Citrus Sinensis ID: 001304
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1104 | 2.2.26 [Sep-21-2011] | |||||||
| P98205 | 1107 | Phospholipid-transporting | yes | no | 1.0 | 0.997 | 0.873 | 0.0 | |
| P70704 | 1149 | Probable phospholipid-tra | yes | no | 0.914 | 0.879 | 0.366 | 0.0 | |
| Q29449 | 1149 | Probable phospholipid-tra | yes | no | 0.913 | 0.878 | 0.365 | 1e-179 | |
| Q9Y2Q0 | 1164 | Probable phospholipid-tra | yes | no | 0.914 | 0.867 | 0.360 | 1e-179 | |
| P98200 | 1148 | Probable phospholipid-tra | no | no | 0.911 | 0.876 | 0.353 | 1e-174 | |
| Q9NTI2 | 1148 | Probable phospholipid-tra | no | no | 0.912 | 0.877 | 0.353 | 1e-172 | |
| O94296 | 1258 | Probable phospholipid-tra | yes | no | 0.913 | 0.802 | 0.355 | 1e-170 | |
| P98198 | 1209 | Probable phospholipid-tra | no | no | 0.898 | 0.820 | 0.336 | 1e-169 | |
| P39524 | 1355 | Probable phospholipid-tra | yes | no | 0.913 | 0.744 | 0.346 | 1e-168 | |
| P98199 | 1209 | Probable phospholipid-tra | no | no | 0.902 | 0.823 | 0.334 | 1e-168 |
| >sp|P98205|ALA2_ARATH Phospholipid-transporting ATPase 2 OS=Arabidopsis thaliana GN=ALA2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 2017 bits (5225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 967/1107 (87%), Positives = 1039/1107 (93%), Gaps = 3/1107 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 661 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 960
HAI+ FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ETNSFTV QHL+IWGNLV
Sbjct: 901 HAIIVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETNSFTVLQHLSIWGNLVG 960
Query: 961 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1020
FY IN++FSAIPSSGMYTIMFRLCSQPSYWITMFLIV AGMGPI ALKYFRYTYR SKIN
Sbjct: 961 FYAINFLFSAIPSSGMYTIMFRLCSQPSYWITMFLIVGAGMGPIFALKYFRYTYRPSKIN 1020
Query: 1021 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1079
ILQQAERMGGPIL+LG IE QPR IEKD++P+SITQP++RSPVYEPLLSDSPN TRRSFG
Sbjct: 1021 ILQQAERMGGPILTLGNIETQPRTIEKDLSPISITQPKNRSPVYEPLLSDSPNATRRSFG 1080
Query: 1080 SGTPFDFFQSPSRLSSI--YSRNCKDN 1104
GTPF+FFQS SRLSS Y+RNCKDN
Sbjct: 1081 PGTPFEFFQSQSRLSSSSGYTRNCKDN 1107
|
Involved in transport of phospholipids. Contributes to transmembrane flipping of lipids. Requires an interaction with a protein of the ALIS family for activity. Specific for phosphatidylserine and has no activity with lysolipid, phosphatidylcholine or phosphatidylethanolamine. Arabidopsis thaliana (taxid: 3702) EC: 3EC: .EC: 6EC: .EC: 3EC: .EC: 1 |
| >sp|P70704|AT8A1_MOUSE Probable phospholipid-transporting ATPase IA OS=Mus musculus GN=Atp8a1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 636 bits (1640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/1051 (36%), Positives = 596/1051 (56%), Gaps = 41/1051 (3%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +F I + +V +W + K WY
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWY- 329
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L+ + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT +
Sbjct: 330 LHLHYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAA 389
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGLL 417
A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG + GD D LL
Sbjct: 390 MARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQSSQFGDEKTFNDPSLL 449
Query: 418 NAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474
+ + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 450 DNLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVFT 508
Query: 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-Y 533
+ + I G +YE+L LEFTS RKRMSVVV+ SG + L KGAD I
Sbjct: 509 GRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVVVR-TPSGKLRLYCKGADTVIYERL 567
Query: 534 AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 593
A + ++ +EQ++ GLRTLC A E+ E +++EW ++ AS+++ +R ++ E
Sbjct: 568 AETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFEEWRAVYHRASTSVQNRLLKLEE 627
Query: 594 VCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653
+ +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC +
Sbjct: 628 SYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCRLL 687
Query: 654 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKA 712
+ ++ I+ + D +L R T+ + D A ++DG L+ AL R+
Sbjct: 688 --KRNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQY 745
Query: 713 FTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISG 771
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGISG
Sbjct: 746 FLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGISG 805
Query: 772 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831
EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I+F+F++
Sbjct: 806 NEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYKNIVLYIIEIWFAFVN 865
Query: 832 GLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPST 890
G SG LF + YNV +T++P L I ++ + ++++P++ Q N
Sbjct: 866 GFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPELYKTSQNALDFNTKV 925
Query: 891 FAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVV-------ALET 943
F LFH+++ F + Y + L ++ FVV LET
Sbjct: 926 FWVHCLNGLFHSVILFWFPLKALQYGTVFGNGKTSDYLLLGNFVYTFVVITVCLKAGLET 985
Query: 944 NSFTVFQHLAIWGNL----VAFYIINWIFSAIP----SSGMYTIMFRLCSQPSYWITMFL 995
+ +T F H+AIWG++ V F I + ++ A+P SG ++F S +W+ +
Sbjct: 986 SYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMAPDMSGEAAMLF---SSGVFWVGLLS 1042
Query: 996 IVAAGMGPIVALKYFRYTYRASKINILQQAE 1026
I A + V K + T + ++ +Q+ E
Sbjct: 1043 IPVASLLLDVLYKVIKRTAFKTLVDEVQELE 1073
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q29449|AT8A1_BOVIN Probable phospholipid-transporting ATPase IA OS=Bos taurus GN=ATP8A1 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 630 bits (1624), Expect = e-179, Method: Compositional matrix adjust.
Identities = 385/1052 (36%), Positives = 592/1052 (56%), Gaps = 43/1052 (4%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC P++ + F GN+RL PL +L+ LRNT+W G+ VYT
Sbjct: 215 LSGRIECESPNRHLYDFVGNIRL----DGRSTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +F I + +V +W + + WY
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGRDWY- 329
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT +
Sbjct: 330 LNLNYGGANNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAA 389
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGLL 417
A + ++ +L QV+YI +DKTGTLT N M F++C I G+ YG + GD D LL
Sbjct: 390 MARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEKTFSDSSLL 449
Query: 418 NAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474
+ + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 450 ENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVFT 508
Query: 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-Y 533
+ + I G +YE+L LEFTS RKRMSV+V+ SG + L KGAD I
Sbjct: 509 GRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVR-TPSGKLRLYCKGADTVIYDRL 567
Query: 534 AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 593
A + ++ +EQ++ GLRTLC A E+ E ++QEW ++ AS+++ +R ++ E
Sbjct: 568 AETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRASTSVQNRLLKLEE 627
Query: 594 VCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653
+ +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 628 SYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCKL- 686
Query: 654 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKA 712
++ I+ + D +L R T+ + D A ++DG L+ AL R+
Sbjct: 687 -RRKNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQY 745
Query: 713 FTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISG 771
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGISG
Sbjct: 746 FLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGISG 805
Query: 772 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831
EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK++++ I+I+F+F++
Sbjct: 806 NEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRGSKCILYCFYKNIVLYIIEIWFAFVN 865
Query: 832 GLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPST 890
G SG LF + YNV +T++P L I ++ + ++++P++ Q N
Sbjct: 866 GFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKEYMLKYPELYKTSQNALDFNTKV 925
Query: 891 FAGWFGRSLFHAIVAFVISIHVYAYEKS-EMEEVSMVALSGCIWLQAFVV-------ALE 942
F LFH+++ F + Y E S L G ++ FVV LE
Sbjct: 926 FWVHCLNGLFHSVILFWFPLKALQYGTVFENGRTSDYLLLGN-FVYTFVVITVCLKAGLE 984
Query: 943 TNSFTVFQHLAIWGNL----VAFYIINWIFSAIP----SSGMYTIMFRLCSQPSYWITMF 994
T+ +T F H+AIWG++ V F I + ++ A+P SG ++F S +W+ +
Sbjct: 985 TSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMAPDMSGEAAMLF---SSGVFWMGLL 1041
Query: 995 LIVAAGMGPIVALKYFRYTYRASKINILQQAE 1026
I A + V K + T + ++ +Q+ E
Sbjct: 1042 FIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1073
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Bos taurus (taxid: 9913) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9Y2Q0|AT8A1_HUMAN Probable phospholipid-transporting ATPase IA OS=Homo sapiens GN=ATP8A1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 629 bits (1622), Expect = e-179, Method: Compositional matrix adjust.
Identities = 384/1066 (36%), Positives = 595/1066 (55%), Gaps = 56/1066 (5%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVAVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
IV + + +P DL+ + +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 EIVKVTNGEHLPADLISLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDVDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +F I + +V +W + K WY
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWY- 329
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L + L F +L + +IPIS+ V+L++VK A FI+WD +M TDT +
Sbjct: 330 LNLNYGGASNFGLNFLTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTAA 389
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN---------------- 405
A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG+
Sbjct: 390 MARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGHVPEPEDYGCSPDEWQN 449
Query: 406 -ETGD--ALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
+ GD D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 450 SQFGDEKTFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 460 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 519
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVR-TPSGKL 567
Query: 520 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
KQ TAI I SC + + ++ I+ + D +L R T+ + D A ++D
Sbjct: 688 KQETAINIGHSCKLL--KKNMGMIVINEGSLDGTRETLSRHCTTLGDALRKENDFALIID 745
Query: 699 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGND 756
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGAND 805
Query: 757 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L+++HG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFYK 865
Query: 817 SLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQ 875
++++ I+I+F+F++G SG LF + YNV +T++P L I ++ + ++++P+
Sbjct: 866 NIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPE 925
Query: 876 ILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQ 935
+ Q N F LFH+++ F + Y + + L ++
Sbjct: 926 LYKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTAFGNGKTSDYLLLGNFVY 985
Query: 936 AFVV-------ALETNSFTVFQHLAIWGNL----VAFYIINWIFSAIP----SSGMYTIM 980
FVV LET+ +T F H+AIWG++ V F I + ++ AIP SG ++
Sbjct: 986 TFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAIPMAPDMSGEAAML 1045
Query: 981 FRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1026
F S +W+ + I A + V K + T + ++ +Q+ E
Sbjct: 1046 F---SSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1088
|
May play a role in the transport of aminophospholipids from the outer to the inner leaflet of various membranes and the maintenance of asymmetric distribution of phospholipids, mainly in secretory vesicles. Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98200|AT8A2_MOUSE Probable phospholipid-transporting ATPase IB OS=Mus musculus GN=Atp8a2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 612 bits (1579), Expect = e-174, Method: Compositional matrix adjust.
Identities = 379/1071 (35%), Positives = 589/1071 (54%), Gaps = 65/1071 (6%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY+N ++ +C NR+S KY+++ FLP+ L+EQ R N +FL IA LQ ++
Sbjct: 16 RIIYLNQSHLNK--FCDNRISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVS 73
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+ I ++ KE +D+ R+ +D N+K+ V++ G+ I +++ VG
Sbjct: 74 PTGRYTTLVPLVIILTIAGIKEIIEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVG 133
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDF-ELLHK 181
+IV + +P D+VL +S+PQG+CYVETA LDGET+LK R + M ++L K
Sbjct: 134 DIVKVLNGQYLPADMVLFSSSEPQGMCYVETANLDGETNLKIRQGLSHTTDMQTRDVLMK 193
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC GP++ + F GNL L L +L+ LRNT+W GV VYT
Sbjct: 194 LSGRIECEGPNRHLYDFTGNLHL----DGKSSVALGPDQILLRGTQLRNTQWVFGVVVYT 249
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G+++KL K + V+ + + +F +V+ +V W + K WY+
Sbjct: 250 GHDSKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSVGALFWNGSHGGKSWYI 309
Query: 302 ----LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
F Y LL F +L + +IPIS+ V+L++VK A FI+WD +M E
Sbjct: 310 KKMDTNSDNFG-YNLLT----FIILYNNLIPISLLVTLEVVKYTQALFINWDMDMYYIEN 364
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG------------- 404
DTP+ A + ++E+L QV+Y+ +DKTGTLT N M F++C I G+ YG
Sbjct: 365 DTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREQSSDD 424
Query: 405 --------NETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYK 453
N++ D D LL I P + FLT++AVC+TV+P K I+Y+
Sbjct: 425 FCRMTSCTNDSCD-FNDPRLLKNIEDQHPTAPCIQEFLTLLAVCHTVVPEKD-GDEIIYQ 482
Query: 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD 513
A S DE ALV A +L V + + I+ G + IL LEF+SDRKRMSV+V+
Sbjct: 483 ASSPDEAALVKGAKKLGFVFTGRTPYSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVR- 541
Query: 514 CHSGNISLLSKGADEAILPYAHAGQQTRTFVEA---VEQYSQLGLRTLCLAWREVEEDEY 570
SG + L KGAD I + + ++ E +E ++ GLRTLC+A+ ++ E+EY
Sbjct: 542 LPSGQLRLYCKGADNVI--FERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEY 599
Query: 571 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 630
+EW +++EAS L DR R+ E + +E +L +LG TAIEDRLQ GVPETI TL KA I
Sbjct: 600 EEWLKVYQEASIILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEI 659
Query: 631 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690
W+LTGDKQ TAI I SC +S LL D + D ++ + + +
Sbjct: 660 KIWVLTGDKQETAINIGYSCRLVSQNMALILLKED--SLDATRAAITQHCTDLGNLLGKE 717
Query: 691 KDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTL 748
DVA ++DG L+ AL R++F +LA+ + ICCRV+P QK+++V+++K TL
Sbjct: 718 NDVALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITL 777
Query: 749 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAF 808
AIGDG NDV MIQ A +GVGISG EG+QA +DY+I +F +L++L+LVHG +SYNR
Sbjct: 778 AIGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTK 837
Query: 809 LSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSE 867
Y FYK++++ I+++F+F++G SG LF + YNV +T++P I ++ ++
Sbjct: 838 CILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQ 897
Query: 868 GTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE-------KSEM 920
++++ PQ+ Q N F G +L H+++ F + + ++ ++
Sbjct: 898 ESMLRFPQLYRITQNAEGFNTKVFWGHCINALVHSLILFWVPMKALEHDTPVTSGHATDY 957
Query: 921 EEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGN----LVAFYIINWIFSAIP-SSG 975
V + + + LET ++T F HLA+WG+ LV F + + I+ IP +
Sbjct: 958 LFVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLIWLVFFGVYSTIWPTIPIAPD 1017
Query: 976 MYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1026
M + S +W+ +FL+ A + VA + ++T + + + +Q+ E
Sbjct: 1018 MKGQATMVLSSAYFWLGLFLVPTACLIEDVAWRAAKHTCKKTLLEEVQELE 1068
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|Q9NTI2|AT8A2_HUMAN Probable phospholipid-transporting ATPase IB OS=Homo sapiens GN=ATP8A2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 605 bits (1559), Expect = e-172, Method: Compositional matrix adjust.
Identities = 378/1070 (35%), Positives = 589/1070 (55%), Gaps = 63/1070 (5%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY+N ++ + N++S KY+++ FLP+ L+EQ R N +FL IA LQ ++
Sbjct: 16 RTIYLNQPHLNK--FRDNQISTAKYSVLTFLPRFLYEQIRRAANAFFLFIALLQQIPDVS 73
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PLI I ++ KE +D+ R+ +D N+K+ V++ G+ I +++ VG
Sbjct: 74 PTGRYTTLVPLIIILTIAGIKEIVEDFKRHKADNAVNKKKTIVLRNGMWHTIMWKEVAVG 133
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDF-ELLHK 181
+IV + +P D+VL+ +S+PQ +CYVETA LDGET+LK R + M E+L K
Sbjct: 134 DIVKVVNGQYLPADVVLLSSSEPQAMCYVETANLDGETNLKIRQGLSHTADMQTREVLMK 193
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC GP++ + F GNL L + L +L+ LRNT+W G+ VYT
Sbjct: 194 LSGTIECEGPNRHLYDFTGNLNL----DGKSLVALGPDQILLRGTQLRNTQWVFGIVVYT 249
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
G++TKL K + V+ + + +F +V+ +V W + K WY+
Sbjct: 250 GHDTKLMQNSTKAPLKRSNVEKVTNVQILVLFGILLVMALVSSAGALYWNRSHGEKNWYI 309
Query: 302 ----LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
F Y LL F +L + +IPIS+ V+L++VK A FI+WD +M
Sbjct: 310 KKMDTTSDNFG-YNLLT----FIILYNNLIPISLLVTLEVVKYTQALFINWDTDMYYIGN 364
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN--------ETGD 409
DTP+ A + ++E+L QV+Y+ +DKTGTLT N M F++C I G+ YG+ + D
Sbjct: 365 DTPAMARTSNLNEELGQVKYLFSDKTGTLTCNIMNFKKCSIAGVTYGHFPELAREPSSDD 424
Query: 410 ALK------------DVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKA 454
+ D LL I P + FLT++AVC+TV+P K I+Y+A
Sbjct: 425 FCRMPPPCSDSCDFDDPRLLKNIEDRHPTAPCIQEFLTLLAVCHTVVPEKD-GDNIIYQA 483
Query: 455 QSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC 514
S DE ALV A +L V + + I+ G + IL LEF+SDRKRMSV+V+
Sbjct: 484 SSPDEAALVKGAKKLGFVFTARTPFSVIIEAMGQEQTFGILNVLEFSSDRKRMSVIVR-T 542
Query: 515 HSGNISLLSKGADEAILPYAHAGQQTRTFVEA---VEQYSQLGLRTLCLAWREVEEDEYQ 571
SG + L KGAD I + + ++ E +E ++ GLRTLC+A+ ++ E+EY+
Sbjct: 543 PSGRLRLYCKGADNVI--FERLSKDSKYMEETLCHLEYFATEGLRTLCVAYADLSENEYE 600
Query: 572 EWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 631
EW +++EAS+ L DR R+ E + +E +L +LG TAIEDRLQ GVPETI TL KA I
Sbjct: 601 EWLKVYQEASTILKDRAQRLEECYEIIEKNLLLLGATAIEDRLQAGVPETIATLLKAEIK 660
Query: 632 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691
W+LTGDKQ TAI I SC +S LL D + D ++ + + +
Sbjct: 661 IWVLTGDKQETAINIGYSCRLVSQNMALILLKED--SLDATRAAITQHCTDLGNLLGKEN 718
Query: 692 DVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLA 749
DVA ++DG L+ AL R++F +LA+ + ICCRV+P QK+++V+++K TLA
Sbjct: 719 DVALIIDGHTLKYALSFEVRRSFLDLALSCKAVICCRVSPLQKSEIVDVVKKRVKAITLA 778
Query: 750 IGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFL 809
IGDG NDV MIQ A +GVGISG EG+QA +DY+I +F +L++L+LVHG +SYNR
Sbjct: 779 IGDGANDVGMIQTAHVGVGISGNEGMQATNNSDYAIAQFSYLEKLLLVHGAWSYNRVTKC 838
Query: 810 SQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI-DKDLSEG 868
Y FYK++++ I+++F+F++G SG LF + YNV +T++P I ++ ++
Sbjct: 839 ILYCFYKNVVLYIIELWFAFVNGFSGQILFERWCIGLYNVIFTALPPFTLGIFERSCTQE 898
Query: 869 TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE-------KSEME 921
++++ PQ+ Q G N F G +L H+++ F + ++ ++
Sbjct: 899 SMLRFPQLYKITQNGEGFNTKVFWGHCINALVHSLILFWFPMKALEHDTVLTSGHATDYL 958
Query: 922 EVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGN----LVAFYIINWIFSAIP-SSGM 976
V + + + LET ++T F HLA+WG+ LV F I + I+ IP + M
Sbjct: 959 FVGNIVYTYVVVTVCLKAGLETTAWTKFSHLAVWGSMLTWLVFFGIYSTIWPTIPIAPDM 1018
Query: 977 YTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1026
+ S +W+ +FL+ A + VA + ++T + + + +Q+ E
Sbjct: 1019 RGQATMVLSSAHFWLGLFLVPTACLIEDVAWRAAKHTCKKTLLEEVQELE 1068
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|O94296|YOOC_SCHPO Probable phospholipid-transporting ATPase C887.12 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.12 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 598 bits (1542), Expect = e-170, Method: Compositional matrix adjust.
Identities = 380/1069 (35%), Positives = 596/1069 (55%), Gaps = 60/1069 (5%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I +ND S + + N +S KY+ FLPK L EQFS++ N +FL A +Q IT
Sbjct: 145 RQIILND--YSANHFLHNAVSTCKYSAFTFLPKFLKEQFSKYANLFFLFTAVVQQIPGIT 202
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
PVN +T GP++ + +VS KE +D R D++ NE +V++ Q +D+ VG
Sbjct: 203 PVNRYTTIGPMLIVLSVSGIKEIMEDIKRKKQDQELNESPCYVLQGTGFVEKQWKDVVVG 262
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELLHK 181
+IV + P DLVL+ +S+P+G+CY+ETA LDGET+LK + +P + L +
Sbjct: 263 DIVKIVSETFFPADLVLLSSSEPEGLCYIETANLDGETNLKIKQALPETAGLLKPVELGQ 322
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G ++ P+ ++ FD L+LLP D ++ PL+ +L+ LRNT W G+ V+T
Sbjct: 323 LSGEVKSEQPNNNLYTFDATLKLLPS--DREL-PLSPDQLLLRGAQLRNTPWVYGIVVFT 379
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTA--GNVWKDTEARKQW 299
G+E+KL K T+V+ ++ + +F+ I V + ++ + +
Sbjct: 380 GHESKLMKNTTETPIKRTSVEKQVN--SQILFLLCIFVFLCFASSLGALIHRSVYGSALS 437
Query: 300 YVLYPQEFP--WYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
YV Y +++ L L F +L S ++PIS+ V+ +LV+ + A+ I D +M + ET
Sbjct: 438 YVKYTSNRAGMFFKGL---LTFWILYSNLVPISLFVTFELVRYIQAQLISSDLDMYNEET 494
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN----------ET 407
DTP+ +++ E+L QV YI +DKTGTLT N+M FR+C I G+ Y + E
Sbjct: 495 DTPAACRTSSLVEELGQVGYIFSDKTGTLTRNQMEFRQCTIAGVAYADVIPEDRQFTSED 554
Query: 408 GDA---LKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKA-GAILYKAQSQDEE 460
D+ + D L S + + +FL V+++C+TVIP ++ +I Y+A S DE
Sbjct: 555 LDSDMYIYDFDTLKENLKHSENASLIHQFLLVLSICHTVIPEYDESTNSIKYQASSPDEG 614
Query: 461 ALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNIS 520
ALV AA + + + ++ + G YE+L EF S RKRMS+V + C G I
Sbjct: 615 ALVKGAASIGYKFLARKPHLVTVSIFGKDESYELLHICEFNSTRKRMSIVFR-CPDGKIR 673
Query: 521 LLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKE 579
L KGAD I+ A +T + +E Y+ +GLRTLC+A REV EDEYQ WS +F+
Sbjct: 674 LYVKGADTVIMERLASDNPYLQTTIHHLEDYATVGLRTLCIAMREVPEDEYQRWSTVFET 733
Query: 580 ASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDK 639
A+S+L+DR ++ + + +E DL +LG TAIEDRLQDGVP+TI TL+ AGI W+LTGD+
Sbjct: 734 AASSLVDRAQKLMDAAEEIEKDLILLGATAIEDRLQDGVPDTISTLQTAGIKIWVLTGDR 793
Query: 640 QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM---RITTSEPKDVAFV 696
Q TAI I +SC I E G L+ ++ +T++ S+ L ++ TT + +A V
Sbjct: 794 QETAINIGMSCKLID-EDMG-LVIVNEETKEATAESVMAKLSSIYRNEATTGNVESMALV 851
Query: 697 VDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGG 754
+DG +L AL + F ELA L R ICCRV+P QKA +V+++K + LAIGDG
Sbjct: 852 IDGVSLTYALDFSLERRFFELASLCRAVICCRVSPLQKALIVKMVKRNTGEVLLAIGDGA 911
Query: 755 NDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSF 814
NDV MIQ A +GVGISG EGLQA R++D+SI +F +LK+L+LVHG + Y R + L YSF
Sbjct: 912 NDVPMIQAAHVGVGISGMEGLQAVRSSDFSISQFCYLKKLLLVHGSWCYQRLSKLILYSF 971
Query: 815 YKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSI-PVLVSTIDKDLSEGTVMQH 873
YK++ + Q +++F + SG +F S S+ YNV +T + PV++ D+ +S G + Q+
Sbjct: 972 YKNIALYMTQFWYAFCNAFSGQVIFESWSISLYNVLFTVLPPVVIGIFDQFVSAGQLFQY 1031
Query: 874 PQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIW 933
PQ+ Q N F W +H+++ F+ SI V+ Y+ + +A +W
Sbjct: 1032 PQLYQLGQRSEFFNLKRFWSWITNGFYHSLLLFLCSIAVFYYDGPNKDG---LASGHWVW 1088
Query: 934 ---LQAFVV-------ALETNSFTVFQHLAIWGNLVAFYIINWIFS-AIPSSGM----YT 978
L A ++ AL +N +T + +A G+ + + + I++ A P+ G Y
Sbjct: 1089 GTTLYAAILATVLGKAALISNHWTQYTVIATLGSFLLWIVFMPIYAVAAPAIGFSKEYYG 1148
Query: 979 IMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAER 1027
I+ L +W ++ ++ + KY Y + + +Q+ ++
Sbjct: 1149 IIPHLYGNLKFWASLLVLPTIALMRDFVWKYSSRMYYPEEYHYVQEIQK 1197
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids. Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98198|AT8B2_HUMAN Probable phospholipid-transporting ATPase ID OS=Homo sapiens GN=ATP8B2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 596 bits (1536), Expect = e-169, Method: Compositional matrix adjust.
Identities = 368/1094 (33%), Positives = 591/1094 (54%), Gaps = 102/1094 (9%)
Query: 2 KRYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
+R ND E ++ Y +N + KY ++ FLP NL+EQF N YFL + LQL
Sbjct: 32 ERRARANDREYNEKFQYASNCIKTSKYNILTFLPVNLFEQFQEVANTYFLFLLILQLIPQ 91
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
I+ ++ +T PL+ + ++A K+A DDY R+ SD + N ++ V+ GI + Q ++
Sbjct: 92 ISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRQSQVLINGILQQEQWMNVC 151
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELL 179
VG+I+ L N V DL+L+ +S+P G+CY+ETA LDGET++K R IP D L
Sbjct: 152 VGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTSELGDISKL 211
Query: 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239
K G + C P+ + +F G L + + PL+ +N +L+ C LRNTEW G+ +
Sbjct: 212 AKFDGEVICEPPNNKLDKFSGTL-----YWKENKFPLSNQNMLLRGCVLRNTEWCFGLVI 266
Query: 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWK-DTEARKQ 298
+ G +TKL G + K T++D +++ L IF F + + ++L +W+ + R Q
Sbjct: 267 FAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGMRFQ 326
Query: 299 WYVLYPQEFPWYELLVIPL--------RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDY 350
Y+ PW E + + ++ + ++PIS+ VS+++++ ++ FI+WD
Sbjct: 327 VYL------PWDEAVDSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDK 380
Query: 351 EMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN----- 405
+M + TP+ A T ++E+L QVEYI +DKTGTLT+N M+F +C I G YG+
Sbjct: 381 KMFCMKKRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFNKCSINGHSYGDVFDVL 440
Query: 406 ----ETGDALK-----------------DVGLLNAITSGSPDVIRFLTVMAVCNTVIPAK 444
E G+ + D LL A+ G P F ++++C+TV+ +
Sbjct: 441 GHKAELGERPEPVDFSFNPLADKKFLFWDPSLLEAVKIGDPHTHEFFRLLSLCHTVMSEE 500
Query: 445 SKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDR 504
G + YKAQS DE ALV AA V ++ + + G+ + Y++L L+F + R
Sbjct: 501 KNEGELYYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHEMGTAITYQLLAILDFNNIR 560
Query: 505 KRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT--RTFVEAVEQYSQLGLRTLCLAW 562
KRMSV+V++ G I L KGAD +L H Q T ++ + +Y+ GLRTL LA+
Sbjct: 561 KRMSVIVRN-PEGKIRLYCKGADTILLDRLHHSTQELLNTTMDHLNEYAGEGLRTLVLAY 619
Query: 563 REVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETI 622
++++E+ Y+EW+ +AS RE R+A + + +E+++ +LG TAIED+LQ GVPETI
Sbjct: 620 KDLDEEYYEEWAERRLQASLAQDSREDRLASIYEEVENNMMLLGATAIEDKLQQGVPETI 679
Query: 623 ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 682
L A I W+LTGDKQ TA+ I SC ++ + ++ + G T EV L +
Sbjct: 680 ALLTLANIKIWVLTGDKQETAVNIGYSCKMLT-DDMTEVFIVTGHTVLEVREELRKAREK 738
Query: 683 M---------------RITTSEPKDV--------AFVVDGWALEIALK-HYRKAFTELAI 718
M ++++S+ V A V++G +L AL+ F E A
Sbjct: 739 MMDSSRSVGNGFTYQDKLSSSKLTSVLEAVAGEYALVINGHSLAHALEADMELEFLETAC 798
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYR---TLAIGDGGNDVRMIQKADIGVGISGREGL 775
+ ICCRVTP QKAQ+VEL+K Y+ TLAIGDG NDV MI+ A IGVGISG+EG+
Sbjct: 799 ACKAVICCRVTPLQKAQVVELVKK--YKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGI 856
Query: 776 QAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSG 835
QA A+DYS +F+FL+RL+LVHGR+SY R Y FYK+ + +F F G S
Sbjct: 857 QAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSA 916
Query: 836 TSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGW 894
++++ + YN+ YTS+PVL + D+D+ E M++P++ Q L N F
Sbjct: 917 QTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFIC 976
Query: 895 FGRSLFHAIVAFVISIHVYA-------YEKSEMEEVSMVALSGCIWLQAFVVALETNSFT 947
+ ++ +++ F I V+A + ++ + ++ + + + + + L+T +T
Sbjct: 977 IAQGIYTSVLMFFIPYGVFADATRDDGTQLADYQSFAVTVATSLVIVVSVQIGLDTGYWT 1036
Query: 948 VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIM---FRLC-------SQPSYWITMFLIV 997
H IWG+L ++ I A+ S+G++ + FR +QP+ W+T+ L
Sbjct: 1037 AINHFFIWGSLAVYFA---ILFAMHSNGLFDMFPNQFRFVGNAQNTLAQPTVWLTIVLTT 1093
Query: 998 AAGMGPIVALKYFR 1011
+ P+VA ++ R
Sbjct: 1094 VVCIMPVVAFRFLR 1107
|
Homo sapiens (taxid: 9606) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P39524|ATC3_YEAST Probable phospholipid-transporting ATPase DRS2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=DRS2 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 593 bits (1530), Expect = e-168, Method: Compositional matrix adjust.
Identities = 373/1077 (34%), Positives = 593/1077 (55%), Gaps = 68/1077 (6%)
Query: 3 RYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI 61
R I+IND + Y N +S KY FLPK L+++FS++ N +FL + +Q +
Sbjct: 183 RVIHINDSLANSSFGYSDNHISTTKYNFATFLPKFLFQEFSKYANLFFLCTSAIQQVPHV 242
Query: 62 TPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQ--DI 119
+P N +T G L+ + VSA KE +D R SDK+ N + + ++ + DI
Sbjct: 243 SPTNRYTTIGTLLVVLIVSAMKECIEDIKRANSDKELNNSTAEIFSEAHDDFVEKRWIDI 302
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMG-MDFEL 178
RVG+I+ ++ + +P D +++ +S+P+G+CY+ETA LDGET+LK + +D +
Sbjct: 303 RVGDIIRVKSEEPIPADTIILSSSEPEGLCYIETANLDGETNLKIKQSRVETAKFIDVKT 362
Query: 179 LHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238
L + G + P+ + ++G + L ++ PL+ IL+ LRNT W G+
Sbjct: 363 LKNMNGKVVSEQPNSSLYTYEGTMTL-----NDRQIPLSPDQMILRGATLRNTAWIFGLV 417
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQ 298
++TG+ETKL K TAV+ +I++ A+F ++V+I++ + GNV T K
Sbjct: 418 IFTGHETKLLRNATATPIKRTAVEKIINRQIIALFTV-LIVLILISSIGNVIMSTADAKH 476
Query: 299 WYVLYPQEFPWYELLVIP-LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
LY + L L F +L S ++PIS+ V+++L+K A I D ++ +T
Sbjct: 477 LSYLYLEGTNKAGLFFKDFLTFWILFSNLVPISLFVTVELIKYYQAFMIGSDLDLYYEKT 536
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY-------------- 403
DTP+ +++ E+L Q+EYI +DKTGTLT N M F+ C I G Y
Sbjct: 537 DTPTVVRTSSLVEELGQIEYIFSDKTGTLTRNIMEFKSCSIAGHCYIDKIPEDKTATVED 596
Query: 404 GNETG----DALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
G E G D LK L + SP + FLT++A C+TVIP G+I Y+A S DE
Sbjct: 597 GIEVGYRKFDDLKK-KLNDPSDEDSPIINDFLTLLATCHTVIPEFQSDGSIKYQAASPDE 655
Query: 460 EALVHAAAQL--HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 517
ALV A L ++ N+ + ++ G +Y++L EF S RKRMS + + G
Sbjct: 656 GALVQGGADLGYKFIIRKPNSVTVLLEETGEEKEYQLLNICEFNSTRKRMSAIFR-FPDG 714
Query: 518 NISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 575
+I L KGAD IL A Q + +E Y+ GLRTLCLA R++ E EY+EW+
Sbjct: 715 SIKLFCKGADTVILERLDDEANQYVEATMRHLEDYASEGLRTLCLAMRDISEGEYEEWNS 774
Query: 576 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635
++ EA++TL +R ++ E +E +L ++G TAIED+LQDGVPETI TL++AGI W+L
Sbjct: 775 IYNEAATTLDNRAEKLDEAANLIEKNLILIGATAIEDKLQDGVPETIHTLQEAGIKIWVL 834
Query: 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRS-LERV--LLTMRITTSEPKD 692
TGD+Q TAI I +SC +S + LL I+ +T D+ R+ LE++ L +++T +
Sbjct: 835 TGDRQETAINIGMSCRLLSEDM--NLLIINEETRDDTERNLLEKINALNEHQLSTHDMNT 892
Query: 693 VAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAI 750
+A V+DG +L AL+ +A L + ICCRV+P QKA +V+++K LAI
Sbjct: 893 LALVIDGKSLGFALEPELEDYLLTVAKLCKAVICCRVSPLQKALVVKMVKRKSSSLLLAI 952
Query: 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 810
GDG NDV MIQ A +GVGISG EG+QAAR+AD ++G+F+FLK+L+LVHG +SY R +
Sbjct: 953 GDGANDVSMIQAAHVGVGISGMEGMQAARSADIAVGQFKFLKKLLLVHGSWSYQRISVAI 1012
Query: 811 QYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTS-IPVLVSTIDKDLSEGT 869
YSFYK+ + Q ++ F + SG S+ S ++ YN+F+T P ++ D+ +S
Sbjct: 1013 LYSFYKNTALYMTQFWYVFANAFSGQSIMESWTMSFYNLFFTVWPPFVIGVFDQFVSSRL 1072
Query: 870 VMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY--------EKSEME 921
+ ++PQ+ Q G+ + F GW FH+ + F+ +I +Y Y E ++
Sbjct: 1073 LERYPQLYKLGQKGQFFSVYIFWGWIINGFFHSAIVFIGTILIYRYGFALNMHGELADHW 1132
Query: 922 EVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAI-PSSGM---- 976
+ + + + AL TN +T F +AI G+L+ + I I+++I P + +
Sbjct: 1133 SWGVTVYTTSVIIVLGKAALVTNQWTKFTLIAIPGSLLFWLIFFPIYASIFPHANISREY 1192
Query: 977 YTIMFRLCSQPSYWITMFLIVAAGMGPIVAL------KYFRYTYRASKINILQQAER 1027
Y ++ +W+T+ ++ PI AL KY++ Y +++Q+ ++
Sbjct: 1193 YGVVKHTYGSGVFWLTLIVL------PIFALVRDFLWKYYKRMYEPETYHVIQEMQK 1243
|
This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of phospholipids (Potential). Seems to be involved in ribosome assembly. Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
| >sp|P98199|AT8B2_MOUSE Probable phospholipid-transporting ATPase ID OS=Mus musculus GN=Atp8b2 PE=2 SV=2 | Back alignment and function description |
|---|
Score = 592 bits (1526), Expect = e-168, Method: Compositional matrix adjust.
Identities = 367/1098 (33%), Positives = 590/1098 (53%), Gaps = 102/1098 (9%)
Query: 2 KRYIYINDDETSQDL-YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
+R ND E ++ Y +N + KY ++ FLP NL+EQF N YFL + LQL
Sbjct: 32 ERRARANDREYNEKFQYASNCIKTSKYNIVTFLPVNLFEQFQEVANTYFLFLLILQLIPQ 91
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
I+ ++ +T PL+ + ++A K+A DDY R+ SD + N + V+ G+ + Q ++
Sbjct: 92 ISSLSWFTTIVPLVLVLTITAVKDATDDYFRHKSDNQVNNRHSQVLINGVLQQEQWMNVC 151
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELL 179
VG+I+ L N V DL+L+ +S+P G+CY+ETA LDGET++K R IP D L
Sbjct: 152 VGDIIKLENNQFVAADLLLLSSSEPHGLCYIETAELDGETNMKVRQAIPVTSELGDVSQL 211
Query: 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239
+ G + C P+ + +F G L + + PL+ +N +L+ C LRNTEW G+ +
Sbjct: 212 ARFDGEVICEPPNNKLDKFSGTL-----YWKENKFPLSNQNMLLRGCVLRNTEWCFGLVI 266
Query: 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWK-DTEARKQ 298
+ G +TKL G + K T++D +++ L IF F + + ++L +W+ + R Q
Sbjct: 267 FAGPDTKLMQNSGRTKFKRTSIDRLMNTLVLWIFGFLVCMGVILAIGNAIWEHEVGTRFQ 326
Query: 299 WYVLYPQEFPWYELLVIPL--------RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDY 350
Y+ PW E + + ++ + ++PIS+ VS+++++ ++ FI+WD
Sbjct: 327 VYL------PWDEAVDSAFFSGFLSFWSYIIILNTVVPISLYVSVEVIRLGHSYFINWDK 380
Query: 351 EMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN----- 405
+M + TP+ A T ++E+L QVEYI +DKTGTLT+N M+F +C I G YG+
Sbjct: 381 KMFCMKKRTPAEARTTTLNEELGQVEYIFSDKTGTLTQNIMVFNKCSINGHSYGDVFDVL 440
Query: 406 ----ETGDALK-----------------DVGLLNAITSGSPDVIRFLTVMAVCNTVIPAK 444
E G+ + D LL A+ G P F ++++C+TV+ +
Sbjct: 441 GHKAELGERPEPVDFSFNPLADKKFLFWDSSLLEAVKMGDPHTHEFFRLLSLCHTVMSEE 500
Query: 445 SKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDR 504
G + YKAQS DE ALV AA V ++ + + G+ + Y++L L+F + R
Sbjct: 501 KNEGELYYKAQSPDEGALVTAARNFGFVFRSRTPKTITVHELGTAITYQLLAILDFNNIR 560
Query: 505 KRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT--RTFVEAVEQYSQLGLRTLCLAW 562
KRMSV+V++ G I L KGAD +L H Q + + + +Y+ GLRTL LA+
Sbjct: 561 KRMSVIVRN-PEGKIRLYCKGADTILLDRLHPPTQELLSSTTDHLNEYAGDGLRTLVLAY 619
Query: 563 REVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETI 622
++++E+ Y+EW+ +AS RE R+A + + +E D+ +LG TAIED+LQ GVPETI
Sbjct: 620 KDLDEEYYEEWARRRLQASLAQDSREDRLASIYEEVESDMMLLGATAIEDKLQQGVPETI 679
Query: 623 ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 682
L A I W+LTGDKQ TA+ I SC ++ + ++ + G T EV L +
Sbjct: 680 ALLTLANIKIWVLTGDKQETAVNIGYSCKMLT-DDMTEVFVVTGHTVLEVREELRKARKK 738
Query: 683 M---------------RITTSEPKDV--------AFVVDGWALEIALK-HYRKAFTELAI 718
M +++S+ V A V++G +L AL+ F E A
Sbjct: 739 MVDSSHAVGNGFTYQGNLSSSKLTSVLEAVAGEYALVINGHSLAHALEADMELEFLETAC 798
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYR---TLAIGDGGNDVRMIQKADIGVGISGREGL 775
+ ICCRVTP QKAQ+VEL+K Y+ TLAIGDG NDV MI+ A IGVGISG+EG+
Sbjct: 799 ACKAVICCRVTPLQKAQVVELVKK--YKKAVTLAIGDGANDVSMIKTAHIGVGISGQEGI 856
Query: 776 QAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSG 835
QA A+DYS +F+FL+RL+LVHGR+SY R Y FYK+ + +F F G S
Sbjct: 857 QAVLASDYSFSQFKFLQRLLLVHGRWSYLRMCKFLCYFFYKNFAFTMVHFWFGFFCGFSA 916
Query: 836 TSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGW 894
++++ + YN+ YTS+PVL + D+D+ E M++P++ Q L N F
Sbjct: 917 QTVYDQYFITLYNIVYTSLPVLAMGVFDQDVPEQRSMEYPKLYEPGQLNLLFNKREFFIC 976
Query: 895 FGRSLFHAIVAFVISIHVYA-------YEKSEMEEVSMVALSGCIWLQAFVVALETNSFT 947
+ ++ +++ F I V+A + ++ + ++ + + + + + L+T +T
Sbjct: 977 IAQGIYTSVLMFFIPYGVFAEATRDDGTQLADYQSFAVTVATSLVIVVSVQIGLDTGYWT 1036
Query: 948 VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIM---FRLC-------SQPSYWITMFLIV 997
H IWG+L ++ I A+ S+G++ + FR +QP+ W+T+ L
Sbjct: 1037 AINHFFIWGSLAVYFA---ILFAMHSNGLFDMFPNQFRFVGNAQNTLAQPTVWLTIALTT 1093
Query: 998 AAGMGPIVALKYFRYTYR 1015
A + P+VA ++ R + +
Sbjct: 1094 AVCIMPVVAFRFLRLSLK 1111
|
Mus musculus (taxid: 10090) EC: 3 EC: . EC: 6 EC: . EC: 3 EC: . EC: 1 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1104 | ||||||
| 356543847 | 1107 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.997 | 0.872 | 0.0 | |
| 356549902 | 1106 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.998 | 0.867 | 0.0 | |
| 225446426 | 1105 | PREDICTED: phospholipid-transporting ATP | 1.0 | 0.999 | 0.894 | 0.0 | |
| 224132912 | 1107 | aminophospholipid ATPase [Populus tricho | 1.0 | 0.997 | 0.879 | 0.0 | |
| 302143322 | 1135 | unnamed protein product [Vitis vinifera] | 1.0 | 0.972 | 0.870 | 0.0 | |
| 334188194 | 1107 | phospholipid-translocating ATPase [Arabi | 1.0 | 0.997 | 0.873 | 0.0 | |
| 334188192 | 1139 | phospholipid-translocating ATPase [Arabi | 1.0 | 0.969 | 0.871 | 0.0 | |
| 297794981 | 1096 | hypothetical protein ARALYDRAFT_356659 [ | 0.990 | 0.997 | 0.867 | 0.0 | |
| 449478968 | 1103 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 0.997 | 0.998 | 0.857 | 0.0 | |
| 449438125 | 1112 | PREDICTED: LOW QUALITY PROTEIN: phosphol | 0.997 | 0.990 | 0.851 | 0.0 |
| >gi|356543847|ref|XP_003540371.1| PREDICTED: phospholipid-transporting ATPase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2050 bits (5311), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 966/1107 (87%), Positives = 1047/1107 (94%), Gaps = 3/1107 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YI+DDE+S D+YC NR+SNRKYT++NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNP STWGPLIFIFAVSA+KEAWDDYNRYLSDKKANEKEVWVVK+GIKK IQ+QD+
Sbjct: 61 ITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDKKANEKEVWVVKKGIKKHIQAQDVH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVLIGTSDPQGVCY+ETAALDGETDLKTR+IP+ACMG+D +LLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACMGIDVDLLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDND+CPLTIKNTILQSCYLRNTEWACGVAVY
Sbjct: 181 KIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETK+GM RGIPEPKLTA+DAMIDKLTGAIF+FQIVVV+VLG AGNVWKDTEA+K WY
Sbjct: 241 TGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
VLYP E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD++MID ET P
Sbjct: 301 VLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI G FYGNE GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAV 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+SGS DV+RFLTVMA+CNTVIP +SK G ILYKAQSQDE+ALVHAA++LHMV NK+ +I
Sbjct: 421 SSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAASRLHMVYFNKSGNI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LE+KF+ S+LQYE+LETLEFTSDRKRMSVV+KDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEVKFSTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYARAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
R F+EAVEQY+ LGLRTLCLAWRE++ DEY+EWSLMFKEASSTL+DREWR+AEVCQR+EH
Sbjct: 541 RHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL++LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LLSIDGKTE+EVCRSLERVL TMRITTSEPKDVAFVVDGWALEIAL HYRKAFTELA+LS
Sbjct: 661 LLSIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 960
HAIV FVISIH YA++KSEMEEVSMVALSGCIWLQAFVV +ETNSFT+ QH+AIWGNL A
Sbjct: 901 HAIVVFVISIHAYAFDKSEMEEVSMVALSGCIWLQAFVVTMETNSFTILQHMAIWGNLAA 960
Query: 961 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1020
FY+INWIFS +PSSGMYTIMFRLC QPSYWI +FL+VAAGMGPI+A+KYFRYTYR SKIN
Sbjct: 961 FYVINWIFSTLPSSGMYTIMFRLCRQPSYWIAIFLMVAAGMGPILAIKYFRYTYRPSKIN 1020
Query: 1021 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1079
LQQAER+GGPILSLGTIEPQPR+IEKDV+ LSITQP++R+PVYEPLLSDSPN +RRSFG
Sbjct: 1021 TLQQAERLGGPILSLGTIEPQPRSIEKDVSTLSITQPKNRNPVYEPLLSDSPNASRRSFG 1080
Query: 1080 SGTPFDFFQ--SPSRLSSIYSRNCKDN 1104
+GTPFDFFQ S +SS Y+RNCKDN
Sbjct: 1081 AGTPFDFFQSQSRLSVSSSYTRNCKDN 1107
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356549902|ref|XP_003543329.1| PREDICTED: phospholipid-transporting ATPase 2-like [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 2041 bits (5288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 960/1106 (86%), Positives = 1041/1106 (94%), Gaps = 2/1106 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YI+DDE+S D+YC NR+SNRKYT++NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYIDDDESSHDIYCDNRISNRKYTVLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNP STWGPLIFIFAVSA+KEAWDDYNRYLSD KANEKEVWVVK+GIKK IQ+QDI
Sbjct: 61 ITPVNPVSTWGPLIFIFAVSASKEAWDDYNRYLSDNKANEKEVWVVKKGIKKHIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVLIGTSDPQGVCY+ETAALDGETDLKTR+IP+AC+G+D +LLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYIETAALDGETDLKTRVIPSACVGIDVDLLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDND+CPLTIKNTILQSCYLRNTEWACGVAVY
Sbjct: 181 KIKGVIECPYPDKDIRRFDANMRLFPPFIDNDICPLTIKNTILQSCYLRNTEWACGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETK+GM RGIPEPKLTA+DAMIDKLTGAIF+FQIVVV+VLG AGNVWKDTEA+K WY
Sbjct: 241 TGNETKMGMCRGIPEPKLTAMDAMIDKLTGAIFIFQIVVVLVLGIAGNVWKDTEAKKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
VLYP E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD++MID ET P
Sbjct: 301 VLYPHEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDHQMIDLETSIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI G FYGNE GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCISGNFYGNENGDALKDVELLNAV 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+SGS DV+RFLTVMA+CNTVIP +SK G ILYKAQSQDE+ALVHAAA+LHMV NK+ +I
Sbjct: 421 SSGSSDVVRFLTVMAICNTVIPTQSKTGDILYKAQSQDEDALVHAAARLHMVYFNKSGNI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LE+KFN S+LQYE+LETLEFTSDRKRMSVV+KDC +G I LLSKGADEAILPYAHAG+QT
Sbjct: 481 LEVKFNTSILQYEVLETLEFTSDRKRMSVVLKDCQNGKILLLSKGADEAILPYAHAGKQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
R F+EAVEQY+ LGLRTLCLAWRE++ DEY+EWSLMFKEASSTL+DREWR+AEVCQR+EH
Sbjct: 541 RHFIEAVEQYAHLGLRTLCLAWRELKRDEYREWSLMFKEASSTLVDREWRVAEVCQRVEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL++LGVTAIEDRLQDGVPETI+TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIKTLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE+EVCRSLERVL TMRITTSEPKDVAFVVDGWALEIAL HYRKAFTELA+LS
Sbjct: 661 LLLIDGKTEEEVCRSLERVLRTMRITTSEPKDVAFVVDGWALEIALTHYRKAFTELAVLS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI FSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQILFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVLDKDLSEKTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 960
HAIV FVISIH YAY+KSEMEEVSMVALSGCIW+QAFVV +ETNSFT+ Q++AIWGNL A
Sbjct: 901 HAIVVFVISIHAYAYDKSEMEEVSMVALSGCIWIQAFVVTMETNSFTILQYMAIWGNLAA 960
Query: 961 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1020
FY+INWIFSA+PSSGMYTIMFRLC QPSYWI +FL+VAAGMGPI+A+KYFRYTYR SKIN
Sbjct: 961 FYVINWIFSALPSSGMYTIMFRLCRQPSYWIAIFLMVAAGMGPILAIKYFRYTYRPSKIN 1020
Query: 1021 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1079
LQQAER+GGPILSLGTIEPQ R++EKDV+ LSITQP++R+PVYEPLLSDSPN TRRSFG
Sbjct: 1021 ALQQAERLGGPILSLGTIEPQLRSVEKDVSTLSITQPKTRNPVYEPLLSDSPNATRRSFG 1080
Query: 1080 SGTPFDFF-QSPSRLSSIYSRNCKDN 1104
+GTPFDFF S Y+RNCKDN
Sbjct: 1081 AGTPFDFFQSQSRLSLSSYTRNCKDN 1106
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446426|ref|XP_002276115.1| PREDICTED: phospholipid-transporting ATPase 2-like isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2036 bits (5276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 988/1105 (89%), Positives = 1050/1105 (95%), Gaps = 1/1105 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YINDDE SQ+LYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDDELSQELYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVV+QGIKK IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGIKKHIQAQDIC 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLREN+EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR+IP+ACMG+DFELLH
Sbjct: 121 VGNVVWLRENEEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRVIPSACMGIDFELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD NLRL PPFIDND CPLTIKNTILQSCYLRNTEW CGVAVY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANLRLFPPFIDNDFCPLTIKNTILQSCYLRNTEWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETKLGM+RGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLG AGNVWKDTEA KQWY
Sbjct: 241 TGNETKLGMSRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGIAGNVWKDTEAVKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
VLYP++ PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD +MID ET TP
Sbjct: 301 VLYPKKGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDNQMIDQETSTP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN MIFRRCCIGGIFYGNE+GDALKDV LLNA+
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENIMIFRRCCIGGIFYGNESGDALKDVELLNAV 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+SGSPDVI+FLTVMA+CNTVIP KSK GAI YKAQSQDE+ALV AAA+LHMV VNKNA+
Sbjct: 421 SSGSPDVIQFLTVMALCNTVIPVKSKTGAISYKAQSQDEDALVQAAARLHMVFVNKNANT 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI FN S++QYE+L+TLEFTSDRKRMSVVVKDC +G I LLSKGADEAI+PYA AGQQT
Sbjct: 481 LEINFNASIIQYEVLDTLEFTSDRKRMSVVVKDCQNGKIFLLSKGADEAIIPYACAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RTF EAVEQYSQLGLRTLCLAWRE++EDEY++WSLMFKEA+STL+DREWR+AEVCQRLEH
Sbjct: 541 RTFTEAVEQYSQLGLRTLCLAWRELKEDEYRDWSLMFKEANSTLVDREWRLAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL++LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLEILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL I+GKTEDEV RSL+RVLLTMRITTSEPKDVAFV+DGWALEIALKHYRKAFT+LAILS
Sbjct: 661 LLLINGKTEDEVGRSLDRVLLTMRITTSEPKDVAFVIDGWALEIALKHYRKAFTDLAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTA+CCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTALCCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSIPVLVSVLDKDLSEKTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 960
HAIV FVISIH YAYEKSEMEEVSMVALSGCIWLQAFVV +ETNSFTV QHLAIWGNL A
Sbjct: 901 HAIVVFVISIHAYAYEKSEMEEVSMVALSGCIWLQAFVVTIETNSFTVLQHLAIWGNLAA 960
Query: 961 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1020
FYIINWI SA+P+SG+YTIMFRLC QPSYWITMFLIV GMGP++A+KYFRYTYR SKIN
Sbjct: 961 FYIINWILSAVPASGLYTIMFRLCKQPSYWITMFLIVVTGMGPVLAIKYFRYTYRPSKIN 1020
Query: 1021 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1079
LQQAER+GGPILSLG IEPQPR+IEKDV+PLSIT P++R+PVYEPLLSDSPN TR+SFG
Sbjct: 1021 TLQQAERLGGPILSLGNIEPQPRSIEKDVSPLSITLPKNRNPVYEPLLSDSPNSTRKSFG 1080
Query: 1080 SGTPFDFFQSPSRLSSIYSRNCKDN 1104
S T FDFF S SRLSS YSRNCKDN
Sbjct: 1081 SATTFDFFPSQSRLSSSYSRNCKDN 1105
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224132912|ref|XP_002327910.1| aminophospholipid ATPase [Populus trichocarpa] gi|222837319|gb|EEE75698.1| aminophospholipid ATPase [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 2036 bits (5276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 974/1107 (87%), Positives = 1039/1107 (93%), Gaps = 3/1107 (0%)
Query: 1 MKRYIYINDDETS--QDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLW 58
MKR++YINDDE+S DLYC NR+SNRKYTL+NFLPKNL EQFSRFMNQYFLLIACLQLW
Sbjct: 1 MKRFVYINDDESSPTHDLYCDNRISNRKYTLLNFLPKNLMEQFSRFMNQYFLLIACLQLW 60
Query: 59 SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQD 118
SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEK+VW+V++GIKK IQ+QD
Sbjct: 61 SLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKQVWIVRKGIKKHIQAQD 120
Query: 119 IRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFEL 178
I VGN+VWLRENDEVPCDLVLIGTSDPQG+CY+ETAALDGE DLKTR+ P+ACMG+DFEL
Sbjct: 121 ICVGNLVWLRENDEVPCDLVLIGTSDPQGLCYIETAALDGEIDLKTRVTPSACMGIDFEL 180
Query: 179 LHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238
LHKIKGVIECP PDKDIRR D NLRL PPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA
Sbjct: 181 LHKIKGVIECPNPDKDIRRLDANLRLFPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 240
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQ 298
VYTGNETKLGM+RGIPEPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARK
Sbjct: 241 VYTGNETKLGMSRGIPEPKLTALDAMIDKLTGAIFVFQIVVVMVLGIAGNVWKDTEARKL 300
Query: 299 WYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETD 358
WYVLYP E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWD EMID ET+
Sbjct: 301 WYVLYPDEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDREMIDLETE 360
Query: 359 TPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLN 418
TPSHATNTAISEDL QVEYILTDKTGTLTEN+M+FR CCI G FYGNE GDA KD LLN
Sbjct: 361 TPSHATNTAISEDLGQVEYILTDKTGTLTENKMVFRICCISGNFYGNEAGDASKDKQLLN 420
Query: 419 AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 478
AI+SGSPDV+RFLTVMA+CNTVIP +SK GAILYKAQSQDE+ALVHAAA+L+MVLV KN
Sbjct: 421 AISSGSPDVVRFLTVMAICNTVIPVQSKTGAILYKAQSQDEDALVHAAAKLNMVLVCKNG 480
Query: 479 SILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ 538
+ILE++FN S +QYE+LETLEFTSDRKRMSVVV+DC +G I LLSKGADEAILPYA GQ
Sbjct: 481 NILELRFNTSAIQYEVLETLEFTSDRKRMSVVVRDCQNGKILLLSKGADEAILPYASPGQ 540
Query: 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598
QTR F EAVEQYSQLGLRTLCLAWRE++EDEY+EWS MF+EASSTL+DREWRIAEVCQRL
Sbjct: 541 QTRIFNEAVEQYSQLGLRTLCLAWRELKEDEYEEWSFMFREASSTLVDREWRIAEVCQRL 600
Query: 599 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 658
E DL+VLGVTAIEDRLQDGVPETI TLRKAGI+FWMLTGDKQNTAIQIALSCNFISPEPK
Sbjct: 601 ERDLEVLGVTAIEDRLQDGVPETIYTLRKAGIHFWMLTGDKQNTAIQIALSCNFISPEPK 660
Query: 659 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718
GQLL IDGKTE+EV RSLERVLLTMR T SEPKDVAFVVDGWALEIALKHY KAFTELAI
Sbjct: 661 GQLLLIDGKTEEEVGRSLERVLLTMRTTASEPKDVAFVVDGWALEIALKHYWKAFTELAI 720
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
LSRTAICCRVTPSQKAQLV++LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAA
Sbjct: 721 LSRTAICCRVTPSQKAQLVQILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAA 780
Query: 779 RAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSL 838
RAADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSL
Sbjct: 781 RAADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSL 840
Query: 839 FNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRS 898
FNSVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGRLLNPSTFAGWFGRS
Sbjct: 841 FNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRLLNPSTFAGWFGRS 900
Query: 899 LFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNL 958
LFHAIV FVISIH YA+EKSEMEEV MVALSGCIWLQAFVV LETNSFT+ QHLAIWGNL
Sbjct: 901 LFHAIVVFVISIHAYAFEKSEMEEVGMVALSGCIWLQAFVVTLETNSFTILQHLAIWGNL 960
Query: 959 VAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASK 1018
+AFY+INWI SAIPSSGMYTIMFRLC QPSYW+T+ LIVAAGMGPI+A+KYFRYTYR SK
Sbjct: 961 IAFYVINWIVSAIPSSGMYTIMFRLCRQPSYWLTILLIVAAGMGPILAIKYFRYTYRPSK 1020
Query: 1019 INILQQAERMGGPILSLGTIE-PQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPNTRRS 1077
IN LQQAER+GGPILSLG IE PQ R IEK+VAPLSITQ ++R+PVYEPLLSDSP+TRRS
Sbjct: 1021 INTLQQAERLGGPILSLGNIEPPQQRLIEKEVAPLSITQSKNRNPVYEPLLSDSPSTRRS 1080
Query: 1078 FGSGTPFDFFQSPSRLSSIYSRNCKDN 1104
FG GTPFDFFQS SRLSS Y+RNCKDN
Sbjct: 1081 FGPGTPFDFFQSQSRLSSNYTRNCKDN 1107
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|302143322|emb|CBI21883.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 2022 bits (5238), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 988/1135 (87%), Positives = 1050/1135 (92%), Gaps = 31/1135 (2%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YINDDE SQ+LYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDDELSQELYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVV+QGIKK IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVRQGIKKHIQAQDIC 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLREN+EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR+IP+ACMG+DFELLH
Sbjct: 121 VGNVVWLRENEEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRVIPSACMGIDFELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD NLRL PPFIDND CPLTIKNTILQSCYLRNTEW CGVAVY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANLRLFPPFIDNDFCPLTIKNTILQSCYLRNTEWVCGVAVY 240
Query: 241 TG------------------------------NETKLGMTRGIPEPKLTAVDAMIDKLTG 270
TG NETKLGM+RGIPEPKLTAVDAMIDKLTG
Sbjct: 241 TGKDTRALLNNGRVLFGGSFQVFLLKAFDCLRNETKLGMSRGIPEPKLTAVDAMIDKLTG 300
Query: 271 AIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPIS 330
AIFVFQIVVVIVLG AGNVWKDTEA KQWYVLYP++ PWYELLVIPLRFELLCSIMIPIS
Sbjct: 301 AIFVFQIVVVIVLGIAGNVWKDTEAVKQWYVLYPKKGPWYELLVIPLRFELLCSIMIPIS 360
Query: 331 IKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENR 390
IKVSLDLVKSLYAKFIDWD +MID ET TPSHATNTAISEDL QVEYILTDKTGTLTEN
Sbjct: 361 IKVSLDLVKSLYAKFIDWDNQMIDQETSTPSHATNTAISEDLGQVEYILTDKTGTLTENI 420
Query: 391 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI 450
MIFRRCCIGGIFYGNE+GDALKDV LLNA++SGSPDVI+FLTVMA+CNTVIP KSK GAI
Sbjct: 421 MIFRRCCIGGIFYGNESGDALKDVELLNAVSSGSPDVIQFLTVMALCNTVIPVKSKTGAI 480
Query: 451 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 510
YKAQSQDE+ALV AAA+LHMV VNKNA+ LEI FN S++QYE+L+TLEFTSDRKRMSVV
Sbjct: 481 SYKAQSQDEDALVQAAARLHMVFVNKNANTLEINFNASIIQYEVLDTLEFTSDRKRMSVV 540
Query: 511 VKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEY 570
VKDC +G I LLSKGADEAI+PYA AGQQTRTF EAVEQYSQLGLRTLCLAWRE++EDEY
Sbjct: 541 VKDCQNGKIFLLSKGADEAIIPYACAGQQTRTFTEAVEQYSQLGLRTLCLAWRELKEDEY 600
Query: 571 QEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGI 630
++WSLMFKEA+STL+DREWR+AEVCQRLEHDL++LGVTAIEDRLQDGVPETIETLRKAGI
Sbjct: 601 RDWSLMFKEANSTLVDREWRLAEVCQRLEHDLEILGVTAIEDRLQDGVPETIETLRKAGI 660
Query: 631 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690
NFWMLTGDKQNTAIQIALSCNFISPEPKGQLL I+GKTEDEV RSL+RVLLTMRITTSEP
Sbjct: 661 NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLLINGKTEDEVGRSLDRVLLTMRITTSEP 720
Query: 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAI 750
KDVAFV+DGWALEIALKHYRKAFT+LAILSRTA+CCRVTPSQKAQLVE+LKSCDYRTLAI
Sbjct: 721 KDVAFVIDGWALEIALKHYRKAFTDLAILSRTALCCRVTPSQKAQLVEILKSCDYRTLAI 780
Query: 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 810
GDGGNDVRMIQ+ADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS
Sbjct: 781 GDGGNDVRMIQQADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLS 840
Query: 811 QYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTV 870
QYSFYKSLLICFIQIFFSFISG+SGTSLFNSVSLMAYNVFYTSIPVLVS +DKDLSE TV
Sbjct: 841 QYSFYKSLLICFIQIFFSFISGVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEKTV 900
Query: 871 MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSG 930
MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIV FVISIH YAYEKSEMEEVSMVALSG
Sbjct: 901 MQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVVFVISIHAYAYEKSEMEEVSMVALSG 960
Query: 931 CIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYW 990
CIWLQAFVV +ETNSFTV QHLAIWGNL AFYIINWI SA+P+SG+YTIMFRLC QPSYW
Sbjct: 961 CIWLQAFVVTIETNSFTVLQHLAIWGNLAAFYIINWILSAVPASGLYTIMFRLCKQPSYW 1020
Query: 991 ITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAERMGGPILSLGTIEPQPRAIEKDVA 1050
ITMFLIV GMGP++A+KYFRYTYR SKIN LQQAER+GGPILSLG IEPQPR+IEKDV+
Sbjct: 1021 ITMFLIVVTGMGPVLAIKYFRYTYRPSKINTLQQAERLGGPILSLGNIEPQPRSIEKDVS 1080
Query: 1051 PLSITQPRSRSPVYEPLLSDSPN-TRRSFGSGTPFDFFQSPSRLSSIYSRNCKDN 1104
PLSIT P++R+PVYEPLLSDSPN TR+SFGS T FDFF S SRLSS YSRNCKDN
Sbjct: 1081 PLSITLPKNRNPVYEPLLSDSPNSTRKSFGSATTFDFFPSQSRLSSSYSRNCKDN 1135
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188194|ref|NP_001190471.1| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|12229647|sp|P98205.1|ALA2_ARATH RecName: Full=Phospholipid-transporting ATPase 2; Short=AtALA2; AltName: Full=Aminophospholipid ATPase 2; AltName: Full=Aminophospholipid flippase 2 gi|332007696|gb|AED95079.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 2017 bits (5225), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 967/1107 (87%), Positives = 1039/1107 (93%), Gaps = 3/1107 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 661 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSVPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 960
HAI+ FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ETNSFTV QHL+IWGNLV
Sbjct: 901 HAIIVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETNSFTVLQHLSIWGNLVG 960
Query: 961 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1020
FY IN++FSAIPSSGMYTIMFRLCSQPSYWITMFLIV AGMGPI ALKYFRYTYR SKIN
Sbjct: 961 FYAINFLFSAIPSSGMYTIMFRLCSQPSYWITMFLIVGAGMGPIFALKYFRYTYRPSKIN 1020
Query: 1021 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1079
ILQQAERMGGPIL+LG IE QPR IEKD++P+SITQP++RSPVYEPLLSDSPN TRRSFG
Sbjct: 1021 ILQQAERMGGPILTLGNIETQPRTIEKDLSPISITQPKNRSPVYEPLLSDSPNATRRSFG 1080
Query: 1080 SGTPFDFFQSPSRLSSI--YSRNCKDN 1104
GTPF+FFQS SRLSS Y+RNCKDN
Sbjct: 1081 PGTPFEFFQSQSRLSSSSGYTRNCKDN 1107
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|334188192|ref|NP_568633.2| phospholipid-translocating ATPase [Arabidopsis thaliana] gi|332007695|gb|AED95078.1| phospholipid-translocating ATPase [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 2012 bits (5212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 965/1107 (87%), Positives = 1038/1107 (93%), Gaps = 3/1107 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
+ R++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 33 LDRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 92
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 93 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 152
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 153 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 212
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 213 KMKGVIECPVPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 272
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 273 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVLVLGIAGNVWKDTEARKQWY 332
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 333 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 392
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 393 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 452
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTV+P +SKAG I+YKAQSQDE+ALV AA++LHMV V KNA++
Sbjct: 453 TSGSTDVIRFLTVMAICNTVLPVQSKAGDIVYKAQSQDEDALVIAASKLHMVFVGKNANL 512
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGSV++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 513 LEIRFNGSVIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYARAGQQT 572
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 573 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 632
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 633 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 692
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTE++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+RK F ELAILS
Sbjct: 693 LLMIDGKTEEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHRKDFVELAILS 752
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 753 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 812
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISG+SGTSLFN
Sbjct: 813 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGVSGTSLFN 872
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTS+PVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 873 SVSLMAYNVFYTSVPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 932
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 960
HAI+ FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ETNSFTV QHL+IWGNLV
Sbjct: 933 HAIIVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETNSFTVLQHLSIWGNLVG 992
Query: 961 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1020
FY IN++FSAIPSSGMYTIMFRLCSQPSYWITMFLIV AGMGPI ALKYFRYTYR SKIN
Sbjct: 993 FYAINFLFSAIPSSGMYTIMFRLCSQPSYWITMFLIVGAGMGPIFALKYFRYTYRPSKIN 1052
Query: 1021 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1079
ILQQAERMGGPIL+LG IE QPR IEKD++P+SITQP++RSPVYEPLLSDSPN TRRSFG
Sbjct: 1053 ILQQAERMGGPILTLGNIETQPRTIEKDLSPISITQPKNRSPVYEPLLSDSPNATRRSFG 1112
Query: 1080 SGTPFDFFQSPSRLSSI--YSRNCKDN 1104
GTPF+FFQS SRLSS Y+RNCKDN
Sbjct: 1113 PGTPFEFFQSQSRLSSSSGYTRNCKDN 1139
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297794981|ref|XP_002865375.1| hypothetical protein ARALYDRAFT_356659 [Arabidopsis lyrata subsp. lyrata] gi|297311210|gb|EFH41634.1| hypothetical protein ARALYDRAFT_356659 [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 1988 bits (5151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 960/1107 (86%), Positives = 1028/1107 (92%), Gaps = 14/1107 (1%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKR++YINDDE S++L C NR+SNRKYTL NFLPKNLWEQFSRFMNQYFLLIACLQLWSL
Sbjct: 1 MKRFVYINDDEASKELCCDNRISNRKYTLWNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSA+KEAWDDY+RYLSDKKANEKEVW+VKQGIKK IQ+QDI+
Sbjct: 61 ITPVNPASTWGPLIFIFAVSASKEAWDDYHRYLSDKKANEKEVWIVKQGIKKHIQAQDIQ 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGNIVWLRENDEVPCDLVL+GTSDPQGVCYVETAALDGETDLKTR+IP+AC+G+D ELLH
Sbjct: 121 VGNIVWLRENDEVPCDLVLLGTSDPQGVCYVETAALDGETDLKTRVIPSACVGIDLELLH 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
K+KGVIECP PDKDIRRFD N+RL PPFIDNDVC LTIKNT+LQSCYLRNTEWACGV+VY
Sbjct: 181 KMKGVIECPIPDKDIRRFDANMRLFPPFIDNDVCSLTIKNTLLQSCYLRNTEWACGVSVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGN+TKLGM+RGI EPKLTA+DAMIDKLTGAIFVFQIVVV+VLG AGNVWKDTEARKQWY
Sbjct: 241 TGNQTKLGMSRGIAEPKLTAMDAMIDKLTGAIFVFQIVVVMVLGVAGNVWKDTEARKQWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V YP+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVK LYAKFI+WD EMID ET T
Sbjct: 301 VQYPEEAPWYELLVIPLRFELLCSIMIPISIKVSLDLVKGLYAKFIEWDVEMIDQETGTA 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
S+A NTAISEDL QVEYILTDKTGTLT+N+MIFRRCCIGGIFYGNE GDALKD LLNAI
Sbjct: 361 SYAANTAISEDLGQVEYILTDKTGTLTDNKMIFRRCCIGGIFYGNENGDALKDAQLLNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
TSGS DVIRFLTVMA+CNTVIP +SKAG I+YKAQSQDE+ALV AAA+LHMV V KNA++
Sbjct: 421 TSGSTDVIRFLTVMAICNTVIPVQSKAGDIVYKAQSQDEDALVIAAAKLHMVFVGKNANL 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNGS+++YE+LE LEFTSDRKRMSVVVKDC +G I LLSKGADEAILPYA AGQQT
Sbjct: 481 LEIRFNGSIIRYEVLEILEFTSDRKRMSVVVKDCQNGKIILLSKGADEAILPYACAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RT +AVE YSQLGLRTLCLAWRE+EE+EY EWS+ FKEASS L+DREWRIAEVCQRLEH
Sbjct: 541 RTIGDAVEHYSQLGLRTLCLAWRELEENEYLEWSVKFKEASSLLVDREWRIAEVCQRLEH 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
DL +LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ
Sbjct: 601 DLYILGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKT+++V RSLERVLLTMRIT SEPKDVAFV+DGWALEIALKH+ K F ELAILS
Sbjct: 661 LLMIDGKTKEDVSRSLERVLLTMRITASEPKDVAFVIDGWALEIALKHHHKDFVELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVE+LKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVEILKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIG+FRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF LFN
Sbjct: 781 ADYSIGRFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF-----------LFN 829
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTSIPVLVS IDKDLSE +VMQHPQILFYCQAGRLLNPSTFAGWFGRSLF
Sbjct: 830 SVSLMAYNVFYTSIPVLVSVIDKDLSEASVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 889
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 960
HAIV FVI+IH YAYEKSEMEE+ MVALSGCIWLQAFVVA ETNSFTV QHL+IWGNLVA
Sbjct: 890 HAIVVFVITIHAYAYEKSEMEELGMVALSGCIWLQAFVVAQETNSFTVLQHLSIWGNLVA 949
Query: 961 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1020
FY IN++FSAIPSSGMYTIMFRLCSQPSYWITMFLIV AGMGPI ALKYFRYTYR SKIN
Sbjct: 950 FYAINFLFSAIPSSGMYTIMFRLCSQPSYWITMFLIVGAGMGPIFALKYFRYTYRPSKIN 1009
Query: 1021 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1079
ILQQAERMGGPIL+LG IE QPR IEKD++PLSITQP++RSPVYEPLLSDSPN TRRSFG
Sbjct: 1010 ILQQAERMGGPILTLGNIETQPRTIEKDLSPLSITQPKNRSPVYEPLLSDSPNATRRSFG 1069
Query: 1080 SGTPFDFFQSPSRLSSI--YSRNCKDN 1104
GTPF+FFQS SRLSS Y+RNCKDN
Sbjct: 1070 PGTPFEFFQSQSRLSSSSGYTRNCKDN 1096
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449478968|ref|XP_004155467.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1969 bits (5102), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 948/1106 (85%), Positives = 1032/1106 (93%), Gaps = 5/1106 (0%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YIND+E S DLYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYF LIACLQLW L
Sbjct: 1 MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFXLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQG +K+IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLRENDEVP DLVLIGTSDPQG+CY+ET+ALDGETDLKTR+IP+ACMG+DF+LL+
Sbjct: 121 VGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLN 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDNDVCPLTIKNTILQSCYLRNT+W CGVAVY
Sbjct: 181 KIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETKLGM+RG+PEPKLTA+DAMIDKLTGAIFVFQ+VVV+VLG AGNVWKD+EARK WY
Sbjct: 241 TGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V +P+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID E+ P
Sbjct: 301 VQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDCESGIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI GIFYGNE GDALKD L+NAI
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+ SPDV+RFLT+MA+CNTV+P KSK+G ILYKAQSQDE+ALV+AAA LHMV VNK+A+I
Sbjct: 421 ANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSATI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT 540
LEI+FNG + +YE+L+TLEFTS+RKRMSVVVKDC +G I L+SKGADEAILPYA+AGQQT
Sbjct: 481 LEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLMSKGADEAILPYAYAGQQT 540
Query: 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
RTF+EAV+QY+QLGLRTLCLAWRE+EEDEY+EW+ MFKEA+STL+DREWR+AEVCQRLE
Sbjct: 541 RTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRLAEVCQRLER 600
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
+ +VLGVTAIEDRLQDGVPETIETLR+AGINFWMLTGDKQNTAIQIAL CNFISPEPKGQ
Sbjct: 601 NFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCNFISPEPKGQ 660
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
LL IDGKTEDEVCRSLERV+LTM+ TTSEPKDVAFVVDGWALEIALK+YR+AFTELAILS
Sbjct: 661 LLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRRAFTELAILS 720
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISGREGLQAARA
Sbjct: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISGREGLQAARA 780
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFN 840
ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI FSFISG+SGTSLFN
Sbjct: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFISGVSGTSLFN 840
Query: 841 SVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLF 900
SVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGR+LNPSTFAGWFGRSLF
Sbjct: 841 SVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTFAGWFGRSLF 900
Query: 901 HAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVA 960
HA+V FVISIH YA EKSEM EVSMVALSGCIWLQAFVV LETNSFT+ QHLAIWGNL A
Sbjct: 901 HAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTILQHLAIWGNLAA 960
Query: 961 FYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKIN 1020
FY+INWIFSAIPSSGMYTIMFRLC QPSYWIT+FLIV GMGP++A+KYFRYTYR SKIN
Sbjct: 961 FYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFRYTYRPSKIN 1020
Query: 1021 ILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDSPN-TRRSFG 1079
LQQAER+GGPILSL IE QPR IEK+V+P+SITQP++R+ VYEPLLSDSP TRRS
Sbjct: 1021 TLQQAERLGGPILSLKNIEHQPRPIEKEVSPISITQPKNRNTVYEPLLSDSPTATRRSLA 1080
Query: 1080 -SGTPFDFFQSPSRLSSIYSRNCKDN 1104
S + FDFFQ+P S YSRN KDN
Sbjct: 1081 SSSSSFDFFQTPP--PSSYSRN-KDN 1103
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449438125|ref|XP_004136840.1| PREDICTED: LOW QUALITY PROTEIN: phospholipid-transporting ATPase 2-like [Cucumis sativus] | Back alignment and taxonomy information |
|---|
Score = 1966 bits (5092), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 949/1115 (85%), Positives = 1033/1115 (92%), Gaps = 14/1115 (1%)
Query: 1 MKRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSL 60
MKRY+YIND+E S DLYC NR+SNRKYTL+NFLPKNLWEQFSRFMNQYFLLIACLQLW L
Sbjct: 1 MKRYVYINDNEPSNDLYCDNRISNRKYTLLNFLPKNLWEQFSRFMNQYFLLIACLQLWPL 60
Query: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIR 120
ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQG +K+IQ+QDI
Sbjct: 61 ITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGTRKIIQAQDIH 120
Query: 121 VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLH 180
VGN+VWLRENDEVP DLVLIGTSDPQG+CY+ET+ALDGETDLKTR+IP+ACMG+DF+LL+
Sbjct: 121 VGNLVWLRENDEVPSDLVLIGTSDPQGICYIETSALDGETDLKTRVIPSACMGIDFDLLN 180
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
KIKGVIECP PDKDIRRFD N+RL PPFIDNDVCPLTIKNTILQSCYLRNT+W CGVAVY
Sbjct: 181 KIKGVIECPKPDKDIRRFDANIRLFPPFIDNDVCPLTIKNTILQSCYLRNTDWVCGVAVY 240
Query: 241 TGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWY 300
TGNETKLGM+RG+PEPKLTA+DAMIDKLTGAIFVFQ+VVV+VLG AGNVWKD+EARK WY
Sbjct: 241 TGNETKLGMSRGVPEPKLTAMDAMIDKLTGAIFVFQLVVVVVLGIAGNVWKDSEARKLWY 300
Query: 301 VLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
V +P+E PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID E+ P
Sbjct: 301 VQHPEEGPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDCESGIP 360
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAI 420
SHATNTAISEDL QVEYILTDKTGTLTEN+MIFRRCCI GIFYGNE GDALKD L+NAI
Sbjct: 361 SHATNTAISEDLGQVEYILTDKTGTLTENKMIFRRCCINGIFYGNENGDALKDKKLVNAI 420
Query: 421 TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASI 480
+ SPDV+RFLT+MA+CNTV+P KSK+G ILYKAQSQDE+ALV+AAA LHMV VNK+A+I
Sbjct: 421 ANSSPDVLRFLTIMAICNTVVPTKSKSGNILYKAQSQDEDALVNAAAYLHMVFVNKSATI 480
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--- 537
LEI+FNG + +YE+L+TLEFTS+RKRMSVVVKDC +G I L+SKGADEAILPYA+AG
Sbjct: 481 LEIQFNGMLNRYELLDTLEFTSERKRMSVVVKDCQNGKIVLMSKGADEAILPYAYAGNRK 540
Query: 538 ------QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRI 591
QQTRTF+EAV+QY+QLGLRTLCLAWRE+EEDEY+EW+ MFKEA+STL+DREWR+
Sbjct: 541 IXILYFQQTRTFIEAVDQYAQLGLRTLCLAWRELEEDEYREWAFMFKEANSTLVDREWRL 600
Query: 592 AEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651
AEVCQRLE + +VLGVTAIEDRLQDGVPETIETLR+AGINFWMLTGDKQNTAIQIAL CN
Sbjct: 601 AEVCQRLERNFEVLGVTAIEDRLQDGVPETIETLRRAGINFWMLTGDKQNTAIQIALLCN 660
Query: 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRK 711
FISPEPKGQLL IDGKTEDEVCRSLERV+LTM+ TTSEPKDVAFVVDGWALEIALK+YR+
Sbjct: 661 FISPEPKGQLLLIDGKTEDEVCRSLERVVLTMKTTTSEPKDVAFVVDGWALEIALKNYRR 720
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ+ADIGVGISG
Sbjct: 721 AFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQQADIGVGISG 780
Query: 772 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831
REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQI FSFIS
Sbjct: 781 REGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQISFSFIS 840
Query: 832 GLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTF 891
G+SGTSLFNSVSLMAYNVFYTSIPVLVS +DKDLSE TVMQHPQILFYCQAGR+LNPSTF
Sbjct: 841 GVSGTSLFNSVSLMAYNVFYTSIPVLVSVLDKDLSEETVMQHPQILFYCQAGRILNPSTF 900
Query: 892 AGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQH 951
AGWFGRSLFHA+V FVISIH YA EKSEM EVSMVALSGCIWLQAFVV LETNSFT+ QH
Sbjct: 901 AGWFGRSLFHAVVVFVISIHAYANEKSEMVEVSMVALSGCIWLQAFVVTLETNSFTILQH 960
Query: 952 LAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFR 1011
LAIWGNL AFY+INWIFSAIPSSGMYTIMFRLC QPSYWIT+FLIV GMGP++A+KYFR
Sbjct: 961 LAIWGNLAAFYVINWIFSAIPSSGMYTIMFRLCGQPSYWITIFLIVGVGMGPLLAIKYFR 1020
Query: 1012 YTYRASKINILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSRSPVYEPLLSDS 1071
YTYR SKIN LQQAER+GGPILSL IE QPR IEK+V+P+SITQP++R+ VYEPLLSDS
Sbjct: 1021 YTYRPSKINTLQQAERLGGPILSLKNIEHQPRPIEKEVSPISITQPKNRNTVYEPLLSDS 1080
Query: 1072 PN-TRRSFG-SGTPFDFFQSPSRLSSIYSRNCKDN 1104
P TRRS S + FDFFQ+P S YSRN KDN
Sbjct: 1081 PTATRRSLASSSSSFDFFQTPP--PSSYSRN-KDN 1112
|
Source: Cucumis sativus Species: Cucumis sativus Genus: Cucumis Family: Cucurbitaceae Order: Cucurbitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1104 | ||||||
| DICTYBASE|DDB_G0282959 | 1536 | DDB_G0282959 "transmembrane pr | 0.365 | 0.262 | 0.468 | 3.9e-203 | |
| DICTYBASE|DDB_G0269380 | 1313 | DDB_G0269380 "P-type ATPase" [ | 0.491 | 0.413 | 0.354 | 6.4e-163 | |
| MGI|MGI:1330848 | 1149 | Atp8a1 "ATPase, aminophospholi | 0.913 | 0.878 | 0.357 | 1.1e-158 | |
| UNIPROTKB|Q9Y2Q0 | 1164 | ATP8A1 "Probable phospholipid- | 0.557 | 0.528 | 0.356 | 1.4e-157 | |
| UNIPROTKB|Q29449 | 1149 | ATP8A1 "Probable phospholipid- | 0.913 | 0.878 | 0.355 | 3.3e-157 | |
| FB|FBgn0259221 | 1350 | CG42321 [Drosophila melanogast | 0.886 | 0.725 | 0.365 | 3.8e-156 | |
| UNIPROTKB|F1PHG9 | 1164 | ATP8A1 "Uncharacterized protei | 0.557 | 0.528 | 0.352 | 5.5e-156 | |
| UNIPROTKB|F1NX55 | 1150 | ATP8A1 "Uncharacterized protei | 0.863 | 0.828 | 0.361 | 1e-155 | |
| MGI|MGI:1354710 | 1148 | Atp8a2 "ATPase, aminophospholi | 0.540 | 0.520 | 0.349 | 3.4e-154 | |
| ZFIN|ZDB-GENE-100209-2 | 1135 | atp8a2 "ATPase, aminophospholi | 0.492 | 0.479 | 0.366 | 2.4e-153 |
| DICTYBASE|DDB_G0282959 DDB_G0282959 "transmembrane protein" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 936 (334.5 bits), Expect = 3.9e-203, Sum P(4) = 3.9e-203
Identities = 192/410 (46%), Positives = 264/410 (64%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R IY ND E ++ Y +NR+SN KYT++ F+PKNL EQF R MN YFL+I LQL+ IT
Sbjct: 22 RTIYANDIERNKK-YPSNRISNTKYTIITFIPKNLMEQFGRAMNIYFLMIGILQLFPSIT 80
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
PV+P STWG L FIFA+SA KEA+DDYNR DKKANE+ +++ K+ IQSQ+I VG
Sbjct: 81 PVDPVSTWGALFFIFAISAVKEAFDDYNRSRRDKKANERIYNILRNNEKQQIQSQNILVG 140
Query: 123 NIVWLRENDEVPCDLVLIGTSDP-QGVCYVETAALDGETDLKTRLIPAACMGMDFELLHK 181
+IV+L EN+E+PCDL+++ TSD YV+T+ LDGETDLK + G++ L
Sbjct: 141 DIVYLTENEEIPCDLLVLSTSDKITNSLYVQTSNLDGETDLKIKYSIKETSGLELSQLKS 200
Query: 182 IKGVIECPGPDKDIRRFDGNL-----RLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236
+GV+ECP P+ +I +FD L R + F +D P+ N +LQ+ +L+NT + G
Sbjct: 201 FQGVLECPVPNAEINKFDSRLSMRANRKVNTFSHSDWLPVDSSNLVLQATHLKNTNYIYG 260
Query: 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEAR 296
+ VYTGNETKLG + K T +D I++ T G G+ + +
Sbjct: 261 LVVYTGNETKLGKNKMDVPTKWTKLDKQINRTTIVIFCIQLTLVLIFGFIGDYIRIIQGH 320
Query: 297 KQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPE 356
QWY+ Y + ++IPLRF LL S+MIPIS+KV++D++K YA FI+WD +M + +
Sbjct: 321 TQWYLDYDDTSLSSKTIIIPLRFLLLNSMMIPISLKVTIDVIKYAYALFINWDLKMYNSD 380
Query: 357 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE 406
D P+ A +TA+SEDL Q+EYI TDKTGTLTEN M+F +C I GI Y +
Sbjct: 381 IDCPATANSTALSEDLGQIEYIFTDKTGTLTENVMLFSKCSINGIVYNKD 430
|
|
| DICTYBASE|DDB_G0269380 DDB_G0269380 "P-type ATPase" [Dictyostelium discoideum (taxid:44689)] | Back alignment and assigned GO terms |
|---|
Score = 900 (321.9 bits), Expect = 6.4e-163, Sum P(2) = 6.4e-163
Identities = 200/564 (35%), Positives = 322/564 (57%)
Query: 430 FLTVMAVCNTVIPAKSKA--GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG 487
FLT++AVC++V+P + I+Y+A S DE ALV AA L N++ + + G
Sbjct: 617 FLTLLAVCHSVVPDRPNKDDSEIIYEASSPDEAALVSAAKNLGYAFYNRDPTGCLVNIRG 676
Query: 488 SVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV--E 545
+ ++E+L LEF SDRKRMSV+ ++ G I L KGAD +LP Q+ + E
Sbjct: 677 KIERFEVLNVLEFNSDRKRMSVICRN-PQGRIILYCKGADTTVLPLLRKDQEELYSITLE 735
Query: 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVL 605
++ ++ GLRTLCLA+ +EE++YQ+W+ ++KEA+ ++ DR+ ++ +V + +E +L ++
Sbjct: 736 FLQDFAADGLRTLCLAYTYLEEEDYQQWNELYKEAAISIQDRDMKVDKVSELIERNLSLI 795
Query: 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSID 665
G TAIED+LQ+GVP+ I L KA I W+LTGDKQ TAI I SC+ ++ + + ++ ++
Sbjct: 796 GSTAIEDKLQEGVPQAIANLIKANIKIWVLTGDKQETAINIGFSCHLLTSDMR--IIILN 853
Query: 666 GKTEDEVCRSLERVL---LTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSR 721
G +++V ++ + + + A VV+G L AL+ + F ELA +
Sbjct: 854 GSNQEDVHNQIQGAIDAYFSDDAENHQNSGFALVVEGSCLNFALEGELKSVFLELAANCK 913
Query: 722 TAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
+ ICCR TP QKAQ+V++++ + TLAIGDG NDV MIQ A IG+GISG EG+QA A
Sbjct: 914 SVICCRTTPLQKAQVVKMVRDTLRAVTLAIGDGANDVSMIQAAHIGIGISGHEGMQAVMA 973
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXXXXXN 840
+DYSI +F FL RL++VHGR+ Y R + L Y FYK +
Sbjct: 974 SDYSIAQFSFLYRLLVVHGRWDYKRNSKLMLYCFYKNMVFAMTQFWFGIYNSFSAQTMFD 1033
Query: 841 SVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSL 899
S S+ +NV +T +P++V I D+D+S + ++PQ+ Q N W +
Sbjct: 1034 SWSISIFNVVFTGLPIIVCAIFDQDVSAESSQKYPQLYASGQKDSEFNLRVLWVWIVEAW 1093
Query: 900 FHAIVAFVISIHVYAYEKSEMEE---VSMVALSGCIWLQA-----FVVALETNSFTVFQH 951
H++V F +Y++ + +E + + A+ I++ F +A ET +T H
Sbjct: 1094 IHSVVIFFGVYGLYSHGSTLLESGDTLDLWAMGQNIFILVVITVNFKLAFETRYWTWITH 1153
Query: 952 LAIWGNLVAFYIINWIFSAIPSSG 975
+IW +++ ++ + +AIP G
Sbjct: 1154 FSIWASILIWFAWVAVLAAIPGIG 1177
|
|
| MGI|MGI:1330848 Atp8a1 "ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 1546 (549.3 bits), Expect = 1.1e-158, P = 1.1e-158
Identities = 376/1052 (35%), Positives = 577/1052 (54%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNVITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
I G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VYT
Sbjct: 215 ISGRIECESPNRHLYDFVGNIRL----DGHGTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +W + K WY+
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGKDWYL 330
Query: 302 -LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
L+ + L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 331 HLHYGGASNFGLNF--LTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 388
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 416
+ A + ++E+L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 389 AMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQSSQFGDEKTFNDPSL 448
Query: 417 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
L+ + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 449 LDNLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 507
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ + I G +YE+L LEFTS RKRMSVVV+ SG + L KGAD I
Sbjct: 508 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVVVRT-PSGKLRLYCKGADTVIYER 566
Query: 533 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 592
A + ++ +EQ++ GLRTLC A E+ E +++EW ++ AS+++ +R ++
Sbjct: 567 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFEEWRAVYHRASTSVQNRLLKLE 626
Query: 593 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 627 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCRL 686
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 711
+ G ++ +G D +L R T+ + D A ++DG L+ AL R+
Sbjct: 687 LKRN-MGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 744
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 770
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 745 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 804
Query: 771 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXX 830
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK
Sbjct: 805 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYKNIVLYIIEIWFAFV 864
Query: 831 XXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPS 889
+ YNV +T++P L I ++ + ++++P++ Y + L+ +
Sbjct: 865 NGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPEL--YKTSQNALDFN 922
Query: 890 TFAGWFG--RSLFHAIVAFVISIHVYAYEKSEME-EVSMVALSGCIWLQAFVV------- 939
T W LFH+++ F + Y + S L G ++ FVV
Sbjct: 923 TKVFWVHCLNGLFHSVILFWFPLKALQYGTVFGNGKTSDYLLLGN-FVYTFVVITVCLKA 981
Query: 940 ALETNSFTVFQHLAIWGNLVAFYIINWIFSAI-PSSGMYTIMF----RLCSQPSYWITMF 994
LET+ +T F H+AIWG++ + + I+S++ P+ M M L S +W+ +
Sbjct: 982 GLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMAPDMSGEAAMLFSSGVFWVGLL 1041
Query: 995 LIVAAGMGPIVALKYFRYTYRASKINILQQAE 1026
I A + V K + T + ++ +Q+ E
Sbjct: 1042 SIPVASLLLDVLYKVIKRTAFKTLVDEVQELE 1073
|
|
| UNIPROTKB|Q9Y2Q0 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 908 (324.7 bits), Expect = 1.4e-157, Sum P(2) = 1.4e-157
Identities = 230/646 (35%), Positives = 351/646 (54%)
Query: 403 YGNETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
+G+E D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 452 FGDEK--TFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 460 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 519
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKL 567
Query: 520 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
KQ TAI I SC + G ++ +G D +L R T+ + D A ++D
Sbjct: 688 KQETAINIGHSCKLLKKN-MGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIID 745
Query: 699 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGND 756
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGAND 805
Query: 757 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L+++HG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMIHGAWNYNRVSKCILYCFYK 865
Query: 817 XXXXXXXXXXXXXXXXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQ 875
+ YNV +T++P L I ++ + ++++P+
Sbjct: 866 NIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPE 925
Query: 876 ILFYCQAGRLLNPSTFAGWFG--RSLFHAIVAFVISIHVYAYEKSEME-EVSMVALSGCI 932
+ Y + L+ +T W LFH+++ F + Y + + S L G
Sbjct: 926 L--YKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGTAFGNGKTSDYLLLGN- 982
Query: 933 WLQAFVV-------ALETNSFTVFQHLAIWGNL---VAFY-IINWIFSAIPSS-GMYTIM 980
++ FVV LET+ +T F H+AIWG++ V F+ I + ++ AIP + M
Sbjct: 983 FVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAIPMAPDMSGEA 1042
Query: 981 FRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1026
L S +W+ + I A + V K + T + ++ +Q+ E
Sbjct: 1043 AMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1088
|
|
| UNIPROTKB|Q29449 ATP8A1 "Probable phospholipid-transporting ATPase IA" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 1532 (544.3 bits), Expect = 3.3e-157, P = 3.3e-157
Identities = 374/1052 (35%), Positives = 574/1052 (54%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANSFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAIKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVNVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL-IPAACMGMDFELLHK 181
