Citrus Sinensis ID: 001290
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1106 | 2.2.26 [Sep-21-2011] | |||||||
| Q6S001 | 685 | Kinesin-related protein 1 | yes | no | 0.319 | 0.515 | 0.442 | 1e-79 | |
| Q54NP8 | 1922 | Kinesin-related protein 4 | no | no | 0.307 | 0.176 | 0.432 | 1e-75 | |
| Q02224 | 2701 | Centromere-associated pro | yes | no | 0.341 | 0.139 | 0.406 | 3e-70 | |
| Q6RT24 | 2474 | Centromere-associated pro | yes | no | 0.333 | 0.149 | 0.413 | 4e-70 | |
| O15066 | 747 | Kinesin-like protein KIF3 | no | no | 0.316 | 0.468 | 0.401 | 3e-63 | |
| Q61771 | 747 | Kinesin-like protein KIF3 | no | no | 0.316 | 0.468 | 0.398 | 5e-63 | |
| P46869 | 786 | Kinesin-like protein FLA1 | N/A | no | 0.322 | 0.454 | 0.372 | 1e-62 | |
| P46871 | 742 | Kinesin-II 95 kDa subunit | no | no | 0.312 | 0.466 | 0.378 | 6e-60 | |
| Q9P2E2 | 1029 | Kinesin-like protein KIF1 | no | no | 0.366 | 0.393 | 0.343 | 4e-59 | |
| P28741 | 701 | Kinesin-like protein KIF3 | no | no | 0.311 | 0.492 | 0.384 | 7e-59 |
| >sp|Q6S001|KIF11_DICDI Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1 | Back alignment and function desciption |
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Score = 299 bits (765), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 244/368 (66%), Gaps = 15/368 (4%)
Query: 69 AYTFDRVFGCECPTRQVYEEAAKEVTLSVVNGINSTFFAYGQTSSGKTYTMGG------- 121
+YT+D +F C +VY+ A+E+ S + G N++ AYG TSSGKT+TM G
Sbjct: 116 SYTYDHLFPPTCDNYEVYDTVARELVKSAMEGYNASIMAYGITSSGKTFTMTGSGKKNPG 175
Query: 122 ITEYAIQDIYDYIDTHQEREFVLKFSAMEIYNESVRDLLSTD--STPLRLLDDPEKGTVV 179
I +IQDI+ YI +EREF+L+ S +EIYNE+V DLL + + L++ + P G V
Sbjct: 176 IIPLSIQDIFTYIQECKEREFLLRVSYLEIYNETVNDLLGVNQENFNLKIHEHPVTGVYV 235
Query: 180 ERLTEETLTDMSHLMELLAVCEAQRQIGETALNETSSRSHQILRLTIESSAREYLGAGNS 239
L EE + + H++ L++ EA R +G T+ N SSRSH I ++ IES G+G+
Sbjct: 236 AGLKEEIVLSVEHVLSLISAGEAHRHVGSTSYNLQSSRSHTIFKMIIESKEVLPEGSGSG 295
Query: 240 SILS----ASVNFVDLAGSERASQTLNAGARLKEGSHINRSLLTLGTVIRKLSKGRNAHI 295
+ S +++N +DLAGSE+AS++ + R KEGS+IN+SLLTLGTVI KLS+ +I
Sbjct: 296 GLESPVRYSTLNLIDLAGSEKASESTISAIRNKEGSYINKSLLTLGTVISKLSEKDTGYI 355
Query: 296 PYRDSKLTRILQNSLGGNARTAIICTMSPARSHVEQSRNTLLFASCAKEVATNAQVNVVM 355
PYRDSKLTR+LQNSL GN+R AIICT++ A ++ E+S NTL FAS AK+++ NA+VN ++
Sbjct: 356 PYRDSKLTRVLQNSLSGNSRVAIICTITLASNNFEESHNTLKFASRAKKISNNAKVNEIL 415
Query: 356 SDKALVKQLQKELARLENEMKNLQSTPKKCDFTLL-KEKEQVI-EEMDRQIRELTKERDL 413
DKAL+KQ + E+A L++++ + ST K+ TL KEK ++ +E+ ++ + K R L
Sbjct: 416 DDKALLKQYRNEIAELKSKLSDALSTEKELQETLTEKEKMKITNQELLHKLVDAEKHRSL 475
Query: 414 AKSRVDNL 421
+S+++NL
Sbjct: 476 LESKINNL 483
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Microtubule-associated force-producing protein that plays a role in organelle transport. Its motor activity is directed toward the microtubule's plus end. Dictyostelium discoideum (taxid: 44689) |
| >sp|Q54NP8|KIF4_DICDI Kinesin-related protein 4 OS=Dictyostelium discoideum GN=kif4 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q02224|CENPE_HUMAN Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2 | Back alignment and function description |
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| >sp|Q6RT24|CENPE_MOUSE Centromere-associated protein E OS=Mus musculus GN=Cenpe PE=1 SV=1 | Back alignment and function description |
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| >sp|O15066|KIF3B_HUMAN Kinesin-like protein KIF3B OS=Homo sapiens GN=KIF3B PE=1 SV=1 | Back alignment and function description |
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| >sp|Q61771|KIF3B_MOUSE Kinesin-like protein KIF3B OS=Mus musculus GN=Kif3b PE=1 SV=1 | Back alignment and function description |
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| >sp|P46869|FLA10_CHLRE Kinesin-like protein FLA10 OS=Chlamydomonas reinhardtii GN=FLA10 PE=1 SV=1 | Back alignment and function description |
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| >sp|P46871|KRP95_STRPU Kinesin-II 95 kDa subunit OS=Strongylocentrotus purpuratus GN=KRP95 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q9P2E2|KIF17_HUMAN Kinesin-like protein KIF17 OS=Homo sapiens GN=KIF17 PE=2 SV=3 | Back alignment and function description |
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| >sp|P28741|KIF3A_MOUSE Kinesin-like protein KIF3A OS=Mus musculus GN=Kif3a PE=1 SV=2 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1106 | ||||||
| 297794385 | 1039 | kinesin motor family protein [Arabidopsi | 0.852 | 0.907 | 0.426 | 0.0 | |
| 255538834 | 939 | ATP binding protein, putative [Ricinus c | 0.477 | 0.562 | 0.655 | 0.0 | |
| 224066026 | 915 | predicted protein [Populus trichocarpa] | 0.480 | 0.580 | 0.655 | 0.0 | |
| 359492713 | 937 | PREDICTED: uncharacterized protein LOC10 | 0.492 | 0.581 | 0.620 | 0.0 | |
| 449470116 | 956 | PREDICTED: uncharacterized protein LOC10 | 0.471 | 0.544 | 0.640 | 0.0 | |
| 449520175 | 956 | PREDICTED: uncharacterized LOC101212680 | 0.471 | 0.544 | 0.640 | 0.0 | |
| 302142596 | 1008 | unnamed protein product [Vitis vinifera] | 0.492 | 0.540 | 0.616 | 0.0 | |
| 359474911 | 957 | PREDICTED: uncharacterized protein LOC10 | 0.485 | 0.561 | 0.636 | 0.0 | |
| 147775817 | 969 | hypothetical protein VITISV_029516 [Viti | 0.485 | 0.554 | 0.636 | 0.0 | |
| 359476842 | 960 | PREDICTED: uncharacterized protein LOC10 | 0.481 | 0.554 | 0.610 | 0.0 |
| >gi|297794385|ref|XP_002865077.1| kinesin motor family protein [Arabidopsis lyrata subsp. lyrata] gi|297310912|gb|EFH41336.1| kinesin motor family protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 750 bits (1937), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/1169 (42%), Positives = 658/1169 (56%), Gaps = 226/1169 (19%)
Query: 18 AGQEERILVFVRLRPLNEKEYARNDVSDWECINNNSIVFKN--SLLERSVYPPAYTFDRV 75
+G EE+I V VR+RPLN+KE RNDV DWECINN +I++++ S+ ERS+YP AYTFDRV
Sbjct: 13 SGTEEKIYVSVRMRPLNDKEKFRNDVPDWECINNTTIIYRSHLSISERSMYPSAYTFDRV 72
Query: 76 FGCECPTRQVYEEAAKEVTLSVVNGINSTFFAYGQTSSGKTYTMGGITEYAIQDIYDYID 135
F +C TRQVYE+ AKEV SVV+G+N++ FAYGQTSSGKTYTM GIT+ A+ DIY YID
Sbjct: 73 FSPDCCTRQVYEQGAKEVAFSVVSGVNASVFAYGQTSSGKTYTMSGITDCALVDIYGYID 132
Query: 136 THQEREFVLKFSAMEIYNESVRDLLSTDSTPLRLLDDPEKGTVVERLTEETLTDMSHLME 195
H+EREF+LKFSAMEIYNESVRDLLSTD++PLRLLDDPEKGTVVE+LTEETL D +H E
Sbjct: 133 MHKEREFILKFSAMEIYNESVRDLLSTDTSPLRLLDDPEKGTVVEKLTEETLRDWNHFKE 192
Query: 196 LLAVCEAQRQIGETALNETSSRSHQILRLTIESSAREYLGAGNSSILSASVNFVDLAGSE 255
LL+VCEAQRQIGETALNE SSRSHQILRLT+ES+ARE+ S L+A+VNF+DLAGSE
Sbjct: 193 LLSVCEAQRQIGETALNEVSSRSHQILRLTVESTAREFSTNDKFSTLTATVNFIDLAGSE 252
Query: 256 RASQTLNAGARLKEGSHINRSLLTLGTVIRKLSKGRNAHIPYRDSKLTRILQNSLGGNAR 315
RASQ+L+AG RLKEG HINRSLLTLGTVIRKLSKG+ HIP+RDSKLTRILQ+SLGGNAR
Sbjct: 253 RASQSLSAGTRLKEGCHINRSLLTLGTVIRKLSKGKTGHIPFRDSKLTRILQSSLGGNAR 312
Query: 316 TAIICTMSPARSHVEQSRNTLLFASCAKEVATNAQVNVVMSDKALVKQLQKELARLENEM 375
TAIICTMSPAR HVEQSRNTLLFASCAKEV TNAQVNVVMSDKALVK LQ+ELA+LE+E+
Sbjct: 313 TAIICTMSPARIHVEQSRNTLLFASCAKEVTTNAQVNVVMSDKALVKHLQRELAKLESEL 372
Query: 376 KNLQSTPKKCDFT-LLKEKEQVIEEMDRQIRELTKERDLAKSRVDNLLQSIGEEDQRSRL 434
