Citrus Sinensis ID: 001303

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080------1090------1100----

MLSSFRTRTRILLLSPLLHSAAASVSDAIVSLAAISSRSPYASSSSLSSIMTEPEKKIETAEDLERKKKKEEKAKEKELKKLKALEKAEQAKLKKQEQGGNSLKKSVKKNVKRDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVEVDIEAEREKIRTKLTETQKQREKLEKIINAPGYQEKVPSRIQEDNAAKLAKLLQEIDFFENESNRLGNSN

ccccccccHHHcccccccccccccHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHcccccccEEccccccHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHccHHHHHHHHcccccccccccccccccHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEEEEccccccEEEEEccccccccccEEEEEcccccccccccccEEEcccccccccEEEcccccccccccccccccccccHHHHHHHHHcccccccEEccccccccccccccccccHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEEccccHHHHHHHHccccccHHHHHHHcccccccEEEccccccccccccccccEEEEccHHHHHHHHHHHcccccccEEEccccccccccccccccccccccccccHHHHccccccccccccHHHHHHHHHHHHccccccccccccEEEcccccccccccccccccccccccHHcccccHHHHHHHHHHccccHHHHHHHHHHHccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccccccccccccccEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEccHHHHHHHHHHHHHHHHHHccccEEEEccccccccccccEEEEccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc

cccccccHHHHHcccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHccccccccccccccccccccccccccHHccccHHHHHHHHHHHHHHccccccccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccHHHHHHHHHcccccccHHHcccccHHHHHHHHHHHHHHHcccEEEccEEEccccccccEEEcEEEEcEcccccEEEEccccccccEEEEEEEEEEEccccccEEEEEEccccHcccccEEEEccccHHHHHHcccEEEEcccccEcEEEEccHHccccccccEEEEcccccccccHccccccccEEEEEcccccccccccHHHccccHHHHHHHHHHHHHHccccEEEcccccEEccccccccEEcccccccEEEEcHHHHHHHHHHHHccccccEEEccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccccEEEEccHHHHHHHHHHHcccccEEEcccccHHHHHHHHccccHHHcccccccHHHHHcccccEEHcHHHHHHHHHHHHHHHHHHcccccccEEEEEEEEEEccccccccccccccccccEEEccccHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHcccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHccccccHccccccccccEEEEcccHHHHHHHHHHHHHHHHHHccccEEEEcccccccccHHEEEEEcccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc

MLSSFRTRTRILLLSPLLHSAAASVSDAIVSLAAIssrspyasssslssimtepekkiETAEDLERKKKKEEKAKEKELKKLKALEKAEQAKLKKqeqggnslkKSVKknvkrddgednaeefvdpetplgekkRMSKQMakeynpssvekSWYSWWENsgyfiadnksskpsfvivlpppnvtgalHIGHALTTAIQDTIIRWRRMSgynalwvpgmdhagiATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRlgasldwsrecftMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISdievdyvdipkremrnvpgyekqVEFGVLTsfayplegglgEIVVATTRVETMLGdtaiaihpedaryshlhgkfaihpfngrkipiicdailvdpkfgtgavkitpahdpndfdvgkrhnLEFINIFtddgkinsngglefegmprfKAREAVNEALKKKglyrgakdnemrlglcsrsndvvepmikpqwyvnCNSMAMEALYAVMDddkkkleliPRQYTAEWRRWLEAIRDWCVSRqlwwghqipawyvtleddelkelgsyndhwivARDEKEALAVANKKfsgkkfemcqdpdvldtwfssglfplsvlgwpddtddlkafyptsvletgHDILFFWVARMVMLGIKlggevpftkvylhpmirdahgRKMSkslgnvidpleviNGISLEGLHKrleegnldpkeLEVAkkgqkadfpngipecgtDALRFALVSYTaqsdkinldIQRVVGYRQWCNKLWNAVRFSmsklgegfvpplklhphnlpfscKWILSVLNKAISRTAsslnsyefsdAASTVYSWWQYQFCDVFIEAikpyfagdnpafasERSAAQHVLWVCLETglrllhpfmpfvTEELwqrlpqpkgcatkesimlceypsavegwtDERAEFEMDLVESTVRCIRSLRAEVLgkqknerlpaiAFCQTKGVSEIIRSHELEIVTLSTSSSLKVLlsgtdeaptdcafqNVNENLKVYLKVEVDIEAEREKIRTKLTETQKQREKLEKIInapgyqekvpsriQEDNAAKLAKLLQEIDFFenesnrlgnsn

MLSSFRTRTRILLLSPLLHSAAASVSDAIVSLAAIssrspyasssslssimtepekkietaedlerkkkkeekakekelkkLKALEKAEQaklkkqeqggnslkksvkknvkrddgednaeefvdpetplgekkrmskqmakeynpssveksWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRerkltrhdigreqfvsevWKWKDEYGGtilrqqrrlgasldwSRECFtmdekrskavTEAFVRLYKEgliyrdlrlvnWDCVLRTAisdievdyvdipkreMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALkkkglyrgakdnemrlglcsrsndvvepmiKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTaqsdkinldIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAevlgkqknerlpaiafCQTKGVSEIIRSHELEIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVEVDIEAEREKirtkltetqkqreklekiinapgyqekvpsRIQEDNAAKLAKLLQEidffenesnrlgnsn

MLSSFRTRTRIlllspllhsaaasvsdaivslaaissrspyasssslssIMTEPEKKIETAEDLERkkkkeekakekelkklkalekaeqaklkkqeqggnslkksvkknvkRDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIvtlstssslkvllsGTDEAPTDCAFQNVNENLKVYLKVEVDIEAEREKIRTKLTETQKQREKLEKIINAPGYQEKVPSRIQEDNAAKLAKLLQEIDFFENESNRLGNSN

********TRILLLSPLLHSAAASVSDAIVSLA*********************************************************************************************************************KSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGM**F*********L**KGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLH*************************NGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVEVDIEA**********************************************LLQEIDF************

***************************************************************************************************************************V******************EYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEE************KGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVL**QKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVEVDIEAEREKIRTKLT*****************YQEKVPSRIQEDNAA******Q***FFEN**NRL****

********TRILLLSPLLHSAAASVSDAIVSLAAISS******************KKIETAE****************LKKLKALEKA*******************************AEEFVDPETPL********************KSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVEVDIEAEREKIRTKLTETQKQREKLEKIINAPGYQEKVPSRIQEDNAAKLAKLLQEIDFFENE********

***SFRTRTRILLLSPLLHSAAASVSDAIVSLAA************************E***D***KKKKE************************************************AEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLH*HNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPA**SERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVEVDIEAEREKIRTKLTETQKQREKLEKIINAPGYQEKVPSRIQEDNAAKLAKLLQEIDFFENESNRLGNS*

oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

SSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MLSSFRTRTRILLLSPLLHSAAASVSDAIVSLAAISSRSPYASSSSLSSIMTEPEKxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxGNSLKKSVKKNVKRDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVEVDIEAExxxxxxxxxxxxxxxxxxxxxINAPGYQEKVPSRIxxxxxxxxxxxxxxxxxxxxxxxxxxxxN

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1104	2.2.26 [Sep-21-2011]
P93736		1108	Valine--tRNA ligase OS=Ar	yes	no	0.971	0.968	0.744	0.0
Q86KU2		1072	Probable valine--tRNA lig	yes	no	0.859	0.885	0.522	0.0
P49696		1217	Valine--tRNA ligase OS=Ta	N/A	no	0.914	0.829	0.494	0.0
P26640		1264	Valine--tRNA ligase OS=Ho	yes	no	0.862	0.753	0.509	0.0
Q9Z1Q9		1263	Valine--tRNA ligase OS=Mu	yes	no	0.921	0.805	0.485	0.0
Q04462		1264	Valine--tRNA ligase OS=Ra	yes	no	0.923	0.806	0.482	0.0
Q9U1Q4		1050	Valine--tRNA ligase OS=Ca	yes	no	0.883	0.928	0.494	0.0
P07806		1104	Valine--tRNA ligase, mito	yes	no	0.860	0.860	0.485	0.0
O75005		980	Valine--tRNA ligase OS=Sc	yes	no	0.753	0.848	0.528	0.0
P28350		1093	Valine--tRNA ligase, mito	N/A	no	0.849	0.858	0.480	0.0

>sp\|P93736\|SYV_ARATH Valine--tRNA ligase OS=Arabidopsis thaliana GN=VALRS PE=1 SV=2	Back alignment and function desciption

 Score = 1666 bits (4314), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 808/1086 (74%), Positives = 934/1086 (86%), Gaps = 13/1086 (1%)

Query: 29   IVSLAAISSRSPYAS---------SSSLSSIMTEPEKKIETAEDLERKKKKEEKAKEKEL 79
            +   +A  SRS + S         S   S  M+E EKKI T E+LERKKKKEEKAKEKEL
Sbjct: 14   VSCCSATHSRSSFLSPTLTNQLVRSFHGSRTMSESEKKILTEEELERKKKKEEKAKEKEL 73

Query: 80   KKLKALEKAEQAKLKKQE--QGGNSLKKSVKKNVKRDDGEDNAEEFVDPETPLGEKKRMS 137
            KK KALEK   A+LK ++   G N  KKS KK+ KRD  E+N E+FVDPETPLGE+KR+S
Sbjct: 74   KKQKALEKERLAELKAKQAKDGTNVPKKSAKKSSKRDASEENPEDFVDPETPLGERKRLS 133

Query: 138  KQMAKEYNPSSVEKSWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAI 197
             QMAK+Y+P++VEKSWY+WWE S  F AD KSSKP FVIVLPPPNVTGALHIGHALT+AI
Sbjct: 134  SQMAKQYSPATVEKSWYAWWEKSDLFKADAKSSKPPFVIVLPPPNVTGALHIGHALTSAI 193

Query: 198  QDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWK 257
            +DTIIRW+RMSGYNALWVPG+DHAGIATQVVVEKK+MR+R +TRHD+GRE+FV EVWKWK
Sbjct: 194  EDTIIRWKRMSGYNALWVPGVDHAGIATQVVVEKKIMRDRGMTRHDVGREEFVKEVWKWK 253

Query: 258  DEYGGTILRQQRRLGASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCV 317
            ++YGGTIL Q RRLGASLDWSRECFTMDE+RSKAVTEAFVRLYKEGLIYRD+RLVNWDC+
Sbjct: 254  NQYGGTILTQLRRLGASLDWSRECFTMDEQRSKAVTEAFVRLYKEGLIYRDIRLVNWDCI 313

Query: 318  LRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETML 377
            LRTAISD+EV+Y+DI ++ +  VPGYEK VEFG+LTSFAYPLEGGLGE++VATTRVETML
Sbjct: 314  LRTAISDVEVEYIDIKEKTLLKVPGYEKPVEFGLLTSFAYPLEGGLGEVIVATTRVETML 373

Query: 378  GDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDF 437
            GDTAIAIHP+DARY HLHGKFA+HPFNGRK+PIICD ILVDP FGTG VKITPAHDPND 
Sbjct: 374  GDTAIAIHPDDARYKHLHGKFAVHPFNGRKLPIICDGILVDPNFGTGCVKITPAHDPNDC 433

Query: 438  DVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRL 497
            +VGKRH LEFINIFTDDGKIN+NGG +F GMPRF AREAV EAL+K+GLYRGAK+NEMRL
Sbjct: 434  EVGKRHKLEFINIFTDDGKINTNGGSDFAGMPRFAAREAVVEALQKQGLYRGAKNNEMRL 493

Query: 498  GLCSRSNDVVEPMIKPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIR 557
            GLCSR+NDV+EPMIKPQWYVNC+ +  EAL   + D+ KKLE +P+QYTAEWRRWLE IR
Sbjct: 494  GLCSRTNDVIEPMIKPQWYVNCSMIGKEALDVAITDENKKLEFVPKQYTAEWRRWLENIR 553

Query: 558  DWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEM 617
            DWC+SRQLWWGH+IPAWY TLE+D+LKE+G+Y+DHW+VAR E +A   A +KF GKKFE+
Sbjct: 554  DWCISRQLWWGHRIPAWYATLEEDQLKEVGAYSDHWVVARTEDDAREEAAQKFLGKKFEL 613

Query: 618  CQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKL 677
             +DPDVLDTWFSSGLFPLSVLGWPD TDD KAFYPTSVLETGHDILFFWVARMVM+G+KL
Sbjct: 614  TRDPDVLDTWFSSGLFPLSVLGWPDVTDDFKAFYPTSVLETGHDILFFWVARMVMMGMKL 673