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +PA D + L +
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQGLPATSDIKDIDSLMR 214
Query: 182 IKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241
+ G IEC P++ + F GN+RL PL +L+ LRNT+W G+ VYT
Sbjct: 215 LSGRIECESPNRHLYDFVGNIRL----DGRSTVPLGADQILLRGAQLRNTQWVHGIVVYT 270
Query: 242 GNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQWYV 301
G++TKL P KL+ V+ + + +W + + WY+
Sbjct: 271 GHDTKLMQNSTSPPLKLSNVERITNVQILILFCILIAMSLVCSVGSAIWNRRHSGRDWYL 330
Query: 302 -LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTP 360
L + L L F +L + +IPIS+ V+L++VK A FI+WD +M TDT
Sbjct: 331 NLNYGGANNFGLNF--LTFIILFNNLIPISLLVTLEVVKFTQAYFINWDLDMHYEPTDTA 388
Query: 361 SHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNET--GD--ALKDVGL 416
+ A + ++ +L QV+YI +DKTGTLT N M F++C I G+ YG + GD D L
Sbjct: 389 AMARTSNLNVELGQVKYIFSDKTGTLTCNVMQFKKCTIAGVAYGQNSQFGDEKTFSDSSL 448
Query: 417 LNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
L + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA QL+ V
Sbjct: 449 LENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAAKQLNFVF 507
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ + I G +YE+L LEFTS RKRMSV+V+ SG + L KGAD I
Sbjct: 508 TGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKLRLYCKGADTVIYDR 566
Query: 533 YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIA 592
A + ++ +EQ++ GLRTLC A E+ E ++QEW ++ AS+++ +R ++
Sbjct: 567 LAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYHRASTSVQNRLLKLE 626
Query: 593 EVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I SC
Sbjct: 627 ESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGDKQETAINIGHSCK- 685
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRK 711
+ + G ++ +G D +L R T+ + D A ++DG L+ AL R+
Sbjct: 686 LRRKNMGMIVINEGSL-DGTRETLSRHCTTLGDALRKENDFALIIDGKTLKYALTFGVRQ 744
Query: 712 AFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGIS 770
F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GVGIS
Sbjct: 745 YFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGANDVSMIQTAHVGVGIS 804
Query: 771 GREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXX 830
G EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK
Sbjct: 805 GNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRGSKCILYCFYKNIVLYIIEIWFAFV 864
Query: 831 XXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPS 889
+ YNV +T++P L I ++ + ++++P++ Y + L+ +
Sbjct: 865 NGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKEYMLKYPEL--YKTSQNALDFN 922
Query: 890 TFAGWFG--RSLFHAIVAFVISIHVYAYEKS-EMEEVSMVALSGCIWLQAFVV------- 939
T W LFH+++ F + Y E S L G ++ FVV
Sbjct: 923 TKVFWVHCLNGLFHSVILFWFPLKALQYGTVFENGRTSDYLLLGN-FVYTFVVITVCLKA 981
Query: 940 ALETNSFTVFQHLAIWGNLVAFYIINWIFSAI-PSSGMYTIMF----RLCSQPSYWITMF 994
LET+ +T F H+AIWG++ + + I+S++ P+ M M L S +W+ +
Sbjct: 982 GLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMAPDMSGEAAMLFSSGVFWMGLL 1041
Query: 995 LIVAAGMGPIVALKYFRYTYRASKINILQQAE 1026
I A + V K + T + ++ +Q+ E
Sbjct: 1042 FIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1073
|
|
| FB|FBgn0259221 CG42321 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 1522 (540.8 bits), Expect = 3.8e-156, P = 3.8e-156
Identities = 373/1020 (36%), Positives = 568/1020 (55%)
Query: 2 KRYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI 61
+R I +N + ++ Y NR++ KY+ ++FLP L+EQF R+ N +FLLIA LQ +
Sbjct: 216 RRIINLNGPQPTK--YGNNRITTAKYSFISFLPAFLFEQFRRYSNCFFLLIAILQQIPEV 273
Query: 62 TPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRV 121
+P +T PL+FI +VSA KE +D R+ +D + N + + + G ++ ++ V
Sbjct: 274 SPTGRYTTLVPLMFILSVSAIKEIIEDIKRHRADNEINHRSIERLDSGSWCTVRWSELTV 333
Query: 122 GNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR-LIPAACMGMDFELLH 180
G+I+ + N P DL+L+ +S+PQ +C++ETA LDGET+LK R +PA ++ + L
Sbjct: 334 GDIIKVGINTFFPADLILLSSSEPQAMCFIETANLDGETNLKIRQALPATAELLETKDLQ 393
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNT-ILQ-SCYLRNTEWACGVA 238
+++G IEC P++ + F+G LR + P + N +LQ LRNT W G+
Sbjct: 394 RLEGRIECELPNRHLYEFNGVLR------ETGKPPAALGNDQVLQRGAILRNTAWVFGIV 447
Query: 239 VYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAXXXXXXXXXXXL----GTAGNVWKDTE 294
VY+G ETKL M P + +DKLT L G W
Sbjct: 448 VYSGQETKL-MKNSTSAPLKRST---VDKLTNTQILMLFMILISLCIISGLCNLFWTREH 503
Query: 295 ARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMID 354
+ WY L +F L L F +L + +IPIS++V+L+LV+ L A FI++D EM
Sbjct: 504 SETDWY-LGLTDFKTKSLGYNLLTFFILYNNLIPISLQVTLELVRFLQAIFINYDIEMYH 562
Query: 355 PETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE-TGDALKD 413
E++TP+ A + ++E+L V+YI +DKTGTLT+N M F++C I G Y E T + +
Sbjct: 563 EESNTPAMARTSNLNEELGMVKYIFSDKTGTLTQNVMEFKKCSIAGYVYTAERTPEESQL 622
Query: 414 VGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473
V + S + FL +++VC+TVIP + + G ++Y A S DE ALV A + +
Sbjct: 623 VQNILGRHETSAVIEEFLELLSVCHTVIPERKENGNMIYHAASPDERALVEGAQKFGYIF 682
Query: 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP- 532
+ +EI G +YE+L LEFTS RKRMS++V+ + I L KGAD I
Sbjct: 683 DTRTPKYVEINALGVRKRYEVLNVLEFTSSRKRMSLIVRTPEN-KIKLFCKGADTVIYER 741
Query: 533 YAHAGQQTRT-FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRI 591
A GQ R + +E+++ GLRTLCLA ++ D YQEWS F +AS L +RE ++
Sbjct: 742 LAPQGQAFREQTLRHLEEFASDGLRTLCLAVADIRPDVYQEWSQTFDKASVALQNRESKL 801
Query: 592 AEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651
+ +E++L++LG TAIEDRLQDGVPETI +L AGI W+LTGDKQ TAI I SC
Sbjct: 802 EDAANLIENNLRLLGATAIEDRLQDGVPETIASLLDAGIYIWVLTGDKQETAINIGYSCR 861
Query: 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HYR 710
IS ++ ++ ++ D + R + ++++ +VA V+DG L+ AL R
Sbjct: 862 LISHSM--DIIILNEESLDATREVIHRHYGEFKSSSAKDANVALVIDGTTLKYALSCDLR 919
Query: 711 KAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGI 769
F +L IL R ICCRV+P QKA++VE++ +S + TLAIGDG NDV MIQKA++G+GI
Sbjct: 920 NDFQDLCILCRVVICCRVSPMQKAEVVEMVTQSTNAVTLAIGDGANDVAMIQKANVGIGI 979
Query: 770 SGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXX 829
SG EGLQAA A+DYSI +FR+L+RL+LVHG ++Y R + L YSFYK
Sbjct: 980 SGVEGLQAACASDYSIAQFRYLQRLLLVHGAWNYARISKLILYSFYKNVCLYVIELWFAV 1039
Query: 830 XXXXXXXXXXNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNP 888
++ YNV +T++P + +K + T++++P + Q +L N
Sbjct: 1040 YSGWSGQILFERWTIGLYNVLFTAMPPFAMGLFEKFCTAETMIRYPMLYKTSQNAKLFNV 1099
Query: 889 STFAGWFGRSLFHAIVAFVISIHVYAYEK--SEMEEVSMVALSGCIWLQAFV-VALE--- 942
F W +L H++ F + + Y E S+ + + + ++ V V L+
Sbjct: 1100 KVFWIWIFNALLHSVFLFWLPLAAYTKEVIWSDGKTSDYLLMGNLVYTYVIVTVCLKAGL 1159
Query: 943 -TNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFR-----LCSQPSYWITMFLI 996
TNS+T HLAIWG++V ++ I+S + + FR L S P ++ + L+
Sbjct: 1160 ITNSWTWLTHLAIWGSIVLWFGFLLIYSHVWPMFKFASNFRGMDIQLLSTPVFYFCLMLV 1219
|
|
| UNIPROTKB|F1PHG9 ATP8A1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 898 (321.2 bits), Expect = 5.5e-156, Sum P(2) = 5.5e-156
Identities = 228/646 (35%), Positives = 348/646 (53%)
Query: 403 YGNETGDALKDVGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDE 459
+G+E D LL + + P + FLT+MAVC+T +P + + I+Y+A S DE
Sbjct: 452 FGDEK--TFSDSSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDE 508
Query: 460 EALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNI 519
ALV AA QL+ V + + I G +YE+L LEFTS RKRMSV+V+ SG +
Sbjct: 509 GALVRAAKQLNFVFTGRTPDSVIIDSLGQEERYELLNVLEFTSARKRMSVIVRT-PSGKL 567
Query: 520 SLLSKGADEAILP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578
L KGAD I A + ++ +EQ++ GLRTLC A E+ E ++QEW +++
Sbjct: 568 RLYCKGADTVIYDRLAETSKYKEITLKHLEQFATEGLRTLCFAVAEISESDFQEWRAVYQ 627
Query: 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638
AS+++ +R ++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGD
Sbjct: 628 RASTSVQNRLLKLEESYELIEKNLQLLGATAIEDKLQDQVPETIETLMKADIKIWILTGD 687
Query: 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
KQ TAI I SC + G ++ +G D +L R + + D A ++D
Sbjct: 688 KQETAINIGHSCKLLRKN-MGMIVINEGSL-DATRETLGRHCTILGDALRKENDFALIID 745
Query: 699 GWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGND 756
G L+ AL R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG ND
Sbjct: 746 GKTLKYALTFGVRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVITLAIGDGAND 805
Query: 757 VRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYK 816
V MIQ A +GVGISG EGLQAA ++DYSI +F++LK L++VHG ++YNR + Y FYK
Sbjct: 806 VSMIQTAHVGVGISGNEGLQAANSSDYSIAQFKYLKNLLMVHGAWNYNRVSKCILYCFYK 865
Query: 817 XXXXXXXXXXXXXXXXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQ 875
+ YNV +T++P L I ++ + ++++P+
Sbjct: 866 NIVLYIIEIWFAFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPE 925
Query: 876 ILFYCQAGRLLNPSTFAGWFG--RSLFHAIVAFVISIHVYAYEKSEME-EVSMVALSGCI 932
+ Y + L+ +T W LFH+++ F + Y + S L G
Sbjct: 926 L--YKTSQNALDFNTKVFWVHCLNGLFHSVILFWFPLKALQYGNVFGNGKTSDYLLLGN- 982
Query: 933 WLQAFVV-------ALETNSFTVFQHLAIWGNLVAFYIINWIFSAI-PSSGMYTIMF--- 981
++ FVV LET+ +T F H+AIWG++ + + I+S++ P+ M M
Sbjct: 983 FVYTFVVITVCLKAGLETSYWTWFSHIAIWGSIALWVVFFGIYSSLWPAVPMAPDMSGEA 1042
Query: 982 -RLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAE 1026
L S +W+ + I A + V K + T + ++ +Q+ E
Sbjct: 1043 AMLFSSGVFWMGLLFIPVASLLLDVVYKVIKRTAFKTLVDEVQELE 1088
|
|
| UNIPROTKB|F1NX55 ATP8A1 "Uncharacterized protein" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 1518 (539.4 bits), Expect = 1.0e-155, P = 1.0e-155
Identities = 359/994 (36%), Positives = 556/994 (55%)
Query: 3 RYIYINDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT 62
R I+IN + ++ +C N +S KY ++ FLP+ L+ QF R N +FL IA LQ ++
Sbjct: 37 RTIFINQPQLTK--FCNNHVSTAKYNIITFLPRFLYSQFRRAANAFFLFIALLQQIPDVS 94
Query: 63 PVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVG 122
P +T PL+FI AV+A KE +D R+ +D N+K+ V++ G +++ + + VG
Sbjct: 95 PTGRYTTLVPLLFILAVAAVKEIIEDIKRHKADNAVNKKQTQVLRNGAWEIVHWEKVDVG 154
Query: 123 NIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL--IPAACMGMDFELLH 180
+IV ++ + +P D VL+ +S+PQ +CY+ET+ LDGET+LK R +P D E L
Sbjct: 155 DIVIIKGKEYIPADTVLLSSSEPQAMCYIETSNLDGETNLKIRQQGLPLTSDIKDIESLM 214
Query: 181 KIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240
++ G IEC P++ + F GN+RL + PL +L+ LRNT+W G+ VY
Sbjct: 215 RLSGRIECESPNRHLYDFVGNIRL----DGHGTVPLGSDQILLRGAQLRNTQWVHGIVVY 270
Query: 241 TGNETKLGMTRGIPEPKLTAVDAM--IDKLTGAXXXXXXXXXXXLGTAGNVWKDTEARKQ 298
TG++TKL P K++ V+ + I L +G+A VW + +
Sbjct: 271 TGHDTKLMQNSTSPPLKMSNVERITNIQILILFCILIAMSLICSIGSA--VWNRRHSERD 328
Query: 299 WYV-LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPET 357
WY+ L + L L F +L + +IPIS+ V+L++VK + A FI+WD +M T
Sbjct: 329 WYLDLNYGGASNFGLNF--LTFIILFNNLIPISLLVTLEVVKFIQAYFINWDIDMHYEPT 386
Query: 358 DTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG--NETGDA--LKD 413
DT + A + ++E+L QV+YI +DKTGTLT N M F++C + G+ YG ++ GD D
Sbjct: 387 DTAAMARTSNLNEELGQVKYIFSDKTGTLTCNVMQFKKCTVAGVAYGQGSQNGDEKMFSD 446
Query: 414 VGLLNAITSGSPD---VIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLH 470
LL + + P + FLT+MAVC+T +P + + I+Y+A S DE ALV AA L
Sbjct: 447 SSLLENLQNNHPTAPIICEFLTMMAVCHTAVPER-EGDKIIYQAASPDEGALVRAARHLR 505
Query: 471 MVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAI 530
V + + I+ G +YE+L LEFTS RKRMSV+V+ +G + L KGAD I
Sbjct: 506 FVFTGRTPDSVIIESLGHEERYELLNVLEFTSSRKRMSVIVRT-PTGKLRLYCKGADTVI 564
Query: 531 LP-YAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589
A + + ++ +EQ++ GLRTLC A E+ E +YQEW ++ AS+ + +R
Sbjct: 565 YDRLAESSKYKEITLKHLEQFATEGLRTLCFAVAEISESDYQEWLDVYHRASTAIQNRAL 624
Query: 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649
++ E + +E +L++LG TAIED+LQD VPETIETL KA I W+LTGDKQ TAI I S
Sbjct: 625 KLEESYELIEKNLQLLGATAIEDKLQDKVPETIETLMKADIKIWILTGDKQETAINIGHS 684
Query: 650 CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH- 708
C + G ++ +G D +L T+ + D A ++DG +L+ AL
Sbjct: 685 CKLLRKN-MGLIVINEGSL-DGTRETLSHHCSTLGDALRKENDFALIIDGKSLKYALTFG 742
Query: 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGV 767
R+ F +LA+ + ICCRV+P QK+++VE++K TLAIGDG NDV MIQ A +GV
Sbjct: 743 VRQYFLDLALSCKAVICCRVSPLQKSEVVEMVKKQVKVVTLAIGDGANDVSMIQTAHVGV 802
Query: 768 GISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXX 827
GISG EGLQAA ++DYSI +F++LK L+LVHG ++YNR A Y FYK
Sbjct: 803 GISGNEGLQAANSSDYSIAQFKYLKNLLLVHGAWNYNRVAKCILYCFYKNIVLYIIEIWF 862
Query: 828 XXXXXXXXXXXXNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLL 886
+ YNV +T++P L I ++ + ++++P++ Y + L
Sbjct: 863 AFVNGFSGQILFERWCIGLYNVMFTAMPPLTLGIFERSCRKENMLKYPEL--YKTSQNAL 920
Query: 887 NPSTFAGWFG--RSLFHAIVAFVISI----HVYAYEKSEMEEVSMVALSGCIWLQAFV-- 938
+ +T W LFH+ + F + H + + + ++ + ++ V
Sbjct: 921 DFNTKVFWVHCLNGLFHSFILFWFPLKALQHGTVFGNGKTSDYLLLGNTVYTFVVLTVCL 980
Query: 939 -VALETNSFTVFQHLAIWGNLVAFYIINWIFSAI 971
LET+ +T+F H+AIWG++ + + I+S++
Sbjct: 981 KAGLETSYWTLFSHIAIWGSIALWVVFFGIYSSL 1014
|
|
| MGI|MGI:1354710 Atp8a2 "ATPase, aminophospholipid transporter-like, class I, type 8A, member 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 893 (319.4 bits), Expect = 3.4e-154, Sum P(2) = 3.4e-154
Identities = 217/621 (34%), Positives = 335/621 (53%)
Query: 424 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483
+P + FLT++AVC+TV+P K I+Y+A S DE ALV A +L V + + I
Sbjct: 454 APCIQEFLTLLAVCHTVVPEKD-GDEIIYQASSPDEAALVKGAKKLGFVFTGRTPYSVII 512
Query: 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543
+ G + IL LEF+SDRKRMSV+V+ SG + L KGAD I + + ++
Sbjct: 513 EAMGQEQTFGILNVLEFSSDRKRMSVIVR-LPSGQLRLYCKGADNVI--FERLSKDSKYM 569
Query: 544 VEAV---EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600
E + E ++ GLRTLC+A+ ++ E+EY+EW +++EAS L DR R+ E + +E
Sbjct: 570 EETLCHLEYFATEGLRTLCVAYADLSENEYEEWLKVYQEASIILKDRAQRLEECYEIIEK 629
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
+L +LG TAIEDRLQ GVPETI TL KA I W+LTGDKQ TAI I SC +S
Sbjct: 630 NLLLLGATAIEDRLQAGVPETIATLLKAEIKIWVLTGDKQETAINIGYSCRLVSQNMALI 689
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAIL 719
LL D D ++ + + + DVA ++DG L+ AL R++F +LA+
Sbjct: 690 LLKEDSL--DATRAAITQHCTDLGNLLGKENDVALIIDGHTLKYALSFEVRRSFLDLALS 747
Query: 720 SRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
+ ICCRV+P QK+++V+++K TLAIGDG NDV MIQ A +GVGISG EG+QA
Sbjct: 748 CKAVICCRVSPLQKSEIVDVVKKRVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQAT 807
Query: 779 RAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXXXX 838
+DY+I +F +L++L+LVHG +SYNR Y FYK
Sbjct: 808 NNSDYAIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQIL 867
Query: 839 XNSVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGR 897
+ YNV +T++P I ++ ++ ++++ PQ+ Q N F G
Sbjct: 868 FERWCIGLYNVIFTALPPFTLGIFERSCTQESMLRFPQLYRITQNAEGFNTKVFWGHCIN 927
Query: 898 SLFHAIVAFVISIHVYAYEK--SEMEEVSMVALSGCIWLQAFVVA-----LETNSFTVFQ 950
+L H+++ F + + ++ + + + ++ V LET ++T F
Sbjct: 928 ALVHSLILFWVPMKALEHDTPVTSGHATDYLFVGNIVYTYVVVTVCLKAGLETTAWTKFS 987
Query: 951 HLAIWGN----LVAFYIINWIFSAIP-SSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIV 1005
HLA+WG+ LV F + + I+ IP + M + S +W+ +FL+ A + V
Sbjct: 988 HLAVWGSMLIWLVFFGVYSTIWPTIPIAPDMKGQATMVLSSAYFWLGLFLVPTACLIEDV 1047
Query: 1006 ALKYFRYTYRASKINILQQAE 1026
A + ++T + + + +Q+ E
Sbjct: 1048 AWRAAKHTCKKTLLEEVQELE 1068
|
|
| ZFIN|ZDB-GENE-100209-2 atp8a2 "ATPase, aminophospholipid transporter-like, class I, type 8A, member 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 889 (318.0 bits), Expect = 2.4e-153, Sum P(2) = 2.4e-153
Identities = 205/559 (36%), Positives = 306/559 (54%)
Query: 424 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483
SP + FLT+MAVC+TV+P + I+Y+A S DE ALV A L V + + I
Sbjct: 474 SPQICEFLTMMAVCHTVVPERED-NQIIYQASSPDEGALVKGAKSLGFVFTARTPHSVII 532
Query: 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543
+ G YE+L LEF+S+RKRMSV+V+ +GN+ L KGAD I + Q +
Sbjct: 533 EARGKEQTYELLNVLEFSSNRKRMSVIVRT-PTGNLRLYCKGADNVIFERLNVTSQYKEL 591
Query: 544 VEA-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602
A +EQ++ GLRTLC A+ ++EE Y EW + S+ L DR ++ E + +E +L
Sbjct: 592 TVAHLEQFATEGLRTLCFAYVDLEEGAYLEWLKEYNRISTVLKDRAQKLEECYELIEKNL 651
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL 662
+LG TAIEDRLQ GVPETI TL +A I W+LTGDKQ TAI I SC +S L+
Sbjct: 652 LLLGATAIEDRLQAGVPETIATLMRADIKIWVLTGDKQETAINIGYSCRLVSHGMS--LI 709
Query: 663 SIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSR 721
++ + D +L ++ + + ++A ++DG L+ AL R+AF +LA+ +
Sbjct: 710 IVNEDSLDATRATLTAHCSSLGDSLRKENELALIIDGQTLKYALSFEVRQAFLDLALSCK 769
Query: 722 TAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
ICCRV+P QK+++V+++K TLAIGDG NDV MIQ A +GVGISG EG+QA +
Sbjct: 770 AVICCRVSPLQKSEIVDMVKKHVKAITLAIGDGANDVGMIQTAHVGVGISGNEGMQATNS 829
Query: 781 ADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKXXXXXXXXXXXXXXXXXXXXXXXN 840
+DYSI +F +L++L+LVHG +SYNR Y FYK
Sbjct: 830 SDYSIAQFSYLEKLLLVHGAWSYNRVTKCILYCFYKNVVLYIIELWFAFVNGFSGQILFE 889
Query: 841 SVSLMAYNVFYTSIPVLVSTI-DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSL 899
+ YNV +T++P I D+ S+ +++ PQ+ Q N F G +L
Sbjct: 890 RWCIGLYNVIFTALPPFTLGIFDRPCSQQNMIRFPQLYRITQNAEGFNTKVFWGHCINAL 949
Query: 900 FHAIVAFVISIHVYAYEK--SEMEEVSMVALSGCIWLQAFVVA-----LETNSFTVFQHL 952
H+I+ F + ++ V + + ++ V +ET ++T F HL
Sbjct: 950 IHSIILFWFPLKALEHDTPFDNGNSVDYLFVGNIVYTYVVVTVCLKAGMETTAWTRFSHL 1009
Query: 953 AIWGNLVAFYIINWIFSAI 971
A+WG++V + + ++SAI
Sbjct: 1010 AVWGSMVLWMLFFAVYSAI 1028
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| P98205 | ALA2_ARATH | 3, ., 6, ., 3, ., 1 | 0.8735 | 1.0 | 0.9972 | yes | no |
| Q9Y2Q0 | AT8A1_HUMAN | 3, ., 6, ., 3, ., 1 | 0.3602 | 0.9148 | 0.8676 | yes | no |
| O94296 | YOOC_SCHPO | 3, ., 6, ., 3, ., 1 | 0.3554 | 0.9139 | 0.8020 | yes | no |
| P70704 | AT8A1_MOUSE | 3, ., 6, ., 3, ., 1 | 0.3663 | 0.9148 | 0.8790 | yes | no |
| Q29449 | AT8A1_BOVIN | 3, ., 6, ., 3, ., 1 | 0.3659 | 0.9139 | 0.8781 | yes | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1104 | |||
| TIGR01652 | 1057 | TIGR01652, ATPase-Plipid, phospholipid-translocati | 0.0 | |
| PLN03190 | 1178 | PLN03190, PLN03190, aminophospholipid translocase; | 0.0 | |
| COG0474 | 917 | COG0474, MgtA, Cation transport ATPase [Inorganic | 1e-134 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 5e-73 | |
| TIGR01657 | 1054 | TIGR01657, P-ATPase-V, P-type ATPase of unknown pu | 8e-33 | |
| TIGR01116 | 917 | TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic retic | 2e-24 | |
| TIGR01517 | 944 | TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium- | 8e-23 | |
| TIGR01522 | 884 | TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium- | 2e-18 | |
| TIGR01647 | 754 | TIGR01647, ATPase-IIIA_H, plasma-membrane proton-e | 1e-13 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 8e-12 | |
| TIGR01523 | 1053 | TIGR01523, ATPase-IID_K-Na, potassium and/or sodiu | 9e-12 | |
| TIGR01494 | 543 | TIGR01494, ATPase_P-type, ATPase, P-type (transpor | 2e-11 | |
| PRK15122 | 903 | PRK15122, PRK15122, magnesium-transporting ATPase; | 1e-10 | |
| TIGR01524 | 867 | TIGR01524, ATPase-IIIB_Mg, magnesium-translocating | 4e-10 | |
| pfam13246 | 91 | pfam13246, Hydrolase_like2, Putative hydrolase of | 8e-10 | |
| pfam00122 | 222 | pfam00122, E1-E2_ATPase, E1-E2 ATPase | 5e-08 | |
| PRK10517 | 902 | PRK10517, PRK10517, magnesium-transporting ATPase | 4e-07 | |
| TIGR01497 | 675 | TIGR01497, kdpB, K+-transporting ATPase, B subunit | 4e-06 | |
| COG2217 | 713 | COG2217, ZntA, Cation transport ATPase [Inorganic | 5e-06 | |
| pfam00702 | 187 | pfam00702, Hydrolase, haloacid dehalogenase-like h | 4e-05 | |
| TIGR01511 | 572 | TIGR01511, ATPase-IB1_Cu, copper-(or silver)-trans | 5e-05 | |
| TIGR01525 | 556 | TIGR01525, ATPase-IB_hvy, heavy metal translocatin | 8e-05 | |
| COG2216 | 681 | COG2216, KdpB, High-affinity K+ transport system, | 2e-04 | |
| PRK13582 | 205 | PRK13582, thrH, phosphoserine phosphatase; Provisi | 2e-04 | |
| pfam08282 | 254 | pfam08282, Hydrolase_3, haloacid dehalogenase-like | 2e-04 | |
| COG4087 | 152 | COG4087, COG4087, Soluble P-type ATPase [General f | 8e-04 | |
| PRK11033 | 741 | PRK11033, zntA, zinc/cadmium/mercury/lead-transpor | 0.001 | |
| TIGR00338 | 219 | TIGR00338, serB, phosphoserine phosphatase SerB | 0.001 | |
| TIGR01512 | 536 | TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb | 0.002 | |
| PRK01122 | 679 | PRK01122, PRK01122, potassium-transporting ATPase | 0.002 | |
| TIGR01106 | 997 | TIGR01106, ATPase-IIC_X-K, sodium or proton efflux | 0.004 | |
| COG0560 | 212 | COG0560, SerB, Phosphoserine phosphatase [Amino ac | 0.004 |
| >gnl|CDD|233509 TIGR01652, ATPase-Plipid, phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Score = 899 bits (2324), Expect = 0.0
Identities = 400/1066 (37%), Positives = 594/1066 (55%), Gaps = 67/1066 (6%)
Query: 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFI 76
+C+N++S KYT++ FLPKNL+EQF RF N YFL++A LQ +++P ++ PL F+
Sbjct: 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFV 60
Query: 77 FAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIK-KLIQSQDIRVGNIVWLRENDEVPC 135
V+A KEA +D R DK+ N + V++ + I +D+RVG+IV +++++ +P
Sbjct: 61 LIVTAIKEAIEDIRRRRRDKEVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPA 120
Query: 136 DLVLIGTSDPQGVCYVETAALDGETDLKTR--LIPAACMGMDFELLHKIKGVIECPGPDK 193
DL+L+ +S+P GVCYVETA LDGET+LK R L M +D + + G IEC P+
Sbjct: 121 DLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKM-LDEDDIKNFSGEIECEQPNA 179
Query: 194 DIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGI 253
+ F GN+ + PL+ N +L+ C LRNT+W GV VYTG++TKL
Sbjct: 180 SLYSFQGNMT----INGDRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQ 235
Query: 254 PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY---PQEFPWY 310
K + ++ ++ L +F V+ ++ +W D + WY+ +
Sbjct: 236 APSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAAN 295
Query: 311 ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISE 370
L F +L S +IPIS+ VSL+LVKS+ A FI+ D +M +TDTP+ + ++E
Sbjct: 296 GFFSF-LTFLILFSSLIPISLYVSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNE 354
Query: 371 DLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYG---NETGDAL-KDVGLLN-------- 418
+L QVEYI +DKTGTLT+N M F++C I G+ YG E D + + +G
Sbjct: 355 ELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKDGIRERLGSYVENENSMLV 414
Query: 419 ---AITSGSPDVIR--------------FLTVMAVCNTVIP--AKSKAGAILYKAQSQDE 459
T P ++ F +A+C+TV+P I Y+A S DE
Sbjct: 415 ESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDE 474
Query: 460 EALVHAAAQLHMVLVNK--NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSG 517
ALV AA + V + + L I+ +G +YEIL LEF SDRKRMSV+V+ G
Sbjct: 475 AALVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVR-NPDG 533
Query: 518 NISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSL 575
I LL KGAD I + Q E +E Y+ GLRTLC+A+RE+ E+EY+EW+
Sbjct: 534 RIKLLCKGADTVIFKRLSSGGNQVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNE 593
Query: 576 MFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635
+ EAS+ L DRE ++ V + +E DL +LG TAIED+LQ+GVPETIE LR+AGI W+L
Sbjct: 594 EYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEGVPETIELLRQAGIKIWVL 653
Query: 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE------ 689
TGDK TAI I SC +S + + I + D + + T+ E
Sbjct: 654 TGDKVETAINIGYSCRLLSRNME--QIVITSDSLDATRSVEAAIKFGLEGTSEEFNNLGD 711
Query: 690 PKDVAFVVDGWALEIALKHY-RKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRT 747
+VA V+DG +L AL K F +LA+ + ICCRV+PSQKA +V L+K S T
Sbjct: 712 SGNVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTT 771
Query: 748 LAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTA 807
LAIGDG NDV MIQ+AD+GVGISG+EG+QA A+D++IG+FRFL +L+LVHGR+SY R +
Sbjct: 772 LAIGDGANDVSMIQEADVGVGISGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRIS 831
Query: 808 FLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLV-STIDKDLS 866
+ Y FYK+L+ IQ ++SF +G SG +L+ ++ YNVF+T++PV+ D+D+S
Sbjct: 832 KMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNVFFTALPVISLGVFDQDVS 891
Query: 867 EGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEME-EVSM 925
+++PQ+ Q G+ + TF GW ++ ++V F + Y V
Sbjct: 892 ASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSVDD 951
Query: 926 VALSGCIWLQAFVV------ALETNSFTVFQHLAIWGNLVAFYIINWIFSAI-PSSGMYT 978
+ G I A VV ALE N + + IWG+++ + I ++S+I PS Y
Sbjct: 952 FSSVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYK 1011
Query: 979 IMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQ 1024
R+ +W+ + +IV + P K + +R +I+Q+
Sbjct: 1012 AAPRVMGTFGFWLVLLVIVLISLLPRFTYKAIQRLFRPPDYDIVQE 1057
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. Length = 1057 |
| >gnl|CDD|215623 PLN03190, PLN03190, aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Score = 612 bits (1580), Expect = 0.0
Identities = 376/1134 (33%), Positives = 587/1134 (51%), Gaps = 102/1134 (8%)
Query: 3 RYIYINDDETSQDLY--CANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACL-QLWS 59
R +Y+ND E S + + N + KY++ +FLP+NL+EQF R YFL+IA L QL
Sbjct: 71 RLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQ 130
Query: 60 LITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDI 119
L AS PL F+ V+A K+A++D+ R+ SD+ N + WV+ + + +DI
Sbjct: 131 LAVFGRGASIL-PLAFVLLVTAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDI 189
Query: 120 RVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179
RVG I+ ++ ND +PCD+VL+ TSDP GV YV+T LDGE++LKTR + E
Sbjct: 190 RVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGESNLKTRYAKQETLSKIPEK- 248
Query: 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239
KI G+I+C P+++I F N+ +D L N IL+ C L+NT WA GVAV
Sbjct: 249 EKINGLIKCEKPNRNIYGFQANME-----VDGKRLSLGPSNIILRGCELKNTAWAIGVAV 303
Query: 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEA---- 295
Y G ETK + K + ++ ++ + +F I + ++ VW
Sbjct: 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELD 363
Query: 296 ------RKQWYVLYPQEFPWY----ELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKF 345
RK + P+ + +Y E+ L ++ IMIPIS+ +S++LV+ A F
Sbjct: 364 TIPFYRRKDFSEGGPKNYNYYGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYF 423
Query: 346 IDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 405
+ D +M D +++ I+EDL Q++Y+ +DKTGTLTEN+M F+ I G+ Y +
Sbjct: 424 MIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGTLTENKMEFQCASIWGVDYSD 483
Query: 406 ET---------------GDALK-------DVGLLNAITSGS-----PDVIRFLTVMAVCN 438
G L+ D LL SG V F +A CN
Sbjct: 484 GRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543
Query: 439 TVIP------AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQY 492
T++P + + Y+ +S DE+ALV+AAA +L+ + + + I +G ++
Sbjct: 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRF 603
Query: 493 EILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQT---RTFVEAVEQ 549
+L EF SDRKRMSV++ C + + KGAD ++ R +
Sbjct: 604 NVLGLHEFDSDRKRMSVIL-GCPDKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHT 662
Query: 550 YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTA 609
YS LGLRTL + RE+ + E+++W F+ AS+ LI R + +V +E++L +LG +A
Sbjct: 663 YSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAALLRKVASNVENNLTILGASA 722
Query: 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669
IED+LQ GVPE IE+LR AGI W+LTGDKQ TAI I S ++ K + I+ ++
Sbjct: 723 IEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTN--KMTQIIINSNSK 780
Query: 670 DEVCRSLERVLLTMR--ITTSEPKD------------VAFVVDGWALEIAL-KHYRKAFT 714
+ +SLE L+ + T S VA ++DG +L L +
Sbjct: 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLF 840
Query: 715 ELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGRE 773
+LA +CCRV P QKA +V L+K+ TLAIGDG NDV MIQ AD+GVGISG+E
Sbjct: 841 QLASKCSVVLCCRVAPLQKAGIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQE 900
Query: 774 GLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGL 833
G QA A+D+++G+FRFL L+LVHG ++Y R ++ Y+FY++ + + ++ +
Sbjct: 901 GRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYNFYRNAVFVLVLFWYVLFTCF 960
Query: 834 SGTSLFNSVSLMAYNVFYTSIP-VLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFA 892
+ T+ N S + Y+V YT++P ++V +DKDLS T++++PQ+ Q N F
Sbjct: 961 TLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFW 1020
Query: 893 GWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVV------ALETNSF 946
+L+ + V F + + +AY S ++ S+ G +W A V+ A++ +
Sbjct: 1021 LTMIDTLWQSAVVFFVPL--FAYWASTIDGSSI----GDLWTLAVVILVNLHLAMDIIRW 1074
Query: 947 TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVA 1006
H AIWG++VA +I + AIP+ Y +F + S+W+ + IV A + P
Sbjct: 1075 NWITHAAIWGSIVATFICVIVIDAIPTLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFV 1134
Query: 1007 LKYFRYTYRASKINILQQAERMGGPILSLGTIEPQPRAIEKDVAPLSITQPRSR 1060
+K + + I ++AE+ G E QP +E + I +P R
Sbjct: 1135 VKVLYQYFTPCDVQIAREAEKFGTF------RESQPVEVEMN----PILEPPRR 1178
|
Length = 1178 |
| >gnl|CDD|223550 COG0474, MgtA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 430 bits (1108), Expect = e-134
Identities = 233/1027 (22%), Positives = 383/1027 (37%), Gaps = 191/1027 (18%)
Query: 7 INDDETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQ--LWSLITPV 64
++++E + L + + L K L QF L+ A L + +
Sbjct: 45 LSEEEVKRRLKKYGPNELPEEKKRSLLKKFL-RQFKDPFIILLLVAALLSAFVGDWVDAG 103
Query: 65 NPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNI 124
A ++ I A+ + + + KK + + V++ G I + ++ G+I
Sbjct: 104 VDAIVILLVVVINALLGFVQEYRAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDI 163
Query: 125 VWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKG 184
V L D VP DL L+ +SD V+ +AL GE+ + D L
Sbjct: 164 VLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEK-QALPLTKSDAPL------ 212
Query: 185 VIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNE 244
G D+D N + + + A G+ V TG E
Sbjct: 213 -----GLDRD-------------------------NMLFSGTTVVSGR-AKGIVVATGFE 241
Query: 245 TKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301
T+ G + T + ++KL + V +V+ ++ G
Sbjct: 242 TEFGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVG-------------- 287
Query: 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPS 361
L+ E L L +P + + + +L A+ + D ++
Sbjct: 288 LFRGGNGLLESF---LTALALAVAAVPEGLPAVVTIALALGAQRMAKDNAIV-------- 336
Query: 362 HATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAIT 421
+ E L V+ I +DKTGTLT+N+M ++ Y N G + D L
Sbjct: 337 --RSLNAIETLGSVDVICSDKTGTLTQNKMTVKKI------YINGGGKDIDDKDLK---- 384
Query: 422 SGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASIL 481
SP ++RFL A+CN+V P K+ Y+A E ALV A +L L + S L
Sbjct: 385 -DSPALLRFLLAAALCNSVTPEKNGW----YQAGDPTEGALVEFAEKLGFSL---DLSGL 436
Query: 482 EIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTR 541
E++ Y IL + F S+RKRMSV+VK G L KGA E IL
Sbjct: 437 EVE-------YPILAEIPFDSERKRMSVIVKT-DEGKYILFVKGAPEVILERC------- 481
Query: 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHD 601
+ +E ++ GLRTL A +E+ + + ++ +K+ D E +E D
Sbjct: 482 KSIGELEPLTEEGLRTLEEAVKELASEGLRVLAVAYKKLDRAEKDDEVDE------IESD 535
Query: 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQL 661
L LG+T IED ++ V E IE LR+AGI WM+TGD TAI IA C
Sbjct: 536 LVFLGLTGIEDPPREDVKEAIEELREAGIKVWMITGDHVETAIAIAKECG---------- 585
Query: 662 LSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA-ILS 720
I + V+DG L+ ELA ++
Sbjct: 586 -----------------------IEAEAESAL--VIDGAELDALSDE------ELAELVE 614
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780
++ RV+P QKA++VE L+ + GDG ND ++ AD+G+ + G EG AA+
Sbjct: 615 ELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAAKE 673
Query: 781 AD--YSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSG--T 836
A + L +V GR Y Y K+ ++ I L
Sbjct: 674 AADIVLLDDNFATIVLAVVEGRRVYVNIKKFILYLLSKN----VGEVLTLLIYSLFNLFF 729
Query: 837 SLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG 896
+ L+ N+ S+P L ++ E VM+ P L N F +
Sbjct: 730 LPLTPLQLLWINLLTDSLPALALGVED--PESDVMKRPPRGP---EEGLFNRKIFWRFIL 784
Query: 897 RSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWG 956
+ + F+++ +Y ++ + L F L+T +FTV + +
Sbjct: 785 IIGLLSAILFILTFLLYLL----------GFIANTLGLDLFQALLQTTAFTVLVLIQLLL 834
Query: 957 NLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRA 1016
L S L S W+ + +I+ + I ++
Sbjct: 835 TLAVRSRGRPFLS-----------SLLFSNKYLWLALLVIIILQLLIIFLPPLNLKIFQP 883
Query: 1017 SKINILQ 1023
+ +++ +
Sbjct: 884 TPLSLFE 890
|
Length = 917 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 252 bits (645), Expect = 5e-73
Identities = 135/598 (22%), Positives = 215/598 (35%), Gaps = 163/598 (27%)
Query: 72 PLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLREND 131
L+F+ V K +D R LSD+ N + V++ G K+ I ++D+ G++V ++ +
Sbjct: 6 VLVFVLLVVKQKLKAEDILRSLSDRLVNTRPATVLRNGWKE-IPAKDLVPGDVVLVKSGE 64
Query: 132 EVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGP 191
VP D VL+ G C+V+ + L GE++ + L G I
Sbjct: 65 TVPADGVLL-----SGSCFVDESNLTGESNPVLK----------TALKETQSGTITGDLV 109
Query: 192 DKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251
F G L + +T + T V V TG ET R
Sbjct: 110 FAGTYVFGGTLIV----------VVTPTGIL-------TTVGRIAVVVKTGFET-----R 147
Query: 252 GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYE 311
+ K ++ I + + + V + W ++
Sbjct: 148 TPLQSKRDRLENFI--FILFLLLLALAVFLY--LFIRGWDPN--------------SIFK 189
Query: 312 LLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISED 371
L LR ++ I++P ++ ++ + ++ + N E+
Sbjct: 190 AL---LRALIVLVIVVPPALPAAVTVALAVGDA------RLAK----KGILVRNLNALEE 236
Query: 372 LAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFL 431
L +V+Y+ +DKTGTLT+N+M + I G N V N SG P
Sbjct: 237 LGKVDYLCSDKTGTLTKNKMTLQGVYIDGGKEDNS----SSLVACDNNYLSGDP------ 286
Query: 432 TVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQ 491
E+AL+ +A + K + +
Sbjct: 287 --------------------------MEKALLKSAELV-------------GKADKGNKE 307
Query: 492 YEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 551
Y+IL+ F+S KRMSV+V+ G+ L KGA E IL + + E + +
Sbjct: 308 YKILDVFPFSSVLKRMSVIVET-PDGSDLLFVKGAPEFILERCN------NYEEKYLELA 360
Query: 552 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIE 611
+ GLR L A +E LE DL+ LG+ E
Sbjct: 361 RQGLRVLAFASKE---------------------------------LEDDLEFLGLITFE 387
Query: 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI-----SPEPKGQLLSI 664
D L+ ETIE L+ AGI M+TGD TA IA SPE K Q++
Sbjct: 388 DPLRPDAKETIEELKAAGIKVVMITGDNVLTAKAIAKELGIDVFARVSPEQKLQIVEA 445
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|233513 TIGR01657, P-ATPase-V, P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Score = 137 bits (348), Expect = 8e-33
Identities = 164/777 (21%), Positives = 268/777 (34%), Gaps = 164/777 (21%)
Query: 48 YFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRY-----LSDKKANEKE 102
Y + + LW L + + I +S+T + Y L D +
Sbjct: 177 YVFQVFSVILWLL------DEYYYYSLCIVFMSSTSISLSVYQIRKQMQRLRDMVHKPQS 230
Query: 103 VWVVKQGIKKLIQSQDIRVGNIVWLRENDE--VPCDLVLIGTSDPQGVCYVETAALDGET 160
V V++ G I S ++ G+IV + +E +PCD VL+ G C V + L GE+
Sbjct: 231 VIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGES 285
Query: 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKN 220
+P +K I G D + F+ +
Sbjct: 286 ------VPV------------LKFPIPDNGDDDED-----------LFLYETSKKHVLFG 316
Query: 221 --TILQSCYLRNTEWACGVAVYTGNET-KLGMTRGIPEPKLTAV----DAMIDKLTGAIF 273
ILQ + V TG T K + R I PK D+ L A+
Sbjct: 317 GTKILQIRPYPGDTGCLAIVVRTGFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVL 376
Query: 274 -VFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIP---- 328
+ + I+ L I LR + +I++P
Sbjct: 377 ALIGFIYTIIELIKDGR---------------------PLGKIILRSLDIITIVVPPALP 415
Query: 329 ----ISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384
I I SL +K P N A +++ DKTG
Sbjct: 416 AELSIGINNSLARLKKKGIF-------CTSPFR------INFA-----GKIDVCCFDKTG 457
Query: 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAK 444
TLTE+ + R + G+ E + + L +A C+++ +
Sbjct: 458 TLTEDGLDLR--GVQGLSGNQEFLKIVTEDSSLK--------PSITHKALATCHSLTKLE 507
Query: 445 SK-AGAILYKAQSQD-----EEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETL 498
K G L K + EE +A+ +L + + I+
Sbjct: 508 GKLVGDPLDKKMFEATGWTLEED--DESAEPTSILAVV------RTDDPPQ-ELSIIRRF 558
Query: 499 EFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTL 558
+F+S +RMSV+V + KGA E I + E ++ Y++ G R L
Sbjct: 559 QFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTREGYRVL 618
Query: 559 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGV 618
LA++E+ + Q+ + ++A +E +L LG E+ L+
Sbjct: 619 ALAYKELPKLTLQKAQDLSRDA-----------------VESNLTFLGFIVFENPLKPDT 661
Query: 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLER 678
E I+ L++A I M+TGD TA+ +A C ++P +L+ E ++
Sbjct: 662 KEVIKELKRASIRTVMITGDNPLTAVHVARECGIVNPSNT-LILAEAEPPESGKPNQIKF 720
Query: 679 V----LLTMRITTSEP-------------KDVAFVVDGWALEIALKHYRKAFTELAILSR 721
+ P + G A + H + L LS
Sbjct: 721 EVIDSIPFASTQVEIPYPLGQDSVEDLLASRYHLAMSGKAFAVLQAHSPELLLRL--LSH 778
Query: 722 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
T + R+ P QK LVELL+ DY GDG ND +++AD+G+ +S E AA
Sbjct: 779 TTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEAEASVAA 835
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. Length = 1054 |
| >gnl|CDD|233277 TIGR01116, ATPase-IIA1_Ca, sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 110 bits (276), Expect = 2e-24
Identities = 124/490 (25%), Positives = 172/490 (35%), Gaps = 114/490 (23%)
Query: 363 ATNTAISEDLAQVE------YILTDKTGTLTENRMIFRRC-------------CIGGIFY 403
A AI L VE I +DKTGTLT N+M + C+ G Y
Sbjct: 271 AKKNAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTY 330
Query: 404 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463
G +KD G + + T+ A+CN ++ + K E AL
Sbjct: 331 -APEGGVIKDDGPVAG--GQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAAL- 386
Query: 464 HAAAQLHMVLVNK---NASILEIKFNG-------SVLQ--YEILETLEFTSDRKRMSVVV 511
VLV K A+ + SV ++ L TLEF+ DRK MSV+
Sbjct: 387 -------KVLVEKMGLPATKNGVSSKRRPALGCNSVWNDKFKKLATLEFSRDRKSMSVLC 439
Query: 512 KDCHSGNISLLSKGADEAILPYAH------------AGQQTRTFVEAVEQYSQL-GLRTL 558
K S L KGA E +L + T + +++ LR L
Sbjct: 440 KP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRCL 497
Query: 559 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGV 618
LA++ D + +E DL +GV + D + V
Sbjct: 498 ALAFK----DIPDPREEDLLSDPANFE-----------AIESDLTFIGVVGMLDPPRPEV 542
Query: 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLER 678
+ IE R AGI M+TGD + TA I SP+ S G+ D
Sbjct: 543 ADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFD-------- 594
Query: 679 VLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVE 738
E+ R A + SR PS K++LVE
Sbjct: 595 ------------------------EMGPAKQRAACRSAVLFSRV------EPSHKSELVE 624
Query: 739 LLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAADYSIGKFRFLKRLILV 797
LL+ GDG ND ++KADIG+ + SG E A A+D + F + V
Sbjct: 625 LLQEQGEIVAMTGDGVNDAPALKKADIGIAMGSGTE--VAKEASDMVLADDNFATIVAAV 682
Query: 798 H-GRYSYNRT 806
GR YN
Sbjct: 683 EEGRAIYNNM 692
|
This model describes the P-type ATPase responsible for translocating calcium ions across the endoplasmic reticulum membrane of eukaryotes , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. These pumps transfer Ca2+ from the cytoplasm to the lumen of the endoplasmic reticulum. In humans and mice, at least, there are multiple isoforms of the SERCA pump with overlapping but not redundant functions. Defects in SERCA isoforms are associated with diseases in humans. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the latter of which is modelled by TIGR01522 [Transport and binding proteins, Cations and iron carrying compounds]. Length = 917 |
| >gnl|CDD|188151 TIGR01517, ATPase-IIB_Ca, plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 105 bits (263), Expect = 8e-23
Identities = 111/496 (22%), Positives = 185/496 (37%), Gaps = 128/496 (25%)
Query: 378 ILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVC 437
I +DKTGTLT+N M + IG + +L + +++ + +++
Sbjct: 381 ICSDKTGTLTQNVMSVVQGYIGEQRFNVR--------DVLRNVPKHVRNIL--VEGISLN 430
Query: 438 NTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILET 497
++ + G + S+ E AL L L+ + ++++
Sbjct: 431 SSSEEVVDRGGKRAFIG-SKTECAL------LDFGLLLLRD--YQEVRAEE----KVVKI 477
Query: 498 LEFTSDRKRMSVVVKDCHSGN-ISLLSKGADEAILP----YAHAGQQTRTFVEA------ 546
F S+RK MSVVVK HSG KGA E +L + + +
Sbjct: 478 YPFNSERKFMSVVVK--HSGGKYREFRKGASEIVLKPCRKRLDSNGEATPISDDDKDRCA 535
Query: 547 --VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604
+E + LRT+CLA+R+ +E+ L +
Sbjct: 536 DVIEPLASDALRTICLAYRDFAPEEFPRKDYP----------------------NKGLTL 573
Query: 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI 664
+GV I+D L+ GV E ++ ++AGI M+TGD +TA IA +C ++
Sbjct: 574 IGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTF--------- 624
Query: 665 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL------AI 718
G A+E K F L I
Sbjct: 625 ---------------------------------GGLAME------GKEFRSLVYEEMDPI 645
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGISGREGLQ 776
L + + R +P K LV +LK GDG ND ++ AD+G +GISG E
Sbjct: 646 LPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSMGISGTE--V 703
Query: 777 AARAADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQYSFYK-SLLICFIQIFFSFISG- 832
A A+D + F + R + + R + + F + L + + + +F+
Sbjct: 704 AKEASDIILLDDNFASIVRAVK------WGRNVYDNIRKFLQFQLTVNVVAVILTFVGSC 757
Query: 833 LSGTSLFNSVSLMAYN 848
+S TS +V L+ N
Sbjct: 758 ISSTSPLTAVQLLWVN 773
|
This model describes the P-type ATPase responsible for translocating calcium ions across the plasma membrane of eukaryotes , out of the cell. In some organisms, this type of pump may also be found in vacuolar membranes. In humans and mice, at least, there are multiple isoforms of the PMCA pump with overlapping but not redundant functions. Accordingly, there are no human diseases linked to PMCA defects, although alterations of PMCA function do elicit physiological effects. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1) which are modelled by TIGR01116 and TIGR01522. This model is well separated from those. Length = 944 |
| >gnl|CDD|130585 TIGR01522, ATPase-IIA2_Ca, golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 91.0 bits (226), Expect = 2e-18
Identities = 101/422 (23%), Positives = 158/422 (37%), Gaps = 94/422 (22%)
Query: 370 EDLAQVEYILTDKTGTLTENRMIFRRC-CIGGI------FYGNETGDALKDVGLLNAITS 422
E L V I +DKTGTLT+N M + G+ N+ G+ + D +L+ +
Sbjct: 319 ETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLHTMLNAVSLNQFGEVIVDGDVLHGFYT 378
Query: 423 GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE 482
V R L +CN +++A +L + AL+ + +
Sbjct: 379 --VAVSRILEAGNLCNNAK-FRNEADTLLGNPT---DVALIELLMKFGL----------- 421
Query: 483 IKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRT 542
+ Y + + F+S+RK M+V + KGA E +L Y
Sbjct: 422 ---DDLRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYC-------- 470
Query: 543 FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHD- 601
Y + +TL L + + D QE + AS+ L R+ E
Sbjct: 471 -----TYYQKKDGKTLTLT--QQQRDVIQE--EAAEMASAGL-----RVIAFASGPEKGQ 516
Query: 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQL 661
L LG+ I D + GV E + TL G+ M+TGD Q TA+ IA S +
Sbjct: 517 LTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ--- 573
Query: 662 LSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSR 721
S+ G+ D +D L I+ +
Sbjct: 574 -SVSGEKLDA-------------------------MDDQQLS-------------QIVPK 594
Query: 722 TAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-A 780
A+ R +P K ++V+ L+ GDG ND ++ ADIGV + G+ G A+ A
Sbjct: 595 VAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEA 653
Query: 781 AD 782
AD
Sbjct: 654 AD 655
|
This model describes the P-type ATPase responsible for translocating calcium ions across the golgi membrane of fungi and animals , and is of particular importance in the sarcoplasmic reticulum of skeletal and cardiac muscle in vertebrates. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. Length = 884 |
| >gnl|CDD|233506 TIGR01647, ATPase-IIIA_H, plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Score = 75.4 bits (186), Expect = 1e-13
Identities = 93/423 (21%), Positives = 145/423 (34%), Gaps = 139/423 (32%)
Query: 366 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
TAI E+LA ++ + +DKTGTLT N++ + N G DV L A+ S
Sbjct: 278 TAI-EELAGMDILCSDKTGTLTLNKLSIDEIL----PFFN--GFDKDDVLLYAALASREE 330
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485
D QD + ++ + E +
Sbjct: 331 D------------------------------QD---------AIDTAVLGSAKDLKEARD 351
Query: 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545
Y++LE + F KR V+D +G ++KGA + IL ++ VE
Sbjct: 352 G-----YKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVE 406
Query: 546 A-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604
V++ + G R L +A DE W
Sbjct: 407 EKVDELASRGYRALGVA----RTDEEGRWHF----------------------------- 433
Query: 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFISPEPKGQ 660
LG+ + D + ETIE R G+ M+TGD TA ++ L N + +
Sbjct: 434 LGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETARRLGLGTNIYTAD---V 490
Query: 661 LLSID--GKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718
LL D + +E DG+A
Sbjct: 491 LLKGDNRDDLPSGLGEMVED------------------ADGFA----------------- 515
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
V P K ++VE+L+ + GDG ND ++KAD+G+ ++G AA
Sbjct: 516 --------EVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAVAG--ATDAA 565
Query: 779 RAA 781
R+A
Sbjct: 566 RSA 568
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. Length = 754 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 69.4 bits (170), Expect = 8e-12
Identities = 117/451 (25%), Positives = 182/451 (40%), Gaps = 106/451 (23%)
Query: 370 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE--TGDALKDVGLLNAITSGSPDV 427
E L I +DKTGTLT+NRM + +++ N+ D +D + + S
Sbjct: 339 ETLGSTSTICSDKTGTLTQNRMT-----VAHMWFDNQIHEADTTEDQSGV-SFDKSSATW 392
Query: 428 IRFLTVMAVCN-TVIPAKSKAGAILYKAQSQD--EEAL---VHAAAQLHMVLVNKNASIL 481
+ + +CN V A + IL +A + D E AL + M + +N ++
Sbjct: 393 LALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSVMEMRERNPKVV 452
Query: 482 EIKFNGSVLQYEI-LETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA---- 536
EI FN S +Y++ + E D + + L+ KGA E IL +
Sbjct: 453 EIPFN-STNKYQLSIHENEDPRDPRHL-------------LVMKGAPERILERCSSILIH 498
Query: 537 GQQ-------TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589
G++ F A + LG R L + ++++ E + + D
Sbjct: 499 GKEQPLDEELKEAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQFDTDDVNFPTD--- 555
Query: 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649
+L +G+ ++ D + VP+ + R AGI M+TGD TA IA
Sbjct: 556 -----------NLCFVGLISMIDPPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKG 604
Query: 650 CNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE--PKDV-AFVVDGWAL---- 702
IS E ++E + + I S+ P+D A VV G L
Sbjct: 605 VGIIS----------------EGNETVEDIAARLNIPVSQVNPRDAKACVVHGSDLKDMT 648
Query: 703 -----EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAI----GDG 753
EI H TE+ + +RT +P QK +VE C R AI GDG
Sbjct: 649 SEQLDEILKYH-----TEI-VFART------SPQQKLIIVE---GCQ-RQGAIVAVTGDG 692
Query: 754 GNDVRMIQKADIGV--GISGREGLQAARAAD 782
ND ++KADIGV GI+G + + +AAD
Sbjct: 693 VNDSPALKKADIGVAMGIAGSDV--SKQAAD 721
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|130586 TIGR01523, ATPase-IID_K-Na, potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Score = 69.3 bits (169), Expect = 9e-12
Identities = 104/480 (21%), Positives = 164/480 (34%), Gaps = 120/480 (25%)
Query: 370 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKD-----VGLLNAITSGS 424
E L V I +DKTGT+T+ +MI R+ I +G + D D G ++ I S
Sbjct: 354 EALGAVNDICSDKTGTITQGKMIARQIWIPR--FGTISIDNSDDAFNPNEGNVSGIPRFS 411
Query: 425 P-----------DV----------------------IRFLTVMAVCNTVIPAKSKAGAIL 451
P D+ I+ L A+ N K A
Sbjct: 412 PYEYSHNEAADQDILKEFKDELKEIDLPEDIDMDLFIKLLETAALANIATVFKDDATD-C 470
Query: 452 YKAQSQDEEALVHAAAQ----LHMVLV----------NKNASILEIKFNGSVLQYEILET 497
+KA E +H A+ H L N +S+ + Q+E +
Sbjct: 471 WKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSLSQHNEKPGSAQFEFIAE 530
Query: 498 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP-----YAHAGQQTRTFVEA------ 546
F S+ KRM+ + +D H ++ +KGA E I+ G + +
Sbjct: 531 FPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELII 590
Query: 547 --VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKV 604
+E + GLR L A + ++ K + E DL+
Sbjct: 591 ANMESLAAEGLRVLAFASKSFDKA--DNNDDQLKNETLNR-----------ATAESDLEF 637
Query: 605 LGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSI 664
LG+ I D ++ +E +AGIN MLTGD TA IA I P
Sbjct: 638 LGLIGIYDPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAIAQEVGIIPPN-------- 689
Query: 665 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAI 724
I + + V+ G + A ++ + A+
Sbjct: 690 -------------------FIHDRDEIMDSMVMTGSQFD--------ALSDEEVDDLKAL 722
Query: 725 C---CRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781
C R P K +++E L GDG ND ++ A++G+ + G G A+ A
Sbjct: 723 CLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDA 781
|
Initially described as a calcium efflux ATPase , more recent work has shown that the S. pombe CTA3 gene is in fact a potassium ion efflux pump. This model describes the clade of fungal P-type ATPases responsible for potassium and sodium efflux. The degree to which these pumps show preference for sodium or potassium varies. This group of ATPases has been classified by phylogentic analysis as type IID. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. Length = 1053 |
| >gnl|CDD|233438 TIGR01494, ATPase_P-type, ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 2e-11
Identities = 25/109 (22%), Positives = 47/109 (43%), Gaps = 7/109 (6%)
Query: 724 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783
+ RV+P QK Q+VE L+ + GDG ND ++KAD+G+ + + AAD
Sbjct: 430 VFARVSPEQKLQIVEALQKKGHIVAMTGDGVNDAPALKKADVGIAMGAKA------AADI 483
Query: 784 SIGKFRFLK-RLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831
+ + GR ++ ++ +L++ + + I
Sbjct: 484 VLLDDDLSAIVKAVKEGRKIFSNIKSNIFWAIAYNLILIPLALLLIVII 532
|
The P-type ATPases are a large family of trans-membrane transporters acting on charged substances. The distinguishing feature of the family is the formation of a phosphorylated intermediate (aspartyl-phosphate) during the course of the reaction. Another common name for these enzymes is the E1-E2 ATPases based on the two isolable conformations: E1 (unphosphorylated) and E2 (phosphorylated). Generally, P-type ATPases consist of only a single subunit encompassing the ATPase and ion translocation pathway, however, in the case of the potassium (TIGR01497) and sodium/potassium (TIGR01106) varieties, these functions are split between two subunits. Additional small regulatory or stabilizing subunits may also exist in some forms. P-type ATPases are nearly ubiquitous in life and are found in numerous copies in higher organisms (at least 45 in Arabidopsis thaliana, for instance ). Phylogenetic analyses have revealed that the P-type ATPase subfamily is divided up into groups based on substrate specificities and this is represented in the various subfamily and equivalog models that have been made: IA (K+) TIGR01497, IB (heavy metals) TIGR01525, IIA1 (SERCA-type Ca++) TIGR01116, IIA2 (PMR1-type Ca++) TIGR01522, IIB (PMCA-type Ca++) TIGR01517, IIC (Na+/K+, H+/K+ antiporters) TIGR01106, IID (fungal-type Na+ and K+) TIGR01523, IIIA (H+) TIGR01647, IIIB (Mg++) TIGR01524, IV (phospholipid, flippase) TIGR01652 and V (unknown specificity) TIGR01657. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. Length = 543 |
| >gnl|CDD|237914 PRK15122, PRK15122, magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 65.4 bits (160), Expect = 1e-10
Identities = 70/293 (23%), Positives = 109/293 (37%), Gaps = 82/293 (27%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADE---AILPYAHAGQQTRTFVEAV 547
Y ++ L F R+R+SVVV+D G L+ KGA E A+ + G R EA
Sbjct: 438 GYRKVDELPFDFVRRRLSVVVEDAQ-GQHLLICKGAVEEMLAVATHVRDGDTVRPLDEAR 496
Query: 548 --------EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLE 599
E Y+ G R L +A RE+ E ++ A+ E
Sbjct: 497 RERLLALAEAYNADGFRVLLVATREIPGGE---------------SRAQYSTAD-----E 536
Query: 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKG 659
DL + G D ++ I LR+ G+ +LTGD I A C + EP
Sbjct: 537 RDLVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGD---NPIVTAKICREVGLEPGE 593
Query: 660 QLL--SIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 717
LL I+ + + R +E
Sbjct: 594 PLLGTEIEAMDDAALAREVE---------------------------------------- 613
Query: 718 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770
+ ++TP QK+++++ L++ + +GDG ND ++ AD VGIS
Sbjct: 614 ---ERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDAD--VGIS 661
|
Length = 903 |
| >gnl|CDD|130587 TIGR01524, ATPase-IIIB_Mg, magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 63.7 bits (155), Expect = 4e-10
Identities = 64/287 (22%), Positives = 112/287 (39%), Gaps = 82/287 (28%)
Query: 498 LEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYA----HAG------QQTRTFVEAV 547
+ F DR+R+SVVV++ + L+ KGA E +L G + ++ ++ +
Sbjct: 412 IPFDFDRRRLSVVVEN-RAEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDM 470
Query: 548 -EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 606
+ ++ G+R + +A + +L EA T D E L + G
Sbjct: 471 TAEMNRQGIRVIAVATK----------TLKVGEADFTKTD------------EEQLIIEG 508
Query: 607 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL--SI 664
D ++ E I L K GIN +LTGD + +I C + + LL I
Sbjct: 509 FLGFLDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI---CQEVGIDANDFLLGADI 565
Query: 665 DGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAI 724
+ +++E+ R L + I
Sbjct: 566 EELSDEELARELR-------------------------------------------KYHI 582
Query: 725 CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771
R+TP QK++++ LLK + +GDG ND ++KAD+G+ +
Sbjct: 583 FARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDT 629
|
This model describes the magnesium translocating P-type ATPase found in a limited number of bacterial species and best described in Salmonella typhimurium, which contains two isoforms. These transporters are active in low external Mg2+ concentrations and pump the ion into the cytoplasm. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis [Transport and binding proteins, Cations and iron carrying compounds]. Length = 867 |
| >gnl|CDD|222006 pfam13246, Hydrolase_like2, Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Score = 56.5 bits (137), Expect = 8e-10
Identities = 17/43 (39%), Positives = 21/43 (48%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 533
+Y + + F S+RKRMS V K L KGA E IL
Sbjct: 45 RYPRVAEIPFNSERKRMSTVHKLEDDDGYRLFVKGAPERILER 87
|
This is a putative hydrolase of the sodium-potassium ATPase alpha subunit. Length = 91 |
| >gnl|CDD|215733 pfam00122, E1-E2_ATPase, E1-E2 ATPase | Back alignment and domain information |
|---|
Score = 54.5 bits (132), Expect = 5e-08
Identities = 38/220 (17%), Positives = 79/220 (35%), Gaps = 66/220 (30%)
Query: 73 LIFIFAVSATKEAWDDYNRYLSDKK----ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLR 128
++ + ++A EA+ +Y + K V++ G ++ I + ++ VG+IV L+
Sbjct: 2 ILLLVLINALLEAYQEYRARKALKALKKLLPPTAATVIRDGKEEEIPADELVVGDIVLLK 61
Query: 129 ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188
D VP D +I +G V+ +AL GE+ +
Sbjct: 62 PGDRVPADGRII-----EGSLEVDESALTGESLPVEK----------------------- 93
Query: 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248
+ +T+ + + E + TG +T+LG
Sbjct: 94 ----------------------------SRGDTVFAGTVVLSGE-LKVIVTATGEDTELG 124
Query: 249 -MTRGI--PEPKLTAVDAMIDKLTG--AIFVFQIVVVIVL 283
+ R + + T + ++DKL V + +++ L
Sbjct: 125 KIARLVEEAKSAKTPLQRLLDKLAKILVPIVLALAILVFL 164
|
Length = 222 |
| >gnl|CDD|236705 PRK10517, PRK10517, magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 4e-07
Identities = 70/307 (22%), Positives = 123/307 (40%), Gaps = 89/307 (28%)
Query: 492 YEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYA----HAGQQ---TRTFV 544
++ ++ + F +R+RMSVVV + ++ + L+ KGA E IL H G+ +
Sbjct: 441 WQKIDEIPFDFERRRMSVVVAE-NTEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIML 499
Query: 545 EAVEQ----YSQLGLRTLCLAWREV--EEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598
+++ ++ GLR + +A + + E +YQ D
Sbjct: 500 RRIKRVTDTLNRQGLRVVAVATKYLPAREGDYQ------------RAD------------ 535
Query: 599 EHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 658
E DL + G A D ++ ++ L+ +G+ +LTGD + A ++ C+ + +
Sbjct: 536 ESDLILEGYIAFLDPPKETTAPALKALKASGVTVKILTGDSELVAAKV---CHEVGLDAG 592
Query: 659 GQLLS--IDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 716
L+ I+ ++DE+ E
Sbjct: 593 EVLIGSDIETLSDDELANLAE--------------------------------------- 613
Query: 717 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776
RT + R+TP K ++V LLK + +GDG ND ++ ADI GIS +
Sbjct: 614 ----RTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADI--GISVDGAVD 667
Query: 777 AAR-AAD 782
AR AAD
Sbjct: 668 IAREAAD 674
|
Length = 902 |
| >gnl|CDD|130561 TIGR01497, kdpB, K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Score = 50.7 bits (121), Expect = 4e-06
Identities = 59/227 (25%), Positives = 91/227 (40%), Gaps = 62/227 (27%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--GQQTRTFVEAVE 548
Q +EFT+ + RMS + D N ++ KGA +AI + A G +AV+
Sbjct: 365 QSLHATFVEFTA-QTRMSGINLD----NGRMIRKGAVDAIKRHVEANGGHIPTDLDQAVD 419
Query: 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVT 608
Q ++ G L VC+ D ++ GV
Sbjct: 420 QVARQGGTPLV----------------------------------VCE----DNRIYGVI 441
Query: 609 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC---NFIS---PEPK---- 658
++D ++ G+ E LRK GI M+TGD + TA IA +FI+ PE K
Sbjct: 442 YLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGVDDFIAEATPEDKIALI 501
Query: 659 ------GQLLSIDGK-TEDEVCRSLERVLLTMRITTSEPKDVAFVVD 698
G+L+++ G T D + V + M T K+ A +VD
Sbjct: 502 RQEQAEGKLVAMTGDGTNDAPALAQADVGVAMNSGTQAAKEAANMVD 548
|
This model describes the P-type ATPase subunit of the complex responsible for translocating potassium ions across biological membranes in microbes. In E. coli and other species, this complex consists of the proteins KdpA, KdpB, KdpC and KdpF. KdpB is the ATPase subunit, while KdpA is the potassium-ion translocating subunit. The function of KdpC is unclear, although cit has been suggested to couple the ATPase subunit to the ion-translocating subunit , while KdpF serves to stabilize the complex. The potassium P-type ATPases have been characterized as Type IA based on a phylogenetic analysis which places this clade closest to the heavy-metal translocating ATPases (Type IB). Others place this clade closer to the Na+/K+ antiporter type (Type IIC) based on physical characteristics. This model is very clear-cut, with a strong break between trusted hits and noise. All members of the seed alignment, from Clostridium, Anabaena and E. coli are in the characterized table. One sequence above trusted, OMNI|NTL01TA01282, is apparently mis-annotated in the primary literature, but properly annotated by TIGR [Transport and binding proteins, Cations and iron carrying compounds]. Length = 675 |
| >gnl|CDD|225127 COG2217, ZntA, Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 5e-06
Identities = 20/45 (44%), Positives = 26/45 (57%)
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
K++GV A+ D L+ E I L+ GI MLTGD + TA IA
Sbjct: 527 KLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA 571
|
Length = 713 |
| >gnl|CDD|216069 pfam00702, Hydrolase, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 4e-05
Identities = 46/232 (19%), Positives = 68/232 (29%), Gaps = 66/232 (28%)
Query: 540 TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE---WSLMFKEASSTLIDREWRIAEVCQ 596
V E + L +A + + L+ + L E +
Sbjct: 15 GEPVVPEAEALLEA-AAALGVAIVIAAGENLTKEGREELVRRLLLRALAGEELLEELLRA 73
Query: 597 RLE----HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652
DL VLG+ A+ D L G E ++ L++AGI +LTGD + TA IA
Sbjct: 74 GATVVAVLDLVVLGLIALTDPLYPGAREALKELKEAGIKLAILTGDNRLTANAIA----- 128
Query: 653 ISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKA 712
+LL + D D + L K K
Sbjct: 129 -------RLLGLF--------------------------DALVSADLYGLVGVGKPDPKI 155
Query: 713 FTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764
F +E L L +GDG ND+ + A
Sbjct: 156 F--------------------ELALEELGVKPEEVLMVGDGVNDIPAAKAAG 187
|
This family is structurally different from the alpha/beta hydrolase family (pfam00561). This family includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure of the family consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of Pseudomonas sp. (S)-2-haloacid dehalogenase 1. The rest of the fold is composed of the core alpha/beta domain. Those members with the characteristic DxD triad at the N-terminus are probably phosphatidylglycerolphosphate (PGP) phosphatases involved in cardiolipin biosynthesis in the mitochondria. Length = 187 |
| >gnl|CDD|233445 TIGR01511, ATPase-IB1_Cu, copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 46.9 bits (112), Expect = 5e-05
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
++ GV A+ D+L+ E I+ L++ GI MLTGD + TA +A
Sbjct: 404 ELAGVLALADQLKPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVA 448
|
This model describes the P-type ATPase primarily responsible for translocating copper ions accross biological membranes. These transporters are found in prokaryotes and eukaryotes. This model encompasses those species which pump copper ions out of cells or organelles (efflux pumps such as CopA of Escherichia coli ) as well as those which pump the ion into cells or organelles either for the purpose of supporting life in extremely low-copper environments (for example CopA of Enterococcus hirae ) or for the specific delivery of copper to a biological complex for which it is a necessary component (for example FixI of Bradyrhizobium japonicum, or CtaA and PacS of Synechocystis). The substrate specificity of these transporters may, to a varying degree, include silver ions (for example, CopA from Archaeoglobus fulgidus). Copper transporters from this family are well known as the genes which are mutated in two human disorders of copper metabolism, Wilson's and Menkes' diseases. The sequences contributing to the seed of this model are all experimentally characterized. The copper P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the cadmium-ATPases (TIGR01512) are well separated, and thus we further type the copper-ATPases as IB1 (and the cadmium-ATPases as IB2). Several sequences which have not been characterized experimentally fall just below the cutoffs for both of these models. A sequence from Enterococcus faecalis scores very high against this model, but yet is annotated as an "H+/K+ exchanging ATPase". BLAST of this sequence does not hit anything else annotated in this way. This error may come from the characterization paper published in 1987. Accession GP|7415611 from Saccharomyces cerevisiae appears to be mis-annotated as a cadmium resistance protein. Accession OMNI|NTL01HS00542 from Halobacterium which scores above trusted for this model is annotated as "molybdenum-binding protein" although no evidence can be found for this classification [Cellular processes, Detoxification, Transport and binding proteins, Cations and iron carrying compounds]. Length = 572 |
| >gnl|CDD|233447 TIGR01525, ATPase-IB_hvy, heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 46.1 bits (110), Expect = 8e-05
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIA 647
++LGV A+ D+L+ E I L++AG I MLTGD ++ A +A
Sbjct: 374 ELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVA 419
|
This model encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. Length = 556 |
| >gnl|CDD|225126 COG2216, KdpB, High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 2e-04
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ ++LGV ++D ++ G+ E LRK GI M+TGD TA IA
Sbjct: 434 ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 481
|
Length = 681 |
| >gnl|CDD|237437 PRK13582, thrH, phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 2e-04
Identities = 18/38 (47%), Positives = 23/38 (60%)
Query: 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767
P K Q V+ LKS YR +A GD ND M+ +AD G+
Sbjct: 130 PDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGI 167
|
Length = 205 |
| >gnl|CDD|219777 pfam08282, Hydrolase_3, haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 2e-04
Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 25/180 (13%)
Query: 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRS 675
+ V E IE L++ ++ + T D E + +
Sbjct: 82 EDVKEIIEYLKENNLSILLYTDDG--------AYILNDVSEKIVREERYVKSFVLVIDDF 133
Query: 676 LERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTA-ICCRVTP--SQ 732
+ + + V D L+ K ++ F L ++ + + P
Sbjct: 134 EL-------LEDEDINKILIVTDPEDLDELEKELKELFGSLITITSSGPGYLEIMPKGVS 186
Query: 733 KA----QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAADYSIGK 787
K L + L +A GDG ND+ M++ A +GV + + ++A AADY G
Sbjct: 187 KGTALKALAKHLGIDLEEVIAFGDGENDIEMLELAGLGVAMGNASPEVKA--AADYVTGS 244
|
This family contains haloacid dehalogenase-like hydrolase enzymes. Length = 254 |
| >gnl|CDD|226572 COG4087, COG4087, Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Score = 41.0 bits (96), Expect = 8e-04
Identities = 16/58 (27%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL--QAARAADYSI 785
P KA+++ LK + + +G+G ND+ +++AD+G+ +EG+ + AD +
Sbjct: 79 PEMKAKIIRELKKRYEKVVMVGNGANDILALREADLGICTIQQEGVPERLLLTADVVL 136
|
Length = 152 |
| >gnl|CDD|236827 PRK11033, zntA, zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Score = 42.7 bits (101), Expect = 0.001
Identities = 18/48 (37%), Positives = 25/48 (52%)
Query: 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ VLG+ A++D L+ + I L+ GI MLTGD A IA
Sbjct: 555 RNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIA 602
|
Length = 741 |
| >gnl|CDD|232927 TIGR00338, serB, phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.001
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 2/41 (4%)
Query: 747 TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787
T+A+GDG ND+ MI+ A +G+ + + LQ + AD I K
Sbjct: 171 TVAVGDGANDLSMIKAAGLGIAFNAKPKLQ--QKADICINK 209
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins [Amino acid biosynthesis, Serine family]. Length = 219 |
| >gnl|CDD|211664 TIGR01512, ATPase-IB2_Cd, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Score = 42.3 bits (100), Expect = 0.002
Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIA 647
D LG + D + E I L+ GI MLTGD++ A ++A
Sbjct: 350 DGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVA 397
|
This model describes the P-type ATPase primarily responsible for translocating cadmium ions (and other closely-related divalent heavy metals such as cobalt, mercury, lead and zinc) across biological membranes. These transporters are found in prokaryotes and plants. Experimentally characterized members of the seed alignment include: SP|P37617 from E. coli, SP|Q10866 from Mycobacterium tuberculosis and SP|Q59998 from Synechocystis PCC6803. The cadmium P-type ATPases have been characterized as Type IB based on a phylogenetic analysis which combines the copper-translocating ATPases with the cadmium-translocating species. This model and that describing the copper-ATPases (TIGR01511) are well separated, and thus we further type the copper-ATPases as IB1 and the cadmium-ATPases as IB2. Several sequences which have not been characterized experimentally fall just below trusted cutoff for both of these models (SP|Q9CCL1 from Mycobacterium leprae, GP|13816263 from Sulfolobus solfataricus, OMNI|NTL01CJ01098 from Campylobacter jejuni, OMNI|NTL01HS01687 from Halobacterium sp., GP|6899169 from Ureaplasma urealyticum and OMNI|HP1503 from Helicobacter pylori) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 536 |
| >gnl|CDD|234905 PRK01122, PRK01122, potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Score = 42.1 bits (100), Expect = 0.002
Identities = 39/154 (25%), Positives = 59/154 (38%), Gaps = 46/154 (29%)
Query: 496 ETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY--AHAGQQTRTFVEAVEQYSQL 553
+ F++ + RMS V D + KGA +AI Y ++ G AV++ ++
Sbjct: 370 TFVPFSA-QTRMSGVDLDGRE-----IRKGAVDAIRRYVESNGGHFPAELDAAVDEVARK 423
Query: 554 GLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDR 613
G L +A D +VLGV ++D
Sbjct: 424 GGTPLVVA--------------------------------------EDNRVLGVIYLKDI 445
Query: 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
++ G+ E LRK GI M+TGD TA IA
Sbjct: 446 VKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA 479
|
Length = 679 |
| >gnl|CDD|130176 TIGR01106, ATPase-IIC_X-K, sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.004
Identities = 21/72 (29%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 94 SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVET 153
S K ++ V++ G K I ++ + VG++V ++ D +P DL +I C V+
Sbjct: 134 SFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDN 189
Query: 154 AALDGETDLKTR 165
++L GE++ +TR
Sbjct: 190 SSLTGESEPQTR 201
|
This model describes the P-type ATPases responsible for the exchange of either protons or sodium ions for potassium ions across the plasma membranes of eukaryotes. Unlike most other P-type ATPases, members of this subfamily require a beta subunit for activity. This model encompasses eukaryotes and consists of two functional types, a Na/K antiporter found widely distributed in eukaryotes and a H/K antiporter found only in vertebrates. The Na+ or H+/K+ antiporter P-type ATPases have been characterized as Type IIC based on a published phylogenetic analysis. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps [Energy metabolism, ATP-proton motive force interconversion]. Length = 997 |
| >gnl|CDD|223634 COG0560, SerB, Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Score = 39.6 bits (93), Expect = 0.004
Identities = 15/66 (22%), Positives = 27/66 (40%), Gaps = 3/66 (4%)
Query: 733 KAQLVELLKSCDY---RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789
L EL T+A GD ND+ M++ A + + ++ + L+A R
Sbjct: 146 AKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPIAVNPKPKLRALADVRIWPIDLR 205
Query: 790 FLKRLI 795
+ L+
Sbjct: 206 AVLYLL 211
|
Length = 212 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1104 | |||
| KOG0206 | 1151 | consensus P-type ATPase [General function predicti | 100.0 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 100.0 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 100.0 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 100.0 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 100.0 | |
| KOG0204 | 1034 | consensus Calcium transporting ATPase [Inorganic i | 100.0 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 100.0 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 100.0 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 100.0 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 100.0 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 100.0 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 100.0 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 100.0 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 100.0 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 100.0 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 100.0 | |
| KOG0208 | 1140 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 100.0 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 100.0 | |
| KOG0209 | 1160 | consensus P-type ATPase [Inorganic ion transport a | 100.0 | |
| KOG0205 | 942 | consensus Plasma membrane H+-transporting ATPase [ | 100.0 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 100.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 100.0 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 100.0 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 100.0 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 100.0 | |
| KOG0207 | 951 | consensus Cation transport ATPase [Inorganic ion t | 100.0 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 100.0 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 100.0 | |
| COG2216 | 681 | KdpB High-affinity K+ transport system, ATPase cha | 100.0 | |
| PF00122 | 230 | E1-E2_ATPase: E1-E2 ATPase p-type cation-transport | 99.96 | |
| PF00702 | 215 | Hydrolase: haloacid dehalogenase-like hydrolase; I | 99.86 | |
| PF13246 | 91 | Hydrolase_like2: Putative hydrolase of sodium-pota | 99.5 | |
| COG4087 | 152 | Soluble P-type ATPase [General function prediction | 99.46 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.19 | |
| PF00689 | 182 | Cation_ATPase_C: Cation transporting ATPase, C-ter | 99.18 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.17 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.1 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.1 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.05 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.05 | |
| KOG4383 | 1354 | consensus Uncharacterized conserved protein [Funct | 99.04 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 98.98 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 98.96 | |
| PLN02887 | 580 | hydrolase family protein | 98.95 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 98.93 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.86 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 98.85 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 98.74 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 98.68 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.65 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.61 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.58 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 98.53 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.51 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 98.45 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 98.45 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 98.41 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.38 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 98.38 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 98.37 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 98.33 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 98.31 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.28 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 98.27 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 98.26 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 98.13 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 98.09 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 98.08 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 98.06 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 97.92 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 97.89 | |
| PLN02954 | 224 | phosphoserine phosphatase | 97.89 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 97.89 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 97.85 | |
| PRK08238 | 479 | hypothetical protein; Validated | 97.83 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 97.66 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 97.65 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.6 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 97.57 | |
| COG0546 | 220 | Gph Predicted phosphatases [General function predi | 97.56 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 97.53 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 97.49 | |
| PLN02423 | 245 | phosphomannomutase | 97.47 | |
| TIGR01454 | 205 | AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthes | 97.44 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 97.41 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 97.34 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 97.32 | |
| TIGR01449 | 213 | PGP_bact 2-phosphoglycolate phosphatase, prokaryot | 97.29 | |
| PLN02580 | 384 | trehalose-phosphatase | 97.25 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 97.09 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 97.03 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 96.97 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 96.97 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 96.91 | |
| smart00831 | 64 | Cation_ATPase_N Cation transporter/ATPase, N-termi | 96.87 | |
| TIGR01545 | 210 | YfhB_g-proteo haloacid dehalogenase superfamily, s | 96.78 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 96.7 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 96.65 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 96.62 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 96.6 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 96.52 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 96.52 | |
| PF00690 | 69 | Cation_ATPase_N: Cation transporter/ATPase, N-term | 96.51 | |
| TIGR03351 | 220 | PhnX-like phosphonatase-like hydrolase. This clade | 96.5 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 96.49 | |
| PLN03017 | 366 | trehalose-phosphatase | 96.33 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 96.29 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 96.22 | |
| TIGR01544 | 277 | HAD-SF-IE haloacid dehalogenase superfamily, subfa | 96.12 | |
| TIGR01548 | 197 | HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, | 96.08 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 96.03 | |
| PRK06698 | 459 | bifunctional 5'-methylthioadenosine/S-adenosylhomo | 96.01 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 95.98 | |
| COG4030 | 315 | Uncharacterized protein conserved in archaea [Func | 95.9 | |
| PRK06769 | 173 | hypothetical protein; Validated | 95.8 | |
| PLN02811 | 220 | hydrolase | 95.54 | |
| TIGR01428 | 198 | HAD_type_II 2-haloalkanoic acid dehalogenase, type | 95.51 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 95.5 | |
| PRK14988 | 224 | GMP/IMP nucleotidase; Provisional | 95.48 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 95.36 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 95.35 | |
| PLN02940 | 382 | riboflavin kinase | 95.33 | |
| PF13419 | 176 | HAD_2: Haloacid dehalogenase-like hydrolase; PDB: | 95.33 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 95.32 | |
| PRK09449 | 224 | dUMP phosphatase; Provisional | 95.28 | |
| PLN02779 | 286 | haloacid dehalogenase-like hydrolase family protei | 95.22 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 95.21 | |
| TIGR02009 | 185 | PGMB-YQAB-SF beta-phosphoglucomutase family hydrol | 94.9 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 94.74 | |
| PLN02151 | 354 | trehalose-phosphatase | 94.6 | |
| TIGR01509 | 183 | HAD-SF-IA-v3 haloacid dehalogenase superfamily, su | 94.46 | |
| TIGR02254 | 224 | YjjG/YfnB HAD superfamily (subfamily IA) hydrolase | 94.43 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 94.22 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.87 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 93.73 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 93.61 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.58 | |
| PF06888 | 234 | Put_Phosphatase: Putative Phosphatase; InterPro: I | 93.34 | |
| TIGR02252 | 203 | DREG-2 REG-2-like, HAD superfamily (subfamily IA) | 93.34 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 93.23 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 92.9 | |
| TIGR01549 | 154 | HAD-SF-IA-v1 haloacid dehalogenase superfamily, su | 92.56 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 92.47 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 92.26 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 92.06 | |
| PRK10563 | 221 | 6-phosphogluconate phosphatase; Provisional | 91.69 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 91.35 | |
| TIGR01691 | 220 | enolase-ppase 2,3-diketo-5-methylthio-1-phosphopen | 90.89 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 90.2 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 89.85 | |
| TIGR02247 | 211 | HAD-1A3-hyp Epoxide hydrolase N-terminal domain-li | 89.29 | |
| KOG3120 | 256 | consensus Predicted haloacid dehalogenase-like hyd | 88.89 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 88.8 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 88.53 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 88.41 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 87.92 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 87.86 | |
| PRK09456 | 199 | ?-D-glucose-1-phosphatase; Provisional | 87.2 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 87.01 | |
| PHA02597 | 197 | 30.2 hypothetical protein; Provisional | 86.23 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 85.27 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 85.01 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 82.59 | |
| PLN02177 | 497 | glycerol-3-phosphate acyltransferase | 81.81 | |
| PRK10725 | 188 | fructose-1-P/6-phosphogluconate phosphatase; Provi | 80.57 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 80.16 |
| >KOG0206 consensus P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-181 Score=1641.14 Aligned_cols=1015 Identities=40% Similarity=0.705 Sum_probs=909.9
Q ss_pred ccEEEeCCCc---ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHH
Q 001304 2 KRYIYINDDE---TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFA 78 (1104)
Q Consensus 2 ~r~i~~n~~~---~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~ 78 (1104)
+|.+|.|++. .+..+|+.|+|+|+|||+++|||++|||||+|++|+|||++++++++| ++|.+++++++|+++|+.