++ D T LL EK +E++ +++ +L ++ + A+S + +L + + EE + +
Sbjct: 373 RSPGQASVVSDTTALLTEKNLEVEKLKKEVLQLARQLEQARSEIIDLRRMVEEEKKPEKE 432
Query: 435 DEYSEVESSDIY-------------------NPVHSDVGHETYKTSKNIDNSQLDNSSPN 475
+E E ++ P+ H + + ++ + S + N
Sbjct: 433 TLSTETEGLNVLLEHQYPKLRVRSTWDSENTTPLSPISAHRSSISPRSTEYSYEE----N 488
Query: 476 FFHLSENQEDNSLLDNSTPK--------------------FVGLDPCQGWD--------D 507
F LS+ + D++ +S+P+ V +D G +
Sbjct: 489 VFQLSDFRIDSA---SSSPQQLAFVTPFLDIHGTETVDQSHVHIDEITGQPHVQEERIYE 545
Query: 508 ITRKIDEDSEDTCKEVRCIEMEASTLNRKSESDVGKFPMTGAMEEAAFSPPSQKVRSIVM 567
+ + DE+SED C+EVRCIE E S +
Sbjct: 546 MAEQTDENSEDNCREVRCIETEKSDI---------------------------------- 571
Query: 568 EESSMERKTGSDVFSPGPEEKERRSSMTKATYEA-SELSPRGDRCIKMEESSINKTTEPD 626
S GPEEK SS K YEA SE P C+ TEP
Sbjct: 572 --------------SIGPEEKMPESSPDK--YEAVSEEEP---VCV----------TEPK 602
Query: 627 VFLSGTEEEGKLSMTGDIGEVPVTSPQKE------------DKGSSPVDKHDTEALKQKI 674
TE E K + EV SPQ + D SPV+ + +
Sbjct: 603 NLRPPTEAENK--EEERVKEVSGASPQPKQETNLAKTPPFCDFECSPVE------FDKGM 654
Query: 675 QDLQKTISYLVSLYPVEQSPPS-----SSSDLSSLKMSRSASCKAAIVSMQSSLALEKTE 729
+L++ + L P + P S S +K++RS SC+ +++S SS L+K
Sbjct: 655 SNLRRIPTPPALLTPSPEKPFSWLMERDSQPFRRMKLTRSRSCRPSLLSSSSSSWLDKD- 713
Query: 730 NCEDTPTTWSDKNVPEKPGGFNGKLSELKHGPKVRDFDSQTSISAASMEAQSIKEYDADD 789
DTP +W DK K N + ++K+ ++D S S+ E AD
Sbjct: 714 --VDTPPSWYDKEFV-KSVETNLTMCDMKNQRLLQDEFSGRSMPTTWFERNLSDTQTADA 770
Query: 790 ASSIY--EQSENASSLWFEKAVHTPTTMSERSFPITAARTRKFYEFNHSGDIRNFHSKYS 847
AS E S N S P+ S+ S +E SG
Sbjct: 771 ASHGVSNEMSPNES----------PSRPSDAS----------VFELQTSG---------- 800
Query: 848 ETSVSTPSVESRSGKETDTEDSGIHEFVSE-KKEVIKLPSSKTFGDYLVQETGTDYTEGS 906
S+S E +G + D + IH + E +++ + L S+K+F D
Sbjct: 801 RASISQDRTEE-TGAQKDKQ--IIHRSMEEMEQKFLSLSSTKSFKD-------------- 843
Query: 907 MKNAEEAGMDTRKDIIQPLFNWPAEFERQRKEIIELWDACYVPLVHRTYFFLLFKGDPSD 966
A MD +D + NWP EF+R ++EIIELW C V + HR+YFFLLF+GD D
Sbjct: 844 ------AAMDPIQDYLDTPLNWPVEFKRLQREIIELWHVCKVSMAHRSYFFLLFRGDQKD 897
Query: 967 SVYMEVELRRLSFLKGGNITKESF--NSRD--------SLKGLYRERETLSKQVHQKFSR 1016
+Y+EVELRRL ++ +ESF NS D + L RER LSK + +K S+
Sbjct: 898 CLYLEVELRRLKYI------RESFAQNSNDGHNMTLISCTRALTRERYKLSKLMQRKLSK 951
Query: 1017 KEREELYKKWGIALNTKQRSLQLARRIWSSTKDMNHIKESASLVAKLIDFVQPGQAPKEI 1076
+ERE L+ +WGI LNT R +QLA R+WS KDM H++ESASLV KL FV E+
Sbjct: 952 EERENLFLRWGIGLNTSHRRVQLAHRLWSDYKDMGHVRESASLVGKLNGFVDMKLTSTEM 1011
Query: 1077 FGLSFSHGPGSKRRRSYSWRPSRRSSMSV 1105
FG++++ P ++ S W +RS +S+
Sbjct: 1012 FGVNYAFRPPRPKKSSL-W---KRSVLSL 1036
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Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255538834|ref|XP_002510482.1| ATP binding protein, putative [Ricinus communis] gi|223551183|gb|EEF52669.1| ATP binding protein, putative [Ricinus communis] | Back alignment and taxonomy information |
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| >gi|224066026|ref|XP_002301999.1| predicted protein [Populus trichocarpa] gi|222843725|gb|EEE81272.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
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| >gi|359492713|ref|XP_002280678.2| PREDICTED: uncharacterized protein LOC100257491 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|449470116|ref|XP_004152764.1| PREDICTED: uncharacterized protein LOC101212680 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|449520175|ref|XP_004167109.1| PREDICTED: uncharacterized LOC101212680 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|302142596|emb|CBI19799.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359474911|ref|XP_002275329.2| PREDICTED: uncharacterized protein LOC100250389 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|147775817|emb|CAN75924.1| hypothetical protein VITISV_029516 [Vitis vinifera] gi|297744725|emb|CBI37987.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|359476842|ref|XP_003631897.1| PREDICTED: uncharacterized protein LOC100854194 [Vitis vinifera] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1106 | ||||||
| TAIR|locus:2135006 | 1004 | AT4G24170 [Arabidopsis thalian | 0.575 | 0.634 | 0.514 | 4.7e-208 | |
| TAIR|locus:2050115 | 862 | AT2G21300 [Arabidopsis thalian | 0.499 | 0.640 | 0.544 | 3.2e-199 | |
| TAIR|locus:2155051 | 1063 | AT5G66310 [Arabidopsis thalian | 0.386 | 0.402 | 0.649 | 5.8e-193 | |
| TAIR|locus:2120272 | 836 | AT4G38950 [Arabidopsis thalian | 0.586 | 0.776 | 0.477 | 7.2e-191 | |
| TAIR|locus:2014069 | 974 | HIK "HINKEL" [Arabidopsis thal | 0.404 | 0.458 | 0.532 | 1.8e-156 | |
| TAIR|locus:2084701 | 938 | TES "TETRASPORE" [Arabidopsis | 0.395 | 0.465 | 0.534 | 2e-155 | |
| UNIPROTKB|Q8S950 | 959 | nack1 "Kinesin-like protein NA | 0.360 | 0.416 | 0.593 | 3.9e-155 | |
| TAIR|locus:2162351 | 1087 | AT5G42490 [Arabidopsis thalian | 0.575 | 0.585 | 0.370 | 5.4e-145 | |
| DICTYBASE|DDB_G0291039 | 685 | kif11 "kinesin-7" [Dictyosteli | 0.319 | 0.515 | 0.437 | 3.1e-77 | |
| TAIR|locus:2202862 | 823 | ZCF125 [Arabidopsis thaliana ( | 0.366 | 0.492 | 0.380 | 2.2e-69 |
| TAIR|locus:2135006 AT4G24170 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1517 (539.1 bits), Expect = 4.7e-208, Sum P(3) = 4.7e-208
Identities = 351/682 (51%), Positives = 456/682 (66%)
Query: 19 GQEERILVFVRLRPLNEKEYARNDVSDWECINNNSIVFK-NSLLERSVYPPAYTFDRVFG 77
G EE+ILV VR+RPLNEKE RND DWECIN+ +I+ K ++L ++S +YTFD+VFG
Sbjct: 2 GGEEKILVSVRVRPLNEKEKTRNDRCDWECINDTTIICKFHNLPDKS----SYTFDKVFG 57
Query: 78 CECPTRQVYEEAAKEVTLSVVNGINSTFFAYGQTSSGKTYTMGGITEYAIQDIYDYIDTH 137
ECPT+QVY++ AKEV L V++GINS+ FAYGQTSSGKTYTM GITE+A+ DI+ YID H
Sbjct: 58 FECPTKQVYDDGAKEVALCVLSGINSSIFAYGQTSSGKTYTMSGITEFAMDDIFAYIDKH 117
Query: 138 -QEREFVLKFSAMEIYNESVRDLLSTDS-TPLRLLDDPEKGXXXXXXXXXXXXDMSHLME 195
QER+F LKFSAMEIYNE+VRDLL DS TPLRLLDDPE+G D SHL E
Sbjct: 118 KQERKFTLKFSAMEIYNEAVRDLLCEDSSTPLRLLDDPERGTVVEKLREETLRDRSHLEE 177
Query: 196 LLAVCEAQRQIGETALNETSSRSHQILRLTIESSAREYLGAGNSSILSASVNFVDLAGSE 255
LL++CE QR+IGET+LNE SSRSHQILRLTIESS++++ +S+ L+ASV FVDLAGSE
Sbjct: 178 LLSICETQRKIGETSLNEISSRSHQILRLTIESSSQQF-SPESSATLAASVCFVDLAGSE 236
Query: 256 RASQTLNAGARLKEGSHINRSLLTLGTVIRKLSKGRNAHIPYRDSKLTRILQNSLGGNAR 315
RASQTL+AG+RLKEG HINRSLLTLGTVIRKLSKG+N HIPYRDSKLTRILQNSLGGNAR
Sbjct: 237 RASQTLSAGSRLKEGCHINRSLLTLGTVIRKLSKGKNGHIPYRDSKLTRILQNSLGGNAR 296
Query: 316 TAIICTMSPARSHVEQSRNTLLFASCAKEVATNAQVNVVMSDKALVKQLQKELARLENEM 375
TAIICTMSPARSH+EQSRNTLLFA+CAKEV TNAQVN+V+S+KALVKQLQ+ELAR+ENE+
Sbjct: 297 TAIICTMSPARSHLEQSRNTLLFATCAKEVTTNAQVNLVVSEKALVKQLQRELARMENEL 356
Query: 376 KNL--QSTPKKCDF--TLLKEKEQVIEEMDRQIRELTKERDLAKSRVDNLLQSIGEEDQR 431
KNL S DF +LK+KE++I +M+ QI EL +RD+A+SRV+NLL+S EE R
Sbjct: 357 KNLGPASASSTSDFYALMLKQKEELIAKMEEQIHELKWQRDVAQSRVENLLKSTAEE--R 414
Query: 432 SRLDEYSEVESSDIYNPVHSDVGHETYKTSKNIDNSQLDNSSPNFFHLSENQEDNSLLDN 491
S Y+ D E + N+ S L SP+ ED LLD+
Sbjct: 415 SSSSSMDSRRRRISYDSTDFD---EP-RMLNNLGKSNL--YSPD--------EDGFLLDD 460
Query: 492 STPKFVGLDPCQGWDDITRKIDEDSEDTCKEVRCIEMEASTLNR----KSESDVGKFPMT 547
+TP+F G + W+++ + ++ ED CKEVRCIE+ + R S D+ +