Query: 678  GGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELE 737
            GGEVPF+KVY HPMIRDAHGRKMSKSLGNVIDPLEVING++LEGLHKRLEEGNLDPKE+ 
Sbjct: 674  GGEVPFSKVYFHPMIRDAHGRKMSKSLGNVIDPLEVINGVTLEGLHKRLEEGNLDPKEVI 733

Query: 738  VAKKGQKADFPNGIPECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFS 797
            VAK+GQ  DFPNGIPECGTDALRFALVSYTAQSDKINLDI RVVGYRQWCNKLWNAVRF+
Sbjct: 734  VAKEGQVKDFPNGIPECGTDALRFALVSYTAQSDKINLDILRVVGYRQWCNKLWNAVRFA 793

Query: 798  MSKLGEGFVPPLKLHPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQ 857
            M KLG+G+ PP  L P  +PFSC+WILSVLNKAIS+T  SL+++EFSDAA+T+Y+WWQYQ
Sbjct: 794  MMKLGDGYTPPQTLSPETMPFSCQWILSVLNKAISKTVVSLDAFEFSDAANTIYAWWQYQ 853

Query: 858  FCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQP 917
            FCDV+IEAIKPYFAGDNP FASER+ AQH LW+ LETGLRLLHPFMPFVTEELWQRLP P
Sbjct: 854  FCDVYIEAIKPYFAGDNPTFASERAHAQHALWISLETGLRLLHPFMPFVTEELWQRLPAP 913

Query: 918  KGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIA 977
            K    K SIM+C+YPSA+E W++E+ E EMD V +TV+C+R+LRA +L KQKNERLPA A
Sbjct: 914  KDTERKASIMICDYPSAIENWSNEKVESEMDTVLATVKCMRALRAGLLEKQKNERLPAFA 973

Query: 978  FCQTKGVSEIIRSHELEIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVE--V 1035
             C+    SEI++SHELEI TL+  SSL+V+  G   AP   + + VNENLKVYL+V+  +
Sbjct: 974  LCENNVTSEIVKSHELEIRTLANLSSLEVVSKGQHAAPPGSSVETVNENLKVYLEVDGAI 1033

Query: 1036 DIEAEREKIRTKLTETQKQREKLEKIINAPGYQEKVPSRIQEDNAAKLAKLLQEIDFFEN 1095
            + EAE+EKIR K+ E QKQ+EKL+K+++   Y+EKVP+ I+EDNA KLAK+LQE DFFE 
Sbjct: 1034 NTEAEQEKIRNKIGELQKQKEKLQKMMSVSTYEEKVPANIKEDNANKLAKILQEFDFFEK 1093

Query: 1096 ESNRLG 1101
            ES RL 
Sbjct: 1094 ESARLA 1099

Arabidopsis thaliana (taxid: 3702)
EC: 6EC: .EC: 1EC: .EC: 1EC: .EC: 9

>sp\|Q86KU2\|SYVC_DICDI Probable valine--tRNA ligase, cytoplasmic OS=Dictyostelium discoideum GN=valS1 PE=3 SV=1	Back alignment and function description

>sp\|P49696\|SYVC_TAKRU Valine--tRNA ligase OS=Takifugu rubripes GN=vars PE=3 SV=1	Back alignment and function description

>sp\|P26640\|SYVC_HUMAN Valine--tRNA ligase OS=Homo sapiens GN=VARS PE=1 SV=4	Back alignment and function description

>sp\|Q9Z1Q9\|SYVC_MOUSE Valine--tRNA ligase OS=Mus musculus GN=Vars PE=2 SV=1	Back alignment and function description

>sp\|Q04462\|SYVC_RAT Valine--tRNA ligase OS=Rattus norvegicus GN=Vars PE=2 SV=2	Back alignment and function description

>sp\|Q9U1Q4\|SYV_CAEEL Valine--tRNA ligase OS=Caenorhabditis elegans GN=vrs-2 PE=1 SV=1	Back alignment and function description

>sp\|P07806\|SYV_YEAST Valine--tRNA ligase, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=VAS1 PE=1 SV=2	Back alignment and function description

>sp\|O75005\|SYV_SCHPO Valine--tRNA ligase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=vas2 PE=3 SV=1	Back alignment and function description

>sp\|P28350\|SYV_NEUCR Valine--tRNA ligase, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=cyt-20 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1104
255579057		1065	valyl-tRNA synthetase, putative [Ricinus	0.907	0.940	0.787	0.0
15223829		1108	Valyl-tRNA synthetase [Arabidopsis thali	0.971	0.968	0.744	0.0
17065234		1064	similar to valyl tRNA synthetase [Arabid	0.951	0.987	0.759	0.0
297849874		1108	hypothetical protein ARALYDRAFT_471639 [	0.954	0.951	0.755	0.0
7527726		1115	T5E21.11 [Arabidopsis thaliana]	0.971	0.962	0.739	0.0
224097273		1054	predicted protein [Populus trichocarpa]	0.891	0.933	0.779	0.0
297741117		1106	unnamed protein product [Vitis vinifera]	0.913	0.912	0.758	0.0
1890130		1107	valyl tRNA synthetase [Arabidopsis thali	0.971	0.968	0.740	0.0
359490404		1071	PREDICTED: valyl-tRNA synthetase-like [V	0.913	0.942	0.758	0.0
224081316		1046	predicted protein [Populus trichocarpa]	0.916	0.967	0.740	0.0

>gi\|255579057\|ref\|XP_002530379.1\| valyl-tRNA synthetase, putative [Ricinus communis] gi\|223530096\|gb\|EEF32012.1\| valyl-tRNA synthetase, putative [Ricinus communis]	Back alignment and taxonomy information

 Score = 1689 bits (4373), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 796/1011 (78%), Positives = 880/1011 (87%), Gaps = 9/1011 (0%)

Query: 96   QEQGGNSL--KKSVKKNVKRDDG--EDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEK 151
            Q+ GGN+   K   KKN +RD G  E+N E   DP TP GE+K++S QMAK+Y+PS+VEK
Sbjct: 49   QQSGGNAATKKSGPKKNARRDVGGTEENPE---DPHTPFGERKKLSAQMAKQYSPSAVEK 105

Query: 152  SWYSWWENSGYFIADNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYN 211
            SWY+WWE SGYF A  KSSKP F IV PPPNVTGALHIGHALT A++DTIIRWRRMSGYN
Sbjct: 106  SWYAWWEKSGYFTAHAKSSKPPFTIVFPPPNVTGALHIGHALTAAVEDTIIRWRRMSGYN 165

Query: 212  ALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRL 271
             LWVPG+DHAGIATQVVVEKKLMRER LTRHDIGREQFVSEVWKWK+EYGGTIL Q RRL
Sbjct: 166  TLWVPGVDHAGIATQVVVEKKLMRERHLTRHDIGREQFVSEVWKWKEEYGGTILGQLRRL 225

Query: 272  GASLDWSRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVD 331
            GASLDWSRECFTMDEKRSKAV E FVRLYKEGLIYRDLRLVNWDC LRTAISDIEVDY D
Sbjct: 226  GASLDWSRECFTMDEKRSKAVIEEFVRLYKEGLIYRDLRLVNWDCTLRTAISDIEVDYTD 285

Query: 332  IPKREMRNVPGYEKQVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARY 391
            I ++ +  VPGY+K VEFG+LTSFAYPLEG LGEIVVATTR+ETMLGDTAIAIHP+D RY
Sbjct: 286  IKEKTLLKVPGYDKPVEFGLLTSFAYPLEGDLGEIVVATTRIETMLGDTAIAIHPDDQRY 345

Query: 392  SHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIF 451
            SHLHGKFAIHPFNGR++PIICD++LVDP FGTGAVKITPAHDPNDF+VGKRHNLEFINIF
Sbjct: 346  SHLHGKFAIHPFNGRRLPIICDSVLVDPNFGTGAVKITPAHDPNDFEVGKRHNLEFINIF 405

Query: 452  TDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMI 511
            TDDGKINSNGG EF G+PRF+AREAV EAL++KGLYRGAK+NEMRLG CSRSN+VVEPMI
Sbjct: 406  TDDGKINSNGGSEFTGIPRFRAREAVTEALQEKGLYRGAKNNEMRLGCCSRSNEVVEPMI 465

Query: 512  KPQWYVNCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQI 571
            KPQW+VNC++MA +AL A  D +  KLE  P+QY A+W+RWLE IRDWC+SRQLWWGH+I
Sbjct: 466  KPQWFVNCSTMAKQALDAAFDGENPKLEFFPKQYLADWKRWLENIRDWCISRQLWWGHRI 525

Query: 572  PAWYVTLEDDELKELGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSG 631
            PAWY+TLEDDELKE G YNDHW+V RDEKEAL  A+ KF+GKKFEM QDPDVLDTWFSSG
Sbjct: 526  PAWYITLEDDELKEFGVYNDHWVVGRDEKEALEEASLKFAGKKFEMSQDPDVLDTWFSSG 585

Query: 632  LFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPM 691
            LFPLSVLGWPDDTDDLK FYPTSVLETGHDILFFWVARMVMLGI L G+VPF KVYLHPM
Sbjct: 586  LFPLSVLGWPDDTDDLKTFYPTSVLETGHDILFFWVARMVMLGITLRGDVPFRKVYLHPM 645

Query: 692  IRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGI 751
            IRDAHGRKMSKSLGNVIDPLEVINGI+LEGLHKRLEEGNLDP EL  AK GQK DFPNGI
Sbjct: 646  IRDAHGRKMSKSLGNVIDPLEVINGINLEGLHKRLEEGNLDPNELVTAKDGQKKDFPNGI 705

Query: 752  PECGTDALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKL 811
             ECG DALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRF+MSKL   + PPL L
Sbjct: 706  AECGADALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFAMSKLDADYSPPLTL 765

Query: 812  HPHNLPFSCKWILSVLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFA 871
            H   LPFSCKWILS LNKAI+RT S++NSYEFSDAASTVYSWWQYQFCDVFIEAIKPYF 
Sbjct: 766  HTEALPFSCKWILSALNKAIARTVSAMNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFV 825

Query: 872  GDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEY 931
            GDNP +AS ++AAQ  LWVCL+ GLRLLHPFMPFVTEELWQRLP  +    K+SIM+ EY
Sbjct: 826  GDNPEYASAKNAAQGTLWVCLDNGLRLLHPFMPFVTEELWQRLPSARDHTRKDSIMISEY 885

Query: 932  PSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSH 991
            PSAVE WT+E+ E+EMDLVESTV+C+RSLR EVLGKQKNERLPA AFCQ+  V+ II SH
Sbjct: 886  PSAVEAWTNEQVEYEMDLVESTVKCVRSLRGEVLGKQKNERLPAFAFCQSDEVARIISSH 945

Query: 992  ELEIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVE--VDIEAEREKIRTKLT 1049
            ELEI+TL+T SSL+VLLS  D  P  CAF+NVNENLKVYLK +  VD E E EK+R ++ 
Sbjct: 946  ELEILTLATLSSLEVLLSRKDAPPAGCAFENVNENLKVYLKAQGKVDREGELEKVRNQMD 1005

Query: 1050 ETQKQREKLEKIINAPGYQEKVPSRIQEDNAAKLAKLLQEIDFFENESNRL 1100
            + QKQ +KL+K +NA GY+EKVP+ IQE   AKL KLLQEI+FFE ES+RL
Sbjct: 1006 DKQKQYDKLDKKVNASGYKEKVPAHIQEQEIAKLTKLLQEIEFFEKESSRL 1056

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|15223829\|ref\|NP_172913.1\| Valyl-tRNA synthetase [Arabidopsis thaliana] gi\|21542452\|sp\|P93736.2\|SYV_ARATH RecName: Full=Valine--tRNA ligase; AltName: Full=Valyl-tRNA synthetase; Short=ValRS gi\|332191069\|gb\|AEE29190.1\| Valyl-tRNA synthetase [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|17065234\|gb\|AAL32771.1\| similar to valyl tRNA synthetase [Arabidopsis thaliana] gi\|38564252\|gb\|AAR23705.1\| At1g14610 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|297849874\|ref\|XP_002892818.1\| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp. lyrata] gi\|297338660\|gb\|EFH69077.1\| hypothetical protein ARALYDRAFT_471639 [Arabidopsis lyrata subsp. lyrata]	Back alignment and taxonomy information

>gi\|7527726\|gb\|AAF63175.1\|AC010657_11 T5E21.11 [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|224097273\|ref\|XP_002310896.1\| predicted protein [Populus trichocarpa] gi\|222853799\|gb\|EEE91346.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

>gi\|297741117\|emb\|CBI31848.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|1890130\|gb\|AAB49704.1\| valyl tRNA synthetase [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|359490404\|ref\|XP_002275092.2\| PREDICTED: valyl-tRNA synthetase-like [Vitis vinifera]	Back alignment and taxonomy information