T Consensus 14 ~R~~~~n~~~~~~~~~~~~~~N~i~TtKYt~~tFlPk~l~eQf~r~aN~yFl~~~il~~ip-~~~~~~~~~~~pl~~vl~ 92 (1151)
T KOG0206|consen 14 SRVVYCNDPLPFEAPQRKYCDNRISTTKYTLFTFLPKNLFEQFHRVANLYFLFIAILQFIP-LSPFNPYTTLVPLLFVLG 92 (1151)
T ss_pred ceEEeCCCCCcchhhhccccCCeeEEEeccchhhhHHHHHHHHHHHHHHHHHHHHHHHcCc-ccccCccceeeceeeeeh
Confidence 6999999973 345699999999999999999999999999999999999999999999 889999999999999999
Q ss_pred HHHHHHHHHHHHHhhhhHhhcceEEEEEECCe-EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCC
Q 001304 79 VSATKEAWDDYNRYLSDKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALD 157 (1104)
Q Consensus 79 i~~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~-~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~Lt 157 (1104)
++++|+++||++|+++|+++|+++++|++++. +++..|++|+|||+|++..+|.+|||.+||+|++++|.|||+|++||
T Consensus 93 ~t~iKd~~eD~rR~~~D~~iN~~~~~v~~~~~~~~~~~wk~~~vGd~v~v~~~~~~paD~llLsss~~~~~cyveT~nLD 172 (1151)
T KOG0206|consen 93 ITAIKDAIEDYRRHKQDKEVNNRKVEVLRGDGCFVEKKWKDVRVGDIVRVEKDEFVPADLLLLSSSDEDGICYVETANLD 172 (1151)
T ss_pred HHHHHHHHhhhhhhhccHHhhcceeEEecCCceeeeeccceeeeeeEEEeccCCccccceEEecCCCCCceeEEEEeecC
Confidence 99999999999999999999999999999644 89999999999999999999999999999999999999999999999
Q ss_pred CCCCceEeeccccccCC-CHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEE
Q 001304 158 GETDLKTRLIPAACMGM-DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACG 236 (1104)
Q Consensus 158 GEs~~~~K~~~~~~~~~-~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~g 236 (1104)
||+++|.|++...+... +.+.+.++++.++||.|+.++|.|+|++.+.+ ...|++.+|+++|||.++||+|++|
T Consensus 173 GEtnLK~k~~l~~~~~~~~~~~~~~~~~~i~cE~p~~~ly~f~g~l~~~~-----~~~pl~~~~~Llrg~~lrNT~~v~G 247 (1151)
T KOG0206|consen 173 GETNLKVKQALECTSKLDSEDSLKNFKGWIECEDPNANLYTFVGNLELQG-----QIYPLSPDNLLLRGSRLRNTEWVYG 247 (1151)
T ss_pred CccccceeeehhhhhcccccccccccCCceEEcCCcccHhhhhhheeecc-----CCCCCcHHHcccCCceeccCcEEEE
Confidence 99999999997666554 34458889999999999999999999998532 2229999999999999999999999
Q ss_pred EEEEecCccccccccCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccc---cceeeccCCCcchhhhh
Q 001304 237 VAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEAR---KQWYVLYPQEFPWYELL 313 (1104)
Q Consensus 237 vVv~tG~~T~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 313 (1104)
+|++||++||+|+|...++.|++++++.+|+.+..+++++++++++..+...+|...+.. ..||+.... +....+
T Consensus 248 ~vv~tG~dtK~~~n~~~~~~Krs~ier~~n~~i~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 325 (1151)
T KOG0206|consen 248 VVVFTGHDTKLMQNSGKPPSKRSRIERKMNKIIILLFVLLILMCLISAIGFAIWTRQDGRHNGEWWYLSPSE--AAYAGF 325 (1151)
T ss_pred EEEEcCCcchHHHhcCCCccccchhhhhhhhhHHHHHHHHHHHHHHHHhhhheeeeecccccCchhhhcCch--HHHHHH
Confidence 999999999999999999999999999999999999999999999888877677653322 345654322 344566
Q ss_pred hhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEE
Q 001304 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (1104)
Q Consensus 314 ~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 393 (1104)
..+++++++++.+||+||+|++++.+..|+.||+||.+||+++++.|+.+|++++.|+||||+||++|||||||+|.|+|
T Consensus 326 ~~f~t~~il~~~liPISLyvsiEiik~~qs~fi~~D~~my~~e~d~~~~~rtsnl~eeLGqv~yIfSDKTGTLT~N~M~F 405 (1151)
T KOG0206|consen 326 VHFLTFIILYQYLIPISLYVSIEIVKVLQSIFINNDLDMYDEETDTPAQARTSNLNEELGQVEYIFSDKTGTLTQNSMEF 405 (1151)
T ss_pred HHHHHHHhhhhceEEEEEEEEeeehHHHHHHHcchHHHhhhccCCCccccccCCchhhhcceeEEEEcCcCccccceeee
Confidence 77788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecEEecCCCCc---------------------CCCchhhhhhhcc---CCchHHHHHHHHhhhcccccccCCCC-
Q 001304 394 RRCCIGGIFYGNETGD---------------------ALKDVGLLNAITS---GSPDVIRFLTVMAVCNTVIPAKSKAG- 448 (1104)
Q Consensus 394 ~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~---~~~~~~~~~~~lalc~~~~~~~~~~~- 448 (1104)
++|+++|..|+....+ ...++.+.+.... ..+...+|++++|+||++.++.++++
T Consensus 406 ~kCsi~g~~yg~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~f~~~la~chtv~~e~~~~~~ 485 (1151)
T KOG0206|consen 406 KKCSINGTSYGRNVTEVEAALAKRSGGDVNEHKIKGFTFEDSRLVDGLWSSEPQAEDILEFFRALALCHTVIPEKDEDSG 485 (1151)
T ss_pred ecccccCcccccCCChhhcccCccccccccccccccceeccchhhccccccccCcchHHHHhhHHhccceeeeccCCCcc
Confidence 9999999999865322 1112222222222 34567799999999999999985444
Q ss_pred ceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHH
Q 001304 449 AILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADE 528 (1104)
Q Consensus 449 ~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e 528 (1104)
.+.|+++||||.||+++|+++|+.+..|+++.+.+...+..++|++|+++||+|.|||||||||.| +|++.+||||||+
T Consensus 486 ~~~Y~A~SPDE~AlV~aAr~~gf~f~~Rt~~~vti~~~g~~~~y~lL~iLeF~S~RKRMSVIVR~p-~g~i~LycKGADs 564 (1151)
T KOG0206|consen 486 KLSYEAESPDEAALVEAARELGFVFLGRTPDSVTIRELGVEETYELLNVLEFNSTRKRMSVIVRDP-DGRILLYCKGADS 564 (1151)
T ss_pred ceeeecCCCcHHHHHHHHHhcCceeeeccCceEEEeccccceeEEEEEEeccccccceeEEEEEcC-CCcEEEEEcCcch
Confidence 899999999999999999999999999999999999877788999999999999999999999998 6899999999999
Q ss_pred hhhhhhccCCc--hhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEE
Q 001304 529 AILPYAHAGQQ--TRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 606 (1104)
Q Consensus 529 ~i~~~~~~~~~--~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG 606 (1104)
+|++++..++. .+...+|+++||.+||||||+|||+++++||++|.++|.+|+.+++||++.++++++.+|+||+++|
T Consensus 565 vI~erL~~~~~~~~e~T~~Hl~~yA~eGLRTLc~A~r~l~e~eY~~w~~~~~~A~ts~~~Re~~L~e~ae~iEk~L~LLG 644 (1151)
T KOG0206|consen 565 VIFERLSKNGEKLREKTQEHLEEYATEGLRTLCLAYRELDEEEYEEWNERYNEAKTSLTDREELLDEVAEEIEKDLILLG 644 (1151)
T ss_pred hhHhhhhhcchHHHHHHHHHHHHHHhhhhhHhhhhhhccCHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHhcchhhc
Confidence 99999986432 4678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH------HHHH---HHHH
Q 001304 607 VTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------DEVC---RSLE 677 (1104)
Q Consensus 607 ~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~------~~~~---~~~~ 677 (1104)
.+||||+||+||||+|+.|++||||+||+|||+.|||++||.+|+++.++++ .+.++..+. +... +.+.
T Consensus 645 ATAIEDkLQdgVPetI~~L~~AGIKIWVLTGDK~ETAiNIg~sC~Ll~~~m~--~i~i~~~~~~~~~~~~~~~~~~~~l~ 722 (1151)
T KOG0206|consen 645 ATAIEDKLQDGVPETIAKLAQAGIKIWVLTGDKQETAINIGYSCRLLRQDMK--LIIINTETSEELSSLDATAALKETLL 722 (1151)
T ss_pred ceeeechhccCchHHHHHHHHcCCEEEEEcCcHHHHHHHHHHhhcCCCCCce--EEEEecCChhhhcchhhHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999987 555554332 1111 1111
Q ss_pred ----HHHHHccccCCCCCceEEEEcchhHHHHHHH-HHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cCCeEEEEc
Q 001304 678 ----RVLLTMRITTSEPKDVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIG 751 (1104)
Q Consensus 678 ----~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~-~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~~~v~~iG 751 (1104)
+........... +..++|+||+++.++++. .+..|.+++..|++++|||++|.||+.+|+.+++ .+.+++|||
T Consensus 723 ~~~~~~~~~~~~~~~~-~~~aLVIDGktl~~aL~~~~~~~Fl~la~~C~sViCCR~sPlQKA~Vv~lVk~~~~~~TLAIG 801 (1151)
T KOG0206|consen 723 RKFTEELEEAKLEHSE-KPFALVIDGKTLAYALEDELRKKFLELAKRCKSVICCRVSPLQKALVVKLVKKGLKAVTLAIG 801 (1151)
T ss_pred HhhhHHHHHHhhccCc-CCceEEEECHHHHhhhCchhhHHHHHHHHhcCEEEEccCCHHHHHHHHHHHHhcCCceEEEee
Confidence 111111111112 479999999999999986 6679999999999999999999999999999985 688999999
Q ss_pred CCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhh
Q 001304 752 DGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFIS 831 (1104)
Q Consensus 752 DG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~ 831 (1104)
||+||++|+|+||||||++|.||.||+++|||.+.+|++|.+|+|+||||+|.|+++++.|+||||+.+++++|||++++
T Consensus 802 DGANDVsMIQ~AhVGVGIsG~EGmQAvmsSD~AIaqFrfL~rLLLVHGhW~Y~R~a~~ilyfFYKNi~f~~~~fwy~f~~ 881 (1151)
T KOG0206|consen 802 DGANDVSMIQEAHVGVGISGQEGMQAVMSSDFAIAQFRFLERLLLVHGHWSYIRLAKMILYFFYKNIAFTFTLFWYQFFN 881 (1151)
T ss_pred CCCccchheeeCCcCeeeccchhhhhhhcccchHHHHHHHhhhheeecceeHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhhh-hhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhh
Q 001304 832 GLSGTSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISI 910 (1104)
Q Consensus 832 ~~~g~~~~~~~~ll~~nl~~~~lp~~-~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 910 (1104)
+|+|+++|++|++.+||++||++|++ +++||+|++++.+|++|++|+.++++..++++.|+.|++.|+||++++|++++
T Consensus 882 gfSgq~~yd~~~l~lyNv~FTSlPvi~lGvfdqDvsa~~~l~~P~LY~~g~~~~~f~~~~f~~~~~~g~~~sli~Ff~~~ 961 (1151)
T KOG0206|consen 882 GFSGQTLYDDWYLSLYNVLFTSLPVIVLGVFDQDVSAETLLRFPELYQRGQLNLLFNWKRFWGWMLDGFYQSLVIFFLPY 961 (1151)
T ss_pred CCCCCccccceEEEEEeEEeecCchhheeecccCCCHHHHhhCCcchhhhhhccccchHHHHHHHHHHHHhheeeeeeeH
Confidence 99999999999999999999999999 78999999999999999999999999999999999999999999999999998
Q ss_pred heeecc-------cccceeeeehhhhHHHHHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHHHhh-cC----CchhHH
Q 001304 911 HVYAYE-------KSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSA-IP----SSGMYT 978 (1104)
Q Consensus 911 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~-vp----~~~~~~ 978 (1104)
..+... ..+..++++..++..++.+.+.+.+++++|+|++++.+|+|++++|++.+++.. .| ..++++
T Consensus 962 ~~~~~~~~~~~G~~~d~~~~G~~~~T~~Vivv~~~iaL~~~ywT~i~~i~i~gSi~~~f~f~~iy~~~~~~~~~~~~~~~ 1041 (1151)
T KOG0206|consen 962 LVFEEQAVTSNGLTADYWTLGTTVFTIIVIVVNLKIALETSYWTWINHIVIWGSILLWFVFLFIYSELTPAISTPDPFYG 1041 (1151)
T ss_pred hhheeeeeccCCCcCChhhccceEEEEEEEEEEeeeeeeehheeHHHHHHHHHHHHHHHHHHHHHhccccccCCCccHHH
Confidence 887531 123456666677777777777788999999999999999999999999888864 22 245778
Q ss_pred HHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHh
Q 001304 979 IMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAERM 1028 (1104)
Q Consensus 979 ~~~~~~~~~~~w~~ill~~~~~llp~~i~k~~~~~~~p~~~~~~~e~~~~ 1028 (1104)
.+.+++++|.||+++++++++|++|++++|.+++.++|++.+++|+.++.
T Consensus 1042 ~~~~~~~~p~fWl~~ll~~v~~Llp~~~~~~l~~~~~Pt~~~~i~~~~~~ 1091 (1151)
T KOG0206|consen 1042 VAEHLLSSPSFWLTLLLTVVAALLPDFVYKSLQRTFFPTDHDIIQEIEKY 1091 (1151)
T ss_pred HHHHHhcCchHHHHHHHHHHHHHhHHHHHHHHHHhhCCcHHHHHHHHHhc
Confidence 88899999999999999999999999999999999999999999999863
|
|
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-175 Score=1647.39 Aligned_cols=1020 Identities=34% Similarity=0.585 Sum_probs=897.3
Q ss_pred ccEEEeCCCcc--cccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHH
Q 001304 2 KRYIYINDDET--SQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAV 79 (1104)
Q Consensus 2 ~r~i~~n~~~~--~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i 79 (1104)
.|.||+|+++. .+.+|++|+++|+|||+|+|||++||+||++++|+|||+++++|++|.+++.++.++++||++++++
T Consensus 70 ~r~i~~~~~~~~~~~~~f~~N~i~TsKYt~~tFlP~~L~eQF~r~aN~YFL~I~ilq~ip~~s~~~~~t~~~PL~~vl~v 149 (1178)
T PLN03190 70 ARLVYLNDPEKSNERFEFAGNSIRTAKYSVFSFLPRNLFEQFHRVAYIYFLVIAVLNQLPQLAVFGRGASILPLAFVLLV 149 (1178)
T ss_pred ceEEEcCCCCcccccccCCCCeeeccccccHHHHHHHHHHHHHhhhhHHHHHHHHHHhCCCcccCCcchHHHHHHHHHHH
Confidence 59999999742 2347999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCC
Q 001304 80 SATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1104)
Q Consensus 80 ~~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGE 159 (1104)
+++++++||++|+++|++.|+++++|+|+|++++++|++|+|||||+|++||.||||++||+|++++|.|+|||++||||
T Consensus 150 ~~ike~~Ed~~r~k~d~~~N~~~~~v~~~~~~~~i~~~~i~vGDiv~v~~ge~iPaD~~ll~Ss~~~G~~~Vdts~LdGE 229 (1178)
T PLN03190 150 TAVKDAYEDWRRHRSDRIENNRLAWVLVDDQFQEKKWKDIRVGEIIKIQANDTLPCDMVLLSTSDPTGVAYVQTINLDGE 229 (1178)
T ss_pred HHHHHHHHHHHHHHhHHhhcCcEEEEEECCeEEEEeHHHCCCCCEEEECCCCEeeeeEEEEeccCCCceEEEEccccCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
|+||.|.+...+... ..+..++++.++||.||+++|+|+|++++. ++..|++.+|+++|||.++||+|++|+|+
T Consensus 230 t~~k~k~~~~~~~~~-~~~~~~~~~~i~~e~Pn~~l~~F~G~i~~~-----~~~~~l~~~n~llRG~~LrnT~~i~GvVV 303 (1178)
T PLN03190 230 SNLKTRYAKQETLSK-IPEKEKINGLIKCEKPNRNIYGFQANMEVD-----GKRLSLGPSNIILRGCELKNTAWAIGVAV 303 (1178)
T ss_pred eeeeEecccchhhhc-chhhhhceEEEEEeCCCccceeEEEEEEEC-----CCcccCCccceeeccceecCCceEEEEEE
Confidence 999999876544321 223456789999999999999999999873 45568899999999999999999999999
Q ss_pred EecCccccccccCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCC----------cc-
Q 001304 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE----------FP- 308 (1104)
Q Consensus 240 ~tG~~T~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~----------~~- 308 (1104)
|||+|||+++|...++.|.|++|+.+|+++.+++++++++|+++++++..|........||+..... .+
T Consensus 304 YTG~dTK~~~N~~~~~~K~S~le~~~N~~vi~l~~i~~~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 383 (1178)
T PLN03190 304 YCGRETKAMLNNSGAPSKRSRLETRMNLEIIILSLFLIALCTIVSVCAAVWLRRHRDELDTIPFYRRKDFSEGGPKNYNY 383 (1178)
T ss_pred EechhhhHhhcCCCCCCCccHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence 9999999999999999999999999999999999999999888887766665433334444422100 00
Q ss_pred --h-hhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCC
Q 001304 309 --W-YELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (1104)
Q Consensus 309 --~-~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGT 385 (1104)
+ ...+..+++++++++.+||+||+|+++++|..|+++|+||.+|+++..+.++.+|+++++|+||+|+|||+|||||
T Consensus 384 ~~~~~~~~~~f~~~lil~~~~IPISL~Vtleivk~~qa~~I~~D~~m~~~~~~~~~~vr~snl~EeLGqV~yIfSDKTGT 463 (1178)
T PLN03190 384 YGWGWEIFFTFLMSVIVFQIMIPISLYISMELVRVGQAYFMIRDDQMYDEASNSRFQCRALNINEDLGQIKYVFSDKTGT 463 (1178)
T ss_pred chhhHHHHHHHHHHHHHHHhhcceeeeeeHHHHHHHHHHHHHhhhhcccccCCCcceeccCcchhhhccceEEEEcCCCc
Confidence 1 1234556667788999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcceEEEEEEEecEEecCCCCcC----------------------CCchhhhhhhcc-----CCchHHHHHHHHhhhc
Q 001304 386 LTENRMIFRRCCIGGIFYGNETGDA----------------------LKDVGLLNAITS-----GSPDVIRFLTVMAVCN 438 (1104)
Q Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~-----~~~~~~~~~~~lalc~ 438 (1104)
||+|+|+|++|+++|..|+.+.... ..++.+.+.... ..+.+.+|+.++|+||
T Consensus 464 LT~N~M~fk~~~i~g~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~lalCh 543 (1178)
T PLN03190 464 LTENKMEFQCASIWGVDYSDGRTPTQNDHAGYSVEVDGKILRPKMKVKVDPQLLELSKSGKDTEEAKHVHDFFLALAACN 543 (1178)
T ss_pred cccceEEEEEEEECCEEcccccccchhhhhccccccccccccccccccCCHHHHhhhhccccchhhHHHHHHHHHHHhcC
Confidence 9999999999999999997431100 001111111110 1123568999999999
Q ss_pred ccccccCC---C---CceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEE
Q 001304 439 TVIPAKSK---A---GAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVK 512 (1104)
Q Consensus 439 ~~~~~~~~---~---~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~ 512 (1104)
++.+...+ + +.+.|+++||||.||+++|+++|+.+..|+++.+.++..+...+|++++++||+|+||||||+++
T Consensus 544 tv~~~~~~~~~~~~~~~~~Y~a~SPdE~ALv~~a~~~G~~l~~r~~~~i~i~~~~~~~~~~il~~~pF~S~rKrMSvIv~ 623 (1178)
T PLN03190 544 TIVPIVVDDTSDPTVKLMDYQGESPDEQALVYAAAAYGFMLIERTSGHIVIDIHGERQRFNVLGLHEFDSDRKRMSVILG 623 (1178)
T ss_pred CceeeccCCCCCccccceEEecCCCcHHHHHHHHHHCCCeEecccCCeEEEeeccceecceeEEEecccccccEEEEEEE
Confidence 99885321 2 24679999999999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCcEEEEecChHHhhhhhhccC---CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHH
Q 001304 513 DCHSGNISLLSKGADEAILPYAHAG---QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREW 589 (1104)
Q Consensus 513 ~~~~~~~~l~~KGa~e~i~~~~~~~---~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~ 589 (1104)
++ ++++++|+|||||+|+++|... ...+++.+++++||++|+||||+|||+++++|+++|.++|++|..++.+|++
T Consensus 624 ~~-~~~~~l~~KGA~e~il~~~~~~~~~~~~~~~~~~l~~~a~~GlRtL~lA~k~l~~~e~~~~~~~~~~a~~~~~~r~~ 702 (1178)
T PLN03190 624 CP-DKTVKVFVKGADTSMFSVIDRSLNMNVIRATEAHLHTYSSLGLRTLVVGMRELNDSEFEQWHFSFEAASTALIGRAA 702 (1178)
T ss_pred cC-CCcEEEEEecCcHHHHHhhcccccchhHHHHHHHHHHHHhcCCceEEEEEEeCCHHHHhhHHHHHHHhhhhhhhhHH
Confidence 86 6789999999999999999743 2356788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH
Q 001304 590 RIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669 (1104)
Q Consensus 590 ~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~ 669 (1104)
.++++.+++|+||+++|+++++|++|++++++|+.|++|||++||+|||+.+||++||++|||+++++. .+.+++...
T Consensus 703 ~l~~~~~~iE~dL~~lG~~~~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s~~Ll~~~~~--~i~i~~~~~ 780 (1178)
T PLN03190 703 LLRKVASNVENNLTILGASAIEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYSSKLLTNKMT--QIIINSNSK 780 (1178)
T ss_pred HHHhhHHhhhcCcEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhCCCCCCCe--eEEecCCch
Confidence 999999999999999999999999999999999999999999999999999999999999999998765 556666555
Q ss_pred HHHHHHHHHHHHHcc--------------ccCCCCCceEEEEcchhHHHHHH-HHHHHHHhHhhhccceeeeccChhhHH
Q 001304 670 DEVCRSLERVLLTMR--------------ITTSEPKDVAFVVDGWALEIALK-HYRKAFTELAILSRTAICCRVTPSQKA 734 (1104)
Q Consensus 670 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~lvi~g~~l~~~~~-~~~~~f~~l~~~~~~~i~~r~sP~qK~ 734 (1104)
++....++..+.... .......+.++++||.+++.+++ +.++.|.+++..|+++||||++|+||+
T Consensus 781 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lVIdG~~L~~~l~~~~~~~f~~l~~~~~~VI~cR~sP~QKa 860 (1178)
T PLN03190 781 ESCRKSLEDALVMSKKLTTVSGISQNTGGSSAAASDPVALIIDGTSLVYVLDSELEEQLFQLASKCSVVLCCRVAPLQKA 860 (1178)
T ss_pred hhHHHHHHHHhhhhhhccccccccccccccccccCCceEEEEEcHHHHHHhhhHHHHHHHHHHHhCCEEEEecCCHHHHH
Confidence 444444333221100 00112356789999999999986 466789999999999999999999999
Q ss_pred HHHHHHHhc-CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHHHHhhhhhhhhhhhHHHHhH
Q 001304 735 QLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYS 813 (1104)
Q Consensus 735 ~iV~~lk~~-~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~ 813 (1104)
++|+.+|+. +++|+|||||+||++|||+||||||++|+||.||+++|||+|.+|++|.+|+++||||+|.|++++++|+
T Consensus 861 ~IV~~vk~~~~~vtlaIGDGaNDv~mIq~AdVGIGIsG~EG~qA~~aSDfaI~~Fr~L~rLLlvHGr~~y~R~s~~i~y~ 940 (1178)
T PLN03190 861 GIVALVKNRTSDMTLAIGDGANDVSMIQMADVGVGISGQEGRQAVMASDFAMGQFRFLVPLLLVHGHWNYQRMGYMILYN 940 (1178)
T ss_pred HHHHHHHhcCCcEEEEECCCcchHHHHHhcCeeeeecCchhHHHHHhhccchhhhHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 999999986 5899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhh-hhhccCCCCchhhccCCccccccccCcccCchhhH
Q 001304 814 FYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVL-VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFA 892 (1104)
Q Consensus 814 ~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~-~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~ 892 (1104)
||||+++++++|||+++++|+|+++|++|.+++||++||++|++ +++||+|.+++.++++|++|+.+++++.++.+.|+
T Consensus 941 fYKN~~~~~~qf~f~~~~~fSg~~ly~~~~~~~yN~~fTslPii~~~ifD~dv~~~~l~~~P~LY~~~~~~~~~n~~~F~ 1020 (1178)
T PLN03190 941 FYRNAVFVLVLFWYVLFTCFTLTTAINEWSSVLYSVIYTALPTIVVGILDKDLSRRTLLKYPQLYGAGQRQEAYNSKLFW 1020 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHhHHHHHHHHhcccCCHHHHHhCcHhhhhhccCCccCHHHHH
Confidence 99999999999999999999999999999999999999999999 67999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhhheeecccccceeeeehhhhHHHHHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhcC
Q 001304 893 GWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIP 972 (1104)
Q Consensus 893 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp 972 (1104)
.|++.|+|||+++|+++++.+.....+..+.+...++.+++...+.+.+++++|+|++++++|+|+++++++.+++..+|
T Consensus 1021 ~w~~~~i~qs~iiff~~~~~~~~~~~~~~~~~~~~~~~~v~~vnl~i~~~~~~wt~~~~~~i~~Si~~~~i~~~~~~~~~ 1100 (1178)
T PLN03190 1021 LTMIDTLWQSAVVFFVPLFAYWASTIDGSSIGDLWTLAVVILVNLHLAMDIIRWNWITHAAIWGSIVATFICVIVIDAIP 1100 (1178)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCcCceeEhHhhhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999998877654333444555666667777778888899999999999999999999998888887777
Q ss_pred CchhHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHHHHHHHHhcC
Q 001304 973 SSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQQAERMGG 1030 (1104)
Q Consensus 973 ~~~~~~~~~~~~~~~~~w~~ill~~~~~llp~~i~k~~~~~~~p~~~~~~~e~~~~~~ 1030 (1104)
....|+.++.++.++.||+.++++++++++|++++|++++.++|+.++++|+.++.+.
T Consensus 1101 ~~~~~~~~~~~~~~~~fwl~ill~~~~~l~p~~~~~~~~~~~~P~~~~~~~~~~~~~~ 1158 (1178)
T PLN03190 1101 TLPGYWAIFHIAKTGSFWLCLLAIVVAALLPRFVVKVLYQYFTPCDVQIAREAEKFGT 1158 (1178)
T ss_pred cchhHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHhcc
Confidence 5555667778888999999999999999999999999999999999999998765433
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-161 Score=1545.03 Aligned_cols=1001 Identities=39% Similarity=0.690 Sum_probs=878.0
Q ss_pred CCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHHhhhhH
Q 001304 17 YCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDK 96 (1104)
Q Consensus 17 ~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~~ 96 (1104)
|++|+++|+||++|+|+|++||+||++++|+|||++++++++|.+++.++.++++||+++++++++++++||++|+++|+
T Consensus 1 ~~~N~i~tskY~~~~flp~~l~~qf~~~~N~yfl~i~ilq~ip~~s~~~~~t~~~pL~~v~~~~~~~~~~ed~~r~~~d~ 80 (1057)
T TIGR01652 1 FCSNKISTTKYTVLTFLPKNLFEQFKRFANLYFLVVALLQQVPILSPTYRGTSIVPLAFVLIVTAIKEAIEDIRRRRRDK 80 (1057)
T ss_pred CCCCcccCccCcchhhhHHHHHHHHHHHhhHHHHHHHHHHcCCCcCCCCccHhHHhHHHHHHHHHHHHHHHHHHHHHhHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhcceEEEEEEC-CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCC-
Q 001304 97 KANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGM- 174 (1104)
Q Consensus 97 ~~n~~~~~V~r~-g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~- 174 (1104)
+.|+++|+|+|+ |++++++|+||+|||||+|++||.||||++||+|++++|.|+||||+|||||+|+.|++...+...
T Consensus 81 ~~n~~~~~v~~~~~~~~~i~~~~l~~GDiv~l~~g~~iPaD~~ll~ss~~~g~~~v~~s~l~GEs~~~~k~~~~~~~~~~ 160 (1057)
T TIGR01652 81 EVNNRLTEVLEGHGQFVEIPWKDLRVGDIVKVKKDERIPADLLLLSSSEPDGVCYVETANLDGETNLKLRQALEETQKML 160 (1057)
T ss_pred HHhCcEEEEECCCCcEEEeeeecccCCCEEEEcCCCcccceEEEEeccCCCceEEEEeeccCCeecceEeecchhhhccC
Confidence 999999999997 899999999999999999999999999999999999999999999999999999999987655433
Q ss_pred CHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccCCC
Q 001304 175 DFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIP 254 (1104)
Q Consensus 175 ~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~~~ 254 (1104)
...++.++++.++|+.|++++|+|+|++++.+ ++..|++.+|+++|||.+++|+|++|+|+|||++|+++++....
T Consensus 161 ~~~~~~~~~~~i~~~~p~~~l~~F~G~~~~~~----~~~~~l~~~N~l~rGs~l~nt~~~~gvVvyTG~~Tk~~~n~~~~ 236 (1057)
T TIGR01652 161 DEDDIKNFSGEIECEQPNASLYSFQGNMTING----DRQYPLSPDNILLRGCTLRNTDWVIGVVVYTGHDTKLMRNATQA 236 (1057)
T ss_pred ChhhHhhceEEEEEcCCCCcceEEEEEEEECC----CCcccCCHHHhHhcCCEecCCCeEEEEEEEEchhhhhhhcCCCC
Confidence 44567788999999999999999999998743 25568999999999999999889999999999999999999888
Q ss_pred CCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCC--CcchhhhhhhHHHHHHhhhccccchhH
Q 001304 255 EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ--EFPWYELLVIPLRFELLCSIMIPISIK 332 (1104)
Q Consensus 255 ~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~iP~~L~ 332 (1104)
+.|+|++++.+|+++.++++++++++++.++++.+|........||+.... .......+..+++++++++.+||++|+
T Consensus 237 ~~k~s~le~~ln~~~~~l~~~~i~l~~i~~i~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~~L~~~~IPisL~ 316 (1057)
T TIGR01652 237 PSKRSRLEKELNFLIIILFCLLFVLCLISSVGAGIWNDAHGKDLWYIRLDVSERNAAANGFFSFLTFLILFSSLIPISLY 316 (1057)
T ss_pred cccccHHHHHHhhHHHHHHHHHHHHHHHHHHHHHheecccCCCccceecCcccccchhHHHHHHHHHHHHHhhhcceeee
Confidence 999999999999999999988888888887776666543334468764321 111223444566778899999999999
Q ss_pred HHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCc---
Q 001304 333 VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGD--- 409 (1104)
Q Consensus 333 v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~--- 409 (1104)
+++++++.+++++|+||.+|++++.+.++.+|+++++|+||+|+|||+|||||||+|+|+|++|+++|..|+....+
T Consensus 317 v~l~l~~~~~~~~i~~D~~m~~~~~~~~~~vr~~~~~E~LG~v~~I~sDKTGTLT~N~M~~~~~~i~g~~y~~~~~~~~~ 396 (1057)
T TIGR01652 317 VSLELVKSVQAYFINSDLQMYHEKTDTPASVRTSNLNEELGQVEYIFSDKTGTLTQNIMEFKKCSIAGVSYGDGFTEIKD 396 (1057)
T ss_pred ehHHHHHHHHHHHHhhhhhhhccccCCcceeecCCChHHhcCeeEEEEcCCCceeeeeEEEEEEEECCEEecCCcchHHH
Confidence 99999999999999999999998888889999999999999999999999999999999999999999988743210
Q ss_pred -----------------------CCCchhhhhhhcc---CCchHHHHHHHHhhhccccccc--CCCCceeeecCCccHHH
Q 001304 410 -----------------------ALKDVGLLNAITS---GSPDVIRFLTVMAVCNTVIPAK--SKAGAILYKAQSQDEEA 461 (1104)
Q Consensus 410 -----------------------~~~~~~~~~~~~~---~~~~~~~~~~~lalc~~~~~~~--~~~~~~~~~~~~p~e~A 461 (1104)
...++++.+.... ..+...+++.++++||++.+.. ++++.+.|+++||+|.|
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~lC~~v~~~~~~~~~~~~~y~~~sp~E~A 476 (1057)
T TIGR01652 397 AIRERLGSYVENENSMLVESKGFTFVDPRLVDLLKTNKPNAKRINEFFLALALCHTVVPEFNDDGPEEITYQAASPDEAA 476 (1057)
T ss_pred HhhhcccccccccccccccccccccCcHHHHHhhhcCCchhHHHHHHHHHHHhcCcccccccCCCCCceEEEccCCcHHH
Confidence 0001222222111 1234678999999999999875 22345779999999999
Q ss_pred HHHHHHhcCcEEEeecCc--EEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC--
Q 001304 462 LVHAAAQLHMVLVNKNAS--ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-- 537 (1104)
Q Consensus 462 l~~~a~~~g~~~~~~~~~--~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~-- 537 (1104)
|+++|+..|+.+.+|+.+ .+.++..+....|++++++||+|+||||||+++++ ++++++|+|||||+|+++|...
T Consensus 477 Ll~~a~~~g~~~~~~~~~~~~~~i~~~~~~~~~~il~~~pF~s~rKrmSviv~~~-~~~~~l~~KGA~e~il~~~~~~~~ 555 (1057)
T TIGR01652 477 LVKAARDVGFVFFERTPKSISLLIEMHGETKEYEILNVLEFNSDRKRMSVIVRNP-DGRIKLLCKGADTVIFKRLSSGGN 555 (1057)
T ss_pred HHHHHHHCCCEEEEecCCceEEEEEeCCCEEEEEEEEecccCCCCCeEEEEEEeC-CCeEEEEEeCcHHHHHHHhhccch
Confidence 999999999999999887 55566778888999999999999999999999986 5789999999999999999852
Q ss_pred CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCC
Q 001304 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (1104)
Q Consensus 538 ~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~ 617 (1104)
+..+++.+++++|+.+|+|||++|||.++++|+++|.++|+++..++.+|++.+++.++++|+||+|+|++|+||+||++
T Consensus 556 ~~~~~~~~~~~~~a~~GlRtL~~A~k~l~~~e~~~~~~~~~~a~~~~~~r~~~~~~~~~~iE~~L~~lG~~gieD~lq~~ 635 (1057)
T TIGR01652 556 QVNEETKEHLENYASEGLRTLCIAYRELSEEEYEEWNEEYNEASTALTDREEKLDVVAESIEKDLILLGATAIEDKLQEG 635 (1057)
T ss_pred hHHHHHHHHHHHHHHcCCcEEEEEEEECCHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCEEEEEEEEhhhhhhc
Confidence 23567889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHH---HHHHHHHHHcc---ccCCCCC
Q 001304 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVC---RSLERVLLTMR---ITTSEPK 691 (1104)
Q Consensus 618 ~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~ 691 (1104)
++++|+.|++|||++||+|||+++||.+||++||+++++.+ ++.+++.+.++.. ..+.+...... .......
T Consensus 636 v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~~~~ii~~~~~--~~~i~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 713 (1057)
T TIGR01652 636 VPETIELLRQAGIKIWVLTGDKVETAINIGYSCRLLSRNME--QIVITSESLDATRSVEAAIKFGLEGTSEEFNNLGDSG 713 (1057)
T ss_pred cHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCCCCCCCe--EEEEecCchhhhHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 99999999999999999999999999999999999987654 6666665544322 11221111110 0112345
Q ss_pred ceEEEEcchhHHHHHHH-HHHHHHhHhhhccceeeeccChhhHHHHHHHHHhc-CCeEEEEcCCccChhhhhhcCceEEe
Q 001304 692 DVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~-~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~-~~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
+.+++++|++++.++++ .+++|.++...++++||||++|+||+++|+.+|+. |++|+|||||+||++|||+||||||+
T Consensus 714 ~~~lvi~G~~l~~~l~~~~~~~f~~l~~~~~~vV~aR~sP~qK~~IV~~lk~~~~~~vl~iGDG~ND~~mlk~AdVGIgi 793 (1057)
T TIGR01652 714 NVALVIDGKSLGYALDEELEKEFLQLALKCKAVICCRVSPSQKADVVRLVKKSTGKTTLAIGDGANDVSMIQEADVGVGI 793 (1057)
T ss_pred ceEEEEccHHHHHHHhhHHHHHHHHHHhhCCEEEEeCCCHHHHHHHHHHHHhcCCCeEEEEeCCCccHHHHhhcCeeeEe
Confidence 78899999999988775 46788888888889999999999999999999997 99999999999999999999999999
Q ss_pred cCCchHHHhhhcceecccchhhHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHH
Q 001304 770 SGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNV 849 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl 849 (1104)
+|++|.||+++|||++.+|++|.+++++|||++|+|+++++.|.||||+++.+++++|.++++|+|+++|++++++|||+
T Consensus 794 ~g~eg~qA~~aaD~~i~~F~~L~~lll~~GR~~~~r~~~~i~~~~~kn~~~~~~~~~~~~~~~~s~~~~~~~~~l~~~n~ 873 (1057)
T TIGR01652 794 SGKEGMQAVMASDFAIGQFRFLTKLLLVHGRWSYKRISKMILYFFYKNLIFAIIQFWYSFYNGFSGQTLYEGWYMVLYNV 873 (1057)
T ss_pred cChHHHHHHHhhhhhhhhHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred Hhhhhhhhh-hhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeeccc-------ccce
Q 001304 850 FYTSIPVLV-STIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEK-------SEME 921 (1104)
Q Consensus 850 ~~~~lp~~~-~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-------~~~~ 921 (1104)
++|++|+++ +++|+|++++.++++|.+|+.++++..++.+.|+.|++.|+|||+++|++++..+.... .+..
T Consensus 874 ~~t~lp~~~l~~~d~~~~~~~l~~~P~ly~~~~~~~~~~~~~f~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~~~ 953 (1057)
T TIGR01652 874 FFTALPVISLGVFDQDVSASLSLRYPQLYREGQKGQGFSTKTFWGWMLDGIYQSLVIFFFPMFAYILGDFVSSGSLDDFS 953 (1057)
T ss_pred HHHhHHHHHHHHhcccCCHHHHHhChHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccCCcccchh
Confidence 999999995 57899999999999999999999999999999999999999999999998877665321 1234
Q ss_pred eeeehhhhHHHHHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhcC-CchhHHHHHHhccCHHHHHHHHHHHHHH
Q 001304 922 EVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIP-SSGMYTIMFRLCSQPSYWITMFLIVAAG 1000 (1104)
Q Consensus 922 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp-~~~~~~~~~~~~~~~~~w~~ill~~~~~ 1000 (1104)
.+++..|+.+++...+.+.+.+++|+|+++.++|+|+++|+++.+++...+ ..+.|+.+..++.+|.+|+.++++++++
T Consensus 954 ~~~~~~~~~~~~~~~~~~~~~~~~wt~~~~~~~~~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~f~l~~ll~~~~~ 1033 (1057)
T TIGR01652 954 SVGVIVFTALVVIVNLKIALEINRWNWISLITIWGSILVWLIFVIVYSSIFPSPAFYKAAPRVMGTFGFWLVLLVIVLIS 1033 (1057)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHHHhhcccccHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 556677778888888888889999999999999999999988887776443 4456777788888999999999999999
Q ss_pred HHHHHHHHHHHHhhCCChHHHHHH
Q 001304 1001 MGPIVALKYFRYTYRASKINILQQ 1024 (1104)
Q Consensus 1001 llp~~i~k~~~~~~~p~~~~~~~e 1024 (1104)
++|.++++++++.|+|+.++++||
T Consensus 1034 l~p~~~~~~~~~~~~P~~~~~i~~ 1057 (1057)
T TIGR01652 1034 LLPRFTYKAIQRLFRPPDYDIVQE 1057 (1057)
T ss_pred HHHHHHHHHHHHHcCCCHHHHhhC
Confidence 999999999999999999999864
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-147 Score=1218.68 Aligned_cols=968 Identities=33% Similarity=0.522 Sum_probs=844.8
Q ss_pred ccEEEeCCC-cccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHH
Q 001304 2 KRYIYINDD-ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVS 80 (1104)
Q Consensus 2 ~r~i~~n~~-~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~ 80 (1104)
+|++.+... ..++.+|++|.+++.||++++|+|..+++||+-+.|+|||+.++.|++|.+....+.+.|.|+.+++.++
T Consensus 63 ~rt~~~~~~~~~~~~r~~pn~v~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~it 142 (1051)
T KOG0210|consen 63 GRTVNISFGPHYRRRRFPPNEVRNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTIT 142 (1051)
T ss_pred CceeecccCCCcccccCCCchhhhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHH
Confidence 444444431 1467899999999999999999999999999999999999999999999887778889999999999999
Q ss_pred HHHHHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCC
Q 001304 81 ATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (1104)
Q Consensus 81 ~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs 160 (1104)
+++++++|++|++.|++.|+...+++........++++|+|||+|.++.|++||||+++|.+++++|+|+|.|..|||||
T Consensus 143 l~keavdd~~r~~rd~~~Nse~y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~sg~~FiRTDQLDGET 222 (1051)
T KOG0210|consen 143 LIKEAVDDLKRRRRDRELNSEKYTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKSGSCFIRTDQLDGET 222 (1051)
T ss_pred HHHHHHHHHHHHHhhhhhhhhhheeeccCCcccccccccccccEEEEecCCcCCcceEEEEccCCCCceEEeccccCCcc
Confidence 99999999999999999999999988433344449999999999999999999999999999999999999999999999
Q ss_pred CceEeeccccccCCCHh-hhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 161 DLKTRLIPAACMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 161 ~~~~K~~~~~~~~~~~~-~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
+.|.|-|.+.+.+++.+ ++.+++ +-.|.|++++++|.|++++.. ++++.+++.+|+++++|.+.+| .++|+|+
T Consensus 223 DWKLrl~vp~tQ~l~~~~el~~i~--v~Ae~P~kdIh~F~Gt~~~~d---~~~~~~LsventLWanTVvAs~-t~~gvVv 296 (1051)
T KOG0210|consen 223 DWKLRLPVPRTQHLTEDSELMEIS--VYAEKPQKDIHSFVGTFTITD---SDKPESLSVENTLWANTVVASG-TAIGVVV 296 (1051)
T ss_pred cceeeccchhhccCCcccchheEE--EeccCcchhhHhhEEEEEEec---CCCCCcccccceeeeeeeEecC-cEEEEEE
Confidence 99999998888777654 677666 889999999999999999854 4455899999999999999998 4999999
Q ss_pred EecCccccccccCCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHH
Q 001304 240 YTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRF 319 (1104)
Q Consensus 240 ~tG~~T~~~~~~~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1104)
|||.||+..+|...++.|-.-++..+|.+.+++++++++++++......+ ++.|+- .+++|
T Consensus 297 YTG~dtRsvMNts~pr~KvGllelEiN~ltKiL~~~vlvLs~vmv~~~g~----------------~~~wyi---~~~Rf 357 (1051)
T KOG0210|consen 297 YTGRDTRSVMNTSRPRSKVGLLELEINGLTKILFCFVLVLSIVMVAMKGF----------------GSDWYI---YIIRF 357 (1051)
T ss_pred EecccHHHHhccCCcccccceeeeecccHHHHHHHHHHHHHHHHHHhhcC----------------CCchHH---HHHHH
Confidence 99999999999999999999999999999999999988888766543211 123333 33688
Q ss_pred HHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEe
Q 001304 320 ELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIG 399 (1104)
Q Consensus 320 ~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~ 399 (1104)
+++++.+||++|-|.++++|.++++.|..|.++- +..+|++++.|+||+|+|+.+|||||||+|+|.++++..+
T Consensus 358 llLFS~IIPISLRvnlDmaK~~ys~~i~~D~~Ip------gtvvRSstIPEeLGRIsylLtDKTGTLTqNEM~~KKiHLG 431 (1051)
T KOG0210|consen 358 LLLFSSIIPISLRVNLDMAKIVYSWQIEHDKNIP------GTVVRSSTIPEELGRISYLLTDKTGTLTQNEMEFKKIHLG 431 (1051)
T ss_pred HHHHhhhceeEEEEehhHHHhhHhhhcccCCCCC------ceeeecCCChHHhcceEEEEecCcCccccchheeeeeeee
Confidence 8899999999999999999999999888887763 3679999999999999999999999999999999999999
Q ss_pred cEEecCCCCcCCC-------------chhhhhhh-ccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHH
Q 001304 400 GIFYGNETGDALK-------------DVGLLNAI-TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (1104)
Q Consensus 400 ~~~~~~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~ 465 (1104)
-..|..+..+... .+-..... ...+..+.+..+++|+||++.|..++||...|++.||||.|++++
T Consensus 432 Tv~~s~e~~~eV~~~i~s~~~~~~~~~~~~~~~~k~~~s~rv~~~V~alalCHNVTPv~e~~ge~sYQAaSPDEVAiVkw 511 (1051)
T KOG0210|consen 432 TVAYSAETMDEVSQHIQSLYTPGRNKGKGALSRVKKDMSARVRNAVLALALCHNVTPVFEDDGEVSYQAASPDEVAIVKW 511 (1051)
T ss_pred eeeccHhHHHHHHHHHHHhhCCCcccccccchhhcCcccHHHHHHHHHHHHhccCCcccCCCceEEeecCCCCeEEEEEe
Confidence 8877654221110 00000000 111234678899999999999999999999999999999999999
Q ss_pred HHhcCcEEEeecCcEEEEEeC-CeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHH
Q 001304 466 AAQLHMVLVNKNASILEIKFN-GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (1104)
Q Consensus 466 a~~~g~~~~~~~~~~~~~~~~-~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~ 544 (1104)
....|..+..|+.+.+.+... +...+|+||.++||+|+.|||++|||++.++++.+|.||||.+|-...+. .++++
T Consensus 512 Te~VGl~L~~Rd~~~itL~~~~~~~~~yqIL~vFPFtsEtKRMGIIVr~e~~~evtfylKGAD~VMs~iVq~---NdWle 588 (1051)
T KOG0210|consen 512 TETVGLKLAKRDRHAITLRVPLDDELNYQILQVFPFTSETKRMGIIVRDETTEEVTFYLKGADVVMSGIVQY---NDWLE 588 (1051)
T ss_pred eeecceEEeecccceEEEecCCCcceeEEEEEEeccccccceeeEEEecCCCceEEEEEecchHHHhccccc---chhhh
Confidence 999999999999999988764 56789999999999999999999999998999999999999999887654 37899
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHH-HhccCcEEEEEEeecccCCCChHHHHH
Q 001304 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ-RLEHDLKVLGVTAIEDRLQDGVPETIE 623 (1104)
Q Consensus 545 ~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~-~ie~~l~llG~i~i~D~lr~~~~~~I~ 623 (1104)
+...+||++|+|||++|+|.++++||+.+...|..|+.++.||.+++.++.+ .+|+||++||++|.||+||++|+.+++
T Consensus 589 EE~gNMAREGLRtLVvakK~Ls~~eye~Fe~~y~~A~lSi~dR~~~ma~vv~~~LE~dlelL~LTGVEDkLQ~dVk~tLE 668 (1051)
T KOG0210|consen 589 EECGNMAREGLRTLVVAKKVLSEEEYEAFEEAYNAAKLSISDRDQKMANVVERYLERDLELLGLTGVEDKLQDDVKPTLE 668 (1051)
T ss_pred hhhhhhhhhcceEEEEEecccCHHHHHHHHHHHHhhhCccchHHHHHHHHHHHHHHhhhHHhcccChHHHHhhhhHhHHH
Confidence 9999999999999999999999999999999999999999999999999988 999999999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecC-CcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhH
Q 001304 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG-KTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWAL 702 (1104)
Q Consensus 624 ~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 702 (1104)
.||+||||+||+|||+.+||+.||++.++++.++. +..+.. ....+....++.. ....+.+++++|++|
T Consensus 669 lLRNAgikiWMLTGDKlETA~ciAkSs~L~sR~q~--ihv~~~v~sr~dah~eL~~l--------R~k~~~aLvi~G~Sl 738 (1051)
T KOG0210|consen 669 LLRNAGIKIWMLTGDKLETAICIAKSSRLFSRGQY--IHVIRSVTSRGDAHNELNNL--------RRKTDCALVIDGESL 738 (1051)
T ss_pred HHhhcCcEEEEEcCcchhheeeeehhccceecCce--EEEEEecCCchHHHHHHHHh--------hcCCCcEEEEcCchH
Confidence 99999999999999999999999999999988765 333332 3334444433322 245678999999999
Q ss_pred HHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhc
Q 001304 703 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781 (1104)
Q Consensus 703 ~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~A 781 (1104)
+..++.+++.|.++...+.+++|||++|.||+++++.+|+ .|..|++||||.||+.|+++||+|||+-|+||.||.-+|
T Consensus 739 ~~cl~yye~Ef~el~~~~~aVv~CRctPtQKA~v~~llq~~t~krvc~IGDGGNDVsMIq~A~~GiGI~gkEGkQASLAA 818 (1051)
T KOG0210|consen 739 EFCLKYYEDEFIELVCELPAVVCCRCTPTQKAQVVRLLQKKTGKRVCAIGDGGNDVSMIQAADVGIGIVGKEGKQASLAA 818 (1051)
T ss_pred HHHHHHHHHHHHHHHHhcCcEEEEecChhHHHHHHHHHHHhhCceEEEEcCCCccchheeecccceeeecccccccchhc
Confidence 9999999999999999999999999999999999999997 589999999999999999999999999999999999999
Q ss_pred ceecccchhhHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhc
Q 001304 782 DYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTI 861 (1104)
Q Consensus 782 D~vl~~f~~l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~ 861 (1104)
||.|.+|+++.+|+++|||.+|.|.+++.+|.+.|.++++.+|..|+....|...++|..+.|..|..++|.+|++.+++
T Consensus 819 DfSItqF~Hv~rLLl~HGR~SYkrsa~laqfViHRGL~Is~~Qavfs~v~yF~~V~LyqG~LmvgysT~YTmlPVFSlv~ 898 (1051)
T KOG0210|consen 819 DFSITQFSHVSRLLLWHGRNSYKRSAKLAQFVIHRGLIISTMQAVFSSVFYFAPVALYQGFLMVGYSTCYTMLPVFSLVL 898 (1051)
T ss_pred cccHHHHHHHHHHhhccccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhhcchHHhhhhHHHHHHHHHHHhhhheeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeecccccceeeeehhhhHHHHHHHHhhhh
Q 001304 862 DKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSEMEEVSMVALSGCIWLQAFVVAL 941 (1104)
Q Consensus 862 ~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 941 (1104)
|+|++++..+.+|++|+.-..++.++.++|..|++-++|||.++.++++..+. .+...+..++|++.++..++.+++
T Consensus 899 d~Dv~~~~a~~yPELYKeL~kgr~lSYKtF~iwvLISiYQG~vim~g~~~l~~---~ef~~ivaisFtaLi~tELiMVaL 975 (1051)
T KOG0210|consen 899 DRDVSESLAVLYPELYKELTKGRSLSYKTFFIWVLISIYQGSVIMYGALLLFD---TEFIHIVAISFTALILTELIMVAL 975 (1051)
T ss_pred cccccHHHHhhhHHHHHHHhcCCccchhhhhhhhhHHHHcccHHHHHHHHHhh---hhheEeeeeeeHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999887665543 223345567888888888889999
Q ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCChHHH
Q 001304 942 ETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINI 1021 (1104)
Q Consensus 942 ~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~~~~~w~~ill~~~~~llp~~i~k~~~~~~~p~~~~~ 1021 (1104)
..+.|+|...++-..++..+++... +...|.. .....+..|++-+.++.+++++|.++.|+++|.+.|+.+.+
T Consensus 976 tv~tw~~~m~vae~lsL~~Yivsl~------~l~~yfd-~~f~~~~~Fl~k~t~I~~vS~Lpl~~~K~lrrk~sPpSYaK 1048 (1051)
T KOG0210|consen 976 TVRTWHWLMVVAELLSLALYIVSLA------FLHEYFD-RYFILTYVFLWKVTVITLVSCLPLYFIKALRRKLSPPSYAK 1048 (1051)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHH------HHHhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcchhh
Confidence 9999998877766666555543322 2221111 11122666777788889999999999999999999999988
Q ss_pred HH
Q 001304 1022 LQ 1023 (1104)
Q Consensus 1022 ~~ 1023 (1104)
++
T Consensus 1049 l~ 1050 (1051)
T KOG0210|consen 1049 LQ 1050 (1051)
T ss_pred cc
Confidence 75
|
|
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-117 Score=1111.57 Aligned_cols=812 Identities=28% Similarity=0.400 Sum_probs=637.4
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCc-chhhHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPA-STWGPLIFIFAVSATKEAWDDY 89 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~-~~~~~l~~i~~i~~~~~~~~d~ 89 (1104)
+|++.||.|+++..+. ++| +.++.||.++++..+++.++++++... ..+. .....++.+++++++..++|++
T Consensus 52 ~r~~~~G~N~~~~~~~~~~~----~~fl~~f~~~~~~iL~~~a~~s~~~~~--~~~~~~~~~~I~~~i~~n~~~g~~qe~ 125 (917)
T COG0474 52 RRLKKYGPNELPEEKKRSLL----KKFLRQFKDPFIILLLVAALLSAFVGD--WVDAGVDAIVILLVVVINALLGFVQEY 125 (917)
T ss_pred HHHhhcCCccccccccCcHH----HHHHHHHHHHHHHHHHHHHHHHHHhhc--ccccCcceeeehHHHHHHHHHHHHHHH
Confidence 4778999999998765 555 889999999999888888888776542 1111 2333445566677777888999
Q ss_pred HHhh---hhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEee
Q 001304 90 NRYL---SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1104)
Q Consensus 90 ~~~~---~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1104)
++.+ +++++.+.+++|+|||++++|+|+||||||||+|++||+||||++|+++++ ++||||+|||||.|+.|+
T Consensus 126 ~a~~~l~~lk~~~~~~~~V~R~g~~~~i~a~eLVpGDiV~l~~gd~vPAD~rLl~~~~----l~VdEs~LTGES~pv~K~ 201 (917)
T COG0474 126 RAEKALEALKKMSSPKAKVLRDGKFVEIPASELVPGDIVLLEAGDVVPADLRLLESSD----LEVDESALTGESLPVEKQ 201 (917)
T ss_pred HHHHHHHHHHhhccCceEEEeCCcEEEecHHHCCCCcEEEECCCCccccceEEEEecC----ceEEcccccCCCcchhcc
Confidence 8854 577888999999999999999999999999999999999999999998886 699999999999999997
Q ss_pred ccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccc
Q 001304 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1104)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1104)
+..... .+.| ..++.+|++|+||.+++| .+.|+|++||++|+
T Consensus 202 ~~~~~~---------------~~~~----------------------~~~d~~n~l~sGt~V~~G-~~~giVvaTG~~T~ 243 (917)
T COG0474 202 ALPLTK---------------SDAP----------------------LGLDRDNMLFSGTTVVSG-RAKGIVVATGFETE 243 (917)
T ss_pred cccccc---------------cccc----------------------ccCCccceEEeCCEEEcc-eEEEEEEEEcCccH
Confidence 542110 0000 003678999999999999 69999999999999
Q ss_pred cccccCCC--C-CCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhh
Q 001304 247 LGMTRGIP--E-PKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (1104)
Q Consensus 247 ~~~~~~~~--~-~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1104)
+|+++... . .+.+++++.++++...++.+.++++++.++.+.+ . ...+|.+.+.. .+.++
T Consensus 244 ~G~ia~~~~~~~~~~t~l~~~l~~~~~~l~~~~l~~~~~~~~~~~~-~-------------~~~~~~~~~~~---~v~l~ 306 (917)
T COG0474 244 FGKIARLLPTKKEVKTPLQRKLNKLGKFLLVLALVLGALVFVVGLF-R-------------GGNGLLESFLT---ALALA 306 (917)
T ss_pred HHHHHHhhccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h-------------cCccHHHHHHH---HHHHH
Confidence 99987732 2 5789999999999999999888888777766521 1 01124555544 34589
Q ss_pred hccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEe
Q 001304 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY 403 (1104)
Q Consensus 324 ~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 403 (1104)
+++||++||+++++++.+++..+.+| + +++|+++++|+||++++||||||||||+|+|+|+++++++.
T Consensus 307 va~IPegLp~~vti~la~g~~~mak~------~----~ivr~l~avE~LG~v~vICsDKTGTLTqN~M~v~~~~~~~~-- 374 (917)
T COG0474 307 VAAVPEGLPAVVTIALALGAQRMAKD------N----AIVRSLNAIETLGSVDVICSDKTGTLTQNKMTVKKIYINGG-- 374 (917)
T ss_pred HhccccchHHHHHHHHHHHHHHHHhc------c----chhhccchhhhccCccEEEecCCCCCccCeEEEEEEEeCCC--
Confidence 99999999999999999998855433 3 67899999999999999999999999999999999999851
Q ss_pred cCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEE
Q 001304 404 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483 (1104)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~ 483 (1104)
..+ .+ + .....++...+++.++++||++.+..+ + .+..+||+|.||++++.+.|+.. +.
T Consensus 375 ~~~-~~---~-----~~~~~~~~~~~~l~~~~lc~~~~~~~~-~---~~~~gdptE~Al~~~a~~~~~~~---~~----- 433 (917)
T COG0474 375 GKD-ID---D-----KDLKDSPALLRFLLAAALCNSVTPEKN-G---WYQAGDPTEGALVEFAEKLGFSL---DL----- 433 (917)
T ss_pred ccc-cc---c-----cccccchHHHHHHHHHHhcCccccccc-C---ceecCCccHHHHHHHHHhcCCcC---CH-----
Confidence 000 00 0 011123345578999999999988765 3 67899999999999999998743 11
Q ss_pred EeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc--------CCchhHHHHHHHHHHhccc
Q 001304 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--------GQQTRTFVEAVEQYSQLGL 555 (1104)
Q Consensus 484 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~--------~~~~~~~~~~~~~~a~~Gl 555 (1104)
......|++++.+||||+|||||++++.. +|++++++|||||+|+++|+. ++.++.+++..++|+++||
T Consensus 434 --~~~~~~~~~~~~~PFdS~rKrMsviv~~~-~~~~~~~~KGApe~il~~~~~~~~~~~~~~~~~~~~~~~~~~la~~gl 510 (917)
T COG0474 434 --SGLEVEYPILAEIPFDSERKRMSVIVKTD-EGKYILFVKGAPEVILERCKSIGELEPLTEEGLRTLEEAVKELASEGL 510 (917)
T ss_pred --HHHhhhcceeEEecCCCCceEEEEEEEcC-CCcEEEEEcCChHHHHHHhcccCcccccCHHHHHHHHHHHHHHHHHHH
Confidence 23345668999999999999999999964 566999999999999999984 2234678999999999999
Q ss_pred eEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEE
Q 001304 556 RTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWML 635 (1104)
Q Consensus 556 R~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~ml 635 (1104)
|||++|||.++.++... .. +.+|+||+|+|+++|+||+|+++++||+.|++|||++||+
T Consensus 511 Rvla~A~k~~~~~~~~~--------------------~~-~~~E~dl~~lGl~g~~Dppr~~v~~aI~~l~~AGI~v~Mi 569 (917)
T COG0474 511 RVLAVAYKKLDRAEKDD--------------------EV-DEIESDLVFLGLTGIEDPPREDVKEAIEELREAGIKVWMI 569 (917)
T ss_pred HHHHHHhccCCcccccc--------------------hh-hhhhccceeehhhhccCCCCccHHHHHHHHHHCCCcEEEE
Confidence 99999999776543210 11 5789999999999999999999999999999999999999
Q ss_pred cCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHh
Q 001304 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 715 (1104)
Q Consensus 636 TGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~ 715 (1104)
||||++||.+||++||+...... .++++|..+..+.++ .+.+
T Consensus 570 TGD~~~TA~aIa~~~Gi~~~~~~-----------------------------------~~vi~G~el~~l~~~---el~~ 611 (917)
T COG0474 570 TGDHVETAIAIAKECGIEAEAES-----------------------------------ALVIDGAELDALSDE---ELAE 611 (917)
T ss_pred CCCCHHHHHHHHHHcCCCCCCCc-----------------------------------eeEeehHHhhhcCHH---HHHH
Confidence 99999999999999998554320 567888888777665 2222
Q ss_pred HhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH
Q 001304 716 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL 794 (1104)
Q Consensus 716 l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l 794 (1104)
.. .+..||||++|+||.++|+.+|+.|++|+|+|||+||+||||+||||||| |.+|+++++ +||+++.++++....
T Consensus 612 ~~--~~~~VfARvsP~qK~~IV~~lq~~g~vVamtGDGvNDapALk~ADVGIam-g~~Gtdaak~Aadivl~dd~~~~i~ 688 (917)
T COG0474 612 LV--EELSVFARVSPEQKARIVEALQKSGHVVAMTGDGVNDAPALKAADVGIAM-GGEGTDAAKEAADIVLLDDNFATIV 688 (917)
T ss_pred Hh--hhCcEEEEcCHHHHHHHHHHHHhCCCEEEEeCCCchhHHHHHhcCccEEe-cccHHHHHHhhcceEeecCcHHHHH
Confidence 22 22349999999999999999999999999999999999999999999999 767888887 889999988886555
Q ss_pred -HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccC
Q 001304 795 -ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQH 873 (1104)
Q Consensus 795 -ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~ 873 (1104)
+++|||++|.|+++++.|.+++|+...+.++++.+++.+ ..||+++|++|+|++++++|++++++++ ++.+.|++
T Consensus 689 ~av~eGR~~~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~~--~~p~~~~qll~inll~d~~pa~~L~~~~--~~~~~m~~ 764 (917)
T COG0474 689 LAVVEGRRVYVNIKKFILYLLSKNVGEVLTLLIYSLFNLF--FLPLTPLQLLWINLLTDSLPALALGVED--PESDVMKR 764 (917)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc--cccHHHHHHHHHHHHHhhhhhheeecCC--Cccccccc
Confidence 579999999999999999999999999998888887766 6789999999999999999999888874 78889999
Q ss_pred CccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeeccccc--------ceeeeehhhhH---HHHHHHHhhhhc
Q 001304 874 PQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSE--------MEEVSMVALSG---CIWLQAFVVALE 942 (1104)
Q Consensus 874 p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~--------~~~~~~~~~~~---~~~~~~~~~~~~ 942 (1104)
|| .++...+|+.+.++.|++...+++.++++++|..+...... .....+..|.. +.+++.+.++..
T Consensus 765 ~~---~~p~~~i~~~~~~~~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~~~~ 841 (917)
T COG0474 765 PP---RGPEEGLFNRKIFWRFILIIGLLSAILFILTFLLYLLGFIANTLGLDLFQALLQTTAFTVLVLIQLLLTLAVRSR 841 (917)
T ss_pred CC---CCccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 96 47888899999999999998888888887776655432211 11122333333 334444555555
Q ss_pred cccch---HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHH
Q 001304 943 TNSFT---VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFL 995 (1104)
Q Consensus 943 ~~~~~---~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill 995 (1104)
.+.|. ++.+..+|+.+++..++.++..+.|.... ..+.... +...|+..++
T Consensus 842 ~~~~~~~~~~~n~~~~~~~~~~~~l~l~~~~~~~~~~--~~f~~~~~~~~~~~~~~~ 896 (917)
T COG0474 842 GRPFLSSLLFSNKYLWLALLVIIILQLLIIFLPPLNL--KIFQPTPLSLFEWLIAIA 896 (917)
T ss_pred ccchhhcccccCHHHHHHHHHHHHHHHHHHHhHHhHh--hhccCCCCcHHHHHHHHH
Confidence 44432 23577777777777777666666555431 2233322 4455654433
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-117 Score=1009.92 Aligned_cols=864 Identities=21% Similarity=0.259 Sum_probs=647.0
Q ss_pred ccccCCCCceeecCC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k-~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~ 90 (1104)
.|++.||.|+++... .+.| +.+++||.+++..++|+.|+++++... +...+.+.++++++++..++|+|+
T Consensus 31 ~r~~~yG~Nel~~ee~~~~w----k~vLeQF~n~Li~iLL~sA~ISfvl~~-----~~e~~vI~liiv~nvtVG~~QEy~ 101 (972)
T KOG0202|consen 31 RRRKKYGENELPAEEGESLW----KLVLEQFDNPLILILLLSAAISFVLAD-----FDEPFVITLIIVINVTVGFVQEYN 101 (972)
T ss_pred HHHHhcCCccCccccCCcHH----HHHHHHHHhHHHHHHHHHHHHHHHHHh-----cccceeeeeeeeeeeeeeeeeehh
Confidence 478899999999866 4666 999999999999999999999987542 222233445556778888999999
Q ss_pred Hhhh---hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeec
Q 001304 91 RYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (1104)
Q Consensus 91 ~~~~---~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~ 167 (1104)
..|+ ++++.+..|+|+|+|+.+.+++++|||||||.|+-||+||||.+|++..+ +.||||+|||||.|+.|.+
T Consensus 102 aEkalEaLk~l~p~~~~V~R~gk~~~i~A~eLVPGDiV~l~vGDkVPADlRl~e~~s----l~iDeS~LTGEs~pv~K~t 177 (972)
T KOG0202|consen 102 AEKALEALKELVPPMAHVLRSGKLQHILARELVPGDIVELKVGDKIPADLRLIEAKS----LRIDESSLTGESEPVSKDT 177 (972)
T ss_pred hHHHHHHHHhcCCccceEEecCcccceehhccCCCCEEEEecCCccccceeEEeeee----eeeecccccCCcccccccC
Confidence 9885 56778899999999999999999999999999999999999999999887 8999999999999999954
Q ss_pred cccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcccc
Q 001304 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKL 247 (1104)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~ 247 (1104)
... | .+++..--+..|++|+||.+++| .+.|+|+.||.+|.+
T Consensus 178 ~~v--------------------~-----------------~~~~~~~~dk~NiaFsGT~V~~G-~a~GIVi~TG~nTei 219 (972)
T KOG0202|consen 178 DAV--------------------P-----------------KDENADVQDKKNIAFSGTLVVAG-RAKGIVIGTGLNTEI 219 (972)
T ss_pred ccc--------------------c-----------------CCCCCccccceeeEeecceeecC-ceeEEEEeccccchH
Confidence 210 0 01111112688999999999999 799999999999999
Q ss_pred ccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHh-h-ccccccccccccceeeccCCCcchhhhhhhHHHHHHh
Q 001304 248 GMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLG-T-AGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (1104)
Q Consensus 248 ~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (1104)
|++.. ..+..+||+|+.++.+...+.-+..++++... + ++++. .-.+...|+ ..+..+|.++++ +
T Consensus 220 G~I~~~m~~~e~~kTPLqk~ld~~G~qLs~~is~i~v~v~~~nig~f~-~p~~~g~~f------k~~~~~f~IaVs---L 289 (972)
T KOG0202|consen 220 GKIFKMMQATESPKTPLQKKLDEFGKQLSKVISFICVGVWLLNIGHFL-DPVHGGSWF------KGALYYFKIAVS---L 289 (972)
T ss_pred HHHHHHHhccCCCCCcHHHHHHHHHHHHHHHheehhhhHHHhhhhhhc-cccccccch------hchhhhhhHHHH---H
Confidence 98754 45666899999999999887733333333222 2 22111 000011121 234455555554 8
Q ss_pred hhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEE
Q 001304 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (1104)
Q Consensus 323 ~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 402 (1104)
.+++||+|||+.++....++.. +|.+++ +.+|++..+|+||.+++||||||||||+|+|++.++++.+..
T Consensus 290 AVAAIPEGLPaVvT~tLALG~~------rMakkn----aIVRkLPsVETLGc~~VICSDKTGTLTtN~Mtv~~i~~~~~~ 359 (972)
T KOG0202|consen 290 AVAAIPEGLPAVVTTTLALGTR------RMAKKN----AIVRKLPSVETLGCVNVICSDKTGTLTTNQMTVSKIFIPDGG 359 (972)
T ss_pred HHHhccCCCcchhhhhHHHhHH------HHHhhh----hhhhcccchhhccceeEEecCCCCcccccceEEEEEEecccc
Confidence 8899999998655544444444 777665 889999999999999999999999999999999999998765
Q ss_pred ecCCC-----Cc-------CCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcC
Q 001304 403 YGNET-----GD-------ALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLH 470 (1104)
Q Consensus 403 ~~~~~-----~~-------~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g 470 (1104)
+.... +. ...+...-.......+.+.+++...++||.+....++. ......|.|+|.||..++.+.|
T Consensus 360 ~~~~~~f~~tg~ty~~~g~v~~~~~~~~~~~~~~~~l~~l~~i~~lCNda~v~~~~~-~~~~~~G~pTE~AL~vlaeKm~ 438 (972)
T KOG0202|consen 360 TATVDEFNPTGTTYSPEGEVFKDGLYEKDKAGDNDLLQELAEICALCNDATVEYNDA-DCYEKVGEPTEGALIVLAEKMG 438 (972)
T ss_pred cccccccccCCceeCCCCceEecCccccccccccHHHHHHHHHHHhhhhhhhhcCch-hhHHhcCCchHHHHHHHHHHcC
Confidence 54431 10 00000000011223456889999999999988776554 3334479999999999999999
Q ss_pred cEEEeecCc-EEEEEe-CC-eeEEEEEEEEeccCCCCeeEEEEEEeCCC-CcEEEEecChHHhhhhhhcc-----C----
Q 001304 471 MVLVNKNAS-ILEIKF-NG-SVLQYEILETLEFTSDRKRMSVVVKDCHS-GNISLLSKGADEAILPYAHA-----G---- 537 (1104)
Q Consensus 471 ~~~~~~~~~-~~~~~~-~~-~~~~~~il~~~~F~s~rkrmsviv~~~~~-~~~~l~~KGa~e~i~~~~~~-----~---- 537 (1104)
+.-...... ...-+. +. -.+.++...++||+|+||+|||.+.++.+ ..+.+|+|||+|.|+++|.. +
T Consensus 439 l~~~~~~~~s~~~~~~c~~~~~~~~~~~~elpFssdrK~Msv~c~~~~~~~~~~~fvKGA~E~Vl~rcs~~~~~~g~~~~ 518 (972)
T KOG0202|consen 439 LPGTRSTNLSNEEASACNRVYSRLFKKIAELPFSSDRKSMSVKCSPAHGQSGYKMFVKGAPESVLERCSTYYGSDGQTKV 518 (972)
T ss_pred CCcchhhcccccccccchhHHHHhhhheeEeecccccceEEEEEecCCCCccceEEecCChHHHHHhhhcEEccCCceee
Confidence 754221100 000000 00 12345666999999999999999997643 34899999999999999952 1
Q ss_pred ----CchhHHHHHHHHHHhccceEEEEEEEecCH---HHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEee
Q 001304 538 ----QQTRTFVEAVEQYSQLGLRTLCLAWREVEE---DEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAI 610 (1104)
Q Consensus 538 ----~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~---~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i 610 (1104)
..++.+.+...+|+.+|||+|++|+++... ++...| ...+ +...|+||+|+|++||
T Consensus 519 pLt~~~re~il~~~~~~g~~gLRvLalA~~~~~~~~~~~~~l~---------~~s~--------~~~~E~~LtFvGlVGi 581 (972)
T KOG0202|consen 519 PLTQASRETILANVYEMGSEGLRVLALASKDSPGQVPDDQDLN---------DTSN--------RATAESDLTFVGLVGI 581 (972)
T ss_pred eCcHHHHHHHHHHHHHHhhccceEEEEEccCCcccChhhhhhc---------cccc--------ccccccceEEEEEeec
Confidence 124678999999999999999999997663 111110 0111 2467899999999999
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
.||+|++++++|+.|++|||+|.|+|||+.+||.+||++.|+...+.+..-..+.|.+.+++.
T Consensus 582 ~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~ed~~~~~~TG~efD~ls----------------- 644 (972)
T KOG0202|consen 582 LDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDEDVSSMALTGSEFDDLS----------------- 644 (972)
T ss_pred cCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCccccccccchhhhhcCC-----------------
Confidence 999999999999999999999999999999999999999999877653222234444333321
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
++..+ ....+..+|+|++|++|.+||+.||+.|++|+|+|||+||+|+||.|||||||
T Consensus 645 ----------------~~~~~-----~~~~~~~vFaR~~P~HK~kIVeaLq~~geivAMTGDGVNDApALK~AdIGIAM- 702 (972)
T KOG0202|consen 645 ----------------DEELD-----DAVRRVLVFARAEPQHKLKIVEALQSRGEVVAMTGDGVNDAPALKKADIGIAM- 702 (972)
T ss_pred ----------------HHHHH-----HHhhcceEEEecCchhHHHHHHHHHhcCCEEEecCCCccchhhhhhcccceee-
Confidence 11111 11345789999999999999999999999999999999999999999999999
Q ss_pred CCchHHHhh-hcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhcccc-chhhhHHHHHHH
Q 001304 771 GREGLQAAR-AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSG-TSLFNSVSLMAY 847 (1104)
Q Consensus 771 g~~~~~a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g-~~~~~~~~ll~~ 847 (1104)
|..|+++++ +||+||.|++|..++ .+.|||.+|+|+++++.|.+..|+.-....++ ....| +.+++++|+||+
T Consensus 703 G~~GTdVaKeAsDMVL~DDnFstIvaAVEEGr~IynNik~Fir~~lSsnVgev~~I~l----~aa~~~p~pL~pvQiLWi 778 (972)
T KOG0202|consen 703 GISGTDVAKEASDMVLADDNFSTIVAAVEEGRAIYNNIKNFIRYLLSSNVGEVVLIFL----TAAFGIPEPLIPVQILWI 778 (972)
T ss_pred cCCccHhhHhhhhcEEecCcHHHHHHHHHHhHHHHHHHHHHHHHHHhhhHHHHHHHHH----HHHhCCCCcccchhhhee
Confidence 877777766 999999999998887 47899999999999999998888754333332 22233 356899999999
Q ss_pred HHHhhhhhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeec--cc-c------
Q 001304 848 NVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAY--EK-S------ 918 (1104)
Q Consensus 848 nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~--~~-~------ 918 (1104)
|+++|++|+.++++| |++.++|++|| +..+..+++.+.+++++..|+|.++.........+.. .. +
T Consensus 779 NlvtDG~PA~aLG~e--p~D~DiM~kpP---R~~~~~iit~~l~~r~l~~g~~vg~~Tv~~f~~~~~~~~~~vt~~~~~~ 853 (972)
T KOG0202|consen 779 NLVTDGPPATALGFE--PVDPDIMKKPP---RDSKDGIITGWLIFRYLAIGIIVGVATVGVFVWWMYGADGKVTYRQLAH 853 (972)
T ss_pred eeeccCCchhhcCCC--CCChhHHhCCC---CCCCCCeeeHHHHHHHHHhheeeeeeEhHhhhHHHhcCCCCcChhhhcc
Confidence 999999999999998 69999999999 4788889999999998888888765544433322221 10 0
Q ss_pred -------------------cceeeeehhhhHHHHHHHHhhhhccccc---hHHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 001304 919 -------------------EMEEVSMVALSGCIWLQAFVVALETNSF---TVFQHLAIWGNLVAFYIINWIFSAIPSSGM 976 (1104)
Q Consensus 919 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~i~~sii~~~i~~~~~~~vp~~~~ 976 (1104)
...++.+..|+..=+++.++++.+..+. ..+.|.++.+++...++.++++.|+|.++
T Consensus 854 ~~~c~~~~~~~~c~~F~~~~~~tMa~tv~V~~emfNaL~~~se~~slf~~~~~~N~~l~~ai~~S~~~~f~ilYvp~l~- 932 (972)
T KOG0202|consen 854 YNSCCRDFYGSRCAVFEDMCPLTMALTVLVFIEMFNALNCLSENKSLFTMPPWSNRWLLWAIALSFVLHFLVLYVPPLQ- 932 (972)
T ss_pred hhhhcccccccchhhhcccccceEEEeehhHHHHHHHhhcccCCcceEEecccccHHHHHHHHHHHHhhheEEEechhh-
Confidence 0113444444444455556666655442 34667777778888889999999999887
Q ss_pred HHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Q 001304 977 YTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTYR 1015 (1104)
Q Consensus 977 ~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~~ 1015 (1104)
..|++.. ++..|+.++.+..-.++.++++|++.|.+.
T Consensus 933 --~iFq~~~l~~~ew~~vl~~s~~V~i~dEilK~~~R~~~ 970 (972)
T KOG0202|consen 933 --RIFQTEPLSLAEWLLVLAISSPVIIVDEILKFIARNYF 970 (972)
T ss_pred --hhheecCCcHHHHHHHHHHhhhhhhHHHHHHHHHHhcc
Confidence 3455543 899999999999999999999999998664
|
|
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-112 Score=1074.69 Aligned_cols=868 Identities=20% Similarity=0.226 Sum_probs=638.1
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~ 90 (1104)
+|+++||+|+++.++. ++| +.+++||.++++++++++++++++.. .+...+.++++++++++..++|+++
T Consensus 34 ~rl~~~G~N~l~~~~~~s~~----~~~l~q~~~~~~~iL~~aails~~~~-----~~~~~~iIl~vv~in~~i~~~QE~~ 104 (1053)
T TIGR01523 34 HRLKEVGENRLEADSGIDAK----AMLLHQVCNAMCMVLIIAAAISFAMH-----DWIEGGVISAIIALNILIGFIQEYK 104 (1053)
T ss_pred HHHHHcCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHh-----hHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5889999999999875 555 88999999999988888888887643 2223345566777888999999999
Q ss_pred Hhhh---hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeec
Q 001304 91 RYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (1104)
Q Consensus 91 ~~~~---~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~ 167 (1104)
+.++ .+++.+.+++|+|||++++|+++||||||||.|++||+||||++|+++++ +.||||+|||||.|+.|.+
T Consensus 105 aekal~aL~~l~~~~~~ViRdg~~~~I~a~eLVpGDIv~L~~Gd~VPAD~rLi~~~~----L~VDES~LTGES~pV~K~~ 180 (1053)
T TIGR01523 105 AEKTMDSLKNLASPMAHVIRNGKSDAIDSHDLVPGDICLLKTGDTIPADLRLIETKN----FDTDEALLTGESLPVIKDA 180 (1053)
T ss_pred HHHHHHHHhccCCCceEEEeCCeeeecCHhhCCCCCEEEECCCCEeeccEEEEEeCc----eEEEchhhcCCCCceeccc
Confidence 8875 45667789999999999999999999999999999999999999998776 9999999999999999964
Q ss_pred cccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcccc
Q 001304 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKL 247 (1104)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~ 247 (1104)
.... . .+.+....+..|++|+||.+.+| .+.|+|++||.+|.+
T Consensus 181 ~~~~------------------~------------------~~~~~~~~d~~n~lf~GT~V~~G-~g~~vVvatG~~T~~ 223 (1053)
T TIGR01523 181 HATF------------------G------------------KEEDTPIGDRINLAFSSSAVTKG-RAKGICIATALNSEI 223 (1053)
T ss_pred cccc------------------c------------------ccccCCcccCCCccccCceEEee-eEEEEEEEecCccHH
Confidence 2100 0 00011112567999999999998 699999999999999
Q ss_pred ccccCCC--------C------------------------------CCcChHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 001304 248 GMTRGIP--------E------------------------------PKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNV 289 (1104)
Q Consensus 248 ~~~~~~~--------~------------------------------~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 289 (1104)
|++.... + ...||+++.+++++.+++.+.+++++++++....
T Consensus 224 GkIa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tpLq~~l~~l~~~l~~i~~~~~~~~~~~~~~ 303 (1053)
T TIGR01523 224 GAIAAGLQGDGGLFQRPEKDDPNKRRKLNKWILKVTKKVTGAFLGLNVGTPLHRKLSKLAVILFCIAIIFAIIVMAAHKF 303 (1053)
T ss_pred HHHHHHHhhhhhccccccccccccchhhhcccccccccchhhccccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9875411 0 0148999999999998888777766655543210
Q ss_pred ccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCcccccccccc
Q 001304 290 WKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAIS 369 (1104)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~ 369 (1104)
..+...+..+ +.+++++||++||+.++++..++++ +|.+++ +++|+++++
T Consensus 304 -----------------~~~~~~~~~a---v~l~Va~VPegLp~~vti~La~g~~------rMak~~----~lVr~L~av 353 (1053)
T TIGR01523 304 -----------------DVDKEVAIYA---ICLAISIIPESLIAVLSITMAMGAA------NMSKRN----VIVRKLDAL 353 (1053)
T ss_pred -----------------hhhHHHHHHH---HHHHHHHcccchHHHHHHHHHHHHH------HHHhcC----CEeccchhh
Confidence 0112233322 3477899999999888887777776 666554 899999999
Q ss_pred ccccceEEEEecCCCCCCCcceEEEEEEEecE-EecCCC---------CcC--C--------C-----chhhhhh----h
Q 001304 370 EDLAQVEYILTDKTGTLTENRMIFRRCCIGGI-FYGNET---------GDA--L--------K-----DVGLLNA----I 420 (1104)
Q Consensus 370 E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~-~~~~~~---------~~~--~--------~-----~~~~~~~----~ 420 (1104)
|+||++++||+|||||||+|+|+|+++++++. .|.... ++. . . +.+.... .
T Consensus 354 EtLG~vtvICsDKTGTLT~N~M~V~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 433 (1053)
T TIGR01523 354 EALGAVNDICSDKTGTITQGKMIARQIWIPRFGTISIDNSDDAFNPNEGNVSGIPRFSPYEYSHNEAADQDILKEFKDEL 433 (1053)
T ss_pred hhccCccEEEecCcCccccceEEEEEEEEcCCceEEecCCCCCCCCcccccccccccccccccccccccccccccccccc
Confidence 99999999999999999999999999998752 221100 000 0 0 0000000 0
Q ss_pred c-----c--CCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEe---------ecC-cEEEE
Q 001304 421 T-----S--GSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN---------KNA-SILEI 483 (1104)
Q Consensus 421 ~-----~--~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~---------~~~-~~~~~ 483 (1104)
. . .++...+++.+.++||++....++++......|||+|.||+++|.+.|+.... ..+ ....+
T Consensus 434 ~~~~~~~~~~~~~~~~ll~~~~lcn~a~~~~~~~~~~~~~~GdptE~ALl~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~ 513 (1053)
T TIGR01523 434 KEIDLPEDIDMDLFIKLLETAALANIATVFKDDATDCWKAHGDPTEIAIHVFAKKFDLPHNALTGEEDLLKSNENDQSSL 513 (1053)
T ss_pred cccccccccccHHHHHHHHHHHhccCCeeeccCCCCceeeCcCccHHHHHHHHHHcCCCcccccchhhhhhhcccccccc
Confidence 0 0 11235678899999998776532211111236899999999999998874210 000 00000
Q ss_pred E---eCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC----C---------chhHHHHHH
Q 001304 484 K---FNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q---------QTRTFVEAV 547 (1104)
Q Consensus 484 ~---~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~----~---------~~~~~~~~~ 547 (1104)
+ ..+....|++++.+||||+|||||+++++++++++++|+|||||.|+++|+.. . ..+++.+++
T Consensus 514 ~~~~~~~~~~~~~~~~~~pFds~rK~msvv~~~~~~~~~~~~~KGApe~il~~c~~~~~~~~~~~~~l~~~~~~~i~~~~ 593 (1053)
T TIGR01523 514 SQHNEKPGSAQFEFIAEFPFDSEIKRMASIYEDNHGETYNIYAKGAFERIIECCSSSNGKDGVKISPLEDCDRELIIANM 593 (1053)
T ss_pred ccccccccccccceEEEeccCCCCCeEEEEEEeCCCCEEEEEEeCChHHHHHhhhHhhcCCCCccccCCHHHHHHHHHHH
Confidence 0 01124568999999999999999999997544468999999999999999631 0 135678889
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
++|+++|+|||++|||.++++++..+ .+.. ...+ .+.+|+||+|+|+++++||+|++++++|+.|++
T Consensus 594 ~~~a~~GlRvLa~A~r~l~~~~~~~~--~~~~---~~~~--------~~~~e~~L~~~G~~~~~Dp~r~~v~~aI~~l~~ 660 (1053)
T TIGR01523 594 ESLAAEGLRVLAFASKSFDKADNNDD--QLKN---ETLN--------RATAESDLEFLGLIGIYDPPRNESAGAVEKCHQ 660 (1053)
T ss_pred HHHHhcCCeEEEEEEEECCchhccch--hhhc---cccc--------hhhhccCCEEEEEEeeecCCchhHHHHHHHHHH
Confidence 99999999999999999987553211 1100 0001 135789999999999999999999999999999
Q ss_pred cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHH
Q 001304 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (1104)
Q Consensus 628 aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~ 707 (1104)
+||++||+|||++.||.++|+++||..++.. . .. .......+++|..++.+.+
T Consensus 661 aGIkv~MiTGD~~~tA~~iA~~~Gi~~~~~~----~-~~----------------------~~~~~~~vitG~~l~~l~~ 713 (1053)
T TIGR01523 661 AGINVHMLTGDFPETAKAIAQEVGIIPPNFI----H-DR----------------------DEIMDSMVMTGSQFDALSD 713 (1053)
T ss_pred CCCEEEEECCCCHHHHHHHHHHcCCCCcccc----c-cc----------------------cccccceeeehHHhhhcCH
Confidence 9999999999999999999999999764311 0 00 0001236888988876654
Q ss_pred HHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHH-Hhhhcceecc
Q 001304 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ-AARAADYSIG 786 (1104)
Q Consensus 708 ~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~-a~~~AD~vl~ 786 (1104)
+..+ ++ .....||||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |..|++ |+++||+++.
