoshphoinositide phosphatase Pten (Pten tumor sup | 100.0 | |
| d1d5ra1 | 141 | Pten tumor suppressor (Phoshphoinositide phosphata | 99.91 | |
| d1fpza_ | 176 | Kinase associated phosphatase (kap) {Human (Homo s | 99.82 | |
| d1i9sa_ | 194 | mRNA capping enzyme, triphosphatase domain {Mouse | 99.8 | |
| d1ohea2 | 182 | Proline directed phosphatase CDC14b2 {Human (Homo | 99.74 | |
| d1rxda_ | 152 | Protein tyrosine phosphatase type IVa {Human (Homo | 99.7 | |
| d1mkpa_ | 144 | Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp | 98.83 | |
| d1vhra_ | 178 | VH1-related dual-specificity phosphatase, VHR {Hum | 98.55 | |
| d1xria_ | 151 | Putative phosphatase At1g05000 {Thale cress (Arabi | 98.34 | |
| d1m3ga_ | 145 | Mapk phosphatase {Human (Homo sapiens), pac-1 [Tax | 98.23 | |
| d2pt0a1 | 313 | Myo-inositol hexaphosphate phosphohydrolase (phyta | 98.1 | |
| d1g4us2 | 243 | SptP tyrosine phosphatase, catalytic domain {Salmo | 97.8 | |
| d2shpa1 | 307 | Tyrosine phosphatase {Human (Homo sapiens), shp-2 | 97.22 | |
| d1wcha_ | 308 | Tyrosine-protein phosphatase, non-receptor type 13 | 97.22 | |
| d1l8ka_ | 273 | Tyrosine phosphatase {Human (Homo sapiens), T-cell | 97.21 | |
| d1jlna_ | 297 | Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl | 97.07 | |
| d1fpra_ | 284 | Tyrosine phosphatase {Human (Homo sapiens), shp-1 | 96.93 | |
| d2f71a1 | 297 | Tyrosine phosphatase {Human (Homo sapiens), 1B [Ta | 96.9 | |
| d1yfoa_ | 288 | Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: | 96.86 | |
| d1lara2 | 249 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 96.84 | |
| d1lara1 | 317 | RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | 96.79 | |
| d1rpma_ | 278 | Tyrosine phosphatase {Human (Homo sapiens), mu [Ta | 96.73 | |
| d1p15a_ | 245 | Protein-tyrosine phosphatase alpha {Mouse (Mus mus | 96.62 | |
| d1lyva_ | 283 | Protein-tyrosine phosphatase YopH, catalytic domai | 96.56 | |
| d1ywfa1 | 272 | Phosphotyrosine protein phosphatase PtpB {Mycobact | 91.88 | |
| d1ohea1 | 157 | Proline directed phosphatase CDC14b2 {Human (Homo | 90.49 |
| >d1v9da_ a.207.1.1 (A:) Diaphanous protein homolog 1, dia1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Formin homology 2 domain (FH2 domain) superfamily: Formin homology 2 domain (FH2 domain) family: Formin homology 2 domain (FH2 domain) domain: Diaphanous protein homolog 1, dia1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=100.00 E-value=1.1e-45 Score=419.92 Aligned_cols=244 Identities=28% Similarity=0.491 Sum_probs=202.8
Q ss_pred ccccccccchhhhhccCCCCHHhHHHHHHhhccccccHHHHHHHHHhCCChHHHHHhhhccCCCCCCChhhh--------
Q 001156 870 KIDLRRANNTEIMLTKVKMPLPDMMVAVLAMDESVLDVDQVENLIKFCPTKEEMELLKNYTGDKENLGKCEQ-------- 941 (1135)
Q Consensus 870 kLD~kRaqNi~I~L~klk~~~~ei~~aI~~lD~~~L~~d~ve~L~~~~Pt~eE~~~Lk~~~g~~~~L~~~Eq-------- 941 (1135)
.||.||+|||+|+|++|+++.++|+++|+.||..+|+.|.|+.|++++||.||++.|++|.|+.+.|+.+||
T Consensus 6 vLd~kr~~ni~I~L~~~k~~~~~i~~ai~~~D~~~l~~e~l~~L~~~~Pt~eE~~~l~~~~~~~~~L~~~E~f~~~l~~i 85 (332)
T d1v9da_ 6 VLDSKTAQNLSIFLGSFRMPYQEIKNVILEVNEAVLTESMIQNLIKQMPEPEQLKMLSELKEEYDDLAESEQFGVVMGTV 85 (332)
T ss_dssp SSCHHHHHHHHHHHHHHCCCHHHHHHHHHHTCTTTCCHHHHHHHHHHSCCHHHHHHHHTCGGGGGGSCHHHHHHHHHHTS
T ss_pred eccHHHHHHHHHHHhhCCcCHHHHHHHHHhCCcccCCHHHHHHHHHhCcCHHHHHHHHHhcCChhhcChHHHHHHHHhcc
Confidence 489999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred -------------------HHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHhccccCCCCCCCcceecccccchhhhhhc
Q 001156 942 -------------------ISEFRKNLNTVNSACEEVRNSIKLKEIMKKILYLGNTLNQGTARGSAVGFKLDSLLKLTDT 1002 (1135)
Q Consensus 942 -------------------v~~l~~~L~~l~~a~~el~~S~~L~~lL~~IL~iGN~lN~g~~rg~A~GFkLssL~KL~dt 1002 (1135)
++++...|..+..||++|++|..|+.+|++||.+|||||+|+.+|+|.||+|++|.||.++
T Consensus 86 p~~~~Rl~~~~~~~~f~~~~~~l~~~l~~l~~a~~~l~~S~~l~~~L~~iL~~GN~mN~g~~~g~A~GFkL~sL~kL~d~ 165 (332)