>gi\|224081316\|ref\|XP_002306367.1\| predicted protein [Populus trichocarpa] gi\|222855816\|gb\|EEE93363.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1104
TAIR\|locus:2204543		1108	TWN2 "TWIN 2" [Arabidopsis tha	0.951	0.947	0.724	0.0
DICTYBASE\|DDB_G0277733		1072	valS1 "valyl tRNA synthetase"	0.860	0.886	0.516	4.1e-271
ZFIN\|ZDB-GENE-010601-1		1264	vars "valyl-tRNA synthetase" [	0.873	0.762	0.503	5.5e-270
FB\|FBgn0027079		1049	Aats-val "Valyl-tRNA synthetas	0.855	0.899	0.521	3.4e-267
UNIPROTKB\|E2RTJ7		1264	VARS "Uncharacterized protein"	0.861	0.752	0.509	1.4e-263
UNIPROTKB\|E1BLV6		1001	VARS "Uncharacterized protein"	0.862	0.951	0.509	9.6e-263
UNIPROTKB\|B0V043		1264	VARS "Valine--tRNA ligase" [Ho	0.861	0.752	0.510	1.4e-261
UNIPROTKB\|H0Y4A6		1183	VARS "Valine--tRNA ligase" [Ho	0.861	0.803	0.510	1.4e-261
UNIPROTKB\|P26640		1264	VARS "Valine--tRNA ligase" [Ho	0.861	0.752	0.510	1.4e-261
MGI\|MGI:90675		1263	Vars "valyl-tRNA synthetase" [	0.860	0.752	0.504	7.7e-261

TAIR\|locus:2204543 TWN2 "TWIN 2" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 4173 (1474.0 bits), Expect = 0., P = 0.
 Identities = 764/1054 (72%), Positives = 880/1054 (83%)

Query:    51 MTEPEKKIETAEDLERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--XXXX 108
             M+E EKKI T E+LER                                            
Sbjct:    45 MSESEKKILTEEELERKKKKEEKAKEKELKKQKALEKERLAELKAKQAKDGTNVPKKSAK 104

Query:   109 XXXXRDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNK 168
                 RD  E+N E+FVDPETPLGE+KR+S QMAK+Y+P++VEKSWY+WWE S  F AD K
Sbjct:   105 KSSKRDASEENPEDFVDPETPLGERKRLSSQMAKQYSPATVEKSWYAWWEKSDLFKADAK 164

Query:   169 SSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIATQVV 228
             SSKP FVIVLPPPNVTGALHIGHALT+AI+DTIIRW+RMSGYNALWVPG+DHAGIATQVV
Sbjct:   165 SSKPPFVIVLPPPNVTGALHIGHALTSAIEDTIIRWKRMSGYNALWVPGVDHAGIATQVV 224

Query:   229 VEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMDEKR 288
             VEKK+MR+R +TRHD+GRE+FV EVWKWK++YGGTIL Q RRLGASLDWSRECFTMDE+R
Sbjct:   225 VEKKIMRDRGMTRHDVGREEFVKEVWKWKNQYGGTILTQLRRLGASLDWSRECFTMDEQR 284

Query:   289 SKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVE 348
             SKAVTEAFVRLYKEGLIYRD+RLVNWDC+LRTAISD+EV+Y+DI ++ +  VPGYEK VE
Sbjct:   285 SKAVTEAFVRLYKEGLIYRDIRLVNWDCILRTAISDVEVEYIDIKEKTLLKVPGYEKPVE 344

Query:   349 FGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKI 408
             FG+LTSFAYPLEGGLGE++VATTRVETMLGDTAIAIHP+DARY HLHGKFA+HPFNGRK+
Sbjct:   345 FGLLTSFAYPLEGGLGEVIVATTRVETMLGDTAIAIHPDDARYKHLHGKFAVHPFNGRKL 404

Query:   409 PIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEFEGM 468
             PIICD ILVDP FGTG VKITPAHDPND +VGKRH LEFINIFTDDGKIN+NGG +F GM
Sbjct:   405 PIICDGILVDPNFGTGCVKITPAHDPNDCEVGKRHKLEFINIFTDDGKINTNGGSDFAGM 464

Query:   469 PRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAMEALY 528
             PRF AREAV EAL+K+GLYRGAK+NEMRLGLCSR+NDV+EPMIKPQWYVNC+ +  EAL 
Sbjct:   465 PRFAAREAVVEALQKQGLYRGAKNNEMRLGLCSRTNDVIEPMIKPQWYVNCSMIGKEALD 524

Query:   529 AVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGS 588
               + D+ KKLE +P+QYTAEWRRWLE IRDWC+SRQLWWGH+IPAWY TLE+D+LKE+G+
Sbjct:   525 VAITDENKKLEFVPKQYTAEWRRWLENIRDWCISRQLWWGHRIPAWYATLEEDQLKEVGA 584

Query:   589 YNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLK 648
             Y+DHW+VAR E +A   A +KF GKKFE+ +DPDVLDTWFSSGLFPLSVLGWPD TDD K
Sbjct:   585 YSDHWVVARTEDDAREEAAQKFLGKKFELTRDPDVLDTWFSSGLFPLSVLGWPDVTDDFK 644

Query:   649 AFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVI 708
             AFYPTSVLETGHDILFFWVARMVM+G+KLGGEVPF+KVY HPMIRDAHGRKMSKSLGNVI
Sbjct:   645 AFYPTSVLETGHDILFFWVARMVMMGMKLGGEVPFSKVYFHPMIRDAHGRKMSKSLGNVI 704

Query:   709 DPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVSYTA 768
             DPLEVING++LEGLHKRLEEGNLDPKE+ VAK+GQ  DFPNGIPECGTDALRFALVSYTA
Sbjct:   705 DPLEVINGVTLEGLHKRLEEGNLDPKEVIVAKEGQVKDFPNGIPECGTDALRFALVSYTA 764

Query:   769 QSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILSVLN 828
             QSDKINLDI RVVGYRQWCNKLWNAVRF+M KLG+G+ PP  L P  +PFSC+WILSVLN
Sbjct:   765 QSDKINLDILRVVGYRQWCNKLWNAVRFAMMKLGDGYTPPQTLSPETMPFSCQWILSVLN 824

Query:   829 KAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVL 888
             KAIS+T  SL+++EFSDAA+T+Y+WWQYQFCDV+IEAIKPYFAGDNP FASER+ AQH L
Sbjct:   825 KAISKTVVSLDAFEFSDAANTIYAWWQYQFCDVYIEAIKPYFAGDNPTFASERAHAQHAL 884

Query:   889 WVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEFEMD 948
             W+ LETGLRLLHPFMPFVTEELWQRLP PK    K SIM+C+YPSA+E W++E+ E EMD
Sbjct:   885 WISLETGLRLLHPFMPFVTEELWQRLPAPKDTERKASIMICDYPSAIENWSNEKVESEMD 944

Query:   949 LVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIXXXXXXXXXXXXX 1008
              V +TV+C+R+LRA +L KQKNERLPA A C+    SEI++SHELEI             
Sbjct:   945 TVLATVKCMRALRAGLLEKQKNERLPAFALCENNVTSEIVKSHELEIRTLANLSSLEVVS 1004

Query:  1009 XGTDEAPTDCAFQNVNENLKVYLKVE--VDIEAEREKIRTKLTETQKQREKLEKIINAPG 1066
              G   AP   + + VNENLKVYL+V+  ++ EAE+EKIR K+ E QKQ+EKL+K+++   
Sbjct:  1005 KGQHAAPPGSSVETVNENLKVYLEVDGAINTEAEQEKIRNKIGELQKQKEKLQKMMSVST 1064

Query:  1067 YQEKVPSRIQEDNAAKLAKLLQEIDFFENESNRL 1100
             Y+EKVP+ I+EDNA KLAK+LQE DFFE ES RL
Sbjct:  1065 YEEKVPANIKEDNANKLAKILQEFDFFEKESARL 1098

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004812 "aminoacyl-tRNA ligase activity" evidence=IEA;ISS

GO:0004832 "valine-tRNA ligase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA;ISS

GO:0005737 "cytoplasm" evidence=IEA

GO:0006418 "tRNA aminoacylation for protein translation" evidence=IEA;ISS

GO:0006438 "valyl-tRNA aminoacylation" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM;IDA

GO:0005739 "mitochondrion" evidence=IDA

GO:0009793 "embryo development ending in seed dormancy" evidence=IMP

GO:0005829 "cytosol" evidence=IDA

DICTYBASE\|DDB_G0277733 valS1 "valyl tRNA synthetase" [Dictyostelium discoideum (taxid:44689)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-010601-1 vars "valyl-tRNA synthetase" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

FB\|FBgn0027079 Aats-val "Valyl-tRNA synthetase" [Drosophila melanogaster (taxid:7227)]	Back alignment and assigned GO terms

UNIPROTKB\|E2RTJ7 VARS "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]	Back alignment and assigned GO terms

UNIPROTKB\|E1BLV6 VARS "Uncharacterized protein" [Bos taurus (taxid:9913)]	Back alignment and assigned GO terms

UNIPROTKB\|B0V043 VARS "Valine--tRNA ligase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|H0Y4A6 VARS "Valine--tRNA ligase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

UNIPROTKB\|P26640 VARS "Valine--tRNA ligase" [Homo sapiens (taxid:9606)]	Back alignment and assigned GO terms

MGI\|MGI:90675 Vars "valyl-tRNA synthetase" [Mus musculus (taxid:10090)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q63TI8	SYV_BURPS	6, ., 1, ., 1, ., 9	0.4038	0.8134	0.9403	yes	no
P07806	SYV_YEAST	6, ., 1, ., 1, ., 9	0.4853	0.8605	0.8605	yes	no
Q86KU2	SYVC_DICDI	6, ., 1, ., 1, ., 9	0.5223	0.8596	0.8852	yes	no
Q9Z1Q9	SYVC_MOUSE	6, ., 1, ., 1, ., 9	0.4859	0.9211	0.8052	yes	no
Q606C1	SYV_METCA	6, ., 1, ., 1, ., 9	0.4213	0.8125	0.9739	yes	no
Q66F11	SYV_YERPS	6, ., 1, ., 1, ., 9	0.4075	0.8179	0.9357	yes	no
Q9K1H7	SYV_NEIMB	6, ., 1, ., 1, ., 9	0.4062	0.8215	0.9597	yes	no
Q7MZ25	SYV_PHOLL	6, ., 1, ., 1, ., 9	0.4106	0.8179	0.9357	yes	no
Q4KHT9	SYV_PSEF5	6, ., 1, ., 1, ., 9	0.4140	0.8288	0.9651	yes	no
Q62KW5	SYV_BURMA	6, ., 1, ., 1, ., 9	0.4018	0.8134	0.9403	yes	no
Q3SL86	SYV_THIDA	6, ., 1, ., 1, ., 9	0.4226	0.8251	0.9989	yes	no
Q7NUM8	SYV_CHRVO	6, ., 1, ., 1, ., 9	0.4137	0.8134	0.9563	yes	no
P26640	SYVC_HUMAN	6, ., 1, ., 1, ., 9	0.5091	0.8623	0.7531	yes	no
O75005	SYV_SCHPO	6, ., 1, ., 1, ., 9	0.5287	0.7536	0.8489	yes	no
Q0AIF2	SYV_NITEC	6, ., 1, ., 1, ., 9	0.4261	0.8097	0.9749	yes	no
Q9JX22	SYV_NEIMA	6, ., 1, ., 1, ., 9	0.4059	0.8088	0.9449	yes	no
Q82X51	SYV_NITEU	6, ., 1, ., 1, ., 9	0.4334	0.8251	0.9923	yes	no
Q04462	SYVC_RAT	6, ., 1, ., 1, ., 9	0.4821	0.9239	0.8069	yes	no
Q88P76	SYV_PSEPK	6, ., 1, ., 1, ., 9	0.4064	0.8278	0.9641	yes	no
Q8ZBH1	SYV_YERPE	6, ., 1, ., 1, ., 9	0.4075	0.8179	0.9357	yes	no
Q5NXL5	SYV_AROAE	6, ., 1, ., 1, ., 9	0.4133	0.8297	0.9662	yes	no
A4G1V2	SYV_HERAR	6, ., 1, ., 1, ., 9	0.4095	0.8369	0.9535	yes	no
Q3JC50	SYV_NITOC	6, ., 1, ., 1, ., 9	0.4152	0.8333	0.9903	yes	no
Q9U1Q4	SYV_CAEEL	6, ., 1, ., 1, ., 9	0.4945	0.8831	0.9285	yes	no
Q5F5W0	SYV_NEIG1	6, ., 1, ., 1, ., 9	0.4012	0.8215	0.9597	yes	no
Q5NHZ4	SYV_FRATT	6, ., 1, ., 1, ., 9	0.4042	0.8179	0.9825	yes	no
Q9HXH0	SYV_PSEAE	6, ., 1, ., 1, ., 9	0.4164	0.8206	0.9536	yes	no
Q887M3	SYV_PSESM	6, ., 1, ., 1, ., 9	0.4010	0.8288	0.9651	yes	no
P93736	SYV_ARATH	6, ., 1, ., 1, ., 9	0.7440	0.9719	0.9684	yes	no
Q4ZXI0	SYV_PSEU2	6, ., 1, ., 1, ., 9	0.4030	0.8288	0.9651	yes	no
Q2YB22	SYV_NITMU	6, ., 1, ., 1, ., 9	0.4134	0.8197	0.9773	yes	no
A6SUQ8	SYV_JANMA	6, ., 1, ., 1, ., 9	0.4111	0.8269	0.9461	yes	no
Q9CMK5	SYV_PASMU	6, ., 1, ., 1, ., 9	0.4130	0.8152	0.9433	yes	no
Q0VSA8	SYV_ALCBS	6, ., 1, ., 1, ., 9	0.4176	0.8152	0.9667	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	6.1.1.9	0.979
3rd Layer	6.1.1	0.983