T Consensus 714 ~~l~---~~--~~~~~V~ar~sP~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdVGIAm-g~~gt~vak~aADivl~ 787 (1053)
T TIGR01523 714 EEVD---DL--KALCLVIARCAPQTKVKMIEALHRRKAFCAMTGDGVNDSPSLKMANVGIAM-GINGSDVAKDASDIVLS 787 (1053)
T ss_pred HHHH---HH--hhcCeEEEecCHHHHHHHHHHHHhcCCeeEEeCCCcchHHHHHhCCccEec-CCCccHHHHHhcCEEEe
Confidence 3222 21 234679999999999999999999999999999999999999999999999 654555 5569999999
Q ss_pred cchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccc--hhhhHHHHHHHHHHhhhhhhhhhhcc
Q 001304 787 KFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGT--SLFNSVSLMAYNVFYTSIPVLVSTID 862 (1104)
Q Consensus 787 ~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~--~~~~~~~ll~~nl~~~~lp~~~~~~~ 862 (1104)
++++ +..+ +.|||++|+|+++++.|.+++|+...++.+++.++..++|. .+++++|++|+|++++++|++++++|
T Consensus 788 dd~f~~I~~~-i~~gR~~~~ni~k~i~y~l~~ni~~i~~~~~~~~~~~~~g~~~~Pl~~~qiL~inli~d~~palaL~~e 866 (1053)
T TIGR01523 788 DDNFASILNA-IEEGRRMFDNIMKFVLHLLAENVAEAILLIIGLAFRDENGKSVFPLSPVEILWCIMITSCFPAMGLGLE 866 (1053)
T ss_pred cCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCCcCchHHHHHHHHHHHHHHHHHHhhccC
Confidence 8555 4554 69999999999999999999999988888888888777775 36899999999999999999998887
Q ss_pred CCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhhe-eec--cc-------------cc---ceee
Q 001304 863 KDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHV-YAY--EK-------------SE---MEEV 923 (1104)
Q Consensus 863 ~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~--~~-------------~~---~~~~ 923 (1104)
++++++|++||+ .+...+++..+++.++..+++.+++.+...+.. +.+ +. .. ..++
T Consensus 867 --~~~~~~m~~~Pr---~~~~~l~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~t~ 941 (1053)
T TIGR01523 867 --KAAPDLMDRLPH---DNEVGIFQKELIIDMFAYGFFLGGSCLASFTGILYGFGSGNLGHDCDAHYHAGCNDVFKARSA 941 (1053)
T ss_pred --CCChhHHhcCCC---CCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccccccccccccccccchhhhHHH
Confidence 689999999995 556678888888778888888776554433211 110 00 00 1223
Q ss_pred eehhhhHHHHHHHHhhhhcccc-ch-----------------HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc
Q 001304 924 SMVALSGCIWLQAFVVALETNS-FT-----------------VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS 985 (1104)
Q Consensus 924 ~~~~~~~~~~~~~~~~~~~~~~-~~-----------------~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~ 985 (1104)
.|.+++.+.+++.++++....+ |. .+.+..++.++++.+++++++.++|..+. .+|++.+
T Consensus 942 ~f~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~~--~~f~~~~ 1019 (1053)
T TIGR01523 942 AFATMTFCALILAVEVKDFDNSFFNLHGIPDGDSNFKEFFHSIVENKFLAWAIAFAAVSAFPTIYIPVIND--DVFKHKP 1019 (1053)
T ss_pred HHHHHHHHHHHHHHHHhcCchhhhhcCccccccccccccccCCccCHHHHHHHHHHHHHHHHHHhhhhhhh--hhhccCC
Confidence 3334444445555666554332 21 23566777777777778888888887641 1444443
Q ss_pred -CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 986 -QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 986 -~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
++ .|+.++.+.++.++...+.|+++|.+
T Consensus 1020 l~~-~w~~~~~~~~~~~~~~e~~K~~~r~~ 1048 (1053)
T TIGR01523 1020 IGA-EWGLAAAATIAFFFGAEIWKCGKRRL 1048 (1053)
T ss_pred cch-HHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 44 67777777777777788888887654
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-113 Score=977.72 Aligned_cols=831 Identities=21% Similarity=0.293 Sum_probs=621.6
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC----CcchhhHH---HHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN----PASTWGPL---IFIFAVSATK 83 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~----~~~~~~~l---~~i~~i~~~~ 83 (1104)
.|++.||+|.++..+. ++| .++||.|++..-++++++|++++..++...+ |+.+...+ ++|++++++.
T Consensus 127 ~Rr~~fG~N~~p~k~~K~Fl----~fvweA~qD~TLiIL~vaAvvSl~lgi~~~g~~~GW~eG~aI~~sV~~VV~VtA~n 202 (1034)
T KOG0204|consen 127 RRRKIFGSNTYPEKPPKGFL----RFVWEALQDVTLIILMVAAVVSLGLGIYTPGIEDGWIEGVAILLSVILVVLVTAVN 202 (1034)
T ss_pred HHHHhcCCCCCCCCCCccHH----HHHHHHhccchHHHHHHHHHHHHhhhhccCCCCcccccchhheeeEEEEEEEeecc
Confidence 4788999999999885 666 7799999999988888899988877665433 33333332 2333456665
Q ss_pred HHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCce
Q 001304 84 EAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLK 163 (1104)
Q Consensus 84 ~~~~d~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~ 163 (1104)
++-++.+=.+.+++..+.++.|+|||+.++|+..||+||||+.|+.||++||||+++++++ +.||||+|||||+++
T Consensus 203 Dy~qe~QF~~L~~~k~~~k~~ViR~G~r~~isI~diVVGDIv~lk~GDqvPADGvli~gn~----L~iDESSlTGESd~v 278 (1034)
T KOG0204|consen 203 DYRQELQFRKLQKEKRNIKFQVIRGGRRQQISIYDLVVGDIVQLKIGDQVPADGVLIQGNS----LKIDESSLTGESDHV 278 (1034)
T ss_pred hhHHhhhhhhhhhhhhceEEEEEECCEEEEEEEeeeeeccEEEeecCCccccceEEEeccc----eeEecccccCCCcce
Confidence 5544444444556667789999999999999999999999999999999999999998887 999999999999999
Q ss_pred EeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecC
Q 001304 164 TRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGN 243 (1104)
Q Consensus 164 ~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~ 243 (1104)
.|.+ +.+-++++||++.+| .+.++|+.+|.
T Consensus 279 ~k~~-------------------------------------------------~~dPfLlSGTkv~eG-sgkMlVTaVGm 308 (1034)
T KOG0204|consen 279 QKSL-------------------------------------------------DKDPFLLSGTKVMEG-SGKMLVTAVGM 308 (1034)
T ss_pred eccC-------------------------------------------------CCCCeEeecceeecC-cceEEEEEeee
Confidence 9832 345689999999998 79999999999
Q ss_pred ccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhc---ccccccc-cccc-ceeeccCCCcchhhhhhh
Q 001304 244 ETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTA---GNVWKDT-EARK-QWYVLYPQEFPWYELLVI 315 (1104)
Q Consensus 244 ~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~---~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~ 315 (1104)
+|..|++.. ......+|+|-.+++++..+..+.++++.+..++ .++.... ..+. .|-. .....+.++-
T Consensus 309 nt~wG~~m~~l~~~~~e~tpLQ~kL~~lA~~Igk~Gl~~A~~~~~VL~~r~~~~~~~~~~~~~~~~----~~~~~~~~v~ 384 (1034)
T KOG0204|consen 309 NTQWGIIMTLLGAGGEEETPLQVKLNGLATQIGKIGLLFAALTFIVLVIRFFIGKTKIEGGTGTTW----SDEYIQEFVK 384 (1034)
T ss_pred cchHhhHHHhhhcCCCcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeeecCCCCCccc----cHHHHHHHHH
Confidence 999998654 3444789999999999887766665555443332 1111110 0000 0100 0011222222
Q ss_pred HHHH-HHhhhccccchhH--HHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceE
Q 001304 316 PLRF-ELLCSIMIPISIK--VSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMI 392 (1104)
Q Consensus 316 ~~~~-~~l~~~~iP~~L~--v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~ 392 (1104)
++.+ ..+++.++|+||| ||+++++.+. +|.+++ .++|.+++||++|..+.||+|||||||.|+|+
T Consensus 385 ~f~i~VTilVVAVPEGLPLAVTLsLAys~k--------kMmkD~----~LVRhL~ACETMGsAT~ICsDKTGTLT~N~Mt 452 (1034)
T KOG0204|consen 385 FFIIAVTILVVAVPEGLPLAVTLSLAYSMK--------KMMKDN----NLVRHLDACETMGSATAICSDKTGTLTTNRMT 452 (1034)
T ss_pred HhhheeEEEEEECCCCccHHHHHHHHHHHH--------HHhcch----hHHHHhHHHhhcCCceEEEecCcCceEeeeEE
Confidence 2222 1267889999986 5566665554 555554 77999999999999999999999999999999
Q ss_pred EEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHH-HHHHHhhhcccccccCCC-CceeeecCCccHHHHHHHHHhcC
Q 001304 393 FRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIR-FLTVMAVCNTVIPAKSKA-GAILYKAQSQDEEALVHAAAQLH 470 (1104)
Q Consensus 393 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lalc~~~~~~~~~~-~~~~~~~~~p~e~Al~~~a~~~g 470 (1104)
+.+.|+++..|..+..+. ..-++.+.+ ++.+++...+.....++. |....+.|||+|.||+.++.++|
T Consensus 453 VV~~~~~~~~~k~~~~~~----------~~l~~~~~~ll~~gI~~Nt~g~v~~~~~~g~~~~~~GspTE~AlL~f~~~LG 522 (1034)
T KOG0204|consen 453 VVQSYIGSEHYKVNSPKS----------SNLPPSLLDLLLQGIAQNTTGSVVKPEKGGEQPEQLGSPTECALLGFGLKLG 522 (1034)
T ss_pred EEeeeeccccccccCccc----------ccCCHHHHHHHHHHHhhcCCCeEEecCCCCcCccccCCHHHHHHHHHHHHhC
Confidence 999999998876433221 112233333 344555554443333333 32345689999999999999999
Q ss_pred cEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc------------CC
Q 001304 471 MVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA------------GQ 538 (1104)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~------------~~ 538 (1104)
.++ +..+.+.++.+++||+|+||+|+++++.++++.| +|+|||.|.++.+|.. ++
T Consensus 523 ~~~------------~~~R~e~~v~kv~~FNS~kK~~gvvi~~~~~~~y-~~~KGAsEiVL~~C~~~~~~~g~~~~~~e~ 589 (1034)
T KOG0204|consen 523 MDF------------QDVRPEEKVVKVYPFNSVKKRMGVVIKLPDGGHY-VHWKGASEIVLKSCEYYIDSNGELVPFNED 589 (1034)
T ss_pred cch------------HhhcchhheeEEeccCcccceeeEEEEcCCCCeE-EEEcChHHHHHHhhhheECCCCCEeeCCHH
Confidence 876 3445667899999999999999999998855555 9999999999999973 12
Q ss_pred chhHHHHHHHHHHhccceEEEEEEEecCHH--HHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCC
Q 001304 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEED--EYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQD 616 (1104)
Q Consensus 539 ~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~--e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~ 616 (1104)
....+++.++.||++||||+|+|||+.... +..+|.. .+..+.+|+++|++||+||.||
T Consensus 590 ~~~~~~~~Ie~mA~~~LRti~lAy~df~~~~~~~~~~~~-------------------~~~~~~~lt~laivGIkDPvRP 650 (1034)
T KOG0204|consen 590 DRKSFKDVIEPMASEGLRTICLAYRDFVAGPDEEPSWDN-------------------EELPEGGLTLLAIVGIKDPVRP 650 (1034)
T ss_pred HHHHHHHHHHHHHHhhhheeeEEeeccccCCCCCCCccc-------------------cccCCCCeEEEEEeeccCCCCC
Confidence 234688999999999999999999995433 1112211 1356789999999999999999
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEE
Q 001304 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFV 696 (1104)
Q Consensus 617 ~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv 696 (1104)
||+++|+.|++|||.|.|+||||..||.+||.+|||++++.+ ...++|.+..
T Consensus 651 gV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~eCGILt~~~d--~~~lEG~eFr-------------------------- 702 (1034)
T KOG0204|consen 651 GVPEAVQLCQRAGITVRMVTGDNINTAKAIARECGILTPGGD--FLALEGKEFR-------------------------- 702 (1034)
T ss_pred CcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHHHcccccCCCc--cceecchhhh--------------------------
Confidence 999999999999999999999999999999999999998765 4445554433
Q ss_pred EcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 697 VDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 697 i~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
.+.++.+. ....+-.|.+|.+|.+|..+|+.|++.|++|+++|||.||+|||++||||.|| |-+|++
T Consensus 703 -------~~s~ee~~-----~i~pkl~VlARSSP~DK~lLVk~L~~~g~VVAVTGDGTNDaPALkeADVGlAM-GIaGTe 769 (1034)
T KOG0204|consen 703 -------ELSQEERD-----KIWPKLRVLARSSPNDKHLLVKGLIKQGEVVAVTGDGTNDAPALKEADVGLAM-GIAGTE 769 (1034)
T ss_pred -------hcCHHHHH-----hhhhhheeeecCCCchHHHHHHHHHhcCcEEEEecCCCCCchhhhhcccchhc-cccchh
Confidence 22222111 22455689999999999999999999999999999999999999999999999 888887
Q ss_pred Hhh-hcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhh
Q 001304 777 AAR-AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSI 854 (1104)
Q Consensus 777 a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~l 854 (1104)
+++ +||++|+|++|.+.. .+.|||..|.+++|+++|++.-|++..++.|.-+. .+|.+|++++||||+|++||.|
T Consensus 770 VAKEaSDIIi~DDNFssIVk~v~WGR~VY~nIqKFiQFQLTVNVvAliv~fv~A~---~~~dsPLtAVQlLWVNLIMDTL 846 (1034)
T KOG0204|consen 770 VAKEASDIIILDDNFSSIVKAVKWGRNVYDNIQKFLQFQLTVNVVALIVNFVSAC---ATGDSPLTAVQLLWVNLIMDTL 846 (1034)
T ss_pred hhhhhCCeEEEcCchHHHHHHHHhhhHHHHHHHHhheeEEEEEEEeehhhhhhhh---hcCCccHHHHHHHHHHHHHHHH
Confidence 776 999999999998776 57999999999999999999999875555544333 4567899999999999999999
Q ss_pred hhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheee----ccc-----ccceeeee
Q 001304 855 PVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA----YEK-----SEMEEVSM 925 (1104)
Q Consensus 855 p~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~----~~~-----~~~~~~~~ 925 (1104)
.+++++.| ||.+.+|++|| +||+..+++..||.+.+++++||-+++|.+.+..-. ... ....|.-|
T Consensus 847 gALALATe--pPt~~Lm~RkP---~GR~~~LIt~tMwknil~qa~YQl~vl~iL~F~G~~if~~~~~~~~~~~~~nTiIF 921 (1034)
T KOG0204|consen 847 GALALATE--PPTDELMKRKP---VGRTKPLITRTMWKNILGQAVYQLIVLFILNFAGKSIFGLNGPLHSPPSVHNTIIF 921 (1034)
T ss_pred HHHHhccC--CCChHHhcCCC---CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCCCCCchhhheeeeh
Confidence 99999998 47777999998 699999999999999999999999999988764322 111 12235555
Q ss_pred hhhhHHHHHHHHhhhhccccchHH----HHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHH
Q 001304 926 VALSGCIWLQAFVVALETNSFTVF----QHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAG 1000 (1104)
Q Consensus 926 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~ 1000 (1104)
.+|+.|.+|+-++.+-. +..+++ ++..+.+.+.+.++++.++..+ .+ .++.+.. ++..|++++++.++.
T Consensus 922 NtFV~~qvFNEinaRki-~~~NvFkgi~~N~~F~~ii~~T~v~QviIveF--~g---~~~st~~L~~~qWl~ci~~g~~s 995 (1034)
T KOG0204|consen 922 NTFVFCQVFNEINARKI-DERNVFKGIFRNRLFCVIITITVVSQVIIVEF--GG---AFFSTTPLSLTQWLWCIFIGVLS 995 (1034)
T ss_pred hHHHHHHHHHHHhhcch-hHHhHHHHHhcCceEEEEeeeeeehhhhhhhh--cC---cceeeecccHHHHHHHHHHHHHH
Confidence 55555555555555421 222332 3333333344444454443322 22 2233322 899999999999888
Q ss_pred HHHHHHHHHHHHh
Q 001304 1001 MGPIVALKYFRYT 1013 (1104)
Q Consensus 1001 llp~~i~k~~~~~ 1013 (1104)
++.-.+.|.+...
T Consensus 996 l~~g~~ik~iP~~ 1008 (1034)
T KOG0204|consen 996 LPWGQLLKCIPVS 1008 (1034)
T ss_pred HHHHHHheecccc
Confidence 8888888876443
|
|
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-110 Score=1060.43 Aligned_cols=867 Identities=19% Similarity=0.237 Sum_probs=640.7
Q ss_pred ccccCCCCceeecCCCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccc--------cCCcchhhHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--------VNPASTWGPLIFIFAVSAT 82 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~-~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~--------~~~~~~~~~l~~i~~i~~~ 82 (1104)
+|+++||+|+++.++.+ +| +.|++||.+++++.++++++++++..... .+.+...++++++++++++
T Consensus 44 ~rl~~~G~N~l~~~~~~~~~----~~~l~~~~~~~~~iL~~aa~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 119 (997)
T TIGR01106 44 EILARDGPNALTPPPTTPEW----VKFCRQLFGGFSMLLWIGAILCFLAYGIQASTEEEPQNDNLYLGVVLSAVVIITGC 119 (997)
T ss_pred HHHHHhCCCCCCCCCCCCHH----HHHHHHHhcchHHHHHHHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHHHHH
Confidence 58899999999887654 54 88999999999998888888866532110 0122333567778888999
Q ss_pred HHHHHHHHHhhhhHhhc---ceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCC
Q 001304 83 KEAWDDYNRYLSDKKAN---EKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1104)
Q Consensus 83 ~~~~~d~~~~~~~~~~n---~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGE 159 (1104)
+++++++|+++++++++ +.+++|+|||++++|+++||||||+|.|++||.|||||+|+++++ +.||||+||||
T Consensus 120 i~~~qe~ka~~~l~~l~~~~~~~~~ViRdg~~~~I~~~~lv~GDiv~l~~Gd~IPaD~~il~~~~----l~VdeS~LTGE 195 (997)
T TIGR01106 120 FSYYQEAKSSKIMESFKNMVPQQALVIRDGEKMSINAEQVVVGDLVEVKGGDRIPADLRIISAQG----CKVDNSSLTGE 195 (997)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEeeHHHCCCCCEEEECCCCEEeeeEEEEEccC----cEEEccccCCC
Confidence 99999999988766554 569999999999999999999999999999999999999997654 89999999999
Q ss_pred CCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
|.|+.|.+.. ....|++.+|++|+||.+.+| ++.|+|+
T Consensus 196 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~l~~Gt~v~~G-~~~~~V~ 233 (997)
T TIGR01106 196 SEPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TARGIVV 233 (997)
T ss_pred CCceeccCCC-----------------------------------------cccCccccCCeEEeccEeeee-eEEEEEE
Confidence 9999996421 112345778999999999998 7999999
Q ss_pred EecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhH
Q 001304 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIP 316 (1104)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1104)
+||.+|++|++.+ ..+.+++|+++.+++++..+..+.+++++++++++... ...|.+.+..+
T Consensus 234 ~tG~~T~~g~i~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 298 (997)
T TIGR01106 234 NTGDRTVMGRIASLASGLENGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLIL---------------GYTWLEAVIFL 298 (997)
T ss_pred EccccchhhHHHhhhhhcccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCHHHHHHHH
Confidence 9999999999876 44566799999999999887777666665544433111 11334444333
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEE
Q 001304 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (1104)
Q Consensus 317 ~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 396 (1104)
+ .+++.++|++|+++++++...++. +|.+. ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 299 i---~v~v~~iP~~L~~~v~i~l~~~~~------~m~~~----~ilvk~~~aiE~lg~v~~ic~DKTGTLT~n~m~v~~~ 365 (997)
T TIGR01106 299 I---GIIVANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 365 (997)
T ss_pred H---HHHhhcCCccchHHHHHHHHHHHH------HHHHC----CcEecCcHHHHHhcCCCEEEECCCCceecCceEEEEE
Confidence 3 356677999999988888887766 44433 4899999999999999999999999999999999999
Q ss_pred EEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCc---eeeecCCccHHHHHHHHHhcCcEE
Q 001304 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~---~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
++++..|..+..+.... . ...........++.++++||++.+..+.++. -.+..+||+|.||++++.+.+...
T Consensus 366 ~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~ll~~~alcn~~~~~~~~~~~~~~~~~~~gdp~E~ALl~~a~~~~~~~ 441 (997)
T TIGR01106 366 WFDNQIHEADTTEDQSG-V---SFDKSSATWLALSRIAGLCNRAVFKAGQENVPILKRAVAGDASESALLKCIELCLGSV 441 (997)
T ss_pred EECCeEEecCCccCCCC-c---cCCcccHHHHHHHHHHHHcCCCeeccccCCCcccccccCcChHHHHHHHHHHHhCCCH
Confidence 99887775432111100 0 0011123344688899999988765432221 124468999999999998644321
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeC--CCCcEEEEecChHHhhhhhhcc----CC-------ch
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHA----GQ-------QT 540 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~--~~~~~~l~~KGa~e~i~~~~~~----~~-------~~ 540 (1104)
.+.+..|+.++.+||+|+||||+++++.. +++++++|+|||||.|+++|+. +. ..
T Consensus 442 ------------~~~~~~~~~v~~~pF~s~rK~m~~v~~~~~~~~~~~~~~~KGApe~Il~~c~~~~~~g~~~~l~~~~~ 509 (997)
T TIGR01106 442 ------------MEMRERNPKVVEIPFNSTNKYQLSIHENEDPRDPRHLLVMKGAPERILERCSSILIHGKEQPLDEELK 509 (997)
T ss_pred ------------HHHHhhCceeEEeccCCCCceEEEEEeccCCCCceEEEEEeCChHHHHHHhhHHhcCCCcccCCHHHH
Confidence 12244678899999999999999988642 2356899999999999999962 11 13
Q ss_pred hHHHHHHHHHHhccceEEEEEEEecCHHHHHH-HHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChH
Q 001304 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQE-WSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVP 619 (1104)
Q Consensus 541 ~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~-~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~ 619 (1104)
+.+.+++++|+++|+|||++|||.++++++++ |.. +++ ..+..|+||+|+|+++++||+|++++
T Consensus 510 ~~~~~~~~~~a~~GlRvla~A~k~l~~~~~~~~~~~----------~~~-----~~~~~e~~L~flGli~i~Dplr~~v~ 574 (997)
T TIGR01106 510 EAFQNAYLELGGLGERVLGFCHLYLPDEQFPEGFQF----------DTD-----DVNFPTDNLCFVGLISMIDPPRAAVP 574 (997)
T ss_pred HHHHHHHHHHHhcCCEEEEEEEeecCcccccccccc----------cch-----hhhccccCcEEEEEEeccCCChHHHH
Confidence 45788899999999999999999998655432 110 000 01244899999999999999999999
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
++|++|+++||+++|+|||++.||.++|+++|+++++.. ..+++.+.+....+. .+..+...++++|
T Consensus 575 ~aI~~l~~~Gi~v~~~TGd~~~ta~~ia~~~gi~~~~~~---------~~~~i~~~~~~~~~~----~~~~~~~~~vi~G 641 (997)
T TIGR01106 575 DAVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE---------TVEDIAARLNIPVSQ----VNPRDAKACVVHG 641 (997)
T ss_pred HHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCcc---------chhhhhhhccccccc----cccccccceEEEh
Confidence 999999999999999999999999999999999876532 011111111100000 0112233589999
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA- 778 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~- 778 (1104)
.+++.+.++ .+.++...+...||||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |+.|++++
T Consensus 642 ~~l~~l~~~---el~~~~~~~~~~VfaR~sPeqK~~IV~~lq~~g~vv~~~GDG~ND~paLk~AdVGiam-g~~G~~vak 717 (997)
T TIGR01106 642 SDLKDMTSE---QLDEILKYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDVSK 717 (997)
T ss_pred HHhhhCCHH---HHHHHHHhcCCEEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHhhCCcceec-CCcccHHHH
Confidence 999876553 2333333334579999999999999999999999999999999999999999999999 76666654
Q ss_pred hhcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhh
Q 001304 779 RAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVL 857 (1104)
Q Consensus 779 ~~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~ 857 (1104)
++||+++.+++|.... ++.|||++|.|+++++.|.+++|+...++.+++.++. +..+++++|++|+|+++|++|++
T Consensus 718 ~aADivL~dd~f~~Iv~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qlL~inli~d~lp~~ 794 (997)
T TIGR01106 718 QAADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLIFIIAN---IPLPLGTITILCIDLGTDMVPAI 794 (997)
T ss_pred HhhceEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHc---CcchhHHHHHHHHHHHHHHHHHH
Confidence 5899999986664443 3699999999999999999999999888888877653 34578999999999999999999
Q ss_pred hhhccCCCCchhhccCCccccccccCcccCchhhHHHHH-HHHHHHHHHHHHhhheee---------ccc----c-----
Q 001304 858 VSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYA---------YEK----S----- 918 (1104)
Q Consensus 858 ~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~---------~~~----~----- 918 (1104)
++++| ++++.+|++||+ ..+.+.+++..+++.+++ .+++++++.++..+..+. +.. .
T Consensus 795 al~~e--~~~~~~m~~~P~--~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 870 (997)
T TIGR01106 795 SLAYE--KAESDIMKRQPR--NPKTDKLVNERLISMAYGQIGMIQALGGFFTYFVILAENGFLPLHLVGLRVQWDDRWIN 870 (997)
T ss_pred HHhcC--CCCcccccCCCc--CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcccccccccccccccccc
Confidence 98887 588889998885 234668888888877665 577887766554432110 000 0
Q ss_pred ----c------ce-------eeeehhhhHH---HHHHHHhhhhcccc-ch-HHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 001304 919 ----E------ME-------EVSMVALSGC---IWLQAFVVALETNS-FT-VFQHLAIWGNLVAFYIINWIFSAIPSSGM 976 (1104)
Q Consensus 919 ----~------~~-------~~~~~~~~~~---~~~~~~~~~~~~~~-~~-~~~~~~i~~sii~~~i~~~~~~~vp~~~~ 976 (1104)
. .. .+.+..|..+ .+++.++++....+ |. .+.+..++.++++.++++++..++|.++
T Consensus 871 ~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~R~~~~~~f~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~- 949 (997)
T TIGR01106 871 DLEDSYGQEWTYEQRKYVEFTCHTAFFVSIVVVQWADLIICKTRRNSVFQQGMKNKILIFGLFEETALAAFLSYCPGMG- 949 (997)
T ss_pred ccccccccccchhcccchhhhhhHHHHHHHHHHHHHHHHHhccCcccccccCCcCHHHHHHHHHHHHHHHHHHHhhhhH-
Confidence 0 00 1233444444 44455566654333 31 1445666666666666666667777654
Q ss_pred HHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 977 YTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 977 ~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
.++++.+ ++.+|+.++.+.++.++...+.|++++.+
T Consensus 950 --~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~r~~ 986 (997)
T TIGR01106 950 --VALRMYPLKPTWWFCAFPYSLLIFVYDEIRKLIIRRN 986 (997)
T ss_pred --HHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3455543 78889888888888877778888887653
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.2e-107 Score=1028.02 Aligned_cols=845 Identities=21% Similarity=0.270 Sum_probs=623.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcccccc-----CCcchhhHHHHHHHHHHHHHHHHHHHHhhhh---HhhcceEEEEEEC
Q 001304 37 LWEQFSRFMNQYFLLIACLQLWSLITPV-----NPASTWGPLIFIFAVSATKEAWDDYNRYLSD---KKANEKEVWVVKQ 108 (1104)
Q Consensus 37 l~~qf~~~~n~~~l~~~~l~~~~~~~~~-----~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~---~~~n~~~~~V~r~ 108 (1104)
+++||+++++++++++++++++....+. ..+...+.++++++++++..+++++++.++. +++.+.+++|+||
T Consensus 1 ~~~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~Il~vi~~~~~i~~~qe~~a~~~~~~L~~~~~~~~~ViRd 80 (917)
T TIGR01116 1 VLEQFEDLLVRILLLAACVSFVLAWFEEGEETVTAFVEPFVILLILVANAIVGVWQERNAEKAIEALKEYESEHAKVLRD 80 (917)
T ss_pred ChHHHhCHHHHHHHHHHHHHHHHhcccccccccccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCceEEEEC
Confidence 4789999999999999999998754331 1122223444666678888999999987754 4456789999999
Q ss_pred CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEe
Q 001304 109 GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIEC 188 (1104)
Q Consensus 109 g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~ 188 (1104)
|++++|+++||||||||.|++||.|||||+|+++++ |.||||+|||||.|+.|.+...
T Consensus 81 g~~~~I~~~~Lv~GDiv~l~~Gd~IPaD~~ll~~~~----l~VdeS~LTGES~pv~K~~~~~------------------ 138 (917)
T TIGR01116 81 GRWSVIKAKDLVPGDIVELAVGDKVPADIRVLSLKT----LRVDQSILTGESVSVNKHTESV------------------ 138 (917)
T ss_pred CEEEEEEHHHCCCCCEEEECCCCEeeccEEEEEecc----eEEEcccccCCCCccccccccc------------------
Confidence 999999999999999999999999999999997765 9999999999999999964210
Q ss_pred cCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccC---CCCCCcChHHHHH
Q 001304 189 PGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMI 265 (1104)
Q Consensus 189 ~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~ 265 (1104)
| +++..+.+.+|++|+||.+.+| ++.++|++||.+|++|++.+ ..+.+++++++.+
T Consensus 139 --~------------------~~~~~~~~~~n~l~~GT~v~~G-~~~~~V~~tG~~T~~gki~~~~~~~~~~~t~lq~~l 197 (917)
T TIGR01116 139 --P------------------DERAVNQDKKNMLFSGTLVVAG-KARGVVVRTGMSTEIGKIRDEMRAAEQEDTPLQKKL 197 (917)
T ss_pred --C------------------ccccCcccccceeeeCCEEecc-eEEEEEEEeCCCCHHHHHHHHhhccCCCCCCHHHHH
Confidence 0 1111234678999999999998 79999999999999998543 5567789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHH-HHHHhhhccccchhHHHHHHHHHHHHH
Q 001304 266 DKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL-RFELLCSIMIPISIKVSLDLVKSLYAK 344 (1104)
Q Consensus 266 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~iP~~L~v~l~l~~~~~~~ 344 (1104)
++++..++.+.++++++.++++..+ |........|...+...+ ..+.+++.++|++|+++++++...++.
T Consensus 198 ~~~~~~l~~~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~i~l~v~~iP~~Lp~~vti~l~~~~~ 268 (917)
T TIGR01116 198 DEFGELLSKVIGLICILVWVINIGH---------FNDPALGGGWIQGAIYYFKIAVALAVAAIPEGLPAVITTCLALGTR 268 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH---------hccccccchhHHHHHHHHHHHHhhhhhccccccHHHHHHHHHHHHH
Confidence 9998887776666655544432111 000000112222222111 223477889999999999999888887
Q ss_pred HhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCC-----CCcCCCc-hhhhh
Q 001304 345 FIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNE-----TGDALKD-VGLLN 418 (1104)
Q Consensus 345 ~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~-----~~~~~~~-~~~~~ 418 (1104)
+|.++ ++++|+++++|+||++++||||||||||+|+|+|++++..+..+... .+..... .+..+
T Consensus 269 ------~m~~~----~ilvk~~~~iE~lg~v~~ic~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (917)
T TIGR01116 269 ------KMAKK----NAIVRKLPSVETLGCTTVICSDKTGTLTTNQMSVCKVVALDPSSSSLNEFCVTGTTYAPEGGVIK 338 (917)
T ss_pred ------HHHHC----CcEecCcHHHHhccCceEEEecCCccccCCeEEEEEEEecCCcccccceEEecCCccCCCccccc
Confidence 44433 38899999999999999999999999999999999998765321000 0000000 00000
Q ss_pred h---h-ccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCC----eeE
Q 001304 419 A---I-TSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNG----SVL 490 (1104)
Q Consensus 419 ~---~-~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~----~~~ 490 (1104)
. . ...++...+++.++++||++....++++......+||+|.||++++.+.|+....+..+.......+ ...
T Consensus 339 ~~~~~~~~~~~~~~~l~~~~~lc~~~~~~~~~~~~~~~~~gdp~E~ALl~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 418 (917)
T TIGR01116 339 DDGPVAGGQDAGLEELATIAALCNDSSLDFNERKGVYEKVGEATEAALKVLVEKMGLPATKNGVSSKRRPALGCNSVWND 418 (917)
T ss_pred cCCcccccchHHHHHHHHHHHhcCCCeeeccccCCceeeccChhHHHHHHHHHHcCCCchhcccccccccccchhHHHHh
Confidence 0 0 0012335678889999999876543222111125899999999999999886654433332222222 235
Q ss_pred EEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc-----CC-------chhHHHHHHHHHHh-ccceE
Q 001304 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFVEAVEQYSQ-LGLRT 557 (1104)
Q Consensus 491 ~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~-----~~-------~~~~~~~~~~~~a~-~GlR~ 557 (1104)
.|++++.+||||+|||||++++. ++++.+|+|||||.|+++|+. +. ..+++.+++++|++ +|+||
T Consensus 419 ~~~~~~~~pF~s~rK~msviv~~--~~~~~~~~KGApe~il~~c~~~~~~~g~~~~l~~~~~~~i~~~~~~~a~~~GlRv 496 (917)
T TIGR01116 419 KFKKLATLEFSRDRKSMSVLCKP--STGNKLFVKGAPEGVLERCTHILNGDGRAVPLTDKMKNTILSVIKEMGTTKALRC 496 (917)
T ss_pred hcceeeecccChhhCeEEEEEee--CCcEEEEEcCChHHHHHhccceecCCCCeeeCCHHHHHHHHHHHHHHHhhcCCeE
Confidence 68899999999999999999986 467899999999999999963 11 13457888999999 99999
Q ss_pred EEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcC
Q 001304 558 LCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTG 637 (1104)
Q Consensus 558 l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTG 637 (1104)
|++|||.+++++.. +. ..+ ....+.+|+||+|+|+++++||+|++++++|+.|+++||++||+||
T Consensus 497 l~~A~k~~~~~~~~-~~---------~~~-----~~~~~~~e~~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTG 561 (917)
T TIGR01116 497 LALAFKDIPDPREE-DL---------LSD-----PANFEAIESDLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITG 561 (917)
T ss_pred EEEEEEECCccccc-cc---------ccc-----chhhhhhcCCcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecC
Confidence 99999999764321 00 000 0123568999999999999999999999999999999999999999
Q ss_pred CCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHh
Q 001304 638 DKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELA 717 (1104)
Q Consensus 638 D~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~ 717 (1104)
|+.+||.++|+++|+..++.+ +. ...++|..++.+.++. . ..
T Consensus 562 D~~~tA~~ia~~~gi~~~~~~--v~-------------------------------~~~~~g~~l~~~~~~~---~--~~ 603 (917)
T TIGR01116 562 DNKETAEAICRRIGIFSPDED--VT-------------------------------FKSFTGREFDEMGPAK---Q--RA 603 (917)
T ss_pred CCHHHHHHHHHHcCCCCCCcc--cc-------------------------------ceeeeHHHHhhCCHHH---H--HH
Confidence 999999999999999765432 10 1123444433322111 1 12
Q ss_pred hhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc--chhhHHHH
Q 001304 718 ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK--FRFLKRLI 795 (1104)
Q Consensus 718 ~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~--f~~l~~ll 795 (1104)
..++..||||++|+||.++|+.+|+.|++|+|+|||.||+|||++|||||+| |+..+.++++||+++.+ |+.+..+
T Consensus 604 ~~~~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG~ND~~alk~AdVGia~-g~g~~~ak~aAD~vl~dd~f~~i~~~- 681 (917)
T TIGR01116 604 ACRSAVLFSRVEPSHKSELVELLQEQGEIVAMTGDGVNDAPALKKADIGIAM-GSGTEVAKEASDMVLADDNFATIVAA- 681 (917)
T ss_pred hhhcCeEEEecCHHHHHHHHHHHHhcCCeEEEecCCcchHHHHHhCCeeEEC-CCCcHHHHHhcCeEEccCCHHHHHHH-
Confidence 2456789999999999999999999999999999999999999999999999 54333455699999998 4455655
Q ss_pred HhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCc
Q 001304 796 LVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQ 875 (1104)
Q Consensus 796 l~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~ 875 (1104)
+.|||++|+|+++++.|.+++|+...++++++.++. ...+|+++|++|+|++++++|++++++| ++++.+|++||
T Consensus 682 i~~GR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qll~inli~d~lp~~~l~~~--~~~~~~m~~pP 756 (917)
T TIGR01116 682 VEEGRAIYNNMKQFIRYMISSNIGEVVCIFLTAALG---IPEGLIPVQLLWVNLVTDGLPATALGFN--PPDKDIMWKPP 756 (917)
T ss_pred HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHc---CCchHHHHHHHHHHHHHHHHHHHHHhcC--CcchhHhcCCC
Confidence 599999999999999999999998888888776642 2357999999999999999999988887 47789999999
Q ss_pred cccccccCcccCchhhHHHHHHHHHHHHHHHHHhhhee---ecc-----------------------cccceeeeehhhh
Q 001304 876 ILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVY---AYE-----------------------KSEMEEVSMVALS 929 (1104)
Q Consensus 876 ~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~-----------------------~~~~~~~~~~~~~ 929 (1104)
+ .+.+++++.++++.|++.|++++++.++..++.+ ++. .....|+.|.+++
T Consensus 757 ~---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v 833 (917)
T TIGR01116 757 R---RPDEPLITGWLFFRYLVVGVYVGLATVGGFVWWYLLTHFTGCDEDSFTTCPDFEDPDCYVFEGKQPARTISLSVLV 833 (917)
T ss_pred C---CCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcccccccccccccccccccccccccccchHHHHHHHHH
Confidence 4 6678899999999999999999977443322211 110 0011234455555
Q ss_pred HHHHHHHHhhhhcccc-ch--HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHH
Q 001304 930 GCIWLQAFVVALETNS-FT--VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIV 1005 (1104)
Q Consensus 930 ~~~~~~~~~~~~~~~~-~~--~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~ 1005 (1104)
.+.+++.|+++....+ |. .+.+..+|+++++.+++++++.++|+++ .++++.+ ++..|+.++.+.++.++...
T Consensus 834 ~~q~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~~v~~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~e 910 (917)
T TIGR01116 834 VIEMFNALNALSEDQSLLRMPPWVNKWLIGAICLSMALHFLILYVPFLS---RIFGVTPLSLTDWLMVLKLSLPVILVDE 910 (917)
T ss_pred HHHHHHHHHHcCCcccccccCCccCHHHHHHHHHHHHHHHHHHHhHHHH---HHhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 6666667777775444 32 2456667777777777777777888765 4455543 88999888887777777778
Q ss_pred HHHHHH
Q 001304 1006 ALKYFR 1011 (1104)
Q Consensus 1006 i~k~~~ 1011 (1104)
+.|+++
T Consensus 911 ~~k~~~ 916 (917)
T TIGR01116 911 VLKFFS 916 (917)
T ss_pred HHHHHh
Confidence 888765
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-107 Score=1030.41 Aligned_cols=823 Identities=21% Similarity=0.279 Sum_probs=597.8
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccc-----cccCCcchh---hHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLI-----TPVNPASTW---GPLIFIFAVSAT 82 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~-----~~~~~~~~~---~~l~~i~~i~~~ 82 (1104)
+|+++||+|+++.++. ++| +.+++||+++++++++++++++++... .+.++...| +.++++++++.+
T Consensus 68 ~r~~~yG~N~l~~~~~~s~~----~~~~~~f~~~~~~~l~~~ails~~~~~~~~~~~~~~~~~~~~~~~~il~~v~~~~~ 143 (941)
T TIGR01517 68 RREKVYGKNELPEKPPKSFL----QIVWAALSDQTLILLSVAAVVSLVLGLPEPGEGKADTETGWIEGVAILVSVILVVL 143 (941)
T ss_pred HHHHHhCCCCCCCCCCCCHH----HHHHHHHhCHHHHHHHHHHHHHHHHhhcccccccCccccchHHHHHHHHHHHHHhH
Confidence 5888999999999876 455 789999999999999999999887542 112222222 122222333334
Q ss_pred HHHHHHHHHhh----hhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCC
Q 001304 83 KEAWDDYNRYL----SDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDG 158 (1104)
Q Consensus 83 ~~~~~d~~~~~----~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtG 158 (1104)
..++++++..+ .++..++.+++|+|||++++|+++||||||||.|++||.|||||+|++++ .+.||||+|||
T Consensus 144 i~~~~e~~~~~~~~~l~~~~~~~~~~ViRdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~li~g~----~l~VdES~LTG 219 (941)
T TIGR01517 144 VTAVNDYKKELQFRQLNREKSAQKIAVIRGGQEQQISIHDIVVGDIVSLSTGDVVPADGVFISGL----SLEIDESSITG 219 (941)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCceEEEECCEEEEEeHHHCCCCCEEEECCCCEecccEEEEEcC----cEEEEecccCC
Confidence 44555555444 33344577999999999999999999999999999999999999999654 49999999999
Q ss_pred CCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEE
Q 001304 159 ETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVA 238 (1104)
Q Consensus 159 Es~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvV 238 (1104)
||.|+.|.+ ...|++|+||.+.+| .+.++|
T Consensus 220 ES~pv~K~~-------------------------------------------------~~~n~v~~GT~v~~G-~~~~iV 249 (941)
T TIGR01517 220 ESDPIKKGA-------------------------------------------------PKDSFLLSGTVVNEG-SGRMLV 249 (941)
T ss_pred CCCcccccC-------------------------------------------------CCCceEEeCCeEEee-EEEEEE
Confidence 999999953 235799999999998 799999
Q ss_pred EEecCccccccccCC--CCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccc---cccccccccceeeccCCCcchhhhh
Q 001304 239 VYTGNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGN---VWKDTEARKQWYVLYPQEFPWYELL 313 (1104)
Q Consensus 239 v~tG~~T~~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1104)
++||.+|.+|++... ...+++++++.++++...+..+.++++++.++++. ++.....+. +.......++.+.+
T Consensus 250 ~~tG~~T~~gki~~~~~~~~~~t~l~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 327 (941)
T TIGR01517 250 TAVGVNSFGGKLMMELRAEGEDTPLQEKLSELAGLIGKFGMGSAVLLFLVLSLRYVFRIIRGDG--RDTEEDAQTFLDHF 327 (941)
T ss_pred EEeCCCcHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccc--cccchhhHHHHHHH
Confidence 999999999986442 12345799999999888776665555444433221 111000000 00000001223333
Q ss_pred hhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEE
Q 001304 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (1104)
Q Consensus 314 ~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 393 (1104)
..++.+++.++|++|++.+.++....+. +|.+++ +++|+++++|+||++++||||||||||+|+|++
T Consensus 328 ---~~al~llv~~iP~~Lp~~vti~l~~~~~------~mak~~----ilvk~l~a~E~lg~v~~Ic~DKTGTLT~n~m~v 394 (941)
T TIGR01517 328 ---IIAVTIVVVAVPEGLPLAVTIALAYSMK------KMMKDN----NLVRHLAACETMGSATAICSDKTGTLTQNVMSV 394 (941)
T ss_pred ---HHHHHHHHhhCCCchHHHHHHHHHHHHH------HHHhCC----CEEechHHhhhccCceEEEEcCcCceeeceEEE
Confidence 3334578889999987655555544443 565543 889999999999999999999999999999999
Q ss_pred EEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEE
Q 001304 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
++++.++..+..++. .. ..++...+++...+.||+..+...++....+..+||+|.|+++++++.|...
T Consensus 395 ~~~~~~~~~~~~~~~--------~~---~~~~~~~~~l~~~~~~~s~~~~~~~~~~~~~~~g~p~e~All~~~~~~~~~~ 463 (941)
T TIGR01517 395 VQGYIGEQRFNVRDV--------LR---NVPKHVRNILVEGISLNSSSEEVVDRGGKRAFIGSKTECALLGFLLLLGRDY 463 (941)
T ss_pred EEEEEecceEecCcc--------cc---cCCHHHHHHHHHHHHhCCCCccccCCCCccccCCCccHHHHHHHHHHcCCCH
Confidence 999887654432210 00 0112344556666666665543221111124579999999999998876432
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC-----C------chhH
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-----Q------QTRT 542 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~-----~------~~~~ 542 (1104)
. ..+..|++++.+||+|+||||+++++.+ ++++++++|||||.|+++|+.- . ..++
T Consensus 464 ~------------~~~~~~~~~~~~pF~s~~k~msvv~~~~-~~~~~~~~KGA~e~il~~c~~~~~~~g~~~~~~~~~~~ 530 (941)
T TIGR01517 464 Q------------EVRAEEKVVKIYPFNSERKFMSVVVKHS-GGKVREFRKGASEIVLKPCRKRLDSNGEATPISDDKDR 530 (941)
T ss_pred H------------HHHhhchhccccccCCCCCeEEEEEEeC-CCcEEEEEECChHHHHHhhhHHhhcCCCcccCcHHHHH
Confidence 0 1123467788999999999999999975 5679999999999999999631 1 1346
Q ss_pred HHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHH
Q 001304 543 FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETI 622 (1104)
Q Consensus 543 ~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I 622 (1104)
+.+.+++++++|+||+++|||.++.++++.| +..|+||+|+|+++++||+|++++++|
T Consensus 531 i~~~~~~~a~~G~Rvl~~A~~~~~~~~~~~~----------------------~~~e~~l~~lGli~~~Dplr~~~~~aI 588 (941)
T TIGR01517 531 CADVIEPLASDALRTICLAYRDFAPEEFPRK----------------------DYPNGGLTLIGVVGIKDPLRPGVREAV 588 (941)
T ss_pred HHHHHHHHHhcCCEEEEEEEEecCccccccc----------------------cccccCcEEEEEeeccCCCchhHHHHH
Confidence 7888999999999999999999876543221 234789999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhH
Q 001304 623 ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWAL 702 (1104)
Q Consensus 623 ~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 702 (1104)
+.|+++||+++|+|||++.||.++|++|||.+++.. +++|+.+
T Consensus 589 ~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~-------------------------------------vi~G~~~ 631 (941)
T TIGR01517 589 QECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGL-------------------------------------AMEGKEF 631 (941)
T ss_pred HHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCce-------------------------------------EeeHHHh
Confidence 999999999999999999999999999999765432 3444444
Q ss_pred HHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHH-hhhc
Q 001304 703 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQA-ARAA 781 (1104)
Q Consensus 703 ~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a-~~~A 781 (1104)
+...++ .+.+ ...+..+|||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |.+|+++ +++|
T Consensus 632 ~~l~~~---el~~--~i~~~~Vfar~sPe~K~~iV~~lq~~g~vVam~GDGvNDapALk~AdVGIAm-g~~gtdvAk~aA 705 (941)
T TIGR01517 632 RRLVYE---EMDP--ILPKLRVLARSSPLDKQLLVLMLKDMGEVVAVTGDGTNDAPALKLADVGFSM-GISGTEVAKEAS 705 (941)
T ss_pred hhCCHH---HHHH--HhccCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCCchHHHHHhCCcceec-CCCccHHHHHhC
Confidence 433221 1111 1345689999999999999999999999999999999999999999999999 6455554 4599
Q ss_pred ceecccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhh
Q 001304 782 DYSIGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVS 859 (1104)
Q Consensus 782 D~vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~ 859 (1104)
|++++++++ +..+ +.|||++|+|+++++.|.+++|+...++.++..++. +..+++++|++|+|++++++|++++
T Consensus 706 DivL~dd~f~~I~~~-i~~gR~~~~ni~k~i~~~l~~n~~~i~~~~~~~~~~---~~~pl~~~qil~inl~~d~~~al~l 781 (941)
T TIGR01517 706 DIILLDDNFASIVRA-VKWGRNVYDNIRKFLQFQLTVNVVAVILTFVGSCIS---STSPLTAVQLLWVNLIMDTLAALAL 781 (941)
T ss_pred CEEEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---ccccHHHHHHHHHHHHHHHhhHHHH
Confidence 999997665 4544 599999999999999999999998877777666554 3568999999999999999999988
Q ss_pred hccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheee---ccc---------ccceeeeehh
Q 001304 860 TIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA---YEK---------SEMEEVSMVA 927 (1104)
Q Consensus 860 ~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~~---------~~~~~~~~~~ 927 (1104)
++| ++++++|++||+ .+..++++..++..+++.+++++++.+++.+.... ... ...+|+.|.+
T Consensus 782 ~~e--~~~~~lm~~~P~---~~~~~li~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~ 856 (941)
T TIGR01517 782 ATE--PPTEALLDRKPI---GRNAPLISRSMWKNILGQAGYQLVVTFILLFAGGSIFDVSGPDEITSHQQGELNTIVFNT 856 (941)
T ss_pred ccC--CccHHHHhCCCC---CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccCcccccccccchhhHHHHHH
Confidence 887 588999999995 55667889999999999999998877766543221 111 1122333444
Q ss_pred hhHHHHHHHHhhhhccc--cc-hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHH
Q 001304 928 LSGCIWLQAFVVALETN--SF-TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGP 1003 (1104)
Q Consensus 928 ~~~~~~~~~~~~~~~~~--~~-~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp 1003 (1104)
++.+.+++.++++.... .| .++++..+|..+++.+++++++. ++. ..++++.+ ++..|+.++++.++.++.
T Consensus 857 ~v~~~~~~~~~~r~~~~~~~~~~~~~n~~~~~~~~~~~~l~~~~~--~~~---~~~f~~~~l~~~~w~~~~~~~~~~~~~ 931 (941)
T TIGR01517 857 FVLLQLFNEINARKLYERNVFEGLFKNRIFVTIMGFTFGFQVIIV--EFG---GSFFSTVSLSIEQWIGCVLLGMLSLIF 931 (941)
T ss_pred HHHHHHHHHHHHccCCcccccccccccHHHHHHHHHHHHHHHHHH--HHH---HHHhcccCCCHHHHHHHHHHHHHHHHH
Confidence 44555555666665432 23 23456666665555555554433 222 24555544 788898888777777777
Q ss_pred HHHHHHH
Q 001304 1004 IVALKYF 1010 (1104)
Q Consensus 1004 ~~i~k~~ 1010 (1104)
.++.|.+
T Consensus 932 ~~~~~~~ 938 (941)
T TIGR01517 932 GVLLRLI 938 (941)
T ss_pred HHHHHhc
Confidence 6777765
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-103 Score=993.67 Aligned_cols=817 Identities=20% Similarity=0.244 Sum_probs=619.9
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHH-HHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQF-SRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDY 89 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf-~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~ 89 (1104)
+|+++||+|+++.++. ++| +.+++|| +++++++++++++++++.+ .+..+ +.++++++++++.++++++
T Consensus 32 ~r~~~~G~N~i~~~~~~s~~----~~~l~~~~~~~~~~~L~~aa~ls~~~g----~~~~~-~~i~~~i~~~~~i~~~qe~ 102 (884)
T TIGR01522 32 HRRAFHGWNEFDVEEDESLW----KKFLSQFVKNPLILLLIASAVISVFMG----NIDDA-VSITLAILIVVTVGFVQEY 102 (884)
T ss_pred HHHHhcCCCcCCCCCCCCHH----HHHHHHHhhChHHHHHHHHHHHHHHHc----chhhH-HHHHhHHHHHHHHHHHHHH
Confidence 5889999999998765 555 8899999 9999988888888887643 22222 3334445566777899999
Q ss_pred HHhhhhH---hhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEee
Q 001304 90 NRYLSDK---KANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1104)
Q Consensus 90 ~~~~~~~---~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1104)
++.++.+ ++.+.+++|+|||++++|+++||||||||.|++||.|||||+|+++++ +.||||+|||||.|+.|.
T Consensus 103 ~a~~~l~~L~~l~~~~~~ViRdg~~~~I~~~eLv~GDiv~l~~Gd~IPaDg~ii~g~~----l~VDES~LTGES~pv~K~ 178 (884)
T TIGR01522 103 RSEKSLEALNKLVPPECHLIREGKLEHVLASTLVPGDLVCLSVGDRVPADLRIVEAVD----LSIDESNLTGETTPVSKV 178 (884)
T ss_pred HHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCccCCEEEecCCCEEeeeEEEEEcCc----eEEEcccccCCCcceecc
Confidence 8877654 456789999999999999999999999999999999999999997654 899999999999999996
Q ss_pred ccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccc
Q 001304 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1104)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1104)
+..... +......+.+|++|+||.+.+| .+.++|++||.+|.
T Consensus 179 ~~~~~~-------------------------------------~~~~~~~~~~n~v~~GT~v~~G-~~~~~V~~tG~~T~ 220 (884)
T TIGR01522 179 TAPIPA-------------------------------------ATNGDLAERSNIAFMGTLVRCG-HGKGIVVGTGSNTE 220 (884)
T ss_pred cccccc-------------------------------------cccccccccCceEEeCCEEEee-eEEEEEEEecCccH
Confidence 532100 0001122567999999999998 69999999999999
Q ss_pred cccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhh
Q 001304 247 LGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (1104)
Q Consensus 247 ~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1104)
+|++.+ .....++++++.+++++..+..+.+++++++++++++. ..++...+..++ .++
T Consensus 221 ~gki~~~v~~~~~~kt~lq~~l~~l~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~v---~ll 282 (884)
T TIGR01522 221 FGAVFKMMQAIEKPKTPLQKSMDLLGKQLSLVSFGVIGVICLVGWFQ---------------GKDWLEMFTISV---SLA 282 (884)
T ss_pred HHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cCCHHHHHHHHH---HHH
Confidence 998754 34556799999999999877666554444433332111 123455554443 367
Q ss_pred hccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEe
Q 001304 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY 403 (1104)
Q Consensus 324 ~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 403 (1104)
+.++|++||+.+.++...... +|.++ ++++|+++++|+||++++||||||||||+|+|++++++..+..+
T Consensus 283 v~aiP~~Lp~~vt~~l~~~~~------r~ak~----~ilvk~~~a~E~Lg~v~~Ic~DKTGTLT~n~m~v~~i~~~~~~~ 352 (884)
T TIGR01522 283 VAAIPEGLPIIVTVTLALGVL------RMSKK----RAIVRKLPSVETLGSVNVICSDKTGTLTKNHMTVTKIWTSDGLH 352 (884)
T ss_pred HHHccchHHHHHHHHHHHHHH------HHhhc----CCcccchHHHHhccCccEEEecCccccccCeEEEEEEEecCceE
Confidence 889999998776666665554 55544 48899999999999999999999999999999999998765432
Q ss_pred cCCCC-------cCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEee
Q 001304 404 GNETG-------DALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476 (1104)
Q Consensus 404 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~ 476 (1104)
...+. +...+.+... ...++...+++.+.++||++..... ++. ..+||+|.|+++++++.|+..
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~-~~~---~~g~p~e~All~~~~~~~~~~--- 423 (884)
T TIGR01522 353 TMLNAVSLNQFGEVIVDGDVLH--GFYTVAVSRILEAGNLCNNAKFRNE-ADT---LLGNPTDVALIELLMKFGLDD--- 423 (884)
T ss_pred eeccCCccCCCCcccccccccc--cccCHHHHHHHHHHhhhCCCeecCC-CCC---cCCChHHHHHHHHHHHcCcHh---
Confidence 11000 0000000000 0112345678888999998765432 121 247999999999998877531
Q ss_pred cCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc-----CC-------chhHHH
Q 001304 477 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA-----GQ-------QTRTFV 544 (1104)
Q Consensus 477 ~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~-----~~-------~~~~~~ 544 (1104)
....|+.++.+||+|+||||+++++...++++++|+|||||.|+++|.. +. ..+++.
T Consensus 424 -----------~~~~~~~~~~~pF~s~~k~m~v~~~~~~~~~~~~~~KGape~il~~c~~~~~~~g~~~~l~~~~~~~i~ 492 (884)
T TIGR01522 424 -----------LRETYIRVAEVPFSSERKWMAVKCVHRQDRSEMCFMKGAYEQVLKYCTYYQKKDGKTLTLTQQQRDVIQ 492 (884)
T ss_pred -----------HHhhCcEEeEeCCCCCCCeEEEEEEEcCCCeEEEEEeCChHHHHHhhhhhhhcCCCeeeCCHHHHHHHH
Confidence 1234678899999999999999998765678999999999999999963 11 124577
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHH
Q 001304 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (1104)
Q Consensus 545 ~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~ 624 (1104)
+++++++++|+|++++|||.+ +++|+|+|+++++||+|++++++|+.
T Consensus 493 ~~~~~~a~~G~rvl~~A~~~~---------------------------------~~~l~~lGli~l~Dp~r~~~~~~i~~ 539 (884)
T TIGR01522 493 EEAAEMASAGLRVIAFASGPE---------------------------------KGQLTFLGLVGINDPPRPGVKEAVTT 539 (884)
T ss_pred HHHHHHHhcCCEEEEEEEEcC---------------------------------CCCeEEEEEEeccCcchhHHHHHHHH
Confidence 888999999999999999865 25899999999999999999999999
Q ss_pred HHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHH
Q 001304 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (1104)
Q Consensus 625 l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 704 (1104)
|+++||+++|+|||+..||.++|+++|+...... +++|+.++.
T Consensus 540 l~~~Gi~v~miTGD~~~tA~~ia~~~Gi~~~~~~-------------------------------------~v~g~~l~~ 582 (884)
T TIGR01522 540 LITGGVRIIMITGDSQETAVSIARRLGMPSKTSQ-------------------------------------SVSGEKLDA 582 (884)
T ss_pred HHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCCc-------------------------------------eeEhHHhHh
Confidence 9999999999999999999999999999765432 123333332
Q ss_pred HHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcce
Q 001304 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADY 783 (1104)
Q Consensus 705 ~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~ 783 (1104)
..++ .+.+ ...+..+|||++|+||..+|+.+|+.|+.|+|+|||.||+||+++|||||+| |.+++++++ +||+
T Consensus 583 ~~~~---~l~~--~~~~~~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDGvND~pAl~~AdVGia~-g~~g~~va~~aaDi 656 (884)
T TIGR01522 583 MDDQ---QLSQ--IVPKVAVFARASPEHKMKIVKALQKRGDVVAMTGDGVNDAPALKLADIGVAM-GQTGTDVAKEAADM 656 (884)
T ss_pred CCHH---HHHH--HhhcCeEEEECCHHHHHHHHHHHHHCCCEEEEECCCcccHHHHHhCCeeEec-CCCcCHHHHHhcCE
Confidence 2111 1111 1345789999999999999999999999999999999999999999999999 766777765 8999
Q ss_pred ecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhcc
Q 001304 784 SIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTID 862 (1104)
Q Consensus 784 vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~ 862 (1104)
++.++++.... ++.+||.+|+|+++++.|.+..|+...++.+++.++ ....+++++|++|+|++++++|++++++|
T Consensus 657 vl~dd~~~~i~~~i~~gR~~~~ni~k~i~~~l~~ni~~~~~~~~~~~~---~~~~pl~~~qiL~inl~~d~~~a~~l~~e 733 (884)
T TIGR01522 657 ILTDDDFATILSAIEEGKGIFNNIKNFITFQLSTSVAALSLIALATLM---GFPNPLNAMQILWINILMDGPPAQSLGVE 733 (884)
T ss_pred EEcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH---cCCCchhHHHHHHHHHHHHhhHHHHhccC
Confidence 99987665444 369999999999999999999998755544433332 33467999999999999999999988887
Q ss_pred CCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeeccc--ccceeeeehhhhHHHHHHHHhhh
Q 001304 863 KDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEK--SEMEEVSMVALSGCIWLQAFVVA 940 (1104)
Q Consensus 863 ~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 940 (1104)
++++.+|++||+ .+.++++++.++..+++.|++++++.+++.+..+.... ....|+.|.+|+.+.+++.++++
T Consensus 734 --~~~~~~m~~~P~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~v~~q~~~~~~~r 808 (884)
T TIGR01522 734 --PVDKDVMRKPPR---PRNDKILTKDLIKKILVSAIIIVVGTLFVFVREMQDGVITARDTTMTFTCFVFFDMFNALACR 808 (884)
T ss_pred --CCChhHhhCCCC---CCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHc
Confidence 588899999984 67788999999998888898887765554333221111 11235566677777777788887
Q ss_pred hccccc---hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 941 LETNSF---TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 941 ~~~~~~---~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
....++ .++++..+|+.+++.+++++++.++|.++ .++.+.+ ++..|+.++++.++.++..++.|+++|.+
T Consensus 809 ~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~p~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~~~~k~~~~~~ 883 (884)
T TIGR01522 809 SQTKSVFEIGFFSNRMFNYAVGGSIIGQLLVIYFPPLQ---SVFQTEALSIKDLLFLLLITSSVCIVDEIRKKVERSR 883 (884)
T ss_pred cCCccccccCcccCHHHHHHHHHHHHHHHHHHHHHHHH---HHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 754442 23567778887777777777778887655 4455544 88899988888888888888899887653
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-99 Score=971.18 Aligned_cols=770 Identities=19% Similarity=0.253 Sum_probs=563.5
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~ 91 (1104)
+|+++||+|++..++.++| +.+++||.+|+++++++.+++.++- +.+...+.++++++++.+...+++++.
T Consensus 147 ~r~~~yG~N~i~~~~~s~~----~ll~~~~~~p~~i~~i~~~~l~~~~-----~~~~~~~~i~~i~~~~~~~~~~~~~k~ 217 (1054)
T TIGR01657 147 QRKAKYGKNEIEIPVPSFL----ELLKEEVLHPFYVFQVFSVILWLLD-----EYYYYSLCIVFMSSTSISLSVYQIRKQ 217 (1054)
T ss_pred HHHHhcCCCeeecCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhh-----hhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999999877766 8899999999986666654444321 122222334445556777788888887
Q ss_pred hhhhHhhc--ceEEEEEECCeEEEEeccCCccceEEEEe--cCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeec
Q 001304 92 YLSDKKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLR--ENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLI 167 (1104)
Q Consensus 92 ~~~~~~~n--~~~~~V~r~g~~~~i~~~~lvvGDIV~l~--~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~ 167 (1104)
.++.+++. +..++|+|||++++|+++||||||||.|+ +||.|||||+|+ +|.|.||||+|||||.|+.|.+
T Consensus 218 ~~~L~~~~~~~~~v~V~Rdg~~~~I~s~eLvpGDiv~l~~~~g~~iPaD~~ll-----~g~~~VdES~LTGES~Pv~K~~ 292 (1054)
T TIGR01657 218 MQRLRDMVHKPQSVIVIRNGKWVTIASDELVPGDIVSIPRPEEKTMPCDSVLL-----SGSCIVNESMLTGESVPVLKFP 292 (1054)
T ss_pred HHHHHHhhcCCeeEEEEECCEEEEEEcccCCCCCEEEEecCCCCEecceEEEE-----eCcEEEecccccCCccceeccc
Confidence 77766653 56899999999999999999999999999 999999999999 5669999999999999999975
Q ss_pred cccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceecc------CceEEEEEEEe
Q 001304 168 PAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN------TEWACGVAVYT 241 (1104)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~------~~~~~gvVv~t 241 (1104)
..... ..+.++ ...+...+|++|+||.+.. .+.+.|+|++|
T Consensus 293 ~~~~~-----------------~~~~~~----------------~~~~~~~~~~lf~GT~v~~~~~~~g~g~~~~vV~~T 339 (1054)
T TIGR01657 293 IPDNG-----------------DDDEDL----------------FLYETSKKHVLFGGTKILQIRPYPGDTGCLAIVVRT 339 (1054)
T ss_pred CCccc-----------------cccccc----------------cccccccceEEEcCCEEEEEecCCCCCcEEEEEEeC
Confidence 32100 000000 0012256899999999974 23699999999
Q ss_pred cCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHH
Q 001304 242 GNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLR 318 (1104)
Q Consensus 242 G~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (1104)
|.+|..|++.+ .++++.+++++...+++.+++.++++.+++..+.+ .. .+.++...+ +.
T Consensus 340 G~~T~~G~i~~~i~~~~~~~~~~~~~~~~~~~~l~~~a~i~~i~~~~~~-~~--------------~~~~~~~~~---l~ 401 (1054)
T TIGR01657 340 GFSTSKGQLVRSILYPKPRVFKFYKDSFKFILFLAVLALIGFIYTIIEL-IK--------------DGRPLGKII---LR 401 (1054)
T ss_pred CccccchHHHHHhhCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--------------cCCcHHHHH---HH
Confidence 99999998765 34556788999988887766555443332222111 10 112334444 44
Q ss_pred HHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEE
Q 001304 319 FELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCI 398 (1104)
Q Consensus 319 ~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~ 398 (1104)
++.+++.++|++||+.++++...... +|.+. ++.||++..+|+||+++++|||||||||+|+|+|.+++.
T Consensus 402 ~l~iiv~~vP~~LP~~~ti~l~~~~~------rL~k~----~il~~~~~~ie~lG~v~vicfDKTGTLTen~m~v~~v~~ 471 (1054)
T TIGR01657 402 SLDIITIVVPPALPAELSIGINNSLA------RLKKK----GIFCTSPFRINFAGKIDVCCFDKTGTLTEDGLDLRGVQG 471 (1054)
T ss_pred HHHHHHhhcCchHHHHHHHHHHHHHH------HHHHC----CEEEcCcccceecceeeEEEEcCCCCCccCCeeEEeEec
Confidence 55688899999999888887777655 55544 489999999999999999999999999999999999876
Q ss_pred ecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEe-ec
Q 001304 399 GGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVN-KN 477 (1104)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~-~~ 477 (1104)
.+...... .... + ........+..++++||++.... + ...|||.|.|+++++ |+.+.. ..
T Consensus 472 ~~~~~~~~--~~~~-----~---~~~~~~~~~~~~~a~C~~~~~~~---~---~~~Gdp~E~al~~~~---~~~~~~~~~ 532 (1054)
T TIGR01657 472 LSGNQEFL--KIVT-----E---DSSLKPSITHKALATCHSLTKLE---G---KLVGDPLDKKMFEAT---GWTLEEDDE 532 (1054)
T ss_pred ccCccccc--cccc-----c---ccccCchHHHHHHHhCCeeEEEC---C---EEecCHHHHHHHHhC---CCEEECCCC
Confidence 44211000 0000 0 00122335677899999986542 2 236999999999976 333322 11
Q ss_pred C---cE--EEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHHHHHHHHh
Q 001304 478 A---SI--LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQ 552 (1104)
Q Consensus 478 ~---~~--~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~ 552 (1104)
. .. ..+...+....+++++.+||+|++|||||+++.++++++++|+|||||.|+++|+++..++++.+.+++|++
T Consensus 533 ~~~~~~~~~~i~~~~~~~~~~il~~~pF~S~~krMsvvv~~~~~~~~~~~~KGApE~Il~~c~~~~~p~~~~~~~~~~a~ 612 (1054)
T TIGR01657 533 SAEPTSILAVVRTDDPPQELSIIRRFQFSSALQRMSVIVSTNDERSPDAFVKGAPETIQSLCSPETVPSDYQEVLKSYTR 612 (1054)
T ss_pred cccccccccceeccCCCceEEEEEEEeecCCCCEEEEEEEEcCCCeEEEEEECCHHHHHHHcCCcCCChhHHHHHHHHHh
Confidence 0 00 001111223679999999999999999999998766778999999999999999977778899999999999
Q ss_pred ccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeE
Q 001304 553 LGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINF 632 (1104)
Q Consensus 553 ~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v 632 (1104)
+|+|||++|||++++.++.++.+ .+ ++++|+||+|+|+++++||+|++++++|+.|++|||++
T Consensus 613 ~G~RVLalA~k~l~~~~~~~~~~---------~~--------r~~~E~~L~flGli~~~d~lr~~~~~~I~~l~~agi~v 675 (1054)
T TIGR01657 613 EGYRVLALAYKELPKLTLQKAQD---------LS--------RDAVESNLTFLGFIVFENPLKPDTKEVIKELKRASIRT 675 (1054)
T ss_pred cCCEEEEEEEeecCccchhhhhh---------cc--------HHHHhcCceEEEEEEEecCCCccHHHHHHHHHHCCCeE
Confidence 99999999999997543322211 01 25689999999999999999999999999999999999
Q ss_pred EEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHH-----HH-HHHHH-------HHHHHc-----cccCCCCCceE
Q 001304 633 WMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTED-----EV-CRSLE-------RVLLTM-----RITTSEPKDVA 694 (1104)
Q Consensus 633 ~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~-----~~-~~~~~-------~~~~~~-----~~~~~~~~~~~ 694 (1104)
+|+|||++.||.++|++|||++++.. ++..+....+ .+ ....+ ...... ........++.
T Consensus 676 ~miTGD~~~TA~~iA~~~gii~~~~~--vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1054)
T TIGR01657 676 VMITGDNPLTAVHVARECGIVNPSNT--LILAEAEPPESGKPNQIKFEVIDSIPFASTQVEIPYPLGQDSVEDLLASRYH 753 (1054)
T ss_pred EEECCCCHHHHHHHHHHcCCCCCCce--EEEeecccccCCCCceEEEEecCccccccccccccCcccccchhhhcccceE
Confidence 99999999999999999999876532 2222110000 00 00000 000000 00011234567
Q ss_pred EEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCch
Q 001304 695 FVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREG 774 (1104)
Q Consensus 695 lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~ 774 (1104)
++++|+.++.+.+...+.+.++ ..+..||||++|+||.++|+.+|+.|++|+|+|||+||+||||+|||||||++.
T Consensus 754 ~~itG~~l~~l~~~~~~~l~~~--~~~~~VfAR~sP~qK~~iV~~lq~~g~~V~m~GDG~ND~~ALK~AdVGIam~~~-- 829 (1054)
T TIGR01657 754 LAMSGKAFAVLQAHSPELLLRL--LSHTTVFARMAPDQKETLVELLQKLDYTVGMCGDGANDCGALKQADVGISLSEA-- 829 (1054)
T ss_pred EEEEcHHHHHHHHhhHHHHHHH--HhcCeEEEecCHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHHhcCcceeeccc--
Confidence 9999999988765544455544 345679999999999999999999999999999999999999999999999433
Q ss_pred HHHhhhcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhh
Q 001304 775 LQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTS 853 (1104)
Q Consensus 775 ~~a~~~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~ 853 (1104)
+|+.+||+++.++++-... ++.+||.++.++.++++|.+..+++..+..++ ..+.| .+++++|++|+|+++++
T Consensus 830 -das~AA~f~l~~~~~~~I~~~I~eGR~~l~~~~~~~~~~~~~~~~~~~~~~~----l~~~~-~~l~~~Q~l~i~li~~~ 903 (1054)
T TIGR01657 830 -EASVAAPFTSKLASISCVPNVIREGRCALVTSFQMFKYMALYSLIQFYSVSI----LYLIG-SNLGDGQFLTIDLLLIF 903 (1054)
T ss_pred -cceeecccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHcc-CcCccHHHHHHHHHHHH
Confidence 3678999999977664443 46899999999988887776665544332221 11223 56789999999999999
Q ss_pred hhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhhe
Q 001304 854 IPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHV 912 (1104)
Q Consensus 854 lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 912 (1104)
+|++++.++ +|++.+|++|| ...++++.++...++++++++++.++..+..
T Consensus 904 ~~~l~l~~~--~p~~~l~~~~P------~~~l~~~~~~~si~~q~~i~~~~~~~~~~~~ 954 (1054)
T TIGR01657 904 PVALLMSRN--KPLKKLSKERP------PSNLFSVYILTSVLIQFVLHILSQVYLVFEL 954 (1054)
T ss_pred HHHHHHHcC--CchhhcCCCCC------CccccCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999988887 58889999988 2588999998888888888888776665443
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-100 Score=952.43 Aligned_cols=804 Identities=20% Similarity=0.219 Sum_probs=566.5
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccc------cCCcchhhHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP------VNPASTWGPLIFIFAVSATKE 84 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~------~~~~~~~~~l~~i~~i~~~~~ 84 (1104)
+|+++||+|+++.++. ++| +.+++||++++++.++++++++++..... ...+...+.++++++++++.+
T Consensus 53 ~rl~~~G~N~l~~~~~~~~~----~~~l~~f~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~iI~~~v~l~~~i~ 128 (903)
T PRK15122 53 ERLQRYGPNEVAHEKPPHAL----VQLLQAFNNPFIYVLMVLAAISFFTDYWLPLRRGEETDLTGVIIILTMVLLSGLLR 128 (903)
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHHhhccCCccccHhHHHHHHHHHHHHHHHH
Confidence 5889999999998775 455 88999999999988888888888753211 011223344556667888899
Q ss_pred HHHHHHHhhh---hHhhcceEEEEEECC------eEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEecc
Q 001304 85 AWDDYNRYLS---DKKANEKEVWVVKQG------IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAA 155 (1104)
Q Consensus 85 ~~~d~~~~~~---~~~~n~~~~~V~r~g------~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~ 155 (1104)
+++++++.++ .+++.+.+++|+||| ++++|+++||+|||+|.|++||+|||||+|+++++ +.||||+
T Consensus 129 ~~qe~~a~~a~~~L~~l~~~~~~V~Rdg~~~~~g~~~~I~~~eLv~GDiV~l~~Gd~IPaDg~li~g~~----l~VDES~ 204 (903)
T PRK15122 129 FWQEFRSNKAAEALKAMVRTTATVLRRGHAGAEPVRREIPMRELVPGDIVHLSAGDMIPADVRLIESRD----LFISQAV 204 (903)
T ss_pred HHHHHHHHHHHHHHHhccCCceEEEECCccCCCCeEEEEEHHHCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEccc
Confidence 9999998764 456677899999994 79999999999999999999999999999997655 8999999
Q ss_pred CCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEE
Q 001304 156 LDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWAC 235 (1104)
Q Consensus 156 LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~ 235 (1104)
|||||.|+.|.+.... +. .+.. +...+++....+.+|++|+||.+.+| .+.
T Consensus 205 LTGES~PV~K~~~~~~--------------~~--~~~~------------~~~~~~~~~~~~~~n~vfaGT~V~~G-~~~ 255 (903)
T PRK15122 205 LTGEALPVEKYDTLGA--------------VA--GKSA------------DALADDEGSLLDLPNICFMGTNVVSG-TAT 255 (903)
T ss_pred cCCCCcceeeeccccc--------------cc--cccc------------cccccccCCcccccceEEeCCEEEee-eEE
Confidence 9999999999641100 00 0000 00001111223678999999999998 699
Q ss_pred EEEEEecCccccccccCCC--CCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhh
Q 001304 236 GVAVYTGNETKLGMTRGIP--EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELL 313 (1104)
Q Consensus 236 gvVv~tG~~T~~~~~~~~~--~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (1104)
++|++||.+|.+|++.+.. +...+++++.++++...+..+.++++.+..+++.+. ..+|.+.+
T Consensus 256 ~~V~atG~~T~~gkI~~~v~~~~~~t~l~~~l~~i~~~l~~~~~~~~~~v~~~~~~~---------------~~~~~~~l 320 (903)
T PRK15122 256 AVVVATGSRTYFGSLAKSIVGTRAQTAFDRGVNSVSWLLIRFMLVMVPVVLLINGFT---------------KGDWLEAL 320 (903)
T ss_pred EEEEEeccccHhhHHHHHhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhhc---------------cCCHHHHH
Confidence 9999999999999876522 445689999999988877666555544443332111 11344555
Q ss_pred hhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEE
Q 001304 314 VIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393 (1104)
Q Consensus 314 ~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v 393 (1104)
..++ .+++.++|++||+.+.++....+. +|.++ ++++|+++++|+||++++||||||||||+|+|++
T Consensus 321 ~~ai---sl~V~~~Pe~Lp~~vt~~La~g~~------~mak~----~ilVk~l~avE~Lg~v~vIc~DKTGTLT~~~m~V 387 (903)
T PRK15122 321 LFAL---AVAVGLTPEMLPMIVSSNLAKGAI------AMARR----KVVVKRLNAIQNFGAMDVLCTDKTGTLTQDRIIL 387 (903)
T ss_pred HHHH---HHHHHHccchHHHHHHHHHHHHHH------HHHHc----CCeecccchhhhhcCCcEEEecCCcccccCeEEE
Confidence 4443 367889999998666555554443 45544 4899999999999999999999999999999999
Q ss_pred EEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEE
Q 001304 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
.+++..+. . . + .+++...++| +.. +. ..+||.|.|+++++.+.+...
T Consensus 388 ~~~~~~~~-------~--~-----------~---~~~l~~a~l~-s~~----~~-----~~~~p~e~All~~a~~~~~~~ 434 (903)
T PRK15122 388 EHHLDVSG-------R--K-----------D---ERVLQLAWLN-SFH----QS-----GMKNLMDQAVVAFAEGNPEIV 434 (903)
T ss_pred EEEEcCCC-------C--C-----------h---HHHHHHHHHh-CCC----CC-----CCCChHHHHHHHHHHHcCchh
Confidence 98652110 0 0 0 1223333333 111 11 157999999999998766421
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC----C-------chhH
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG----Q-------QTRT 542 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~----~-------~~~~ 542 (1104)
....|+.++.+||+|.||+|+++++.. +|++++++|||||.|+++|..- . ..++
T Consensus 435 --------------~~~~~~~~~~~pF~s~~k~ms~v~~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~ 499 (903)
T PRK15122 435 --------------KPAGYRKVDELPFDFVRRRLSVVVEDA-QGQHLLICKGAVEEMLAVATHVRDGDTVRPLDEARRER 499 (903)
T ss_pred --------------hhhcCceEEEeeeCCCcCEEEEEEEcC-CCcEEEEECCcHHHHHHhchhhhcCCCeecCCHHHHHH
Confidence 123467788999999999999999875 5788999999999999999631 1 1245
Q ss_pred HHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHH
Q 001304 543 FVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETI 622 (1104)
Q Consensus 543 ~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I 622 (1104)
+.+.+++++.+|+|++++|||.++.++..++ ..+..|+|++|+|+++++||+|++++++|
T Consensus 500 i~~~~~~~a~~G~rvlavA~k~~~~~~~~~~--------------------~~~~~e~~l~~lGli~l~Dp~R~~a~~aI 559 (903)
T PRK15122 500 LLALAEAYNADGFRVLLVATREIPGGESRAQ--------------------YSTADERDLVIRGFLTFLDPPKESAAPAI 559 (903)
T ss_pred HHHHHHHHHhCCCEEEEEEEeccCccccccc--------------------cccccccCcEEEEEEeccCccHHHHHHHH
Confidence 6778899999999999999999865432110 01235789999999999999999999999
Q ss_pred HHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhH
Q 001304 623 ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWAL 702 (1104)
Q Consensus 623 ~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l 702 (1104)
++|+++||+++|+|||++.||.++|+++||... . +++|..+
T Consensus 560 ~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~--~-------------------------------------vi~G~el 600 (903)
T PRK15122 560 AALRENGVAVKVLTGDNPIVTAKICREVGLEPG--E-------------------------------------PLLGTEI 600 (903)
T ss_pred HHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCC--C-------------------------------------ccchHhh
Confidence 999999999999999999999999999999421 1 1233333
Q ss_pred HHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-hhc
Q 001304 703 EIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAA 781 (1104)
Q Consensus 703 ~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~A 781 (1104)
+.+.++ .+.+ ...+..+|||++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| | .|++++ ++|
T Consensus 601 ~~~~~~---el~~--~v~~~~VfAr~sPe~K~~iV~~Lq~~G~vVamtGDGvNDaPALk~ADVGIAm-g-~gtdvAkeaA 673 (903)
T PRK15122 601 EAMDDA---ALAR--EVEERTVFAKLTPLQKSRVLKALQANGHTVGFLGDGINDAPALRDADVGISV-D-SGADIAKESA 673 (903)
T ss_pred hhCCHH---HHHH--HhhhCCEEEEeCHHHHHHHHHHHHhCCCEEEEECCCchhHHHHHhCCEEEEe-C-cccHHHHHhc
Confidence 322111 1111 1245679999999999999999999999999999999999999999999999 6 455554 599
Q ss_pred ceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhh
Q 001304 782 DYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVST 860 (1104)
Q Consensus 782 D~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~ 860 (1104)
|+||+++++-... .+.+||.+|+|+++++.|.+..|+...+..++..++ .+..++.+.|++|.|+++|. |+++++
T Consensus 674 DiVLldd~f~~Iv~ai~~gR~i~~nI~k~i~~~ls~n~~~~~~~~~~~~~---~~~~pl~~~qil~~nli~D~-~~lal~ 749 (903)
T PRK15122 674 DIILLEKSLMVLEEGVIKGRETFGNIIKYLNMTASSNFGNVFSVLVASAF---IPFLPMLAIHLLLQNLMYDI-SQLSLP 749 (903)
T ss_pred CEEEecCChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---hccchhHHHHHHHHHHHHHH-HHHhhc
Confidence 9999988876555 468999999999999999988887655444433332 23357899999999999995 888888
Q ss_pred ccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeeccccc----ceeeeehhhhHHHHHHH
Q 001304 861 IDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKSE----MEEVSMVALSGCIWLQA 936 (1104)
Q Consensus 861 ~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 936 (1104)
+| ++++++| +||+ .++.++++..+++.-. .+.+.++..|++.++.+...... .++..|..+..+.+++.
T Consensus 750 ~d--~~~~~~m-~~P~---~~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~l~~~q~~~~ 822 (903)
T PRK15122 750 WD--KMDKEFL-RKPR---KWDAKNIGRFMLWIGP-TSSIFDITTFALMWFVFAANSVEMQALFQSGWFIEGLLSQTLVV 822 (903)
T ss_pred CC--CCCHhhc-CCCC---CCChhhhHHHHHHHHH-HHHHHHHHHHHHHHHHhccCcHhhhhhhHHHHHHHHHHHHHHHH
Confidence 88 5888889 6662 4555566554432111 22223333333322222111101 11222333444444455
Q ss_pred HhhhhccccchHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHH
Q 001304 937 FVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALK 1008 (1104)
Q Consensus 937 ~~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k 1008 (1104)
|++|..... ++.+...+..+++.++++++..++|+.. +..++++.. ++.+|++++.+.++.++...+.|
T Consensus 823 ~~~R~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~f~~~~l~~~~~~~~~~~~~~~~~~~e~~k 892 (903)
T PRK15122 823 HMLRTQKIP--FIQSTAALPVLLTTGLIMAIGIYIPFSP-LGAMVGLEPLPWSYFPWLAATLLGYCLVAQGMK 892 (903)
T ss_pred HhhCcCCCC--cCcchHHHHHHHHHHHHHHHHHHhhHHH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 556654322 2223334444445555566666777511 124455544 77888887777766666666666
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-99 Score=949.00 Aligned_cols=772 Identities=19% Similarity=0.238 Sum_probs=555.5
Q ss_pred ccccCCCCceeecCCCc-cchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYT-LMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~-~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~ 90 (1104)
+|+++||+|+++.++.+ +| +.|++||+++++++++++++++++.. .+...+.++++++++.+.++++++|
T Consensus 75 ~r~~~~G~N~l~~~~~~s~~----~~~~~~~~~p~~~lL~~aa~ls~~~~-----~~~~a~~I~~iv~i~~~i~~~qe~r 145 (902)
T PRK10517 75 SAREQHGENELPAQKPLPWW----VHLWVCYRNPFNILLTILGAISYATE-----DLFAAGVIALMVAISTLLNFIQEAR 145 (902)
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHc-----cHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 58899999999998875 55 88999999999988888888887643 2333345556777888999999999
Q ss_pred Hhhh---hHhhcceEEEEEEC------CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCC
Q 001304 91 RYLS---DKKANEKEVWVVKQ------GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETD 161 (1104)
Q Consensus 91 ~~~~---~~~~n~~~~~V~r~------g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~ 161 (1104)
+.++ .+++.+.+++|+|| |++++|+++||||||||.|++||.|||||+|+++++ +.||||+|||||.
T Consensus 146 a~~~~~~L~~l~~~~a~ViR~g~~~~~g~~~~I~~~eLvpGDiV~l~~Gd~IPaDg~li~g~~----l~VDES~LTGES~ 221 (902)
T PRK10517 146 STKAADALKAMVSNTATVLRVINDKGENGWLEIPIDQLVPGDIIKLAAGDMIPADLRILQARD----LFVAQASLTGESL 221 (902)
T ss_pred HHHHHHHHHhhCCCeEEEEECCccCCCCeEEEEEHHhCCCCCEEEECCCCEEeeeEEEEEcCc----eEEEecCcCCCCC
Confidence 8764 56667889999999 789999999999999999999999999999997655 8999999999999
Q ss_pred ceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEe
Q 001304 162 LKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241 (1104)
Q Consensus 162 ~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~t 241 (1104)
|+.|.+... .+.+..+.+.+|++|+||.+.+| .+.++|++|
T Consensus 222 PV~K~~~~~--------------------------------------~~~~~~~~~~~n~vfaGT~V~~G-~~~~vV~at 262 (902)
T PRK10517 222 PVEKFATTR--------------------------------------QPEHSNPLECDTLCFMGTNVVSG-TAQAVVIAT 262 (902)
T ss_pred ceecccccc--------------------------------------cccccCccccccceeeCceEeee-eEEEEEEEe
Confidence 999965311 01112234678999999999998 699999999
Q ss_pred cCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHH
Q 001304 242 GNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLR 318 (1104)
Q Consensus 242 G~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (1104)
|.+|.+|++.. ..+.+++++++.+++++..+..++++++.++.+++.+. ..+|...+..+++
T Consensus 263 G~~T~~GkI~~~v~~~~~~~t~lq~~~~~i~~~l~~~~~~~~~~v~~i~~~~---------------~~~~~~~l~~als 327 (902)
T PRK10517 263 GANTWFGQLAGRVSEQDSEPNAFQQGISRVSWLLIRFMLVMAPVVLLINGYT---------------KGDWWEAALFALS 327 (902)
T ss_pred ccccHHHHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHh---------------cCCHHHHHHHHHH
Confidence 99999998764 34567899999999998887776666655544432111 1134455544443
Q ss_pred HHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEE
Q 001304 319 FELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCI 398 (1104)
Q Consensus 319 ~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~ 398 (1104)
+++.++|++||+.+.++....+. +|.++ ++++|+++.+|+||++|+||||||||||+|+|++.++..
T Consensus 328 ---v~V~~~Pe~LP~~vt~~la~g~~------~mak~----~ilVk~l~aiE~lg~v~vic~DKTGTLT~n~m~V~~~~~ 394 (902)
T PRK10517 328 ---VAVGLTPEMLPMIVTSTLARGAV------KLSKQ----KVIVKRLDAIQNFGAMDILCTDKTGTLTQDKIVLENHTD 394 (902)
T ss_pred ---HHHHHcccHHHHHHHHHHHHHHH------HHHhC----CcEEecchhhhhccCCCEEEecCCCccccceEEEEEEec
Confidence 67789999998766555555444 45544 389999999999999999999999999999999987531
Q ss_pred ecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecC
Q 001304 399 GGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNA 478 (1104)
Q Consensus 399 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~ 478 (1104)
. .+. ...+++...++|.... . ..+||.|.|+++++...+.
T Consensus 395 ~---~~~--------------------~~~~ll~~a~l~~~~~-----~-----~~~~p~d~All~~a~~~~~------- 434 (902)
T PRK10517 395 I---SGK--------------------TSERVLHSAWLNSHYQ-----T-----GLKNLLDTAVLEGVDEESA------- 434 (902)
T ss_pred C---CCC--------------------CHHHHHHHHHhcCCcC-----C-----CCCCHHHHHHHHHHHhcch-------
Confidence 0 000 0123344444443211 1 1479999999999865321
Q ss_pred cEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc----CC-------chhHHHHHH
Q 001304 479 SILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA----GQ-------QTRTFVEAV 547 (1104)
Q Consensus 479 ~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~----~~-------~~~~~~~~~ 547 (1104)
......|+.++.+||||+||||+++++.. ++.+.+++|||||.|+++|.. +. ..+++.+..