T d1v9da_ 86 PRLRPRLNAILFKLQFSEQVENIKPEIVSVTAACEELRKSENFSSLLELTLLVGNYMNAGSRNAGAFGFNISFLCKLRDT 165 (332)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTCHHHHHCC------------------------CCHHHHHHS
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChhHHHHHHHHHHhcchhccccccccccccCHHHHHhHhhc
Confidence 6778899999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCccchhhhHH------------------------HHhhhHHHHHHHHHHHHHH--------------------HH
Q 001156 1003 RASNSKMTLMHYLCK------------------------IQLKSLAEEMQAIIKGLEK--------------------TL 1038 (1135)
Q Consensus 1003 Ks~d~k~TLLhyLv~------------------------iqL~~L~~e~~~l~k~Lek--------------------~l 1038 (1135)
|++|+++||||||++ ++++++..+++.+.++++. +|
T Consensus 166 Ks~d~~~tLL~~iv~~~~~~~p~l~~~~~eL~~v~~ask~~~~~l~~~~~~l~~~l~~~~~~l~~~~~~~~~~d~f~~~~ 245 (332)
T d1v9da_ 166 KSADQKMTLLHFLAELCENDHPEVLKFPDELAHVEKASRVSAENLQKSLDQMKKQIADVERDVQNFPAATDEKDKFVEKM 245 (332)
T ss_dssp BCSSTTSBHHHHHHHHHHHSCCTTSSGGGGCTTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHTCCCCSSSSCCHHHHH
T ss_pred cCCCCCccHHHHHHHHHHHhCchhccchhhhhhHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHH
Confidence 999999999999998 3455666677766666543 88
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001156 1039 KGFISVAEVEVASVTNLYSVAGRNADALALYFGEDPARCPFEQVTATLLNFVRLFRKAHEENVKQSELERKKAEK 1113 (1135)
Q Consensus 1039 ~~Fl~~a~~~l~~L~~~~~~~~~~~~~l~~yFGEd~~~~~~eeff~~l~~Fi~~fkka~~en~k~~e~Ekkk~~r 1113 (1135)
..|++.++.++..|...+.++.+.|.+++.|||||++++++++||++|.+|+..|++|++||+++++++++.+++
T Consensus 246 ~~Fl~~a~~~l~~l~~~~~~~~~~~~~~~~yfgEd~~~~~~~efF~~~~~F~~~~~~a~~e~~~~~~~~~~~~r~ 320 (332)
T d1v9da_ 246 TSFVKDAQEQYNKLRMMHSNMETLYKELGDYFVFDPKKLSVEEFFMDLHNFRNMFLQAVKENQKRRETEEKMRRA 320 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999999998877666544333
|
| >d1ux5a_ a.207.1.1 (A:) Bni1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten (Pten tumor suppressor), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1d5ra1 b.7.1.1 (A:188-351) Pten tumor suppressor (Phoshphoinositide phosphatase), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human (Homo sapiens), pr-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1 (mkp3) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1xria_ c.45.1.1 (A:) Putative phosphatase At1g05000 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate phosphohydrolase (phytase) PhyA {Selenomonas ruminantium [TaxId: 971]} | Back information, alignment and structure |
|---|
| >d1g4us2 c.45.1.2 (S:297-539) SptP tyrosine phosphatase, catalytic domain {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo sapiens), shp-2 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wcha_ c.45.1.2 (A:) Tyrosine-protein phosphatase, non-receptor type 13 (PTPL1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1l8ka_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), T-cell [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1jlna_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus), ptp-sl/br7 [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fpra_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), shp-1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2f71a1 c.45.1.2 (A:2-298) Tyrosine phosphatase {Human (Homo sapiens), 1B [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1lara2 c.45.1.2 (A:1628-1876) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1lara1 c.45.1.2 (A:1307-1623) RPTP Lar {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1rpma_ c.45.1.2 (A:) Tyrosine phosphatase {Human (Homo sapiens), mu [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1p15a_ c.45.1.2 (A:) Protein-tyrosine phosphatase alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1lyva_ c.45.1.2 (A:) Protein-tyrosine phosphatase YopH, catalytic domain {Yersinia enterocolitica [TaxId: 630]} | Back information, alignment and structure |
|---|
| >d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1ohea1 c.45.1.1 (A:42-198) Proline directed phosphatase CDC14b2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|