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1104
PLN02381		1066	PLN02381, PLN02381, valyl-tRNA synthetase	0.0
PTZ00419		995	PTZ00419, PTZ00419, valyl-tRNA synthetase-like pro	0.0
PRK05729		874	PRK05729, valS, valyl-tRNA synthetase; Reviewed	0.0
COG0525		877	COG0525, ValS, Valyl-tRNA synthetase [Translation,	0.0
TIGR00422		861	TIGR00422, valS, valyl-tRNA synthetase	0.0
PRK14900		1052	PRK14900, valS, valyl-tRNA synthetase; Provisional	0.0
PLN02943		958	PLN02943, PLN02943, aminoacyl-tRNA ligase	0.0
pfam00133		606	pfam00133, tRNA-synt_1, tRNA synthetases class I (	0.0
PRK13208		800	PRK13208, valS, valyl-tRNA synthetase; Reviewed	1e-155
cd00817		382	cd00817, ValRS_core, catalytic core domain of valy	1e-110
TIGR00392		861	TIGR00392, ileS, isoleucyl-tRNA synthetase	1e-106
COG0060		933	COG0060, IleS, Isoleucyl-tRNA synthetase [Translat	1e-96
cd00817		382	cd00817, ValRS_core, catalytic core domain of valy	4e-90
PRK06039		975	PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewe	2e-78
PRK05743		912	PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewe	3e-68
cd07962		135	cd07962, Anticodon_Ia_Val, Anticodon-binding domai	4e-55
PRK13804		961	PRK13804, ileS, isoleucyl-tRNA synthetase; Provisi	3e-50
COG0495		814	COG0495, LeuS, Leucyl-tRNA synthetase [Translation	2e-44
cd00668		312	cd00668, Ile_Leu_Val_MetRS_core, catalytic core do	3e-42
pfam08264		148	pfam08264, Anticodon_1, Anticodon-binding domain o	5e-38
PLN02843		974	PLN02843, PLN02843, isoleucyl-tRNA synthetase	1e-37
TIGR00395		938	TIGR00395, leuS_arch, leucyl-tRNA synthetase, arch	4e-37
PRK00390		805	PRK00390, leuS, leucyl-tRNA synthetase; Validated	4e-36
cd00668		312	cd00668, Ile_Leu_Val_MetRS_core, catalytic core do	4e-33
TIGR00396		842	TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba	2e-29
cd00818		338	cd00818, IleRS_core, catalytic core domain of isol	2e-27
PLN02563		963	PLN02563, PLN02563, aminoacyl-tRNA ligase	5e-27
PRK12300		897	PRK12300, leuS, leucyl-tRNA synthetase; Reviewed	1e-23
cd00818		338	cd00818, IleRS_core, catalytic core domain of isol	2e-22
cd07961		183	cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding	3e-18
PTZ00427		1205	PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati	2e-17
cd07960		180	cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding d	9e-17
cd00812		314	cd00812, LeuRS_core, catalytic core domain of leuc	8e-16
pfam13603		178	pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase,	2e-15
PLN02843		974	PLN02843, PLN02843, isoleucyl-tRNA synthetase	3e-13
PRK12300		897	PRK12300, leuS, leucyl-tRNA synthetase; Reviewed	3e-13
PLN02882		1159	PLN02882, PLN02882, aminoacyl-tRNA ligase	6e-13
PRK11893		511	PRK11893, PRK11893, methionyl-tRNA synthetase; Rev	7e-13
PTZ00427		1205	PTZ00427, PTZ00427, isoleucine-tRNA ligase, putati	1e-11
cd00814		319	cd00814, MetRS_core, catalytic core domain of meth	2e-11
COG0143		558	COG0143, MetG, Methionyl-tRNA synthetase [Translat	3e-11
TIGR00398		530	TIGR00398, metG, methionyl-tRNA synthetase	7e-11
pfam09334		388	pfam09334, tRNA-synt_1g, tRNA synthetases class I	7e-11
COG0143		558	COG0143, MetG, Methionyl-tRNA synthetase [Translat	8e-11
PRK11893		511	PRK11893, PRK11893, methionyl-tRNA synthetase; Rev	2e-09
PRK12267		648	PRK12267, PRK12267, methionyl-tRNA synthetase; Rev	5e-09
PLN02882		1159	PLN02882, PLN02882, aminoacyl-tRNA ligase	1e-08
TIGR00396		842	TIGR00396, leuS_bact, leucyl-tRNA synthetase, euba	1e-06
PRK12267		648	PRK12267, PRK12267, methionyl-tRNA synthetase; Rev	2e-06
PRK00390		805	PRK00390, leuS, leucyl-tRNA synthetase; Validated	3e-06
cd07959		117	cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding d	3e-06
TIGR00398		530	TIGR00398, metG, methionyl-tRNA synthetase	9e-06
PLN02882		1159	PLN02882, PLN02882, aminoacyl-tRNA ligase	3e-05
pfam12569		516	pfam12569, NARP1, NMDA receptor-regulated protein	6e-05
PRK12268		556	PRK12268, PRK12268, methionyl-tRNA synthetase; Rev	7e-05
pfam10458		66	pfam10458, Val_tRNA-synt_C, Valyl tRNA synthetase	9e-05
PLN02224		616	PLN02224, PLN02224, methionine-tRNA ligase	1e-04
PTZ00121		2084	PTZ00121, PTZ00121, MAEBL; Provisional	1e-04
cd00812		314	cd00812, LeuRS_core, catalytic core domain of leuc	2e-04
cd07958		117	cd07958, Anticodon_Ia_Leu_BEm, Anticodon-binding d	4e-04
cd07957		129	cd07957, Anticodon_Ia_Met, Anticodon-binding domai	0.001
pfam09334		388	pfam09334, tRNA-synt_1g, tRNA synthetases class I	0.002
pfam12569		516	pfam12569, NARP1, NMDA receptor-regulated protein	0.002
pfam05178		99	pfam05178, Kri1, KRI1-like family	0.002
cd07375		117	cd07375, Anticodon_Ia_like, Anticodon-binding doma	0.002
pfam06658		142	pfam06658, DUF1168, Protein of unknown function (D	0.002
PRK12280		158	PRK12280, rplW, 50S ribosomal protein L23; Reviewe	0.003

>gnl\|CDD\|215214 PLN02381, PLN02381, valyl-tRNA synthetase	Back alignment and domain information

 Score = 2007 bits (5200), Expect = 0.0
 Identities = 847/1057 (80%), Positives = 945/1057 (89%), Gaps = 4/1057 (0%)

Query: 48   SSIMTEPEKKIETAEDLERKKKKEEKAKEKELKKLKALEKAEQAKLKKQEQGGNSL--KK 105
            S   +E EKKI T E+LERKKKKEEKAKEKELKKLKA +K  +AKL+ Q+    +   KK
Sbjct: 2    SRTESEAEKKILTEEELERKKKKEEKAKEKELKKLKAAQKEAKAKLQAQQASDGTNVPKK 61

Query: 106  SVKKNVKRDDGEDNAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIA 165
            S KK+ KRD  ++N E+F+DP+TP G+KKR+S QMAK+Y+PS+VEKSWY+WWE SGYF A
Sbjct: 62   SEKKSRKRDVEDENPEDFIDPDTPFGQKKRLSSQMAKQYSPSAVEKSWYAWWEKSGYFGA 121

Query: 166  DNKSSKPSFVIVLPPPNVTGALHIGHALTTAIQDTIIRWRRMSGYNALWVPGMDHAGIAT 225
            D KSSKP FVIVLPPPNVTGALHIGHALT AI+DTIIRW+RMSGYNALWVPG+DHAGIAT
Sbjct: 122  DAKSSKPPFVIVLPPPNVTGALHIGHALTAAIEDTIIRWKRMSGYNALWVPGVDHAGIAT 181

Query: 226  QVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDWSRECFTMD 285
            QVVVEKKLMRER LTRHDIGRE+FVSEVWKWKDEYGGTIL Q RRLGASLDWSRECFTMD
Sbjct: 182  QVVVEKKLMRERHLTRHDIGREEFVSEVWKWKDEYGGTILNQLRRLGASLDWSRECFTMD 241

Query: 286  EKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEK 345
            E+RSKAVTEAFVRLYKEGLIYRD+RLVNWDC LRTAISD+EVDY+DI +R +  VPGY+K
Sbjct: 242  EQRSKAVTEAFVRLYKEGLIYRDIRLVNWDCTLRTAISDVEVDYIDIKERTLLKVPGYDK 301

Query: 346  QVEFGVLTSFAYPLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNG 405
             VEFGVLTSFAYPLEGGLGEIVVATTR+ETMLGDTAIAIHP+D RY HLHGKFA+HPFNG
Sbjct: 302  PVEFGVLTSFAYPLEGGLGEIVVATTRIETMLGDTAIAIHPDDERYKHLHGKFAVHPFNG 361

Query: 406  RKIPIICDAILVDPKFGTGAVKITPAHDPNDFDVGKRHNLEFINIFTDDGKINSNGGLEF 465
            RK+PIICDAILVDP FGTGAVKITPAHDPNDF+VGKRHNLEFINIFTDDGKINSNGG EF
Sbjct: 362  RKLPIICDAILVDPNFGTGAVKITPAHDPNDFEVGKRHNLEFINIFTDDGKINSNGGSEF 421

Query: 466  EGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYVNCNSMAME 525
             GMPRF AREAV EAL+KKGLYRGAK+NEMRLGLCSR+NDVVEPMIKPQW+VNC+SMA +
Sbjct: 422  AGMPRFAAREAVIEALQKKGLYRGAKNNEMRLGLCSRTNDVVEPMIKPQWFVNCSSMAKQ 481

Query: 526  ALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKE 585
            AL A +D + KKLE IP+QY AEW+RWLE IRDWC+SRQLWWGH+IPAWYVTLEDD+LKE
Sbjct: 482  ALDAAIDGENKKLEFIPKQYLAEWKRWLENIRDWCISRQLWWGHRIPAWYVTLEDDQLKE 541

Query: 586  LGSYNDHWIVARDEKEALAVANKKFSGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTD 645
            LGSYNDHW+VAR+E +AL  A++KF GKKFE+ QDPDVLDTWFSSGLFPLSVLGWPDDTD
Sbjct: 542  LGSYNDHWVVARNESDALLEASQKFPGKKFELSQDPDVLDTWFSSGLFPLSVLGWPDDTD 601

Query: 646  DLKAFYPTSVLETGHDILFFWVARMVMLGIKLGGEVPFTKVYLHPMIRDAHGRKMSKSLG 705
            DLKAFYPTSVLETGHDILFFWVARMVM+G++LGG+VPF KVYLHPMIRDAHGRKMSKSLG
Sbjct: 602  DLKAFYPTSVLETGHDILFFWVARMVMMGMQLGGDVPFRKVYLHPMIRDAHGRKMSKSLG 661

Query: 706  NVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGTDALRFALVS 765
            NVIDPLEVINGISLEGLHKRLEEGNLDPKEL VAK+GQK DFPNGI ECGTDALRFALVS
Sbjct: 662  NVIDPLEVINGISLEGLHKRLEEGNLDPKELVVAKEGQKKDFPNGIAECGTDALRFALVS 721

Query: 766  YTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLPFSCKWILS 825
            YTAQSDKINLDI RVVGYRQWCNKLWNAVRF+MSKLG+ + PP  L    +PFSCKWILS
Sbjct: 722  YTAQSDKINLDILRVVGYRQWCNKLWNAVRFAMSKLGDDYTPPATLSVETMPFSCKWILS 781