T Consensus 435 -------~~~~~~~~~~~~~pFds~~k~msvvv~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~ 506 (902)
T PRK10517 435 -------RSLASRWQKIDEIPFDFERRRMSVVVAEN-TEHHQLICKGALEEILNVCSQVRHNGEIVPLDDIMLRRIKRVT 506 (902)
T ss_pred -------hhhhhcCceEEEeeeCCCcceEEEEEEEC-CCeEEEEEeCchHHHHHhchhhhcCCCeecCCHHHHHHHHHHH
Confidence 01123567788999999999999999865 566789999999999999963 11 124567778
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
++++++|+||+++|||+++.++. .+ ....|+|++|+|+++++||+|++++++|++|++
T Consensus 507 ~~~a~~G~rvlavA~k~~~~~~~-~~---------------------~~~~e~~l~~lGli~~~Dp~R~~a~~aI~~l~~ 564 (902)
T PRK10517 507 DTLNRQGLRVVAVATKYLPAREG-DY---------------------QRADESDLILEGYIAFLDPPKETTAPALKALKA 564 (902)
T ss_pred HHHHhcCCEEEEEEEecCCcccc-cc---------------------ccccccCceeeehHhhhCcchhhHHHHHHHHHH
Confidence 89999999999999998865321 00 011368999999999999999999999999999
Q ss_pred cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHH
Q 001304 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (1104)
Q Consensus 628 aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~ 707 (1104)
+||+|+|+|||++.||.++|+++||... . +++|..++...+
T Consensus 565 aGI~v~miTGD~~~tA~~IA~~lGI~~~--~-------------------------------------v~~G~el~~l~~ 605 (902)
T PRK10517 565 SGVTVKILTGDSELVAAKVCHEVGLDAG--E-------------------------------------VLIGSDIETLSD 605 (902)
T ss_pred CCCEEEEEcCCCHHHHHHHHHHcCCCcc--C-------------------------------------ceeHHHHHhCCH
Confidence 9999999999999999999999999421 1 223333332211
Q ss_pred HHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHH-Hhhhcceecc
Q 001304 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ-AARAADYSIG 786 (1104)
Q Consensus 708 ~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~-a~~~AD~vl~ 786 (1104)
+ .+.+ ...+..+|+|++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| | +|++ |+++||++|+
T Consensus 606 ~---el~~--~~~~~~VfAr~sPe~K~~IV~~Lq~~G~vVam~GDGvNDaPALk~ADVGIAm-g-~gtdvAkeaADiVLl 678 (902)
T PRK10517 606 D---ELAN--LAERTTLFARLTPMHKERIVTLLKREGHVVGFMGDGINDAPALRAADIGISV-D-GAVDIAREAADIILL 678 (902)
T ss_pred H---HHHH--HHhhCcEEEEcCHHHHHHHHHHHHHCCCEEEEECCCcchHHHHHhCCEEEEe-C-CcCHHHHHhCCEEEe
Confidence 1 1111 1234679999999999999999999999999999999999999999999999 6 4555 5559999999
Q ss_pred cchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCC
Q 001304 787 KFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDL 865 (1104)
Q Consensus 787 ~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~ 865 (1104)
++++.... .+.+||.+|+|+++++.|.+..|+...+..++..++. +..|+.+.|++|.|+++| +|.+++++| +
T Consensus 679 dd~~~~I~~ai~~gR~i~~nI~k~i~~~ls~n~~~v~~~~~~~~~~---~~~pl~~~qiL~inl~~D-~~~~al~~d--~ 752 (902)
T PRK10517 679 EKSLMVLEEGVIEGRRTFANMLKYIKMTASSNFGNVFSVLVASAFL---PFLPMLPLHLLIQNLLYD-VSQVAIPFD--N 752 (902)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh---hhhhhHHHHHHHHHHHHH-HhHHhhcCC--C
Confidence 98876554 4689999999999999999988886655554444332 225789999999999999 788888888 5
Q ss_pred CchhhccCCccccccccCcccCchhhHH-HHHHHHHHHH---HHHHHhhheeeccccccee-eeehhhhHHHHHH---HH
Q 001304 866 SEGTVMQHPQILFYCQAGRLLNPSTFAG-WFGRSLFHAI---VAFVISIHVYAYEKSEMEE-VSMVALSGCIWLQ---AF 937 (1104)
Q Consensus 866 ~~~~~~~~p~~y~~~~~~~~~~~~~~~~-~~~~~~~~~~---v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~---~~ 937 (1104)
+++.+|++||+|.. ..+.. .+..+++.++ ..|++.++.+........+ +.+..|...++.+ .+
T Consensus 753 ~~~~~m~~p~r~~~---------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~~~~q~~~~~ 823 (902)
T PRK10517 753 VDDEQIQKPQRWNP---------ADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPETQTLFQSGWFVVGLLSQTLIVH 823 (902)
T ss_pred CChhhhcCCCCCCH---------HHHHHHHHHHHHHHHHHHHHHHHHHHHHccccchhhHhHHHHHHHHHHHHHHHHHHH
Confidence 88889999996432 22222 2223444332 2222222222211110001 1112254555544 44
Q ss_pred hhhhccccchHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-C--HHHHHHHHHHH
Q 001304 938 VVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-Q--PSYWITMFLIV 997 (1104)
Q Consensus 938 ~~~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~--~~~w~~ill~~ 997 (1104)
++|.... .++.+...|..+++.++++++..++|.... ..++++.. + ...|+.++++.
T Consensus 824 ~~R~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~l~~~~~~~~~~~~~~ 883 (902)
T PRK10517 824 MIRTRRI--PFIQSRAAWPLMIMTLIVMAVGIALPFSPL-ASYLQLQALPLSYFPWLVAILAG 883 (902)
T ss_pred hhccCCC--CcccchHHHHHHHHHHHHHHHHHHhhHHHH-HHhhCCcCCChhHHHHHHHHHHH
Confidence 5554332 233445566666666666666667773221 13444433 3 34555444433
|
|
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-97 Score=932.69 Aligned_cols=751 Identities=18% Similarity=0.208 Sum_probs=544.7
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYN 90 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~ 90 (1104)
+|+++||+|+++.++. ++| +.+++||+++++++++++++++++.. .+...+.++++++++++.++++++|
T Consensus 41 ~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~p~~~iL~~~a~ls~~~~-----~~~~~~iI~~iv~~~~~i~~~~e~~ 111 (867)
T TIGR01524 41 ERLAEFGPNQTVEEKKVPNL----RLLIRAFNNPFIYILAMLMGVSYLTD-----DLEATVIIALMVLASGLLGFIQESR 111 (867)
T ss_pred HHHHhcCCCcCCCCCCCCHH----HHHHHHHhhHHHHHHHHHHHHHHHHh-----hHHHHHHhhhHHHHHHHHHHHHHHH
Confidence 5889999999999876 455 88999999999988888888887642 2333344556667788889999998
Q ss_pred Hhhh---hHhhcceEEEEEE------CCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCC
Q 001304 91 RYLS---DKKANEKEVWVVK------QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETD 161 (1104)
Q Consensus 91 ~~~~---~~~~n~~~~~V~r------~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~ 161 (1104)
..++ .+++.+.+++|+| ||++++|+++||||||||.|++||+|||||+|+++++ +.||||+|||||.
T Consensus 112 a~ka~~~L~~l~~~~~~V~R~~~~~~dg~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~li~g~~----l~VDES~LTGES~ 187 (867)
T TIGR01524 112 AERAAYALKNMVKNTATVLRVINENGNGSMDEVPIDALVPGDLIELAAGDIIPADARVISARD----LFINQSALTGESL 187 (867)
T ss_pred HHHHHHHHhhhccCeeEEEEecccCCCCeEEEEEhhcCCCCCEEEECCCCEEcccEEEEecCc----eEEEcccccCCCC
Confidence 8654 4666778999999 9999999999999999999999999999999997655 8999999999999
Q ss_pred ceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEe
Q 001304 162 LKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYT 241 (1104)
Q Consensus 162 ~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~t 241 (1104)
|+.|.+.... ..+....+.+|++|+||.+.+| .+.++|++|
T Consensus 188 PV~K~~~~~~--------------------------------------~~~~~~~~~~n~vfaGT~v~~G-~~~~~V~~t 228 (867)
T TIGR01524 188 PVEKFVEDKR--------------------------------------ARDPEILERENLCFMGTNVLSG-HAQAVVLAT 228 (867)
T ss_pred cccccCCccc--------------------------------------cccccccccccceecCCeEEEe-EEEEEEEEE
Confidence 9999653100 0111123678999999999998 699999999
Q ss_pred cCccccccccCC--CCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHH
Q 001304 242 GNETKLGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRF 319 (1104)
Q Consensus 242 G~~T~~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (1104)
|.+|.+|++... .+.+++++++.+++++.++..+.++++++.++++.+. ..+|...+..++
T Consensus 229 G~~T~~gki~~~v~~~~~~t~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~---------------~~~~~~~~~~al-- 291 (867)
T TIGR01524 229 GSSTWFGSLAIAATERRGQTAFDKGVKSVSKLLIRFMLVMVPVVLMINGLM---------------KGDWLEAFLFAL-- 291 (867)
T ss_pred cCccHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHheehHHHh---------------cCCHHHHHHHHH--
Confidence 999999987542 2455689999999999888777766665544432111 113444444443
Q ss_pred HHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEe
Q 001304 320 ELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIG 399 (1104)
Q Consensus 320 ~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~ 399 (1104)
.+++.++|++||+.+.++....+. +|.++ ++++|+++.+|+||++++||||||||||+|+|++.+++..
T Consensus 292 -~l~v~~iP~~Lp~~vt~~la~g~~------~mak~----~ilvk~l~aiE~lg~v~vic~DKTGTLT~~~m~v~~~~~~ 360 (867)
T TIGR01524 292 -AVAVGLTPEMLPMIVSSNLAKGAI------NMSKK----KVIVKELSAIQNFGAMDILCTDKTGTLTQDKIELEKHIDS 360 (867)
T ss_pred -HHHHHhCcchHHHHHHHHHHHHHH------HHHhC----CcEEccchhhhhccCccEEEecCCCccccCeEEEEEEecC
Confidence 367789999998766665555544 45544 4899999999999999999999999999999999886411
Q ss_pred cEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCc
Q 001304 400 GIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNAS 479 (1104)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~ 479 (1104)
. + ....+++...++|+... ...+||.|.|+++++.+.+..
T Consensus 361 ~-------~----------------~~~~~~l~~a~l~~~~~----------~~~~~p~~~Al~~~~~~~~~~------- 400 (867)
T TIGR01524 361 S-------G----------------ETSERVLKMAWLNSYFQ----------TGWKNVLDHAVLAKLDESAAR------- 400 (867)
T ss_pred C-------C----------------CCHHHHHHHHHHhCCCC----------CCCCChHHHHHHHHHHhhchh-------
Confidence 0 0 00122333334433211 114699999999998753210
Q ss_pred EEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC-----------CchhHHHHHHH
Q 001304 480 ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVE 548 (1104)
Q Consensus 480 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~-----------~~~~~~~~~~~ 548 (1104)
.....++.++.+||||+||+|++++++. ++.+.+++|||||.++++|+.. +..+++.+.++
T Consensus 401 -------~~~~~~~~~~~~pF~s~~k~ms~~v~~~-~~~~~~~~KGa~e~il~~c~~~~~~~~~~~l~~~~~~~i~~~~~ 472 (867)
T TIGR01524 401 -------QTASRWKKVDEIPFDFDRRRLSVVVENR-AEVTRLICKGAVEEMLTVCTHKRFGGAVVTLSESEKSELQDMTA 472 (867)
T ss_pred -------hHhhcCceEEEeccCCCcCEEEEEEEcC-CceEEEEEeCcHHHHHHhchhhhcCCceecCCHHHHHHHHHHHH
Confidence 1123567788899999999999999864 3467899999999999999631 11346778889
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHc
Q 001304 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (1104)
Q Consensus 549 ~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~a 628 (1104)
+++++|+|++++|||+++.++.. + .+..|+||+|+|+++++||+|++++++|++|+++
T Consensus 473 ~~a~~G~rvlavA~~~~~~~~~~-~---------------------~~~~e~~l~~lGli~l~Dp~R~~~~~aI~~l~~a 530 (867)
T TIGR01524 473 EMNRQGIRVIAVATKTLKVGEAD-F---------------------TKTDEEQLIIEGFLGFLDPPKESTKEAIAALFKN 530 (867)
T ss_pred HHHhcCCEEEEEEEeccCccccc-c---------------------cccccCCcEEEEEEEeeCCCchhHHHHHHHHHHC
Confidence 99999999999999998654310 0 0123689999999999999999999999999999
Q ss_pred CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHH
Q 001304 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (1104)
Q Consensus 629 GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~ 708 (1104)
||+++|+|||+..||.++|+++||...+ .+.|. .++...+
T Consensus 531 GI~vvmiTGD~~~tA~aIA~~lGI~~~~------v~~g~---------------------------------~l~~~~~- 570 (867)
T TIGR01524 531 GINVKVLTGDNEIVTARICQEVGIDAND------FLLGA---------------------------------DIEELSD- 570 (867)
T ss_pred CCEEEEEcCCCHHHHHHHHHHcCCCCCC------eeecH---------------------------------hhhhCCH-
Confidence 9999999999999999999999995321 12222 2222111
Q ss_pred HHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-hhcceeccc
Q 001304 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADYSIGK 787 (1104)
Q Consensus 709 ~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~AD~vl~~ 787 (1104)
+.+.+ ...+..+|+|++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| | +|++++ ++||++|++
T Consensus 571 --~el~~--~~~~~~vfAr~~Pe~K~~iV~~lq~~G~vVam~GDGvNDapALk~AdVGIAm-g-~gtdvAk~aADiVLld 644 (867)
T TIGR01524 571 --EELAR--ELRKYHIFARLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISV-D-TAADIAKEASDIILLE 644 (867)
T ss_pred --HHHHH--HhhhCeEEEECCHHHHHHHHHHHHhCCCEEEEECCCcccHHHHHhCCEEEEe-C-CccHHHHHhCCEEEec
Confidence 11111 1345689999999999999999999999999999999999999999999999 6 455554 599999998
Q ss_pred chhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCC
Q 001304 788 FRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLS 866 (1104)
Q Consensus 788 f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~ 866 (1104)
+++-... .+.+||.+|+|+++.+.|.+..|+...+..++..++ .+..|+.+.|++|+|+++| +|++++++| ++
T Consensus 645 d~~~~I~~ai~~gR~i~~ni~k~i~~~ls~n~~~~~~~~~~~~~---~~~~pl~~~qil~inl~~d-~~~~al~~~--~~ 718 (867)
T TIGR01524 645 KSLMVLEEGVIEGRNTFGNILKYLKMTASSNFGNVFSVLVASAF---IPFLPMLSLHLLIQNLLYD-FSQLTLPWD--KM 718 (867)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHH-HHHHhhcCC--CC
Confidence 8875554 468999999999999999988887655544443332 2235789999999999999 799998888 58
Q ss_pred chhhccCCccccccccCcccCchhhHHHHHHHHHHHH---HHHHHhhheeeccccc----ceeeeehhhhHHHHHHHHhh
Q 001304 867 EGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAI---VAFVISIHVYAYEKSE----MEEVSMVALSGCIWLQAFVV 939 (1104)
Q Consensus 867 ~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~---v~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 939 (1104)
++.+|++|+.+.. + .....++..|++.++ ..|++.+..+...... .++..|..+..+.+++.|++
T Consensus 719 ~~~~m~~p~~~~~----~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~~~~~~~~~~~~~ 790 (867)
T TIGR01524 719 DREFLKKPHQWEQ----K----GMGRFMLCIGPVSSIFDIATFLLMWFVFSANTVEEQALFQSGWFVVGLLSQTLVVHMI 790 (867)
T ss_pred ChHhhCCCCCCCh----h----hHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 8889998874321 1 111122234443332 2222222222111000 12222333334444445555
Q ss_pred hhccccchHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 001304 940 ALETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSS 974 (1104)
Q Consensus 940 ~~~~~~~~~~~~~~i~~sii~~~i~~~~~~~vp~~ 974 (1104)
|.... ..+.+...+..+++.++++++..++|+.
T Consensus 791 R~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~p~~ 823 (867)
T TIGR01524 791 RTEKI--PFIQSRAAAPVMIATLLVMALGIIIPFS 823 (867)
T ss_pred CcCCC--CcCcchHHHHHHHHHHHHHHHHHHhchh
Confidence 55432 2234555666666666666667777763
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-93 Score=881.55 Aligned_cols=631 Identities=21% Similarity=0.228 Sum_probs=494.1
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~ 91 (1104)
+|+++||+|+++..+.+.| +.|++||.+++++.+++.++++++.+ .+...+.+++++++++..+++++++.
T Consensus 9 ~r~~~~G~N~~~~~~~~~~----~~~~~~~~~~~~~lL~~aa~~s~~~~-----~~~~~~~i~~~~~i~~~i~~~qe~~a 79 (755)
T TIGR01647 9 KRLAKYGPNELPEKKVSPL----LKFLGFFWNPLSWVMEAAAIIAIALE-----NWVDFVIILGLLLLNATIGFIEENKA 79 (755)
T ss_pred HHHHhcCCCCCCCCCCCHH----HHHHHHHhchHHHHHHHHHHHHHhhc-----chhhhhhhhhhhHHHHHHHHHHHHHH
Confidence 5889999999998666654 78899999999988888888887653 22233445566677888899999998
Q ss_pred hhhh---HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecc
Q 001304 92 YLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1104)
Q Consensus 92 ~~~~---~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 168 (1104)
.++. +++.+.+++|+|||++++|+++||+|||||.|++||+|||||+|+++++ +.||||+|||||.|+.|
T Consensus 80 ~~~~~~L~~~~~~~~~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~vi~g~~----~~VDeS~LTGES~PV~K--- 152 (755)
T TIGR01647 80 GNAVEALKQSLAPKARVLRDGKWQEIPASELVPGDVVRLKIGDIVPADCRLFEGDY----IQVDQAALTGESLPVTK--- 152 (755)
T ss_pred HHHHHHHHhhCCCeEEEEECCEEEEEEhhhCcCCCEEEECCCCEEeceEEEEecCc----eEEEcccccCCccceEe---
Confidence 7654 5567889999999999999999999999999999999999999996544 99999999999999999
Q ss_pred ccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccc
Q 001304 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248 (1104)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~ 248 (1104)
..+|.+|+||.+.+| .+.++|++||.+|.+|
T Consensus 153 ------------------------------------------------~~~~~v~aGT~v~~G-~~~~~V~~tG~~T~~g 183 (755)
T TIGR01647 153 ------------------------------------------------KTGDIAYSGSTVKQG-EAEAVVTATGMNTFFG 183 (755)
T ss_pred ------------------------------------------------ccCCeeeccCEEEcc-EEEEEEEEcCCccHHH
Confidence 345789999999998 6999999999999999
Q ss_pred cccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhc
Q 001304 249 MTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSI 325 (1104)
Q Consensus 249 ~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (1104)
++.+ ..+..++++++.+++++.++.++.++++++.+++++... ..++...+..++ .+++.
T Consensus 184 ~i~~lv~~~~~~~~~lq~~~~~i~~~~~~~~~~~~~i~~~~~~~~~--------------~~~~~~~~~~~i---~vlv~ 246 (755)
T TIGR01647 184 KAAALVQSTETGSGHLQKILSKIGLFLIVLIGVLVLIELVVLFFGR--------------GESFREGLQFAL---VLLVG 246 (755)
T ss_pred HHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------------CCCHHHHHHHHH---HHHHH
Confidence 8654 445567899999999998887777666665554432211 123444444333 37788
Q ss_pred cccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecC
Q 001304 326 MIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 405 (1104)
Q Consensus 326 ~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 405 (1104)
++|++|++.+.++....+. +|.++ ++++|+++.+|+||++++||||||||||+|+|++.+++..+..+
T Consensus 247 a~P~~Lp~~~~~~la~g~~------r~ak~----gilvk~l~alE~lg~v~~i~~DKTGTLT~~~~~v~~~~~~~~~~-- 314 (755)
T TIGR01647 247 GIPIAMPAVLSVTMAVGAA------ELAKK----KAIVTRLTAIEELAGMDILCSDKTGTLTLNKLSIDEILPFFNGF-- 314 (755)
T ss_pred hCCcchHHHHHHHHHHHHH------HHHhC----CeEEcccHHHHhccCCcEEEecCCCccccCceEEEEEEecCCCC--
Confidence 9999998766666555544 55544 48999999999999999999999999999999999987542100
Q ss_pred CCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEe
Q 001304 406 ETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485 (1104)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~ 485 (1104)
+..+++...++|+.. ..+||.|.|+++++++.+.
T Consensus 315 --------------------~~~~~l~~a~~~~~~------------~~~~pi~~Ai~~~~~~~~~-------------- 348 (755)
T TIGR01647 315 --------------------DKDDVLLYAALASRE------------EDQDAIDTAVLGSAKDLKE-------------- 348 (755)
T ss_pred --------------------CHHHHHHHHHHhCCC------------CCCChHHHHHHHHHHHhHH--------------
Confidence 011344455555421 1479999999998876431
Q ss_pred CCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC-chhHHHHHHHHHHhccceEEEEEEEe
Q 001304 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-QTRTFVEAVEQYSQLGLRTLCLAWRE 564 (1104)
Q Consensus 486 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~-~~~~~~~~~~~~a~~GlR~l~~A~k~ 564 (1104)
....|++++.+||++.+|+|+++++.+.+|+.++++|||||.++++|+... .++++.+.+++++.+|+|++++|||+
T Consensus 349 --~~~~~~~~~~~pf~~~~k~~~~~v~~~~~g~~~~~~kGa~e~il~~c~~~~~~~~~~~~~~~~~~~~G~rvl~vA~~~ 426 (755)
T TIGR01647 349 --ARDGYKVLEFVPFDPVDKRTEATVEDPETGKRFKVTKGAPQVILDLCDNKKEIEEKVEEKVDELASRGYRALGVARTD 426 (755)
T ss_pred --HHhcCceEEEeccCCCCCeEEEEEEeCCCceEEEEEeCChHHHHHhcCCcHHHHHHHHHHHHHHHhCCCEEEEEEEEc
Confidence 123467788999999999999999876557788899999999999997532 34567888999999999999999972
Q ss_pred cCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHH
Q 001304 565 VEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI 644 (1104)
Q Consensus 565 l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~ 644 (1104)
. |++|+|+|+++++||+|++++++|++|+++||+++|+|||++.||.
T Consensus 427 ~---------------------------------e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~ 473 (755)
T TIGR01647 427 E---------------------------------EGRWHFLGLLPLFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAK 473 (755)
T ss_pred C---------------------------------CCCcEEEEEeeccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHH
Confidence 1 3789999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhcccee
Q 001304 645 QIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAI 724 (1104)
Q Consensus 645 ~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i 724 (1104)
++|+++||..+.. .+. ++ .+|+.++...+ +.+.+ ...+..+
T Consensus 474 ~IA~~lGI~~~~~-------~~~---~l------------------------~~~~~~~~~~~---~~~~~--~~~~~~v 514 (755)
T TIGR01647 474 ETARRLGLGTNIY-------TAD---VL------------------------LKGDNRDDLPS---GELGE--MVEDADG 514 (755)
T ss_pred HHHHHcCCCCCCc-------CHH---Hh------------------------cCCcchhhCCH---HHHHH--HHHhCCE
Confidence 9999999954210 000 00 00111000000 01111 1234679
Q ss_pred eeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-hhcceecccchhhHHH-HHhhhhhh
Q 001304 725 CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADYSIGKFRFLKRL-ILVHGRYS 802 (1104)
Q Consensus 725 ~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~AD~vl~~f~~l~~l-ll~~GR~~ 802 (1104)
|+|++|+||.++|+.+|+.|++|+|+|||+||+|||++||||||| |+ +++++ ++||++|+++++.... .+.+||.+
T Consensus 515 fAr~~Pe~K~~iV~~lq~~G~~VamvGDGvNDapAL~~AdVGIAm-~~-gtdvAkeaADivLl~d~l~~I~~ai~~gR~~ 592 (755)
T TIGR01647 515 FAEVFPEHKYEIVEILQKRGHLVGMTGDGVNDAPALKKADVGIAV-AG-ATDAARSAADIVLTEPGLSVIVDAILESRKI 592 (755)
T ss_pred EEecCHHHHHHHHHHHHhcCCEEEEEcCCcccHHHHHhCCeeEEe-cC-CcHHHHHhCCEEEEcCChHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 64 45554 5999999998886555 46899999
Q ss_pred hhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccC
Q 001304 803 YNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDK 863 (1104)
Q Consensus 803 ~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~ 863 (1104)
|+|+++.+.|.+..|+...+..++..++.+ .+ ++++|++|.|++++. |.+++++|+
T Consensus 593 ~~ni~k~i~~~~~~n~~~~~~~~~~~l~~~---~~-l~~~~il~~~l~~d~-~~~~l~~~~ 648 (755)
T TIGR01647 593 FQRMKSYVIYRIAETIRIVFFFGLLILILN---FY-FPPIMVVIIAILNDG-TIMTIAYDN 648 (755)
T ss_pred HHHHHHHHHHHhcccHHHHHHHHHHHHHhC---cc-hhHHHHHHHHHHHhH-hHhhccCCC
Confidence 999999999999998876554444333323 23 899999999999996 688888986
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-94 Score=820.02 Aligned_cols=868 Identities=20% Similarity=0.231 Sum_probs=648.1
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccccc--------CCcchhhHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPV--------NPASTWGPLIFIFAVSATK 83 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~--------~~~~~~~~l~~i~~i~~~~ 83 (1104)
+++.+-|+|.++.+|.+.- +..+.+|+...+.+.+++.++++++...... +....-+.|..++.++.+.
T Consensus 66 ~~L~rdG~NaL~Ppk~t~~---wikf~kq~f~~~~ill~~~a~l~~~~y~~~~s~~~~~~~~nly~giiL~~vv~vtg~~ 142 (1019)
T KOG0203|consen 66 EKLARDGPNALTPPKTTPE---WIKFLRQLFGGFSILLWIGAILCFVAYGIQASTEDDPSDDNLYLGIVLAAVVIVTGLF 142 (1019)
T ss_pred hhhccCCCCCCCCCCCChH---HHHHHHHHhhhHHHHHHHHHHHHHHHHhhhcccCCCCCCcceEEEEEEEEEEEEEecC
Confidence 4677899999999887541 2668899999988888888888776432111 1111224455566667777
Q ss_pred HHHHHHHHh---hhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCC
Q 001304 84 EAWDDYNRY---LSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (1104)
Q Consensus 84 ~~~~d~~~~---~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs 160 (1104)
.++|+.+.. .+.+.+.+..|+|+|||....+..+++||||+|.++-||+||||++++++.+ |+||+|+|||||
T Consensus 143 ~~~qe~ks~~im~sF~~l~P~~~~ViRdg~k~~i~~eelVvGD~v~vk~GdrVPADiRiis~~g----~~vdnsslTGes 218 (1019)
T KOG0203|consen 143 SYYQEAKSSKIMDSFKNLVPQQALVIRDGEKMTINAEELVVGDLVEVKGGDRVPADIRIISATG----CKVDNSSLTGES 218 (1019)
T ss_pred CCccchhhHHHHHHHhccchhhheeeecceeEEechhhcccccceeeccCCcccceeEEEEecc----eeEecccccccc
Confidence 788877653 4678888999999999999999999999999999999999999999999998 999999999999
Q ss_pred CceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEE
Q 001304 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240 (1104)
Q Consensus 161 ~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~ 240 (1104)
+|..+.+.. .+..|+...|+.+.+|.+..| .++|+|++
T Consensus 219 EP~~~~~~~-----------------------------------------t~~~~~Et~Ni~f~st~~veG-~~~givi~ 256 (1019)
T KOG0203|consen 219 EPQTRSPEF-----------------------------------------THENPLETRNIAFFSTNCVEG-TGRGIVIA 256 (1019)
T ss_pred CCccCCccc-----------------------------------------cccCchhheeeeeeeeEEecc-eEEEEEEe
Confidence 999885431 223346889999999999998 69999999
Q ss_pred ecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHH
Q 001304 241 TGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPL 317 (1104)
Q Consensus 241 tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (1104)
||.+|.+|+++. .....++++++++++++.++..+++++.+.+++++.... ..|...+..
T Consensus 257 tGd~Tv~G~ia~l~~~~~~~~t~~~~ei~~fi~~it~vAi~~~i~fF~~~~~~g---------------y~~l~avv~-- 319 (1019)
T KOG0203|consen 257 TGDRTVMGRIASLASGLEDGKTPIAKEIEHFIHIITGVAIFLGISFFILALILG---------------YEWLRAVVF-- 319 (1019)
T ss_pred cCCceEEeehhhhhccCCCCCCcchhhhhchHHHHHHHHHHHHHHHHHHHHhhc---------------chhHHHhhh--
Confidence 999999999876 456788999999999998888877776666655443221 133444433
Q ss_pred HHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEE
Q 001304 318 RFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCC 397 (1104)
Q Consensus 318 ~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~ 397 (1104)
++.++++.+|++|+++++.....-++ +|.+.+ |++||+.++|+||+.++||+|||||||+|+|+|.++|
T Consensus 320 -~i~iivAnvPeGL~~tvTv~Ltltak------rMa~Kn----c~vknLeavetlGsts~I~SDktGTlTqnrMtVahlw 388 (1019)
T KOG0203|consen 320 -LIGIIVANVPEGLLATVTVCLTLTAK------RMARKN----CLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHLW 388 (1019)
T ss_pred -hheeEEecCcCCccceehhhHHHHHH------HHhhce----eEEeeeeheeecccceeEeecceeeEEecceEEEeec
Confidence 34477889999999887777777666 565544 9999999999999999999999999999999999999
Q ss_pred EecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceee---ecCCccHHHHHHHHHhcCcEEE
Q 001304 398 IGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILY---KAQSQDEEALVHAAAQLHMVLV 474 (1104)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~---~~~~p~e~Al~~~a~~~g~~~~ 474 (1104)
.++.....+..+... -+.....++....+.++..+||.+.....+++.... ..|++.|.||++++.-.--.
T Consensus 389 ~d~~i~~~d~~~~~~----~~~~~~~~~~~~~l~r~~~lCn~a~~~~gq~dvPv~kk~v~G~~se~ALlk~~e~~~~~-- 462 (1019)
T KOG0203|consen 389 FDNQIHEADTTEDQS----GQSFDKSSATFIALSRIATLCNRAVFKPGQDDVPVLKRDVAGDASEVALLKFIELILGS-- 462 (1019)
T ss_pred cCCceeeeechhhhh----cccccccCchHHHHHHHHHHhCcceecccccCCceeeeeccCCHHHHHHHHHHHHhcch--
Confidence 988765443221110 111122356788899999999999877665554332 27999999999998643211
Q ss_pred eecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeC--CCCcEEEEecChHHhhhhhhcc----C-------Cchh
Q 001304 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHA----G-------QQTR 541 (1104)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~--~~~~~~l~~KGa~e~i~~~~~~----~-------~~~~ 541 (1104)
+..-++.++.+..+||+|.+|+.-.+.+.. .+.++.+.+|||||.++++|+. + +..+
T Consensus 463 ----------~~~~R~~~~kv~eipfNSt~Kyqlsih~~~d~~~~~~~l~mKGape~il~~CSTi~i~g~e~pld~~~~~ 532 (1019)
T KOG0203|consen 463 ----------VMELRERNPKVAEIPFNSTNKYQLSIHETEDPSDPRFLLVMKGAPERILDRCSTILINGEEKPLDEKLKE 532 (1019)
T ss_pred ----------HHHHHHhhHHhhcCCcccccceEEEEEecCCCCCccceeeecCChHHHHhhccceeecCCCCCcCHHHHH
Confidence 123356677888999999999998888754 2357899999999999999973 1 1135
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHH
Q 001304 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPET 621 (1104)
Q Consensus 542 ~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~ 621 (1104)
.+.+...++...|-||+.||++.++++++++...-.- ... ..--.+|.|+|++++-||+|..+|++
T Consensus 533 ~f~~ay~~lg~~GerVlgF~~~~l~~~~~p~~~~f~~---d~~-----------n~p~~nl~FlGl~s~idPPR~~vP~A 598 (1019)
T KOG0203|consen 533 AFQEAYLELGGLGERVLGFCDLELPDEKFPRGFQFDT---DDV-----------NFPTDNLRFLGLISMIDPPRAAVPDA 598 (1019)
T ss_pred HHHHHHHHhhhcchHHHHHHHHhcchhcCCCceEeec---CCC-----------CCcchhccccchhhccCCCcccCchh
Confidence 6788889999999999999999999877654321000 000 11235899999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchh
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 701 (1104)
+..|+.|||||.|+|||++.||.++|++.||+..... ..++..+ .....-...+.....+.|+.|.+
T Consensus 599 v~~CrsAGIkvimVTgdhpiTAkAiA~~vgIi~~~~e---------t~e~~a~----r~~~~v~~vn~~~a~a~VihG~e 665 (1019)
T KOG0203|consen 599 VGKCRSAGIKVIMVTGDHPITAKAIAKSVGIISEGSE---------TVEDIAK----RLNIPVEQVNSRDAKAAVIHGSE 665 (1019)
T ss_pred hhhhhhhCceEEEEecCccchhhhhhhheeeecCCch---------hhhhhHH----hcCCcccccCccccceEEEeccc
Confidence 9999999999999999999999999999998776542 1111111 11000011223345788999998
Q ss_pred HHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-h
Q 001304 702 LEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-A 780 (1104)
Q Consensus 702 l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~ 780 (1104)
|..+.++. +.++.......||||.||+||..||+..|+.|.+|+.+|||+||+||||.||||||| |-+|+++++ +
T Consensus 666 L~~~~~~q---ld~il~nh~eIVFARTSPqQKLiIVe~cQr~GaiVaVTGDGVNDsPALKKADIGVAM-GiaGSDvsKqA 741 (1019)
T KOG0203|consen 666 LPDMSSEQ---LDELLQNHQEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GIAGSDVSKQA 741 (1019)
T ss_pred ccccCHHH---HHHHHHhCCceEEEecCccceEEeEhhhhhcCcEEEEeCCCcCCChhhcccccceee-ccccchHHHhh
Confidence 87665432 223333445689999999999999999999999999999999999999999999999 877877776 8
Q ss_pred cceecccchhhHHHH-HhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchh-hhHHHHHHHHHHhhhhhhhh
Q 001304 781 ADYSIGKFRFLKRLI-LVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSL-FNSVSLMAYNVFYTSIPVLV 858 (1104)
Q Consensus 781 AD~vl~~f~~l~~ll-l~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~-~~~~~ll~~nl~~~~lp~~~ 858 (1104)
||++|+|++|.+.+- +.+||.+|+|++|.|.|.+..|+-=..+-++|. +.|.|+ +..+++|.+.+.+|.+|++.
T Consensus 742 ADmILLDDNFASIVtGVEEGRLiFDNLKKsIAYTLTsNipEI~PfL~fi----~~giPLplgtitIL~IDLgTDmvPAiS 817 (1019)
T KOG0203|consen 742 ADMILLDDNFASIVTGVEEGRLIFDNLKKSIAYTLTSNIPEITPFLLFI----LFGIPLPLGTVTILCIDLGTDIVPAIS 817 (1019)
T ss_pred cceEEecCcchhheeecccceehhhhHHHHHHHHHHhcchhHhHHHHHH----HhCCCcccchhhhhhhHhhcccchhhh
Confidence 999999999998873 789999999999999999998875443333332 345454 88999999999999999999
Q ss_pred hhccCCCCchhhccCCccccccccCcccCchhhHHHHH-HHHHHHHHHHHHhhheeeccc--------------------
Q 001304 859 STIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVYAYEK-------------------- 917 (1104)
Q Consensus 859 ~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~-------------------- 917 (1104)
+++|. +|.++|++||+ ..+.+++.|.+.+....+ -|.+|++.-|+..|..+....
T Consensus 818 LAYE~--aEsDIM~r~PR--~p~~D~LVN~rLi~~aY~qIG~iqa~agF~tYFvima~nGf~P~~L~~ir~~W~d~~~~D 893 (1019)
T KOG0203|consen 818 LAYEK--AESDIMLRPPR--NPKDDKLVNKRLISYSYLQIGMIQALAGFFTYFVIMAENGFLPRTLVGLREDWDDDGVND 893 (1019)
T ss_pred HhccC--chhhHHhcCCC--CCcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHhhHHhhhhhhhhh
Confidence 99994 99999999995 457889999998765544 588998887776654442110
Q ss_pred ---ccc---------------eeeeehhhhHHHHHHHHhhhhccccch--HHHHHHHHHHHHHHHHHHHHHhhcCCchhH
Q 001304 918 ---SEM---------------EEVSMVALSGCIWLQAFVVALETNSFT--VFQHLAIWGNLVAFYIINWIFSAIPSSGMY 977 (1104)
Q Consensus 918 ---~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~~sii~~~i~~~~~~~vp~~~~~ 977 (1104)
+.+ .+.-+++.+.++|+.++.+-.+.++.. =+.|+.++..++.-.++..++++.|...
T Consensus 894 l~DsyGQeWtyeqRk~le~tc~taFfvsIvV~Q~adLii~KTRRnSlfqqGmrN~vl~f~v~~e~~La~fl~y~pg~~-- 971 (1019)
T KOG0203|consen 894 LTDSYGQEWTYEQRKYLEYTCYTAFFISIVVVQWADLIICKTRRNSIFQQGMRNKVLIFAVIFETCLACFLCYCPGVL-- 971 (1019)
T ss_pred hhhhccccccHHHHHHHHHhhhhheeeeehHHhHhhHHhhhcchhHHHHhhhhhhhHHHHHHHHHHHHHHHhcCccHH--
Confidence 000 122233444455555555433333221 1345555555555556666777888754
Q ss_pred HHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 978 TIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 978 ~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
..+++.+ .+.||++-+-..++.++.+.+-|++-|.|
T Consensus 972 -~~l~~~pl~~~~wl~a~P~~ilIfvydE~Rk~~IR~~ 1008 (1019)
T KOG0203|consen 972 -YALGMYPLKFQWWLVAFPFGILIFVYDEVRKLFIRRY 1008 (1019)
T ss_pred -HHhccCCCCcEEEEecccceeeeeeHHHHHhHhhhhC
Confidence 3455543 66888877766777777778778776654
|
|
| >KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.7e-83 Score=737.41 Aligned_cols=781 Identities=19% Similarity=0.275 Sum_probs=530.4
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~ 91 (1104)
.|+.-||+|.+..+..+.+ ..|+.+--+|+.+|-.+..++ |..- +.+.+..-++++-+.++....+|..+.
T Consensus 168 ~r~~iyG~N~i~l~ik~i~----~iLv~EvL~PfYlFQ~fSv~l--W~~d---~Y~~YA~cI~iisv~Si~~sv~e~r~q 238 (1140)
T KOG0208|consen 168 DRRIIYGRNVISLPIKSIS----QILVKEVLNPFYLFQAFSVAL--WLAD---SYYYYAFCIVIISVYSIVLSVYETRKQ 238 (1140)
T ss_pred hHHhhcCCceeeeecccHH----HHHHHhccchHHHHHhHHhhh--hhcc---cchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3778899999999998876 667777666664333333333 2221 112222333444456777888888776
Q ss_pred hhhhHhhcc--eEEEEEECCeEEEEeccCCccceEEEEec-CCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecc
Q 001304 92 YLSDKKANE--KEVWVVKQGIKKLIQSQDIRVGNIVWLRE-NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1104)
Q Consensus 92 ~~~~~~~n~--~~~~V~r~g~~~~i~~~~lvvGDIV~l~~-g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 168 (1104)
.+..+++-. ..|+|+|||.+++|.++|||||||+.+.+ +-..|||++|+ +|.|.||||+|||||.|+.|.|.
T Consensus 239 s~rlr~mv~~~~~V~V~R~g~~~ti~S~eLVPGDil~i~~~~~~~PcDa~Li-----~g~civNEsmLTGESVPv~K~~l 313 (1140)
T KOG0208|consen 239 SIRLRSMVKFTCPVTVIRDGFWETVDSSELVPGDILYIPPPGKIMPCDALLI-----SGDCIVNESMLTGESVPVTKTPL 313 (1140)
T ss_pred HHHHHHHhcCCceEEEEECCEEEEEeccccccccEEEECCCCeEeecceEEE-----eCcEEeecccccCCcccccccCC
Confidence 666666643 47999999999999999999999999999 99999999999 78899999999999999999876
Q ss_pred ccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceecc-----CceEEEEEEEecC
Q 001304 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRN-----TEWACGVAVYTGN 243 (1104)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~-----~~~~~gvVv~tG~ 243 (1104)
+.-.+. +... .........|++|.||.+.. |+.+.|+|++||.
T Consensus 314 ~~~~~~-------~~~~-------------------------~~~~~~~~rh~lfcGT~vlq~r~~~g~~v~a~V~RTGF 361 (1140)
T KOG0208|consen 314 PMGTDS-------LDSI-------------------------TISMSTNSRHTLFCGTKVLQARAYLGGPVLAMVLRTGF 361 (1140)
T ss_pred cccccc-------CcCe-------------------------eechhhcCcceeeccceEEEeecCCCCceEEEEEeccc
Confidence 410000 0000 00001145789999999843 4578999999999
Q ss_pred ccccccccC-CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHh
Q 001304 244 ETKLGMTRG-IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELL 322 (1104)
Q Consensus 244 ~T~~~~~~~-~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 322 (1104)
.|.-|++.+ ...+|+.+++-.-+.+..+.++.++.++..+..+..+.. .+.+....+ ++.+.+
T Consensus 362 ~T~KGqLVRsilyPkP~~fkfyrds~~fi~~l~~ia~~gfiy~~i~l~~-------------~g~~~~~ii---irsLDl 425 (1140)
T KOG0208|consen 362 STTKGQLVRSILYPKPVNFKFYRDSFKFILFLVIIALIGFIYTAIVLNL-------------LGVPLKTII---IRSLDL 425 (1140)
T ss_pred cccccHHHHhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHhHhHHH-------------cCCCHHHHh---hhhhcE
Confidence 999998765 445565655555554433333333222222111111100 112333333 344457
Q ss_pred hhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEE
Q 001304 323 CSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIF 402 (1104)
Q Consensus 323 ~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~ 402 (1104)
+...+|++||.++++.-...-. ++.+ +++.|-++..+...|+++.+|||||||||++.+.+-.+..-...
T Consensus 426 iTi~VPPALPAaltvG~~~a~~------RLkk----k~IfCisP~rIn~~G~i~~~cFDKTGTLTEdGLDl~gv~~~~~~ 495 (1140)
T KOG0208|consen 426 ITIVVPPALPAALTVGIIYAQS------RLKK----KGIFCISPQRINLCGKLNLVCFDKTGTLTEDGLDLWGVVPVERN 495 (1140)
T ss_pred EEEecCCCchhhhhHHHHHHHH------HHHh----cCeEEcCccceeecceeeEEEEcCCCcccccceeEEEEEecccc
Confidence 8889999998777665443222 3333 35889999999999999999999999999999998877652211
Q ss_pred --ecCCCCcCCCch--hhhh-hhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeec
Q 001304 403 --YGNETGDALKDV--GLLN-AITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKN 477 (1104)
Q Consensus 403 --~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~ 477 (1104)
-+........+. ...+ ..+........+..++|.||+..... |.+ .|||.|.-+.+. .|+.+.+..
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a~atCHSL~~v~---g~l---~GDPLdlkmfe~---t~w~~ee~~ 566 (1140)
T KOG0208|consen 496 VDDGPELKVVTEDSLQLFYKLSLRSSSLPMGNLVAAMATCHSLTLVD---GTL---VGDPLDLKMFES---TGWVYEEAD 566 (1140)
T ss_pred ccccchhhhhhhhhccceeeccccccCCchHHHHHHHhhhceeEEeC---Cee---ccCceeeeeeec---cceEEEecc
Confidence 000000000000 0000 01111223457889999999877543 322 467776555443 344442211
Q ss_pred C-----------cEEEEEe-----C----CeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC
Q 001304 478 A-----------SILEIKF-----N----GSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG 537 (1104)
Q Consensus 478 ~-----------~~~~~~~-----~----~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~ 537 (1104)
. ....++. + ...+.+-+++.+||+|+.+|||||++.+++.+..+|+|||||.|.+.|+++
T Consensus 567 ~~~~~~~~~~~~~p~v~~p~~~~~~~~t~~~~~~~si~k~feF~S~LrRMSVIv~~~~e~~~~~ftKGaPE~I~~ic~p~ 646 (1140)
T KOG0208|consen 567 IEDEATREFNTLIPTVVRPPENAFNQSTECGEGEISIVKQFEFSSALRRMSVIVSTGGEDKMMVFTKGAPESIAEICKPE 646 (1140)
T ss_pred ccchhhhhhCCccCCEeCCCcccccCCCcCCCcceEEEEecccchhhheEEEEEecCCCCceEeeccCCHHHHHHhcCcc
Confidence 0 0011111 1 112379999999999999999999999888899999999999999999999
Q ss_pred CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCC
Q 001304 538 QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDG 617 (1104)
Q Consensus 538 ~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~ 617 (1104)
..+.++++.++.|+.+|+|++++|+|.++.. .|.+.. .-.++.+|+||+|+|++.+|++||++
T Consensus 647 tvP~dy~evl~~Yt~~GfRVIAlA~K~L~~~---~~~~~~--------------~~~Rd~vEs~l~FlGLiVmeNkLK~~ 709 (1140)
T KOG0208|consen 647 TVPADYQEVLKEYTHQGFRVIALASKELETS---TLQKAQ--------------KLSRDTVESNLEFLGLIVMENKLKEE 709 (1140)
T ss_pred cCCccHHHHHHHHHhCCeEEEEEecCccCcc---hHHHHh--------------hccHhhhhccceeeEEEEeecccccc
Confidence 9999999999999999999999999999875 343221 12347899999999999999999999
Q ss_pred hHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHH-------HHHHHHH-------HHc
Q 001304 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVC-------RSLERVL-------LTM 683 (1104)
Q Consensus 618 ~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-------~~~ 683 (1104)
++.+|++|++|+|+++|+||||..||+.+|++||++.+...-.+...+..+.+... +..+... +..
T Consensus 710 T~~VI~eL~~AnIRtVMcTGDNllTaisVakeCgmi~p~~~v~~~~~~~~~~~~~~~i~w~~ve~~~~~~~~~~~~~~~~ 789 (1140)
T KOG0208|consen 710 TKRVIDELNRANIRTVMCTGDNLLTAISVAKECGMIEPQVKVIIPELEPPEDDSIAQIVWLCVESQTQFLDPKEPDPDLA 789 (1140)
T ss_pred cHHHHHHHHhhcceEEEEcCCchheeeehhhcccccCCCCeEEEEeccCCccCCCceeEEEEccCccccCCCCccCcccc
Confidence 99999999999999999999999999999999999988765222222211111100 0000000 000
Q ss_pred c----ccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhh
Q 001304 684 R----ITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 759 (1104)
Q Consensus 684 ~----~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~m 759 (1104)
. .+.....++.+.++|+.+..+.++..+.+.++ ..+..|||||+|.||.++|+.+|+.|..|+|+|||+||+.|
T Consensus 790 ~~~~~~d~~~~~~yhlA~sG~~f~~i~~~~~~l~~~I--l~~~~VfARMsP~qK~~Lie~lQkl~y~VgfCGDGANDCgA 867 (1140)
T KOG0208|consen 790 SVKLSLDVLSEKDYHLAMSGKTFQVILEHFPELVPKI--LLKGTVFARMSPDQKAELIEALQKLGYKVGFCGDGANDCGA 867 (1140)
T ss_pred CCccChhhhccceeEEEecCchhHHHHhhcHHHHHHH--HhcCeEEeecCchhHHHHHHHHHhcCcEEEecCCCcchhhh
Confidence 0 11123457899999999999997777777665 34678999999999999999999999999999999999999
Q ss_pred hhhcCceEEecCCchHHHhhhcceecc--cchhhHHHHHhhhhhhhhhhhHHHHhHhhhhHHHH-HHHHHHHhhhccccc
Q 001304 760 IQKADIGVGISGREGLQAARAADYSIG--KFRFLKRLILVHGRYSYNRTAFLSQYSFYKSLLIC-FIQIFFSFISGLSGT 836 (1104)
Q Consensus 760 l~~AdvGIam~g~~~~~a~~~AD~vl~--~f~~l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~-~~~~~~~~~~~~~g~ 836 (1104)
||+|||||+++.+| |.-+|.|.-. +-+..-. ++.+||..+... |..+|.++++ .+||.-.++. +.-.
T Consensus 868 LKaAdvGISLSeaE---ASvAApFTSk~~~I~cVp~-vIrEGRaALVTS-----f~~FkYMalYs~iqFisv~~L-Y~~~ 937 (1140)
T KOG0208|consen 868 LKAADVGISLSEAE---ASVAAPFTSKTPSISCVPD-VIREGRAALVTS-----FACFKYMALYSAIQFISVVFL-YLIN 937 (1140)
T ss_pred hhhcccCcchhhhh---HhhcCccccCCCchhhHhH-HHhhhhhhhhhh-----HHHHHHHHHHHHHHHHhhhee-eeec
Confidence 99999999996555 6667777765 3333444 469999988776 4444555544 4455544433 3334
Q ss_pred hhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhh
Q 001304 837 SLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISI 910 (1104)
Q Consensus 837 ~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 910 (1104)
..++..|.+.+.++....-++++ ...|+.++..-++|+ ..+++++.+...+++.++..++-+.+++
T Consensus 938 ~nl~D~Qfl~iDLlii~pia~~m-~~~~a~~~L~~~rP~-------~~L~s~~~~~~l~~q~vli~l~q~i~~l 1003 (1140)
T KOG0208|consen 938 SNLGDLQFLFIDLLIITPIAVMM-SRFDASDKLFPKRPP-------TNLLSKKILVPLLLQIVLICLVQWILTL 1003 (1140)
T ss_pred ccccchhhhhhHHHHHHHHHHHH-ccCcHHHHhcCCCCC-------ccccccchhhhhHHHHHHHHHHHHhhhe
Confidence 45678888888877665444432 222345554445555 3677777777666666666555555544
|
|
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.3e-74 Score=683.95 Aligned_cols=541 Identities=18% Similarity=0.230 Sum_probs=400.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccc-----C--CcchhhHHHHHHHHHHHHHHH----HHHHHhhh---hHhhcce-EE
Q 001304 39 EQFSRFMNQYFLLIACLQLWSLITPV-----N--PASTWGPLIFIFAVSATKEAW----DDYNRYLS---DKKANEK-EV 103 (1104)
Q Consensus 39 ~qf~~~~n~~~l~~~~l~~~~~~~~~-----~--~~~~~~~l~~i~~i~~~~~~~----~d~~~~~~---~~~~n~~-~~ 103 (1104)
.+|++|+.+.+++.++++++....+. + .+..+. +.+++.++.+...+ .++|..++ .+++.+. ++
T Consensus 28 ~~~~~p~~~il~~aa~ls~~~~~~~~~~~~~~~~~~~~~~-i~~~l~~~~~~g~~~E~~ae~ra~~~~~~L~~~~~~~~a 106 (673)
T PRK14010 28 YMIKNPIMFVVEVGMLLALGLTIYPDLFHQESVSRLYVFS-IFIILLLTLVFANFSEALAEGRGKAQANALRQTQTEMKA 106 (673)
T ss_pred HHHHChHHHHHHHHHHHHHHHHHHhhhcccccccchhHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 46788888788888888776543211 1 011222 22333334333333 35555443 3445554 67
Q ss_pred E-EEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhhccc
Q 001304 104 W-VVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (1104)
Q Consensus 104 ~-V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 182 (1104)
+ |.|||++++|++++|+|||+|.|++||.|||||+++ +|.+.||||+|||||.|+.|++..
T Consensus 107 ~~v~rdg~~~~I~a~eLv~GDiV~v~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~------------- 168 (673)
T PRK14010 107 RRIKQDGSYEMIDASDLKKGHIVRVATGEQIPNDGKVI-----KGLATVDESAITGESAPVIKESGG------------- 168 (673)
T ss_pred EEEEeCCEEEEEEHHHcCCCCEEEECCCCcccCCeEEE-----EcceEEecchhcCCCCceeccCCC-------------
Confidence 6 679999999999999999999999999999999999 566899999999999999995310
Q ss_pred eeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccC---CCCCCcC
Q 001304 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (1104)
Q Consensus 183 ~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s 259 (1104)
+.++ +++||.+.+| ++.++|+.||.+|.+|++.. ..+.+++
T Consensus 169 ----------------------------------d~~~-V~aGT~v~~G-~~~i~Vta~g~~T~lgki~~lve~a~~~kt 212 (673)
T PRK14010 169 ----------------------------------DFDN-VIGGTSVASD-WLEVEITSEPGHSFLDKMIGLVEGATRKKT 212 (673)
T ss_pred ----------------------------------ccCe-eecCceeecc-eEEEEEEEecccCHHHHHHHHHhhccccCC
Confidence 1233 9999999998 89999999999999998754 4566789
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHH
Q 001304 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (1104)
Q Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~ 339 (1104)
|+|..+..+...+.++.+ +++..+.. +.. |. .+...+.+. ..+++.+||++|+..+.++.
T Consensus 213 p~e~~l~~l~~~l~ii~l--~~~~~~~~-~~~--------~~------~~~~~~~~~---val~V~~IP~aL~~~~~~~~ 272 (673)
T PRK14010 213 PNEIALFTLLMTLTIIFL--VVILTMYP-LAK--------FL------NFNLSIAML---IALAVCLIPTTIGGLLSAIG 272 (673)
T ss_pred HHHHHHHHHHHHHhHHHH--HHHHHHHH-HHh--------hc------cHHHHHHHH---HHHHHHhhhhhHHHHHHHHH
Confidence 999777665443322211 11111110 000 00 111111111 22455678999876555554
Q ss_pred HHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhh
Q 001304 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (1104)
Q Consensus 340 ~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1104)
..++. +|.++ ++++|++..+|+||++++||+|||||||+|++.+.++...+
T Consensus 273 ~~g~~------r~ak~----gvLvk~~~avE~lg~v~vI~~DKTGTLT~Gn~~~~~~~~~~------------------- 323 (673)
T PRK14010 273 IAGMD------RVTQF----NILAKSGRSVETCGDVNVLILDKTGTITYGNRMADAFIPVK------------------- 323 (673)
T ss_pred HHHHH------HHhhC----CEEEeCcHHHHHhhCCCEEEEeCCCcCCCCCeEEEEEEeCC-------------------
Confidence 44433 45444 49999999999999999999999999999776665543100
Q ss_pred hccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEec
Q 001304 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLE 499 (1104)
Q Consensus 420 ~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 499 (1104)
.....+++...++|+.. ..||.+.|+++++++.|+... ....+.+|
T Consensus 324 ----~~~~~~ll~~a~~~~~~-------------s~~P~~~AIv~~a~~~~~~~~-----------------~~~~~~~p 369 (673)
T PRK14010 324 ----SSSFERLVKAAYESSIA-------------DDTPEGRSIVKLAYKQHIDLP-----------------QEVGEYIP 369 (673)
T ss_pred ----CccHHHHHHHHHHhcCC-------------CCChHHHHHHHHHHHcCCCch-----------------hhhcceec
Confidence 01123455666667632 358999999999988765321 00113479
Q ss_pred cCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC--chhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001304 500 FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (1104)
Q Consensus 500 F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~--~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~ 577 (1104)
|++++|+|++.++ |+ .+.|||++.++++|.... .+.++.+.+++++++|+|+++++
T Consensus 370 F~~~~k~~gv~~~----g~--~i~kGa~~~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~v~---------------- 427 (673)
T PRK14010 370 FTAETRMSGVKFT----TR--EVYKGAPNSMVKRVKEAGGHIPVDLDALVKGVSKKGGTPLVVL---------------- 427 (673)
T ss_pred cccccceeEEEEC----CE--EEEECCHHHHHHHhhhcCCCCchHHHHHHHHHHhCCCeEEEEE----------------
Confidence 9999999998753 33 355999999999997432 23457778889999999999877
Q ss_pred HHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC
Q 001304 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 657 (1104)
Q Consensus 578 ~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~ 657 (1104)
.|++++|+++++|++|++++++|++||++||+++|+|||++.||.++|+++|+
T Consensus 428 ----------------------~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI----- 480 (673)
T PRK14010 428 ----------------------EDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATIAKEAGV----- 480 (673)
T ss_pred ----------------------ECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-----
Confidence 47899999999999999999999999999999999999999999999999998
Q ss_pred CCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHH
Q 001304 658 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 737 (1104)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV 737 (1104)
..+++|++|+||.++|
T Consensus 481 ----------------------------------------------------------------~~v~A~~~PedK~~iV 496 (673)
T PRK14010 481 ----------------------------------------------------------------DRFVAECKPEDKINVI 496 (673)
T ss_pred ----------------------------------------------------------------ceEEcCCCHHHHHHHH
Confidence 2367899999999999
Q ss_pred HHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhh
Q 001304 738 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFY 815 (1104)
Q Consensus 738 ~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~ 815 (1104)
+.+|+.|+.|+|+|||+||+|+|++||||||| | +|+++++ +||++++++++-+.. .+.+||.+|.|+.+++.|.+.
T Consensus 497 ~~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-g-sGTdvAkeAADiVLldd~ls~Iv~av~~gR~i~~n~~~~~~f~~~ 574 (673)
T PRK14010 497 REEQAKGHIVAMTGDGTNDAPALAEANVGLAM-N-SGTMSAKEAANLIDLDSNPTKLMEVVLIGKQLLMTRGSLTTFSIA 574 (673)
T ss_pred HHHHhCCCEEEEECCChhhHHHHHhCCEEEEe-C-CCCHHHHHhCCEEEcCCCHHHHHHHHHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999999999999999 6 4556555 999999998886555 468999999999999999999
Q ss_pred hhHHHHHHHHHHHhhhc
Q 001304 816 KSLLICFIQIFFSFISG 832 (1104)
Q Consensus 816 k~~~~~~~~~~~~~~~~ 832 (1104)
-|+.-+|..+...|...
T Consensus 575 ~~~~~~~~i~~a~~~~~ 591 (673)
T PRK14010 575 NDIAKYFAILPAMFMAA 591 (673)
T ss_pred ccHHHHHHHHHHHHHHh
Confidence 99887766555444433
|
|
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-72 Score=674.72 Aligned_cols=528 Identities=21% Similarity=0.225 Sum_probs=398.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccc------CCcchhhH---HHHHHHHHHHHHHHHHHHHhhh---hHhhcce-EEEE
Q 001304 39 EQFSRFMNQYFLLIACLQLWSLITPV------NPASTWGP---LIFIFAVSATKEAWDDYNRYLS---DKKANEK-EVWV 105 (1104)
Q Consensus 39 ~qf~~~~n~~~l~~~~l~~~~~~~~~------~~~~~~~~---l~~i~~i~~~~~~~~d~~~~~~---~~~~n~~-~~~V 105 (1104)
.||++++.+.+++.++++++..+.+. .....|.. +++.+++....+.++++|..++ .+++.+. +++|
T Consensus 29 ~~~~~p~~~vl~~~a~ls~~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~~~~~e~~ae~ra~~~~~sL~~l~~~~~a~v 108 (679)
T PRK01122 29 VQIRNPVMFVVEVGSILTTILTIAPLLFQSGGPAGFNLAITLWLWFTVLFANFAEALAEGRGKAQADSLRGAKKDTFARK 108 (679)
T ss_pred HHhhChHHHHHHHHHHHHHHHHhhhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 58999998888888888877643221 12233322 2233334555566777776654 3444554 7999
Q ss_pred EECCe-EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhhcccee
Q 001304 106 VKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKG 184 (1104)
Q Consensus 106 ~r~g~-~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~ 184 (1104)
+|+|+ +++|++++|+|||+|.|++||.|||||+++ +|.+.||||+|||||.|+.|++..
T Consensus 109 ir~g~~~~~V~~~eL~~GDiV~v~~Gd~IPaDG~vi-----eG~a~VDESaLTGES~PV~K~~G~--------------- 168 (679)
T PRK01122 109 LREPGAAEEVPATELRKGDIVLVEAGEIIPADGEVI-----EGVASVDESAITGESAPVIRESGG--------------- 168 (679)
T ss_pred EECCCEEEEEEHHHcCCCCEEEEcCCCEEEEEEEEE-----EccEEEEcccccCCCCceEeCCCC---------------
Confidence 99988 899999999999999999999999999999 566899999999999999995321
Q ss_pred EEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccC---CCCCCcChH
Q 001304 185 VIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAV 261 (1104)
Q Consensus 185 ~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l 261 (1104)
+..+ +++||.+.+| ++.+.|+.+|.+|.++++.. ..+.+++|+
T Consensus 169 --------------------------------~~~~-V~aGT~v~~G-~~~i~Vta~g~~S~lgki~~lve~a~~~ktp~ 214 (679)
T PRK01122 169 --------------------------------DFSS-VTGGTRVLSD-WIVIRITANPGESFLDRMIALVEGAKRQKTPN 214 (679)
T ss_pred --------------------------------ccCe-EEeceEEEee-eEEEEEEEecccCHHHHHHHHHHhccccCCHH
Confidence 1223 9999999998 79999999999999998754 455667999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHH
Q 001304 262 DAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSL 341 (1104)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~ 341 (1104)
|..++.+...++.+.+++++.+..+. ||. +.++ .+... +.+++.++|++|+..+..+...
T Consensus 215 e~al~~l~~~l~~i~l~~~~~~~~~~-----------~~~----g~~~--~l~~~---iallV~aiP~alg~l~~~i~i~ 274 (679)
T PRK01122 215 EIALTILLAGLTIIFLLVVATLPPFA-----------AYS----GGAL--SITVL---VALLVCLIPTTIGGLLSAIGIA 274 (679)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHH-----------HHh----CchH--HHHHH---HHHHHHcccchhhhHHHHHHHH
Confidence 98888776655544333332222211 111 0111 12222 3367788999875444433333
Q ss_pred HHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhc
Q 001304 342 YAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAIT 421 (1104)
Q Consensus 342 ~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (1104)
.+. +|.+. ++++|+..++|+||++++||+|||||||+|+|++.+++..+.
T Consensus 275 g~~------r~ak~----gvLvk~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~-------------------- 324 (679)
T PRK01122 275 GMD------RVLQA----NVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFLPVPG-------------------- 324 (679)
T ss_pred HHH------HHhcC----CeeecCchHHHHhcCCCEEEEeCCCCCcCCcEEEEEEEeCCC--------------------
Confidence 322 45444 489999999999999999999999999999999988753110
Q ss_pred cCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHh-cCcEEEeecCcEEEEEeCCeeEEEEEEEEecc
Q 001304 422 SGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ-LHMVLVNKNASILEIKFNGSVLQYEILETLEF 500 (1104)
Q Consensus 422 ~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~-~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F 500 (1104)
.+..+++.+.++|+.. ..+|...|+++++++ .+... ....++..+.+||
T Consensus 325 ---~~~~~ll~~a~~~s~~-------------s~hP~~~AIv~~a~~~~~~~~--------------~~~~~~~~~~~pF 374 (679)
T PRK01122 325 ---VTEEELADAAQLSSLA-------------DETPEGRSIVVLAKQRFNLRE--------------RDLQSLHATFVPF 374 (679)
T ss_pred ---CCHHHHHHHHHHhcCC-------------CCCchHHHHHHHHHhhcCCCc--------------hhhccccceeEee
Confidence 0112455556666532 246889999999976 34311 0112455678899
Q ss_pred CCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC--CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHH
Q 001304 501 TSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFK 578 (1104)
Q Consensus 501 ~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~--~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~ 578 (1104)
++.+|+|++.++ | ..|+|||++.+++.|... ..++++++.+++++++|+|++++|
T Consensus 375 ~s~~~~~gv~~~----g--~~~~kGa~e~il~~~~~~g~~~~~~~~~~~~~~a~~G~~~l~va----------------- 431 (679)
T PRK01122 375 SAQTRMSGVDLD----G--REIRKGAVDAIRRYVESNGGHFPAELDAAVDEVARKGGTPLVVA----------------- 431 (679)
T ss_pred cCcCceEEEEEC----C--EEEEECCHHHHHHHHHhcCCcChHHHHHHHHHHHhCCCcEEEEE-----------------
Confidence 999998887652 3 478999999999999642 224678888999999999999999
Q ss_pred HHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCC
Q 001304 579 EASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPK 658 (1104)
Q Consensus 579 ~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~ 658 (1104)
.|++++|+++++|++|+|++++|++||++||+++|+|||++.||.+||+++|+
T Consensus 432 ---------------------~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~elGI------ 484 (679)
T PRK01122 432 ---------------------EDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGV------ 484 (679)
T ss_pred ---------------------ECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC------
Confidence 36789999999999999999999999999999999999999999999999998
Q ss_pred CeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHH
Q 001304 659 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVE 738 (1104)
Q Consensus 659 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~ 738 (1104)
..+++|++|+||.++|+
T Consensus 485 ---------------------------------------------------------------d~v~A~~~PedK~~iV~ 501 (679)
T PRK01122 485 ---------------------------------------------------------------DDFLAEATPEDKLALIR 501 (679)
T ss_pred ---------------------------------------------------------------cEEEccCCHHHHHHHHH
Confidence 23678999999999999
Q ss_pred HHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhh
Q 001304 739 LLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFY 815 (1104)
Q Consensus 739 ~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~ 815 (1104)
.+|+.|+.|+|+|||+||+|||++||||||| | +|+++++ +||++++|+++-+.. .+.+||.....--.+..|++.
T Consensus 502 ~lQ~~G~~VaMtGDGvNDAPALa~ADVGIAM-g-sGTdvAkeAADiVLldd~~s~Iv~av~~GR~~~~tr~~~~~f~~~ 578 (679)
T PRK01122 502 QEQAEGRLVAMTGDGTNDAPALAQADVGVAM-N-SGTQAAKEAGNMVDLDSNPTKLIEVVEIGKQLLMTRGALTTFSIA 578 (679)
T ss_pred HHHHcCCeEEEECCCcchHHHHHhCCEeEEe-C-CCCHHHHHhCCEEEeCCCHHHHHHHHHHHHHHHhhhHhhhhhhHH
Confidence 9999999999999999999999999999999 6 4656555 999999998886555 468999887644444455544
|
|
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-69 Score=643.19 Aligned_cols=545 Identities=20% Similarity=0.216 Sum_probs=404.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccc------cC---CcchhhH--HHHHHHHHHHHHHHHHHHHhhhhHh---hcce-EE
Q 001304 39 EQFSRFMNQYFLLIACLQLWSLITP------VN---PASTWGP--LIFIFAVSATKEAWDDYNRYLSDKK---ANEK-EV 103 (1104)
Q Consensus 39 ~qf~~~~n~~~l~~~~l~~~~~~~~------~~---~~~~~~~--l~~i~~i~~~~~~~~d~~~~~~~~~---~n~~-~~ 103 (1104)
.||+++..+.+++.++++++..+.+ .. ++...+. +++.+++....+.++++|..++..+ +.+. .+
T Consensus 28 ~~~~~p~~~il~~~a~is~~l~~~~~~~~~~~~~~~~~~~~i~~~l~~~vl~g~~~e~~ae~ra~~~~~~L~~~~~~~~a 107 (675)
T TIGR01497 28 AQWRNPVMFIVWVGSLLTTCITIAPASFGMPGNNLALFNAIITGILFITVLFANFAEAVAEGRGKAQADSLKGTKKTTFA 107 (675)
T ss_pred HHhhChHHHHHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCceE
Confidence 5899999877777788877754321 01 2211111 2222344555677777777665443 3444 58
Q ss_pred EEEE-CCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhhccc
Q 001304 104 WVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKI 182 (1104)
Q Consensus 104 ~V~r-~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~ 182 (1104)
+|+| ||++++|++++|+|||+|.|++||+|||||+++ +|.+.||||+|||||.|+.|++..
T Consensus 108 ~vlr~dg~~~~V~~~~L~~GDiV~V~~Gd~IPaDG~vi-----eG~~~VDESaLTGES~PV~K~~g~------------- 169 (675)
T TIGR01497 108 KLLRDDGAIDKVPADQLKKGDIVLVEAGDVIPCDGEVI-----EGVASVDESAITGESAPVIKESGG------------- 169 (675)
T ss_pred EEEeeCCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EccEEEEcccccCCCCceeecCCC-------------
Confidence 8886 899999999999999999999999999999999 566999999999999999995321
Q ss_pred eeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccccccC---CCCCCcC
Q 001304 183 KGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLT 259 (1104)
Q Consensus 183 ~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s 259 (1104)
....+++||.+.+| ++.++|+.+|.+|.++++.. ..+.+++
T Consensus 170 -----------------------------------~~~~V~aGT~v~~G-~~~i~Vt~~g~~S~lgri~~lve~a~~~kt 213 (675)
T TIGR01497 170 -----------------------------------DFASVTGGTRILSD-WLVVECTANPGETFLDRMIALVEGAQRRKT 213 (675)
T ss_pred -----------------------------------CcceeecCcEEEee-EEEEEEEEecccCHHHHHHHHHHhcccCCC
Confidence 01138999999998 89999999999999998754 4556679
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHH
Q 001304 260 AVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVK 339 (1104)
Q Consensus 260 ~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~ 339 (1104)
|+|..++.+...+.++.+++++...... .| ....+ .+... +.+++.++|++|......+.
T Consensus 214 plq~~l~~l~~~l~~v~li~~~~~~~~~-~~--------------~~~~~--~~~~l---vallV~aiP~aLg~l~~av~ 273 (675)
T TIGR01497 214 PNEIALTILLIALTLVFLLVTATLWPFA-AY--------------GGNAI--SVTVL---VALLVCLIPTTIGGLLSAIG 273 (675)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hh--------------cChhH--HHHHH---HHHHHHhCchhhhhHHHHHH
Confidence 9998888766544333222221111100 01 01111 11111 23677889996532222111
Q ss_pred HHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhh
Q 001304 340 SLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNA 419 (1104)
Q Consensus 340 ~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (1104)
...+. +|.+. ++++|+..++|+||++|+||||||||||+|+|++.+++..+.
T Consensus 274 iag~~------r~ar~----gvLvK~~~avE~lg~v~~I~~DKTGTLT~g~~~v~~~~~~~~------------------ 325 (675)
T TIGR01497 274 IAGMD------RVLGF----NVIATSGRAVEACGDVDTLLLDKTGTITLGNRLASEFIPAQG------------------ 325 (675)
T ss_pred HHHHH------HHHHC----CeEeeCcHHHHHhhCCCEEEECCCCcccCCCeEEEEEEecCC------------------
Confidence 11211 44444 489999999999999999999999999999999998763110
Q ss_pred hccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEec
Q 001304 420 ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLE 499 (1104)
Q Consensus 420 ~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~ 499 (1104)
.+..+++...++|+.. ..+|.+.|++++|++.|.... ...++..+..|
T Consensus 326 -----~~~~~ll~~aa~~~~~-------------s~hP~a~Aiv~~a~~~~~~~~--------------~~~~~~~~~~p 373 (675)
T TIGR01497 326 -----VDEKTLADAAQLASLA-------------DDTPEGKSIVILAKQLGIRED--------------DVQSLHATFVE 373 (675)
T ss_pred -----CcHHHHHHHHHHhcCC-------------CCCcHHHHHHHHHHHcCCCcc--------------ccccccceEEE
Confidence 0123455666666532 357999999999988765321 11224457789
Q ss_pred cCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC--chhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001304 500 FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ--QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (1104)
Q Consensus 500 F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~--~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~ 577 (1104)
|++.+|+|++.+. +| ..+.|||+|.+++.|.... .+.++++.+++++++|+|++++|+
T Consensus 374 f~~~~~~sg~~~~---~g--~~~~kGa~e~i~~~~~~~g~~~~~~~~~~~~~~a~~G~r~l~va~--------------- 433 (675)
T TIGR01497 374 FTAQTRMSGINLD---NG--RMIRKGAVDAIKRHVEANGGHIPTDLDQAVDQVARQGGTPLVVCE--------------- 433 (675)
T ss_pred EcCCCcEEEEEEe---CC--eEEEECCHHHHHHHHHhcCCCCcHHHHHHHHHHHhCCCeEEEEEE---------------
Confidence 9999887776543 23 4689999999999886432 246788889999999999999993
Q ss_pred HHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC
Q 001304 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP 657 (1104)
Q Consensus 578 ~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~ 657 (1104)
|.+++|+++++|++|++++++|++|+++||+++|+|||+..+|..+|+++|+
T Consensus 434 -----------------------~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~~lGI----- 485 (675)
T TIGR01497 434 -----------------------DNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAAEAGV----- 485 (675)
T ss_pred -----------------------CCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCC-----
Confidence 5689999999999999999999999999999999999999999999999998
Q ss_pred CCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHH
Q 001304 658 KGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV 737 (1104)
Q Consensus 658 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV 737 (1104)
..+++|++|++|..+|
T Consensus 486 ----------------------------------------------------------------~~v~a~~~PedK~~~v 501 (675)
T TIGR01497 486 ----------------------------------------------------------------DDFIAEATPEDKIALI 501 (675)
T ss_pred ----------------------------------------------------------------CEEEcCCCHHHHHHHH
Confidence 2357899999999999
Q ss_pred HHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhh
Q 001304 738 ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYK 816 (1104)
Q Consensus 738 ~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k 816 (1104)
+.+|+.|+.|+|+|||.||+|||++|||||+| |+...-++++||++++++++-+.. ++.+||..+.+...+..|++..
T Consensus 502 ~~lq~~g~~VamvGDG~NDapAL~~AdvGiAm-~~gt~~akeaadivLldd~~s~Iv~av~~GR~~~~t~~~~~t~~~~~ 580 (675)
T TIGR01497 502 RQEQAEGKLVAMTGDGTNDAPALAQADVGVAM-NSGTQAAKEAANMVDLDSDPTKLIEVVHIGKQLLITRGALTTFSIAN 580 (675)
T ss_pred HHHHHcCCeEEEECCCcchHHHHHhCCEeEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHheeeecc
Confidence 99999999999999999999999999999999 543333455999999998876555 4689999999888888898887
Q ss_pred hHHHHHHHHHHHhh
Q 001304 817 SLLICFIQIFFSFI 830 (1104)
Q Consensus 817 ~~~~~~~~~~~~~~ 830 (1104)
.+.-+|..+-..|.
T Consensus 581 ~~~~~~~~~~~~~~ 594 (675)
T TIGR01497 581 DVAKYFAIIPAIFA 594 (675)
T ss_pred cHHHHHHHHHHHHH
Confidence 77766654433333
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-69 Score=612.66 Aligned_cols=757 Identities=20% Similarity=0.237 Sum_probs=484.7
Q ss_pred CCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHHhhhh
Q 001304 16 LYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSD 95 (1104)
Q Consensus 16 ~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~ 95 (1104)
+||+|+..-..+++. ..+.|.-..|+..|..+...|++.-. .|+.....|++++.+-+.. .+|..+..+..
T Consensus 175 ~~G~N~fdi~vPtF~----eLFkE~A~aPfFVFQVFcvgLWCLDe----yWYySlFtLfMli~fE~tl-V~Qrm~~lse~ 245 (1160)
T KOG0209|consen 175 KYGKNKFDIVVPTFS----ELFKEHAVAPFFVFQVFCVGLWCLDE----YWYYSLFTLFMLIAFEATL-VKQRMRTLSEF 245 (1160)
T ss_pred HhcCCccccCCccHH----HHHHHhccCceeeHhHHhHHHHHhHH----HHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 599999988887765 56666666666556666666655322 2444556666666554432 23444444444
Q ss_pred Hhhc--ceEEEEEECCeEEEEeccCCccceEEEEec---CCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecccc
Q 001304 96 KKAN--EKEVWVVKQGIKKLIQSQDIRVGNIVWLRE---NDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAA 170 (1104)
Q Consensus 96 ~~~n--~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~---g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~ 170 (1104)
+.+. +..+.|+|+++|+.+..+||.|||+|.+.. ...||||.+|| .|.|.|||++|||||.|..|.+...
T Consensus 246 R~Mg~kpy~I~v~R~kKW~~l~seeLlPgDvVSI~r~~ed~~vPCDllLL-----~GsciVnEaMLtGESvPl~KE~Ie~ 320 (1160)
T KOG0209|consen 246 RTMGNKPYTINVYRNKKWVKLMSEELLPGDVVSIGRGAEDSHVPCDLLLL-----RGSCIVNEAMLTGESVPLMKESIEL 320 (1160)
T ss_pred HhcCCCceEEEEEecCcceeccccccCCCceEEeccCcccCcCCceEEEE-----ecceeechhhhcCCCcccccccccc
Confidence 5554 346889999999999999999999999988 67899999999 7889999999999999999977542
Q ss_pred ccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceec-------------cCceEEEE
Q 001304 171 CMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR-------------NTEWACGV 237 (1104)
Q Consensus 171 ~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~-------------~~~~~~gv 237 (1104)
.. .++.... + ..+...++|.||.+. +| -+.+.
T Consensus 321 ~~---~d~~ld~----------------~---------------~d~k~hVlfGGTkivQht~p~~~slk~pDg-gc~a~ 365 (1160)
T KOG0209|consen 321 RD---SDDILDI----------------D---------------RDDKLHVLFGGTKIVQHTPPKKASLKTPDG-GCVAY 365 (1160)
T ss_pred CC---hhhhccc----------------c---------------cccceEEEEcCceEEEecCCccccccCCCC-CeEEE
Confidence 11 1111100 0 013445777777762 34 38899
Q ss_pred EEEecCccccccccCCC---CCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhh
Q 001304 238 AVYTGNETKLGMTRGIP---EPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV 314 (1104)
Q Consensus 238 Vv~tG~~T~~~~~~~~~---~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (1104)
|++||.||..|+..+.. ..+-|. |..-.++|++ +++++.+...++.|.....+. ...-+.
T Consensus 366 VlrTGFeTSQGkLvRtilf~aervTa-----Nn~Etf~FIL-FLlVFAiaAa~Yvwv~Gskd~--------~RsrYK--- 428 (1160)
T KOG0209|consen 366 VLRTGFETSQGKLVRTILFSAERVTA-----NNRETFIFIL-FLLVFAIAAAGYVWVEGSKDP--------TRSRYK--- 428 (1160)
T ss_pred EEeccccccCCceeeeEEecceeeee-----ccHHHHHHHH-HHHHHHHHhhheEEEecccCc--------chhhhh---
Confidence 99999999999876531 111111 1111222222 222222233344444321110 011122
Q ss_pred hHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEE
Q 001304 315 IPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFR 394 (1104)
Q Consensus 315 ~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~ 394 (1104)
.++.|.+++...||.-||+.++++-...-. .+ .+.++.|..+--+--.|+||+.|||||||||+..|.|+
T Consensus 429 L~LeC~LIlTSVvPpELPmELSmAVNsSL~------AL----ak~~vyCTEPFRIPfAGkvdvCCFDKTGTLT~d~lvv~ 498 (1160)
T KOG0209|consen 429 LFLECTLILTSVVPPELPMELSMAVNSSLI------AL----AKLGVYCTEPFRIPFAGKVDVCCFDKTGTLTEDDLVVE 498 (1160)
T ss_pred eeeeeeEEEeccCCCCCchhhhHHHHHHHH------HH----HHhceeecCccccccCCceeEEEecCCCccccccEEEE
Confidence 235666788899999998777665432211 01 12246677777788999999999999999999999999
Q ss_pred EEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEE
Q 001304 395 RCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLV 474 (1104)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~ 474 (1104)
.+.-.... .... ... ++...+-+.++|.||+....+++ -.|||.|+|.+++. |+.+.
T Consensus 499 Gvag~~~~-----~~~~------~~~---s~~p~~t~~vlAscHsLv~le~~------lVGDPlEKA~l~~v---~W~~~ 555 (1160)
T KOG0209|consen 499 GVAGLSAD-----EGAL------TPA---SKAPNETVLVLASCHSLVLLEDK------LVGDPLEKATLEAV---GWNLE 555 (1160)
T ss_pred ecccccCC-----cccc------cch---hhCCchHHHHHHHHHHHHHhcCc------ccCChHHHHHHHhc---Ccccc
Confidence 87432110 0000 000 11122456889999998765432 36999999999875 33332
Q ss_pred eecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCC---CcEEEEecChHHhhhhhhccCCchhHHHHHHHHHH
Q 001304 475 NKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS---GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYS 551 (1104)
Q Consensus 475 ~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~---~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a 551 (1104)
..+.. ..-.+.....+|.+.+.|+|..|||||++..... -++++.+|||||+|-.++.+ .+.++++...+|+
T Consensus 556 k~~~v---~p~~~~~~~lkI~~ryhFsSaLKRmsvva~~~~~g~s~k~~~aVKGAPEvi~~ml~d--vP~dY~~iYk~yt 630 (1160)
T KOG0209|consen 556 KKNSV---CPREGNGKKLKIIQRYHFSSALKRMSVVASHQGPGSSEKYFVAVKGAPEVIQEMLRD--VPKDYDEIYKRYT 630 (1160)
T ss_pred cCccc---CCCcCCCcccchhhhhhHHHHHHHHHhhhhcccCCCceEEEEEecCCHHHHHHHHHh--CchhHHHHHHHHh
Confidence 22110 0012333467889999999999999999986532 36899999999999999864 4678999999999
Q ss_pred hccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCe
Q 001304 552 QLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGIN 631 (1104)
Q Consensus 552 ~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~ 631 (1104)
++|.|||++|||.+.+--..+ .-+..++.+|+||+|.|++.+..|++++++++|+.|++++++
T Consensus 631 R~GsRVLALg~K~l~~~~~~q-----------------~rd~~Re~vEsdLtFaGFlif~CPlK~Ds~~~I~el~~SSH~ 693 (1160)
T KOG0209|consen 631 RQGSRVLALGYKPLGDMMVSQ-----------------VRDLKREDVESDLTFAGFLIFSCPLKPDSKKTIKELNNSSHR 693 (1160)
T ss_pred hccceEEEEecccccccchhh-----------------hhhhhhhhhhhcceeeeeEEEeCCCCccHHHHHHHHhccCce
Confidence 999999999999987321110 011234789999999999999999999999999999999999
Q ss_pred EEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHH--HHHHHHHH-HHccccCC---CCCceEEEEcchhHHHH
Q 001304 632 FWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEV--CRSLERVL-LTMRITTS---EPKDVAFVVDGWALEIA 705 (1104)
Q Consensus 632 v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~---~~~~~~lvi~g~~l~~~ 705 (1104)
++|+|||++.||.++|+++|+...... ++...+...... +...+... -.+..... --..+.++++|..++++
T Consensus 694 vvMITGDnpLTAchVak~v~iv~k~~~--vl~~~~~~~~~~~~w~s~d~t~~lp~~p~~~~~~l~~~~dlcitG~~l~~l 771 (1160)
T KOG0209|consen 694 VVMITGDNPLTACHVAKEVGIVEKPTL--VLDLPEEGDGNQLEWVSVDGTIVLPLKPGKKKTLLAETHDLCITGSALDHL 771 (1160)
T ss_pred EEEEeCCCccchheehheeeeeccCce--eeccCccCCCceeeEecCCCceeecCCCCccchhhhhhhhhhcchhHHHHH
Confidence 999999999999999999999765321 111111111000 00000000 00000000 12345678999999888
Q ss_pred HHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchH------H---
Q 001304 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL------Q--- 776 (1104)
Q Consensus 706 ~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~------~--- 776 (1104)
.... .. ........||||+.|+||..++..+|+.|+.++|+|||.||+.|||+||||||+-.+..+ .
T Consensus 772 ~~~~--~l--~~l~~hv~VfARvaP~QKE~ii~tlK~~Gy~TLMCGDGTNDVGALK~AhVGVALL~~~~e~~~~~~~~~~ 847 (1160)
T KOG0209|consen 772 QATD--QL--RRLIPHVWVFARVAPKQKEFIITTLKKLGYVTLMCGDGTNDVGALKQAHVGVALLNNPEESKKDKEKRRK 847 (1160)
T ss_pred hhhH--HH--HHhhhheeEEEeeChhhHHHHHHHHHhcCeEEEEecCCCcchhhhhhcccceehhcCChhhhhHHhhhhh
Confidence 7643 11 122455789999999999999999999999999999999999999999999987332210 0
Q ss_pred -------H------------------------------------------------hhhcceecc-----cchhhHHH--
Q 001304 777 -------A------------------------------------------------ARAADYSIG-----KFRFLKRL-- 794 (1104)
Q Consensus 777 -------a------------------------------------------------~~~AD~vl~-----~f~~l~~l-- 794 (1104)
+ .+-.|-.+. ....+..+
T Consensus 848 ~k~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~e~l~~i~kdlee~~~~p~vKLGDASiAAPFTsK~asv~~v~~ 927 (1160)
T KOG0209|consen 848 KKLKLEPAKQTIAANRQNSPRPPVPPAERHNPHAEKTRERLKKILKDLEEDKGDPLVKLGDASIAAPFTSKLASVSSVTH 927 (1160)
T ss_pred hccccCchhhHHHhhhccCCCCCCCCccccChhHHHHHHHHHHHHHHHhhcccCccccccccccccccccccchHHHHHH
Confidence 0 000111111 01111111
Q ss_pred HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhh-ccC
Q 001304 795 ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTV-MQH 873 (1104)
Q Consensus 795 ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~-~~~ 873 (1104)
++..||+..-..- +.||-+.+.-..-.|+....+....=|...|.+.--+++... ++..-+..|-+.+ ..+
T Consensus 928 IIrQGRctLVtTl-----QMfKILALN~LisAYslSvlyldGVKfgD~QaTisGlLla~c---FlfISrskPLetLSkeR 999 (1160)
T KOG0209|consen 928 IIRQGRCTLVTTL-----QMFKILALNCLISAYSLSVLYLDGVKFGDTQATISGLLLAAC---FLFISRSKPLETLSKER 999 (1160)
T ss_pred HHHhcchhHHHHH-----HHHHHHHHHHHHHHHHHHHhhhcCceecchhHhHHHHHHHHH---HhheecCCchhhHhhcC
Confidence 4689999888763 445656655444445443333333336777777655444332 2222333344443 345
Q ss_pred CccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheee
Q 001304 874 PQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA 914 (1104)
Q Consensus 874 p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 914 (1104)
|. -.++|..++...+++-..|-..+++++-.++.