Sbjct: 461 TTPQFPGHNLHDKWEEMAQSTTQEPEDACKEVRCIEVNSGEAERVQIQDSLDDIVEKKEY 520
Query: 548 GAMEEAAFSPPSQKVRSIVMEESSMERKTGSDVFSPGPEEKERRSSMTKATYEASELSPR 607
E+ +++I ME S + D S ++ + T+ + E + SP+
Sbjct: 521 EQNYESQKDDADSSIKNIDMELSLYTKPEAEDGVSVKKLIEDVQE--TEQSVEKQKQSPK 578
Query: 608 GDRCIKMEESSINKTTEPDVFLSGTEEEGKLSMTGDIGEVP------VTSPQKEDKGSSP 661
+ +ME+ +++ V S EEE + G ++ + ++ +
Sbjct: 579 KE---EMEQY-LSRDMSEQVTKSLPEEEQCVQEYGAYDKLEAQDVLTINKLEESQQTEQS 634
Query: 662 VDKHDTEA-LKQKIQDLQKTIS 682
V+K DT+ L K +DL++ +S
Sbjct: 635 VEKEDTKKNLSSKKEDLKQNLS 656
|
|
| TAIR|locus:2050115 AT2G21300 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2155051 AT5G66310 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2120272 AT4G38950 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2014069 HIK "HINKEL" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2084701 TES "TETRASPORE" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8S950 nack1 "Kinesin-like protein NACK1" [Nicotiana tabacum (taxid:4097)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2162351 AT5G42490 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| DICTYBASE|DDB_G0291039 kif11 "kinesin-7" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
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| TAIR|locus:2202862 ZCF125 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1106 | |||
| cd01374 | 321 | cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E | 1e-150 | |
| smart00129 | 335 | smart00129, KISc, Kinesin motor, catalytic domain | 1e-126 | |
| pfam00225 | 326 | pfam00225, Kinesin, Kinesin motor domain | 1e-124 | |
| cd00106 | 328 | cd00106, KISc, Kinesin motor domain | 1e-108 | |
| cd01370 | 338 | cd01370, KISc_KIP3_like, Kinesin motor domain, KIP | 1e-100 | |
| cd01369 | 325 | cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine | 4e-94 | |
| cd01372 | 341 | cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik | 4e-85 | |
| cd01371 | 333 | cd01371, KISc_KIF3, Kinesin motor domain, kinesins | 6e-84 | |
| cd01366 | 329 | cd01366, KISc_C_terminal, Kinesin motor domain, KI | 3e-80 | |
| cd01367 | 322 | cd01367, KISc_KIF2_like, Kinesin motor domain, KIF | 6e-80 | |
| cd01364 | 352 | cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC | 2e-79 | |
| cd01365 | 356 | cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K | 2e-77 | |
| pfam11995 | 162 | pfam11995, DUF3490, Domain of unknown function (DU | 1e-75 | |
| cd01373 | 337 | cd01373, KISc_KLP2_like, Kinesin motor domain, KLP | 7e-67 | |
| cd01375 | 334 | cd01375, KISc_KIF9_like, Kinesin motor domain, KIF | 7e-66 | |
| COG5059 | 568 | COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | 3e-65 | |
| cd01376 | 319 | cd01376, KISc_KID_like, Kinesin motor domain, KIF2 | 4e-59 | |
| PLN03188 | 1320 | PLN03188, PLN03188, kinesin-12 family protein; Pro | 4e-55 | |
| cd01368 | 345 | cd01368, KISc_KIF23_like, Kinesin motor domain, KI | 4e-54 | |
| cd01363 | 186 | cd01363, Motor_domain, Myosin and Kinesin motor do | 2e-37 | |
| smart00307 | 200 | smart00307, ILWEQ, I/LWEQ domain | 0.003 |
| >gnl|CDD|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
Score = 450 bits (1161), Expect = e-150
Identities = 182/329 (55%), Positives = 223/329 (67%), Gaps = 16/329 (4%)
Query: 24 ILVFVRLRPLNEKEYARNDVSDWECINNNSIVFKNSLLERSVYPPAYTFDRVFGCECPTR 83
I V VR+RPLN +E N+ W N+N+I LE S ++TFDRVFG E R
Sbjct: 2 IKVSVRVRPLNPRES-DNEQVAWSIDNDNTIS-----LEESTPGQSFTFDRVFGGESTNR 55
Query: 84 QVYEEAAKEVTLSVVNGINSTFFAYGQTSSGKTYTM------GGITEYAIQDIYDYIDTH 137
+VYE AK V S + G N T FAYGQTSSGKT+TM GI A++DI+ I
Sbjct: 56 EVYERIAKPVVRSALEGYNGTIFAYGQTSSGKTFTMSGDEQEPGIIPLAVRDIFQRIQDT 115
Query: 138 QEREFVLKFSAMEIYNESVRDLLSTDSTPLRLLDDPEKGTVVERLTEETLTDMSHLMELL 197
+REF+L+ S +EIYNE ++DLLS LR+ +DP KG VV LTEE +T HL++L+
Sbjct: 116 PDREFLLRVSYLEIYNEKIKDLLSPSPQELRIREDPNKGVVVAGLTEEIVTSPEHLLQLI 175
Query: 198 AVCEAQRQIGETALNETSSRSHQILRLTIESSAREYLGAGNSSILSASVNFVDLAGSERA 257
A E R +GET NE SSRSH I +LTIES R + ++ +++N +DLAGSERA
Sbjct: 176 ARGEKNRHVGETDFNERSSRSHTIFQLTIESRERGDS--ESGTVRVSTLNLIDLAGSERA 233
Query: 258 SQTLNAGARLKEGSHINRSLLTLGTVIRKLSKGRN-AHIPYRDSKLTRILQNSLGGNART 316
SQT AG R KEGS IN+SLLTLGTVI KLS+G+N HIPYRDSKLTRILQ SL GNART
Sbjct: 234 SQTG-AGERRKEGSFINKSLLTLGTVISKLSEGKNSGHIPYRDSKLTRILQPSLSGNART 292
Query: 317 AIICTMSPARSHVEQSRNTLLFASCAKEV 345
AIICT+SPA SHVE++ NTL FAS AK+V
Sbjct: 293 AIICTISPASSHVEETLNTLKFASRAKKV 321
|
This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In most kinesins, the motor domain is found at the N-terminus (N-type). N-type kinesins are (+) end-directed motors, i.e. they transport cargo towards the (+) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 321 |
| >gnl|CDD|214526 smart00129, KISc, Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >gnl|CDD|215803 pfam00225, Kinesin, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238054 cd00106, KISc, Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >gnl|CDD|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >gnl|CDD|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >gnl|CDD|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >gnl|CDD|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >gnl|CDD|221365 pfam11995, DUF3490, Domain of unknown function (DUF3490) | Back alignment and domain information |
|---|
| >gnl|CDD|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >gnl|CDD|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >gnl|CDD|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >gnl|CDD|214607 smart00307, ILWEQ, I/LWEQ domain | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1106 | |||
| KOG0242 | 675 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0243 | 1041 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0245 | 1221 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG4280 | 574 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| PF11995 | 161 | DUF3490: Domain of unknown function (DUF3490); Int | 100.0 | |
| KOG0240 | 607 | consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | 100.0 | |
| PLN03188 | 1320 | kinesin-12 family protein; Provisional | 100.0 | |
| cd01370 | 338 | KISc_KIP3_like Kinesin motor domain, KIP3-like sub | 100.0 | |
| cd01373 | 337 | KISc_KLP2_like Kinesin motor domain, KLP2-like sub | 100.0 | |
| cd01368 | 345 | KISc_KIF23_like Kinesin motor domain, KIF23-like s | 100.0 | |
| KOG0241 | 1714 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01365 | 356 | KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p | 100.0 | |
| cd01371 | 333 | KISc_KIF3 Kinesin motor domain, kinesins II or KIF | 100.0 | |
| cd01364 | 352 | KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind | 100.0 | |
| cd01367 | 322 | KISc_KIF2_like Kinesin motor domain, KIF2-like gro | 100.0 | |
| cd01374 | 321 | KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like | 100.0 | |
| cd01369 | 325 | KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy | 100.0 | |
| cd01376 | 319 | KISc_KID_like Kinesin motor domain, KIF22/Kid-like | 100.0 | |