Query: 826  VLNKAISRTASSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQ 885
            VLNKAIS+T SSL++YEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNP FASER+AAQ
Sbjct: 782  VLNKAISKTVSSLDAYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPEFASERAAAQ 841

Query: 886  HVLWVCLETGLRLLHPFMPFVTEELWQRLPQPKGCATKESIMLCEYPSAVEGWTDERAEF 945
              LW+CL+TGLRLLHPFMPFVTEELWQRLPQPK    K+SIM+ EYPSAVE WT+E+ E+
Sbjct: 842  DTLWICLDTGLRLLHPFMPFVTEELWQRLPQPKDHTRKDSIMISEYPSAVEAWTNEKVEY 901

Query: 946  EMDLVESTVRCIRSLRAEVLGKQKNERLPAIAFCQTKGVSEIIRSHELEIVTLSTSSSLK 1005
            EMDLV STV+C+RSLRAEVL KQKNERLPA A C+ + ++ II+SH+LEI+TL+  SSLK
Sbjct: 902  EMDLVLSTVKCLRSLRAEVLEKQKNERLPAFALCRNQEIAAIIKSHQLEILTLANLSSLK 961

Query: 1006 VLLSGTDEAPTDCAFQNVNENLKVYLKVE--VDIEAEREKIRTKLTETQKQREKLEKIIN 1063
            VLLS  D  P  CAF+NVNENLKVYL+ +  V+ EAE EK+R K+ E QKQ+EKLEK +N
Sbjct: 962  VLLSENDAPPAGCAFENVNENLKVYLQAQGAVNAEAELEKLRNKMDEIQKQQEKLEKKMN 1021

Query: 1064 APGYQEKVPSRIQEDNAAKLAKLLQEIDFFENESNRL 1100
            A GY+EKVP+ IQE++A KL KLLQE++FFE ES RL
Sbjct: 1022 ASGYKEKVPANIQEEDARKLTKLLQELEFFEKESKRL 1058

Length = 1066

>gnl\|CDD\|240411 PTZ00419, PTZ00419, valyl-tRNA synthetase-like protein; Provisional	Back alignment and domain information

>gnl\|CDD\|235582 PRK05729, valS, valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|223599 COG0525, ValS, Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|232969 TIGR00422, valS, valyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|237855 PRK14900, valS, valyl-tRNA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|215509 PLN02943, PLN02943, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|215739 pfam00133, tRNA-synt_1, tRNA synthetases class I (I, L, M and V)	Back alignment and domain information

>gnl\|CDD\|237306 PRK13208, valS, valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|232953 TIGR00392, ileS, isoleucyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|223138 COG0060, IleS, Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|185677 cd00817, ValRS_core, catalytic core domain of valyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|235681 PRK06039, ileS, isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|235588 PRK05743, ileS, isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|153416 cd07962, Anticodon_Ia_Val, Anticodon-binding domain of valyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|237514 PRK13804, ileS, isoleucyl-tRNA synthetase; Provisional	Back alignment and domain information

>gnl\|CDD\|223569 COG0495, LeuS, Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|219767 pfam08264, Anticodon_1, Anticodon-binding domain of tRNA	Back alignment and domain information

>gnl\|CDD\|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|232955 TIGR00395, leuS_arch, leucyl-tRNA synthetase, archaeal and cytosolic family	Back alignment and domain information

>gnl\|CDD\|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|185674 cd00668, Ile_Leu_Val_MetRS_core, catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family	Back alignment and domain information

>gnl\|CDD\|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|178177 PLN02563, PLN02563, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|173909 cd00818, IleRS_core, catalytic core domain of isoleucyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|153415 cd07961, Anticodon_Ia_Ile_ABEc, Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional	Back alignment and domain information

>gnl\|CDD\|153414 cd07960, Anticodon_Ia_Ile_BEm, Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|222257 pfam13603, tRNA-synt_1_2, Leucyl-tRNA synthetase, Domain 2	Back alignment and domain information

>gnl\|CDD\|215452 PLN02843, PLN02843, isoleucyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|237049 PRK12300, leuS, leucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|173617 PTZ00427, PTZ00427, isoleucine-tRNA ligase, putative; Provisional	Back alignment and domain information

>gnl\|CDD\|173907 cd00814, MetRS_core, catalytic core domain of methioninyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|232957 TIGR00398, metG, methionyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M)	Back alignment and domain information

>gnl\|CDD\|223221 COG0143, MetG, Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>gnl\|CDD\|237012 PRK11893, PRK11893, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|232956 TIGR00396, leuS_bact, leucyl-tRNA synthetase, eubacterial and mitochondrial family	Back alignment and domain information

>gnl\|CDD\|237028 PRK12267, PRK12267, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|234743 PRK00390, leuS, leucyl-tRNA synthetase; Validated	Back alignment and domain information

>gnl\|CDD\|153413 cd07959, Anticodon_Ia_Leu_AEc, Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|232957 TIGR00398, metG, methionyl-tRNA synthetase	Back alignment and domain information

>gnl\|CDD\|215477 PLN02882, PLN02882, aminoacyl-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1	Back alignment and domain information

>gnl\|CDD\|237029 PRK12268, PRK12268, methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>gnl\|CDD\|151031 pfam10458, Val_tRNA-synt_C, Valyl tRNA synthetase tRNA binding arm	Back alignment and domain information

>gnl\|CDD\|177869 PLN02224, PLN02224, methionine-tRNA ligase	Back alignment and domain information

>gnl\|CDD\|173412 PTZ00121, PTZ00121, MAEBL; Provisional	Back alignment and domain information

>gnl\|CDD\|173906 cd00812, LeuRS_core, catalytic core domain of leucyl-tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|153412 cd07958, Anticodon_Ia_Leu_BEm, Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|153411 cd07957, Anticodon_Ia_Met, Anticodon-binding domain of methionyl tRNA synthetases	Back alignment and domain information

>gnl\|CDD\|220185 pfam09334, tRNA-synt_1g, tRNA synthetases class I (M)	Back alignment and domain information

>gnl\|CDD\|221641 pfam12569, NARP1, NMDA receptor-regulated protein 1	Back alignment and domain information

>gnl\|CDD\|218482 pfam05178, Kri1, KRI1-like family	Back alignment and domain information

>gnl\|CDD\|153408 cd07375, Anticodon_Ia_like, Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains	Back alignment and domain information

>gnl\|CDD\|219124 pfam06658, DUF1168, Protein of unknown function (DUF1168)	Back alignment and domain information

>gnl\|CDD\|237035 PRK12280, rplW, 50S ribosomal protein L23; Reviewed	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1104
KOG0432		995	consensus Valyl-tRNA synthetase [Translation, ribo	100.0
PLN02381		1066	valyl-tRNA synthetase	100.0
COG0525		877	ValS Valyl-tRNA synthetase [Translation, ribosomal	100.0
PTZ00419		995	valyl-tRNA synthetase-like protein; Provisional	100.0
PRK05729		874	valS valyl-tRNA synthetase; Reviewed	100.0
PLN02943		958	aminoacyl-tRNA ligase	100.0
PRK14900		1052	valS valyl-tRNA synthetase; Provisional	100.0
TIGR00422		861	valS valyl-tRNA synthetase. The valyl-tRNA synthet	100.0
PTZ00427		1205	isoleucine-tRNA ligase, putative; Provisional	100.0
PRK06039		975	ileS isoleucyl-tRNA synthetase; Reviewed	100.0
PLN02882		1159	aminoacyl-tRNA ligase	100.0
PRK05743		912	ileS isoleucyl-tRNA synthetase; Reviewed	100.0
PRK13804		961	ileS isoleucyl-tRNA synthetase; Provisional	100.0
PLN02843		974	isoleucyl-tRNA synthetase	100.0
PRK13208		800	valS valyl-tRNA synthetase; Reviewed	100.0
COG0060		933	IleS Isoleucyl-tRNA synthetase [Translation, ribos	100.0
TIGR00392		861	ileS isoleucyl-tRNA synthetase. The isoleucyl tRNA	100.0
PLN02959		1084	aminoacyl-tRNA ligase	100.0
TIGR00395		938	leuS_arch leucyl-tRNA synthetase, archaeal and cyt	100.0
PF00133		601	tRNA-synt_1: tRNA synthetases class I (I, L, M and	100.0
PRK12300		897	leuS leucyl-tRNA synthetase; Reviewed	100.0
TIGR00396		842	leuS_bact leucyl-tRNA synthetase, eubacterial and	100.0
PRK00390		805	leuS leucyl-tRNA synthetase; Validated	100.0
PLN02563		963	aminoacyl-tRNA ligase	100.0
KOG0433		937	consensus Isoleucyl-tRNA synthetase [Translation,	100.0
KOG0434		1070	consensus Isoleucyl-tRNA synthetase [Translation,	100.0
COG0495		814	LeuS Leucyl-tRNA synthetase [Translation, ribosoma	100.0
KOG0435		876	consensus Leucyl-tRNA synthetase [Translation, rib	100.0
PRK12268		556	methionyl-tRNA synthetase; Reviewed	100.0
TIGR00398		530	metG methionyl-tRNA synthetase. The methionyl-tRNA	100.0
cd00817		382	ValRS_core catalytic core domain of valyl-tRNA syn	100.0
PRK00133		673	metG methionyl-tRNA synthetase; Reviewed	100.0
PRK12267		648	methionyl-tRNA synthetase; Reviewed	100.0
PLN02610		801	probable methionyl-tRNA synthetase	100.0
KOG0437		1080	consensus Leucyl-tRNA synthetase [Translation, rib	100.0
PRK11893		511	methionyl-tRNA synthetase; Reviewed	100.0
PLN02224		616	methionine-tRNA ligase	100.0
COG0143		558	MetG Methionyl-tRNA synthetase [Translation, ribos	100.0
cd00818		338	IleRS_core catalytic core domain of isoleucyl-tRNA	100.0
cd00668		312	Ile_Leu_Val_MetRS_core catalytic core domain of is	100.0
KOG0436		578	consensus Methionyl-tRNA synthetase [Translation,	100.0
PF09334		391	tRNA-synt_1g: tRNA synthetases class I (M); InterP	100.0
cd00814		319	MetRS_core catalytic core domain of methioninyl-tR	100.0
cd00812		314	LeuRS_core catalytic core domain of leucyl-tRNA sy	100.0
KOG1247		567	consensus Methionyl-tRNA synthetase [Translation,	100.0
PRK00260		463	cysS cysteinyl-tRNA synthetase; Validated	100.0
PTZ00399		651	cysteinyl-tRNA-synthetase; Provisional	100.0
TIGR00435		465	cysS cysteinyl-tRNA synthetase. This model finds t	100.0
PRK12418		384	cysteinyl-tRNA synthetase; Provisional	100.0
TIGR03447		411	mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-	100.0
PRK14536		490	cysS cysteinyl-tRNA synthetase; Provisional	100.0
PLN02946		557	cysteine-tRNA ligase	99.98
PRK14535		699	cysS cysteinyl-tRNA synthetase; Provisional	99.97
cd00672		213	CysRS_core catalytic core domain of cysteinyl tRNA	99.97
PRK01611		507	argS arginyl-tRNA synthetase; Reviewed	99.96
PRK14534		481	cysS cysteinyl-tRNA synthetase; Provisional	99.96
cd00674		353	LysRS_core_class_I catalytic core domain of class	99.94
cd07961		183	Anticodon_Ia_Ile_ABEc Anticodon-binding domain of	99.94
cd07960		180	Anticodon_Ia_Ile_BEm Anticodon-binding domain of b	99.92
COG0215		464	CysS Cysteinyl-tRNA synthetase [Translation, ribos	99.92
PRK00750		510	lysK lysyl-tRNA synthetase; Reviewed	99.89
PF01406		300	tRNA-synt_1e: tRNA synthetases class I (C) catalyt	99.89
PF08264		153	Anticodon_1: Anticodon-binding domain of tRNA; Int	99.88
PF13603		185	tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; P	99.87
TIGR00456		566	argS arginyl-tRNA synthetase. This model recognize	99.87
KOG2007		586	consensus Cysteinyl-tRNA synthetase [Translation,	99.85
COG0018		577	ArgS Arginyl-tRNA synthetase [Translation, ribosom	99.76
TIGR00467		515	lysS_arch lysyl-tRNA synthetase, archaeal and spir	99.75
PRK12451		562	arginyl-tRNA synthetase; Reviewed	99.7
cd07962		135	Anticodon_Ia_Val Anticodon-binding domain of valyl	99.66
PLN02286		576	arginine-tRNA ligase	99.65
cd00671		212	ArgRS_core catalytic core domain of arginyl-tRNA s	99.63
cd07959		117	Anticodon_Ia_Leu_AEc Anticodon-binding domain of a	99.6
cd07958		117	Anticodon_Ia_Leu_BEm Anticodon-binding domain of b	99.55
cd07957		129	Anticodon_Ia_Met Anticodon-binding domain of methi	99.51
PF10458		66	Val_tRNA-synt_C: Valyl tRNA synthetase tRNA bindin	99.32
PF00750		354	tRNA-synt_1d: tRNA synthetases class I (R); InterP	99.32
cd07375		117	Anticodon_Ia_like Anticodon-binding domain of clas	99.23
cd00802		143	class_I_aaRS_core catalytic core domain of class I	99.07
PF01921		360	tRNA-synt_1f: tRNA synthetases class I (K); InterP	98.7
PRK04156		567	gltX glutamyl-tRNA synthetase; Provisional	98.66
COG1384		521	LysS Lysyl-tRNA synthetase (class I) [Translation,	98.47
PRK01406		476	gltX glutamyl-tRNA synthetase; Reviewed	98.25
cd09287		240	GluRS_non_core catalytic core domain of non-discri	98.0
TIGR03838		272	queuosine_YadB glutamyl-queuosine tRNA(Asp) synthe	97.57
PLN03233		523	putative glutamate-tRNA ligase; Provisional	97.55
PTZ00437		574	glutaminyl-tRNA synthetase; Provisional	97.53
TIGR00463		560	gltX_arch glutamyl-tRNA synthetase, archaeal and e	97.47
PF00749		314	tRNA-synt_1c: tRNA synthetases class I (E and Q),	97.42
PLN02907		722	glutamate-tRNA ligase	97.41
PTZ00402		601	glutamyl-tRNA synthetase; Provisional	97.39
TIGR00440		522	glnS glutaminyl-tRNA synthetase. This protein is a	97.37
cd00807		238	GlnRS_core catalytic core domain of glutaminyl-tRN	97.37
PRK05347		554	glutaminyl-tRNA synthetase; Provisional	97.3
PRK14895		513	gltX glutamyl-tRNA synthetase; Provisional	97.29
PLN02859		788	glutamine-tRNA ligase	97.29
PRK05710		299	glutamyl-Q tRNA(Asp) synthetase; Reviewed	97.27
PRK12410		433	glutamylglutaminyl-tRNA synthetase; Provisional	97.25
PRK12558		445	glutamyl-tRNA synthetase; Provisional	97.25
KOG4426		656	consensus Arginyl-tRNA synthetase [Translation, ri	97.23
COG0008		472	GlnS Glutamyl- and glutaminyl-tRNA synthetases [Tr	97.23
TIGR00464		470	gltX_bact glutamyl-tRNA synthetase, bacterial fami	97.16
PRK14703		771	glutaminyl-tRNA synthetase/YqeY domain fusion prot	97.14
cd00418		230	GlxRS_core catalytic core domain of glutamyl-tRNA	96.99
cd00808		239	GluRS_core catalytic core domain of discriminating	96.94
PLN02627		535	glutamyl-tRNA synthetase	96.92
cd07956		156	Anticodon_Ia_Arg Anticodon-binding domain of argin	95.83
KOG1147		712	consensus Glutamyl-tRNA synthetase [Translation, r	95.19
cd00395		273	Tyr_Trp_RS_core catalytic core domain of tyrosinyl	95.05
PRK13354		410	tyrosyl-tRNA synthetase; Provisional	95.02
cd00805		269	TyrRS_core catalytic core domain of tyrosinyl-tRNA	94.97
PRK05912		408	tyrosyl-tRNA synthetase; Validated	94.29
PF00579		292	tRNA-synt_1b: tRNA synthetases class I (W and Y);	93.39
KOG1195		567	consensus Arginyl-tRNA synthetase [Translation, ri	92.93
PRK12556		332	tryptophanyl-tRNA synthetase; Provisional	92.91
cd00802		143	class_I_aaRS_core catalytic core domain of class I	92.74
cd00418		230	GlxRS_core catalytic core domain of glutamyl-tRNA	92.15
COG0495		814	LeuS Leucyl-tRNA synthetase [Translation, ribosoma	91.45
PRK12284		431	tryptophanyl-tRNA synthetase; Reviewed	91.45
PLN02563		963	aminoacyl-tRNA ligase	91.27
KOG1148		764	consensus Glutaminyl-tRNA synthetase [Translation,	91.18
PRK08560		329	tyrosyl-tRNA synthetase; Validated	90.85
TIGR00233		328	trpS tryptophanyl-tRNA synthetase. This model repr	89.94
cd00808		239	GluRS_core catalytic core domain of discriminating	89.8
TIGR00396		842	leuS_bact leucyl-tRNA synthetase, eubacterial and	89.75
COG0162		401	TyrS Tyrosyl-tRNA synthetase [Translation, ribosom	89.73
PRK12285		368	tryptophanyl-tRNA synthetase; Reviewed	89.44
PRK12282		333	tryptophanyl-tRNA synthetase II; Reviewed	89.13
COG0180		314	TrpS Tryptophanyl-tRNA synthetase [Translation, ri	89.08
PRK14900		1052	valS valyl-tRNA synthetase; Provisional	88.04
PTZ00126		383	tyrosyl-tRNA synthetase; Provisional	87.52
TIGR00234		377	tyrS tyrosyl-tRNA synthetase. This tyrosyl-tRNA sy	87.49
PF15188		85	CCDC-167: Coiled-coil domain-containing protein 16	87.48
cd00806		280	TrpRS_core catalytic core domain of tryptophanyl-t	87.23
PRK12283		398	tryptophanyl-tRNA synthetase; Reviewed	86.0
PRK00390		805	leuS leucyl-tRNA synthetase; Validated	84.32
PRK00927		333	tryptophanyl-tRNA synthetase; Reviewed	84.22
KOG0435		876	consensus Leucyl-tRNA synthetase [Translation, rib	83.27
TIGR00464		470	gltX_bact glutamyl-tRNA synthetase, bacterial fami	83.02
PRK12285		368	tryptophanyl-tRNA synthetase; Reviewed	80.86