T Consensus 1000 P~-------~nIFN~Y~i~svl~QFaVH~~tLvYi~~~a~~ 1033 (1160)
T KOG0209|consen 1000 PL-------PNIFNVYIILSVLLQFAVHIATLVYITGEAYK 1033 (1160)
T ss_pred CC-------CCcchHHHHHHHHHHHHHHHHHhhhhHHHHHh
Confidence 54 25777777776666666666666665554443
|
|
| >KOG0205 consensus Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-68 Score=586.68 Aligned_cols=599 Identities=18% Similarity=0.222 Sum_probs=431.1
Q ss_pred cccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC--CcchhhHHHHHHHHHHHHHHHHH
Q 001304 11 ETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN--PASTWGPLIFIFAVSATKEAWDD 88 (1104)
Q Consensus 11 ~~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~--~~~~~~~l~~i~~i~~~~~~~~d 88 (1104)
++|+++||.|++.+.|.+.+ +.|+.-|-+|..+..=..|++.....-+... .|..++.++..+++++...++|+
T Consensus 43 ~eRlk~fG~NkleEkken~~----lKFl~Fm~~PlswVMEaAAimA~~Lang~~~~~DW~DF~gI~~LLliNsti~FveE 118 (942)
T KOG0205|consen 43 EERLKIFGPNKLEEKKESKF----LKFLGFMWNPLSWVMEAAAIMAIGLANGGGRPPDWQDFVGICCLLLINSTISFIEE 118 (942)
T ss_pred HHHHHhhCchhhhhhhhhHH----HHHHHHHhchHHHHHHHHHHHHHHHhcCCCCCcchhhhhhhheeeeecceeeeeec
Confidence 46999999999998886544 3344444555544433444444432211111 12334555666678888899999
Q ss_pred HHHhhh---hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEe
Q 001304 89 YNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTR 165 (1104)
Q Consensus 89 ~~~~~~---~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K 165 (1104)
+++-.. .++-...+++|+|||+|.+++++.||||||+.++.||.||||++||+.. .+.||+|+|||||.|++|
T Consensus 119 ~nAGn~aa~L~a~LA~KakVlRDGkw~E~eAs~lVPGDIlsik~GdIiPaDaRLl~gD----~LkiDQSAlTGESLpvtK 194 (942)
T KOG0205|consen 119 NNAGNAAAALMAGLAPKAKVLRDGKWSEQEASILVPGDILSIKLGDIIPADARLLEGD----PLKIDQSALTGESLPVTK 194 (942)
T ss_pred cccchHHHHHHhccCcccEEeecCeeeeeeccccccCceeeeccCCEecCccceecCC----ccccchhhhcCCcccccc
Confidence 987543 4455567899999999999999999999999999999999999999765 399999999999999999
Q ss_pred eccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcc
Q 001304 166 LIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNET 245 (1104)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T 245 (1104)
. .++.+|+||+++.|+ +.+||++||..|
T Consensus 195 h---------------------------------------------------~gd~vfSgSTcKqGE-~eaVViATg~~T 222 (942)
T KOG0205|consen 195 H---------------------------------------------------PGDEVFSGSTCKQGE-IEAVVIATGVHT 222 (942)
T ss_pred C---------------------------------------------------CCCceecccccccce-EEEEEEEeccce
Confidence 3 456799999999996 999999999999
Q ss_pred ccccccC--CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhh
Q 001304 246 KLGMTRG--IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (1104)
Q Consensus 246 ~~~~~~~--~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1104)
..|+-+. .......++++.++-+..++.+...+-.++..++. ||. ....+.... -..++++
T Consensus 223 F~GkAA~LVdst~~~GHFqkVLt~IGn~ci~si~~g~lie~~vm-----------y~~----q~R~~r~~i--~nLlvll 285 (942)
T KOG0205|consen 223 FFGKAAHLVDSTNQVGHFQKVLTGIGNFCICSIALGMLIEITVM-----------YPI----QHRLYRDGI--DNLLVLL 285 (942)
T ss_pred eehhhHHhhcCCCCcccHHHHHHhhhhHHHHHHHHHHHHHHHhh-----------hhh----hhhhhhhhh--hheheee
Confidence 9998765 23566789999999887655443322222211111 111 111122111 1112244
Q ss_pred hccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEE----EEEe
Q 001304 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRR----CCIG 399 (1104)
Q Consensus 324 ~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~----~~~~ 399 (1104)
..-||++||..++....+++- ++.+ +++.++..+++|+|+.+|++|+|||||||.|++++.+ ++..
T Consensus 286 IGgiPiamPtVlsvTMAiGs~------rLaq----qgAItkrmtAIEemAGmdVLCSDKTGTLTlNkLSvdknl~ev~v~ 355 (942)
T KOG0205|consen 286 IGGIPIAMPTVLSVTMAIGSH------RLSQ----QGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFVK 355 (942)
T ss_pred ecccccccceeeeehhhHHHH------HHHh----cccHHHHHHHHHHhhCceEEeecCcCceeecceecCcCcceeeec
Confidence 455899987444433334433 2222 3478999999999999999999999999999999876 2222
Q ss_pred cEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCc
Q 001304 400 GIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNAS 479 (1104)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~ 479 (1104)
|. +++-.-++.|+|. . .+..|..|.|++...++-
T Consensus 356 gv----------------------~~D~~~L~A~rAs----r----------~en~DAID~A~v~~L~dP---------- 389 (942)
T KOG0205|consen 356 GV----------------------DKDDVLLTAARAS----R----------KENQDAIDAAIVGMLADP---------- 389 (942)
T ss_pred CC----------------------ChHHHHHHHHHHh----h----------hcChhhHHHHHHHhhcCH----------
Confidence 21 1222222223322 1 124577889998876531
Q ss_pred EEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC-chhHHHHHHHHHHhccceEE
Q 001304 480 ILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-QTRTFVEAVEQYSQLGLRTL 558 (1104)
Q Consensus 480 ~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~-~~~~~~~~~~~~a~~GlR~l 558 (1104)
.+.+..|+.++.+||++..||....+.++ +|+-+-.+||||+.|++.|+... .+++..+.+++||++|+|.|
T Consensus 390 ------Keara~ikevhF~PFnPV~Krta~ty~d~-dG~~~r~sKGAPeqil~l~~~~~~i~~~vh~~id~~AeRGlRSL 462 (942)
T KOG0205|consen 390 ------KEARAGIKEVHFLPFNPVDKRTALTYIDP-DGNWHRVSKGAPEQILKLCNEDHDIPERVHSIIDKFAERGLRSL 462 (942)
T ss_pred ------HHHhhCceEEeeccCCccccceEEEEECC-CCCEEEecCCChHHHHHHhhccCcchHHHHHHHHHHHHhcchhh
Confidence 12345688999999999999999999997 78999999999999999998654 46789999999999999999
Q ss_pred EEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 559 CLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 559 ~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++|++..++..- +.-....+++|+.-+-||+|.+..++|+....-|..|.|+|||
T Consensus 463 gVArq~v~e~~~-------------------------~~~g~pw~~~gllp~fdpprhdsa~tirral~lGv~Vkmitgd 517 (942)
T KOG0205|consen 463 AVARQEVPEKTK-------------------------ESPGGPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGD 517 (942)
T ss_pred hhhhhccccccc-------------------------cCCCCCcccccccccCCCCccchHHHHHHHHhccceeeeecch
Confidence 999998765420 1223568999999999999999999999999999999999999
Q ss_pred CHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhh
Q 001304 639 KQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718 (1104)
Q Consensus 639 ~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~ 718 (1104)
...-+...++.+|+-.+-.... .+-|...++- +.|.... ..
T Consensus 518 qlaI~keTgrrlgmgtnmypss--~llG~~~~~~------------------------~~~~~v~-------------el 558 (942)
T KOG0205|consen 518 QLAIAKETGRRLGMGTNMYPSS--ALLGLGKDGS------------------------MPGSPVD-------------EL 558 (942)
T ss_pred HHHHHHhhhhhhccccCcCCch--hhccCCCCCC------------------------CCCCcHH-------------HH
Confidence 9999999999988754421100 0000000000 0000000 01
Q ss_pred hccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH-HH
Q 001304 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-IL 796 (1104)
Q Consensus 719 ~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l-ll 796 (1104)
+.++.-|+.+.|++|.++|+.||+.|+.++|+|||+||+|+||.||+||+. . +.++|++ +||+|++.......+ .+
T Consensus 559 ie~adgfAgVfpehKy~iV~~Lq~r~hi~gmtgdgvndapaLKkAdigiav-a-~atdaar~asdiVltepglSviI~av 636 (942)
T KOG0205|consen 559 IEKADGFAGVFPEHKYEIVKILQERKHIVGMTGDGVNDAPALKKADIGIAV-A-DATDAARSASDIVLTEPGLSVIISAV 636 (942)
T ss_pred hhhccCccccCHHHHHHHHHHHhhcCceecccCCCcccchhhcccccceee-c-cchhhhcccccEEEcCCCchhhHHHH
Confidence 224677899999999999999999999999999999999999999999998 3 3455666 889999986654443 35
Q ss_pred hhhhhhhhhhhHHHHhHhh
Q 001304 797 VHGRYSYNRTAFLSQYSFY 815 (1104)
Q Consensus 797 ~~GR~~~~~i~~~i~~~~~ 815 (1104)
..+|.+|+|......|.+.
T Consensus 637 ltSraIfqrmknytiyavs 655 (942)
T KOG0205|consen 637 LTSRAIFQRMKNYTIYAVS 655 (942)
T ss_pred HHHHHHHHHHhhheeeeeh
Confidence 7899999999776655544
|
|
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-64 Score=603.89 Aligned_cols=473 Identities=31% Similarity=0.408 Sum_probs=378.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEE
Q 001304 72 PLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYV 151 (1104)
Q Consensus 72 ~l~~i~~i~~~~~~~~d~~~~~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~V 151 (1104)
+++..++-...+...++..+...++.+++++++|+|+| ++.|++++|+|||+|.+++||.|||||+++ +|.+.|
T Consensus 6 ~l~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v~r~g-~~~V~~~~l~~GDiv~v~~G~~iP~Dg~vl-----~g~~~v 79 (499)
T TIGR01494 6 VLLFALVEVAAKRAAEDAIRSLKDLLVNPETVTVLRNG-WKEIPASDLVPGDIVLVKSGEIVPADGVLL-----SGSCFV 79 (499)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhccCCCCeEEEEECC-eEEEEHHHCCCCCEEEECCCCEeeeeEEEE-----EccEEE
Confidence 33333333344434444444444445889999999999 999999999999999999999999999999 566999
Q ss_pred EeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccC
Q 001304 152 ETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNT 231 (1104)
Q Consensus 152 des~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~ 231 (1104)
|||+|||||.|+.|++ ++.+++|+.+.+|
T Consensus 80 des~LTGEs~pv~k~~---------------------------------------------------g~~v~~gs~~~~G 108 (499)
T TIGR01494 80 DESNLTGESVPVLKTA---------------------------------------------------GDAVFAGTYVFNG 108 (499)
T ss_pred EcccccCCCCCeeecc---------------------------------------------------CCccccCcEEecc
Confidence 9999999999999942 3567899999988
Q ss_pred ceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHH-HHHHHHHHHHHHHHhhccccccccccccceeeccCCCc
Q 001304 232 EWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLT-GAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEF 307 (1104)
Q Consensus 232 ~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (1104)
.....|..+|.+|..+++.. .....++++++..+++. .++.++.++++++.++.+..+.. ...
T Consensus 109 -~~~~~v~~~~~~s~~~~i~~~v~~~~~~k~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~------------~~~ 175 (499)
T TIGR01494 109 -TLIVVVSATGPNTFGGKIAVVVYTGFETKTPLQPKLDRLSDIIFILFVLLIALAVFLFWAIGLW------------DPN 175 (499)
T ss_pred -EEEEEEEEeccccHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc------------ccc
Confidence 68999999999998887543 33444688899999988 55555555555444433211100 000
Q ss_pred chhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCC
Q 001304 308 PWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLT 387 (1104)
Q Consensus 308 ~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT 387 (1104)
+|... +..++.+++.++|++|++++.++...+.. +|++. ++++|+++.+|+||+++++|||||||||
T Consensus 176 ~~~~~---~~~~~~vl~~~~P~aL~~~~~~~~~~~~~------~~~~~----gilvk~~~~lE~l~~v~~i~fDKTGTLT 242 (499)
T TIGR01494 176 SIFKI---FLRALILLVIAIPIALPLAVTIALAVGDA------RLAKK----GIVVRSLNALEELGKVDYICSDKTGTLT 242 (499)
T ss_pred cHHHH---HHHHHHHHHHhcCCcHHHHHHHHHHHHHH------HHHHC----CcEEechhhhhhccCCcEEEeeCCCccc
Confidence 23333 34455688899999999999888887754 55444 5899999999999999999999999999
Q ss_pred CcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHH
Q 001304 388 ENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAA 467 (1104)
Q Consensus 388 ~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~ 467 (1104)
+|+|+|++++..+. ++.++||.|.|++++++
T Consensus 243 ~~~~~v~~~~~~~~-------------------------------------------------~~~s~hp~~~ai~~~~~ 273 (499)
T TIGR01494 243 KNEMSFKKVSVLGG-------------------------------------------------EYLSGHPDERALVKSAK 273 (499)
T ss_pred cCceEEEEEEecCC-------------------------------------------------CcCCCChHHHHHHHHhh
Confidence 99999999865321 02367999999999986
Q ss_pred hcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHHHH
Q 001304 468 QLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAV 547 (1104)
Q Consensus 468 ~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~ 547 (1104)
..+ +...||++.+|+|+++++.. ++ .|+||+++.+.+.|.. +.+.+
T Consensus 274 ~~~------------------------~~~~~f~~~~~~~~~~~~~~-~~---~~~~G~~~~i~~~~~~------~~~~~ 319 (499)
T TIGR01494 274 WKI------------------------LNVFEFSSVRKRMSVIVRGP-DG---TYVKGAPEFVLSRVKD------LEEKV 319 (499)
T ss_pred hcC------------------------cceeccCCCCceEEEEEecC-Cc---EEEeCCHHHHHHhhHH------HHHHH
Confidence 411 24579999999999999863 22 3789999999998742 44566
Q ss_pred HHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHH
Q 001304 548 EQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRK 627 (1104)
Q Consensus 548 ~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~ 627 (1104)
++++.+|+|++++|++ -+++|+++++|++|++++++|+.|++
T Consensus 320 ~~~~~~g~~~~~~a~~--------------------------------------~~~~g~i~l~d~lr~~~~~~i~~l~~ 361 (499)
T TIGR01494 320 KELAQSGLRVLAVASK--------------------------------------ETLLGLLGLEDPLRDDAKETISELRE 361 (499)
T ss_pred HHHHhCCCEEEEEEEC--------------------------------------CeEEEEEEecCCCchhHHHHHHHHHH
Confidence 6788999999999953 26999999999999999999999999
Q ss_pred cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHH
Q 001304 628 AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALK 707 (1104)
Q Consensus 628 aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~ 707 (1104)
+|++++|+|||+..+|..+|+++|+
T Consensus 362 ~gi~~~~ltGD~~~~a~~ia~~lgi------------------------------------------------------- 386 (499)
T TIGR01494 362 AGIRVIMLTGDNVLTAKAIAKELGI------------------------------------------------------- 386 (499)
T ss_pred CCCeEEEEcCCCHHHHHHHHHHcCc-------------------------------------------------------
Confidence 9999999999999999999999985
Q ss_pred HHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 708 HYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 708 ~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
+++++|++|.++|+.+|+.|+.|+|+|||.||+||+++|||||+| + ++.+||+++.+
T Consensus 387 -----------------~~~~~p~~K~~~v~~l~~~g~~v~~vGDg~nD~~al~~Advgia~-~-----a~~~adivl~~ 443 (499)
T TIGR01494 387 -----------------FARVTPEEKAALVEALQKKGRVVAMTGDGVNDAPALKKADVGIAM-G-----AKAAADIVLLD 443 (499)
T ss_pred -----------------eeccCHHHHHHHHHHHHHCCCEEEEECCChhhHHHHHhCCCcccc-c-----hHHhCCeEEec
Confidence 247899999999999999999999999999999999999999999 4 57789999998
Q ss_pred chhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHH
Q 001304 788 FRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIF 826 (1104)
Q Consensus 788 f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~ 826 (1104)
++..... ++.+||+.++++++.+.|.+++|+......++
T Consensus 444 ~~l~~i~~~~~~~r~~~~~i~~~~~~~~~~n~~~~~~a~~ 483 (499)
T TIGR01494 444 DNLSTIVDALKEGRKTFSTIKSNIFWAIAYNLILIPLAAL 483 (499)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6554333 57899999999999999999999886554443
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.5e-60 Score=563.16 Aligned_cols=487 Identities=20% Similarity=0.230 Sum_probs=370.7
Q ss_pred HHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEE-CCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCc
Q 001304 75 FIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQG 147 (1104)
Q Consensus 75 ~i~~i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r-~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G 147 (1104)
+++++-.+-+++|++.+.|+ ..++.++++++++ ||++++|+.++|+|||+|.|+|||+||+||+++ +|
T Consensus 179 ~ii~l~~~G~~LE~~a~~ra~~ai~~L~~l~p~~A~~~~~~~~~~~v~v~~v~~GD~v~VrpGE~IPvDG~V~-----~G 253 (713)
T COG2217 179 MLIFLFLLGRYLEARAKGRARRAIRALLDLAPKTATVVRGDGEEEEVPVEEVQVGDIVLVRPGERIPVDGVVV-----SG 253 (713)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCEEEEEecCCcEEEEEHHHCCCCCEEEECCCCEecCCeEEE-----eC
Confidence 44445556678888877654 3455788998877 455899999999999999999999999999999 78
Q ss_pred cEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecce
Q 001304 148 VCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCY 227 (1104)
Q Consensus 148 ~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~ 227 (1104)
...||||+|||||.|+.| ..++.++.||.
T Consensus 254 ~s~vDeS~iTGEs~PV~k---------------------------------------------------~~Gd~V~aGti 282 (713)
T COG2217 254 SSSVDESMLTGESLPVEK---------------------------------------------------KPGDEVFAGTV 282 (713)
T ss_pred cEEeecchhhCCCCCEec---------------------------------------------------CCCCEEeeeEE
Confidence 899999999999999999 45678999999
Q ss_pred eccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccC
Q 001304 228 LRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYP 304 (1104)
Q Consensus 228 l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 304 (1104)
+.+| .....|+.+|.||.+.++.+ .++.+++++|+..|++..++.+..++++++.+++|+++..
T Consensus 283 N~~G-~l~i~vt~~~~dt~la~Ii~LVe~Aq~~Ka~iqrlaDr~a~~fvp~vl~ia~l~f~~w~~~~~------------ 349 (713)
T COG2217 283 NLDG-SLTIRVTRVGADTTLARIIRLVEEAQSSKAPIQRLADRVASYFVPVVLVIAALTFALWPLFGG------------ 349 (713)
T ss_pred ECCc-cEEEEEEecCccCHHHHHHHHHHHHhhCCchHHHHHHHHHHccHHHHHHHHHHHHHHHHHhcC------------
Confidence 9998 79999999999999998765 6778889999999999999999888777777664322211
Q ss_pred CCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCC
Q 001304 305 QEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTG 384 (1104)
Q Consensus 305 ~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTG 384 (1104)
.+|...+..+++ +++..+|++|.++...+.....- + ..+.++++|+...+|.++++|+++|||||
T Consensus 350 --~~~~~a~~~a~a---vLVIaCPCALgLAtP~ai~~g~g------~----aA~~GILiK~g~~LE~l~~v~tvvFDKTG 414 (713)
T COG2217 350 --GDWETALYRALA---VLVIACPCALGLATPTAILVGIG------R----AARRGILIKGGEALERLAKVDTVVFDKTG 414 (713)
T ss_pred --CcHHHHHHHHHh---heeeeCccHHHhHHHHHHHHHHH------H----HHhCceEEeChHHHHhhccCCEEEEeCCC
Confidence 234444433333 56677777764433333322211 1 12346999999999999999999999999
Q ss_pred CCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHH
Q 001304 385 TLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (1104)
Q Consensus 385 TLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~ 464 (1104)
|||+|++++.++...+. +..+++...+ + + +..++||..+|+++
T Consensus 415 TLT~G~p~v~~v~~~~~------------------------~e~~~L~laA-a--l----------E~~S~HPiA~AIv~ 457 (713)
T COG2217 415 TLTEGKPEVTDVVALDG------------------------DEDELLALAA-A--L----------EQHSEHPLAKAIVK 457 (713)
T ss_pred CCcCCceEEEEEecCCC------------------------CHHHHHHHHH-H--H----------HhcCCChHHHHHHH
Confidence 99999999999864321 0111221111 1 1 12368999999999
Q ss_pred HHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHH
Q 001304 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (1104)
Q Consensus 465 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~ 544 (1104)
+|+..|..-. .. .+.+| .+-....+ +| ..+.-|.+.-+.+.-.+ .....
T Consensus 458 ~a~~~~~~~~---------------~~---~~~i~----G~Gv~~~v----~g--~~v~vG~~~~~~~~~~~---~~~~~ 506 (713)
T COG2217 458 AAAERGLPDV---------------ED---FEEIP----GRGVEAEV----DG--ERVLVGNARLLGEEGID---LPLLS 506 (713)
T ss_pred HHHhcCCCCc---------------cc---eeeec----cCcEEEEE----CC--EEEEEcCHHHHhhcCCC---ccchh
Confidence 9987662110 00 11111 11111111 33 23455777665432111 11155
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHH
Q 001304 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (1104)
Q Consensus 545 ~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~ 624 (1104)
+..+.+..+|..++.++ .|.+++|+++++|++|++++++|++
T Consensus 507 ~~~~~~~~~G~t~v~va--------------------------------------~dg~~~g~i~~~D~~R~~a~~aI~~ 548 (713)
T COG2217 507 ERIEALESEGKTVVFVA--------------------------------------VDGKLVGVIALADELRPDAKEAIAA 548 (713)
T ss_pred hhHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEEeCCCChhHHHHHHH
Confidence 67888899999988888 5679999999999999999999999
Q ss_pred HHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHH
Q 001304 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (1104)
Q Consensus 625 l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 704 (1104)
||+.|+++.|+|||+..+|..+|+++||
T Consensus 549 L~~~Gi~~~mLTGDn~~~A~~iA~~lGI---------------------------------------------------- 576 (713)
T COG2217 549 LKALGIKVVMLTGDNRRTAEAIAKELGI---------------------------------------------------- 576 (713)
T ss_pred HHHCCCeEEEEcCCCHHHHHHHHHHcCh----------------------------------------------------
Confidence 9999999999999999999999999998
Q ss_pred HHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHh-hhcce
Q 001304 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA-RAADY 783 (1104)
Q Consensus 705 ~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~-~~AD~ 783 (1104)
..+.+++.|++|.++|+.+|+.|+.|+|+|||+||+|+|.+||||||| |. |++++ ++||+
T Consensus 577 -----------------d~v~AellPedK~~~V~~l~~~g~~VamVGDGINDAPALA~AdVGiAm-G~-GtDvA~eaADv 637 (713)
T COG2217 577 -----------------DEVRAELLPEDKAEIVRELQAEGRKVAMVGDGINDAPALAAADVGIAM-GS-GTDVAIEAADV 637 (713)
T ss_pred -----------------HhheccCCcHHHHHHHHHHHhcCCEEEEEeCCchhHHHHhhcCeeEee-cC-CcHHHHHhCCE
Confidence 235678999999999999999999999999999999999999999999 66 55555 59999
Q ss_pred ecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHH
Q 001304 784 SIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICF 822 (1104)
Q Consensus 784 vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~ 822 (1104)
+|++++..... .+..+|.++.++++.+.|.|..|+++..
T Consensus 638 vL~~~dL~~v~~ai~lsr~t~~~IkqNl~~A~~yn~~~ip 677 (713)
T COG2217 638 VLMRDDLSAVPEAIDLSRATRRIIKQNLFWAFGYNAIAIP 677 (713)
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987664433 4688999999999999999988876543
|
|
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-59 Score=575.95 Aligned_cols=478 Identities=18% Similarity=0.199 Sum_probs=366.6
Q ss_pred HHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccE
Q 001304 76 IFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVC 149 (1104)
Q Consensus 76 i~~i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~ 149 (1104)
++++..+.+++|++.+.|+ ..++.+.+++|+|||++++|++++|+|||+|+|++||+|||||+|+ +|.+
T Consensus 212 i~~l~~~g~~le~~~~~ra~~~~~~L~~l~p~~a~vir~g~~~~v~~~~l~~GDiv~v~~G~~IP~Dg~vi-----~g~~ 286 (741)
T PRK11033 212 VLLLFLIGERLEGYAASRARRGVSALMALVPETATRLRDGEREEVAIADLRPGDVIEVAAGGRLPADGKLL-----SPFA 286 (741)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEecceEEE-----ECcE
Confidence 3334445566666655543 3455788999999999999999999999999999999999999999 5668
Q ss_pred EEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceec
Q 001304 150 YVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR 229 (1104)
Q Consensus 150 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~ 229 (1104)
.||||+|||||.|+.| ..++.+++||.+.
T Consensus 287 ~vdes~lTGEs~Pv~k---------------------------------------------------~~Gd~V~aGt~~~ 315 (741)
T PRK11033 287 SFDESALTGESIPVER---------------------------------------------------ATGEKVPAGATSV 315 (741)
T ss_pred EeecccccCCCCCEec---------------------------------------------------CCCCeeccCCEEc
Confidence 9999999999999999 3457899999999
Q ss_pred cCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCC
Q 001304 230 NTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE 306 (1104)
Q Consensus 230 ~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 306 (1104)
+| .+.+.|+.+|.+|.++++.+ ..+.+++++++.+++++.++.+++++++++.+++++++. .
T Consensus 316 ~G-~~~i~V~~~g~~s~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~~~~v~~~a~~~~~~~~~~~--------------~ 380 (741)
T PRK11033 316 DR-LVTLEVLSEPGASAIDRILHLIEEAEERRAPIERFIDRFSRIYTPAIMLVALLVILVPPLLF--------------A 380 (741)
T ss_pred Cc-eEEEEEEeccccCHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc--------------c
Confidence 98 69999999999999998764 556678999999999999998888887777766542211 1
Q ss_pred cchhhhhhhHHHHHHhhhccccchh----HHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecC
Q 001304 307 FPWYELLVIPLRFELLCSIMIPISI----KVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDK 382 (1104)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~~iP~~L----~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DK 382 (1104)
.+|...+..++ .+++.++|++| |+.+..+....+ ++++++|+.+.+|.|+++++|||||
T Consensus 381 ~~~~~~i~~a~---svlviacPcaL~latP~a~~~~l~~aa--------------r~gilik~~~alE~l~~v~~v~fDK 443 (741)
T PRK11033 381 APWQEWIYRGL---TLLLIGCPCALVISTPAAITSGLAAAA--------------RRGALIKGGAALEQLGRVTTVAFDK 443 (741)
T ss_pred CCHHHHHHHHH---HHHHHhchhhhhhhhHHHHHHHHHHHH--------------HCCeEEcCcHHHHHhhCCCEEEEeC
Confidence 12333333333 25566778877 333333322221 2369999999999999999999999
Q ss_pred CCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHH
Q 001304 383 TGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEAL 462 (1104)
Q Consensus 383 TGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al 462 (1104)
|||||+|+|+|.++...+. .. ..+++...+. +. ..+.||.+.|+
T Consensus 444 TGTLT~g~~~v~~~~~~~~---------~~--------------~~~~l~~aa~---~e----------~~s~hPia~Ai 487 (741)
T PRK11033 444 TGTLTEGKPQVTDIHPATG---------IS--------------ESELLALAAA---VE----------QGSTHPLAQAI 487 (741)
T ss_pred CCCCcCCceEEEEEEecCC---------CC--------------HHHHHHHHHH---Hh----------cCCCCHHHHHH
Confidence 9999999999998754221 00 1122222221 11 12579999999
Q ss_pred HHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEE-EEEEeCCCCcEEEEecChHHhhhhhhccCCchh
Q 001304 463 VHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS-VVVKDCHSGNISLLSKGADEAILPYAHAGQQTR 541 (1104)
Q Consensus 463 ~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrms-viv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~ 541 (1104)
++++++.+.. +||.++++.+. .-++..-+|+.+ .-|+++.+.+ ..+
T Consensus 488 ~~~a~~~~~~-------------------------~~~~~~~~~~~g~Gv~~~~~g~~~--~ig~~~~~~~------~~~ 534 (741)
T PRK11033 488 VREAQVRGLA-------------------------IPEAESQRALAGSGIEGQVNGERV--LICAPGKLPP------LAD 534 (741)
T ss_pred HHHHHhcCCC-------------------------CCCCcceEEEeeEEEEEEECCEEE--EEecchhhhh------ccH
Confidence 9999876532 35666666653 112211134433 3478877644 124
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHH
Q 001304 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPET 621 (1104)
Q Consensus 542 ~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~ 621 (1104)
++.+.++++..+|+|++++| .|.+++|+++++|++|++++++
T Consensus 535 ~~~~~~~~~~~~g~~~v~va--------------------------------------~~~~~~g~i~l~d~~r~~a~~~ 576 (741)
T PRK11033 535 AFAGQINELESAGKTVVLVL--------------------------------------RNDDVLGLIALQDTLRADARQA 576 (741)
T ss_pred HHHHHHHHHHhCCCEEEEEE--------------------------------------ECCEEEEEEEEecCCchhHHHH
Confidence 45667788999999999999 4678999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchh
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 701 (1104)
|+.|+++|++++|+|||+..+|..+|+++||.
T Consensus 577 i~~L~~~gi~~~llTGd~~~~a~~ia~~lgi~------------------------------------------------ 608 (741)
T PRK11033 577 ISELKALGIKGVMLTGDNPRAAAAIAGELGID------------------------------------------------ 608 (741)
T ss_pred HHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCC------------------------------------------------
Confidence 99999999999999999999999999999982
Q ss_pred HHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhc
Q 001304 702 LEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781 (1104)
Q Consensus 702 l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~A 781 (1104)
.+++++|++|..+|+.+++. +.|+|+|||.||+|||++|||||+| |+....++++|
T Consensus 609 ----------------------~~~~~~p~~K~~~v~~l~~~-~~v~mvGDgiNDapAl~~A~vgia~-g~~~~~a~~~a 664 (741)
T PRK11033 609 ----------------------FRAGLLPEDKVKAVTELNQH-APLAMVGDGINDAPAMKAASIGIAM-GSGTDVALETA 664 (741)
T ss_pred ----------------------eecCCCHHHHHHHHHHHhcC-CCEEEEECCHHhHHHHHhCCeeEEe-cCCCHHHHHhC
Confidence 12457999999999999965 5899999999999999999999999 65555566799
Q ss_pred ceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHH
Q 001304 782 DYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLI 820 (1104)
Q Consensus 782 D~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~ 820 (1104)
|+++.+.++.... ++..||.++.|+++.+.|.+..|+++
T Consensus 665 divl~~~~l~~l~~~i~~sr~~~~~I~~nl~~a~~~n~~~ 704 (741)
T PRK11033 665 DAALTHNRLRGLAQMIELSRATHANIRQNITIALGLKAIF 704 (741)
T ss_pred CEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999876653333 46899999999999999888777653
|
|
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-58 Score=556.68 Aligned_cols=492 Identities=18% Similarity=0.198 Sum_probs=366.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhh---HhhcceEEEEEECC-eEEEEeccCCccceEEEEecCCcccceEEEEeccCCCcc
Q 001304 73 LIFIFAVSATKEAWDDYNRYLSD---KKANEKEVWVVKQG-IKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~~---~~~n~~~~~V~r~g-~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~ 148 (1104)
+++++.++...+.++++|..+.. ...++.+++|+|+| +++++++++|+|||+|.|++||.|||||+|+ +|.
T Consensus 24 i~~~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~~v~r~~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~vi-----~g~ 98 (556)
T TIGR01525 24 LLFLFLLGETLEERAKGRASDALSALLALAPSTARVLQGDGSEEEVPVEELQVGDIVIVRPGERIPVDGVVI-----SGE 98 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEeccceEEE-----ecc
Confidence 33334444444555555444432 34567889999996 9999999999999999999999999999999 567
Q ss_pred EEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeeccee
Q 001304 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (1104)
Q Consensus 149 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l 228 (1104)
+.||||+|||||.|+.| ..++.+++||.+
T Consensus 99 ~~vdes~lTGEs~pv~k---------------------------------------------------~~g~~v~aGt~v 127 (556)
T TIGR01525 99 SEVDESALTGESMPVEK---------------------------------------------------KEGDEVFAGTIN 127 (556)
T ss_pred eEEeehhccCCCCCEec---------------------------------------------------CCcCEEeeceEE
Confidence 99999999999999998 345789999999
Q ss_pred ccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCC
Q 001304 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (1104)
Q Consensus 229 ~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (1104)
.+| .++++|++||.+|.+|++.+ ..+.+++++++.+++++.++.++.++++++.++.++...
T Consensus 128 ~~g-~~~~~v~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~~a~~~~~~~~~~~-------------- 192 (556)
T TIGR01525 128 GDG-SLTIRVTKLGEDSTLAQIVKLVEEAQSSKAPIQRLADRIASYYVPAVLAIALLTFVVWLALG-------------- 192 (556)
T ss_pred CCc-eEEEEEEEecccCHHHHHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--------------
Confidence 998 69999999999999998754 345677999999999998888877777766665432111
Q ss_pred CcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCC
Q 001304 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (1104)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGT 385 (1104)
.. ..+ ..++.++...+|++|++.+.++...... +|.++ ++++|+.+.+|.||+++++|||||||
T Consensus 193 --~~-~~~---~~~~~vlv~~~P~al~l~~~~~~~~~~~------~~~~~----gilvk~~~~le~l~~v~~i~fDKTGT 256 (556)
T TIGR01525 193 --AL-GAL---YRALAVLVVACPCALGLATPVAILVAIG------VAARR----GILIKGGDALEKLAKVKTVVFDKTGT 256 (556)
T ss_pred --cc-hHH---HHHHHHHhhccccchhehhHHHHHHHHH------HHHHC----CceecCchHHHHhhcCCEEEEeCCCC
Confidence 00 222 2233467778899997766666555543 33333 58999999999999999999999999
Q ss_pred CCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHH
Q 001304 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (1104)
Q Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~ 465 (1104)
||+|+|++.++...+... ....+++. +|..+. ....||.+.|++++
T Consensus 257 LT~~~~~v~~~~~~~~~~---------------------~~~~~~l~---~a~~~e----------~~~~hp~~~Ai~~~ 302 (556)
T TIGR01525 257 LTTGKPTVVDVEPLDDAS---------------------ISEEELLA---LAAALE----------QSSSHPLARAIVRY 302 (556)
T ss_pred CcCCceEEEEEEecCCCC---------------------ccHHHHHH---HHHHHh----------ccCCChHHHHHHHH
Confidence 999999999886532110 00112222 222222 12569999999999
Q ss_pred HHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHH
Q 001304 466 AAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545 (1104)
Q Consensus 466 a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~ 545 (1104)
+++.|..... + + -...++ .+.+...++ |. .-+..|+++.+ + . .........+
T Consensus 303 ~~~~~~~~~~--~-------------~-~~~~~~----~~gi~~~~~----g~-~~~~lg~~~~~-~-~-~~~~~~~~~~ 354 (556)
T TIGR01525 303 AKKRGLELPK--Q-------------E-DVEEVP----GKGVEATVD----GQ-EEVRIGNPRLL-E-L-AAEPISASPD 354 (556)
T ss_pred HHhcCCCccc--c-------------c-CeeEec----CCeEEEEEC----Ce-eEEEEecHHHH-h-h-cCCCchhhHH
Confidence 9887653210 0 0 000111 122222221 21 12334665544 1 1 1112233446
Q ss_pred HHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHH
Q 001304 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625 (1104)
Q Consensus 546 ~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l 625 (1104)
.+++++.+|+|++.+| .|.+++|.+.++|+++|+++++|+.|
T Consensus 355 ~~~~~~~~g~~~~~v~--------------------------------------~~~~~~g~i~~~d~~~~g~~e~l~~L 396 (556)
T TIGR01525 355 LLNEGESQGKTVVFVA--------------------------------------VDGELLGVIALRDQLRPEAKEAIAAL 396 (556)
T ss_pred HHHHHhhCCcEEEEEE--------------------------------------ECCEEEEEEEecccchHhHHHHHHHH
Confidence 6778899999999998 46799999999999999999999999
Q ss_pred HHcC-CeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHH
Q 001304 626 RKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (1104)
Q Consensus 626 ~~aG-I~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 704 (1104)
+++| ++++|+|||+..++..+++++|+
T Consensus 397 ~~~g~i~v~ivTgd~~~~a~~i~~~lgi---------------------------------------------------- 424 (556)
T TIGR01525 397 KRAGGIKLVMLTGDNRSAAEAVAAELGI---------------------------------------------------- 424 (556)
T ss_pred HHcCCCeEEEEeCCCHHHHHHHHHHhCC----------------------------------------------------
Confidence 9999 99999999999999999999998
Q ss_pred HHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhccee
Q 001304 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (1104)
Q Consensus 705 ~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~v 784 (1104)
..+++++.|++|..+++.++..++.|+|+|||.||++|++.||+||++ |+....++..||++
T Consensus 425 -----------------~~~f~~~~p~~K~~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~Ad~v 486 (556)
T TIGR01525 425 -----------------DEVHAELLPEDKLAIVKELQEEGGVVAMVGDGINDAPALAAADVGIAM-GAGSDVAIEAADIV 486 (556)
T ss_pred -----------------CeeeccCCHHHHHHHHHHHHHcCCEEEEEECChhHHHHHhhCCEeEEe-CCCCHHHHHhCCEE
Confidence 134567899999999999999889999999999999999999999999 65555566699999
Q ss_pred cccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 785 IGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 785 l~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
+.+.++.... ++..||..+.|+++.+.|.+..|++..
T Consensus 487 i~~~~~~~l~~~i~~~r~~~~~i~~nl~~a~~~N~~~i 524 (556)
T TIGR01525 487 LLNDDLSSLPTAIDLSRKTRRIIKQNLAWALGYNLVAI 524 (556)
T ss_pred EeCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9975554333 368999999999999999999888754
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.8e-57 Score=541.18 Aligned_cols=470 Identities=19% Similarity=0.230 Sum_probs=355.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh---hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccE
Q 001304 73 LIFIFAVSATKEAWDDYNRYLS---DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVC 149 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~---~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~ 149 (1104)
+++++.++...+.++++|..+. ..++++++++|+|||+++++++++|+|||+|.|++||.|||||+++ +|.+
T Consensus 24 i~~~~~~~~~l~~~~~~~a~~~l~~l~~~~~~~~~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iP~Dg~ii-----~g~~ 98 (536)
T TIGR01512 24 LLLLFSIGETLEEYASGRARRALKALMELAPDTARVLRGGSLEEVAVEELKVGDVVVVKPGERVPVDGVVL-----SGTS 98 (536)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCEEEEEEHHHCCCCCEEEEcCCCEeecceEEE-----eCcE
Confidence 4444445555566666555443 3445788999999999999999999999999999999999999999 5679
Q ss_pred EEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceec
Q 001304 150 YVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLR 229 (1104)
Q Consensus 150 ~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~ 229 (1104)
.||||+|||||.|+.|. .++.+|+||.+.
T Consensus 99 ~vdes~lTGEs~pv~k~---------------------------------------------------~g~~v~aGt~v~ 127 (536)
T TIGR01512 99 TVDESALTGESVPVEKA---------------------------------------------------PGDEVFAGAINL 127 (536)
T ss_pred EEEecccCCCCCcEEeC---------------------------------------------------CCCEEEeeeEEC
Confidence 99999999999999983 356899999999
Q ss_pred cCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCC
Q 001304 230 NTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQE 306 (1104)
Q Consensus 230 ~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 306 (1104)
+| .++++|+.||.+|.+|++.+ ..+.+++++++.+++++.++.++.++++++.++.++++.
T Consensus 128 ~G-~~~~~V~~~g~~t~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------- 191 (536)
T TIGR01512 128 DG-VLTIVVTKLPADSTIAKIVNLVEEAQSRKAKTQRFIDRFARYYTPVVLAIALAIWLVPGLLK--------------- 191 (536)
T ss_pred Cc-eEEEEEEEeccccHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------------
Confidence 98 69999999999999998755 345677999999999998888877776665555432110
Q ss_pred cchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCC
Q 001304 307 FPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTL 386 (1104)
Q Consensus 307 ~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTL 386 (1104)
.+...+ ...+.++..++|++|++++.++...... ++.+ +++++|+.+.+|++|+++++||||||||
T Consensus 192 -~~~~~~---~~~~svlv~~~P~aL~la~~~~~~~~~~------~~~k----~gilik~~~~le~l~~v~~i~fDKTGTL 257 (536)
T TIGR01512 192 -RWPFWV---YRALVLLVVASPCALVISAPAAYLSAIS------AAAR----HGILIKGGAALEALAKIKTVAFDKTGTL 257 (536)
T ss_pred -ccHHHH---HHHHHHHhhcCccccccchHHHHHHHHH------HHHH----CCeEEcCcHHHHhhcCCCEEEECCCCCC
Confidence 011122 2233467788999987666555554433 3333 3599999999999999999999999999
Q ss_pred CCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHH
Q 001304 387 TENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAA 466 (1104)
Q Consensus 387 T~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a 466 (1104)
|+|+|++.++... +++...+.+. ....||.+.|+++++
T Consensus 258 T~~~~~v~~~~~~-----------------------------~~l~~a~~~e-------------~~~~hp~~~Ai~~~~ 295 (536)
T TIGR01512 258 TTGRPKVVDVVPA-----------------------------EVLRLAAAAE-------------QASSHPLARAIVDYA 295 (536)
T ss_pred cCCceEEEEeeHH-----------------------------HHHHHHHHHh-------------ccCCCcHHHHHHHHH
Confidence 9999999886410 2222222111 125799999999999
Q ss_pred HhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHHH
Q 001304 467 AQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEA 546 (1104)
Q Consensus 467 ~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~ 546 (1104)
++.+ .+ +-...+| .+.+...+ +|+.+ ..|+++.+.+..
T Consensus 296 ~~~~-~~-------------------~~~~~~~----g~gi~~~~----~g~~~--~ig~~~~~~~~~------------ 333 (536)
T TIGR01512 296 RKRE-NV-------------------ESVEEVP----GEGVRAVV----DGGEV--RIGNPRSLEAAV------------ 333 (536)
T ss_pred HhcC-CC-------------------cceEEec----CCeEEEEE----CCeEE--EEcCHHHHhhcC------------
Confidence 7654 00 0001111 12222222 23322 347765442210
Q ss_pred HHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHH
Q 001304 547 VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLR 626 (1104)
Q Consensus 547 ~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~ 626 (1104)
...+..+|.+++.++ .|..++|.+.++|+++++++++|+.|+
T Consensus 334 ~~~~~~~~~~~~~v~--------------------------------------~~~~~~g~i~~~d~l~~~~~e~i~~L~ 375 (536)
T TIGR01512 334 GARPESAGKTIVHVA--------------------------------------RDGTYLGYILLSDEPRPDAAEAIAELK 375 (536)
T ss_pred CcchhhCCCeEEEEE--------------------------------------ECCEEEEEEEEeccchHHHHHHHHHHH
Confidence 115567788887776 578999999999999999999999999
Q ss_pred HcCC-eEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHH
Q 001304 627 KAGI-NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIA 705 (1104)
Q Consensus 627 ~aGI-~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~ 705 (1104)
++|+ +++|+|||+..++..+++++|+.
T Consensus 376 ~~Gi~~v~vvTgd~~~~a~~i~~~lgi~---------------------------------------------------- 403 (536)
T TIGR01512 376 ALGIEKVVMLTGDRRAVAERVARELGID---------------------------------------------------- 403 (536)
T ss_pred HcCCCcEEEEcCCCHHHHHHHHHHcCCh----------------------------------------------------
Confidence 9999 99999999999999999999982
Q ss_pred HHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecC-CchHHHhhhccee
Q 001304 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAARAADYS 784 (1104)
Q Consensus 706 ~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g-~~~~~a~~~AD~v 784 (1104)
.+++++.|++|..+++.++..++.|+|+|||.||++|++.||+||++ | .....++..||++
T Consensus 404 -----------------~~f~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~A~vgia~-g~~~~~~~~~~ad~v 465 (536)
T TIGR01512 404 -----------------EVHAELLPEDKLEIVKELREKYGPVAMVGDGINDAPALAAADVGIAM-GASGSDVAIETADVV 465 (536)
T ss_pred -----------------hhhhccCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHhCCEEEEe-CCCccHHHHHhCCEE
Confidence 23457789999999999999999999999999999999999999999 6 4444556699999
Q ss_pred cccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 785 IGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 785 l~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
+.+.++ +.. ++..||.++.++++.+.|.+..|++..
T Consensus 466 l~~~~l~~l~~-~i~~~r~~~~~i~~nl~~a~~~n~~~i 503 (536)
T TIGR01512 466 LLNDDLSRLPQ-AIRLARRTRRIVKQNVVIALGIILLLI 503 (536)
T ss_pred EECCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 965443 444 368999999999999999888886643
|
. |
| >KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-56 Score=516.97 Aligned_cols=494 Identities=19% Similarity=0.216 Sum_probs=375.0
Q ss_pred HHHHHHHHHHHhhh------hHhhcceEEEEEECCe-EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEe
Q 001304 81 ATKEAWDDYNRYLS------DKKANEKEVWVVKQGI-KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVET 153 (1104)
Q Consensus 81 ~~~~~~~d~~~~~~------~~~~n~~~~~V~r~g~-~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vde 153 (1104)
.+..++|...++|+ +..+.+.++.++.+|+ .++|+.+.|++||+|.|.||++||+||+++ +|.++|||
T Consensus 352 ~lgr~LE~~Ak~kts~alskLmsl~p~~a~ii~~g~~e~eI~v~lvq~gdivkV~pG~kiPvDG~Vv-----~Gss~VDE 426 (951)
T KOG0207|consen 352 TLGRWLESLAKGKTSEALSKLMSLAPSKATIIEDGSEEKEIPVDLVQVGDIVKVKPGEKIPVDGVVV-----DGSSEVDE 426 (951)
T ss_pred HHHHHHHHHhhccchHHHHHHhhcCcccceEeecCCcceEeeeeeeccCCEEEECCCCccccccEEE-----eCceeech
Confidence 34456666666653 3455788999999997 899999999999999999999999999999 78899999
Q ss_pred ccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCce
Q 001304 154 AALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEW 233 (1104)
Q Consensus 154 s~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~ 233 (1104)
|.+|||+.|+.|+ .+..+..||.+.|| .
T Consensus 427 s~iTGEs~PV~Kk---------------------------------------------------~gs~ViaGsiN~nG-~ 454 (951)
T KOG0207|consen 427 SLITGESMPVPKK---------------------------------------------------KGSTVIAGSINLNG-T 454 (951)
T ss_pred hhccCCceecccC---------------------------------------------------CCCeeeeeeecCCc-e
Confidence 9999999999994 45689999999998 7
Q ss_pred EEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchh
Q 001304 234 ACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWY 310 (1104)
Q Consensus 234 ~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (1104)
.+..++.+|.||.++++.+ .++..++|+|+.+|+++.++.++.+++.++++++|.+...... +| ...|.
T Consensus 455 l~VkaT~~g~dttla~IvkLVEEAQ~sKapiQq~aDkia~yFvP~Vi~lS~~t~~~w~~~g~~~~---~~-----~~~~~ 526 (951)
T KOG0207|consen 455 LLVKATKVGGDTTLAQIVKLVEEAQLSKAPIQQLADKIAGYFVPVVIVLSLATFVVWILIGKIVF---KY-----PRSFF 526 (951)
T ss_pred EEEEEEeccccchHHHHHHHHHHHHcccchHHHHHHHhhhcCCchhhHHHHHHHHHHHHHccccc---cC-----cchhh
Confidence 9999999999999998765 5677889999999999999999988888877776544332111 11 11222
Q ss_pred hhhhhHHHHHH-hhhccccchhHHHH----HHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCC
Q 001304 311 ELLVIPLRFEL-LCSIMIPISIKVSL----DLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (1104)
Q Consensus 311 ~~~~~~~~~~~-l~~~~iP~~L~v~l----~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGT 385 (1104)
..+..++.+.+ +++.++|++|.... -.+.+..+ .+++++|....+|.+.+++++.||||||
T Consensus 527 ~~~~~a~~~aisVlviACPCaLgLATPtAvmvatgvgA--------------~nGvLIKGge~LE~~hkv~tVvFDKTGT 592 (951)
T KOG0207|consen 527 DAFSHAFQLAISVLVIACPCALGLATPTAVMVATGVGA--------------TNGVLIKGGEALEKAHKVKTVVFDKTGT 592 (951)
T ss_pred HHHHHHHHhhheEEEEECchhhhcCCceEEEEEechhh--------------hcceEEcCcHHHHHHhcCCEEEEcCCCc
Confidence 33333333322 56677888774332 22222332 2468999999999999999999999999
Q ss_pred CCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHH
Q 001304 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHA 465 (1104)
Q Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~ 465 (1104)
||+|++++.++..-+.. -...+++...+ +.. -.++||...|++++
T Consensus 593 LT~G~~~V~~~~~~~~~----------------------~~~~e~l~~v~---a~E----------s~SeHPig~AIv~y 637 (951)
T KOG0207|consen 593 LTEGKPTVVDFKSLSNP----------------------ISLKEALALVA---AME----------SGSEHPIGKAIVDY 637 (951)
T ss_pred eecceEEEEEEEecCCc----------------------ccHHHHHHHHH---HHh----------cCCcCchHHHHHHH
Confidence 99999999998654321 01222222221 111 23679999999999
Q ss_pred HHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHH
Q 001304 466 AAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545 (1104)
Q Consensus 466 a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~ 545 (1104)
|+..+... +. -.++..-.|..+.+...+.+. ++- .+-|.-+.+...-. ...+++++
T Consensus 638 ak~~~~~~-----~~-----------~~~~~~~~~pg~g~~~~~~~~----~~~--i~iGN~~~~~r~~~--~~~~~i~~ 693 (951)
T KOG0207|consen 638 AKEKLVEP-----NP-----------EGVLSFEYFPGEGIYVTVTVD----GNE--VLIGNKEWMSRNGC--SIPDDILD 693 (951)
T ss_pred HHhccccc-----Cc-----------cccceeecccCCCcccceEEe----eeE--EeechHHHHHhcCC--CCchhHHH
Confidence 99876111 00 011122223333322222222 222 44466555543221 22456888
Q ss_pred HHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHH
Q 001304 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625 (1104)
Q Consensus 546 ~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l 625 (1104)
.+++-...|..+.++| -|.++.|+++++|++|+|+..+|+.|
T Consensus 694 ~~~~~e~~g~tvv~v~--------------------------------------vn~~l~gv~~l~D~vr~~a~~av~~L 735 (951)
T KOG0207|consen 694 ALTESERKGQTVVYVA--------------------------------------VNGQLVGVFALEDQVRPDAALAVAEL 735 (951)
T ss_pred hhhhHhhcCceEEEEE--------------------------------------ECCEEEEEEEeccccchhHHHHHHHH
Confidence 8999999999999999 58899999999999999999999999
Q ss_pred HHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHH
Q 001304 626 RKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIA 705 (1104)
Q Consensus 626 ~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~ 705 (1104)
|+.||++.|+|||+..+|.++|+++|+
T Consensus 736 k~~Gi~v~mLTGDn~~aA~svA~~VGi----------------------------------------------------- 762 (951)
T KOG0207|consen 736 KSMGIKVVMLTGDNDAAARSVAQQVGI----------------------------------------------------- 762 (951)
T ss_pred HhcCceEEEEcCCCHHHHHHHHHhhCc-----------------------------------------------------
Confidence 999999999999999999999999996
Q ss_pred HHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceec
Q 001304 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (1104)
Q Consensus 706 ~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl 785 (1104)
..|+|++.|+||.++|+.+|+.+..|+|+|||.||+|+|.+|||||+| |....-|.++||+++
T Consensus 763 ----------------~~V~aev~P~~K~~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIai-g~gs~vAieaADIVL 825 (951)
T KOG0207|consen 763 ----------------DNVYAEVLPEQKAEKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAI-GAGSDVAIEAADIVL 825 (951)
T ss_pred ----------------ceEEeccCchhhHHHHHHHHhcCCcEEEEeCCCCccHHHHhhccceee-ccccHHHHhhCCEEE
Confidence 468899999999999999999999999999999999999999999999 554444667999999
Q ss_pred ccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHH
Q 001304 786 GKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLI 820 (1104)
Q Consensus 786 ~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~ 820 (1104)
++.+....+ .+..+|++..|++..+.|.+.+|++-
T Consensus 826 mrn~L~~v~~ai~LSrkt~~rIk~N~~~A~~yn~~~ 861 (951)
T KOG0207|consen 826 MRNDLRDVPFAIDLSRKTVKRIKLNFVWALIYNLVG 861 (951)
T ss_pred EccchhhhHHHHHHHHHHHhhHHHHHHHHHHHHHhh
Confidence 987665544 36789999999999888888887763
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-55 Score=529.96 Aligned_cols=469 Identities=19% Similarity=0.223 Sum_probs=352.2
Q ss_pred HHHHHHHHHHHHHhhh------hHhhcceEEEEEEC-CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEE
Q 001304 79 VSATKEAWDDYNRYLS------DKKANEKEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYV 151 (1104)
Q Consensus 79 i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r~-g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~V 151 (1104)
+..+-+++|++.++|+ ..++.+.+++++|+ |.+++|+.++|+|||+|+|++||.|||||+++ +|.+.|
T Consensus 63 ~~~~g~~le~~~~~~a~~~~~~L~~~~p~~a~~~~~~~~~~~v~~~~l~~GDii~v~~Ge~iP~Dg~v~-----~g~~~v 137 (562)
T TIGR01511 63 FILLGRWLEMLAKGRASDALSKLAKLQPSTATLLTKDGSIEEVPVALLQPGDIVKVLPGEKIPVDGTVI-----EGESEV 137 (562)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEECCCeEEEEEHHHCCCCCEEEECCCCEecCceEEE-----ECceEE
Confidence 3344456666654443 34556789999985 66799999999999999999999999999999 677999
Q ss_pred EeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccC
Q 001304 152 ETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNT 231 (1104)
Q Consensus 152 des~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~ 231 (1104)
|||+|||||.|+.|+ .++.+|+||.+.+|
T Consensus 138 des~lTGEs~pv~k~---------------------------------------------------~gd~V~aGt~~~~g 166 (562)
T TIGR01511 138 DESLVTGESLPVPKK---------------------------------------------------VGDPVIAGTVNGTG 166 (562)
T ss_pred ehHhhcCCCCcEEcC---------------------------------------------------CCCEEEeeeEECCc
Confidence 999999999999983 45689999999998
Q ss_pred ceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcc
Q 001304 232 EWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFP 308 (1104)
Q Consensus 232 ~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (1104)
.+++.|+.||.+|.++++.+ ..+.+++++++.+++++.++.+++++++++.++.+
T Consensus 167 -~~~~~v~~~g~~t~~~~i~~~v~~a~~~k~~~~~~~d~~a~~~~~~v~~~a~~~~~~~--------------------- 224 (562)
T TIGR01511 167 -SLVVRATATGEDTTLAQIVRLVRQAQQSKAPIQRLADKVAGYFVPVVIAIALITFVIW--------------------- 224 (562)
T ss_pred -eEEEEEEEecCCChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 79999999999999998765 44556799999999999988887776666555432
Q ss_pred hhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCC
Q 001304 309 WYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTE 388 (1104)
Q Consensus 309 ~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~ 388 (1104)
...+ ...+.+++..+|++|++...++...... ++.+ .++++|+.+.+|.|+++++||||||||||+
T Consensus 225 -~~~~---~~~~svlvvacPcaL~la~p~a~~~~~~------~aa~----~gIlik~~~~lE~l~~v~~i~fDKTGTLT~ 290 (562)
T TIGR01511 225 -LFAL---EFAVTVLIIACPCALGLATPTVIAVATG------LAAK----NGVLIKDGDALERAANIDTVVFDKTGTLTQ 290 (562)
T ss_pred -HHHH---HHHHHHHHHhccchhhhHHHHHHHHHHH------HHHH----CCeEEcChHHHHHhhCCCEEEECCCCCCcC
Confidence 1112 2223366777888886655555444332 2222 359999999999999999999999999999
Q ss_pred cceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHh
Q 001304 389 NRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQ 468 (1104)
Q Consensus 389 n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~ 468 (1104)
|+|++.++...+.. + ..+++.. |..+. ..+.||.+.|+++++++
T Consensus 291 g~~~v~~i~~~~~~---------------------~--~~~~l~~---aa~~e----------~~s~HPia~Ai~~~~~~ 334 (562)
T TIGR01511 291 GKPTVTDVHVFGDR---------------------D--RTELLAL---AAALE----------AGSEHPLAKAIVSYAKE 334 (562)
T ss_pred CCEEEEEEecCCCC---------------------C--HHHHHHH---HHHHh----------ccCCChHHHHHHHHHHh
Confidence 99999987532110 0 0122222 22111 12569999999999987
Q ss_pred cCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHHHHHH
Q 001304 469 LHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVE 548 (1104)
Q Consensus 469 ~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~ 548 (1104)
.+..... ...+ +.+ ..+.+...+ +|+ -+..|+++.+.+.- .. +.
T Consensus 335 ~~~~~~~-------------~~~~---~~~----~g~Gi~~~~----~g~--~~~iG~~~~~~~~~---~~-------~~ 378 (562)
T TIGR01511 335 KGITLVE-------------VSDF---KAI----PGIGVEGTV----EGT--KIQLGNEKLLGENA---IK-------ID 378 (562)
T ss_pred cCCCcCC-------------CCCe---EEE----CCceEEEEE----CCE--EEEEECHHHHHhCC---CC-------CC
Confidence 7643210 0001 111 123333333 232 24568877653311 00 11
Q ss_pred HHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHc
Q 001304 549 QYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKA 628 (1104)
Q Consensus 549 ~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~a 628 (1104)
++.++|.+++.++ .|.+++|.++++|+++++++++|+.|++.
T Consensus 379 ~~~~~g~~~~~~~--------------------------------------~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~ 420 (562)
T TIGR01511 379 GKAEQGSTSVLVA--------------------------------------VNGELAGVFALEDQLRPEAKEVIQALKRR 420 (562)
T ss_pred hhhhCCCEEEEEE--------------------------------------ECCEEEEEEEecccccHHHHHHHHHHHHc
Confidence 2457899998887 68899999999999999999999999999
Q ss_pred CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHH
Q 001304 629 GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKH 708 (1104)
Q Consensus 629 GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~ 708 (1104)
|++++|+|||+..++..+++++|+.
T Consensus 421 Gi~v~ilSgd~~~~a~~ia~~lgi~------------------------------------------------------- 445 (562)
T TIGR01511 421 GIEPVMLTGDNRKTAKAVAKELGIN------------------------------------------------------- 445 (562)
T ss_pred CCeEEEEcCCCHHHHHHHHHHcCCc-------------------------------------------------------
Confidence 9999999999999999999999981
Q ss_pred HHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 709 YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 709 ~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
+++++.|++|.++++.+++.++.|+|+|||.||++|++.||+||+| |.....++..||+++.+.
T Consensus 446 ---------------~~~~~~p~~K~~~v~~l~~~~~~v~~VGDg~nD~~al~~A~vgia~-g~g~~~a~~~Advvl~~~ 509 (562)
T TIGR01511 446 ---------------VRAEVLPDDKAALIKELQEKGRVVAMVGDGINDAPALAQADVGIAI-GAGTDVAIEAADVVLMRN 509 (562)
T ss_pred ---------------EEccCChHHHHHHHHHHHHcCCEEEEEeCCCccHHHHhhCCEEEEe-CCcCHHHHhhCCEEEeCC
Confidence 3456789999999999999999999999999999999999999999 654444556899999854
Q ss_pred hh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 789 RF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 789 ~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
+. +.. ++..||..++++++.+.|.+..|++..
T Consensus 510 ~l~~l~~-~i~lsr~~~~~i~qn~~~a~~~n~~~i 543 (562)
T TIGR01511 510 DLNDVAT-AIDLSRKTLRRIKQNLLWAFGYNVIAI 543 (562)
T ss_pred CHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 43 333 368999999999999999888887643
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-54 Score=545.34 Aligned_cols=488 Identities=19% Similarity=0.206 Sum_probs=368.9
Q ss_pred HHHHHHHHHHHHHHHHHhhhh------HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCcc
Q 001304 75 FIFAVSATKEAWDDYNRYLSD------KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (1104)
Q Consensus 75 ~i~~i~~~~~~~~d~~~~~~~------~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~ 148 (1104)
+++++..+-+++|++-+.|+. .++.+++++|+|+|++++|+.++|+|||+|.|++||+|||||+++ +|.
T Consensus 291 ~i~~~~~~g~~le~~~~~~~~~~~~~L~~l~p~~a~~~~~~~~~~v~~~~l~~GD~v~v~~G~~iP~Dg~v~-----~g~ 365 (834)
T PRK10671 291 MIIGLINLGHMLEARARQRSSKALEKLLDLTPPTARVVTDEGEKSVPLADVQPGMLLRLTTGDRVPVDGEIT-----QGE 365 (834)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeCCcEEEEEHHHcCCCCEEEEcCCCEeeeeEEEE-----Ece
Confidence 333444555677777665543 345688999999999999999999999999999999999999999 677
Q ss_pred EEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeeccee
Q 001304 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (1104)
Q Consensus 149 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l 228 (1104)
+.||||+|||||.|+.| ..++.+++||.+
T Consensus 366 ~~vdeS~lTGEs~pv~k---------------------------------------------------~~gd~V~aGt~~ 394 (834)
T PRK10671 366 AWLDEAMLTGEPIPQQK---------------------------------------------------GEGDSVHAGTVV 394 (834)
T ss_pred EEEeehhhcCCCCCEec---------------------------------------------------CCCCEEEeccee
Confidence 99999999999999999 345689999999
Q ss_pred ccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCC
Q 001304 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (1104)
Q Consensus 229 ~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (1104)
.+| .+.+.|+.+|.+|.++++.+ ..+..++++++..++++.++.+++++++++.++++++. . .
T Consensus 395 ~~G-~~~~~v~~~g~~t~l~~i~~lv~~a~~~k~~~~~~~d~~a~~~v~~v~~~a~~~~~~~~~~-~------------~ 460 (834)
T PRK10671 395 QDG-SVLFRASAVGSHTTLSRIIRMVRQAQSSKPEIGQLADKISAVFVPVVVVIALVSAAIWYFF-G------------P 460 (834)
T ss_pred cce-eEEEEEEEEcCcChHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-C------------C
Confidence 998 79999999999999998754 34556789999999999988888777776655543211 0 0
Q ss_pred CcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCC
Q 001304 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGT 385 (1104)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGT 385 (1104)
...|...+..+ +.+++.++|++|+.+..++...... ++. +.++++|+.+.+|+||+++++|||||||
T Consensus 461 ~~~~~~~~~~a---~~vlv~acPcaL~la~p~a~~~~~~------~~a----~~gilvk~~~~le~l~~v~~v~fDKTGT 527 (834)
T PRK10671 461 APQIVYTLVIA---TTVLIIACPCALGLATPMSIISGVG------RAA----EFGVLVRDADALQRASTLDTLVFDKTGT 527 (834)
T ss_pred chHHHHHHHHH---HHHHHHhcccchhhhHHHHHHHHHH------HHH----HCCeEEecHHHHHhhcCCCEEEEcCCCc
Confidence 00122222222 3366778899887665555544433 233 2359999999999999999999999999
Q ss_pred CCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHH-HHhhhcccccccCCCCceeeecCCccHHHHHH
Q 001304 386 LTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLT-VMAVCNTVIPAKSKAGAILYKAQSQDEEALVH 464 (1104)
Q Consensus 386 LT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~ 464 (1104)
||+|+|++.++...+. .. ..+++. +.+++. .+.||.+.|+++
T Consensus 528 LT~g~~~v~~~~~~~~---------~~--------------~~~~l~~a~~~e~--------------~s~hp~a~Ai~~ 570 (834)
T PRK10671 528 LTEGKPQVVAVKTFNG---------VD--------------EAQALRLAAALEQ--------------GSSHPLARAILD 570 (834)
T ss_pred cccCceEEEEEEccCC---------CC--------------HHHHHHHHHHHhC--------------CCCCHHHHHHHH
Confidence 9999999988653210 00 011222 222221 257999999999
Q ss_pred HHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHHH
Q 001304 465 AAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFV 544 (1104)
Q Consensus 465 ~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~~ 544 (1104)
++...+.. ....++.+ | .+.+...+ +|+. +.+|+++.+.... ...+.+.
T Consensus 571 ~~~~~~~~---------------~~~~~~~~---~----g~Gv~~~~----~g~~--~~~G~~~~~~~~~---~~~~~~~ 619 (834)
T PRK10671 571 KAGDMTLP---------------QVNGFRTL---R----GLGVSGEA----EGHA--LLLGNQALLNEQQ---VDTKALE 619 (834)
T ss_pred HHhhCCCC---------------CcccceEe---c----ceEEEEEE----CCEE--EEEeCHHHHHHcC---CChHHHH
Confidence 88643210 00111111 0 11122221 3433 4569988764321 1234566
Q ss_pred HHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHH
Q 001304 545 EAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIET 624 (1104)
Q Consensus 545 ~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~ 624 (1104)
+.+++++.+|.+++.+| .|..++|+++++|++|++++++|+.
T Consensus 620 ~~~~~~~~~g~~~v~va--------------------------------------~~~~~~g~~~l~d~~r~~a~~~i~~ 661 (834)
T PRK10671 620 AEITAQASQGATPVLLA--------------------------------------VDGKAAALLAIRDPLRSDSVAALQR 661 (834)
T ss_pred HHHHHHHhCCCeEEEEE--------------------------------------ECCEEEEEEEccCcchhhHHHHHHH
Confidence 77888899999999999 4567999999999999999999999
Q ss_pred HHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHH
Q 001304 625 LRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEI 704 (1104)
Q Consensus 625 l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~ 704 (1104)
|++.|++++|+|||+..+|..+++++|+.
T Consensus 662 L~~~gi~v~~~Tgd~~~~a~~ia~~lgi~--------------------------------------------------- 690 (834)
T PRK10671 662 LHKAGYRLVMLTGDNPTTANAIAKEAGID--------------------------------------------------- 690 (834)
T ss_pred HHHCCCeEEEEcCCCHHHHHHHHHHcCCC---------------------------------------------------
Confidence 99999999999999999999999999981
Q ss_pred HHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhccee
Q 001304 705 ALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYS 784 (1104)
Q Consensus 705 ~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~v 784 (1104)
.+++++.|++|.++++.++..++.|+|+|||.||++|++.||+||+| |+....++++||++
T Consensus 691 ------------------~~~~~~~p~~K~~~i~~l~~~~~~v~~vGDg~nD~~al~~Agvgia~-g~g~~~a~~~ad~v 751 (834)
T PRK10671 691 ------------------EVIAGVLPDGKAEAIKRLQSQGRQVAMVGDGINDAPALAQADVGIAM-GGGSDVAIETAAIT 751 (834)
T ss_pred ------------------EEEeCCCHHHHHHHHHHHhhcCCEEEEEeCCHHHHHHHHhCCeeEEe-cCCCHHHHHhCCEE
Confidence 35567899999999999999999999999999999999999999999 77666677799999
Q ss_pred cccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 785 IGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 785 l~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
+.+.++-... ++..||..+.++++.+.+.+..|++..
T Consensus 752 l~~~~~~~i~~~i~l~r~~~~~i~~Nl~~a~~yn~~~i 789 (834)
T PRK10671 752 LMRHSLMGVADALAISRATLRNMKQNLLGAFIYNSLGI 789 (834)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9876654333 368999999999999999998887654
|
|
| >COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-47 Score=415.40 Aligned_cols=458 Identities=22% Similarity=0.262 Sum_probs=329.8
Q ss_pred eEEEEEEC-CeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhh
Q 001304 101 KEVWVVKQ-GIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179 (1104)
Q Consensus 101 ~~~~V~r~-g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~ 179 (1104)
..++++++ |.++.+++.+|+.||+|+++.||.||+||-++ +|..+||||++||||.|+.|++.-
T Consensus 104 ~~A~~l~~~g~~~~v~st~Lk~gdiV~V~age~IP~DGeVI-----eG~asVdESAITGESaPViresGg---------- 168 (681)
T COG2216 104 TIARLLRADGSIEMVPATELKKGDIVLVEAGEIIPSDGEVI-----EGVASVDESAITGESAPVIRESGG---------- 168 (681)
T ss_pred HHHHHhcCCCCeeeccccccccCCEEEEecCCCccCCCeEE-----eeeeecchhhccCCCcceeeccCC----------
Confidence 35666766 89999999999999999999999999999999 788999999999999999996531
Q ss_pred ccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcccccccc---CCCCC
Q 001304 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR---GIPEP 256 (1104)
Q Consensus 180 ~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~ 256 (1104)
+. ..+--||.+.+. |....++..--+|.+-++. ..++.
T Consensus 169 -------------------------------------D~-ssVtGgT~v~SD-~l~irita~pG~sFlDrMI~LVEgA~R 209 (681)
T COG2216 169 -------------------------------------DF-SSVTGGTRVLSD-WLKIRITANPGETFLDRMIALVEGAER 209 (681)
T ss_pred -------------------------------------Cc-ccccCCcEEeee-eEEEEEEcCCCccHHHHHHHHhhchhc
Confidence 11 225567888775 9999999988889887653 35566
Q ss_pred CcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhccccchhHHHHH
Q 001304 257 KLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLD 336 (1104)
Q Consensus 257 k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~ 336 (1104)
+++|=|-.++-+...+.++.++ .+..+..+ . -|. ..... .. ...+.+++.+||...---++
T Consensus 210 ~KTPNEIAL~iLL~~LTliFL~--~~~Tl~p~--a-------~y~---~g~~~-~i----~~LiALlV~LIPTTIGgLLs 270 (681)
T COG2216 210 QKTPNEIALTILLSGLTLIFLL--AVATLYPF--A-------IYS---GGGAA-SV----TVLVALLVCLIPTTIGGLLS 270 (681)
T ss_pred cCChhHHHHHHHHHHHHHHHHH--HHHhhhhH--H-------HHc---CCCCc-CH----HHHHHHHHHHhcccHHHHHH
Confidence 6788777666544333222111 11111100 0 010 00011 11 11123677888885422222
Q ss_pred HHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhh
Q 001304 337 LVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGL 416 (1104)
Q Consensus 337 l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~ 416 (1104)
..-..++- ++ ...++..++..++|..|.||++..|||||+|-|+=.-.++...+
T Consensus 271 AIGIAGMd------Rv----~~~NViA~SGRAVEaaGDvdtliLDKTGTIT~GnR~A~~f~p~~---------------- 324 (681)
T COG2216 271 AIGIAGMD------RV----TQFNVIATSGRAVEAAGDVDTLLLDKTGTITLGNRQASEFIPVP---------------- 324 (681)
T ss_pred Hhhhhhhh------Hh----hhhceeecCcchhhhcCCccEEEecccCceeecchhhhheecCC----------------
Confidence 11111100 22 22347899999999999999999999999999864433322111
Q ss_pred hhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEE
Q 001304 417 LNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILE 496 (1104)
Q Consensus 417 ~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~ 496 (1104)
.-+..++..+..+++- .-+.|.-..+++.|++.|+....+.. -....
T Consensus 325 -------gv~~~~la~aa~lsSl-------------~DeTpEGrSIV~LA~~~~~~~~~~~~-------------~~~~~ 371 (681)
T COG2216 325 -------GVSEEELADAAQLASL-------------ADETPEGRSIVELAKKLGIELREDDL-------------QSHAE 371 (681)
T ss_pred -------CCCHHHHHHHHHHhhh-------------ccCCCCcccHHHHHHHhccCCCcccc-------------cccce
Confidence 1123344444444331 12457788999999998854422111 00235
Q ss_pred EeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhcc--CCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHH
Q 001304 497 TLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA--GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWS 574 (1104)
Q Consensus 497 ~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~--~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~ 574 (1104)
.+||+.+.|++.+-... + .-+-|||.+.+...... +..+++++...++.++.|-.+|+++
T Consensus 372 fvpFtA~TRmSGvd~~~---~--~~irKGA~dai~~~v~~~~g~~p~~l~~~~~~vs~~GGTPL~V~------------- 433 (681)
T COG2216 372 FVPFTAQTRMSGVDLPG---G--REIRKGAVDAIRRYVRERGGHIPEDLDAAVDEVSRLGGTPLVVV------------- 433 (681)
T ss_pred eeecceecccccccCCC---C--ceeecccHHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCceEEE-------------
Confidence 67999888766665542 2 45779999999998874 3357889999999999999999999
Q ss_pred HHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 575 LMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 575 ~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
.|-+++|++.++|-+++|.+|-+.+||+.|||.+|+||||+.||..||.+.|+.
T Consensus 434 -------------------------~~~~~~GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~EAGVD- 487 (681)
T COG2216 434 -------------------------ENGRILGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAAEAGVD- 487 (681)
T ss_pred -------------------------ECCEEEEEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHhCch-
Confidence 688999999999999999999999999999999999999999999999999982
Q ss_pred CCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHH
Q 001304 655 PEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKA 734 (1104)
Q Consensus 655 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~ 734 (1104)
...++++|++|.
T Consensus 488 --------------------------------------------------------------------dfiAeatPEdK~ 499 (681)
T COG2216 488 --------------------------------------------------------------------DFIAEATPEDKL 499 (681)
T ss_pred --------------------------------------------------------------------hhhhcCChHHHH
Confidence 123578999999
Q ss_pred HHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh-hcceecccchhhHHH-HHhhhhhhhh
Q 001304 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRL-ILVHGRYSYN 804 (1104)
Q Consensus 735 ~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~-~AD~vl~~f~~l~~l-ll~~GR~~~~ 804 (1104)
.+|+.-|..|+.|+|+|||.||+|+|.+||||+|| |.|+||++ ++++|=.|-+.-+.+ ++.-|+....
T Consensus 500 ~~I~~eQ~~grlVAMtGDGTNDAPALAqAdVg~AM--NsGTqAAkEAaNMVDLDS~PTKlievV~IGKqlLi 569 (681)
T COG2216 500 ALIRQEQAEGRLVAMTGDGTNDAPALAQADVGVAM--NSGTQAAKEAANMVDLDSNPTKLIEVVEIGKQLLI 569 (681)
T ss_pred HHHHHHHhcCcEEEEcCCCCCcchhhhhcchhhhh--ccccHHHHHhhcccccCCCccceehHhhhhhhhee
Confidence 99999999999999999999999999999999999 66777776 889988876654333 2345666554
|
|
| >PF00122 E1-E2_ATPase: E1-E2 ATPase p-type cation-transporting ATPase superfamily signature H+-transporting ATPase (proton pump) signature sodium/potassium-transporting ATPase signature; InterPro: IPR008250 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.4e-28 Score=263.94 Aligned_cols=222 Identities=24% Similarity=0.398 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHhhc---ceE-EEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCcc
Q 001304 73 LIFIFAVSATKEAWDDYNRYLSDKKAN---EKE-VWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGV 148 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~~~~~n---~~~-~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~ 148 (1104)
++++++++.+.+.++++|+++..++++ +.+ ++|+|||++++++|+||+|||||+|++||.+||||++++ +|.
T Consensus 2 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~r~~~~~~i~~~~L~~GDiI~l~~g~~vPaD~~ll~----~g~ 77 (230)
T PF00122_consen 2 ILFLILLSNIIEIWQEYRSKKQLKKLNNLNPQKKVTVIRDGRWQKIPSSELVPGDIIILKAGDIVPADGILLE----SGS 77 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSSEEEEEEETTEEEEEEGGGT-TTSEEEEETTEBESSEEEEEE----SSE
T ss_pred EEEEhHHHHHHHHHHHHHHHHHHHHHhccCCCccEEEEeccccccchHhhccceeeeecccccccccCcccee----ccc
Confidence 456677888889999999988877654 444 999999999999999999999999999999999999995 377
Q ss_pred EEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeeccee
Q 001304 149 CYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYL 228 (1104)
Q Consensus 149 ~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l 228 (1104)
++||||+||||+.|+.|.+. +++.+|++++||.+
T Consensus 78 ~~vd~s~ltGes~pv~k~~~----------------------------------------------~~~~~~~i~~Gs~v 111 (230)
T PF00122_consen 78 AYVDESALTGESEPVKKTPL----------------------------------------------PLNPGNIIFAGSIV 111 (230)
T ss_dssp EEEECHHHHSBSSEEEESSS----------------------------------------------CCCTTTEE-TTEEE
T ss_pred cccccccccccccccccccc----------------------------------------------cccccchhhccccc
Confidence 99999999999999999532 23678999999999
Q ss_pred ccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCC
Q 001304 229 RNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQ 305 (1104)
Q Consensus 229 ~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 305 (1104)
.+| +++++|++||.+|+++++.. ..+.+++++++.++++...+.++.+++++++.+++..+ ..
T Consensus 112 ~~g-~~~~~Vi~tG~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~ 177 (230)
T PF00122_consen 112 VSG-WGIGVVIATGSDTKLGRILQLVSKSESKKSPLERKLNKIAKILIIIILAIAILVFIIWFFN-------------DS 177 (230)
T ss_dssp EEE-EEEEEEEE-GGGSHHHHHHHHHHTSCSS-THHHHHHHHHHHHHHHHHHHHHHHHHHHCHTG-------------ST
T ss_pred ccc-ccccccceeeecccccccccccccccccchhhhhhhHHHHHHHHhcccccchhhhccceec-------------cc
Confidence 966 99999999999999998755 44556799999999999988887777776666543321 01
Q ss_pred CcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCcccccccccccc
Q 001304 306 EFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISED 371 (1104)
Q Consensus 306 ~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~ 371 (1104)
...+...+ ..++.++..++|++|++.++++...++..+ .+. ++.+|+++++|+
T Consensus 178 ~~~~~~~~---~~~i~~l~~~~P~~l~~~~~~~~~~~~~~~------~~~----~i~v~~~~a~E~ 230 (230)
T PF00122_consen 178 GISFFKSF---LFAISLLIVLIPCALPLALPLSLAIAARRL------AKN----GIIVKNLSALEA 230 (230)
T ss_dssp TCHCCHHH---HHHHHHHHHHS-TTHHHHHHHHHHHHHHHH------HHT----TEEESSTTHHHH
T ss_pred cccccccc---ccccceeeeecccceeehHHHHHHHHHHHH------HHC----CEEEeCcccccC
Confidence 22333333 334457889999999999999888887643 332 488999998884
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the actuator (A) domain, and some transmembrane helices found in P-type ATPases []. It contains the TGES-loop which is essential for the metal ion binding which results in tight association between the A and P (phosphorylation) domains []. It does not contain the phosphorylation site. It is thought that the large movement of the actuator domain, which is transmitted to the transmembrane helices, is essential to the long distance coupling between formation/decomposition of the acyl phosphate in the cytoplasmic P-domain and the changes in the ion-binding sites buried deep in the membranous region []. This domain has a modulatory effect on the phosphoenzyme processing steps through its nucleotide binding [],[]. P-type (or E1-E2-type) ATPases that form an aspartyl phosphate intermediate in the course of ATP hydrolysis, can be divided into 4 major groups []: (1) Ca2+-transporting ATPases; (2) Na+/K+- and gastric H+/K+-transporting ATPases; (3) plasma membrane H+-transporting ATPases (proton pumps) of plants, fungi and lower eukaryotes; and (4) all bacterial P-type ATPases, except the g2+-ATPase of Salmonella typhimurium, which is more similar to the eukaryotic sequences. However, great variety of sequence analysis methods results in diversity of classification. More information about this protein can be found at Protein of the Month: ATP Synthases [].; GO: 0000166 nucleotide binding, 0046872 metal ion binding; PDB: 2XZB_A 1MHS_B 3TLM_A 3A3Y_A 2ZXE_A 3NAL_A 3NAM_A 3NAN_A 2YJ6_B 2IYE_A .... |
| >PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase) | Back alignment and domain information |
|---|
Probab=99.86 E-value=8.9e-22 Score=210.57 Aligned_cols=97 Identities=31% Similarity=0.499 Sum_probs=91.2
Q ss_pred CcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHH
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 680 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1104)
++.++|.+.+.|+++++++++|+.|+++|++++|+|||+..+|..+++++||.
T Consensus 115 ~~~~~~~~~~~d~~~~~~~~~l~~L~~~Gi~~~i~TGD~~~~a~~~~~~lgi~--------------------------- 167 (215)
T PF00702_consen 115 NLIFLGLFGLRDPLRPGAKEALQELKEAGIKVAILTGDNESTASAIAKQLGIF--------------------------- 167 (215)
T ss_dssp SHEEEEEEEEEEEBHTTHHHHHHHHHHTTEEEEEEESSEHHHHHHHHHHTTSC---------------------------
T ss_pred cCeEEEEEeecCcchhhhhhhhhhhhccCcceeeeeccccccccccccccccc---------------------------
Confidence 78999999999999999999999999999999999999999999999999981
Q ss_pred HHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc--ChhhH--HHHHHHHHhcCCeEEEEcCCccC
Q 001304 681 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQK--AQLVELLKSCDYRTLAIGDGGND 756 (1104)
Q Consensus 681 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~--sP~qK--~~iV~~lk~~~~~v~~iGDG~ND 756 (1104)
+..+++++ +|++| .++++.++..++.|+|+|||.||
T Consensus 168 ----------------------------------------~~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg~nD 207 (215)
T PF00702_consen 168 ----------------------------------------DSIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDGVND 207 (215)
T ss_dssp ----------------------------------------SEEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESSGGH
T ss_pred ----------------------------------------cccccccccccccchhHHHHHHHHhcCCCEEEEEccCHHH
Confidence 24688999 99999 99999999666799999999999
Q ss_pred hhhhhhcC
Q 001304 757 VRMIQKAD 764 (1104)
Q Consensus 757 ~~ml~~Ad 764 (1104)
++|+++||
T Consensus 208 ~~al~~Ag 215 (215)
T PF00702_consen 208 APALKAAG 215 (215)
T ss_dssp HHHHHHSS
T ss_pred HHHHHhCc
Confidence 99999997
|
This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J .... |
| >PF13246 Hydrolase_like2: Putative hydrolase of sodium-potassium ATPase alpha subunit | Back alignment and domain information |
|---|
Probab=99.50 E-value=2.1e-14 Score=129.33 Aligned_cols=89 Identities=31% Similarity=0.402 Sum_probs=71.5
Q ss_pred hhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeC
Q 001304 435 AVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC 514 (1104)
Q Consensus 435 alc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~ 514 (1104)
++||++....+++.......|+|+|.||+.++.+.|.... ..+.+..+++++++||||+||||+|+++
T Consensus 1 ~LCn~a~~~~~~~~~~~~~~G~ptE~ALl~~~~~~g~~~~----------~~~~~~~~~~~~~~pF~S~rK~msvv~~-- 68 (91)
T PF13246_consen 1 ALCNDAEIEYDDESKTEEIIGDPTEKALLRFAKKLGVGID----------IKEIRSKYKIVAEIPFDSERKRMSVVVR-- 68 (91)
T ss_pred CCccccEeecCCCCccccccCCcCHHHHHHHHHHcCCCCc----------HHHHHhhcceeEEEccCcccceeEEEEe--
Confidence 5899988765544433226899999999999999965332 1345678999999999999999999998
Q ss_pred CCCcEEEEecChHHhhhhhhc
Q 001304 515 HSGNISLLSKGADEAILPYAH 535 (1104)
Q Consensus 515 ~~~~~~l~~KGa~e~i~~~~~ 535 (1104)
+++.+++|+|||||.|+++|+
T Consensus 69 ~~~~~~~~~KGA~e~il~~Ct 89 (91)
T PF13246_consen 69 NDGKYILYVKGAPEVILDRCT 89 (91)
T ss_pred CCCEEEEEcCCChHHHHHhcC
Confidence 245688899999999999996
|
|
| >COG4087 Soluble P-type ATPase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=3.5e-13 Score=122.31 Aligned_cols=126 Identities=25% Similarity=0.401 Sum_probs=107.4
Q ss_pred cEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHH
Q 001304 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 602 l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1104)
+...+.++---++-++++++|++|++. +++.++|||..-+....|.-.|+-.
T Consensus 19 ~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gsl~~lae~~gi~~--------------------------- 70 (152)
T COG4087 19 GKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGSLVQLAEFVGIPV--------------------------- 70 (152)
T ss_pred ceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchHHHHHHHHcCCce---------------------------
Confidence 567788888889999999999999999 9999999999999999999999621
Q ss_pred HccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhh
Q 001304 682 TMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ 761 (1104)
Q Consensus 682 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~ 761 (1104)
-.+++...|+.|+.+++.|++.++.|+|+|||+||.+||+
T Consensus 71 ----------------------------------------~rv~a~a~~e~K~~ii~eLkk~~~k~vmVGnGaND~laLr 110 (152)
T COG4087 71 ----------------------------------------ERVFAGADPEMKAKIIRELKKRYEKVVMVGNGANDILALR 110 (152)
T ss_pred ----------------------------------------eeeecccCHHHHHHHHHHhcCCCcEEEEecCCcchHHHhh
Confidence 2466778899999999999999999999999999999999
Q ss_pred hcCceEEecCCchH--HHhhhcceecccchhhHHHH
Q 001304 762 KADIGVGISGREGL--QAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 762 ~AdvGIam~g~~~~--~a~~~AD~vl~~f~~l~~ll 795 (1104)
+||+||..-++++. .+..+||+++.+-.-+..++
T Consensus 111 ~ADlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~ 146 (152)
T COG4087 111 EADLGICTIQQEGVPERLLLTADVVLKEIAEILDLL 146 (152)
T ss_pred hcccceEEeccCCcchHHHhhchhhhhhHHHHHHHh
Confidence 99999966465543 34468999998866655543
|
|
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.8e-10 Score=127.73 Aligned_cols=182 Identities=20% Similarity=0.292 Sum_probs=110.9
Q ss_pred CcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC-----CCCeEEEe--cCC------
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----PKGQLLSI--DGK------ 667 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~-----~~~~~~~~--~~~------ 667 (1104)
|.+|+.- ..++.+.+.++|++++++|++++++|||+...+..+.+++++..+. .+|..+.- ++.
T Consensus 11 DGTLl~~---~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~~~~~~i~~~~ 87 (270)
T PRK10513 11 DGTLLLP---DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKAADGETVAQTA 87 (270)
T ss_pred CCcCcCC---CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEECCCCCEEEecC
Confidence 4555532 2358889999999999999999999999999999999999974321 12222221 221
Q ss_pred -cHHHHHHHHHHHHHHccc------------cC-C-------------------------CCCce--EEEEcc-hhHHHH
Q 001304 668 -TEDEVCRSLERVLLTMRI------------TT-S-------------------------EPKDV--AFVVDG-WALEIA 705 (1104)
Q Consensus 668 -~~~~~~~~~~~~~~~~~~------------~~-~-------------------------~~~~~--~lvi~g-~~l~~~ 705 (1104)
+.+.+.. +.+..+.... .. . ..... .++.+. +.++..
T Consensus 88 l~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 166 (270)
T PRK10513 88 LSYDDYLY-LEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQFPKVMMIDEPEILDAA 166 (270)
T ss_pred CCHHHHHH-HHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCceEEEEeCCHHHHHHH
Confidence 1122221 1111111000 00 0 00000 111111 122222
Q ss_pred HHHHHHHHH-hHhhhccceeeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHh
Q 001304 706 LKHYRKAFT-ELAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778 (1104)
Q Consensus 706 ~~~~~~~f~-~l~~~~~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~ 778 (1104)
.+.+.+.+. .+.......-+.+++|. +|+..++.+.+. .+.|+++|||.||++||+.|++|||| +|+..++|
T Consensus 167 ~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~NA~~~vK 245 (270)
T PRK10513 167 IARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHLGIKPEEVMAIGDQENDIAMIEYAGVGVAM-GNAIPSVK 245 (270)
T ss_pred HHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHhCCCHHHEEEECCchhhHHHHHhCCceEEe-cCccHHHH
Confidence 222222221 11112223346788887 799999988762 36799999999999999999999999 89999999
Q ss_pred hhcceeccc
Q 001304 779 RAADYSIGK 787 (1104)
Q Consensus 779 ~~AD~vl~~ 787 (1104)
+.||+|..+
T Consensus 246 ~~A~~vt~~ 254 (270)
T PRK10513 246 EVAQFVTKS 254 (270)
T ss_pred HhcCeeccC
Confidence 999999864
|
|
| >PF00689 Cation_ATPase_C: Cation transporting ATPase, C-terminus; InterPro: IPR006068 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=99.18 E-value=8e-11 Score=122.22 Aligned_cols=166 Identities=13% Similarity=0.162 Sum_probs=113.1
Q ss_pred hhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhheee-c
Q 001304 837 SLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYA-Y 915 (1104)
Q Consensus 837 ~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 915 (1104)
.++++.|++|+|+++|.+|++++++| ++++++|++||+ .+++.+++.+.+......|++++++.++..+.... +
T Consensus 2 ~Pl~~~qiL~inli~d~~~a~al~~e--~~~~~im~r~Pr---~~~~~l~~~~~~~~i~~~g~~~~~~~~~~f~~~~~~~ 76 (182)
T PF00689_consen 2 LPLTPIQILWINLITDLLPALALGFE--PPDPDIMKRPPR---DPNEPLINKRLLRRILIQGLIMAAACFFAFFLGLYIF 76 (182)
T ss_dssp -SS-HHHHHHHHHTTTHHHHHHGGGS--S-STTGGGS------TTTS-SSSHHHHHHHCCHHHHHHHHHHHHHHHHHHST
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHhcC--cchhhhhhcccc---ccchhhccHHhHhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 46899999999999999999998988 589999999994 78889999999888877898888877766544332 2
Q ss_pred cccc---------ceeeeehhhhHHHHHHHHhhhhccc-cch---HHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHH
Q 001304 916 EKSE---------MEEVSMVALSGCIWLQAFVVALETN-SFT---VFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFR 982 (1104)
Q Consensus 916 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~ 982 (1104)
+... .+|+.+.+++.+.+++.+.++...+ .|. ...+..+++++++.++++.++.++|..+. .++
T Consensus 77 ~~~~~~~~~~~~~a~T~~F~~lv~~q~~~~~~~r~~~~~~~~~~~~~~N~~l~~~~~~~~~l~~~i~~~P~~~~---~f~ 153 (182)
T PF00689_consen 77 GWDEETNNDNLAQAQTMAFTALVLSQLFNAFNCRSRRRSVFRFRGIFSNKWLLIAILISIALQILIVYVPGLNR---IFG 153 (182)
T ss_dssp CSSSHHHTTCHHHHHHHHHHHHHHHHHHHHHHTSSSSSTCTT-STGGGSHHHHHHHHHHHHHHHHHHHSTTHHH---HST
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHhhhcccccccccceecccccccchHHHHHHHHHHHHHHHhcchhhHh---hhc
Confidence 2211 2333444444455555556655332 232 34567777778888888888888887553 344
Q ss_pred hcc-CHHHHHHHHHHHHHHHHHHHHHHHH
Q 001304 983 LCS-QPSYWITMFLIVAAGMGPIVALKYF 1010 (1104)
Q Consensus 983 ~~~-~~~~w~~ill~~~~~llp~~i~k~~ 1010 (1104)
+.+ +...|+.+++..++.++..++.|++
T Consensus 154 ~~~l~~~~w~~~l~~~~~~~~~~ei~K~i 182 (182)
T PF00689_consen 154 TAPLPLWQWLICLALALLPFIVDEIRKLI 182 (182)
T ss_dssp ----THHHHHCHHHHHCHHHHHHHHHHHH
T ss_pred ccCCCHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 433 7889988888888888888888864
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved C-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3A3Y_A 2ZXE_A 2XZB_A 3B9B_A 3N5K_A 3FPS_A 3B9R_A 1WPG_C 2AGV_A 2O9J_A .... |
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.3e-10 Score=126.94 Aligned_cols=173 Identities=20% Similarity=0.189 Sum_probs=106.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEE-ecC-------CcHHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDG-------KTEDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~ 682 (1104)
.+.+.++++|++++++|++++++|||+...+..+..++++..+ ..+|..+. .++ -+.+.+...++.....