| cd01372 | 341 | KISc_KIF4 Kinesin motor domain, KIF4-like subfamil | 100.0 | |
| cd01375 | 334 | KISc_KIF9_like Kinesin motor domain, KIF9-like sub | 100.0 | |
| cd01366 | 329 | KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ | 100.0 | |
| smart00129 | 335 | KISc Kinesin motor, catalytic domain. ATPase. Micr | 100.0 | |
| cd00106 | 328 | KISc Kinesin motor domain. This catalytic (head) d | 100.0 | |
| KOG0239 | 670 | consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | 100.0 | |
| PF00225 | 335 | Kinesin: Kinesin motor domain; InterPro: IPR001752 | 100.0 | |
| KOG0246 | 676 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0247 | 809 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| KOG0244 | 913 | consensus Kinesin-like protein [Cytoskeleton] | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 100.0 | |
| cd01363 | 186 | Motor_domain Myosin and Kinesin motor domain. Thes | 100.0 | |
| COG5059 | 568 | KIP1 Kinesin-like protein [Cytoskeleton] | 97.63 | |
| COG0556 | 663 | UvrB Helicase subunit of the DNA excision repair c | 94.27 | |
| PF00308 | 219 | Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 | 92.52 | |
| PRK06893 | 229 | DNA replication initiation factor; Validated | 91.97 | |
| COG2805 | 353 | PilT Tfp pilus assembly protein, pilus retraction | 88.67 | |
| PRK06620 | 214 | hypothetical protein; Validated | 87.97 | |
| PRK14086 | 617 | dnaA chromosomal replication initiation protein; P | 87.28 | |
| PRK08084 | 235 | DNA replication initiation factor; Provisional | 86.13 | |
| PRK12377 | 248 | putative replication protein; Provisional | 86.06 | |
| PRK10884 | 206 | SH3 domain-containing protein; Provisional | 85.76 | |
| PRK06526 | 254 | transposase; Provisional | 85.44 | |
| PRK09087 | 226 | hypothetical protein; Validated | 85.16 | |
| PRK14088 | 440 | dnaA chromosomal replication initiation protein; P | 84.64 | |
| PRK05642 | 234 | DNA replication initiation factor; Validated | 84.48 | |
| PRK08116 | 268 | hypothetical protein; Validated | 83.91 | |
| PRK08727 | 233 | hypothetical protein; Validated | 83.88 | |
| TIGR00362 | 405 | DnaA chromosomal replication initiator protein Dna | 83.36 | |
| COG1474 | 366 | CDC6 Cdc6-related protein, AAA superfamily ATPase | 83.35 | |
| PRK07952 | 244 | DNA replication protein DnaC; Validated | 82.52 | |
| PRK00149 | 450 | dnaA chromosomal replication initiation protein; R | 82.15 | |
| PF04851 | 184 | ResIII: Type III restriction enzyme, res subunit; | 81.89 | |
| TIGR03420 | 226 | DnaA_homol_Hda DnaA regulatory inactivator Hda. Me | 81.48 | |
| PRK00411 | 394 | cdc6 cell division control protein 6; Reviewed | 80.95 | |
| TIGR02928 | 365 | orc1/cdc6 family replication initiation protein. M | 80.76 |
| >KOG0242 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-84 Score=777.12 Aligned_cols=397 Identities=55% Similarity=0.815 Sum_probs=360.9
Q ss_pred CCCCCEEEEEEeCCCChhhhhcCCCcceEEecCceEEecCCC--ccCCCCCCceecceecCCCCChHHHHHHHHHHHHHH
Q 001290 19 GQEERILVFVRLRPLNEKEYARNDVSDWECINNNSIVFKNSL--LERSVYPPAYTFDRVFGCECPTRQVYEEAAKEVTLS 96 (1106)
Q Consensus 19 ~~eerIrV~VRVRPl~~~E~~~~~~~~~~~i~~~tIv~~~~~--~~~s~~~~~F~FD~VF~~~atQeeVYe~vv~plV~s 96 (1106)
+..++|.|+|||||+++++...++.+.|.|.++..+...... +.+.. +..|.||+||+++++|++||+..++|||++
T Consensus 3 ~~~~~i~V~vrvRP~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~-~~~y~FD~VF~~~~t~~~VYe~~tkpiv~~ 81 (675)
T KOG0242|consen 3 GTEEKILVSVRVRPLNEREDARGDRSDWHCINDTTLFKRVTKSLPEKSK-PEKYEFDRVFGEESTQEDVYERTTKPLLLS 81 (675)
T ss_pred CccceeEEEEEeCCCCccccccCCccceEecCCceeEeecccccccccc-ccceeeeeecCCCCCHHHHHHhccHHHHHH
Confidence 356799999999999999888899999999999998766422 23322 689999999999999999999999999999
Q ss_pred hhcCCCcceeeeccCCCCCccccC------CChHhHHHHHHHhhhccccceEEEEeeEEEEecccccccCCCCCCCceee
Q 001290 97 VVNGINSTFFAYGQTSSGKTYTMG------GITEYAIQDIYDYIDTHQEREFVLKFSAMEIYNESVRDLLSTDSTPLRLL 170 (1106)
Q Consensus 97 vL~G~NatIfAYGQTGSGKTyTM~------GIi~rai~dLF~~I~~~~~~~f~V~vS~lEIYNE~V~DLLs~~s~~L~i~ 170 (1106)
|+.|||++|||||||||||||||. ||+|+++.+||++|....++.|.|.|||+|||||.|+|||+++..+++++
T Consensus 82 ~l~G~N~TVFAYG~TgSGKTyTM~G~~~~PGii~la~~dif~~I~~~~~r~f~v~vSYlEIYNE~I~DLL~~~~~~L~ir 161 (675)
T KOG0242|consen 82 VLEGFNATVFAYGQTGSGKTYTMSGSEDDPGIIPLAMKDIFEKIDKSGEREFSVRVSYLEIYNERIRDLLNPDGGDLRLR 161 (675)
T ss_pred HhcCcccceeeecCCCCCCceEEeccCCCCCeeehHHHHHHHHHHhcCCceeEEEEEEEEEeccccccccCCCCCCceEe
Confidence 999999999999999999999996 68899999999999999999999999999999999999999999999999
Q ss_pred eCCCCCeEecCceEEEecCHHHHHHHHHHHHhhccccccccCCCCCCceEEEEEEEEeecccccCCCCceeEEEeEEEEe
Q 001290 171 DDPEKGTVVERLTEETLTDMSHLMELLAVCEAQRQIGETALNETSSRSHQILRLTIESSAREYLGAGNSSILSASVNFVD 250 (1106)
Q Consensus 171 ed~~~g~~V~gLtev~V~S~eE~l~LL~~G~~~R~~asT~~N~~SSRSHaIftI~Ie~~~~e~~~~~~~~~~~SkL~fVD 250 (1106)
+|+.+|++|.||+++.|.|+++++++|..|+.+|+++.|++|..|||||+||+|.|.+..+... . ..++|+|||
T Consensus 162 ED~~~gi~V~gL~e~~v~s~e~~~~ll~~g~~~R~~g~T~~N~~SSRSHaIl~i~i~s~~~~~~-----~-~~s~L~lID 235 (675)
T KOG0242|consen 162 EDSEGGIVVPGLTEETVSSREELLELLQKGNKNRTTGETNLNEQSSRSHAILRITVESRGREAS-----S-RVSKLNLID 235 (675)
T ss_pred EcCCCCEEecCCeeecCCCHHHHHHHHHHhhccCcccccccccccchhhheeeEEEEecccccc-----c-hhheehhhh
Confidence 9999999999999999999999999999999999999999999999999999999998876532 2 778999999
Q ss_pred cCCCccccccccccccccccccchhhHHHHHHHHHHhcCC-CCCccCCCCChhhHhhhhccCCCceeeEEEecCCCCcch
Q 001290 251 LAGSERASQTLNAGARLKEGSHINRSLLTLGTVIRKLSKG-RNAHIPYRDSKLTRILQNSLGGNARTAIICTMSPARSHV 329 (1106)
Q Consensus 251 LAGSER~~kt~s~G~rlkEg~~INkSLlaLg~VI~aLs~g-k~~hIPYRDSKLTrLLqdsLGGNSkT~mI~tISPs~~~~ 329 (1106)
||||||+.++++.|.|++||++||+||++||+||++|+.+ ...||||||||||||||++|||||+|+|||||+|+..|+
T Consensus 236 LAGSERas~T~~~G~RlkEG~~INrSLlaLgtVI~~Ls~~~~~~hipYRDSKLTRiLq~sLgGn~rt~~I~tisp~~~~~ 315 (675)
T KOG0242|consen 236 LAGSERASRTGNEGVRLKEGAHINRSLLALGTVINKLSEGKRPRHIPYRDSKLTRLLQDSLGGNARTAIIATISPSSSHY 315 (675)
T ss_pred hhhhhhhhhhhccceeccccchhhHHHHHHHHHHHHHccccccCCCCccccHHHHhchhhcCCCccEEEEEEeCchhhHH
Confidence 9999999999999999999999999999999999999998 567999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhcccccccccccCHHHHHHHHHHHHHHHHHHHHhhcCCCCcchhhHHHHHHHHHHHHH-HHHHHHH
Q 001290 330 EQSRNTLLFASCAKEVATNAQVNVVMSDKALVKQLQKELARLENEMKNLQSTPKKCDFTLLKEKEQVIEEMD-RQIRELT 408 (1106)
Q Consensus 330 eETLsTLrFAsrAK~Ikn~p~vN~~~sd~alik~Lq~Ei~rLe~eL~~l~~~~~~~~~~ll~e~~~~i~ele-~~i~EL~ 408 (1106)
+||.+||+||+|||.|++++++|+.+.++.+++.+++++..|+.++..++...... ......+..++ +++.++.
T Consensus 316 ~eT~nTL~fAsrak~i~~~~~~n~~~~~~~~~~~~~~~i~~l~~e~~~~~~~~~~~-----~~~~~~~~~~e~~~~~~~~ 390 (675)
T KOG0242|consen 316 EETKNTLKFASRAKEITTKAQVNVILSDKALLKYLQREIAELEAELERLKKKLEPE-----REQELLIQKLEKEEVEELL 390 (675)
T ss_pred HHHHHHHHHHHHhhhcccccccceecchhhhhHHHHHHHHHHHHHHHhhccccccc-----hhhHHHHhHhhhhhHhhhh
Confidence 99999999999999999999999999999999999999999999999877654332 14455566666 7777777
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 001290 409 KERDLAKSRVDNLLQSIGE 427 (1106)
Q Consensus 409 ~erd~~~~~i~~L~q~~~~ 427 (1106)
.+++.++...+.+.+....