>KOG0432 consensus Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

Probab=100.00  E-value=9.2e-256  Score=2202.11  Aligned_cols=967  Identities=58%  Similarity=0.995  Sum_probs=926.9

Q ss_pred             CCccccCCCCCcccccccchhhhcCCCchhHHHHHHHHHHhcCCcccCCC-CCCCcEEEECCCCCCCCCCCcchhHHhHH
Q 001303          119 NAEEFVDPETPLGEKKRMSKQMAKEYNPSSVEKSWYSWWENSGYFIADNK-SSKPSFVIVLPPPNVTGALHIGHALTTAI  197 (1104)
Q Consensus       119 ~~~~~~~~~t~~~~~~~~~~~~~~~y~p~~iE~~~~~~W~~~~~f~~~~~-~~k~~f~i~~pPPy~nG~LHiGHal~~~i  197 (1104)
                      ++...+.+.|+.|+|+++..++++.|+|..||.+||.||+++|+|+++.. ...+.|+|+.||||+||.||||||++.++
T Consensus        21 ~~~~~~~~~t~~ge~k~~~~~~~~~y~p~~vE~~wy~ww~k~g~fkp~~~~~~~~~f~i~~PPPNVTG~LHiGHALt~ai  100 (995)
T KOG0432|consen   21 EEVASYVPSTAPGEKKDLSGPLPAAYSPAYVESAWYKWWEKQGFFKPEYGPNPGGVFVIPLPPPNVTGSLHIGHALTVAI  100 (995)
T ss_pred             CCcccccCCCCcchhhccCCcccccCCccchHHHHHHHHHHcCCCCcccCCCCCCcceeecCCCCcccccchhHHHHHHH
Confidence            45678899999999999999999999999999999999999999999875 34679999999999999999999999999


Q ss_pred             HHHHHHHHHHCCCeeeEeccCCCcCChHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Q 001303          198 QDTIIRWRRMSGYNALWVPGMDHAGIATQVVVEKKLMRERKLTRHDIGREQFVSEVWKWKDEYGGTILRQQRRLGASLDW  277 (1104)
Q Consensus       198 ~D~~~Ry~rm~G~~Vl~~~G~D~~Glp~q~~vek~l~~~~g~~~~~~~re~f~~~~~~~~~~~~~~i~~ql~~lG~s~DW  277 (1104)
                      +|+++||+||.||+|+|+||+||+||+||++|||+|+++.|++||++||++|+++||+|+++++.+|.+||++||+|+||
T Consensus       101 qD~i~R~~rm~G~~vlw~PG~DHAGIATQ~VVEK~l~~~~~~~Rh~lgRe~F~~~vw~Wk~e~g~~I~~Qlk~lGas~DW  180 (995)
T KOG0432|consen  101 QDALARYNRMHGYQVLWVPGTDHAGIATQVVVEKQLAREGGKTRHDLGREEFLKEVWEWKEEYGGRIYNQLKRLGASLDW  180 (995)
T ss_pred             HHHHHHHHHhcCCeeeecCCccccchhHHHHHHHHHHHhcCcchhhcCHHHHHHHHHHHHHHhCccHHHHHHHhcCcccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccccCChhhHHHHHHHHHHHHhcCcEEEccEeeeecCCCCcccccccccccccCcceEEeecCcccccccceEeeEee
Q 001303          278 SRECFTMDEKRSKAVTEAFVRLYKEGLIYRDLRLVNWDCVLRTAISDIEVDYVDIPKREMRNVPGYEKQVEFGVLTSFAY  357 (1104)
Q Consensus       278 ~r~~~T~d~~~~~~v~~~F~~L~~~GlIyr~~~~v~wcp~~~TaLsd~EVe~~~~~~~t~~~~~~y~~~~~~g~l~~~~~  357 (1104)
                      +|++|||||..+++|.++|++||++|+|||+.++|||||.++|+|||+||+++++.+++++.||||+.+|+||+|++|+|
T Consensus       181 ~re~fTmD~~~s~AV~eAFvrL~eeglIyR~~rlVNW~~~L~saiSdiEVe~~ei~~~t~l~vpGyd~~VeFG~L~~faY  260 (995)
T KOG0432|consen  181 DREAFTMDPKLSRAVTEAFVRLHEEGLIYRANRLVNWCPALRSAISDIEVESVEIPGRTLLSVPGYDTKVEFGVLYSFAY  260 (995)
T ss_pred             cHhhcccCHHHHHHHHHHHHHHHhcCceEecCceeeechhHHhhhhhheecceecCCCceEecCCCCcceeeeeeeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ecCCCcceEEEeeccccccccCceEEecCCccccccccCcEeecCCCCCceeEEecCccccCCCCCCceecCCCCCcchH
Q 001303          358 PLEGGLGEIVVATTRVETMLGDTAIAIHPEDARYSHLHGKFAIHPFNGRKIPIICDAILVDPKFGTGAVKITPAHDPNDF  437 (1104)
Q Consensus       358 ~l~~~~~~l~vaTTrPeTl~g~~aiaV~P~d~ry~~l~G~~~~~P~~~~~ipIi~d~~~V~~~~GTG~V~~~Pahd~~D~  437 (1104)
                      ++.|+++.|+|+|||||||+||+||||||+|+||+|++|++++|||+++.+|||+|.+ |||+|||||||||||||++||
T Consensus       261 ~v~gs~~~i~VaTTRpET~lGDvAvAVhP~D~RYk~lhGk~~~hP~~~r~lPiI~D~~-Vd~~fGTGaVKITPaHd~nDy  339 (995)
T KOG0432|consen  261 PVEGSDEEIVVATTRPETILGDVAVAVHPDDDRYKHLHGKFVKHPFTGRKLPIICDIA-VDMEFGTGAVKITPAHDPNDY  339 (995)
T ss_pred             eccCCCCeEEEecCCccccccceeEEeCCCCcccccccCceeecCCCCCccceeeccc-ccccccccceEecCCCChhHH
Confidence            9999999999999999999999999999999999999999999999999999999985 999999999999999999999


Q ss_pred             HHHHHhCCccceecCCCCccccCCCCCCCCCchhhHHHHHHHHHHHcCCeeeeecccccccccccCCCeeeecccccccc
Q 001303          438 DVGKRHNLEFINIFTDDGKINSNGGLEFEGMPRFKAREAVNEALKKKGLYRGAKDNEMRLGLCSRSNDVVEPMIKPQWYV  517 (1104)
Q Consensus       438 ~~~~~~~L~~~~iid~~G~~~~~~g~~~~Gl~~~~ar~~vi~~L~~~g~l~~~~~~~~~~p~c~Rs~~~ie~~~~~QWFl  517 (1104)
                      ++|+||||++++||++||.|++.|| +|.||+||+||++|++.|++.|++++.++|+|.+|+|+||||+|||+++|||||
T Consensus       340 EvgkRh~L~~~ni~~~dG~l~~~~g-ef~Gm~RFeAR~kvv~~L~e~gL~~g~~~h~mvlpiCSRsgDVIEpllkpQW~v  418 (995)
T KOG0432|consen  340 EVGKRHNLEFINIFTDDGLLNNVCG-EFKGMKRFEAREKVVEKLKELGLYVGKENHPMVLPICSRSGDVIEPLLKPQWFV  418 (995)
T ss_pred             HHHHhcCCCceeEEcCCCceeccch-hccCcHHHHHHHHHHHHHHHhhhhhccCCCceeccccCCCCCcccccccchhee
Confidence            9999999999999999999999999 999999999999999999999999999999999999999999999999999999