T Consensus 19 ~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~~l~~~~i~~~~~~~i~~~~~~~ 98 (272)
T PRK15126 19 HLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGELLHRQDLPADVAELVLHQQWDT 98 (272)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCCEEEeecCCHHHHHHHHHHhhhc
Confidence 5889999999999999999999999999999999999997432 11122222 112 1122222222111000
Q ss_pred -cc--c---------cC-------------------------CCCCceEEEEcchhHHHHHHHHHHHHHh-Hhhhcccee
Q 001304 683 -MR--I---------TT-------------------------SEPKDVAFVVDGWALEIALKHYRKAFTE-LAILSRTAI 724 (1104)
Q Consensus 683 -~~--~---------~~-------------------------~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~~~~i 724 (1104)
.. . .. ....+..+..+.+.++.+.+.+.+.|.. +.......-
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~ 178 (272)
T PRK15126 99 RASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCGDHDDLTRLQIQLNEALGERAHLCFSATD 178 (272)
T ss_pred CcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEEcCCc
Confidence 00 0 00 0000111111222333333333333321 111122234
Q ss_pred eeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcce--ecc
Q 001304 725 CCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY--SIG 786 (1104)
Q Consensus 725 ~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~--vl~ 786 (1104)
+.+++|. +|+..++.+.+. .+.|+++|||.||++||+.|+.|||| ||+..++|++||+ ++.
T Consensus 179 ~~eI~~~g~sKg~al~~l~~~~gi~~~~v~afGD~~NDi~Ml~~ag~~vAm-~Na~~~vK~~A~~~~v~~ 247 (272)
T PRK15126 179 CLEVLPVGCNKGAALAVLSQHLGLSLADCMAFGDAMNDREMLGSVGRGFIM-GNAMPQLRAELPHLPVIG 247 (272)
T ss_pred EEEeecCCCChHHHHHHHHHHhCCCHHHeEEecCCHHHHHHHHHcCCceec-cCChHHHHHhCCCCeecC
Confidence 6788888 699999988762 36799999999999999999999999 9999999999986 554
|
|
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=6.2e-10 Score=123.19 Aligned_cols=174 Identities=22% Similarity=0.226 Sum_probs=105.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEE-ecCCc-------HHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-IDGKT-------EDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~-~~~~~-------~~~~~~~~~~~~~~ 682 (1104)
.+.+.+.++|++++++|++++++|||+...+..+..++++..+ ..+|.++. .++.. .+.+.+.++...+.
T Consensus 19 ~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~~~~~~ 98 (266)
T PRK10976 19 TLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGNLIFSHNLDRDIASDLFGVVHDN 98 (266)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCCEehhhcCCHHHHHHHHHhhccc
Confidence 4888999999999999999999999999999999999987432 11122222 12211 11111111111000
Q ss_pred --cc--cc--------CC-----------------------CCCc-eE-EEEc--chhHHHHHHHHHHHHHh-Hhhhccc
Q 001304 683 --MR--IT--------TS-----------------------EPKD-VA-FVVD--GWALEIALKHYRKAFTE-LAILSRT 722 (1104)
Q Consensus 683 --~~--~~--------~~-----------------------~~~~-~~-lvi~--g~~l~~~~~~~~~~f~~-l~~~~~~ 722 (1104)
.. .. .. .... .. ++.. .+.++.+.+.+.+.+.. +......
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s~ 178 (266)
T PRK10976 99 PDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTCDSHEKLLPLEQAINARWGDRVNVSFST 178 (266)
T ss_pred CCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEcCCHHHHHHHHHHHHHHhCCcEEEEEeC
Confidence 00 00 00 0000 01 1111 12222222233333321 2111222
Q ss_pred eeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcc--eeccc
Q 001304 723 AICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD--YSIGK 787 (1104)
Q Consensus 723 ~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD--~vl~~ 787 (1104)
.-+.+++|. +|+..++.+.+ . .+.|+++|||.||++||+.|+.|||| +|+..++|+.|| ++..+
T Consensus 179 ~~~~eI~~~gvsKg~al~~l~~~lgi~~~~viafGD~~NDi~Ml~~ag~~vAm-~NA~~~vK~~A~~~~v~~~ 250 (266)
T PRK10976 179 LTCLEVMAGGVSKGHALEAVAKKLGYSLKDCIAFGDGMNDAEMLSMAGKGCIM-GNAHQRLKDLLPELEVIGS 250 (266)
T ss_pred CceEEEEcCCCChHHHHHHHHHHcCCCHHHeEEEcCCcccHHHHHHcCCCeee-cCCcHHHHHhCCCCeeccc
Confidence 346788887 69999998876 2 36799999999999999999999999 999999999887 66653
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.10 E-value=5.7e-10 Score=123.30 Aligned_cols=167 Identities=25% Similarity=0.386 Sum_probs=110.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC--------------cHHHHHHHHHHH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK--------------TEDEVCRSLERV 679 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~ 679 (1104)
+.+.++++|+++++.|+++.++|||+...+..+.+++++..+ ++..+|. +.+.+....+ .
T Consensus 21 i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~-----~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~-~ 94 (264)
T COG0561 21 ISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGP-----LITFNGALIYNGGELLFQKPLSREDVEELLE-L 94 (264)
T ss_pred cCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCcc-----EEEeCCeEEecCCcEEeeecCCHHHHHHHHH-H
Confidence 889999999999999999999999999999999999998652 3333332 1222222221 1
Q ss_pred HHHc-----cccCC--------C----------------------CC---ceEEEEcchhHHHHHHHHHHHHHhHhh--h
Q 001304 680 LLTM-----RITTS--------E----------------------PK---DVAFVVDGWALEIALKHYRKAFTELAI--L 719 (1104)
Q Consensus 680 ~~~~-----~~~~~--------~----------------------~~---~~~lvi~g~~l~~~~~~~~~~f~~l~~--~ 719 (1104)
.... ..... . .. ...+..+.+.+....+.+.+.+..... .
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 174 (264)
T COG0561 95 LEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVS 174 (264)
T ss_pred HHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEE
Confidence 1111 00000 0 00 012222234444544445555442211 2
Q ss_pred ccceeeeccChh--hHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 720 SRTAICCRVTPS--QKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 720 ~~~~i~~r~sP~--qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.....+.+++|. +|+..++.+.+ .| +.|+++||+.||++||+.|+.|||| ||+...+++.||++...
T Consensus 175 ~s~~~~lei~~~g~~K~~al~~l~~~lgi~~~~v~afGD~~ND~~Ml~~ag~gvam-~Na~~~~k~~A~~vt~~ 247 (264)
T COG0561 175 SSGPISLDITPKGVSKGYALQRLAKLLGIKLEEVIAFGDSTNDIEMLEVAGLGVAM-GNADEELKELADYVTTS 247 (264)
T ss_pred EcCCceEEEecCCCchHHHHHHHHHHhCCCHHHeEEeCCccccHHHHHhcCeeeec-cCCCHHHHhhCCcccCC
Confidence 222333788887 79999998876 33 4699999999999999999999999 88888888999977553
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.7e-09 Score=118.45 Aligned_cols=171 Identities=20% Similarity=0.313 Sum_probs=117.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC---------------cHHHHHHHH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------------TEDEVCRSL 676 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~---------------~~~~~~~~~ 676 (1104)
..+.+++.++|++++++|++++++|||.+..+..+..++++..+ .+..+|. ..+.+...+
T Consensus 14 ~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~-----~I~~nGa~i~~~~~~~l~~~~i~~~~~~~i~ 88 (254)
T PF08282_consen 14 GKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDY-----FICSNGALIDDPKGKILYEKPIDSDDVKKIL 88 (254)
T ss_dssp SSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSE-----EEEGGGTEEEETTTEEEEEESB-HHHHHHHH
T ss_pred CeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhh-----hcccccceeeecccccchhhheeccchhhee
Confidence 34778999999999999999999999999999999999997522 2222222 222232222
Q ss_pred HHHHHH-ccc----------c----------------------------CCCCCceEEEEcchhHHHHHHHHHHHHHhH-
Q 001304 677 ERVLLT-MRI----------T----------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTEL- 716 (1104)
Q Consensus 677 ~~~~~~-~~~----------~----------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l- 716 (1104)
+..... +.. . .....++.+..+...++.+.+++.+.+...
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~l~~~l~~~~~~~~ 168 (254)
T PF08282_consen 89 KYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDPEDLEQLREELKKKFPNLI 168 (254)
T ss_dssp HHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCHHHHHHHHHHHHHHHTTTE
T ss_pred ehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccchhhhhhhhhhccccCcce
Confidence 222211 000 0 001122333445556666666677766543
Q ss_pred hhhccceeeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 717 AILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 717 ~~~~~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
.......-+.+++|. .|+..++.+.+ ..+.++++||+.||.+||+.|+.||+| +++...+++.||++...-
T Consensus 169 ~~~~~~~~~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~~GD~~ND~~Ml~~~~~~~am-~na~~~~k~~a~~i~~~~ 245 (254)
T PF08282_consen 169 DVVRSSPYFLEITPKGVSKGSAIKYLLEYLGISPEDIIAFGDSENDIEMLELAGYSVAM-GNATPELKKAADYITPSN 245 (254)
T ss_dssp EEEEEETTEEEEEETTSSHHHHHHHHHHHHTTSGGGEEEEESSGGGHHHHHHSSEEEEE-TTS-HHHHHHSSEEESSG
T ss_pred eEEEecccceEEeeCCCCHHHHHHHHhhhcccccceeEEeecccccHhHHhhcCeEEEE-cCCCHHHHHhCCEEecCC
Confidence 333344566788886 69999998876 246899999999999999999999999 888888999999988753
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.9e-09 Score=116.58 Aligned_cols=172 Identities=20% Similarity=0.216 Sum_probs=103.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEec--CC-----cHHHHHHHHHHHHHHcc
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID--GK-----TEDEVCRSLERVLLTMR 684 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~ 684 (1104)
+.+.+.++|++++++|++++++|||+...+..+++.+|+..+ ..++..+... +. ..+.....++.......
T Consensus 21 i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (230)
T PRK01158 21 LSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDGKRIFLGDIEECEKAYSELKKRFP 100 (230)
T ss_pred cCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCCCEEEEcchHHHHHHHHHHHHhcc
Confidence 788999999999999999999999999999999999987432 1112222211 11 11122222222111110
Q ss_pred c-----cCC--CCCceEE-EEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhh--HHHHHHHHHhc----CCeEEEE
Q 001304 685 I-----TTS--EPKDVAF-VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQ--KAQLVELLKSC----DYRTLAI 750 (1104)
Q Consensus 685 ~-----~~~--~~~~~~l-vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~q--K~~iV~~lk~~----~~~v~~i 750 (1104)
. ... ......+ +......+...+.+. .+..-........+.++.|.. |+..++.+.+. ...++++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~~ 179 (230)
T PRK01158 101 EASTSLTKLDPDYRKTEVALRRTVPVEEVRELLE-ELGLDLEIVDSGFAIHIKSPGVNKGTGLKKLAELMGIDPEEVAAI 179 (230)
T ss_pred ccceeeecCCcccccceeeecccccHHHHHHHHH-HcCCcEEEEecceEEEEeeCCCChHHHHHHHHHHhCCCHHHEEEE
Confidence 0 000 0001111 112222222222111 111000111122356777774 99988888652 3579999
Q ss_pred cCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 751 GDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
|||.||++|++.|++||+| +|+..++++.||++..+
T Consensus 180 GD~~NDi~m~~~ag~~vam-~Na~~~vk~~a~~v~~~ 215 (230)
T PRK01158 180 GDSENDLEMFEVAGFGVAV-ANADEELKEAADYVTEK 215 (230)
T ss_pred CCchhhHHHHHhcCceEEe-cCccHHHHHhcceEecC
Confidence 9999999999999999999 88888899999998864
|
|
| >KOG4383 consensus Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=99.04 E-value=1.1e-06 Score=100.02 Aligned_cols=254 Identities=16% Similarity=0.219 Sum_probs=156.6
Q ss_pred HHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH------
Q 001304 596 QRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------ 669 (1104)
Q Consensus 596 ~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~------ 669 (1104)
.+.-.+-.|.|++...-+.+.+....|+.|-++.|+.+..+-.+.....-+|.++||...... -+.+.....
T Consensus 809 ~Qa~sGQIf~GlVs~~Yea~ldiVriIdgL~naCiRfVYFS~EdELkSkVFAEKlGiEaGWNC--HISLa~~~d~Pg~e~ 886 (1354)
T KOG4383|consen 809 DQAFSGQIFCGLVSLHYEAILDIVRIIDGLDNACIRFVYFSKEDELKSKVFAEKLGIEAGWNC--HISLAEEEDAPGREA 886 (1354)
T ss_pred HHHhccchhhhhhhhhccchhhHHHHHHHhhhhheeeeeecchHHHHHHHHHHHhccccccce--eEEeccCCCCCcccC
Confidence 334467899999999999999999999999999999999999999999999999999765322 222211100
Q ss_pred ----HH-HH--HHHHHHHHHccccCCCCC----------------------ceEEEEcchhHHHHHHHHHHHHHhHhhhc
Q 001304 670 ----DE-VC--RSLERVLLTMRITTSEPK----------------------DVAFVVDGWALEIALKHYRKAFTELAILS 720 (1104)
Q Consensus 670 ----~~-~~--~~~~~~~~~~~~~~~~~~----------------------~~~lvi~g~~l~~~~~~~~~~f~~l~~~~ 720 (1104)
+. .. ..+.+.++.+..++.+.. +++-.-+-..|.....+.+.|+.++..+.
T Consensus 887 ~pa~~q~a~qkpSlhddlnqia~ddaeg~lL~~Eeg~~dliSfq~~dsdi~kf~ed~N~AkLPrGihnVRPHL~~iDNVP 966 (1354)
T KOG4383|consen 887 GPAHEQFAAQKPSLHDDLNQIALDDAEGELLDCEEGARDLISFQKMDSDIAKFAEDPNIAKLPRGIHNVRPHLDEIDNVP 966 (1354)
T ss_pred CCCChhhhccCcchhHHHHHhhhcccccceeehhhcccCCccccccccchhhhcCCCchhhcCcchhhcCcccccccCcc
Confidence 00 00 011111221111110000 00000000111111122233333333222
Q ss_pred -cceeeeccChhhHHHHHHHHHhcCCeEEEEcCCcc--ChhhhhhcCceEEecCCchH-------------HHhhhcc--
Q 001304 721 -RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGN--DVRMIQKADIGVGISGREGL-------------QAARAAD-- 782 (1104)
Q Consensus 721 -~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~N--D~~ml~~AdvGIam~g~~~~-------------~a~~~AD-- 782 (1104)
-...|.+++|+.--+.++.+|+.|++|++.|...| ..-.+-+||++|++-.-+.. ..+++.|
T Consensus 967 LLV~LFTDcnpeamcEMIeIMQE~GEVtcclGS~aN~rNSciflkadISialD~l~~~~C~~e~fg~assismaqandgl 1046 (1354)
T KOG4383|consen 967 LLVGLFTDCNPEAMCEMIEIMQENGEVTCCLGSCANARNSCIFLKADISIALDDLEEPACRLEDFGVASSISMAQANDGL 1046 (1354)
T ss_pred eeeeeccCCCHHHHHHHHHHHHHcCcEEEEeccccccccceEEEccceeEEeccCCCccceecccccchhhhhhhhcCCC
Confidence 14578999999999999999999999999999988 44456889999987222111 0122233
Q ss_pred --eec--------ccchh-----hHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHH
Q 001304 783 --YSI--------GKFRF-----LKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMA 846 (1104)
Q Consensus 783 --~vl--------~~f~~-----l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~ 846 (1104)
..+ .+|++ ++.. +++..|....-+++..+|.++..+++..++++-.++.. +++|+..+++|
T Consensus 1047 splQiSgqLnaL~c~~~f~~ee~ikiirLIe~ARHa~~g~R~cfLFiLq~qL~l~Vi~flSc~~~L---P~i~s~sdii~ 1123 (1354)
T KOG4383|consen 1047 SPLQISGQLNALACDFRFDHEELIKIIRLIECARHAMSGFRHCFLFILQAQLLLSVIIFLSCFFFL---PIIFSHSDIIL 1123 (1354)
T ss_pred CceeecccccccccccchhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHhc---cchhccchHHH
Confidence 111 12332 3333 45778888888889999999988888887777655432 45688888888
Q ss_pred HHHHhhhh
Q 001304 847 YNVFYTSI 854 (1104)
Q Consensus 847 ~nl~~~~l 854 (1104)
...+...+
T Consensus 1124 lScfc~Pl 1131 (1354)
T KOG4383|consen 1124 LSCFCIPL 1131 (1354)
T ss_pred HHHHHHHH
Confidence 77655433
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=98.98 E-value=3.3e-09 Score=113.34 Aligned_cols=171 Identities=17% Similarity=0.220 Sum_probs=104.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEecCCcH-------HHHHHHHHHHHHHc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGKTE-------DEVCRSLERVLLTM 683 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~ 683 (1104)
++.+++.++|++|+++|+++.++||+.+..+..+++.+++..+ ..++.++...+... ..............
T Consensus 18 ~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (215)
T TIGR01487 18 MISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDIFLANMEEEWFLDEEKKKRFPR 97 (215)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcEEEecccchhhHHHhhhhhhhh
Confidence 4889999999999999999999999999999999999987533 11121222211110 00000000000000
Q ss_pred cccC-CC-CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCcc
Q 001304 684 RITT-SE-PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGN 755 (1104)
Q Consensus 684 ~~~~-~~-~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~N 755 (1104)
.... .. .....+..+....+...+.+.+ ..+.... ...+..++|. +|+..++.+.+ . ...++++||+.|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~-~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~iGDs~N 174 (215)
T TIGR01487 98 DRLSNEYPRASLVIMREGKDVDEVREIIKE--RGLNLVD-SGFAIHIMKKGVDKGVGVEKLKELLGIKPEEVAAIGDSEN 174 (215)
T ss_pred hhcccccceeEEEEecCCccHHHHHHHHHh--CCeEEEe-cCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCCHH
Confidence 0000 00 1112223344443333332222 1111111 1234566665 79999988865 2 346999999999
Q ss_pred ChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 756 DVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 756 D~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
|.+|++.|++|++| +|+.+++++.||++..+
T Consensus 175 D~~ml~~ag~~vam-~na~~~~k~~A~~v~~~ 205 (215)
T TIGR01487 175 DIDLFRVVGFKVAV-ANADDQLKEIADYVTSN 205 (215)
T ss_pred HHHHHHhCCCeEEc-CCccHHHHHhCCEEcCC
Confidence 99999999999999 88888899999999863
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=98.96 E-value=8.4e-09 Score=111.09 Aligned_cols=168 Identities=17% Similarity=0.232 Sum_probs=101.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH---------------HH-HHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE---------------DE-VCRSL 676 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~---------------~~-~~~~~ 676 (1104)
.+.+.+.++|++++++|++++++|||+...+..+++.+|+..+ ++..+|... .. .....
T Consensus 15 ~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~-----~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~ 89 (225)
T TIGR01482 15 AINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDP-----VIAENGGEISYNEGMDDIFLAYLEEEWFLDIV 89 (225)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCe-----EEEecCcEEEeCCCCceEEecccCHHHHHHHH
Confidence 4778899999999999999999999999999999999985322 222232210 00 00001
Q ss_pred HHHH---HHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeE
Q 001304 677 ERVL---LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRT 747 (1104)
Q Consensus 677 ~~~~---~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v 747 (1104)
.... ...............+......+.. ....+.+..-........+.++.|. +|+..++.+.+ . .+.+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ei~~~~~~K~~~i~~l~~~~~i~~~~~ 168 (225)
T TIGR01482 90 IAKTFPFSRLKVQYPRRASLVKMRYGIDVDTV-REIIKELGLNLVAVDSGFDIHILPQGVNKGVAVKKLKEKLGIKPGET 168 (225)
T ss_pred HhcccchhhhccccccccceEEEeecCCHHHH-HHHHHhcCceEEEecCCcEEEEeeCCCCHHHHHHHHHHHhCCCHHHE
Confidence 1000 0000000011111122222122211 1122222110001112346677775 79988888765 2 3679
Q ss_pred EEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 748 LAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 748 ~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
+++||+.||++|++.|++|++| +|+...++..||+|..+
T Consensus 169 i~~GD~~NDi~m~~~ag~~vam-~Na~~~~k~~A~~vt~~ 207 (225)
T TIGR01482 169 LVCGDSENDIDLFEVPGFGVAV-ANAQPELKEWADYVTES 207 (225)
T ss_pred EEECCCHhhHHHHHhcCceEEc-CChhHHHHHhcCeecCC
Confidence 9999999999999999999999 88888899999998753
|
catalyze the same reaction as SPP. |
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=98.95 E-value=8.5e-09 Score=123.35 Aligned_cols=63 Identities=29% Similarity=0.381 Sum_probs=55.2
Q ss_pred eeeccChh--hHHHHHHHHHhc-C---CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 724 ICCRVTPS--QKAQLVELLKSC-D---YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~-~---~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.+.+++|. +|+..++.+.+. | +.|++||||.||++||+.|++|||| ||+..++|+.||+|..+
T Consensus 497 ~~lEI~p~gvSKG~ALk~L~e~lGI~~eeviAFGDs~NDIeMLe~AG~gVAM-gNA~eeVK~~Ad~VT~s 565 (580)
T PLN02887 497 DMLEIVPPGTSKGNGVKMLLNHLGVSPDEIMAIGDGENDIEMLQLASLGVAL-SNGAEKTKAVADVIGVS 565 (580)
T ss_pred cEEEEecCCCCHHHHHHHHHHHcCCCHHHEEEEecchhhHHHHHHCCCEEEe-CCCCHHHHHhCCEEeCC
Confidence 46788887 699999988763 3 5799999999999999999999999 99999999999998864
|
|
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.93 E-value=1.5e-08 Score=112.48 Aligned_cols=172 Identities=19% Similarity=0.192 Sum_probs=100.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEE---------ecCCcHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS---------IDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~---------~~~~~~~~~~~~~~~~~~ 681 (1104)
.+.+.+.++|++++++|++++++|||++..+..+++++++..+ ..+|.++. -..-+.+.+...++. ..
T Consensus 20 ~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~~~l~~~~l~~~~~~~i~~~-~~ 98 (272)
T PRK10530 20 TILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAKKVLEADPLPVQQALQVIEM-LD 98 (272)
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCCEEEEecCCCHHHHHHHHHH-HH
Confidence 4788999999999999999999999999999999999987432 01111221 111112222222211 11
Q ss_pred Hcccc------------CC----------------------------------CCCceEEEEcch---hHHHHHHHHHHH
Q 001304 682 TMRIT------------TS----------------------------------EPKDVAFVVDGW---ALEIALKHYRKA 712 (1104)
Q Consensus 682 ~~~~~------------~~----------------------------------~~~~~~lvi~g~---~l~~~~~~~~~~ 712 (1104)
..... .. ......++.... .++...+.+.++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 178 (272)
T PRK10530 99 EHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQVNAIWKFALTHEDLPQLQHFAKHVEHE 178 (272)
T ss_pred hCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhhcCCcEEEEEecCCHHHHHHHHHHHhhh
Confidence 10000 00 000011112111 111222222222
Q ss_pred HHhHhhhccceeeeccChh--hHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecc
Q 001304 713 FTELAILSRTAICCRVTPS--QKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG 786 (1104)
Q Consensus 713 f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~ 786 (1104)
+. +.......-+.+++|. .|+..++.+.+ .| +.+++|||+.||++|++.|++||+| |++..+++..||++..
T Consensus 179 ~~-~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~~GD~~NDi~m~~~ag~~vam-gna~~~lk~~Ad~v~~ 256 (272)
T PRK10530 179 LG-LECEWSWHDQVDIARKGNSKGKRLTQWVEAQGWSMKNVVAFGDNFNDISMLEAAGLGVAM-GNADDAVKARADLVIG 256 (272)
T ss_pred cC-ceEEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHeEEeCCChhhHHHHHhcCceEEe-cCchHHHHHhCCEEEe
Confidence 11 1110011123466665 69988887654 33 5799999999999999999999999 7888888889999886
Q ss_pred c
Q 001304 787 K 787 (1104)
Q Consensus 787 ~ 787 (1104)
+
T Consensus 257 ~ 257 (272)
T PRK10530 257 D 257 (272)
T ss_pred c
Confidence 4
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.9e-08 Score=111.35 Aligned_cols=170 Identities=16% Similarity=0.194 Sum_probs=97.4
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC-C--CCCCeEEEec--------------CCcHHHHHHHH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSID--------------GKTEDEVCRSL 676 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~-~--~~~~~~~~~~--------------~~~~~~~~~~~ 676 (1104)
+.+.++++|++|+++||+++++|||....+..+++++|+.. + ..+|..+... ..+.+.+...+
T Consensus 25 i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~~~~~~~~~~~~~~l~~~~~~~i~ 104 (271)
T PRK03669 25 DWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQWQDHPDFPRIISGISHGEIRQVL 104 (271)
T ss_pred CcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCcccCCCCceEeecCCCHHHHHHHH
Confidence 55779999999999999999999999999999999999732 1 1122222221 11122222222
Q ss_pred HHHHHHccc--------------------------cCCCCCceEEEEcc--hhHHHHHHHHHHHHHhHhhhccceeeecc
Q 001304 677 ERVLLTMRI--------------------------TTSEPKDVAFVVDG--WALEIALKHYRKAFTELAILSRTAICCRV 728 (1104)
Q Consensus 677 ~~~~~~~~~--------------------------~~~~~~~~~lvi~g--~~l~~~~~~~~~~f~~l~~~~~~~i~~r~ 728 (1104)
+...+.... .........+.+.. ..+..+.+.+.+. .+.... ...+.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~-~~~~iEi 181 (271)
T PRK03669 105 NTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDSDERMAQFTARLAEL--GLQFVQ-GARFWHV 181 (271)
T ss_pred HHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCCHHHHHHHHHHHHHC--CCEEEe-cCeeEEE
Confidence 211111000 00000011122222 1222222222211 111111 2236688
Q ss_pred Chh--hHHHHHHHHHh-------cCCeEEEEcCCccChhhhhhcCceEEecCCch-H--HH---hhhcceeccc
Q 001304 729 TPS--QKAQLVELLKS-------CDYRTLAIGDGGNDVRMIQKADIGVGISGREG-L--QA---ARAADYSIGK 787 (1104)
Q Consensus 729 sP~--qK~~iV~~lk~-------~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~-~--~a---~~~AD~vl~~ 787 (1104)
+|. +|+..++.+.+ ..+.|+++|||.||++||+.|++|||| |+.. . .+ +..||++...
T Consensus 182 ~~~g~sKg~al~~l~~~lgi~~~~~~~viafGDs~NDi~Ml~~ag~gvAM-~~~~~~~~~l~~~~~~~~~~~~~ 254 (271)
T PRK03669 182 LDASAGKDQAANWLIATYQQLSGTRPTTLGLGDGPNDAPLLDVMDYAVVV-KGLNREGVHLQDDDPARVYRTQR 254 (271)
T ss_pred ecCCCCHHHHHHHHHHHHHhhcCCCceEEEEcCCHHHHHHHHhCCEEEEe-cCCCCCCcccccccCCceEeccC
Confidence 886 79998887765 346799999999999999999999999 5333 1 12 2367887754
|
|
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=98.85 E-value=3.7e-08 Score=108.33 Aligned_cols=173 Identities=20% Similarity=0.298 Sum_probs=104.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEe--------cCCcHHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI--------DGKTEDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~~ 682 (1104)
++.+++.++|++++++|++++++|||+...+..+..++++..+ ..++..+.. ..-+.+.+...++. +..
T Consensus 16 ~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~i~~~~~~~i~~~-~~~ 94 (256)
T TIGR00099 16 TISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILYKKPLDLDLVEEILNF-LKK 94 (256)
T ss_pred ccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEeecCCCHHHHHHHHHH-HHH
Confidence 5788999999999999999999999999999999999887422 111112221 11122222222221 111
Q ss_pred ccc------------cCCC---------------------------CCceEEEE-cchhHHHHHHHHHH-HHH-hHhhhc
Q 001304 683 MRI------------TTSE---------------------------PKDVAFVV-DGWALEIALKHYRK-AFT-ELAILS 720 (1104)
Q Consensus 683 ~~~------------~~~~---------------------------~~~~~lvi-~g~~l~~~~~~~~~-~f~-~l~~~~ 720 (1104)
... .... .....++. +.+.++.+.+.+.+ .+. .+....
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (256)
T TIGR00099 95 HGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLDPEDLDLLIEALNKLELEENVSVVS 174 (256)
T ss_pred cCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECCHHHHHHHHHHhhhhhhcCCEEEEE
Confidence 000 0000 00001111 11122222222221 111 111112
Q ss_pred cceeeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 721 RTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 721 ~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
...-+.+++|. +|+..++.+.+. .+.++++||+.||++|++.|++|++| +++...++..||+++.+
T Consensus 175 s~~~~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~~GD~~nD~~m~~~~~~~~a~-~na~~~~k~~a~~~~~~ 246 (256)
T TIGR00099 175 SGPYSIEITAKGVSKGSALQSLAEALGISLEDVIAFGDGMNDIEMLEAAGYGVAM-GNADEELKALADYVTDS 246 (256)
T ss_pred ecCceEEecCCCCChHHHHHHHHHHcCCCHHHEEEeCCcHHhHHHHHhCCceeEe-cCchHHHHHhCCEEecC
Confidence 23346678887 699999988763 36799999999999999999999999 78888888899999864
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=98.74 E-value=1.3e-07 Score=103.87 Aligned_cols=170 Identities=13% Similarity=0.099 Sum_probs=97.1
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEecC--------------CcHHHHHHHHH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG--------------KTEDEVCRSLE 677 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~~--------------~~~~~~~~~~~ 677 (1104)
..+.+.++|+.|+++|++++++|||....+..+.+++|+..+ ..+|..+...+ -+.+.+...++
T Consensus 17 ~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~i~~~~~~~il~ 96 (256)
T TIGR01486 17 DWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTEPEYPVIALGIPYEKIRARLE 96 (256)
T ss_pred CchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccCCCeEEEEcCCCHHHHHHHHH
Confidence 445689999999999999999999999999999999997432 11222222211 11122222222
Q ss_pred HHHHHcc--c------------------------cCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh
Q 001304 678 RVLLTMR--I------------------------TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS 731 (1104)
Q Consensus 678 ~~~~~~~--~------------------------~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~ 731 (1104)
....... . .........++.+.+.++.+.+.+.+. .+.... ...+.++.|.
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-s~~~~ei~~~ 173 (256)
T TIGR01486 97 ELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSETILWSEERRERFTEALVEL--GLEVTH-GNRFYHVLGA 173 (256)
T ss_pred HHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCceecChHHHHHHHHHHHHc--CCEEEe-CCceEEEecC
Confidence 1111000 0 000001111112222222222222110 111111 1235667776
Q ss_pred --hHHHHHHHHHh----c--CCeEEEEcCCccChhhhhhcCceEEecCCch---HHHhhh--c-ceeccc
Q 001304 732 --QKAQLVELLKS----C--DYRTLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--A-DYSIGK 787 (1104)
Q Consensus 732 --qK~~iV~~lk~----~--~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~---~~a~~~--A-D~vl~~ 787 (1104)
.|+..++.+.+ . .+.++++||+.||.+|++.|++|||| +|+. .+++.. | +++...
T Consensus 174 ~~~Kg~ai~~l~~~~~i~~~~~~~~a~GD~~ND~~Ml~~ag~~vam-~Na~~~~~~lk~~~~a~~~vt~~ 242 (256)
T TIGR01486 174 GSDKGKAANALKQFYNQPGGAIKVVGLGDSPNDLPLLEVVDLAVVV-PGPNGPNVSLKPGDPGSFLLTPA 242 (256)
T ss_pred CCCHHHHHHHHHHHHhhcCCCceEEEEcCCHhhHHHHHHCCEEEEe-CCCCCCccccCccCCCcEEEcCC
Confidence 68888777764 2 56799999999999999999999999 7765 356665 4 476643
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.6e-08 Score=101.39 Aligned_cols=124 Identities=25% Similarity=0.273 Sum_probs=87.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|++++.|+.+++.| ++.++||-....+..+++++|+...-.+ -+.+++..
T Consensus 68 ~l~pga~ell~~lk~~~-~~~IVS~~~~~~~~~il~~lgi~~~~an--~l~~~~~g------------------------ 120 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERF-QVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDDSD------------------------ 120 (203)
T ss_pred CCCccHHHHHHHHHhCC-eEEEEeCChHHHHHHHHHHcCCchhhce--eeEEecCC------------------------
Confidence 47999999999999975 9999999999999999999998421110 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
.++| ..+ ..+..|..+++.+++.+..++++|||.||++|++.||+||++.++
T Consensus 121 ---~~tG----------------------~~~---~~~~~K~~~l~~l~~~~~~~v~vGDs~nDl~ml~~Ag~~ia~~ak 172 (203)
T TIGR02137 121 ---RVVG----------------------YQL---RQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILFHAP 172 (203)
T ss_pred ---eeEC----------------------eee---cCcchHHHHHHHHHhhCCCEEEEeCCHHHHHHHHhCCCCEEecCC
Confidence 0000 001 346789999999988888899999999999999999999999555
Q ss_pred chHHHhhhc-ceecc-cchhhHH
Q 001304 773 EGLQAARAA-DYSIG-KFRFLKR 793 (1104)
Q Consensus 773 ~~~~a~~~A-D~vl~-~f~~l~~ 793 (1104)
+. ++++| |+-.. +..-+..
T Consensus 173 ~~--~~~~~~~~~~~~~~~~~~~ 193 (203)
T TIGR02137 173 EN--VIREFPQFPAVHTYEDLKR 193 (203)
T ss_pred HH--HHHhCCCCCcccCHHHHHH
Confidence 44 55655 44332 3333433
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.1e-07 Score=106.55 Aligned_cols=127 Identities=24% Similarity=0.285 Sum_probs=90.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|++.+.++.|+++|+++.++||.....+..+..++|+...-.+ .+...+|.-
T Consensus 181 ~l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l~~~Lgld~~~an-~lei~dg~l------------------------ 235 (322)
T PRK11133 181 PLMPGLTELVLKLQALGWKVAIASGGFTYFADYLRDKLRLDAAVAN-ELEIMDGKL------------------------ 235 (322)
T ss_pred CCChhHHHHHHHHHHcCCEEEEEECCcchhHHHHHHHcCCCeEEEe-EEEEECCEE------------------------
Confidence 4789999999999999999999999998888888888887321100 000001100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee-ccChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~-r~sP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
+ ..+.. -+..+.|.+.++.+.+ .| +.++++|||.||.+|++.|++||
T Consensus 236 -----t-----------------------g~v~g~iv~~k~K~~~L~~la~~lgi~~~qtIaVGDg~NDl~m~~~AGlgi 287 (322)
T PRK11133 236 -----T-----------------------GNVLGDIVDAQYKADTLTRLAQEYEIPLAQTVAIGDGANDLPMIKAAGLGI 287 (322)
T ss_pred -----E-----------------------eEecCccCCcccHHHHHHHHHHHcCCChhhEEEEECCHHHHHHHHHCCCeE
Confidence 0 00110 1234678888887765 33 67999999999999999999999
Q ss_pred EecCCchHHHhhhcceecccchhhHHHH
Q 001304 768 GISGREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
++ ++.+.+++.||+++. +..|..++
T Consensus 288 A~--nAkp~Vk~~Ad~~i~-~~~l~~~l 312 (322)
T PRK11133 288 AY--HAKPKVNEQAQVTIR-HADLMGVL 312 (322)
T ss_pred Ee--CCCHHHHhhCCEEec-CcCHHHHH
Confidence 99 566778889999996 44555444
|
|
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.7e-07 Score=102.29 Aligned_cols=170 Identities=19% Similarity=0.189 Sum_probs=98.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEecC----------------------C
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDG----------------------K 667 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~~----------------------~ 667 (1104)
+.+.++++++|++|+++|++++++||+....+..+++++|+..+ ..++.++...+ .
T Consensus 20 ~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (273)
T PRK00192 20 TYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNYFPFQPDGERLKGDYWVIELGP 99 (273)
T ss_pred CcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccccccCCccccccCCceEEEcCC
Confidence 35667899999999999999999999999999999999997543 11122222111 1
Q ss_pred cHHHHHHHHHHHHHHcc----c----------------------cCCCCCceEEE-E-cchhHHHHHHHHHHHHHhHhhh
Q 001304 668 TEDEVCRSLERVLLTMR----I----------------------TTSEPKDVAFV-V-DGWALEIALKHYRKAFTELAIL 719 (1104)
Q Consensus 668 ~~~~~~~~~~~~~~~~~----~----------------------~~~~~~~~~lv-i-~g~~l~~~~~~~~~~f~~l~~~ 719 (1104)
+.+.....++...+... . .........++ . +.+..+.+.+.+.. + .+...
T Consensus 100 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~ 177 (273)
T PRK00192 100 PYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEPFLWNGSEAAKERFEEALKR-L-GLKVT 177 (273)
T ss_pred CHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCceeecCchHHHHHHHHHHHH-c-CCEEE
Confidence 11222222211111000 0 00000011111 1 22222222222211 1 11111
Q ss_pred ccceeeeccChh-hHHHHHHHHHh----cC-CeEEEEcCCccChhhhhhcCceEEecCCchHHHh----hhc-ceec
Q 001304 720 SRTAICCRVTPS-QKAQLVELLKS----CD-YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA----RAA-DYSI 785 (1104)
Q Consensus 720 ~~~~i~~r~sP~-qK~~iV~~lk~----~~-~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~----~~A-D~vl 785 (1104)
...-+.++.|. .|+..++.+.+ .. +.|+++||+.||++|++.|++|++| +|+..+++ .+| +.+.
T Consensus 178 -~~~~~~ei~~~~~Kg~al~~l~~~~~i~~~~~v~~~GDs~NDi~m~~~ag~~vam-~NA~~~~k~~~~~~a~~~v~ 252 (273)
T PRK00192 178 -RGGRFLHLLGGGDKGKAVRWLKELYRRQDGVETIALGDSPNDLPMLEAADIAVVV-PGPDGPNPPLLPGIADGEFI 252 (273)
T ss_pred -ECCeEEEEeCCCCHHHHHHHHHHHHhccCCceEEEEcCChhhHHHHHhCCeeEEe-CCCCCCCcccCccccCCceE
Confidence 11234455555 78888877764 35 8899999999999999999999999 88887777 555 5655
|
|
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.58 E-value=4.9e-07 Score=95.28 Aligned_cols=122 Identities=23% Similarity=0.250 Sum_probs=86.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.++++|.+|+++||-...-+..+|+.+|+...-.+ .+..-+|
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~~lg~d~~~an-~l~~~dG------------------------- 129 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAERLGIDYVVAN-ELEIDDG------------------------- 129 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHHHhCCchheee-EEEEeCC-------------------------
Confidence 78999999999999999999999999999999999999998543221 0000111
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceE
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
+.+| .++.-.+..+.|...++.+.+ .| +.+.++|||.||.|||+.|+.+|
T Consensus 130 ----~ltG----------------------~v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a~gDs~nDlpml~~ag~~i 183 (212)
T COG0560 130 ----KLTG----------------------RVVGPICDGEGKAKALRELAAELGIPLEETVAYGDSANDLPMLEAAGLPI 183 (212)
T ss_pred ----EEec----------------------eeeeeecCcchHHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHhCCCCe
Confidence 0011 112223344678888866554 34 46999999999999999999999
Q ss_pred EecCCchHHHhhhcceeccc
Q 001304 768 GISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~ 787 (1104)
++... ....+.|+..+..
T Consensus 184 a~n~~--~~l~~~a~~~~~~ 201 (212)
T COG0560 184 AVNPK--PKLRALADVRIWP 201 (212)
T ss_pred EeCcC--HHHHHHHHHhcCh
Confidence 99333 2345566654443
|
|
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=98.53 E-value=8.4e-07 Score=97.01 Aligned_cols=169 Identities=17% Similarity=0.194 Sum_probs=102.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC----CCeEEEecCCc-HHHHH----------HHH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSIDGKT-EDEVC----------RSL 676 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~----~~~~~~~~~~~-~~~~~----------~~~ 676 (1104)
.+..+.+.+++++++++|+.++++||+....+..+.++.++..++. ++..+...+.. .+... ..+
T Consensus 20 ~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (249)
T TIGR01485 20 NQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAEVPDQHWAEYLSEKWQRDIV 99 (249)
T ss_pred hHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCCcCCHHHHHHHhcccCHHHH
Confidence 4567889999999999999999999999999999999999765521 22233333311 11110 001
Q ss_pred HHHHHHccc---c---CCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhc----cceeeeccChh--hHHHHHHHHHhc-
Q 001304 677 ERVLLTMRI---T---TSEPKDVAFVVDGWALEIALKHYRKAFTELAILS----RTAICCRVTPS--QKAQLVELLKSC- 743 (1104)
Q Consensus 677 ~~~~~~~~~---~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~----~~~i~~r~sP~--qK~~iV~~lk~~- 743 (1104)
......+.. . .....+..+..+.+......+.+.+.+....... ...-+.++.|. .|+..++.+.+.
T Consensus 100 ~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~ 179 (249)
T TIGR01485 100 VAITDKFEELKPQPDLEQRPHKVSFFLDPEAAPEVIKQLTEMLKETGLDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL 179 (249)
T ss_pred HHHHhcCcccccCCccccCCeeEEEEechhhhhHHHHHHHHHHHhcCCCEEEEEECCceEEEEeCCCChHHHHHHHHHHc
Confidence 111111110 0 1112233444443333333333344333211111 12234467775 799999988762
Q ss_pred ---CCeEEEEcCCccChhhhhh-cCceEEecCCchHHHhhhc
Q 001304 744 ---DYRTLAIGDGGNDVRMIQK-ADIGVGISGREGLQAARAA 781 (1104)
Q Consensus 744 ---~~~v~~iGDG~ND~~ml~~-AdvGIam~g~~~~~a~~~A 781 (1104)
...|+++||+.||++|++. ++.||+| +|+..+++..+
T Consensus 180 ~i~~~~~i~~GD~~ND~~ml~~~~~~~va~-~na~~~~k~~~ 220 (249)
T TIGR01485 180 AMEPSQTLVCGDSGNDIELFEIGSVRGVIV-SNAQEELLQWY 220 (249)
T ss_pred CCCccCEEEEECChhHHHHHHccCCcEEEE-CCCHHHHHHHH
Confidence 4679999999999999998 7799999 88877777643
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.51 E-value=4.5e-07 Score=91.66 Aligned_cols=99 Identities=21% Similarity=0.285 Sum_probs=75.8
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
..|+.|+++|+++.++|+.+...+....+.+|+..- . .+
T Consensus 41 ~~~~~L~~~Gi~laIiT~k~~~~~~~~l~~lgi~~~------f--~~--------------------------------- 79 (169)
T TIGR02726 41 MGVIVLQLCGIDVAIITSKKSGAVRHRAEELKIKRF------H--EG--------------------------------- 79 (169)
T ss_pred HHHHHHHHCCCEEEEEECCCcHHHHHHHHHCCCcEE------E--ec---------------------------------
Confidence 589999999999999999999999999999998311 0 00
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 779 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~ 779 (1104)
+ .=.|+--..+++.++-..+.+++|||+.||++|++.|+++++| +++..+++.
T Consensus 80 ------------------------~--kpkp~~~~~~~~~l~~~~~ev~~iGD~~nDi~~~~~ag~~~am-~nA~~~lk~ 132 (169)
T TIGR02726 80 ------------------------I--KKKTEPYAQMLEEMNISDAEVCYVGDDLVDLSMMKRVGLAVAV-GDAVADVKE 132 (169)
T ss_pred ------------------------C--CCCHHHHHHHHHHcCcCHHHEEEECCCHHHHHHHHHCCCeEEC-cCchHHHHH
Confidence 0 0012222233333332346799999999999999999999999 888888999
Q ss_pred hcceecc
Q 001304 780 AADYSIG 786 (1104)
Q Consensus 780 ~AD~vl~ 786 (1104)
.||++..
T Consensus 133 ~A~~I~~ 139 (169)
T TIGR02726 133 AAAYVTT 139 (169)
T ss_pred hCCEEcC
Confidence 9999875
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.3e-06 Score=101.81 Aligned_cols=163 Identities=18% Similarity=0.207 Sum_probs=101.6
Q ss_pred hHHHH-HHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC----CCeEEEecCCc-HHHHH-HHH---------HHHHH
Q 001304 618 VPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSIDGKT-EDEVC-RSL---------ERVLL 681 (1104)
Q Consensus 618 ~~~~I-~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~----~~~~~~~~~~~-~~~~~-~~~---------~~~~~ 681 (1104)
..+++ +++++.|+.++++|||.+..+..+.++.++..++. ++..+...+.- .+... ..+ .....
T Consensus 33 ~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~~~~~~~~d~~w~~~l~~~w~~~~v~~~~~ 112 (413)
T PLN02382 33 RFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIAYGESMVPDHGWVEYLNKKWDREIVVEETS 112 (413)
T ss_pred HHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEEeCCCCccChhHHHHHhccCChhhHHHHHh
Confidence 44455 88899999999999999999999999999877742 12222222111 11111 111 11111
Q ss_pred Hcc-c--c---CCCCCceEEEEcchhHHHHHHHHHHHHHhH----hhhccceeeeccChh--hHHHHHHHHHhc----C-
Q 001304 682 TMR-I--T---TSEPKDVAFVVDGWALEIALKHYRKAFTEL----AILSRTAICCRVTPS--QKAQLVELLKSC----D- 744 (1104)
Q Consensus 682 ~~~-~--~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l----~~~~~~~i~~r~sP~--qK~~iV~~lk~~----~- 744 (1104)
.+. . . .+...+..+..+.+....+.+.+.+.|... ........+.++.|. .|+..++.|.+. |
T Consensus 113 ~~~~l~~q~~~~~~~~Ki~~~~~~~~~~~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi 192 (413)
T PLN02382 113 KFPELKLQPETEQRPHKVSFYVDKKKAQEVIKELSERLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGK 192 (413)
T ss_pred cCCCcccCCcccCCCeEEEEEechHHhHHHHHHHHHHHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCC
Confidence 111 0 0 111223445555544555555555555321 111223346788887 599999988653 3
Q ss_pred --CeEEEEcCCccChhhhhhcC-ceEEecCCchHHHhhhc
Q 001304 745 --YRTLAIGDGGNDVRMIQKAD-IGVGISGREGLQAARAA 781 (1104)
Q Consensus 745 --~~v~~iGDG~ND~~ml~~Ad-vGIam~g~~~~~a~~~A 781 (1104)
..++++||+.||++||+.|+ .||+| ||+..++++.+
T Consensus 193 ~~~~~iafGDs~NDleMl~~ag~~gvam-~NA~~elk~~a 231 (413)
T PLN02382 193 APVNTLVCGDSGNDAELFSVPDVYGVMV-SNAQEELLQWY 231 (413)
T ss_pred ChhcEEEEeCCHHHHHHHhcCCCCEEEE-cCCcHHHHHHH
Confidence 57999999999999999999 69999 88888888743
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=98.45 E-value=1.5e-06 Score=94.33 Aligned_cols=162 Identities=19% Similarity=0.271 Sum_probs=95.1
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH--------HHH-HH---------HHHHHHH
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE--------DEV-CR---------SLERVLL 681 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~--------~~~-~~---------~~~~~~~ 681 (1104)
++++ ++++|++++++|||....+..+...+++..++ .++..+|... +.. .. .+.....
T Consensus 22 ~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~---~~I~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (236)
T TIGR02471 22 ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPD---VLIARVGTEIYYGPELQPDRFWQKHIDHDWRRQAVVEALA 97 (236)
T ss_pred HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCC---EEEECCCceEEeCCCCCCChhHHHHHhcCCCHHHHHHHHh
Confidence 5666 69999999999999999999999999875332 1233333221 110 00 1122222
Q ss_pred Hcc---ccCCC---CCceEEEEcch---hHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh-cC---Ce
Q 001304 682 TMR---ITTSE---PKDVAFVVDGW---ALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-CD---YR 746 (1104)
Q Consensus 682 ~~~---~~~~~---~~~~~lvi~g~---~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~~---~~ 746 (1104)
... .+... ..+..+..+.+ .++.+.+.+.+............-+.++.|. .|+..++.+.+ .| ..
T Consensus 98 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ei~~~~~~K~~al~~l~~~~g~~~~~ 177 (236)
T TIGR02471 98 DIPGLTLQDDQEQGPFKISYLLDPEGEPILPQIRQRLRQQSQAAKVILSCGWFLDVLPLRASKGLALRYLSYRWGLPLEQ 177 (236)
T ss_pred cCCCcEeCChhcCCCeeEEEEECcccchHHHHHHHHHHhccCCEEEEEECCceEEEeeCCCChHHHHHHHHHHhCCCHHH
Confidence 111 11111 12333443442 2222222222211111001111112367776 79999998875 33 46
Q ss_pred EEEEcCCccChhhhhhcCceEEecCCchHHHhhhcc----eecc
Q 001304 747 TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAAD----YSIG 786 (1104)
Q Consensus 747 v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD----~vl~ 786 (1104)
++++||+.||.+|++.|++||+| +++..++++.|| ++..
T Consensus 178 ~i~~GD~~nD~~ml~~~~~~iav-~na~~~~k~~a~~~~~~v~~ 220 (236)
T TIGR02471 178 ILVAGDSGNDEEMLRGLTLGVVV-GNHDPELEGLRHQQRIYFAN 220 (236)
T ss_pred EEEEcCCccHHHHHcCCCcEEEE-cCCcHHHHHhhcCCcEEEcC
Confidence 99999999999999999999999 888888999999 6554
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=3.7e-06 Score=100.36 Aligned_cols=158 Identities=15% Similarity=0.168 Sum_probs=91.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeE----------------------EEecCCcH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQL----------------------LSIDGKTE 669 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~----------------------~~~~~~~~ 669 (1104)
.-+.+.++|+.|+++||.++++||+....+..+++++|+..+ ..++.. +.-.+.+.
T Consensus 434 i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~~~~~~~~~~~~~~~~iI~~~~l~~ 513 (694)
T PRK14502 434 SYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKDYFRLPFAYDRVAGNYLVIELGMAY 513 (694)
T ss_pred cCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCCcccccccccccCCCeEEEEcCCCH
Confidence 445789999999999999999999999999999999986321 011112 22223333
Q ss_pred HHHHHHHHHHHHHcc-------------cc---CC---------------------CCCceEEEEcc--hhHHHHHHHHH
Q 001304 670 DEVCRSLERVLLTMR-------------IT---TS---------------------EPKDVAFVVDG--WALEIALKHYR 710 (1104)
Q Consensus 670 ~~~~~~~~~~~~~~~-------------~~---~~---------------------~~~~~~lvi~g--~~l~~~~~~~~ 710 (1104)
+.+.+.++...+... .. +. ......+...| +.++.+.+.++
T Consensus 514 e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a~~Re~seKIl~~gd~e~Leel~~~L~ 593 (694)
T PRK14502 514 KDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELAKQREYSETVHIEGDKRSTNIVLNHIQ 593 (694)
T ss_pred HHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHHhhccCceeEEEcCCHHHHHHHHHHHH
Confidence 344433333222110 00 00 00001222222 23333333333
Q ss_pred HHHHhHhhhccceeeeccCh-hhHHHHHHHHHhc----CCeEEEE--cCCccChhhhhhcCceEEecCCch
Q 001304 711 KAFTELAILSRTAICCRVTP-SQKAQLVELLKSC----DYRTLAI--GDGGNDVRMIQKADIGVGISGREG 774 (1104)
Q Consensus 711 ~~f~~l~~~~~~~i~~r~sP-~qK~~iV~~lk~~----~~~v~~i--GDG~ND~~ml~~AdvGIam~g~~~ 774 (1104)
++ .+... ...-|..+.+ .+|+..++.|.+. ...++++ |||.||++||+.||+||+|.+..+
T Consensus 594 ~~--~l~v~-~g~rfleI~~gvdKG~AL~~L~e~~gI~~~eViafalGDs~NDisMLe~Ag~gVAM~~~~~ 661 (694)
T PRK14502 594 QS--GLEYS-FGGRFYEVTGGNDKGKAIKILNELFRLNFGNIHTFGLGDSENDYSMLETVDSPILVQRPGN 661 (694)
T ss_pred Hc--CcEEE-ECCEEEEeCCCCCHHHHHHHHHHHhCCCccceEEEEcCCcHhhHHHHHhCCceEEEcCCCC
Confidence 22 11111 1334555664 3799999988763 2345556 999999999999999999955544
|
|
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.4e-06 Score=87.46 Aligned_cols=95 Identities=20% Similarity=0.180 Sum_probs=72.1
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+|+.|+++|+++.++||++...+..+++..|+... +++
T Consensus 36 ~i~~Lk~~G~~i~IvTn~~~~~~~~~l~~~gi~~~--------~~~---------------------------------- 73 (154)
T TIGR01670 36 GIRCALKSGIEVAIITGRKAKLVEDRCKTLGITHL--------YQG---------------------------------- 73 (154)
T ss_pred HHHHHHHCCCEEEEEECCCCHHHHHHHHHcCCCEE--------Eec----------------------------------
Confidence 99999999999999999999999999999997210 000
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHH-h---cCCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-S---CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk-~---~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
...|...++.+. + ..+.++++||+.||++|++.|++++++ .+....
T Consensus 74 -----------------------------~~~k~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag~~~~v-~~~~~~ 123 (154)
T TIGR01670 74 -----------------------------QSNKLIAFSDILEKLALAPENVAYIGDDLIDWPVMEKVGLSVAV-ADAHPL 123 (154)
T ss_pred -----------------------------ccchHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEec-CCcCHH
Confidence 012343333332 2 346799999999999999999999999 444455
Q ss_pred Hhhhcceeccc
Q 001304 777 AARAADYSIGK 787 (1104)
Q Consensus 777 a~~~AD~vl~~ 787 (1104)
.+..||+++..
T Consensus 124 ~~~~a~~i~~~ 134 (154)
T TIGR01670 124 LIPRADYVTRI 134 (154)
T ss_pred HHHhCCEEecC
Confidence 66789998864
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.4e-06 Score=93.44 Aligned_cols=124 Identities=23% Similarity=0.328 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++++.++.|+++|+++.++||.....+..+...+|+..--.. .+..++..
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~~i~~~~~~--~~~~~~~~------------------------ 138 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKDKLGLDAAFAN--RLEVEDGK------------------------ 138 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEee--EEEEECCE------------------------
Confidence 5899999999999999999999999999999999999988431110 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-cChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
++ ..+..+ ..+..|..+++.+.+ . .+.++++||+.||++|.+.|++++
T Consensus 139 ----~~-----------------------~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Di~aa~~ag~~i 191 (219)
T TIGR00338 139 ----LT-----------------------GLVEGPIVDASYKGKTLLILLRKEGISPENTVAVGDGANDLSMIKAAGLGI 191 (219)
T ss_pred ----EE-----------------------EEecCcccCCcccHHHHHHHHHHcCCCHHHEEEEECCHHHHHHHHhCCCeE
Confidence 00 001111 122346666665543 2 246999999999999999999999
Q ss_pred EecCCchHHHhhhcceecccchhh
Q 001304 768 GISGREGLQAARAADYSIGKFRFL 791 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~f~~l 791 (1104)
++.+.+ .+.++||++|.+.++-
T Consensus 192 ~~~~~~--~~~~~a~~~i~~~~~~ 213 (219)
T TIGR00338 192 AFNAKP--KLQQKADICINKKDLT 213 (219)
T ss_pred EeCCCH--HHHHhchhccCCCCHH
Confidence 995433 3556999999976643
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=98.37 E-value=5e-06 Score=89.02 Aligned_cols=43 Identities=9% Similarity=0.071 Sum_probs=38.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.+..-+++.++|++|+++|++++++||+....+..+..++|+.
T Consensus 13 ~~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 13 PGYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVE 55 (225)
T ss_pred CCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCC
Confidence 3556678999999999999999999999999999999999974
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.5e-06 Score=88.35 Aligned_cols=147 Identities=19% Similarity=0.233 Sum_probs=86.5
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC---------------------cHHHHHH
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------------------TEDEVCR 674 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~---------------------~~~~~~~ 674 (1104)
+.++++|+.|+++|++++++||+....+..+.+.+|+... .+++.||. +.+.+.+
T Consensus 19 ~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~----~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (221)
T TIGR02463 19 QPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGD----PYIAENGAAIHLEELWREEPGYPRIILGISYGIIRL 94 (221)
T ss_pred HHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCC----cEEEeCCcEEEcCcccccCCCceEEecCCCHHHHHH
Confidence 3489999999999999999999999999999999997411 12222221 1122222
Q ss_pred HHHHHHHHccc----c----------------------CCCCCceEEEE--cchhHHHHHHHHHHHHHhHhhhccceeee
Q 001304 675 SLERVLLTMRI----T----------------------TSEPKDVAFVV--DGWALEIALKHYRKAFTELAILSRTAICC 726 (1104)
Q Consensus 675 ~~~~~~~~~~~----~----------------------~~~~~~~~lvi--~g~~l~~~~~~~~~~f~~l~~~~~~~i~~ 726 (1104)
.++...+.... . ........+.. +.+.++.+.+.+.+ . .+.... ...+.
T Consensus 95 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~-~~~~~ 171 (221)
T TIGR02463 95 VLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRFTALLAD-L-GLAIVQ-GNRFS 171 (221)
T ss_pred HHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHHHHHHHH-c-CCeEEe-cCCee
Confidence 22211111000 0 00011122222 22333333222211 1 121111 23456
Q ss_pred ccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEe
Q 001304 727 RVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 727 r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
++.|. +|+..++.+.+ ..+.|+++||+.||++||+.|+.|||+
T Consensus 172 ei~~~~~~Kg~al~~l~~~lgi~~~~vi~~GD~~NDi~ml~~ag~~va~ 220 (221)
T TIGR02463 172 HVLGASSSKGKAANWLKATYNQPDVKTLGLGDGPNDLPLLEVADYAVVI 220 (221)
T ss_pred EEecCCCCHHHHHHHHHHHhCCCCCcEEEECCCHHHHHHHHhCCceEEe
Confidence 77776 69888887754 246799999999999999999999987
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.31 E-value=5.2e-06 Score=91.25 Aligned_cols=172 Identities=17% Similarity=0.225 Sum_probs=98.3
Q ss_pred cCCCChHHHHHHHHH-cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEE-ecCC-----cHHHHHHHHHHHHHH-cc
Q 001304 613 RLQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGK-----TEDEVCRSLERVLLT-MR 684 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~-aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~-~~ 684 (1104)
.+.+++.++|+.|++ .|++++++|||....+..+....++.-...++..+. .++. -..+....+...+.. ..
T Consensus 36 ~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~l~~~~~ 115 (266)
T PRK10187 36 VVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKTHIVHLPDAIARDISVQLHTALA 115 (266)
T ss_pred cCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCeeeccCChhHHHHHHHHHHHHhc
Confidence 456789999999998 899999999999999988887666321111111111 1111 011111222222222 10
Q ss_pred ---ccCCCCCceEEEEcch-------hHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeEE
Q 001304 685 ---ITTSEPKDVAFVVDGW-------ALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTL 748 (1104)
Q Consensus 685 ---~~~~~~~~~~lvi~g~-------~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~ 748 (1104)
...-+.+..+++.... .+..+.+.+.+.+..+ .+....-+.++.|. +|+..++.+.+ . ...++
T Consensus 116 ~~pg~~ve~k~~~~~~h~r~~~~~~~~~~~l~~~i~~~~~~~-~~~~g~~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~ 194 (266)
T PRK10187 116 QLPGAELEAKGMAFALHYRQAPQHEDALLALAQRITQIWPQL-ALQPGKCVVEIKPRGTNKGEAIAAFMQEAPFAGRTPV 194 (266)
T ss_pred cCCCcEEEeCCcEEEEECCCCCccHHHHHHHHHHHHhhCCce-EEeCCCEEEEeeCCCCCHHHHHHHHHHhcCCCCCeEE
Confidence 1111223333333221 1111111222222111 11234455677776 79999887765 3 36799
Q ss_pred EEcCCccChhhhhhc----CceEEecCCchHHHhhhcceecccchh
Q 001304 749 AIGDGGNDVRMIQKA----DIGVGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 749 ~iGDG~ND~~ml~~A----dvGIam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++||+.||.+|++.+ +.||+| |+.. ..|++.|.+-.-
T Consensus 195 ~~GD~~nD~~mf~~~~~~~g~~vav-g~a~----~~A~~~l~~~~~ 235 (266)
T PRK10187 195 FVGDDLTDEAGFAVVNRLGGISVKV-GTGA----TQASWRLAGVPD 235 (266)
T ss_pred EEcCCccHHHHHHHHHhcCCeEEEE-CCCC----CcCeEeCCCHHH
Confidence 999999999999999 999999 7653 457888876543
|
|
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=3e-06 Score=87.69 Aligned_cols=95 Identities=21% Similarity=0.197 Sum_probs=72.3
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
.+|+.|+++|+++.++||+....+..+++++|+... +.|
T Consensus 55 ~~i~~L~~~Gi~v~I~T~~~~~~v~~~l~~lgl~~~--------f~g--------------------------------- 93 (183)
T PRK09484 55 YGIRCLLTSGIEVAIITGRKSKLVEDRMTTLGITHL--------YQG--------------------------------- 93 (183)
T ss_pred HHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCcee--------ecC---------------------------------
Confidence 689999999999999999999999999999997311 000
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-Hhc---CCeEEEEcCCccChhhhhhcCceEEecCCchH
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSC---DYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 775 (1104)
.+.|...++.+ ++. .+.+++|||+.||++|++.|++++++ ++...
T Consensus 94 ------------------------------~~~k~~~l~~~~~~~gl~~~ev~~VGDs~~D~~~a~~aG~~~~v-~~~~~ 142 (183)
T PRK09484 94 ------------------------------QSNKLIAFSDLLEKLAIAPEQVAYIGDDLIDWPVMEKVGLSVAV-ADAHP 142 (183)
T ss_pred ------------------------------CCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCeEec-CChhH
Confidence 12243433333 222 35799999999999999999999998 55555
Q ss_pred HHhhhcceecc
Q 001304 776 QAARAADYSIG 786 (1104)
Q Consensus 776 ~a~~~AD~vl~ 786 (1104)
..+..||+++.
T Consensus 143 ~~~~~a~~v~~ 153 (183)
T PRK09484 143 LLLPRADYVTR 153 (183)
T ss_pred HHHHhCCEEec
Confidence 55668999985
|
|
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.6e-06 Score=85.30 Aligned_cols=129 Identities=21% Similarity=0.305 Sum_probs=85.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++++.++.|++.|.+|.++||--..-+..+|.++||...+-.-+.+.++.
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va~~Lgi~~~n~yAN~l~fd~-------------------------- 141 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVAEQLGIPKSNIYANELLFDK-------------------------- 141 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHhCCcHhhhhhheeeecc--------------------------
Confidence 367999999999999999999999999999999999999954321100111110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhc--CCeEEEEcCCccChhhhhhcCceEEec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~--~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
+|+-+. |.. . -.-+....|+++++.+++. .+.++|||||+||.+|+..||.=||..
T Consensus 142 -----~Gk~~g---------fd~------~--~ptsdsggKa~~i~~lrk~~~~~~~~mvGDGatDlea~~pa~afi~~~ 199 (227)
T KOG1615|consen 142 -----DGKYLG---------FDT------N--EPTSDSGGKAEVIALLRKNYNYKTIVMVGDGATDLEAMPPADAFIGFG 199 (227)
T ss_pred -----CCcccc---------ccc------C--CccccCCccHHHHHHHHhCCChheeEEecCCccccccCCchhhhhccC
Confidence 000000 000 0 0001222699999999873 367899999999999999988777774
Q ss_pred CCchH-HHhhhcceecccch
Q 001304 771 GREGL-QAARAADYSIGKFR 789 (1104)
Q Consensus 771 g~~~~-~a~~~AD~vl~~f~ 789 (1104)
|+--. +++..|+.-+.+|.
T Consensus 200 g~~~r~~vk~nak~~~~~f~ 219 (227)
T KOG1615|consen 200 GNVIREGVKANAKWYVTDFY 219 (227)
T ss_pred CceEcHhhHhccHHHHHHHH
Confidence 54322 24446665555543
|
|
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=5.4e-06 Score=90.39 Aligned_cols=59 Identities=22% Similarity=0.260 Sum_probs=47.1
Q ss_pred eeeccChh--hHHHHHHHHHhcCCeEEEEcC----CccChhhhhhc-CceEEecCCchHHHhhhcce
Q 001304 724 ICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKA-DIGVGISGREGLQAARAADY 783 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~~~~v~~iGD----G~ND~~ml~~A-dvGIam~g~~~~~a~~~AD~ 783 (1104)
.+.+++|. +|+..++.|.+..+.|+++|| |.||++||+.| -.|+++ +|+...++..+.+
T Consensus 178 ~~leI~~~gvsKg~al~~L~~~~~eviafGD~~~~~~NDieMl~~~~~~g~~v-~n~~~~~~~~~~~ 243 (247)
T PTZ00174 178 ISFDVFPKGWDKTYCLRHLENDFKEIHFFGDKTFEGGNDYEIYNDPRTIGHSV-KNPEDTIKILKEL 243 (247)
T ss_pred eEEEeeeCCCcHHHHHHHHHhhhhhEEEEcccCCCCCCcHhhhhcCCCceEEe-CCHHHHHHHHHHH
Confidence 46688886 799999999887789999999 99999999976 577777 4655555555543
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.13 E-value=2.1e-05 Score=83.21 Aligned_cols=124 Identities=23% Similarity=0.231 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|+++++++.|+++ +++.++||.....+..+...+|+...-.. .+..++..
T Consensus 68 ~~~pg~~e~L~~L~~~-~~~~IvS~~~~~~~~~~l~~~gl~~~f~~--~~~~~~~~------------------------ 120 (205)
T PRK13582 68 DPLPGAVEFLDWLRER-FQVVILSDTFYEFAGPLMRQLGWPTLFCH--SLEVDEDG------------------------ 120 (205)
T ss_pred CCCCCHHHHHHHHHhc-CCEEEEeCCcHHHHHHHHHHcCCchhhcc--eEEECCCC------------------------
Confidence 3689999999999999 99999999999999999999998321100 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-cChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g 771 (1104)
..+... ..|..|...++.++..+..++|+|||.||++|.+.|++|+....
T Consensus 121 -----------------------------~i~~~~~~~p~~k~~~l~~~~~~~~~~v~iGDs~~D~~~~~aa~~~v~~~~ 171 (205)
T PRK13582 121 -----------------------------MITGYDLRQPDGKRQAVKALKSLGYRVIAAGDSYNDTTMLGEADAGILFRP 171 (205)
T ss_pred -----------------------------eEECccccccchHHHHHHHHHHhCCeEEEEeCCHHHHHHHHhCCCCEEECC
Confidence 000011 13667888888888778899999999999999999999998733
Q ss_pred CchHHHhhhcce-ecccchhhHH
Q 001304 772 REGLQAARAADY-SIGKFRFLKR 793 (1104)
Q Consensus 772 ~~~~~a~~~AD~-vl~~f~~l~~ 793 (1104)
.+ ......+++ ++.++..+..
T Consensus 172 ~~-~~~~~~~~~~~~~~~~el~~ 193 (205)
T PRK13582 172 PA-NVIAEFPQFPAVHTYDELLA 193 (205)
T ss_pred CH-HHHHhCCcccccCCHHHHHH
Confidence 22 212234565 6666655443
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=98.09 E-value=6.2e-05 Score=81.28 Aligned_cols=43 Identities=5% Similarity=0.036 Sum_probs=38.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
+...+.+.++|++|+++||.++++||+.......+.+++++..
T Consensus 17 ~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~ 59 (302)
T PRK12702 17 FNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEH 59 (302)
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCC
Confidence 3466779999999999999999999999999999999999743
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=98.08 E-value=1.6e-05 Score=83.94 Aligned_cols=117 Identities=30% Similarity=0.314 Sum_probs=79.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||-....+..++...|+...-.. .+..++..
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~~~g~~~~~~~--~~~~~~~g------------------------ 133 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAEKLNPDYVYSN--ELVFDEKG------------------------ 133 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHhCCCeEEEE--EEEEcCCC------------------------
Confidence 5899999999999999999999999999999999999996321000 11111000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIa 768 (1104)
..+...+....|..|..+++.+.+ . .+.++++||+.||++|++.||++++
T Consensus 134 --------------------------~~~p~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~D~~~a~~ag~~~a 187 (201)
T TIGR01491 134 --------------------------FIQPDGIVRVTFDNKGEAVERLKRELNPSLTETVAVGDSKNDLPMFEVADISIS 187 (201)
T ss_pred --------------------------eEecceeeEEccccHHHHHHHHHHHhCCCHHHEEEEcCCHhHHHHHHhcCCeEE
Confidence 000011122345668777776544 2 3569999999999999999999999
Q ss_pred ecCCchHHHhhhcc
Q 001304 769 ISGREGLQAARAAD 782 (1104)
Q Consensus 769 m~g~~~~~a~~~AD 782 (1104)
+ +..+.....++|
T Consensus 188 ~-~~~~~~~~~a~~ 200 (201)
T TIGR01491 188 L-GDEGHADYLAKD 200 (201)
T ss_pred E-CCCccchhhccc
Confidence 9 443433333444
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=98.06 E-value=8.9e-06 Score=86.07 Aligned_cols=157 Identities=23% Similarity=0.261 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH-----HHHHHHH---HHHHHHcc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE-----DEVCRSL---ERVLLTMR 684 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~-----~~~~~~~---~~~~~~~~ 684 (1104)
++.+++.++|++|++.|++++++||+....+..+..+.+..--..++..+...+... +.....+ ++....+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (204)
T TIGR01484 17 ELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEILYIEPSDVFEEILGIKEEIGAELK 96 (204)
T ss_pred cCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEEEEEcccccHHHHHHhhhhcCceee
Confidence 477889999999999999999999999999999988744211111122332222111 1111111 11000000
Q ss_pred c-------cCCCCCceEEE--Ecch-hHHHHHHHHHHHHHh-------HhhhccceeeeccChh--hHHHHHHHHHhc-C
Q 001304 685 I-------TTSEPKDVAFV--VDGW-ALEIALKHYRKAFTE-------LAILSRTAICCRVTPS--QKAQLVELLKSC-D 744 (1104)
Q Consensus 685 ~-------~~~~~~~~~lv--i~g~-~l~~~~~~~~~~f~~-------l~~~~~~~i~~r~sP~--qK~~iV~~lk~~-~ 744 (1104)
. ...+.+...+. ..+. ..........+.... +.......-+.++.|. +|+..++.+.+. +
T Consensus 97 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ev~p~~~~K~~~~~~~~~~~~ 176 (204)
T TIGR01484 97 SLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIGRNDLELEAIYVGKTDLEVLPAGVDKGSALQALLKELN 176 (204)
T ss_pred eeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhccccCcEEEEEecCCEEEEecCCCChHHHHHHHHHHhC
Confidence 0 00011112221 2111 001111111111111 1111123345677885 799999987652 2
Q ss_pred ---CeEEEEcCCccChhhhhhcCceEEe
Q 001304 745 ---YRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 745 ---~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
..++++||+.||.+|++.+++||+|
T Consensus 177 ~~~~~~~~~GD~~nD~~~~~~~~~~vam 204 (204)
T TIGR01484 177 GKRDEILAFGDSGNDEEMFEVAGLAVAV 204 (204)
T ss_pred CCHHHEEEEcCCHHHHHHHHHcCCceEC
Confidence 5699999999999999999999997
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=97.92 E-value=1.9e-05 Score=82.49 Aligned_cols=92 Identities=25% Similarity=0.287 Sum_probs=67.8
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEE
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 695 (1104)
+++++.|+.++++|++++++||.....+..+++.+|+.... ++..+. .
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~----v~~~~~-~--------------------------- 139 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDN----VIGNEL-F--------------------------- 139 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGG----EEEEEE-E---------------------------
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceE----EEEEee-e---------------------------
Confidence 66669999999999999999999999999999999985321 111000 0
Q ss_pred EEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh-h--HHHHHHHH------HhcCCeEEEEcCCccChhhhh
Q 001304 696 VVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS-Q--KAQLVELL------KSCDYRTLAIGDGGNDVRMIQ 761 (1104)
Q Consensus 696 vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~-q--K~~iV~~l------k~~~~~v~~iGDG~ND~~ml~ 761 (1104)
+. .......++++. + |...++.+ +.....++++|||.||.+|||
T Consensus 140 --~~--------------------~~~~~~~~~~~~~~~~K~~~l~~~~~~~~~~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 140 --DN--------------------GGGIFTGRITGSNCGGKAEALKELYIRDEEDIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp --CT--------------------TCCEEEEEEEEEEESHHHHHHHHHHHHHHHTHTCCEEEEEESSGGGHHHHH
T ss_pred --ec--------------------ccceeeeeECCCCCCcHHHHHHHHHHHhhcCCCCCeEEEEECCHHHHHHhC
Confidence 00 012334555555 4 99999998 335688999999999999996
|
|
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.89 E-value=2.2e-05 Score=75.11 Aligned_cols=96 Identities=22% Similarity=0.213 Sum_probs=75.8
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
..|+.+.++||++.++||++...+..=|+++||-. ...
T Consensus 42 ~Gik~l~~~Gi~vAIITGr~s~ive~Ra~~LGI~~--------~~q---------------------------------- 79 (170)
T COG1778 42 HGIKLLLKSGIKVAIITGRDSPIVEKRAKDLGIKH--------LYQ---------------------------------- 79 (170)
T ss_pred HHHHHHHHcCCeEEEEeCCCCHHHHHHHHHcCCce--------eee----------------------------------
Confidence 47999999999999999999999999999999821 111
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchH
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 775 (1104)
--++|....+.|.+ .-+.|+.+||-.||.|+|+..+.+++. ..+..
T Consensus 80 -----------------------------G~~dK~~a~~~L~~~~~l~~e~~ayiGDD~~Dlpvm~~vGls~a~-~dAh~ 129 (170)
T COG1778 80 -----------------------------GISDKLAAFEELLKKLNLDPEEVAYVGDDLVDLPVMEKVGLSVAV-ADAHP 129 (170)
T ss_pred -----------------------------chHhHHHHHHHHHHHhCCCHHHhhhhcCccccHHHHHHcCCcccc-cccCH
Confidence 11245444444433 236799999999999999999999999 67777
Q ss_pred HHhhhcceeccc
Q 001304 776 QAARAADYSIGK 787 (1104)
Q Consensus 776 ~a~~~AD~vl~~ 787 (1104)
..++.||+|+..
T Consensus 130 ~v~~~a~~Vt~~ 141 (170)
T COG1778 130 LLKQRADYVTSK 141 (170)
T ss_pred HHHHhhHhhhhc
Confidence 888899999863
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=97.89 E-value=6.3e-05 Score=80.87 Aligned_cols=133 Identities=22% Similarity=0.339 Sum_probs=81.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.++++++++.|+++|+++.++||.....+..++..+|+....--...+.++...
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~~~gi~~~~~~~~~~~~~~~g------------------------ 139 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAAILGIPPENIFANQILFGDSG------------------------ 139 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHhCCChhhEEEeEEEEcCCC------------------------
Confidence 47899999999999999999999999999999999999984211000000010000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhc-C-CeEEEEcCCccChhhhhh--cCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC-D-YRTLAIGDGGNDVRMIQK--ADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~-~-~~v~~iGDG~ND~~ml~~--AdvGIa 768 (1104)
.+.|. ..... ...+..|...++.+.+. + +.++++||+.||+.|.+. ++++++
T Consensus 140 ---~~~g~-------------------~~~~~--~~~~~~K~~~i~~~~~~~~~~~~i~iGDs~~Di~aa~~~~~~~~~~ 195 (224)
T PLN02954 140 ---EYAGF-------------------DENEP--TSRSGGKAEAVQHIKKKHGYKTMVMIGDGATDLEARKPGGADLFIG 195 (224)
T ss_pred ---cEECc-------------------cCCCc--ccCCccHHHHHHHHHHHcCCCceEEEeCCHHHHHhhhcCCCCEEEe
Confidence 00000 00000 01123477777766542 2 579999999999999888 455555
Q ss_pred ecCCc-hHHHhhhcceecccchhhHH
Q 001304 769 ISGRE-GLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 769 m~g~~-~~~a~~~AD~vl~~f~~l~~ 793 (1104)
..+.. .......+|+++.+++.+..
T Consensus 196 ~~~~~~~~~~~~~~~~~i~~~~el~~ 221 (224)
T PLN02954 196 YGGVQVREAVAAKADWFVTDFQDLIE 221 (224)
T ss_pred cCCCccCHHHHhcCCEEECCHHHHHH
Confidence 42221 12233468999987665543
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=97.89 E-value=6.2e-05 Score=80.21 Aligned_cols=137 Identities=13% Similarity=0.163 Sum_probs=83.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++++++.+.++.|++.|+++.++||.....+..+....+.... +..-+
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~~~~~~-----i~~n~-------------------------- 117 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGGMDFFVYPLLEGIVEKDR-----IYCNE-------------------------- 117 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHhhCCccc-----EEece--------------------------
Confidence 46899999999999999999999999999888888887643211 11000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhcccee-eeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAI-CCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i-~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
+..++..+... +. ..... +..-....|..+++.++.....++|+|||.||.+|.+.||+.++-
T Consensus 118 ---~~~~~~~~~~~-------~p-----~~~~~~~~~~cg~~K~~~l~~~~~~~~~~i~iGDg~~D~~~a~~Ad~~~ar- 181 (214)
T TIGR03333 118 ---ADFSNEYIHID-------WP-----HPCDGTCQNQCGCCKPSLIRKLSEPNDYHIVIGDSVTDVEAAKQSDLCFAR- 181 (214)
T ss_pred ---eEeeCCeeEEe-------CC-----CCCccccccCCCCCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHhCCeeEeh-
Confidence 00001000000 00 00000 000013479999998887777899999999999999999997764
Q ss_pred CCchH--HHhhhcceecccchhhHHHH
Q 001304 771 GREGL--QAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 771 g~~~~--~a~~~AD~vl~~f~~l~~ll 795 (1104)
+.-.. +-...+.+.+.+|..+...+
T Consensus 182 ~~l~~~~~~~~~~~~~~~~f~di~~~l 208 (214)
T TIGR03333 182 DYLLNECEELGLNHAPFQDFYDVRKEL 208 (214)
T ss_pred HHHHHHHHHcCCCccCcCCHHHHHHHH
Confidence 22111 11113444455665555443
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=97.85 E-value=0.00027 Score=89.25 Aligned_cols=173 Identities=18% Similarity=0.171 Sum_probs=97.5
Q ss_pred CCCChHHHHHHHHH-cCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCc-------HHHHHHHHHHHHHHccc
Q 001304 614 LQDGVPETIETLRK-AGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT-------EDEVCRSLERVLLTMRI 685 (1104)
Q Consensus 614 lr~~~~~~I~~l~~-aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 685 (1104)
+.+++.++|+.|.+ .|+.|+++||+............++.--..+|..+...+.. .......+...++.+..
T Consensus 515 ~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG~~i~~~~~~w~~~~~~~~~w~~~v~~il~~~~~ 594 (726)
T PRK14501 515 PDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHGAWSRAPGGEWQLLEPVATEWKDAVRPILEEFVD 594 (726)
T ss_pred CCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCCEEEeCCCCceEECCCcchhHHHHHHHHHHHHHh
Confidence 56788999999999 69999999999999888776554431111122222221111 11112223333332211
Q ss_pred ----cCCCCCceEEEEcc----hhH-HHHHHHHHHHHHhHhh-----hccceeeeccChh--hHHHHHHHHHhc--CCeE
Q 001304 686 ----TTSEPKDVAFVVDG----WAL-EIALKHYRKAFTELAI-----LSRTAICCRVTPS--QKAQLVELLKSC--DYRT 747 (1104)
Q Consensus 686 ----~~~~~~~~~lvi~g----~~l-~~~~~~~~~~f~~l~~-----~~~~~i~~r~sP~--qK~~iV~~lk~~--~~~v 747 (1104)
...+.+...+...- ..+ ....+++.+.+..+.. .....-+.++.|. +|+..++.+.+. ...+
T Consensus 595 ~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~~~~~d~v 674 (726)
T PRK14501 595 RTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLEAGPYDFV 674 (726)
T ss_pred cCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHhcCCCCEE
Confidence 11112223333321 111 1111222222222110 1112334567775 799999988863 3579
Q ss_pred EEEcCCccChhhhhhc---CceEEecCCchHHHhhhcceecccchhh
Q 001304 748 LAIGDGGNDVRMIQKA---DIGVGISGREGLQAARAADYSIGKFRFL 791 (1104)
Q Consensus 748 ~~iGDG~ND~~ml~~A---dvGIam~g~~~~~a~~~AD~vl~~f~~l 791 (1104)
+++||+.||.+|++.+ +.||+| |+. ..+|++.+.+.+..
T Consensus 675 l~~GD~~nDe~Mf~~~~~~~~~v~v-G~~----~s~A~~~l~~~~eV 716 (726)
T PRK14501 675 LAIGDDTTDEDMFRALPETAITVKV-GPG----ESRARYRLPSQREV 716 (726)
T ss_pred EEECCCCChHHHHHhcccCceEEEE-CCC----CCcceEeCCCHHHH
Confidence 9999999999999996 588888 653 35789999865443
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0019 Score=76.53 Aligned_cols=93 Identities=15% Similarity=0.182 Sum_probs=69.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
|+++++.+.+++++++|++++++|+-+...+..+++..|+.+. ++..++.
T Consensus 72 p~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~-----Vigsd~~------------------------- 121 (479)
T PRK08238 72 PYNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDG-----VFASDGT------------------------- 121 (479)
T ss_pred CCChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCE-----EEeCCCc-------------------------
Confidence 4789999999999999999999999999999999999997321 2211110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcC-CeEEEEcCCccChhhhhhcCceEEec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCD-YRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~-~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
.+..|+.|...++. ..+ +.+.++||+.+|.+|++.|+-.+++.
T Consensus 122 ---------------------------------~~~kg~~K~~~l~~--~l~~~~~~yvGDS~~Dlp~~~~A~~av~Vn 165 (479)
T PRK08238 122 ---------------------------------TNLKGAAKAAALVE--AFGERGFDYAGNSAADLPVWAAARRAIVVG 165 (479)
T ss_pred ---------------------------------cccCCchHHHHHHH--HhCccCeeEecCCHHHHHHHHhCCCeEEEC
Confidence 02355566554432 222 23678899999999999999999993
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00017 Score=75.00 Aligned_cols=114 Identities=18% Similarity=0.209 Sum_probs=75.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.. ++. +....+ . .
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--i~~-~~~~~~------------------~-~ 128 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGNDFFIDPVLEGIGEKDVFIE--IYS-NPASFD------------------N-D 128 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHHcCChhheeE--Eec-cCceEC------------------C-C
Confidence 37899999999999999999999999999999999888887332110 110 000000 0 0
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc-ChhhHHHHHHHHHhc-CCeEEEEcCCccChhhhhhcCceEE
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQLVELLKSC-DYRTLAIGDGGNDVRMIQKADIGVG 768 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-sP~qK~~iV~~lk~~-~~~v~~iGDG~ND~~ml~~AdvGIa 768 (1104)
.. +... ..++..|... ....|..+++.++.. ...++++|||.||+.|.++||+-.|
T Consensus 129 g~-~~~~--------------------~~~~~~~~~~~~g~~K~~~~~~~~~~~~~~~i~iGD~~~D~~aa~~~d~~~a 186 (188)
T TIGR01489 129 GR-HIVW--------------------PHHCHGCCSCPCGCCKGKVIHKLSEPKYQHIIYIGDGVTDVCPAKLSDVVFA 186 (188)
T ss_pred Cc-EEEe--------------------cCCCCccCcCCCCCCHHHHHHHHHhhcCceEEEECCCcchhchHhcCCcccc
Confidence 00 0000 0011112211 223589999998876 7889999999999999999987544
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.00017 Score=77.21 Aligned_cols=134 Identities=13% Similarity=0.178 Sum_probs=81.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
+++||+.+.++.|++.|+++.++||-....+..+.+.. +... . ++..+..
T Consensus 74 ~l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~~~-~~~~--~--i~~n~~~------------------------- 123 (219)
T PRK09552 74 EIREGFHEFVQFVKENNIPFYVVSGGMDFFVYPLLQGL-IPKE--Q--IYCNGSD------------------------- 123 (219)
T ss_pred CcCcCHHHHHHHHHHcCCeEEEECCCcHHHHHHHHHHh-CCcC--c--EEEeEEE-------------------------
Confidence 68999999999999999999999999999898888887 5321 1 1110000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceee-e-ccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-C-RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~-~-r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
.+|..+... ....... + ......|..+++.++.....+++||||.||++|.+.||+.++-
T Consensus 124 ----~~~~~~~~~-------------kp~p~~~~~~~~~~~~K~~~l~~~~~~~~~~i~iGDs~~Di~aa~~Ag~~~a~- 185 (219)
T PRK09552 124 ----FSGEYITIT-------------WPHPCDEHCQNHCGCCKPSLIRKLSDTNDFHIVIGDSITDLEAAKQADKVFAR- 185 (219)
T ss_pred ----ecCCeeEEe-------------ccCCccccccccCCCchHHHHHHhccCCCCEEEEeCCHHHHHHHHHCCcceeH-
Confidence 000000000 0000000 0 0001247888888877777899999999999999999997663
Q ss_pred CCchHHHhh--hcceecccchhhHHH
Q 001304 771 GREGLQAAR--AADYSIGKFRFLKRL 794 (1104)
Q Consensus 771 g~~~~~a~~--~AD~vl~~f~~l~~l 794 (1104)
+.-...+.+ .+.+.+.+|..+...
T Consensus 186 ~~l~~~~~~~~~~~~~~~~f~ei~~~ 211 (219)
T PRK09552 186 DFLITKCEELGIPYTPFETFHDVQTE 211 (219)
T ss_pred HHHHHHHHHcCCCccccCCHHHHHHH
Confidence 211111111 355555666655443
|
|
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00016 Score=74.38 Aligned_cols=100 Identities=21% Similarity=0.220 Sum_probs=68.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+++++++.++.+++.|++++++||.....+..++...|+..--.+ .+..++..