T Consensus 391 ~~~~~~~~~~~~~~~~~~~ 409 (675)
T KOG0242|consen 391 PQRSEIQSLVELLKRLSAS 409 (675)
T ss_pred hhhhHHHHHHHHHhhhccc
Confidence 7777777777766655443
|
|
| >KOG0243 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0245 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG4280 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF11995 DUF3490: Domain of unknown function (DUF3490); InterPro: IPR021881 This presumed domain is functionally uncharacterised | Back alignment and domain information |
|---|
| >KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PLN03188 kinesin-12 family protein; Provisional | Back alignment and domain information |
|---|
| >cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup | Back alignment and domain information |
|---|
| >cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup | Back alignment and domain information |
|---|
| >cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup | Back alignment and domain information |
|---|
| >KOG0241 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins | Back alignment and domain information |
|---|
| >cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins | Back alignment and domain information |
|---|
| >cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division | Back alignment and domain information |
|---|
| >cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group | Back alignment and domain information |
|---|
| >cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis | Back alignment and domain information |
|---|
| >cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup | Back alignment and domain information |
|---|
| >cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup | Back alignment and domain information |
|---|
| >cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily | Back alignment and domain information |
|---|
| >cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling | Back alignment and domain information |
|---|
| >cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins | Back alignment and domain information |
|---|
| >smart00129 KISc Kinesin motor, catalytic domain | Back alignment and domain information |
|---|
| >cd00106 KISc Kinesin motor domain | Back alignment and domain information |
|---|
| >KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton] | Back alignment and domain information |
|---|
| >PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport | Back alignment and domain information |
|---|
| >KOG0246 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0247 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >KOG0244 consensus Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >cd01363 Motor_domain Myosin and Kinesin motor domain | Back alignment and domain information |
|---|
| >COG5059 KIP1 Kinesin-like protein [Cytoskeleton] | Back alignment and domain information |
|---|
| >COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair] | Back alignment and domain information |
|---|
| >PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication | Back alignment and domain information |
|---|
| >PRK06893 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
| >PRK06620 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14086 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK08084 DNA replication initiation factor; Provisional | Back alignment and domain information |
|---|
| >PRK12377 putative replication protein; Provisional | Back alignment and domain information |
|---|
| >PRK10884 SH3 domain-containing protein; Provisional | Back alignment and domain information |
|---|
| >PRK06526 transposase; Provisional | Back alignment and domain information |
|---|
| >PRK09087 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK14088 dnaA chromosomal replication initiation protein; Provisional | Back alignment and domain information |
|---|
| >PRK05642 DNA replication initiation factor; Validated | Back alignment and domain information |
|---|
| >PRK08116 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >PRK08727 hypothetical protein; Validated | Back alignment and domain information |
|---|
| >TIGR00362 DnaA chromosomal replication initiator protein DnaA | Back alignment and domain information |
|---|
| >COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
| >PRK07952 DNA replication protein DnaC; Validated | Back alignment and domain information |
|---|
| >PRK00149 dnaA chromosomal replication initiation protein; Reviewed | Back alignment and domain information |
|---|
| >PF04851 ResIII: Type III restriction enzyme, res subunit; InterPro: IPR006935 This entry represents a domain found in the N terminus of several proteins, including helicases, the R subunit (HsdR) of type I restriction endonucleases (3 | Back alignment and domain information |
|---|
| >TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda | Back alignment and domain information |
|---|
| >PRK00411 cdc6 cell division control protein 6; Reviewed | Back alignment and domain information |
|---|
| >TIGR02928 orc1/cdc6 family replication initiation protein | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1106 | ||||
| 1t5c_A | 349 | Crystal Structure Of The Motor Domain Of Human Kine | 4e-63 | ||
| 3b6u_A | 372 | Crystal Structure Of The Motor Domain Of Human Kine | 1e-59 | ||
| 1mkj_A | 349 | Human Kinesin Motor Domain With Docked Neck Linker | 2e-52 | ||
| 3b6v_A | 395 | Crystal Structure Of The Motor Domain Of Human Kine | 3e-52 | ||
| 4atx_C | 340 | Rigor Kinesin Motor Domain With An Ordered Neck-Lin | 2e-51 | ||
| 1bg2_A | 325 | Human Ubiquitous Kinesin Motor Domain Length = 325 | 3e-51 | ||
| 2y5w_A | 365 | Crystal Structure Of Drosophila Melanogaster Kinesi | 3e-51 | ||
| 2vvg_A | 350 | Crystal Structure Of The G.Intestinalis Kinesin 2 G | 9e-49 | ||
| 2wbe_C | 373 | Kinesin-5-Tubulin Complex With Amppnp Length = 373 | 4e-48 | ||
| 4aqv_C | 373 | Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma | 2e-47 | ||
| 4ap0_A | 370 | The Mitotic Kinesin Eg5 In Complex With Mg-Adp And | 7e-47 | ||
| 1ii6_A | 368 | Crystal Structure Of The Mitotic Kinesin Eg5 In Com | 7e-47 | ||
| 4a1z_A | 368 | Eg5-1 Length = 368 | 9e-47 | ||
| 1q0b_A | 367 | Crystal Structure Of The Motor Protein Ksp In Compl | 9e-47 | ||
| 1x88_A | 359 | Human Eg5 Motor Domain Bound To Mg-Adp And Monastro | 1e-46 | ||
| 3hqd_A | 369 | Human Kinesin Eg5 Motor Domain In Complex With Ampp | 1e-46 | ||
| 4a28_A | 368 | Eg5-2 Length = 368 | 1e-46 | ||
| 1goj_A | 355 | Structure Of A Fast Kinesin: Implications For Atpas | 1e-46 | ||
| 3zcw_A | 348 | Eg5 - New Allosteric Binding Site Length = 348 | 2e-45 | ||
| 3lre_A | 355 | Crystal Structure Analysis Of Human Kinesin-8 Motor | 3e-45 | ||
| 4a14_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 4e-45 | ||
| 3h4s_A | 386 | Structure Of The Complex Of A Mitotic Kinesin With | 8e-44 | ||
| 1sdm_A | 369 | Crystal Structure Of Kinesin-Like Calmodulin Bindin | 3e-43 | ||
| 2xt3_A | 344 | Human Kif7, A Kinesin Involved In Hedgehog Signalli | 6e-42 | ||
| 1ia0_K | 394 | Kif1a Head-Microtubule Complex Structure In Atp-For | 5e-41 | ||
| 1i5s_A | 367 | Crystal Structure Of The Kif1a Motor Domain Complex | 1e-40 | ||
| 1i6i_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-40 | ||
| 1vfv_A | 366 | Crystal Structure Of The Kif1a Motor Domain Complex | 2e-40 | ||
| 3gbj_A | 354 | Crystal Structure Of The Motor Domain Of Kinesin Ki | 2e-40 | ||
| 2h58_A | 330 | Crystal Structure Of The Kifc3 Motor Domain In Comp | 3e-38 | ||
| 2owm_A | 443 | Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3 | 4e-38 | ||
| 2gry_A | 420 | Crystal Structure Of The Human Kif2 Motor Domain In | 1e-36 | ||
| 2heh_A | 387 | Crystal Structure Of The Kif2c Motor Domain (Casp T | 5e-36 | ||
| 1v8j_A | 410 | The Crystal Structure Of The Minimal Functional Dom | 8e-36 | ||
| 4etp_A | 403 | C-Terminal Motor And Motor Homology Domain Of Kar3v | 2e-35 | ||
| 3nwn_A | 359 | Crystal Structure Of The Human Kif9 Motor Domain In | 2e-35 | ||
| 3bfn_A | 388 | Crystal Structure Of The Motor Domain Of Human Kine | 5e-35 | ||
| 4gkr_A | 371 | Structure Of The C-Terminal Motor Domain Of Kar3 Fr | 1e-34 | ||
| 3edl_D | 331 | Kinesin13-Microtubule Ring Complex Length = 331 | 5e-34 | ||
| 1f9t_A | 358 | Crystal Structures Of Kinesin Mutants Reveal A Sign | 9e-34 | ||
| 3kar_A | 346 | The Motor Domain Of Kinesin-Like Protein Kar3, A Sa | 9e-34 | ||
| 2rep_A | 376 | Crystal Structure Of The Motor Domain Of Human Kine | 2e-33 | ||
| 2ncd_A | 420 | Ncd (Non-Claret Disjunctional) Dimer From D. Melano | 2e-33 | ||
| 3u06_A | 412 | Crystal Structure Of The Kinesin-14 Ncdg347d Length | 3e-33 | ||
| 1cz7_A | 406 | The Crystal Structure Of A Minus-End Directed Micro | 3e-33 | ||
| 1f9w_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 4e-33 | ||
| 4h1g_A | 715 | Structure Of Candida Albicans Kar3 Motor Domain Fus | 5e-33 | ||
| 1f9u_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 5e-33 | ||
| 1f9v_A | 347 | Crystal Structures Of Mutants Reveal A Signalling P | 6e-33 | ||
| 3l1c_A | 383 | Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | 7e-33 | ||
| 1n6m_A | 409 | Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY | 2e-32 | ||
| 1ry6_A | 360 | Crystal Structure Of Internal Kinesin Motor Domain | 8e-32 | ||
| 3t0q_A | 349 | Motor Domain Structure Of The Kar3-Like Kinesin Fro | 9e-31 | ||
| 3dc4_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 1e-26 | ||
| 3pxn_A | 344 | Crystal Structure Of The Drosophila Kinesin Family | 2e-26 | ||
| 2kin_A | 238 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 7e-26 | ||
| 3kin_B | 117 | Kinesin (Dimeric) From Rattus Norvegicus Length = 1 | 5e-15 | ||
| 2kin_B | 100 | Kinesin (Monomeric) From Rattus Norvegicus Length = | 7e-15 |
| >pdb|1T5C|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinetochore Protein Cenp-E Length = 349 | Back alignment and structure |
|
| >pdb|3B6U|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3b In Complex With Adp Length = 372 | Back alignment and structure |
| >pdb|1MKJ|A Chain A, Human Kinesin Motor Domain With Docked Neck Linker Length = 349 | Back alignment and structure |
| >pdb|3B6V|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 3c In Complex With Adp Length = 395 | Back alignment and structure |
| >pdb|4ATX|C Chain C, Rigor Kinesin Motor Domain With An Ordered Neck-Linker, Docked On Tubulin Dimer, Modelled Into The 8a Cryo-Em Map Of Doublecortin-Microtubules Decorated With Kinesin Length = 340 | Back alignment and structure |
| >pdb|1BG2|A Chain A, Human Ubiquitous Kinesin Motor Domain Length = 325 | Back alignment and structure |
| >pdb|2Y5W|A Chain A, Crystal Structure Of Drosophila Melanogaster Kinesin-1 Motor Domain Dimer Length = 365 | Back alignment and structure |
| >pdb|2VVG|A Chain A, Crystal Structure Of The G.Intestinalis Kinesin 2 Gikin2a Motor Domain Length = 350 | Back alignment and structure |
| >pdb|2WBE|C Chain C, Kinesin-5-Tubulin Complex With Amppnp Length = 373 | Back alignment and structure |
| >pdb|4AQV|C Chain C, Model Of Human Kinesin-5 Motor Domain (3hqd) And Mammalian Tubulin Heterodimer (1jff) Docked Into The 9.7-angstrom Cryo-em Map Of Microtubule-bound Kinesin-5 Motor Domain In The Ampppnp State. Length = 373 | Back alignment and structure |
| >pdb|4AP0|A Chain A, The Mitotic Kinesin Eg5 In Complex With Mg-Adp And Ispinesib Length = 370 | Back alignment and structure |
| >pdb|1II6|A Chain A, Crystal Structure Of The Mitotic Kinesin Eg5 In Complex With Mg-Adp. Length = 368 | Back alignment and structure |
| >pdb|4A1Z|A Chain A, Eg5-1 Length = 368 | Back alignment and structure |
| >pdb|1Q0B|A Chain A, Crystal Structure Of The Motor Protein Ksp In Complex With Adp And Monastrol Length = 367 | Back alignment and structure |
| >pdb|1X88|A Chain A, Human Eg5 Motor Domain Bound To Mg-Adp And Monastrol Length = 359 | Back alignment and structure |
| >pdb|3HQD|A Chain A, Human Kinesin Eg5 Motor Domain In Complex With Amppnp And Mg2+ Length = 369 | Back alignment and structure |
| >pdb|4A28|A Chain A, Eg5-2 Length = 368 | Back alignment and structure |
| >pdb|1GOJ|A Chain A, Structure Of A Fast Kinesin: Implications For Atpase Mechanism And Interactions With Microtubules Length = 355 | Back alignment and structure |
| >pdb|3ZCW|A Chain A, Eg5 - New Allosteric Binding Site Length = 348 | Back alignment and structure |
| >pdb|3LRE|A Chain A, Crystal Structure Analysis Of Human Kinesin-8 Motor Domain Length = 355 | Back alignment and structure |