Q ss_pred             ccchHHHHHHHhhhccCCCceEEeccccHHHHHHHhccCCCeeeeccCCCcccceEEEEccCcchhhccCCCCCceEEec
Q 001303          518 NCNSMAMEALYAVMDDDKKKLELIPRQYTAEWRRWLEAIRDWCVSRQLWWGHQIPAWYVTLEDDELKELGSYNDHWIVAR  597 (1104)
Q Consensus       518 ~~~~~~~~~~~~v~~~~~~~i~~~P~~~~~~~~~wl~~l~DWcISRq~~WG~pIP~~~~~~~~~~~~~~~~~~~~~~~~~  597 (1104)
                      +|++|+++|++++   ++|+++|.|+.++++|.+|++|++|||||||+||||+||+|++...++     ..+.++|++|+
T Consensus       419 ~c~ema~~A~~av---~sG~L~i~P~~~~k~w~~W~~~i~DWCiSRQLWWGHrIPAy~v~~~~~-----~~ee~~Wvvar  490 (995)
T KOG0432|consen  419 SCKEMAKKALKAV---ESGKLEILPEFHEKEWYRWLENIRDWCISRQLWWGHRIPAYFVNLSDG-----RAEEDYWVVAR  490 (995)
T ss_pred             ehHHHHHHHHHHH---hcCCeEECchHHHHHHHHHHhhccccchhhhhhhccccceeeeecccC-----CCccceeEEeC
Confidence            9999999999999   999999999999999999999999999999999999999999976532     23457999999


Q ss_pred             CHHHHHHHHhhhc-CCCCcccccCCCceeeEeccCCcccccccCCCCChhhhhhCCcCcccccccccccHHHHHHHHHHh
Q 001303          598 DEKEALAVANKKF-SGKKFEMCQDPDVLDTWFSSGLFPLSVLGWPDDTDDLKAFYPTSVLETGHDILFFWVARMVMLGIK  676 (1104)
Q Consensus       598 ~~~e~~~~~~~~~-~~~~~~l~~d~dvlDtWFdS~l~p~s~~g~p~~~~d~~~~~P~d~~~~G~Dil~fW~arm~~~~~~  676 (1104)
                      ++++|++++..++ |+..++++||+||||||||||+||||++|||++++||..|||.++++||+||+||||+||+|+|+.
T Consensus       491 seeeA~ekaa~k~g~~~~~~L~qDpDVLDTWFSS~L~PfS~lGWP~~t~d~~~fyP~sllETG~DILfFWVaRMvmLg~k  570 (995)
T KOG0432|consen  491 SEEEAREKAAEKFGPGKEFTLEQDPDVLDTWFSSGLWPFSTLGWPEETKDFKNFYPLSLLETGHDILFFWVARMVMLGLK  570 (995)
T ss_pred             CHHHHHHHHHHHhCCcccceeecCccHHHhhhhcccccchhcCCccccccHHhcCCchhhhcCchHHHHHHHHHHHhhhh
Confidence            9999999999999 788999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCCCCceEEEEccceeCCCCccccccCCCccCccccccccCchhHHHHhhcCCCChHHHHHHHhccCCCCCCCCCCCCc
Q 001303          677 LGGEVPFTKVYLHPMIRDAHGRKMSKSLGNVIDPLEVINGISLEGLHKRLEEGNLDPKELEVAKKGQKADFPNGIPECGT  756 (1104)
Q Consensus       677 l~g~~PFk~V~~Hg~v~D~~G~KMSKS~GNvIdP~dii~g~~l~~l~~~l~~~~l~~~e~~~a~~~~~~~fp~~i~~yGa  756 (1104)
                      |+|++||++|++||||||.+|||||||+||||||+|||+|++|++|+.+|++|||||+|+++|++||+++||||||+||+
T Consensus       571 LtG~lPF~~V~LH~mVRDa~GRKMSKSLGNVIDPlDVI~Gisle~L~~~L~~gNLdp~Ev~~a~~gq~kdFPnGIpeCGt  650 (995)
T KOG0432|consen  571 LTGELPFKEVLLHGLVRDAHGRKMSKSLGNVIDPLDVIDGISLEKLHAKLLSGNLDPREVEKAKKGQKKDFPNGIPECGT  650 (995)
T ss_pred             hcCCCCchheeechhhccccccccchhhccccCHHHHhccccHHHHHHHHHcCCCCHHHHHHHHHHHHhhcCCCCcccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHHhccCcccccccchHHHHHHHHHHHHHHHHHHHHhhhhCCCCCCCCCCCCCCCC-hhhHHHHHHHHHHHHHHH
Q 001303          757 DALRFALVSYTAQSDKINLDIQRVVGYRQWCNKLWNAVRFSMSKLGEGFVPPLKLHPHNLP-FSCKWILSVLNKAISRTA  835 (1104)
Q Consensus       757 DalR~~L~~~~~~~~di~f~~~~i~~~r~f~nKl~N~~rf~l~~~~~~~~p~~~~~~~~~~-~~D~wils~L~~~v~~v~  835 (1104)
                      |||||+||+++.+++|||+|++++.+||+|||||||+.||+++.++++|.|.........+ ..|+||+++|+.+++.++
T Consensus       651 DALRFaL~s~~~~~~dInLDv~rv~g~r~FcNKlWNa~rF~l~~lg~~~~p~~~~~~~~~~~~~d~WIlsrL~~av~~~~  730 (995)
T KOG0432|consen  651 DALRFALCSYTTQGRDINLDVLRVEGYRHFCNKLWNATRFALQRLGENFVPSPTEDLSGNESLVDEWILSRLAEAVEEVN  730 (995)
T ss_pred             HHHHHHHHHccccCccccccHHHHhhHHHHHHHHHHHHHHHHHhcccCCCCCcccccCCCcchhHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999999999999999988888887654444333 399999999999999999


Q ss_pred             HHHhcCCHHHHHHHHHHHHHhhHhHHHHHhhcccccCCCcccHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHCC
Q 001303          836 SSLNSYEFSDAASTVYSWWQYQFCDVFIEAIKPYFAGDNPAFASERSAAQHVLWVCLETGLRLLHPFMPFVTEELWQRLP  915 (1104)
Q Consensus       836 ~~~e~~~f~~a~~~i~~f~~~~~~n~Yie~~K~~l~~~~~~~~~~r~~a~~~L~~~l~~~l~LL~PfmPfitEeLwq~L~  915 (1104)
                      ++|++|+|+.|++++|+||++++||+|+|.+||.+++++..   .+..+..||+.||+.+|+||||||||+||||||+||
T Consensus       731 ~~~~~~~f~~at~a~~~Fwl~~lCDVYlE~~Kp~l~~~~~~---~~~~a~~vL~~~ld~gLrll~PfMPFvtEel~qrlP  807 (995)
T KOG0432|consen  731 ESLEARNFHLATSALYAFWLYDLCDVYLEATKPLLWGDSEA---LAYEARRVLYRCLDNGLRLLHPFMPFITEELWQRLP  807 (995)
T ss_pred             hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHhcCCcHH---HHHHHHHHHHHHHHHHHHHhcCcccccHHHHHHhcc
Confidence            99999999999999999999999999999999999887644   677889999999999999999999999999999999


Q ss_pred             CCCCCCCCCCcccccCCCCCCCCCcHHhHHHhHHHHHHHHHHHHHHHHhhccCCC--CcccEEEEecChhHHHHHHHHHH
Q 001303          916 QPKGCATKESIMLCEYPSAVEGWTDERAEFEMDLVESTVRCIRSLRAEVLGKQKN--ERLPAIAFCQTKGVSEIIRSHEL  993 (1104)
Q Consensus       916 ~~~~~~~~~SI~~~~wP~~~e~~~d~~~e~~~e~i~~ii~~iRslr~~~~~k~i~--~~~~~~I~~~~~~~~~~l~~~~~  993 (1104)
                      .+.+ ....||+.++||...+.|.|+++|..|+.+++++..+|++|+.|   +++  .+..+++...++....+++.+.+
T Consensus       808 ~r~~-~~~~si~va~yP~~~~~~~~~e~E~~~~~v~~i~~~iRslra~y---~l~~~~~~~v~~~~s~~~~~~~~~~~~~  883 (995)
T KOG0432|consen  808 RRKG-SKPASISVSPYPSSNELWRNEELESAFELVLAITRAIRSLRAEY---NLSPKPRGSVFIASSDEEDKSILKEFLD  883 (995)
T ss_pred             cCCC-CCCCceEecCCCchhcccCCHHHHHHHHHHHHHHHHHHHHHHhc---CCCCCCceEEEEecCCCcchhHHHHHHH
Confidence            8765 35569999999988889999999999999999999999999999   884  35566776666555678999999


Q ss_pred             HHHhhhccceEEEeccCCCCCCCCceEEeeeCCEEEEEecc--ccHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCccccC
Q 001303          994 EIVTLSTSSSLKVLLSGTDEAPTDCAFQNVNENLKVYLKVE--VDIEAEREKIRTKLTETQKQREKLEKIINAPGYQEKV 1071 (1104)
Q Consensus       994 ~I~~L~~v~~v~i~~~~~~~~p~~~~~~~v~~~~~v~l~l~--vd~~~E~~kL~kkl~kl~k~i~~l~~kl~n~~f~~ka 1071 (1104)
                      .|.++.+++.+.++.+ .+..|.||+..++++.+.|||+++  +|++.|+.+|+||+.|+|+++++++.++++++|..||
T Consensus       884 ~i~~l~~~~~v~i~~~-~~~~~~g~~~~~~~~~~~v~l~l~g~vd~~~e~~kl~kkl~klqk~~~~l~~r~~~~~~~~k~  962 (995)
T KOG0432|consen  884 EISTLTNLELVSISSP-AEEDAQGCALSVASSDCQVYLPLKGLVDPDSEIQKLAKKLEKLQKQLDKLQARISSSDYQEKA  962 (995)
T ss_pred             HHHHhhccceeEeccC-CccccCcceEeccCCceEEEEEeccCcCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccC
Confidence            9999999999999988 555679999999999999999999  9999999999999999999999999999999999999


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001303         1072 PSRIQEDNAAKLAKLLQEIDFFENESNRLGNS 1103 (1104)
Q Consensus      1072 P~~v~e~~~~Kl~~~~~el~~i~~~l~~l~~~ 1103 (1104)
                      |.++++.+++|++++++|++.++++++.++.+
T Consensus       963 p~~v~~~~~~Kl~~~~~ei~~~~~~~~~l~~~  994 (995)
T KOG0432|consen  963 PLEVKEKNKEKLKELEAEIENLKAALANLKSL  994 (995)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence            99999999999999999999999999998764

>PLN02381 valyl-tRNA synthetase	Back alignment and domain information

>COG0525 ValS Valyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PTZ00419 valyl-tRNA synthetase-like protein; Provisional	Back alignment and domain information

>PRK05729 valS valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PLN02943 aminoacyl-tRNA ligase	Back alignment and domain information

>PRK14900 valS valyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR00422 valS valyl-tRNA synthetase	Back alignment and domain information

>PTZ00427 isoleucine-tRNA ligase, putative; Provisional	Back alignment and domain information

>PRK06039 ileS isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PLN02882 aminoacyl-tRNA ligase	Back alignment and domain information

>PRK05743 ileS isoleucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK13804 ileS isoleucyl-tRNA synthetase; Provisional	Back alignment and domain information

>PLN02843 isoleucyl-tRNA synthetase	Back alignment and domain information

>PRK13208 valS valyl-tRNA synthetase; Reviewed	Back alignment and domain information

>COG0060 IleS Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>TIGR00392 ileS isoleucyl-tRNA synthetase	Back alignment and domain information

>PLN02959 aminoacyl-tRNA ligase	Back alignment and domain information

>TIGR00395 leuS_arch leucyl-tRNA synthetase, archaeal and cytosolic family	Back alignment and domain information

>PF00133 tRNA-synt_1: tRNA synthetases class I (I, L, M and V); InterPro: IPR002300 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>PRK12300 leuS leucyl-tRNA synthetase; Reviewed	Back alignment and domain information