| >pdb|4A14|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|3H4S|A Chain A, Structure Of The Complex Of A Mitotic Kinesin With Its Calcium Binding Regulator Length = 386 | Back alignment and structure |
| >pdb|1SDM|A Chain A, Crystal Structure Of Kinesin-Like Calmodulin Binding Protein Length = 369 | Back alignment and structure |
| >pdb|2XT3|A Chain A, Human Kif7, A Kinesin Involved In Hedgehog Signalling Length = 344 | Back alignment and structure |
| >pdb|1IA0|K Chain K, Kif1a Head-Microtubule Complex Structure In Atp-Form Length = 394 | Back alignment and structure |
| >pdb|1I5S|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Adp Length = 367 | Back alignment and structure |
| >pdb|1I6I|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppcp Length = 366 | Back alignment and structure |
| >pdb|1VFV|A Chain A, Crystal Structure Of The Kif1a Motor Domain Complexed With Mg-Amppnp Length = 366 | Back alignment and structure |
| >pdb|3GBJ|A Chain A, Crystal Structure Of The Motor Domain Of Kinesin Kif13b Bound With Adp Length = 354 | Back alignment and structure |
| >pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330 | Back alignment and structure |
| >pdb|2OWM|A Chain A, Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3) Length = 443 | Back alignment and structure |
| >pdb|2GRY|A Chain A, Crystal Structure Of The Human Kif2 Motor Domain In Complex With Adp Length = 420 | Back alignment and structure |
| >pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target) Length = 387 | Back alignment and structure |
| >pdb|1V8J|A Chain A, The Crystal Structure Of The Minimal Functional Domain Of The Microtubule Destabilizer Kif2c Complexed With Mg-adp Length = 410 | Back alignment and structure |
| >pdb|4ETP|A Chain A, C-Terminal Motor And Motor Homology Domain Of Kar3vik1 Fused To A Synthetic Heterodimeric Coiled Coil Length = 403 | Back alignment and structure |
| >pdb|3NWN|A Chain A, Crystal Structure Of The Human Kif9 Motor Domain In Complex With Adp Length = 359 | Back alignment and structure |
| >pdb|3BFN|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member 22 Length = 388 | Back alignment and structure |
| >pdb|4GKR|A Chain A, Structure Of The C-Terminal Motor Domain Of Kar3 From Candida Glabrata Length = 371 | Back alignment and structure |
| >pdb|3EDL|D Chain D, Kinesin13-Microtubule Ring Complex Length = 331 | Back alignment and structure |
| >pdb|1F9T|A Chain A, Crystal Structures Of Kinesin Mutants Reveal A Signalling Pathway For Activation Of The Motor Atpase Length = 358 | Back alignment and structure |
| >pdb|3KAR|A Chain A, The Motor Domain Of Kinesin-Like Protein Kar3, A Saccharomyces Cerevisiae Kinesin-Related Protein Length = 346 | Back alignment and structure |
| >pdb|2REP|A Chain A, Crystal Structure Of The Motor Domain Of Human Kinesin Family Member C1 Length = 376 | Back alignment and structure |
| >pdb|2NCD|A Chain A, Ncd (Non-Claret Disjunctional) Dimer From D. Melanogaster Length = 420 | Back alignment and structure |
| >pdb|3U06|A Chain A, Crystal Structure Of The Kinesin-14 Ncdg347d Length = 412 | Back alignment and structure |
| >pdb|1CZ7|A Chain A, The Crystal Structure Of A Minus-End Directed Microtubule Motor Protein Ncd Reveals Variable Dimer Conformations Length = 406 | Back alignment and structure |
| >pdb|1F9W|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|4H1G|A Chain A, Structure Of Candida Albicans Kar3 Motor Domain Fused To Maltose- Binding Protein Length = 715 | Back alignment and structure |
| >pdb|1F9U|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|1F9V|A Chain A, Crystal Structures Of Mutants Reveal A Signalling Pathway For Activation Of The Kinesin Motor Atpase Length = 347 | Back alignment and structure |
| >pdb|3L1C|A Chain A, Kinesin-14 Protein Ncd, T436s Mutant Length = 383 | Back alignment and structure |
| >pdb|1N6M|A Chain A, Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRYSTAL Structure Of The Kinesin Motor Protein, Ncd Length = 409 | Back alignment and structure |
| >pdb|1RY6|A Chain A, Crystal Structure Of Internal Kinesin Motor Domain Length = 360 | Back alignment and structure |
| >pdb|3T0Q|A Chain A, Motor Domain Structure Of The Kar3-Like Kinesin From Ashbya Gossypii Length = 349 | Back alignment and structure |
| >pdb|3DC4|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Nod In Complex With Adp Length = 344 | Back alignment and structure |
| >pdb|3PXN|A Chain A, Crystal Structure Of The Drosophila Kinesin Family Member Kin10NOD IN Complex With Divalent Manganese And Adp Length = 344 | Back alignment and structure |
| >pdb|2KIN|A Chain A, Kinesin (Monomeric) From Rattus Norvegicus Length = 238 | Back alignment and structure |
| >pdb|3KIN|B Chain B, Kinesin (Dimeric) From Rattus Norvegicus Length = 117 | Back alignment and structure |
| >pdb|2KIN|B Chain B, Kinesin (Monomeric) From Rattus Norvegicus Length = 100 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 479 bits (1236), Expect = e-161
Identities = 149/356 (41%), Positives = 205/356 (57%), Gaps = 17/356 (4%)
Query: 19 GQEERILVFVRLRPLNEKEYARNDVSDWECINNNSIVFKNSLLERSVYPPAYTFDRVFGC 78
+E + V VR+RPLN +E + + + +N+++++ ++ FDRVF
Sbjct: 1 AEEGAVAVCVRVRPLNSREESLGETAQVYWKTDNNVIYQVDG------SKSFNFDRVFHG 54
Query: 79 ECPTRQVYEEAAKEVTLSVVNGINSTFFAYGQTSSGKTYTMGGITEY------AIQDIYD 132
T+ VYEE A + S + G N T FAYGQT+SGKTYTM G ++ AI DI+
Sbjct: 55 NETTKNVYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQ 114
Query: 133 YIDTHQEREFVLKFSAMEIYNESVRDLL--STDSTPLRLLDDPEKGTVVERLTEETLTDM 190
I +REF+L+ S MEIYNE++ DLL + PL + +D + V LTEE +
Sbjct: 115 KIKKFPDREFLLRVSYMEIYNETITDLLCGTQKMKPLIIREDVNRNVYVADLTEEVVYTS 174
Query: 191 SHLMELLAVCEAQRQIGETALNETSSRSHQILRLTIESSAREYLGAGNSSILSASVNFVD 250
++ + E R GET +N+ SSRSH I R+ +ES + S+ + +N VD
Sbjct: 175 EMALKWITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVD 234
Query: 251 LAGSERASQTLNAGARLKEGSHINRSLLTLGTVIRKLSKGRNA-HIPYRDSKLTRILQNS 309
LAGSERA+QT AG RLKEG +INRSL LG VI+KLS G+ I YRDSKLTRILQNS
Sbjct: 235 LAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNS 294
Query: 310 LGGNARTAIICTMSPARSHVEQSRNTLLFASCAKEVATNAQVNVVMSDKALVKQLQ 365
LGGNA+T IICT++P +++ L FAS AK + VN V +D+
Sbjct: 295 LGGNAKTRIICTITPV--SFDETLTALQFASTAKYMKNTPYVNEVSTDELEHHHHH 348
|
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* Length = 365 | Back alignment and structure |
|---|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* Length = 372 | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} Length = 388 | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 Length = 355 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} PDB: 2xt3_A* Length = 344 | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* Length = 325 | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} Length = 350 | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 Length = 360 | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} Length = 355 | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} Length = 373 | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* Length = 369 | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... Length = 359 | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* Length = 366 | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* Length = 387 | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* Length = 410 | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} Length = 354 | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} Length = 443 | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* Length = 344 | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* Length = 412 | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} Length = 330 | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* Length = 347 | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} Length = 349 | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} Length = 403 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} Length = 376 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 Length = 117 | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 Length = 100 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1106 | |||
| 2y65_A | 365 | Kinesin, kinesin heavy chain; motor protein; HET: | 100.0 | |
| 3b6u_A | 372 | Kinesin-like protein KIF3B; structural genomics co | 100.0 | |
| 1goj_A | 355 | Kinesin, kinesin heavy chain; motor protein, ATPas | 100.0 | |
| 1t5c_A | 349 | CENP-E protein, centromeric protein E; kinesin mot | 100.0 | |
| 3bfn_A | 388 | Kinesin-like protein KIF22; limited proteolysis, s | 100.0 | |
| 2vvg_A | 350 | Kinesin-2; motor protein, nucleotide-binding, micr | 100.0 | |
| 3cob_A | 369 | Kinesin heavy chain-like protein; motor, switch II | 100.0 | |
| 1x88_A | 359 | Kinesin-like protein KIF11; switch II, motor domai | 100.0 | |
| 1bg2_A | 325 | Kinesin; motor protein, ATPase, microtubule associ | 100.0 | |
| 2wbe_C | 373 | Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mit | 100.0 | |
| 2zfi_A | 366 | Kinesin-like protein KIF1A, kinesin heavy chain is | 100.0 | |
| 2owm_A | 443 | Nckin3-434, related to kinesin-like protein KIF1C; | 100.0 | |
| 3lre_A | 355 | Kinesin-like protein KIF18A; motor protein, nucleo | 100.0 | |
| 4a14_A | 344 | Kinesin, kinesin-like protein KIF7; motor protein, | 100.0 | |
| 3gbj_A | 354 | KIF13B protein; kinesin, motor domain, ADP, struct | 100.0 | |
| 3nwn_A | 359 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 2heh_A | 387 | KIF2C protein; kinesin, motor domain, ADP, structu | 100.0 | |
| 2h58_A | 330 | Kinesin-like protein KIFC3 variant; motor domain, | 100.0 | |
| 1v8k_A | 410 | Kinesin-like protein KIF2C; microtubule destabiliz | 100.0 | |
| 3t0q_A | 349 | AGR253WP; kinesin, alpha and beta proteins, P-loop | 100.0 | |
| 1ry6_A | 360 | Internal kinesin; kinesin motor domain, nucleotide | 100.0 | |
| 2rep_A | 376 | Kinesin-like protein KIFC1; structural genomics co | 100.0 | |
| 2nr8_A | 358 | Kinesin-like protein KIF9; motor domain, ADP, stru | 100.0 | |
| 1f9v_A | 347 | Kinesin-like protein KAR3; kinesin-related protein | 100.0 | |
| 3u06_A | 412 | Protein claret segregational; motor domain, stalk | 100.0 | |
| 3dc4_A | 344 | Kinesin-like protein NOD; catalytic domain, ATPase | 100.0 | |
| 4etp_A | 403 | Kinesin-like protein KAR3; kinesin motor protein, | 100.0 | |
| 4h1g_A | 715 | Maltose binding protein-cakar3 motor domain fusio; | 100.0 | |
| 2kin_B | 100 | Kinesin; motor protein, cytoskeleton; HET: ADP; 2. | 99.95 | |
| 3kin_B | 117 | Kinesin heavy chain; motor protein, cytoskeleton; | 99.94 | |
| 2o0a_A | 298 | S.cerevisiae chromosome XVI reading frame ORF YPL2 | 99.86 | |
| 3ec2_A | 180 | DNA replication protein DNAC; helicase loader, rep | 91.19 | |
| 2w58_A | 202 | DNAI, primosome component (helicase loader); ATP-b | 89.45 | |
| 2qgz_A | 308 | Helicase loader, putative primosome component; str | 88.44 | |
| 2bjv_A | 265 | PSP operon transcriptional activator; AAA, transcr | 83.28 | |
| 2r62_A | 268 | Cell division protease FTSH homolog; ATPase domain | 83.14 |
| >2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=9.1e-85 Score=736.42 Aligned_cols=341 Identities=39% Similarity=0.552 Sum_probs=290.8
Q ss_pred CCCCCCEEEEEEeCCCChhhhhcCCCcceEEec---CceEEecCCCccCCCCCCceecceecCCCCChHHHHHHHHHHHH
Q 001290 18 AGQEERILVFVRLRPLNEKEYARNDVSDWECIN---NNSIVFKNSLLERSVYPPAYTFDRVFGCECPTRQVYEEAAKEVT 94 (1106)
Q Consensus 18 ~~~eerIrV~VRVRPl~~~E~~~~~~~~~~~i~---~~tIv~~~~~~~~s~~~~~F~FD~VF~~~atQeeVYe~vv~plV 94 (1106)
.+..++|+|+||+||++..|...+....+.+.+ ..++.+. .+.|.||+||+++++|++||+.++.|+|
T Consensus 7 ~~~~~~i~V~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~i~~~---------~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv 77 (365)
T 2y65_A 7 IPAEDSIKVVCRFRPLNDSEEKAGSKFVVKFPNNVEENCISIA---------GKVYLFDKVFKPNASQEKVYNEAAKSIV 77 (365)
T ss_dssp -CCEEECEEEEEECCCCHHHHHTTCCBCEECCSSSTTCEEEET---------TEEEECSEEECTTCCHHHHHHHHTHHHH
T ss_pred CCCCCCeEEEEEcCcCChhHhccCCceEEEeCCCCCCcEEEEC---------CEEEeCceEecCCCCHHHHHHHhhhhHH
Confidence 345789999999999999998877666665554 3444432 3589999999999999999999999999
Q ss_pred HHhhcCCCcceeeeccCCCCCccccC---------CChHhHHHHHHHhhhcc-ccceEEEEeeEEEEecccccccCCCCC
Q 001290 95 LSVVNGINSTFFAYGQTSSGKTYTMG---------GITEYAIQDIYDYIDTH-QEREFVLKFSAMEIYNESVRDLLSTDS 164 (1106)
Q Consensus 95 ~svL~G~NatIfAYGQTGSGKTyTM~---------GIi~rai~dLF~~I~~~-~~~~f~V~vS~lEIYNE~V~DLLs~~s 164 (1106)
+++++|||+||||||||||||||||. ||+||++++||+.+... ....|.|++||+|||||+|+|||++..
T Consensus 78 ~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~ 157 (365)
T 2y65_A 78 TDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIFNHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVSK 157 (365)
T ss_dssp HHHHTTCCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHHHHHHCCSCEEEEEEEEEEEEETTEEEETTCTTC
T ss_pred HHHhCCCceEEEeecCCCCCCceEEecCCCCcccCChHHHHHHHHHHHHHhccCCceEEEEEEEEEEECCeeeecccCCc
Confidence 99999999999999999999999995 79999999999999764 457899999999999999999999988
Q ss_pred CCceeeeCCCCCeEecCceEEEecCHHHHHHHHHHHHhhccccccccCCCCCCceEEEEEEEEeecccccCCCCceeEEE
Q 001290 165 TPLRLLDDPEKGTVVERLTEETLTDMSHLMELLAVCEAQRQIGETALNETSSRSHQILRLTIESSAREYLGAGNSSILSA 244 (1106)
Q Consensus 165 ~~L~i~ed~~~g~~V~gLtev~V~S~eE~l~LL~~G~~~R~~asT~~N~~SSRSHaIftI~Ie~~~~e~~~~~~~~~~~S 244 (1106)
.++.+++++.++++|.|++++.|.++++++.+|..|.++|++++|.+|..|||||+||+|+|.+.... ......|
T Consensus 158 ~~l~i~e~~~~~~~v~gl~~~~V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~-----~~~~~~s 232 (365)
T 2y65_A 158 VNLSVHEDKNRVPYVKGATERFVSSPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLE-----NQKKLSG 232 (365)
T ss_dssp CSBCEEECSSSCEEETTCCCEEECSHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETT-----TCCEEEE
T ss_pred CCceEEECCCCCEEecCCEEEecCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecC-----CCCEeEE
Confidence 89999999999999999999999999999999999999999999999999999999999999876432 2345789
Q ss_pred eEEEEecCCCccccccccccccccccccchhhHHHHHHHHHHhcCCCCCccCCCCChhhHhhhhccCCCceeeEEEecCC
Q 001290 245 SVNFVDLAGSERASQTLNAGARLKEGSHINRSLLTLGTVIRKLSKGRNAHIPYRDSKLTRILQNSLGGNARTAIICTMSP 324 (1106)
Q Consensus 245 kL~fVDLAGSER~~kt~s~G~rlkEg~~INkSLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdsLGGNSkT~mI~tISP 324 (1106)
+|+|||||||||++++++.|.+++|+.+||+||++||+||.+|+.++..||||||||||+||||+||||++|+|||||||
T Consensus 233 kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~vI~aL~~~~~~hvPyRdSkLT~lLqdsLgGnskt~mI~~isP 312 (365)
T 2y65_A 233 KLYLVDLAGSEKVSKTGAEGTVLDEAKNINKSLSALGNVISALADGNKTHIPYRDSKLTRILQESLGGNARTTIVICCSP 312 (365)
T ss_dssp EEEEEECCCCCC----------------CCHHHHHHHHHHHHHHHCCCSCCCGGGCHHHHHTGGGTTSSSEEEEEEEECC
T ss_pred EEEEEECCCCCcchhcCCcchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCCccccCHHHHHHHhhcCCCccEEEEEEecC
Confidence 99999999999999999999999999999999999999999999876789999999999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHhhcccccccccccCHHHHHHHHHHHHHHHH
Q 001290 325 ARSHVEQSRNTLLFASCAKEVATNAQVNVVMSDKALVKQLQKELARLE 372 (1106)
Q Consensus 325 s~~~~eETLsTLrFAsrAK~Ikn~p~vN~~~sd~alik~Lq~Ei~rLe 372 (1106)
+..+++||++||+||+|||.|+|+|.+|...+.++++++|++|+++|+
T Consensus 313 ~~~~~~ETl~TL~fA~rak~I~n~~~~n~~~~~~~~~~~~~~e~~~~~ 360 (365)
T 2y65_A 313 ASFNESETKSTLDFGRRAKTVKNVVCVNEELTAEEWKRRYEKEKEKNA 360 (365)
T ss_dssp BGGGHHHHHHHHHHHHHHTTCEEECCCEEECCSHHHHHC---------
T ss_pred ccCCHHHHHHHHHHHHHHhcccCcceeCCCCCHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888888888777654
|
| >3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A* | Back alignment and structure |
|---|
| >1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens} | Back alignment and structure |
|---|
| >3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
| >2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis} | Back alignment and structure |
|---|
| >3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A* | Back alignment and structure |
|---|
| >1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ... | Back alignment and structure |
|---|
| >1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A* | Back alignment and structure |
|---|
| >2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster} | Back alignment and structure |
|---|
| >2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C* | Back alignment and structure |
|---|
| >2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa} | Back alignment and structure |
|---|
| >3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0 | Back alignment and structure |
|---|
| >4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A* | Back alignment and structure |
|---|
| >3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
| >2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D* | Back alignment and structure |
|---|
| >2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens} | Back alignment and structure |
|---|
| >1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A* | Back alignment and structure |
|---|
| >3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii} | Back alignment and structure |
|---|
| >1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
| >1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A* | Back alignment and structure |
|---|
| >3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A* | Back alignment and structure |
|---|
| >3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A* | Back alignment and structure |
|---|
| >4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli} | Back alignment and structure |
|---|
| >2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9 | Back alignment and structure |
|---|
| >2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
| >3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A* | Back alignment and structure |
|---|
| >2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426} | Back alignment and structure |
|---|
| >2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3} | Back alignment and structure |
|---|
| >2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A* | Back alignment and structure |
|---|
| >2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A* | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1106 | ||||
| d1goja_ | 354 | c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5 | 2e-77 | |
| d1bg2a_ | 323 | c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId | 4e-74 | |
| d2zfia1 | 349 | c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), | 8e-70 | |
| d1x88a1 | 345 | c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), | 1e-68 | |
| d1v8ka_ | 362 | c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c | 3e-68 | |
| d1ry6a_ | 330 | c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodiu | 5e-68 | |
| d1f9va_ | 342 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 7e-65 | |
| d1sdma_ | 364 | c.37.1.9 (A:) Kinesin heavy chain-like protein {Po | 2e-64 | |
| d2ncda_ | 368 | c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjun | 3e-57 |
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Length = 354 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin species: Neurospora crassa [TaxId: 5141]
Score = 256 bits (655), Expect = 2e-77
Identities = 121/368 (32%), Positives = 188/368 (51%), Gaps = 25/368 (6%)
Query: 18 AGQEERILVFVRLRPLNEKEYARNDVSDWECINNNSIVFKNSLLERSVYPPAYTFDRVFG 77
+ I V R RP N E ++ + + S +TFDRVF
Sbjct: 1 SSSANSIKVVARFRPQNRVEIESGGQPIVTFQGPDTCTVDSKEAQGS-----FTFDRVFD 55
Query: 78 CECPTRQVYEEAAKEVTLSVVNGINSTFFAYGQTSSGKTYTMG----------GITEYAI 127
C +++ + K ++NG N T FAYGQT +GK+YTM G+ +
Sbjct: 56 MSCKQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIV 115
Query: 128 QDIYDYIDTHQE-REFVLKFSAMEIYNESVRDLLSTDSTPLRLLDDPEKGTVVERLTEET 186
+ I+ I + E+ ++ S MEIY E +RDLL+ + L + ++ +G V+ L E
Sbjct: 116 EQIFTSILSSAANIEYTVRVSYMEIYMERIRDLLAPQNDNLPVHEEKNRGVYVKGLLEIY 175
Query: 187 LTDMSHLMELLAVCEAQRQIGETALNETSSRSHQILRLTIESSAREYLGAGNSSILSASV 246
++ + + E++ R + T +N+ SSRSH I +TI E S S +