>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family	Back alignment and domain information

>PRK00390 leuS leucyl-tRNA synthetase; Validated	Back alignment and domain information

>PLN02563 aminoacyl-tRNA ligase	Back alignment and domain information

>KOG0433 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG0434 consensus Isoleucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK12268 methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>TIGR00398 metG methionyl-tRNA synthetase	Back alignment and domain information

>cd00817 ValRS_core catalytic core domain of valyl-tRNA synthetases	Back alignment and domain information

>PRK00133 metG methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK12267 methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PLN02610 probable methionyl-tRNA synthetase	Back alignment and domain information

>KOG0437 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK11893 methionyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PLN02224 methionine-tRNA ligase	Back alignment and domain information

>COG0143 MetG Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>cd00818 IleRS_core catalytic core domain of isoleucyl-tRNA synthetases	Back alignment and domain information

>cd00668 Ile_Leu_Val_MetRS_core catalytic core domain of isoleucyl, leucyl, valyl and methioninyl tRNA synthetases	Back alignment and domain information

>KOG0436 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PF09334 tRNA-synt_1g: tRNA synthetases class I (M); InterPro: IPR015413 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>cd00814 MetRS_core catalytic core domain of methioninyl-tRNA synthetases	Back alignment and domain information

>cd00812 LeuRS_core catalytic core domain of leucyl-tRNA synthetases	Back alignment and domain information

>KOG1247 consensus Methionyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK00260 cysS cysteinyl-tRNA synthetase; Validated	Back alignment and domain information

>PTZ00399 cysteinyl-tRNA-synthetase; Provisional	Back alignment and domain information

>TIGR00435 cysS cysteinyl-tRNA synthetase	Back alignment and domain information

>PRK12418 cysteinyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR03447 mycothiol_MshC cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase	Back alignment and domain information

>PRK14536 cysS cysteinyl-tRNA synthetase; Provisional	Back alignment and domain information

>PLN02946 cysteine-tRNA ligase	Back alignment and domain information

>PRK14535 cysS cysteinyl-tRNA synthetase; Provisional	Back alignment and domain information

>cd00672 CysRS_core catalytic core domain of cysteinyl tRNA synthetase	Back alignment and domain information

>PRK01611 argS arginyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK14534 cysS cysteinyl-tRNA synthetase; Provisional	Back alignment and domain information

>cd00674 LysRS_core_class_I catalytic core domain of class I lysyl tRNA synthetase	Back alignment and domain information

>cd07961 Anticodon_Ia_Ile_ABEc Anticodon-binding domain of archaeal, bacterial, and eukaryotic cytoplasmic isoleucyl tRNA synthetases	Back alignment and domain information

>cd07960 Anticodon_Ia_Ile_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial isoleucyl tRNA synthetases	Back alignment and domain information

>COG0215 CysS Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK00750 lysK lysyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PF01406 tRNA-synt_1e: tRNA synthetases class I (C) catalytic domain; InterPro: IPR015803 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>PF08264 Anticodon_1: Anticodon-binding domain of tRNA; InterPro: IPR013155 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>PF13603 tRNA-synt_1_2: Leucyl-tRNA synthetase, Domain 2; PDB: 2AJH_B 4ARI_A 2AJG_B 4AQ7_D 2AJI_B 4ARC_A 4AS1_A 2BTE_A 2V0G_A 2BYT_A	Back alignment and domain information

>TIGR00456 argS arginyl-tRNA synthetase	Back alignment and domain information

>KOG2007 consensus Cysteinyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>COG0018 ArgS Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>TIGR00467 lysS_arch lysyl-tRNA synthetase, archaeal and spirochete	Back alignment and domain information

>PRK12451 arginyl-tRNA synthetase; Reviewed	Back alignment and domain information

>cd07962 Anticodon_Ia_Val Anticodon-binding domain of valyl tRNA synthetases	Back alignment and domain information

>PLN02286 arginine-tRNA ligase	Back alignment and domain information

>cd00671 ArgRS_core catalytic core domain of arginyl-tRNA synthetases	Back alignment and domain information

>cd07959 Anticodon_Ia_Leu_AEc Anticodon-binding domain of archaeal and eukaryotic cytoplasmic leucyl tRNA synthetases	Back alignment and domain information

>cd07958 Anticodon_Ia_Leu_BEm Anticodon-binding domain of bacterial and eukaryotic mitochondrial leucyl tRNA synthetases	Back alignment and domain information

>cd07957 Anticodon_Ia_Met Anticodon-binding domain of methionyl tRNA synthetases	Back alignment and domain information

>PF10458 Val_tRNA-synt_C: Valyl tRNA synthetase tRNA binding arm; InterPro: IPR019499 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>PF00750 tRNA-synt_1d: tRNA synthetases class I (R); InterPro: IPR015945 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>cd07375 Anticodon_Ia_like Anticodon-binding domain of class Ia aminoacyl tRNA synthetases and similar domains	Back alignment and domain information

>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase	Back alignment and domain information

>PF01921 tRNA-synt_1f: tRNA synthetases class I (K); InterPro: IPR002904 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>PRK04156 gltX glutamyl-tRNA synthetase; Provisional	Back alignment and domain information

>COG1384 LysS Lysyl-tRNA synthetase (class I) [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK01406 gltX glutamyl-tRNA synthetase; Reviewed	Back alignment and domain information

>cd09287 GluRS_non_core catalytic core domain of non-discriminating glutamyl-tRNA synthetase	Back alignment and domain information

>TIGR03838 queuosine_YadB glutamyl-queuosine tRNA(Asp) synthetase	Back alignment and domain information

>PLN03233 putative glutamate-tRNA ligase; Provisional	Back alignment and domain information

>PTZ00437 glutaminyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR00463 gltX_arch glutamyl-tRNA synthetase, archaeal and eukaryotic family	Back alignment and domain information

>PF00749 tRNA-synt_1c: tRNA synthetases class I (E and Q), catalytic domain; InterPro: IPR020058 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>PLN02907 glutamate-tRNA ligase	Back alignment and domain information

>PTZ00402 glutamyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR00440 glnS glutaminyl-tRNA synthetase	Back alignment and domain information

>cd00807 GlnRS_core catalytic core domain of glutaminyl-tRNA synthetase	Back alignment and domain information

>PRK05347 glutaminyl-tRNA synthetase; Provisional	Back alignment and domain information

>PRK14895 gltX glutamyl-tRNA synthetase; Provisional	Back alignment and domain information

>PLN02859 glutamine-tRNA ligase	Back alignment and domain information

>PRK05710 glutamyl-Q tRNA(Asp) synthetase; Reviewed	Back alignment and domain information

>PRK12410 glutamylglutaminyl-tRNA synthetase; Provisional	Back alignment and domain information

>PRK12558 glutamyl-tRNA synthetase; Provisional	Back alignment and domain information

>KOG4426 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>COG0008 GlnS Glutamyl- and glutaminyl-tRNA synthetases [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family	Back alignment and domain information

>PRK14703 glutaminyl-tRNA synthetase/YqeY domain fusion protein; Provisional	Back alignment and domain information

>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase	Back alignment and domain information

>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase	Back alignment and domain information

>PLN02627 glutamyl-tRNA synthetase	Back alignment and domain information

>cd07956 Anticodon_Ia_Arg Anticodon-binding domain of arginyl tRNA synthetases	Back alignment and domain information

>KOG1147 consensus Glutamyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>cd00395 Tyr_Trp_RS_core catalytic core domain of tyrosinyl-tRNA and tryptophanyl-tRNA synthetase	Back alignment and domain information

>PRK13354 tyrosyl-tRNA synthetase; Provisional	Back alignment and domain information

>cd00805 TyrRS_core catalytic core domain of tyrosinyl-tRNA synthetase	Back alignment and domain information

>PRK05912 tyrosyl-tRNA synthetase; Validated	Back alignment and domain information

>PF00579 tRNA-synt_1b: tRNA synthetases class I (W and Y); InterPro: IPR002305 The aminoacyl-tRNA synthetases (6	Back alignment and domain information

>KOG1195 consensus Arginyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK12556 tryptophanyl-tRNA synthetase; Provisional	Back alignment and domain information

>cd00802 class_I_aaRS_core catalytic core domain of class I amino acyl-tRNA synthetase	Back alignment and domain information

>cd00418 GlxRS_core catalytic core domain of glutamyl-tRNA and glutaminyl-tRNA synthetase	Back alignment and domain information

>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK12284 tryptophanyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PLN02563 aminoacyl-tRNA ligase	Back alignment and domain information

>KOG1148 consensus Glutaminyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK08560 tyrosyl-tRNA synthetase; Validated	Back alignment and domain information

>TIGR00233 trpS tryptophanyl-tRNA synthetase	Back alignment and domain information

>cd00808 GluRS_core catalytic core domain of discriminating glutamyl-tRNA synthetase	Back alignment and domain information

>TIGR00396 leuS_bact leucyl-tRNA synthetase, eubacterial and mitochondrial family	Back alignment and domain information

>COG0162 TyrS Tyrosyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK12285 tryptophanyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK12282 tryptophanyl-tRNA synthetase II; Reviewed	Back alignment and domain information

>COG0180 TrpS Tryptophanyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>PRK14900 valS valyl-tRNA synthetase; Provisional	Back alignment and domain information

>PTZ00126 tyrosyl-tRNA synthetase; Provisional	Back alignment and domain information

>TIGR00234 tyrS tyrosyl-tRNA synthetase	Back alignment and domain information

>PF15188 CCDC-167: Coiled-coil domain-containing protein 167	Back alignment and domain information

>cd00806 TrpRS_core catalytic core domain of tryptophanyl-tRNA synthetase	Back alignment and domain information

>PRK12283 tryptophanyl-tRNA synthetase; Reviewed	Back alignment and domain information

>PRK00390 leuS leucyl-tRNA synthetase; Validated	Back alignment and domain information

>PRK00927 tryptophanyl-tRNA synthetase; Reviewed	Back alignment and domain information

>KOG0435 consensus Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis]	Back alignment and domain information

>TIGR00464 gltX_bact glutamyl-tRNA synthetase, bacterial family	Back alignment and domain information

>PRK12285 tryptophanyl-tRNA synthetase; Reviewed	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		1104
1gax_A		862	Crystal Structure Of Thermus Thermophilus Valyl-Trn		1e-170
1jzq_A		821	Isoleucyl-Trna Synthetase Complexed With Isoleucyl-		2e-44
1qu2_A		917	Insights Into Editing From An Ile-Trna Synthetase S		3e-43
1wz2_A		967	The Crystal Structure Of Leucyl-Trna Synthetase And		8e-27
1wka_A		147	Structural Basis For Non-Cognate Amino Acid Discrim		1e-23
1wk9_A		146	Structural Basis For Non-Cognate Amino Acid Discrim		2e-23
1wkb_A		810	Crystal Structure Of Leucyl-Trna Synthetase From Th		4e-23
1obh_A		878	Leucyl-Trna Synthetase From Thermus Thermophilus Co		7e-22
2v0c_A		878	Leucyl-Trna Synthetase From Thermus Thermophilus Co		9e-22
4aq7_A		880	Ternary Complex Of E. Coli Leucyl-Trna Synthetase,		6e-18
3ziu_A		637	Crystal Structure Of Mycoplasma Mobile Leucyl-trna		8e-11
3ziu_A		637	Crystal Structure Of Mycoplasma Mobile Leucyl-trna		3e-05
4dlp_A		536	Crystal Structure Of Methionyl-Trna Synthetase Metr		4e-09
2csx_A		497	Crystal Structure Of Aquifex Aeolicus Methionyl-Trn		5e-06
2csx_A		497	Crystal Structure Of Aquifex Aeolicus Methionyl-Trn		2e-05
3o0a_A		219	Crystal Structure Of The Wild Type Cp1 Hydrolitic D		7e-06
3pz5_A		201	The Crystal Structure Of Aaleurs-Cp1-D20 Length = 2		1e-05
3pz0_A		221	The Crystal Structure Of Aaleurs-Cp1 Length = 221		1e-05
2x1l_A		524	Crystal Structure Of Mycobacterium Smegmatis Methio		1e-04
2d54_A		502	Crystal Structure Of Methionyl Trna Synthetase Y225		2e-04
1a8h_A		500	Methionyl-Trna Synthetase From Thermus Thermophilus		3e-04
1woy_A		500	Crystal Structure Of Methionyl Trna Synthetase Y225		3e-04
1woy_A		500	Crystal Structure Of Methionyl Trna Synthetase Y225		3e-04

>pdb|1GAX|A Chain A, Crystal Structure Of Thermus Thermophilus Valyl-Trna Synthetase Complexed With Trna(Val) And Valyl-Adenylate Analogue Length = 862