Sbjct: 176 VSSVQEVYEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVE-----TGSAKSGQL 230
Query: 247 NFVDLAGSERASQTLNAGARLKEGSHINRSLLTLGTVIRKLSKGRNAHIPYRDSKLTRIL 306
VDLAGSE+ +T +G L+E IN+SL LG VI L+ G+++H+PYRDSKLTRIL
Sbjct: 231 FLVDLAGSEKVGKTGASGQTLEEAKKINKSLSALGMVINALTDGKSSHVPYRDSKLTRIL 290
Query: 307 QNSLGGNARTAIICTMSPARSHVEQSRNTLLFASCAKEVATNAQVNVVMSDKALVKQLQK 366
Q SLGGN+RT +I SP+ + ++ +TL F AK + A+VN +S +L++
Sbjct: 291 QESLGGNSRTTLIINCSPSSYNDAETLSTLRFGMRAKSIKNKAKVNAELSP----AELKQ 346
Query: 367 ELARLENE 374
LA+ + +
Sbjct: 347 MLAKAKTQ 354
|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Length = 323 | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Length = 349 | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Length = 345 | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} Length = 362 | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Length = 330 | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} Length = 342 | Back information, alignment and structure |
|---|
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Length = 364 | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 368 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1106 | |||
| d1sdma_ | 364 | Kinesin heavy chain-like protein {Potato (Solanum | 100.0 | |
| d1goja_ | 354 | Kinesin {Neurospora crassa [TaxId: 5141]} | 100.0 | |
| d1v8ka_ | 362 | Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090 | 100.0 | |
| d1x88a1 | 345 | Kinesin {Human (Homo sapiens), mitotic kinesin eg5 | 100.0 | |
| d2zfia1 | 349 | Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 | 100.0 | |
| d1bg2a_ | 323 | Kinesin {Human (Homo sapiens) [TaxId: 9606]} | 100.0 | |
| d1ry6a_ | 330 | Kinesin {Malaria parasite (Plasmodium falciparum) | 100.0 | |
| d2ncda_ | 368 | Kinesin motor Ncd (non-claret disjunctional) {Frui | 100.0 | |
| d1f9va_ | 342 | Kinesin motor Ncd (non-claret disjunctional) {Bake | 100.0 | |
| d1l8qa2 | 213 | Chromosomal replication initiation factor DnaA {Aq | 91.88 | |
| d1r7ra3 | 265 | Membrane fusion ATPase VCP/p97 {Mouse (Mus musculu | 90.89 | |
| d1w5sa2 | 287 | CDC6-like protein APE0152, N-terminal domain {Aero | 87.38 | |
| d1lv7a_ | 256 | AAA domain of cell division protein FtsH {Escheric | 83.78 | |
| d1gvnb_ | 273 | Plasmid maintenance system epsilon/zeta, toxin zet | 82.25 | |
| d1ixza_ | 247 | AAA domain of cell division protein FtsH {Thermus | 81.15 |
| >d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: P-loop containing nucleoside triphosphate hydrolases superfamily: P-loop containing nucleoside triphosphate hydrolases family: Motor proteins domain: Kinesin heavy chain-like protein species: Potato (Solanum tuberosum) [TaxId: 4113]
Probab=100.00 E-value=1.2e-76 Score=667.28 Aligned_cols=340 Identities=35% Similarity=0.532 Sum_probs=296.5
Q ss_pred CEEEEEEeCCCChhhhhcCCCcceEEecCceEEecCCCccCCCCCCceecceecCCCCChHHHHHHHHHHHHHHhhcCCC
Q 001290 23 RILVFVRLRPLNEKEYARNDVSDWECINNNSIVFKNSLLERSVYPPAYTFDRVFGCECPTRQVYEEAAKEVTLSVVNGIN 102 (1106)
Q Consensus 23 rIrV~VRVRPl~~~E~~~~~~~~~~~i~~~tIv~~~~~~~~s~~~~~F~FD~VF~~~atQeeVYe~vv~plV~svL~G~N 102 (1106)
||+|+|||||+.+.|...+....+.+.++.++....... .++.|.||+||+++++|++||+.+ .|+|+++++|||
T Consensus 1 rIkV~vRvRP~~~~E~~~~~~~~v~~~~~~~~~~~~~~~----~~~~f~FD~vf~~~~~q~~vy~~v-~~lv~~~l~G~n 75 (364)
T d1sdma_ 1 KIRVYCRLRPLCEKEIIAKERNAIRSVDEFTVEHLWKDD----KAKQHMYDRVFDGNATQDDVFEDT-KYLVQSAVDGYN 75 (364)
T ss_dssp CCEEEEEECCCCHHHHHTTCCBCEEECSTTEEEEECSSS----SEEEEECSEEECTTCCHHHHHHTT-THHHHHHHTTCE
T ss_pred CeEEEEEcCCCChhhcccCCCCeEEeCCCCeEEecCCCC----CceEEECCeecCCCCCHHHHHHHH-HHHHHHHhcCCc
Confidence 699999999999999888888888888888877654322 246899999999999999999975 899999999999
Q ss_pred cceeeeccCCCCCccccC------CChHhHHHHHHHhhhccc-cceEEEEeeEEEEecccccccCCCCC---CCceeeeC
Q 001290 103 STFFAYGQTSSGKTYTMG------GITEYAIQDIYDYIDTHQ-EREFVLKFSAMEIYNESVRDLLSTDS---TPLRLLDD 172 (1106)
Q Consensus 103 atIfAYGQTGSGKTyTM~------GIi~rai~dLF~~I~~~~-~~~f~V~vS~lEIYNE~V~DLLs~~s---~~L~i~ed 172 (1106)
+||||||||||||||||+ ||+|+++.+||..+.... ...|.|++||+|||||+|||||.+.. ..+.++++
T Consensus 76 ~~i~aYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~~~~~~v~~S~~EIyne~i~DLL~~~~~~~~~l~~~~~ 155 (364)
T d1sdma_ 76 VCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNKFSFSLKAYMVELYQDTLVDLLLPKQAKRLKLDIKKD 155 (364)
T ss_dssp EEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHGGGTEEEEEEEEEEEESSSCEEETTSCTTSCCCCCEEEEC
T ss_pred eeeeccccCCCCcccccccCccccchhHHHHHHHHhhhhhccccccceEEEEEEEEeccccccccCcccccccccceeec
Confidence 999999999999999997 799999999999997755 46899999999999999999998765 36789999
Q ss_pred CCCCeEecCceEEEecCHHHHHHHHHHHHhhccccccccCCCCCCceEEEEEEEEeecccccCCCCceeEEEeEEEEecC
Q 001290 173 PEKGTVVERLTEETLTDMSHLMELLAVCEAQRQIGETALNETSSRSHQILRLTIESSAREYLGAGNSSILSASVNFVDLA 252 (1106)
Q Consensus 173 ~~~g~~V~gLtev~V~S~eE~l~LL~~G~~~R~~asT~~N~~SSRSHaIftI~Ie~~~~e~~~~~~~~~~~SkL~fVDLA 252 (1106)
+.++++|.|++++.|.++++++.+|..|..+|+++.|.+|..|||||+||+|+|.+.... ......++|+|||||
T Consensus 156 ~~~~~~v~~l~~~~v~s~~~~~~~l~~g~~~R~~~~t~~n~~ssRsH~i~~i~v~~~~~~-----~~~~~~~kl~~vDLA 230 (364)
T d1sdma_ 156 SKGMVSVENVTVVSISTYEELKTIIQRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQ-----TQAIARGKLSFVDLA 230 (364)
T ss_dssp TTSCEEEETCCCEEECSHHHHHHHHHHHHHHHCCCSSCTTCHHHHSEEEEEEEEEEEETT-----TCCEEEEEEEEEECC
T ss_pred ccCccccccceeeeeCCHHHHHHHhhccceeeccccccccccccccceEEEEEEEEeccC-----cceeeeEEEEeechh
Confidence 999999999999999999999999999999999999999999999999999999886543 344688999999999
Q ss_pred CCccccccccccccccccccchhhHHHHHHHHHHhcCCCCCccCCCCChhhHhhhhccCCCceeeEEEecCCCCcchHHH
Q 001290 253 GSERASQTLNAGARLKEGSHINRSLLTLGTVIRKLSKGRNAHIPYRDSKLTRILQNSLGGNARTAIICTMSPARSHVEQS 332 (1106)
Q Consensus 253 GSER~~kt~s~G~rlkEg~~INkSLlaLg~VI~aLs~gk~~hIPYRDSKLTrLLqdsLGGNSkT~mI~tISPs~~~~eET 332 (1106)
||||..++++.|.+++|+.+||+||++|++||.+|+.+ ..|||||+||||+||+++|||||+|+|||||||+..+++||
T Consensus 231 GsEr~~~~~~~g~~~~E~~~iN~SL~~L~~vi~aL~~~-~~~ipyR~SkLT~lL~d~Lggns~t~~I~~isp~~~~~~eT 309 (364)
T d1sdma_ 231 GSERVKKSGSAGNQLKEAQSINKSLSALGDVISALSSG-NQHIPYRNHKLTMLMSDSLGGNAKTLMFVNISPAESNLDET 309 (364)
T ss_dssp CCSCCCC---------CCCTTCHHHHHHHHHHHHHHHT-CSCCCGGGCHHHHHTTTTTTSSSEEEEEEEECCBGGGHHHH
T ss_pred hccccccccccCceeeeccccccchhhHHHHHHHHHcC-CCcCCchhhhhhHHHHhhcCCCceEEEEEEeCCCcchHHHH
Confidence 99999999999999999999999999999999999985 56999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhcccccccccccCHHHHHHHHHHHHHHHHHHHH
Q 001290 333 RNTLLFASCAKEVATNAQVNVVMSDKALVKQLQKELARLENEMK 376 (1106)
Q Consensus 333 LsTLrFAsrAK~Ikn~p~vN~~~sd~alik~Lq~Ei~rLe~eL~ 376 (1106)
++||+||++||+|+|+|.+|+... .+.+|+++++.|+.++.
T Consensus 310 l~TL~fa~~ak~i~n~p~~n~~~~---~~~~l~~~i~~l~~~~~ 350 (364)
T d1sdma_ 310 HNSLTYASRVRSIVNDPSKNVSSK---EVARLKKLVSYWKEQAG 350 (364)
T ss_dssp HHHHHHHHHHTTCCCCCCCCEECH---HHHHHHTTTTCC-----
T ss_pred HHHHHHHHHHhhcccCCcccCCHH---HHHHHHHHHHHHHHHHH
Confidence 999999999999999999997642 34556666666665543
|
| >d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
| >d1v8ka_ c.37.1.9 (A:) Kinesin {Mouse (Mus musculus), kif2c [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
| >d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d1f9va_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
| >d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
| >d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
| >d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
| >d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|