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~~~g~~~~~~~--~~~~~~~g------------------------- 126 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAEKLGIDDVFAN--RLEFDDNG------------------------- 126 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCchheee--eEEECCCC-------------------------
Confidence 579999999999999999999999999999999999987421110 01110000
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhc----CCeEEEEcCCccChhhhhhc
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKA 763 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~A 763 (1104)
.+.|.. . .. -...+..|..+++.+.+. .+.++++|||.||.+|++.|
T Consensus 127 --~~~g~~-----------------~--~~--~~~~~~~K~~~l~~~~~~~~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 127 --LLTGPI-----------------E--GQ--VNPEGECKGKVLKELLEESKITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred --EEeCcc-----------------C--Cc--ccCCcchHHHHHHHHHHHhCCCHHHEEEEeCCHHHHHHHhcC
Confidence 000000 0 00 123456799888876653 35799999999999999875
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0002 Score=75.54 Aligned_cols=108 Identities=14% Similarity=0.077 Sum_probs=75.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEE-ecCCcHHHHHHHHHHHHHHccccCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-IDGKTEDEVCRSLERVLLTMRITTSE 689 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1104)
..++.+++.+.++.++++|++++++||.....+..+++.+|+..--.. .+.. -+|
T Consensus 85 ~~~~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~~lg~~~~~~~-~l~~~~~g----------------------- 140 (202)
T TIGR01490 85 ESILYPEARDLIRWHKAEGHTIVLVSASLTILVKPLARILGIDNAIGT-RLEESEDG----------------------- 140 (202)
T ss_pred HHhccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCcceEec-ceEEcCCC-----------------------
Confidence 456899999999999999999999999999999999999998321000 0000 000
Q ss_pred CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCc
Q 001304 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 690 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+|+ ...-.+.++.|...++.+.+ .+ +.++++||+.+|.+|++.|+.
T Consensus 141 ------~~~g~----------------------~~~~~~~g~~K~~~l~~~~~~~~~~~~~~~~~gDs~~D~~~~~~a~~ 192 (202)
T TIGR01490 141 ------IYTGN----------------------IDGNNCKGEGKVHALAELLAEEQIDLKDSYAYGDSISDLPLLSLVGH 192 (202)
T ss_pred ------EEeCC----------------------ccCCCCCChHHHHHHHHHHHHcCCCHHHcEeeeCCcccHHHHHhCCC
Confidence 00010 00012345678777766543 33 368999999999999999999
Q ss_pred eEEec
Q 001304 766 GVGIS 770 (1104)
Q Consensus 766 GIam~ 770 (1104)
++++.
T Consensus 193 ~~~v~ 197 (202)
T TIGR01490 193 PYVVN 197 (202)
T ss_pred cEEeC
Confidence 99883
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >COG0546 Gph Predicted phosphatases [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.00039 Score=74.37 Aligned_cols=119 Identities=24% Similarity=0.243 Sum_probs=85.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
+..+-+++++++..|+++|++..++|++....+..+.+..|+...-..
T Consensus 87 ~~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~~~l~~~gl~~~F~~-------------------------------- 134 (220)
T COG0546 87 ESRLFPGVKELLAALKSAGYKLGIVTNKPERELDILLKALGLADYFDV-------------------------------- 134 (220)
T ss_pred cCccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHhCCccccce--------------------------------
Confidence 567899999999999999999999999999999999999998543211
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcC
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
.++++. .|.....+++.+....+.++||||..+|+.|=+.|+
T Consensus 135 --------------------------------i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs~~Di~aA~~Ag 182 (220)
T COG0546 135 --------------------------------IVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDSLNDILAAKAAG 182 (220)
T ss_pred --------------------------------EEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCCHHHHHHHHHcC
Confidence 111122 333334444444434347999999999999999999
Q ss_pred ---ceEEecCC-chHHHhh-hcceecccchhhHHH
Q 001304 765 ---IGVGISGR-EGLQAAR-AADYSIGKFRFLKRL 794 (1104)
Q Consensus 765 ---vGIam~g~-~~~~a~~-~AD~vl~~f~~l~~l 794 (1104)
|||.. |. ....... .+|+++.+...|...
T Consensus 183 ~~~v~v~~-g~~~~~~l~~~~~d~vi~~~~el~~~ 216 (220)
T COG0546 183 VPAVGVTW-GYNSREELAQAGADVVIDSLAELLAL 216 (220)
T ss_pred CCEEEEEC-CCCCCcchhhcCCCEEECCHHHHHHH
Confidence 55554 43 2233344 689999987766544
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00026 Score=68.85 Aligned_cols=117 Identities=19% Similarity=0.221 Sum_probs=74.9
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCC
Q 001304 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (1104)
Q Consensus 610 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1104)
-..++.+++++.++.|+++|++++++||.....+......+|+...... ++..++....... ..
T Consensus 21 ~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~~~~--------------~~ 84 (139)
T cd01427 21 EELELYPGVKEALKELKEKGIKLALATNKSRREVLELLEELGLDDYFDP--VITSNGAAIYYPK--------------EG 84 (139)
T ss_pred ccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHHHcCCchhhhh--eeccchhhhhccc--------------cc
Confidence 3458899999999999999999999999999999999999987422211 1111111000000 00
Q ss_pred CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhh-cCceEE
Q 001304 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQK-ADIGVG 768 (1104)
Q Consensus 690 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~-AdvGIa 768 (1104)
.........+.+-.|..+..+.+.+....+.++++||+.+|+.|.+. +.-+|+
T Consensus 85 --------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~~~d~~~~~~~g~~~i~ 138 (139)
T cd01427 85 --------------------------LFLGGGPFDIGKPNPDKLLAALKLLGVDPEEVLMVGDSLNDIEMAKAAGGLGVA 138 (139)
T ss_pred --------------------------ccccccccccCCCCHHHHHHHHHHcCCChhhEEEeCCCHHHHHHHHHcCCceee
Confidence 00001122333445555566666665556789999999999999998 444443
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00042 Score=75.33 Aligned_cols=154 Identities=19% Similarity=0.300 Sum_probs=90.6
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC----CCeEEEe--cCCcHHHHH---------HHHHHHHHHcc--
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSI--DGKTEDEVC---------RSLERVLLTMR-- 684 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~----~~~~~~~--~~~~~~~~~---------~~~~~~~~~~~-- 684 (1104)
++...+.++.++++||++...+..+.++.++..|+- .+..++. +.....+-. ..+++.+..+.
T Consensus 28 l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l 107 (247)
T PF05116_consen 28 LEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGENWQPDEEWQAHIDERWDRERVEEILAELPGL 107 (247)
T ss_dssp HHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESSTTEE-HHHHHHHHTT--HHHHHHHHHCHCCE
T ss_pred HHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcCCCcChHHHHHHHHhcCChHHHHHHHHHhhCc
Confidence 333457889999999999999999999999865531 1112222 111111111 11222332221
Q ss_pred -c---cCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhc----cceeeeccChh--hHHHHHHHHHhc----CCeEEEE
Q 001304 685 -I---TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS----RTAICCRVTPS--QKAQLVELLKSC----DYRTLAI 750 (1104)
Q Consensus 685 -~---~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~----~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~i 750 (1104)
. ......+.+..++.......++.+.+.+..-...+ +..-+.++.|. +|...|+.+++. .+.|+++
T Consensus 108 ~~q~~~~q~~~k~sy~~~~~~~~~~~~~i~~~l~~~~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~a 187 (247)
T PF05116_consen 108 RPQPESEQRPFKISYYVDPDDSADILEEIRARLRQRGLRVNVIYSNGRDLDILPKGASKGAALRYLMERWGIPPEQVLVA 187 (247)
T ss_dssp EEGGCCCGCCTCECEEEETTSHCHHHHHHHHHHHCCTCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHHT--GGGEEEE
T ss_pred ccCCccccCCeeEEEEEecccchhHHHHHHHHHHHcCCCeeEEEccceeEEEccCCCCHHHHHHHHHHHhCCCHHHEEEE
Confidence 1 11123355666666655555555555544322222 22335677786 799999999873 3578999
Q ss_pred cCCccChhhhhhcCceEEecCCchHH
Q 001304 751 GDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 751 GDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
||+.||.+||..++-||.+ ||+..+
T Consensus 188 GDSgND~~mL~~~~~~vvV-~Na~~e 212 (247)
T PF05116_consen 188 GDSGNDLEMLEGGDHGVVV-GNAQPE 212 (247)
T ss_dssp ESSGGGHHHHCCSSEEEE--TTS-HH
T ss_pred eCCCCcHHHHcCcCCEEEE-cCCCHH
Confidence 9999999999999999999 776655
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00094 Score=72.59 Aligned_cols=50 Identities=26% Similarity=0.406 Sum_probs=43.0
Q ss_pred eeeccChh--hHHHHHHHHHhcCCeEEEEcC----CccChhhhhh-cCceEEecCCch
Q 001304 724 ICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQK-ADIGVGISGREG 774 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~~~~v~~iGD----G~ND~~ml~~-AdvGIam~g~~~ 774 (1104)
.+.+++|. +|+..++.|+ ..+.|+++|| |.||.+||+. .=.|+.++|.+.
T Consensus 179 ~~iDi~~~gvnKg~al~~L~-~~~e~~aFGD~~~~~~ND~eMl~~~~~~~~~~~~~~~ 235 (245)
T PLN02423 179 ISFDVFPQGWDKTYCLQFLE-DFDEIHFFGDKTYEGGNDHEIFESERTIGHTVTSPDD 235 (245)
T ss_pred EEEEEeeCCCCHHHHHHHhc-CcCeEEEEeccCCCCCCcHHHHhCCCcceEEeCCHHH
Confidence 57788887 7999999999 7788999999 8999999996 777888866554
|
|
| >TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein | Back alignment and domain information |
|---|
Probab=97.44 E-value=0.00047 Score=72.96 Aligned_cols=123 Identities=19% Similarity=0.228 Sum_probs=79.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||.....+..+....|+...-.. ++..+
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~~l~~~f~~--i~~~~--------------------------- 125 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLEALGLLPLFDH--VIGSD--------------------------- 125 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHcCChhheee--EEecC---------------------------
Confidence 6889999999999999999999999998888888888887321110 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee-c
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am-~ 770 (1104)
.....+=.|+-=..+++.++-..+.+++|||+.+|+.+-+.|++.. ++ .
T Consensus 126 -----------------------------~~~~~KP~~~~~~~~~~~~~~~~~~~l~igD~~~Di~aA~~~Gi~~i~~~~ 176 (205)
T TIGR01454 126 -----------------------------EVPRPKPAPDIVREALRLLDVPPEDAVMVGDAVTDLASARAAGTATVAALW 176 (205)
T ss_pred -----------------------------cCCCCCCChHHHHHHHHHcCCChhheEEEcCCHHHHHHHHHcCCeEEEEEe
Confidence 0000111121112233333334567999999999999999999975 33 1
Q ss_pred CC-chHH-HhhhcceecccchhhHH
Q 001304 771 GR-EGLQ-AARAADYSIGKFRFLKR 793 (1104)
Q Consensus 771 g~-~~~~-a~~~AD~vl~~f~~l~~ 793 (1104)
|. ...+ ....+|+++.+...+..
T Consensus 177 g~~~~~~l~~~~~~~~~~~~~~l~~ 201 (205)
T TIGR01454 177 GEGDAGELLAARPDFLLRKPQSLLA 201 (205)
T ss_pred cCCChhhhhhcCCCeeeCCHHHHHH
Confidence 22 1222 33478999888765543
|
The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00061 Score=73.26 Aligned_cols=123 Identities=24% Similarity=0.279 Sum_probs=81.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.|+++|+++.++||.....+..+.+..|+...-.. ++ .+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--~~--~~------------------------- 142 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVAPLLEALGIADYFSV--VI--GG------------------------- 142 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCccCccE--EE--cC-------------------------
Confidence 46889999999999999999999999999999999998887432110 00 00
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc-eEE
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVG 768 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIa 768 (1104)
.. +.+..| +--..+++.++...+.+++|||+.||+.|.+.|++ +|+
T Consensus 143 ------------------------------~~-~~~~kp~~~~~~~~~~~~~~~~~~~i~igD~~~Di~~a~~~g~~~i~ 191 (226)
T PRK13222 143 ------------------------------DS-LPNKKPDPAPLLLACEKLGLDPEEMLFVGDSRNDIQAARAAGCPSVG 191 (226)
T ss_pred ------------------------------CC-CCCCCcChHHHHHHHHHcCCChhheEEECCCHHHHHHHHHCCCcEEE
Confidence 00 001122 11122333333345679999999999999999999 556
Q ss_pred ec-CCc-hHHH-hhhcceecccchhhHHH
Q 001304 769 IS-GRE-GLQA-ARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 769 m~-g~~-~~~a-~~~AD~vl~~f~~l~~l 794 (1104)
+. |.. ..+. ...+|+++.++..+...
T Consensus 192 v~~g~~~~~~~~~~~~~~~i~~~~~l~~~ 220 (226)
T PRK13222 192 VTYGYNYGEPIALSEPDVVIDHFAELLPL 220 (226)
T ss_pred ECcCCCCccchhhcCCCEEECCHHHHHHH
Confidence 52 211 1122 23688999887776554
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0017 Score=70.65 Aligned_cols=176 Identities=15% Similarity=0.150 Sum_probs=92.5
Q ss_pred CCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHH--HcCCCCCCCCCeEEEecCCcH------------HHHHHHHHH
Q 001304 614 LQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIAL--SCNFISPEPKGQLLSIDGKTE------------DEVCRSLER 678 (1104)
Q Consensus 614 lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 678 (1104)
+-+++.++++.|.+. +..|+++||++......... .+++.... +..+..+|... .+....+.+
T Consensus 26 ~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~h--G~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 103 (244)
T TIGR00685 26 VSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEH--GCEMKDNGSCQDWVNLTEKIPSWKVRANELRE 103 (244)
T ss_pred CCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeec--CEEEecCCCcceeeechhhhhhHHHHHHHHHH
Confidence 457888999999766 56789999998765544321 12222211 11222233211 111122222
Q ss_pred HHHHccccCCCCCceEEEEcchhH---HHHHHHHHHHHHhHh-----hhccceeeeccChh--hHHHHHHHHHhc----C
Q 001304 679 VLLTMRITTSEPKDVAFVVDGWAL---EIALKHYRKAFTELA-----ILSRTAICCRVTPS--QKAQLVELLKSC----D 744 (1104)
Q Consensus 679 ~~~~~~~~~~~~~~~~lvi~g~~l---~~~~~~~~~~f~~l~-----~~~~~~i~~r~sP~--qK~~iV~~lk~~----~ 744 (1104)
......-..-+.+..++.+.-..- +.......+....+. .+.....+.++.|. +|+..++.+.+. .
T Consensus 104 ~~~~~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~~~~~~~v~~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~ 183 (244)
T TIGR00685 104 EITTRPGVFIERKGVALAWHYRQAPVPELARFRAKELKEKILSFTDLEVMDGKAVVELKPRFVNKGEIVKRLLWHQPGSG 183 (244)
T ss_pred HHhcCCCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHhcCCCEEEEECCeEEEEeeCCCCHHHHHHHHHHhcccCC
Confidence 222221122234556666543211 111111111111111 11122233454454 799888877652 3
Q ss_pred CeEEEEcCCccChhhhhhc--------CceEEecCCchHHHhhhcceecccchhhHHH
Q 001304 745 YRTLAIGDGGNDVRMIQKA--------DIGVGISGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 745 ~~v~~iGDG~ND~~ml~~A--------dvGIam~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
..++++||+.||.+|++.+ ..||.| + .+ ..+..|++++.+...+..+
T Consensus 184 ~~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v~v-~-~g-~~~~~A~~~~~~~~~v~~~ 238 (244)
T TIGR00685 184 ISPVYLGDDITDEDAFRVVNNQWGNYGFYPVPI-G-SG-SKKTVAKFHLTGPQQVLEF 238 (244)
T ss_pred CceEEEcCCCcHHHHHHHHhcccCCCCeEEEEE-e-cC-CcCCCceEeCCCHHHHHHH
Confidence 5799999999999999999 477777 3 22 2345799999876655443
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.00091 Score=74.01 Aligned_cols=119 Identities=21% Similarity=0.239 Sum_probs=78.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.++++.|+++|+++.++||.....+..+....|+...-.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~~~l~~~~i~~~f~---------------------------------- 145 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKPERFVAPLLDQMKIGRYFR---------------------------------- 145 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCcHHHHHHHHHHcCcHhhCe----------------------------------
Confidence 4688999999999999999999999998888888877777622100
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH--HHHHH-HHHh---cCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVE-LLKS---CDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK--~~iV~-~lk~---~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++...+..| ...++ .+++ ..+.+++|||+.||+.|.+.|++
T Consensus 146 ------------------------------~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~~l~IGD~~~Di~aA~~aGi 195 (272)
T PRK13223 146 ------------------------------WIIGGDTLPQKKPDPAALLFVMKMAGVPPSQSLFVGDSRSDVLAAKAAGV 195 (272)
T ss_pred ------------------------------EEEecCCCCCCCCCcHHHHHHHHHhCCChhHEEEECCCHHHHHHHHHCCC
Confidence 112222222222 22222 2222 34679999999999999999998
Q ss_pred e-EEec-CC-chHHHh-hhcceecccchhhHHH
Q 001304 766 G-VGIS-GR-EGLQAA-RAADYSIGKFRFLKRL 794 (1104)
Q Consensus 766 G-Iam~-g~-~~~~a~-~~AD~vl~~f~~l~~l 794 (1104)
. +++. |. ...+.. ..+|+++.+...|..+
T Consensus 196 ~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~~ 228 (272)
T PRK13223 196 QCVALSYGYNHGRPIAEESPALVIDDLRALLPG 228 (272)
T ss_pred eEEEEecCCCCchhhhhcCCCEEECCHHHHHHH
Confidence 4 4442 21 222223 3789999876666544
|
|
| >TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.00077 Score=71.71 Aligned_cols=115 Identities=16% Similarity=0.132 Sum_probs=77.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+...-.
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~----------------------------------- 129 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLELLGLAKYFS----------------------------------- 129 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCcHhhCc-----------------------------------
Confidence 578999999999999999999999999999999998888733211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee----ccChhhHHHHHHHHHh---cCCeEEEEcCCccChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC----RVTPSQKAQLVELLKS---CDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~----r~sP~qK~~iV~~lk~---~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++ +..|. ..-+.+.+++ ..+.+++|||+.+|+.|.+.|++
T Consensus 130 -----------------------------~~~~~~~~~~~Kp~-p~~~~~~~~~~~~~~~~~~~igDs~~d~~aa~~aG~ 179 (213)
T TIGR01449 130 -----------------------------VLIGGDSLAQRKPH-PDPLLLAAERLGVAPQQMVYVGDSRVDIQAARAAGC 179 (213)
T ss_pred -----------------------------EEEecCCCCCCCCC-hHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHCCC
Confidence 01111 11121 1122223333 34679999999999999999998
Q ss_pred eEE-ec-CCchH-HH-hhhcceecccchhhH
Q 001304 766 GVG-IS-GREGL-QA-ARAADYSIGKFRFLK 792 (1104)
Q Consensus 766 GIa-m~-g~~~~-~a-~~~AD~vl~~f~~l~ 792 (1104)
-.. +. |.... .. ...+|+++.++..+.
T Consensus 180 ~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~ 210 (213)
T TIGR01449 180 PSVLLTYGYRYGEAIDLLPPDVLYDSLNELP 210 (213)
T ss_pred eEEEEccCCCCCcchhhcCCCeEeCCHHHHH
Confidence 873 31 22111 12 236899888766543
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702). |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0053 Score=69.89 Aligned_cols=177 Identities=15% Similarity=0.171 Sum_probs=94.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEE-------------------ecCCc------
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-------------------IDGKT------ 668 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~-------------------~~~~~------ 668 (1104)
+-++++++++.|.+.. .|.++|||..........-.++.-.+..+.-+. ..|.+
T Consensus 142 ~s~~~~~aL~~La~~~-~VAIVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 220 (384)
T PLN02580 142 MSDAMRSAVKNVAKYF-PTAIISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQP 220 (384)
T ss_pred CCHHHHHHHHHHhhCC-CEEEEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCccccccccccccccccccccccccc
Confidence 4578889999998874 899999999998877664433311111110000 00110
Q ss_pred HHHHH---HHHHHHHHHc----cccCCCCCceEEEEcch-----hHHHHHHHHHHHHHhHh--hhccceeeeccChh---
Q 001304 669 EDEVC---RSLERVLLTM----RITTSEPKDVAFVVDGW-----ALEIALKHYRKAFTELA--ILSRTAICCRVTPS--- 731 (1104)
Q Consensus 669 ~~~~~---~~~~~~~~~~----~~~~~~~~~~~lvi~g~-----~l~~~~~~~~~~f~~l~--~~~~~~i~~r~sP~--- 731 (1104)
..+.. ..+.+.+... .-..-+.+..++.+.-. .-+...+...+...... .+....-+.++.|.
T Consensus 221 a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~~l~v~~Gk~vlEVrP~~g~ 300 (384)
T PLN02580 221 ASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYPRLRLTHGRKVLEVRPVIDW 300 (384)
T ss_pred chhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCCceEEEeCCeEEEEecCCCC
Confidence 00111 1111111111 11222455666654322 11222222222221111 11122345678874
Q ss_pred hHHHHHHHHHhc-C---C---eEEEEcCCccChhhhhh-----cCceEEecCCchHHHhhhcceecccchhhHHH
Q 001304 732 QKAQLVELLKSC-D---Y---RTLAIGDGGNDVRMIQK-----ADIGVGISGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 732 qK~~iV~~lk~~-~---~---~v~~iGDG~ND~~ml~~-----AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+|+..|+.+.+. + . .++++||+.||..|++. +++||+| |+... .-.|+|.|.+-..+..+
T Consensus 301 ~KG~Av~~Ll~~~g~~~~d~~~pi~iGDD~TDedmF~~L~~~~~G~~I~V-gn~~~--~t~A~y~L~dp~eV~~~ 372 (384)
T PLN02580 301 NKGKAVEFLLESLGLSNCDDVLPIYIGDDRTDEDAFKVLREGNRGYGILV-SSVPK--ESNAFYSLRDPSEVMEF 372 (384)
T ss_pred CHHHHHHHHHHhcCCCcccceeEEEECCCchHHHHHHhhhccCCceEEEE-ecCCC--CccceEEcCCHHHHHHH
Confidence 899999987652 2 1 25899999999999996 6899999 54321 12688988876555444
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0017 Score=69.15 Aligned_cols=124 Identities=19% Similarity=0.181 Sum_probs=78.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||.....+..+....|+...-.. ++..+
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--i~~~~--------------------------- 132 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTKMRDTVEMGLKLTGLDEFFDV--VITLD--------------------------- 132 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhceeE--EEecC---------------------------
Confidence 3789999999999999999999999999998888888887432110 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee-c
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am-~ 770 (1104)
..-..+-.|+--..+++.+.-....+++|||+.+|+.+-+.|++-. ++ .
T Consensus 133 -----------------------------~~~~~Kp~p~~~~~~~~~~~~~~~~~~~iGDs~~Di~aa~~aG~~~i~v~~ 183 (214)
T PRK13288 133 -----------------------------DVEHAKPDPEPVLKALELLGAKPEEALMVGDNHHDILAGKNAGTKTAGVAW 183 (214)
T ss_pred -----------------------------cCCCCCCCcHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEEEcC
Confidence 0000011122112233333333467999999999999999999854 23 1
Q ss_pred CCc-hHHHh-hhcceecccchhhHHH
Q 001304 771 GRE-GLQAA-RAADYSIGKFRFLKRL 794 (1104)
Q Consensus 771 g~~-~~~a~-~~AD~vl~~f~~l~~l 794 (1104)
|.. ..+.. ..+|+++.+++.+..+
T Consensus 184 g~~~~~~l~~~~~~~~i~~~~~l~~~ 209 (214)
T PRK13288 184 TIKGREYLEQYKPDFMLDKMSDLLAI 209 (214)
T ss_pred CCCCHHHHhhcCcCEEECCHHHHHHH
Confidence 321 22232 3589988877665543
|
|
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.03 E-value=0.0017 Score=69.56 Aligned_cols=116 Identities=11% Similarity=0.078 Sum_probs=77.6
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++-+++.++++.|++.|+++.++||.....+..+.+..|+...-..
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~~l~~~f~~--------------------------------- 137 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLEAVLTMFDLRDYFDA--------------------------------- 137 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHhCcchhcccE---------------------------------
Confidence 46789999999999999999999999999988888888887432110
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec----cChhhHHHHHHHHHhc---CCeEEEEcCCccChhhhhhcC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR----VTPSQKAQLVELLKSC---DYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r----~sP~qK~~iV~~lk~~---~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
++++. ..|.-. -+...+++. .+.+++|||+.||+.+-+.|+
T Consensus 138 -------------------------------~~~~~~~~~~Kp~~~-~~~~~~~~~~~~~~~~~~igDs~~Di~aA~~aG 185 (222)
T PRK10826 138 -------------------------------LASAEKLPYSKPHPE-VYLNCAAKLGVDPLTCVALEDSFNGMIAAKAAR 185 (222)
T ss_pred -------------------------------EEEcccCCCCCCCHH-HHHHHHHHcCCCHHHeEEEcCChhhHHHHHHcC
Confidence 11111 111111 122233333 367999999999999999999
Q ss_pred ceEEecCC--chHHH-hhhcceecccchhhH
Q 001304 765 IGVGISGR--EGLQA-ARAADYSIGKFRFLK 792 (1104)
Q Consensus 765 vGIam~g~--~~~~a-~~~AD~vl~~f~~l~ 792 (1104)
+....-.. ...+. ...||+++.++..+.
T Consensus 186 ~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 186 MRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred CEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 87643222 12112 225788888776653
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0026 Score=68.52 Aligned_cols=124 Identities=19% Similarity=0.159 Sum_probs=79.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.+...+..+....|+...-. .+
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~~~l~~~~l~~~f~---~i------------------------------ 141 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLARLILPQLGWEQRCA---VL------------------------------ 141 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCchhccc---EE------------------------------
Confidence 578999999999999999999999999888877777777632110 00
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee-c
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI-S 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am-~ 770 (1104)
+.+. ..-..+=.|+-=..+++.+.-..+.+++|||+.+|+.|-+.|++.. ++ .
T Consensus 142 ----~~~~---------------------~~~~~KP~p~~~~~~~~~l~~~p~~~l~IGDs~~Di~aA~~aG~~~i~v~~ 196 (229)
T PRK13226 142 ----IGGD---------------------TLAERKPHPLPLLVAAERIGVAPTDCVYVGDDERDILAARAAGMPSVAALW 196 (229)
T ss_pred ----EecC---------------------cCCCCCCCHHHHHHHHHHhCCChhhEEEeCCCHHHHHHHHHCCCcEEEEee
Confidence 0000 0000011222112334444434577999999999999999999885 33 1
Q ss_pred CCc-h-HHH-hhhcceecccchhhHHH
Q 001304 771 GRE-G-LQA-ARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 771 g~~-~-~~a-~~~AD~vl~~f~~l~~l 794 (1104)
|.. . ... ...+|+++.++..|...
T Consensus 197 g~~~~~~~~~~~~~~~~i~~~~el~~~ 223 (229)
T PRK13226 197 GYRLHDDDPLAWQADVLVEQPQLLWNP 223 (229)
T ss_pred cCCCCCcChhhcCCCeeeCCHHHHHHH
Confidence 211 1 112 23689999887766443
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0034 Score=68.83 Aligned_cols=124 Identities=15% Similarity=0.170 Sum_probs=81.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.++++++++.|+++|+++.++|+.....+..+...+|+...-.. ++..+.
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd~--ii~~~d-------------------------- 160 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTRPRRYLERAIEAVGMEGFFSV--VLAAED-------------------------- 160 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCcCHHHHHHHHHHcCCHhhCcE--EEeccc--------------------------
Confidence 5789999999999999999999999999999988888887432110 110000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-EecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am~g 771 (1104)
.-..+=.|+-=..+++.+.-....+++|||..+|+.+=+.|++-. ++.|
T Consensus 161 ------------------------------~~~~KP~Pe~~~~a~~~l~~~p~~~l~IgDs~~Di~aA~~aG~~~i~v~g 210 (260)
T PLN03243 161 ------------------------------VYRGKPDPEMFMYAAERLGFIPERCIVFGNSNSSVEAAHDGCMKCVAVAG 210 (260)
T ss_pred ------------------------------CCCCCCCHHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHcCCEEEEEec
Confidence 000001111111223333333467999999999999999999955 5544
Q ss_pred CchHHHhhhcceecccchhhHHH
Q 001304 772 REGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 772 ~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
.........+|+++.+++.+...
T Consensus 211 ~~~~~~l~~ad~vi~~~~el~~~ 233 (260)
T PLN03243 211 KHPVYELSAGDLVVRRLDDLSVV 233 (260)
T ss_pred CCchhhhccCCEEeCCHHHHHHH
Confidence 43333334689998887766544
|
|
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0048 Score=68.09 Aligned_cols=118 Identities=15% Similarity=0.151 Sum_probs=78.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++|+.....+..+.+..|+...-.
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~~~L~~~gl~~~F~----------------------------------- 186 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIEAFLQRQGLRSLFS----------------------------------- 186 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCChhheE-----------------------------------
Confidence 578999999999999999999999999999999999998732210
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh---cCCeEEEEcCCccChhhhhhcCceEE-
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS---CDYRTLAIGDGGNDVRMIQKADIGVG- 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~---~~~~v~~iGDG~ND~~ml~~AdvGIa- 768 (1104)
.++.++..+..+.-+.+.+++ ..+.+++|||+.+|+.+-+.|++-..
T Consensus 187 -----------------------------~vi~~~~~~~k~~~~~~~l~~~~~~p~~~l~IGDs~~Di~aA~~AG~~~I~ 237 (273)
T PRK13225 187 -----------------------------VVQAGTPILSKRRALSQLVAREGWQPAAVMYVGDETRDVEAARQVGLIAVA 237 (273)
T ss_pred -----------------------------EEEecCCCCCCHHHHHHHHHHhCcChhHEEEECCCHHHHHHHHHCCCeEEE
Confidence 001111111111122223332 34579999999999999999998752
Q ss_pred e-cCCch-HHH-hhhcceecccchhhHHH
Q 001304 769 I-SGREG-LQA-ARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 769 m-~g~~~-~~a-~~~AD~vl~~f~~l~~l 794 (1104)
+ .|... .+. ...+|+++.+...+..+
T Consensus 238 v~~g~~~~~~l~~~~ad~~i~~~~eL~~~ 266 (273)
T PRK13225 238 VTWGFNDRQSLVAACPDWLLETPSDLLQA 266 (273)
T ss_pred EecCCCCHHHHHHCCCCEEECCHHHHHHH
Confidence 2 23222 112 23689999887666543
|
|
| >smart00831 Cation_ATPase_N Cation transporter/ATPase, N-terminus | Back alignment and domain information |
|---|
Probab=96.87 E-value=0.00078 Score=56.39 Aligned_cols=44 Identities=20% Similarity=0.190 Sum_probs=37.3
Q ss_pred ccccCCCCceeecCC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 001304 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWS 59 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k-~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~ 59 (1104)
+|+++||.|+++..+ .++| +.+++||.++++++++++++++++.
T Consensus 18 ~r~~~~G~N~l~~~~~~s~~----~~~l~~~~~p~~~iL~~~a~is~~~ 62 (64)
T smart00831 18 RRLERYGPNELPPPKKRSPL----LRFLRQFHNPLIYILLAAAVLSALL 62 (64)
T ss_pred HHHHHhCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 588899999999987 4555 8899999999998888888887753
|
This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+, Na+, Ca2+, Na+/K+, and H+/K+. In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases PUBMED:12480547, PUBMED:12529322. |
| >TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0078 Score=63.70 Aligned_cols=106 Identities=18% Similarity=0.153 Sum_probs=72.8
Q ss_pred cCCCChHHHHH-HHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIE-TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~-~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.+.|++.++|+ .++++|++++++|+-....+..+|+..++..... ++..+ .+
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas~~~~~~~ia~~~~~~~~~~---~i~t~-le----------------------- 146 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGSPQPLVEAVYFDSNFIHRLN---LIASQ-IE----------------------- 146 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCCcHHHHHHHHHhccccccCc---EEEEE-eE-----------------------
Confidence 47899999996 7899999999999999999999999866643211 22111 00
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHH-hcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK-SCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk-~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
+.+|- ....-.+..++|..-++..- .......+-||+.||.|||+.||.++++.
T Consensus 147 ----~~~gg---------------------~~~g~~c~g~~Kv~rl~~~~~~~~~~~~aYsDS~~D~pmL~~a~~~~~Vn 201 (210)
T TIGR01545 147 ----RGNGG---------------------WVLPLRCLGHEKVAQLEQKIGSPLKLYSGYSDSKQDNPLLAFCEHRWRVS 201 (210)
T ss_pred ----EeCCc---------------------eEcCccCCChHHHHHHHHHhCCChhheEEecCCcccHHHHHhCCCcEEEC
Confidence 00110 00112355677877665432 22245679999999999999999999993
|
The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene. |
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0062 Score=65.11 Aligned_cols=118 Identities=14% Similarity=0.127 Sum_probs=72.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.||+.++++.|+++|+++.++|+.....+...-...|+... .. ++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~~~~l~~~~l~~~-~~--i~------------------------------ 129 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVASARHKAAGLPAP-EV--FV------------------------------ 129 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHHHHHHHhcCCCCc-cE--EE------------------------------
Confidence 5789999999999999999999999877666555556665211 00 11
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce-EEe
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam 769 (1104)
.++. + .+.-|. -=..+.+.+.-..+.+++|||..+|+.+=+.|++. |++
T Consensus 130 -----~~~~----------------------~-~~~KP~p~~~~~~~~~~g~~p~~~l~igDs~~di~aA~~aG~~~i~v 181 (218)
T PRK11587 130 -----TAER----------------------V-KRGKPEPDAYLLGAQLLGLAPQECVVVEDAPAGVLSGLAAGCHVIAV 181 (218)
T ss_pred -----EHHH----------------------h-cCCCCCcHHHHHHHHHcCCCcccEEEEecchhhhHHHHHCCCEEEEE
Confidence 0000 0 001121 11122233322347799999999999999999985 466
Q ss_pred cCCchHHHhhhcceecccchhh
Q 001304 770 SGREGLQAARAADYSIGKFRFL 791 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~l 791 (1104)
...........+|+++.+++.+
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 182 NAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CCCCchhhhccCCEEecchhhe
Confidence 3322222223688888776544
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.0083 Score=65.75 Aligned_cols=42 Identities=26% Similarity=0.222 Sum_probs=37.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
++-+|+.++++.|+++|+++.++||.....+..+.+..|+..
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~~~l~~~gl~~ 140 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMDVVAPEAALQG 140 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHHHHHHHHHhcC
Confidence 467999999999999999999999999998888888888743
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0096 Score=67.97 Aligned_cols=122 Identities=16% Similarity=0.200 Sum_probs=80.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+|+.++++.|+++|+++.++|+.....+..+-+..||...-.. ++.
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~~~L~~lgL~~yFd~--Iv~----------------------------- 264 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLENAIGSIGIRGFFSV--IVA----------------------------- 264 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCHHHceE--EEe-----------------------------
Confidence 4779999999999999999999999999999999998887432110 000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am 769 (1104)
+ ..+ .+-.|. -=...++.+.-..+.+++|||..+|+.+-+.|++-. ++
T Consensus 265 ------s----------------------ddv-~~~KP~Peifl~A~~~lgl~Peecl~IGDS~~DIeAAk~AGm~~IgV 315 (381)
T PLN02575 265 ------A----------------------EDV-YRGKPDPEMFIYAAQLLNFIPERCIVFGNSNQTVEAAHDARMKCVAV 315 (381)
T ss_pred ------c----------------------CcC-CCCCCCHHHHHHHHHHcCCCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 0 000 011121 112233333334577999999999999999999876 44
Q ss_pred cCCchHHHhhhcceecccchhhHHH
Q 001304 770 SGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
.+.........||+++.+++.+...
T Consensus 316 ~~~~~~~~l~~Ad~iI~s~~EL~~~ 340 (381)
T PLN02575 316 ASKHPIYELGAADLVVRRLDELSIV 340 (381)
T ss_pred CCCCChhHhcCCCEEECCHHHHHHH
Confidence 2211111123589998887776443
|
|
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.015 Score=64.23 Aligned_cols=41 Identities=24% Similarity=0.174 Sum_probs=35.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++-+|+.++++.|++.|+++.++||.....+..+-+..|+.
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~~~l~~~~l~ 141 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMDVVVPLAAAQ 141 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHHhhc
Confidence 56899999999999999999999999988877777766653
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.042 Score=69.86 Aligned_cols=187 Identities=19% Similarity=0.219 Sum_probs=99.1
Q ss_pred CcEEEEEEeecccCCCChHHHHHHH-HHcCCeEEEEcCCCHhHHHHHHHHc---CCCCCCCCCeEEEecCCc------H-
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETL-RKAGINFWMLTGDKQNTAIQIALSC---NFISPEPKGQLLSIDGKT------E- 669 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l-~~aGI~v~mlTGD~~~ta~~ia~~~---gi~~~~~~~~~~~~~~~~------~- 669 (1104)
|.+|+-.....-.+.+++.+++++| ++.|+.|+++||+...+.......+ +++..+ |..+...+.. .
T Consensus 604 DGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~~f~~~~~l~laaEH--G~~ir~~~~~~w~~~~~~ 681 (854)
T PLN02205 604 DGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLADWFSPCEKLGIAAEH--GYFLRLKRDVEWETCVPV 681 (854)
T ss_pred CCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHHHhCCCCCeEEEEeC--CEEEEeCCCceeeecchh
Confidence 4444433222235567889999997 7889999999999999988776543 333322 2222222211 0
Q ss_pred -HH-HHHHHHHHHHHc----cccCCCCCceEEEEcchhHH---------HHHHHHHHHHHhHh-hhccceeeeccChh--
Q 001304 670 -DE-VCRSLERVLLTM----RITTSEPKDVAFVVDGWALE---------IALKHYRKAFTELA-ILSRTAICCRVTPS-- 731 (1104)
Q Consensus 670 -~~-~~~~~~~~~~~~----~~~~~~~~~~~lvi~g~~l~---------~~~~~~~~~f~~l~-~~~~~~i~~r~sP~-- 731 (1104)
+. .........+.+ .-+.-+.+..+++.+-...+ .....+.+.+.... .+....-+.++.|.
T Consensus 682 ~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gv 761 (854)
T PLN02205 682 ADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDADPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGV 761 (854)
T ss_pred hhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCC
Confidence 11 111122222222 11112344556654432220 11111222221110 11122334566776
Q ss_pred hHHHHHHHHHh----cC---CeEEEEcCCccChhhhhhcC--------------ceEEecCCchHHHhhhcceecccchh
Q 001304 732 QKAQLVELLKS----CD---YRTLAIGDGGNDVRMIQKAD--------------IGVGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 732 qK~~iV~~lk~----~~---~~v~~iGDG~ND~~ml~~Ad--------------vGIam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
+|+..++.+.+ .| ..++++||+.||.+|++.++ ++|.+ |.. ...|.|-+.+-..
T Consensus 762 nKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~V-G~~----~S~A~y~L~d~~e 836 (854)
T PLN02205 762 SKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTV-GQK----PSKAKYYLDDTAE 836 (854)
T ss_pred CHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHhhhhccCCcccccccceeEEE-CCC----CccCeEecCCHHH
Confidence 69999988753 23 47999999999999999886 44555 432 1356676766544
Q ss_pred hHHH
Q 001304 791 LKRL 794 (1104)
Q Consensus 791 l~~l 794 (1104)
+..+
T Consensus 837 V~~l 840 (854)
T PLN02205 837 IVRL 840 (854)
T ss_pred HHHH
Confidence 4443
|
|
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.017 Score=61.25 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=73.1
Q ss_pred cCCCChHHHH-HHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETI-ETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I-~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.+.|++.++| +.+++.|++++++|+-...-+..++...|+... .+ ++..+- +
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas~~~~~~~il~~l~~~~~-~~--~i~t~l-~----------------------- 147 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGSPQPLVEQVYFDTPWLPR-VN--LIASQM-Q----------------------- 147 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcccccc-Cc--eEEEEE-E-----------------------
Confidence 4589999999 578899999999999999999999999886321 11 221110 0
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-HhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
...+| ......+..+.|..-++.. ........+-||+.||.|||+.|+.++++.
T Consensus 148 ---~~~tg----------------------~~~g~~c~g~~K~~~l~~~~~~~~~~~~aY~Ds~~D~pmL~~a~~~~~vn 202 (211)
T PRK11590 148 ---RRYGG----------------------WVLTLRCLGHEKVAQLERKIGTPLRLYSGYSDSKQDNPLLYFCQHRWRVT 202 (211)
T ss_pred ---EEEcc----------------------EECCccCCChHHHHHHHHHhCCCcceEEEecCCcccHHHHHhCCCCEEEC
Confidence 00011 0111235567787766643 323345679999999999999999999993
|
|
| >PF00690 Cation_ATPase_N: Cation transporter/ATPase, N-terminus; InterPro: IPR004014 ATPases (or ATP synthases) are membrane-bound enzyme complexes/ion transporters that combine ATP synthesis and/or hydrolysis with the transport of protons across a membrane | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.0011 Score=56.48 Aligned_cols=41 Identities=24% Similarity=0.319 Sum_probs=34.2
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQ 56 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~ 56 (1104)
+|+++||+|+++..+. ++| +.+++||.++++++++++++++
T Consensus 28 ~r~~~~G~N~l~~~~~~s~~----~~~~~~f~~~~~~lL~~aailS 69 (69)
T PF00690_consen 28 ERRKKYGPNELPEPKKKSLW----RIFLKQFKNPFIILLLIAAILS 69 (69)
T ss_dssp HHHHHHSSSSTTTTTSSSHH----HHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHHhcccccccccccCcHH----HHHHHHHHhHHHHHHHHHHHHC
Confidence 5888999999977665 555 8999999999998888887764
|
ATPases can harness the energy from a proton gradient, using the flux of ions across the membrane via the ATPase proton channel to drive the synthesis of ATP. Some ATPases work in reverse, using the energy from the hydrolysis of ATP to create a proton gradient. There are different types of ATPases, which can differ in function (ATP synthesis and/or hydrolysis), structure (e.g., F-, V- and A-ATPases, which contain rotary motors) and in the type of ions they transport [, ]. The different types include: F-ATPases (F1F0-ATPases), which are found in mitochondria, chloroplasts and bacterial plasma membranes where they are the prime producers of ATP, using the proton gradient generated by oxidative phosphorylation (mitochondria) or photosynthesis (chloroplasts). V-ATPases (V1V0-ATPases), which are primarily found in eukaryotic vacuoles and catalyse ATP hydrolysis to transport solutes and lower pH in organelles. A-ATPases (A1A0-ATPases), which are found in Archaea and function like F-ATPases (though with respect to their structure and some inhibitor responses, A-ATPases are more closely related to the V-ATPases). P-ATPases (E1E2-ATPases), which are found in bacteria and in eukaryotic plasma membranes and organelles, and function to transport a variety of different ions across membranes. E-ATPases, which are cell-surface enzymes that hydrolyse a range of NTPs, including extracellular ATP. P-ATPases (sometime known as E1-E2 ATPases) (3.6.3.- from EC) are found in bacteria and in a number of eukaryotic plasma membranes and organelles []. P-ATPases function to transport a variety of different compounds, including ions and phospholipids, across a membrane using ATP hydrolysis for energy. There are many different classes of P-ATPases, each of which transports a specific type of ion: H+, Na+, K+, Mg2+, Ca2+, Ag+ and Ag2+, Zn2+, Co2+, Pb2+, Ni2+, Cd2+, Cu+ and Cu2+. P-ATPases can be composed of one or two polypeptides, and can usually assume two main conformations called E1 and E2. This entry represents the conserved N-terminal region found in several classes of cation-transporting P-type ATPases, including those that transport H+ (3.6.3.6 from EC), Na+ (3.6.3.7 from EC), Ca2+ (3.6.3.8 from EC), Na+/K+ (3.6.3.9 from EC), and H+/K+ (3.6.3.10 from EC). In the H+/K+- and Na+/K+-exchange P-ATPases, this domain is found in the catalytic alpha chain. In gastric H+/K+-ATPases, this domain undergoes reversible sequential phosphorylation inducing conformational changes that may be important for regulating the function of these ATPases [, ]. More information about this protein can be found at Protein of the Month: ATP Synthases [].; PDB: 3KDP_C 3N2F_A 3B8E_A 3N23_A 2XZB_A 1MHS_B 3A3Y_A 2ZXE_A 3B8C_A 3B9B_A .... |
| >TIGR03351 PhnX-like phosphonatase-like hydrolase | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.0088 Score=63.97 Aligned_cols=42 Identities=24% Similarity=0.317 Sum_probs=38.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.++.+|+.+.++.|+++|+++.++||-....+..+....|+.
T Consensus 86 ~~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~~~l~~~~l~ 127 (220)
T TIGR03351 86 PVALPGAEEAFRSLRSSGIKVALTTGFDRDTAERLLEKLGWT 127 (220)
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHhhhh
Confidence 479999999999999999999999999999999988888874
|
This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.021 Score=57.27 Aligned_cols=105 Identities=18% Similarity=0.166 Sum_probs=68.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHH---HHHHHc---CCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHcc
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI---QIALSC---NFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMR 684 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~---~ia~~~---gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1104)
+|.+.+++.+++++++++|++++++||+....+. ....++ |.--+. +.++..+|....+..
T Consensus 25 ~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~--g~li~~~g~~~~~~~----------- 91 (157)
T smart00775 25 KDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPH--GPVLLSPDRLFAALH----------- 91 (157)
T ss_pred cCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCC--ceEEEcCCcchhhhh-----------
Confidence 5788999999999999999999999999988874 444442 211111 224444443321110
Q ss_pred ccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh-hHHHHHHHHHh-----cCCeEEEEcCCccChh
Q 001304 685 ITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS-QKAQLVELLKS-----CDYRTLAIGDGGNDVR 758 (1104)
Q Consensus 685 ~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~-qK~~iV~~lk~-----~~~~v~~iGDG~ND~~ 758 (1104)
+ .+. .-.|+ .|...++.+.+ ....++++||+.+|+.
T Consensus 92 ------------------------------------~-e~i-~~~~~~~K~~~l~~i~~~~~~~~~~f~~~~gn~~~D~~ 133 (157)
T smart00775 92 ------------------------------------R-EVI-SKKPEVFKIACLRDIKSLFPPQGNPFYAGFGNRITDVI 133 (157)
T ss_pred ------------------------------------c-ccc-cCCHHHHHHHHHHHHHHhcCCCCCCEEEEeCCCchhHH
Confidence 0 001 11232 36666666665 2356788999999999
Q ss_pred hhhhcCce
Q 001304 759 MIQKADIG 766 (1104)
Q Consensus 759 ml~~AdvG 766 (1104)
+-++++|-
T Consensus 134 ~y~~~gi~ 141 (157)
T smart00775 134 SYSAVGIP 141 (157)
T ss_pred HHHHcCCC
Confidence 99988774
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.1 Score=59.12 Aligned_cols=191 Identities=14% Similarity=0.151 Sum_probs=100.9
Q ss_pred cCcEEEEEEeecc--cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC----------
Q 001304 600 HDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK---------- 667 (1104)
Q Consensus 600 ~~l~llG~i~i~D--~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~---------- 667 (1104)
-|.+|+-++.-.| .+.+++.++|++|. .|++++++||+....+..+..-.++.--..++..+...+.
T Consensus 118 ~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~l~~l~l~g~hGa~i~~p~~~~~~~~~~~~ 196 (366)
T PLN03017 118 YDGTLSPIVDDPDKAFMSSKMRRTVKKLA-KCFPTAIVTGRCIDKVYNFVKLAELYYAGSHGMDIKGPAKGFSRHKRVKQ 196 (366)
T ss_pred cCCcCcCCcCCcccccCCHHHHHHHHHHh-cCCcEEEEeCCCHHHHHHhhcccCceEEEcCCcEEecCCCcceecccccc
Confidence 3566665554333 47789999999999 7899999999999998877322111000111111110000
Q ss_pred -----cHHHHHHHHHHH---HHH----ccccCCCCCceEEEEcchhH-----HHHHHHHHHHHHhHh--hhccceeeecc
Q 001304 668 -----TEDEVCRSLERV---LLT----MRITTSEPKDVAFVVDGWAL-----EIALKHYRKAFTELA--ILSRTAICCRV 728 (1104)
Q Consensus 668 -----~~~~~~~~~~~~---~~~----~~~~~~~~~~~~lvi~g~~l-----~~~~~~~~~~f~~l~--~~~~~~i~~r~ 728 (1104)
...+....++.. +.. ..-..-+.+..++.+.-... ..+............ .+....-..++
T Consensus 197 ~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~~~~l~~~~~~vl~~~~~l~v~~GkkVlEv 276 (366)
T PLN03017 197 SLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKKWSELVLQVRSVLKNFPTLKLTQGRKVFEI 276 (366)
T ss_pred ccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHHHHHHHHHHHHHHHhCCCcEEeCCCeEEEe
Confidence 000011112222 211 11122245566665533221 122222222111111 11223344566
Q ss_pred Chh---hHHHHHHHHHhc-------CCeEEEEcCCccChhhhhhc-----CceEEecCCchHHHhhhcceecccchhhHH
Q 001304 729 TPS---QKAQLVELLKSC-------DYRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 729 sP~---qK~~iV~~lk~~-------~~~v~~iGDG~ND~~ml~~A-----dvGIam~g~~~~~a~~~AD~vl~~f~~l~~ 793 (1104)
.|. +|+..|+.+.+. +..++++||...|-.|++.. ++||-+ |... -...|+|.|.+-.....
T Consensus 277 RP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-G~~~--k~T~A~y~L~dp~eV~~ 353 (366)
T PLN03017 277 RPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRGEGFGILV-SKFP--KDTDASYSLQDPSEVMD 353 (366)
T ss_pred cCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcCCceEEEE-CCCC--CCCcceEeCCCHHHHHH
Confidence 763 899999987752 23589999999999999866 355555 4311 12468898877555444
Q ss_pred H
Q 001304 794 L 794 (1104)
Q Consensus 794 l 794 (1104)
+
T Consensus 354 f 354 (366)
T PLN03017 354 F 354 (366)
T ss_pred H
Confidence 3
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=96.29 E-value=0.0078 Score=64.49 Aligned_cols=40 Identities=13% Similarity=0.240 Sum_probs=35.1
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCC----CHhHHHHHHHHcCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGD----KQNTAIQIALSCNFI 653 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD----~~~ta~~ia~~~gi~ 653 (1104)
+.+++++.++.++++|+++.++|++ ...++..+.+..|+.
T Consensus 115 p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 115 PKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred chhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 4455999999999999999999998 667889999889983
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.022 Score=62.23 Aligned_cols=115 Identities=13% Similarity=0.116 Sum_probs=78.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|++.++++.|++.|+++.++|+-....+....+..|+...-.
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~~~l~~~gl~~~Fd----------------------------------- 152 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAELMISLLGLSDFFQ----------------------------------- 152 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCChhhCc-----------------------------------
Confidence 578999999999999999999999999999999888888743211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
.+++++- .|+-=..+.+.+.-..+.+++|||+.+|+.+=+.|++-
T Consensus 153 -----------------------------~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~~l~vgDs~~Di~aA~~aGi~ 203 (248)
T PLN02770 153 -----------------------------AVIIGSECEHAKPHPDPYLKALEVLKVSKDHTFVFEDSVSGIKAGVAAGMP 203 (248)
T ss_pred -----------------------------EEEecCcCCCCCCChHHHHHHHHHhCCChhHEEEEcCCHHHHHHHHHCCCE
Confidence 1111111 11111223333333446799999999999999999986
Q ss_pred E-Ee-cCCchHHHhh-hcceecccchhh
Q 001304 767 V-GI-SGREGLQAAR-AADYSIGKFRFL 791 (1104)
Q Consensus 767 I-am-~g~~~~~a~~-~AD~vl~~f~~l 791 (1104)
. ++ .|....+... .+|+++.++..+
T Consensus 204 ~i~v~~g~~~~~l~~~~a~~vi~~~~e~ 231 (248)
T PLN02770 204 VVGLTTRNPESLLMEAKPTFLIKDYEDP 231 (248)
T ss_pred EEEEeCCCCHHHHhhcCCCEEeccchhh
Confidence 5 33 1322222222 689998877653
|
|
| >TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544 | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.047 Score=59.54 Aligned_cols=44 Identities=16% Similarity=0.327 Sum_probs=40.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~ 656 (1104)
++++|+.+.++.|+++|+++.++||-....+..+.++.|+..+.
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~~lgl~~~~ 164 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLRQAGVYHPN 164 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHHcCCCCcC
Confidence 47999999999999999999999999999999999999986544
|
This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB. |
| >TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548 | Back alignment and domain information |
|---|
Probab=96.08 E-value=0.014 Score=61.17 Aligned_cols=43 Identities=16% Similarity=0.150 Sum_probs=38.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.+++.++++++++.|+++|+++.++||.....+..+.+.+|+.
T Consensus 104 ~~~~~~~~~~~L~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~ 146 (197)
T TIGR01548 104 EDETLLTPKGLLRELHRAPKGMAVVTGRPRKDAAKFLTTHGLE 146 (197)
T ss_pred ccccccCHHHHHHHHHHcCCcEEEECCCCHHHHHHHHHHcCch
Confidence 4556778899999999999999999999999999999999984
|
All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.03 E-value=0.016 Score=62.12 Aligned_cols=40 Identities=15% Similarity=0.227 Sum_probs=34.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC----HhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK----QNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~----~~ta~~ia~~~gi 652 (1104)
.+.+++++.++.+++.|+++.++||+. ..++..+.+..|+
T Consensus 114 ~p~~Ga~elL~~L~~~G~~I~iVTnR~~~k~~~t~~~Llk~~gi 157 (237)
T PRK11009 114 IPKEVARQLIDMHVKRGDSIYFITGRTATKTETVSKTLADDFHI 157 (237)
T ss_pred cchHHHHHHHHHHHHCCCeEEEEeCCCCcccHHHHHHHHHHcCC
Confidence 467889999999999999999999974 5588888888887
|
|
| >PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.025 Score=67.79 Aligned_cols=120 Identities=14% Similarity=0.123 Sum_probs=78.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.||+.++++.|++.|+++.++|+.....+..+...+|+...-.. ++..+.
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~~~l~~~~l~~~f~~--i~~~d~-------------------------- 381 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLRAIVSYYDLDQWVTE--TFSIEQ-------------------------- 381 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHCCcHhhcce--eEecCC--------------------------
Confidence 6789999999999999999999999999999999998887432111 111000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cCCeEEEEcCCccChhhhhhcCceE-Eec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGV-GIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~~~v~~iGDG~ND~~ml~~AdvGI-am~ 770 (1104)
+-..-.|+ -+...+++ ..+.+++|||+.+|+.+-+.|++-. ++.
T Consensus 382 -------------------------------v~~~~kP~---~~~~al~~l~~~~~v~VGDs~~Di~aAk~AG~~~I~v~ 427 (459)
T PRK06698 382 -------------------------------INSLNKSD---LVKSILNKYDIKEAAVVGDRLSDINAAKDNGLIAIGCN 427 (459)
T ss_pred -------------------------------CCCCCCcH---HHHHHHHhcCcceEEEEeCCHHHHHHHHHCCCeEEEEe
Confidence 00000121 11122222 2356999999999999999999854 441
Q ss_pred -CCchHHHhhhcceecccchhhHHH
Q 001304 771 -GREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 771 -g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+....+....+|+++.+++.+..+
T Consensus 428 ~~~~~~~~~~~~d~~i~~l~el~~~ 452 (459)
T PRK06698 428 FDFAQEDELAQADIVIDDLLELKGI 452 (459)
T ss_pred CCCCcccccCCCCEEeCCHHHHHHH
Confidence 211111223689999887766554
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.023 Score=60.73 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=36.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|++++++|+-....+....+..|+
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~~l 133 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQWEKLERLGV 133 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhCCh
Confidence 5789999999999999999999999988888877777776
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >COG4030 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.074 Score=54.29 Aligned_cols=148 Identities=24% Similarity=0.315 Sum_probs=83.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecC-CcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDG-KTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
++-|++.+|++.|++.=-.+ ++|---..-+..+|..+|+-..+..+.-..++. ..+++.. +..+..+..
T Consensus 83 ~lvPgA~etm~~l~~~~tp~-v~STSY~qy~~r~a~~ig~Prg~~~~Te~~lD~~~~PeeeR---~E~L~~~~~------ 152 (315)
T COG4030 83 KLVPGAEETMATLQERWTPV-VISTSYTQYLRRTASMIGVPRGELHGTEVDLDSIAVPEEER---EELLSIIDV------ 152 (315)
T ss_pred ccCCChHHHHHHHhccCCce-EEeccHHHHHHHHHHhcCCCccccccccccCccccCChHHH---HHHHHhcCc------
Confidence 46799999999998764444 444445556788888888843322211222331 1112211 122221110
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh---------------hHHHHHHHHHhc---CCeEEEEcCC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS---------------QKAQLVELLKSC---DYRTLAIGDG 753 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~---------------qK~~iV~~lk~~---~~~v~~iGDG 753 (1104)
.-.++|+.|-.-+++ +|.|..|. .|+.+++.+.+. ..-.+++||+
T Consensus 153 --~~~~~geelfe~lDe---------------~F~rLip~E~gki~~~vk~VGgg~ka~i~e~~~ele~~d~sa~~VGDS 215 (315)
T COG4030 153 --IASLSGEELFEKLDE---------------LFSRLIPSEVGKIVESVKAVGGGEKAKIMEGYCELEGIDFSAVVVGDS 215 (315)
T ss_pred --cccccHHHHHHHHHH---------------HHhhcCHHHHHHHHHhhhhccCcchhHHHHHHHhhcCCCcceeEecCc
Confidence 112344433322222 22333443 355666655542 2346899999
Q ss_pred ccChhhhhhcC----ceEEecCCchHHHhhhcceecccch
Q 001304 754 GNDVRMIQKAD----IGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 754 ~ND~~ml~~Ad----vGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
+.|+.||+++. +.|+..||+- |.+.||+.+..-.
T Consensus 216 ItDv~ml~~~rgrGglAvaFNGNeY--al~eAdVAvisp~ 253 (315)
T COG4030 216 ITDVKMLEAARGRGGLAVAFNGNEY--ALKEADVAVISPT 253 (315)
T ss_pred ccchHHHHHhhccCceEEEecCCcc--cccccceEEeccc
Confidence 99999999874 5567777765 7789999886533
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.044 Score=56.14 Aligned_cols=41 Identities=20% Similarity=0.211 Sum_probs=31.7
Q ss_pred cCcEEEEEEeecc----cCCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 600 HDLKVLGVTAIED----RLQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 600 ~~l~llG~i~i~D----~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
.|.++.|-..+.+ ++.++++++++.|++.|+++.++|+...
T Consensus 11 ~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 11 RDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCch
Confidence 4555555544443 3689999999999999999999998753
|
|
| >PLN02811 hydrolase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.039 Score=59.00 Aligned_cols=31 Identities=23% Similarity=0.346 Sum_probs=27.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTA 643 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta 643 (1104)
++.+++.++|+.|+++|+++.++||-.....
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~ 108 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHF 108 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhH
Confidence 5789999999999999999999998765533
|
|
| >TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.045 Score=57.39 Aligned_cols=40 Identities=13% Similarity=0.259 Sum_probs=36.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|+++.++|+-+...+..+....|+
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~~~gl 131 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLKSLVKHAGL 131 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHCCC
Confidence 5789999999999999999999999988888888888887
|
Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.50 E-value=0.037 Score=62.29 Aligned_cols=107 Identities=17% Similarity=0.087 Sum_probs=72.2
Q ss_pred ecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC-CCCCCeEEEecCCcHHHHHHHHHHHHHHccccCC
Q 001304 610 IEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-PEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTS 688 (1104)
Q Consensus 610 i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 688 (1104)
..+++.+++.++++.|++.|++++++||+....+..+...+|+.. .-.. +.+.+..
T Consensus 184 ~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~~l~~~~~~f~~-----i~~~~~~------------------ 240 (300)
T PHA02530 184 KEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVEWLRQTDIWFDD-----LIGRPPD------------------ 240 (300)
T ss_pred ccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHHHHHHcCCchhh-----hhCCcch------------------
Confidence 567899999999999999999999999999999999888888743 1000 0000000
Q ss_pred CCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cCCeEEEEcCCccChhhhhhcCceE
Q 001304 689 EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 689 ~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
..|. +..---+-.|.-+...++.+.. ....++|+||..+|+.+-+.|++-+
T Consensus 241 ----------------------~~~~------~~~~~~kp~p~~~~~~l~~~~~~~~~~~~~vgD~~~d~~~a~~~Gi~~ 292 (300)
T PHA02530 241 ----------------------MHFQ------REQGDKRPDDVVKEEIFWEKIAPKYDVLLAVDDRDQVVDMWRRIGLEC 292 (300)
T ss_pred ----------------------hhhc------ccCCCCCCcHHHHHHHHHHHhccCceEEEEEcCcHHHHHHHHHhCCeE
Confidence 0000 0000012234455555555433 3378999999999999999999986
|
|
| >PRK14988 GMP/IMP nucleotidase; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.045 Score=58.68 Aligned_cols=40 Identities=15% Similarity=0.165 Sum_probs=35.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+|+.++++.|+++|+++.++|+-....+.......|+
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~~~l~~~~l 132 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLAVKLEHTGL 132 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHHHHHHHCCc
Confidence 5789999999999999999999999888887777777776
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.061 Score=53.31 Aligned_cols=109 Identities=15% Similarity=0.196 Sum_probs=67.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.++|+-++.++.+++.+|.++++||-...-...+-...+ ..+. +.+++-. ..+
T Consensus 73 ~Idp~fKef~e~ike~di~fiVvSsGm~~fI~~lfe~iv--gke~---i~~idi~----------------------sn~ 125 (220)
T COG4359 73 KIDPGFKEFVEWIKEHDIPFIVVSSGMDPFIYPLFEGIV--GKER---IYCIDIV----------------------SNN 125 (220)
T ss_pred ccCccHHHHHHHHHHcCCCEEEEeCCCchHHHHHHHhhc--cccc---eeeeEEe----------------------ecC
Confidence 478999999999999999999998876554444444332 1100 0000000 000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIa 768 (1104)
..+-++|. ...++-.-+| .+|...|+.+++..+.+.++|||+.|++|-+.+|+=.|
T Consensus 126 ~~ih~dg~--------------------h~i~~~~ds~fG~dK~~vI~~l~e~~e~~fy~GDsvsDlsaaklsDllFA 183 (220)
T COG4359 126 DYIHIDGQ--------------------HSIKYTDDSQFGHDKSSVIHELSEPNESIFYCGDSVSDLSAAKLSDLLFA 183 (220)
T ss_pred ceEcCCCc--------------------eeeecCCccccCCCcchhHHHhhcCCceEEEecCCcccccHhhhhhhHhh
Confidence 00011110 0111111122 37999999999998999999999999999888887554
|
|
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.11 Score=53.05 Aligned_cols=53 Identities=17% Similarity=0.178 Sum_probs=43.3
Q ss_pred CcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCC-CHhHHHHHHHHcCCC
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCNFI 653 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~ta~~ia~~~gi~ 653 (1104)
+.......+-+-++.+++.++++.|+++|+++.++|+- ....+..+....|+.
T Consensus 33 ~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~~~~l~ 86 (174)
T TIGR01685 33 NSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILGTFEIT 86 (174)
T ss_pred CCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHHhCCcC
Confidence 33455555556678999999999999999999999976 888888888888873
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.045 Score=63.58 Aligned_cols=40 Identities=10% Similarity=0.165 Sum_probs=33.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHH-HcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL-SCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~-~~gi 652 (1104)
++.+|+.++++.|++.|+++.++|+.....+..... ..|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~~~l~~~~gl 133 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIEAKISCHQGW 133 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhccCh
Confidence 467999999999999999999999998887766554 4565
|
|
| >PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A | Back alignment and domain information |
|---|
Probab=95.33 E-value=0.035 Score=56.47 Aligned_cols=43 Identities=16% Similarity=0.228 Sum_probs=39.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
..++.+++.+.++.|+++|++++++|+.....+....+..|+.
T Consensus 75 ~~~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~~~~~~ 117 (176)
T PF13419_consen 75 KLQPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLERLGLD 117 (176)
T ss_dssp GEEESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHHHTTHG
T ss_pred ccchhhhhhhhhhhcccccceeEEeecCCcccccccccccccc
Confidence 4568999999999999999999999999999888999998874
|
... |
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.11 Score=53.73 Aligned_cols=52 Identities=17% Similarity=0.148 Sum_probs=34.7
Q ss_pred cCCeEEEEcCCccChhhhhhcCceE-Ee-cCCchH-HHhhhc--ceecccchhhHHH
Q 001304 743 CDYRTLAIGDGGNDVRMIQKADIGV-GI-SGREGL-QAARAA--DYSIGKFRFLKRL 794 (1104)
Q Consensus 743 ~~~~v~~iGDG~ND~~ml~~AdvGI-am-~g~~~~-~a~~~A--D~vl~~f~~l~~l 794 (1104)
..+.+++|||+.+|+.+-+.|++.. ++ .|.... .....+ |+++.++..+..+
T Consensus 119 ~~~~~~~VgDs~~Di~~A~~aG~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~ 175 (181)
T PRK08942 119 DLAGSPMVGDSLRDLQAAAAAGVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQA 175 (181)
T ss_pred ChhhEEEEeCCHHHHHHHHHCCCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHH
Confidence 4478999999999999999999865 23 122111 112245 8888877666554
|
|
| >PRK09449 dUMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.07 Score=57.16 Aligned_cols=39 Identities=13% Similarity=0.110 Sum_probs=33.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+ +|+++.++|+.....+...-...|+
T Consensus 95 ~~~~g~~~~L~~L~-~~~~~~i~Tn~~~~~~~~~l~~~~l 133 (224)
T PRK09449 95 TPLPGAVELLNALR-GKVKMGIITNGFTELQQVRLERTGL 133 (224)
T ss_pred ccCccHHHHHHHHH-hCCeEEEEeCCcHHHHHHHHHhCCh
Confidence 46899999999999 6899999999888777777777776
|
|
| >PLN02779 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.083 Score=58.89 Aligned_cols=38 Identities=18% Similarity=0.248 Sum_probs=32.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
++.|++.+.++.|++.|+++.++|+-....+..+-...
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999998887776655544
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=95.21 E-value=0.086 Score=51.20 Aligned_cols=40 Identities=18% Similarity=0.269 Sum_probs=34.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC--------HhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK--------QNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~--------~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|+++.++|+.. ...+..+....|+
T Consensus 25 ~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l 72 (132)
T TIGR01662 25 ILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLEELGV 72 (132)
T ss_pred eeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHHHCCC
Confidence 578999999999999999999999988 6666777777776
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.052 Score=56.15 Aligned_cols=39 Identities=18% Similarity=0.275 Sum_probs=33.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
-++.+|+.++++.|+++|+++.++|+. ..+..+.+..|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~--~~~~~~l~~~~l 125 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS--KNADRILAKLGL 125 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc--hhHHHHHHHcCh
Confidence 368999999999999999999999987 556666777776
|
All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509). |
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=94.74 E-value=0.048 Score=56.37 Aligned_cols=38 Identities=16% Similarity=0.295 Sum_probs=30.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.|++.++++.|+++|+++.++|+... +....+..|+
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~--~~~~l~~~~l 124 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKN--APTVLEKLGL 124 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCcc--HHHHHHhcCc
Confidence 6789999999999999999999997532 3455666666
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=94.60 E-value=0.24 Score=55.99 Aligned_cols=177 Identities=13% Similarity=0.172 Sum_probs=92.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEE-e-cC------------CcHHHHHHHHHHH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS-I-DG------------KTEDEVCRSLERV 679 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~-~-~~------------~~~~~~~~~~~~~ 679 (1104)
+.++++++|+.|. ++..+.++||+.......+..-.++.-.+.++.-+. . .+ ....+....++..
T Consensus 121 ~~~~~~~aL~~La-~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~~~~~~~~~~~~~~~~~~~~~i~~v 199 (354)
T PLN02151 121 MSKKMRNTVRKLA-KCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGSKYKKENQSLLCQPATEFLPVINEV 199 (354)
T ss_pred CCHHHHHHHHHHh-cCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCccccccccccccccchhhHHHHHHH
Confidence 5678889999999 567999999999998877664333211111111111 0 00 0000111112222
Q ss_pred HHHc-------cccCCCCCceEEEEcchh-----HHHHHHHHHHHHHhHh--hhccceeeeccChh---hHHHHHHHHHh
Q 001304 680 LLTM-------RITTSEPKDVAFVVDGWA-----LEIALKHYRKAFTELA--ILSRTAICCRVTPS---QKAQLVELLKS 742 (1104)
Q Consensus 680 ~~~~-------~~~~~~~~~~~lvi~g~~-----l~~~~~~~~~~f~~l~--~~~~~~i~~r~sP~---qK~~iV~~lk~ 742 (1104)
...+ .-..-+.+.+++.+.-.. ...+.....+...... .+....-..++.|. +|+..|+.+.+
T Consensus 200 ~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~ 279 (354)
T PLN02151 200 YKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLE 279 (354)
T ss_pred HHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHH
Confidence 1111 112224556666653321 1222222222111111 11223334566664 89999998775
Q ss_pred c-C------CeEEEEcCCccChhhhhhc-----CceEEecCCchHHHhhhcceecccchhhHHH
Q 001304 743 C-D------YRTLAIGDGGNDVRMIQKA-----DIGVGISGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 743 ~-~------~~v~~iGDG~ND~~ml~~A-----dvGIam~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
. + ..++++||-..|-.|++.. ++||-+ |... -.-.|+|.|.+-.-...+
T Consensus 280 ~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~V-g~~~--k~T~A~y~L~dp~eV~~~ 340 (354)
T PLN02151 280 SLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILV-SKYA--KETNASYSLQEPDEVMEF 340 (354)
T ss_pred hcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEe-ccCC--CCCcceEeCCCHHHHHHH
Confidence 3 2 2489999999999999864 566655 3211 112789999876555444
|
|
| >TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED | Back alignment and domain information |
|---|
Probab=94.46 E-value=0.11 Score=53.37 Aligned_cols=39 Identities=21% Similarity=0.320 Sum_probs=32.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|++++++|+-.... ..+..++|+
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~~~~~~~~l 123 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-AVLVQELGL 123 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-HHHHHhcCC
Confidence 578999999999999999999999988777 544445776
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254 | Back alignment and domain information |
|---|
Probab=94.43 E-value=0.12 Score=55.21 Aligned_cols=40 Identities=18% Similarity=0.317 Sum_probs=35.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++.+++.++++.|++. +++.++|+-....+..+..+.|+.
T Consensus 97 ~~~~g~~~~L~~l~~~-~~~~i~Sn~~~~~~~~~l~~~~l~ 136 (224)
T TIGR02254 97 QLLPGAFELMENLQQK-FRLYIVTNGVRETQYKRLRKSGLF 136 (224)
T ss_pred eeCccHHHHHHHHHhc-CcEEEEeCCchHHHHHHHHHCCcH
Confidence 5789999999999999 999999999888888888888873
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases. |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=94.22 E-value=0.052 Score=53.99 Aligned_cols=40 Identities=13% Similarity=0.016 Sum_probs=36.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
-+++|++.+.++.|+ .++++.++|+-....+..+...+++
T Consensus 44 v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~~~~~il~~l~~ 83 (148)
T smart00577 44 VKKRPGVDEFLKRAS-ELFELVVFTAGLRMYADPVLDLLDP 83 (148)
T ss_pred EEECCCHHHHHHHHH-hccEEEEEeCCcHHHHHHHHHHhCc
Confidence 357999999999999 5799999999999999998888876
|
|
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.3 Score=53.35 Aligned_cols=43 Identities=7% Similarity=0.226 Sum_probs=33.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhH---HHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---a~~ia~~~gi~ 653 (1104)
..++-+++.+.++.+++.|+++.++|++.... +....+..|+-
T Consensus 116 ~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~ 161 (266)
T TIGR01533 116 QAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFP 161 (266)
T ss_pred CCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcC
Confidence 34577999999999999999999999987443 33445566763
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.77 Score=47.16 Aligned_cols=38 Identities=11% Similarity=0.185 Sum_probs=32.8
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
+.+.+.+.+|+++|+.|+.+|......-...-+++|+-
T Consensus 26 ~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~ 63 (274)
T COG3769 26 QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQ 63 (274)
T ss_pred CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCC
Confidence 34678999999999999999999888888888888875
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=93.61 E-value=2.2 Score=46.45 Aligned_cols=50 Identities=12% Similarity=0.170 Sum_probs=40.3
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcC---CCHhHHHHHHHHcCCCCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~ 655 (1104)
|.+--.+.+-+++.++|+.|+++|++++++|| +.........++.|+-..
T Consensus 10 Gtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~ 62 (249)
T TIGR01457 10 GTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPAT 62 (249)
T ss_pred CceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 33444566667999999999999999999996 778888888888987443
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.58 E-value=0.21 Score=50.95 Aligned_cols=40 Identities=15% Similarity=0.270 Sum_probs=33.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC-HhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~ta~~ia~~~gi 652 (1104)
.+.++++++++.|++.|+++.++|+.+ ...+..+++.+|+
T Consensus 43 ~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 43 EAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHcCC
Confidence 578999999999999999999999987 5666666666665
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 [] | Back alignment and domain information |
|---|
Probab=93.34 E-value=1.6 Score=46.67 Aligned_cols=42 Identities=12% Similarity=0.208 Sum_probs=36.9
Q ss_pred cCCCChHHHHHHH--HHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 613 RLQDGVPETIETL--RKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 613 ~lr~~~~~~I~~l--~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
|+.++.+++++.+ ++.|+.+.++|.-+..-...+-+.-|+..
T Consensus 71 p~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~~~gl~~ 114 (234)
T PF06888_consen 71 PIDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILEHHGLRD 114 (234)
T ss_pred CCCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHHhCCCcc
Confidence 4789999999999 56899999999999998888999888743
|
It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity |
| >TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.21 Score=52.58 Aligned_cols=39 Identities=8% Similarity=0.133 Sum_probs=31.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++-+++.++++.|+++|+++.++|+-... +.......|+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~-~~~~l~~~~l 143 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSR-LRGLLEALGL 143 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchh-HHHHHHHCCc
Confidence 57899999999999999999999986543 4556666666
|
Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes. |
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=93.23 E-value=0.29 Score=48.59 Aligned_cols=27 Identities=30% Similarity=0.442 Sum_probs=24.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK 639 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~ 639 (1104)
++.+++.++++.|+++|+++.++|+..
T Consensus 27 ~~~~g~~~~l~~Lk~~g~~~~I~Sn~~ 53 (147)
T TIGR01656 27 QLRPGAVPALLTLRAAGYTVVVVTNQS 53 (147)
T ss_pred EEcCChHHHHHHHHHCCCEEEEEeCCC
Confidence 468999999999999999999999875
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=92.90 E-value=0.23 Score=47.96 Aligned_cols=39 Identities=13% Similarity=0.199 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC-CHhHHHHHHHHcC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD-KQNTAIQIALSCN 651 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD-~~~ta~~ia~~~g 651 (1104)
++.+++.++++.|+++|+++.++|+. ....+..+.+..+
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68899999999999999999999999 6776666665555
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E | Back alignment and domain information |
|---|
Probab=92.56 E-value=0.29 Score=48.83 Aligned_cols=40 Identities=15% Similarity=0.305 Sum_probs=33.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
+....+++.++++.|++.|+++.++|+.....+....+..
T Consensus 62 ~~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~ 101 (154)
T TIGR01549 62 EEAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLRKH 101 (154)
T ss_pred hheeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHHHH
Confidence 3345589999999999999999999999988877666553
|
HAD subfamilies caused by an overly broad single model. |
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=92.47 E-value=0.55 Score=48.19 Aligned_cols=48 Identities=19% Similarity=0.223 Sum_probs=32.9
Q ss_pred CCeEEEEcCCccChhhhhhcCceE--Ee-cCCchHHHh-hhcceecccchhh
Q 001304 744 DYRTLAIGDGGNDVRMIQKADIGV--GI-SGREGLQAA-RAADYSIGKFRFL 791 (1104)
Q Consensus 744 ~~~v~~iGDG~ND~~ml~~AdvGI--am-~g~~~~~a~-~~AD~vl~~f~~l 791 (1104)
...++||||..+|+.+=+.|++.. ++ .|....... ..+|+++.++..|
T Consensus 123 ~~~~v~VGDs~~Di~aA~~aG~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 123 MAQSYMVGDKLEDMQAGVAAKVKTNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred hhhEEEEcCCHHHHHHHHHCCCcEEEEEecCCcccccccccCCEEeccHHHh
Confidence 467999999999999999999953 33 232221122 2489888775543
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.19 Score=50.68 Aligned_cols=26 Identities=38% Similarity=0.639 Sum_probs=23.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++-+++.++++.|+++|+++.++|..
T Consensus 29 ~~~pgv~e~L~~L~~~g~~l~IvSN~ 54 (161)
T TIGR01261 29 RFEKGVIPALLKLKKAGYKFVMVTNQ 54 (161)
T ss_pred eECCCHHHHHHHHHHCCCeEEEEeCC
Confidence 36799999999999999999999975
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=92.06 E-value=0.59 Score=61.58 Aligned_cols=135 Identities=11% Similarity=0.052 Sum_probs=83.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+|+.+.++.|+++|+++.++|+-....+..+.+..|+....-+ .++..+
T Consensus 161 ~~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~~~L~~~gl~~~~Fd-~iv~~~--------------------------- 212 (1057)
T PLN02919 161 IGFPGALELITQCKNKGLKVAVASSADRIKVDANLAAAGLPLSMFD-AIVSAD--------------------------- 212 (1057)
T ss_pred ccCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHHcCCChhHCC-EEEECc---------------------------
Confidence 3679999999999999999999999999888888888887311000 011000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH--HHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-Ee
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK--~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am 769 (1104)
-+.+.-|+-. ..+.+.+.-..+.+++|||..+|+.+-+.|++-. ++
T Consensus 213 -------------------------------~~~~~KP~Pe~~~~a~~~lgv~p~e~v~IgDs~~Di~AA~~aGm~~I~v 261 (1057)
T PLN02919 213 -------------------------------AFENLKPAPDIFLAAAKILGVPTSECVVIEDALAGVQAARAAGMRCIAV 261 (1057)
T ss_pred -------------------------------ccccCCCCHHHHHHHHHHcCcCcccEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 0001122111 1223333334567999999999999999999854 44
Q ss_pred c-CCchHHHh-hhcceecccchhhHHH-HHhhhhhhhhhh
Q 001304 770 S-GREGLQAA-RAADYSIGKFRFLKRL-ILVHGRYSYNRT 806 (1104)
Q Consensus 770 ~-g~~~~~a~-~~AD~vl~~f~~l~~l-ll~~GR~~~~~i 806 (1104)
. +....+.. ..+|+++.++..+... ++.-|-..+.|.
T Consensus 262 ~~~~~~~~L~~~~a~~vi~~l~el~~~~~~~~~~~~~~~~ 301 (1057)
T PLN02919 262 TTTLSEEILKDAGPSLIRKDIGNISLSDILTGGSDATPNV 301 (1057)
T ss_pred CCCCCHHHHhhCCCCEEECChHHCCHHHHHhcCCCCCCCc
Confidence 2 22222222 3678999888776433 233344444443
|
|
| >PRK10563 6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.69 E-value=0.27 Score=52.52 Aligned_cols=39 Identities=5% Similarity=0.077 Sum_probs=31.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
-++.++++++++.| ++++.++|+.....+...-+..|+.
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~~~~~~~~~l~~~~l~ 125 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNGPVSKMQHSLGKTGML 125 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCCcHHHHHHHHHhcChH
Confidence 34678999999998 4999999999887777777777763
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.35 E-value=3.5 Score=44.89 Aligned_cols=47 Identities=19% Similarity=0.268 Sum_probs=40.3
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH---cCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS---CNF 652 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~---~gi 652 (1104)
|.+--.+.+-+++.++|+.|+++|++++++||+...+...++++ +|+
T Consensus 10 GtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 10 GVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 55556678899999999999999999999999999888777766 465
|
|
| >TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=90.89 E-value=0.86 Score=48.51 Aligned_cols=40 Identities=13% Similarity=0.171 Sum_probs=32.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
+-++.+++.++++.|+++|+++.++|..+......+....
T Consensus 93 ~~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~~~ 132 (220)
T TIGR01691 93 TSHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFGHS 132 (220)
T ss_pred ccCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHhhc
Confidence 4568999999999999999999999998776655554443
|
This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities. |
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=90.20 E-value=1.1 Score=47.52 Aligned_cols=40 Identities=13% Similarity=0.259 Sum_probs=31.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhH---HHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT---AIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t---a~~ia~~~gi 652 (1104)
+.-+++.++++.+++.|++|+++|||.... +..--++.|+
T Consensus 120 paip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~nL~~~G~ 162 (229)
T TIGR01675 120 PALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLDNLINAGF 162 (229)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHHcCC
Confidence 667899999999999999999999998755 3333445565
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=89.85 E-value=1.2 Score=45.12 Aligned_cols=27 Identities=19% Similarity=0.405 Sum_probs=23.7
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
+-+++.++++.|+++|+++.++|....
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 349999999999999999999997543
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase | Back alignment and domain information |
|---|
Probab=89.29 E-value=0.44 Score=50.45 Aligned_cols=28 Identities=25% Similarity=0.351 Sum_probs=25.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
++.+++.++++.|+++|+++.++|+...
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~ 121 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFP 121 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCC
Confidence 5689999999999999999999998654
|
These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA. |
| >KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only] | Back alignment and domain information |
|---|
Probab=88.89 E-value=2.6 Score=43.52 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=33.9
Q ss_pred cCCCChHHHHHHHHHcCC-eEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGI-NFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI-~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
|+-|+..++|+.+++.|. .++++|--|......+-+..|+
T Consensus 84 P~~Pgmv~lik~~ak~g~~eliIVSDaNsfFIe~~Lea~~~ 124 (256)
T KOG3120|consen 84 PIVPGMVRLIKSAAKLGCFELIIVSDANSFFIEEILEAAGI 124 (256)
T ss_pred CCCccHHHHHHHHHhCCCceEEEEecCchhHHHHHHHHccH
Confidence 578999999999999997 9999998888777777776665
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=88.80 E-value=1.2 Score=48.12 Aligned_cols=175 Identities=14% Similarity=0.110 Sum_probs=69.5
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCc---------HHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT---------EDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 682 (1104)
.+.+++.+++++|.+.. ..|+++||+..........--++.--..++..+...+.. ..+....+...++.
T Consensus 19 ~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 98 (235)
T PF02358_consen 19 VPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGSEWTNLPADEDLEWKDEVREILEY 98 (235)
T ss_dssp ---HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-EEE-TTGGGGHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccccccccccccchHHHHHHHHHHHH
Confidence 45678889999998764 589999999998855543222221011111122222221 11111222222221
Q ss_pred ----ccccCCCCCceEEEEcch---------hHHHHHHHHHHHHHh---Hh-hhccceeeeccChhhHHHHHHHHHhc-C
Q 001304 683 ----MRITTSEPKDVAFVVDGW---------ALEIALKHYRKAFTE---LA-ILSRTAICCRVTPSQKAQLVELLKSC-D 744 (1104)
Q Consensus 683 ----~~~~~~~~~~~~lvi~g~---------~l~~~~~~~~~~f~~---l~-~~~~~~i~~r~sP~qK~~iV~~lk~~-~ 744 (1104)
..-..-+.+..++...-. ....+.+.+.+.... +. ...+..+=.|..-..|+..|+.+-+. +
T Consensus 99 ~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEvrp~~~~KG~av~~ll~~~~ 178 (235)
T PF02358_consen 99 FAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEVRPPGVNKGSAVRRLLEELP 178 (235)
T ss_dssp HHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEEE-TT--HHHHHHHHHTTS-
T ss_pred HHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEEEeCCCChHHHHHHHHHhcC
Confidence 111111234444444221 122222333332221 11 11223333333334699999977653 2
Q ss_pred ------CeEEEEcCCccChhhhhhc------CceEEecCCchHHHhhhcceeccc
Q 001304 745 ------YRTLAIGDGGNDVRMIQKA------DIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 745 ------~~v~~iGDG~ND~~ml~~A------dvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
..++++||...|-.|++.. ++||-+...+......+|+|-+.+
T Consensus 179 ~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~~~~~~t~A~y~l~~ 233 (235)
T PF02358_consen 179 FAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVSVGEKPTAASYRLDD 233 (235)
T ss_dssp --------EEEEESSHHHHHHHHTTTTS----EEEEES-----------------
T ss_pred ccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeeccccccccccccccc
Confidence 3699999999999999874 456655222222222366766544
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.53 E-value=1.3 Score=50.55 Aligned_cols=26 Identities=31% Similarity=0.477 Sum_probs=24.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++.|++.++++.|+++|+++.++|+-
T Consensus 30 ~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 30 AFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred eECcCHHHHHHHHHhCCCeEEEEECC
Confidence 57899999999999999999999983
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=88.41 E-value=0.99 Score=51.24 Aligned_cols=37 Identities=22% Similarity=0.340 Sum_probs=33.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~ 649 (1104)
++.++++++|+.|++.|+++.++|.-+...|..+.+.
T Consensus 31 ~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~~ 67 (320)
T TIGR01686 31 PLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFER 67 (320)
T ss_pred ccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHHh
Confidence 3568899999999999999999999999998888776
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=87.92 E-value=1.3 Score=48.07 Aligned_cols=48 Identities=13% Similarity=0.171 Sum_probs=37.3
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHH--HHHHHcCCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAI--QIALSCNFI 653 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~--~ia~~~gi~ 653 (1104)
|.+.-.+.+-|+++++++.|+++|+++.++|.-....+. ....+.|+.
T Consensus 17 G~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~~~~~~L~~~gl~ 66 (242)
T TIGR01459 17 GVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIFSLHKTLKSLGIN 66 (242)
T ss_pred cccccCCccCccHHHHHHHHHHCCCEEEEEeCCCCChHHHHHHHHHCCCC
Confidence 555556778999999999999999999999986554333 456777774
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.86 E-value=3.1 Score=42.46 Aligned_cols=104 Identities=18% Similarity=0.326 Sum_probs=63.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.+++..|+++|.+++|+|-- .|+.... +.+...+.....+...
T Consensus 32 ~~~g~i~al~~l~~~gy~lVvvTNQ-----------sGi~rgy-------f~~~~f~~~~~~m~~~-------------- 79 (181)
T COG0241 32 FIPGVIPALLKLQRAGYKLVVVTNQ-----------SGIGRGY-------FTEADFDKLHNKMLKI-------------- 79 (181)
T ss_pred cCccHHHHHHHHHhCCCeEEEEECC-----------CCccccC-------ccHHHHHHHHHHHHHH--------------
Confidence 5799999999999999999999953 3443221 1122222221112111
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--------hHHHHHHHHHhcC---CeEEEEcCCccChhhhhh
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--------QKAQLVELLKSCD---YRTLAIGDGGNDVRMIQK 762 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--------qK~~iV~~lk~~~---~~v~~iGDG~ND~~ml~~ 762 (1104)
|......-....+|--.|+ ..+.+.+.+++.+ ....+|||-..|..+-..
T Consensus 80 -------------------l~~~gv~id~i~~Cph~p~~~c~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~~~Dlq~a~n 140 (181)
T COG0241 80 -------------------LASQGVKIDGILYCPHHPEDNCDCRKPKPGMLLSALKEYNIDLSRSYVVGDRLTDLQAAEN 140 (181)
T ss_pred -------------------HHHcCCccceEEECCCCCCCCCcccCCChHHHHHHHHHhCCCccceEEecCcHHHHHHHHH
Confidence 1111111123444444554 3566777777754 678999999999999888
Q ss_pred cCceEEe
Q 001304 763 ADIGVGI 769 (1104)
Q Consensus 763 AdvGIam 769 (1104)
|+++ +.
T Consensus 141 ~gi~-~~ 146 (181)
T COG0241 141 AGIK-GV 146 (181)
T ss_pred CCCC-ce
Confidence 8887 44
|
|
| >PRK09456 ?-D-glucose-1-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=87.20 E-value=0.87 Score=47.72 Aligned_cols=30 Identities=20% Similarity=0.279 Sum_probs=26.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 642 (1104)
++.+++.++++.|+++|+++.++|.-+...
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~ 113 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTNRLH 113 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCchhh
Confidence 468999999999999999999999876544
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=87.01 E-value=7 Score=42.62 Aligned_cols=156 Identities=15% Similarity=0.048 Sum_probs=86.9
Q ss_pred eecccCCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEE-EecCCc-----HH-------HHHH
Q 001304 609 AIEDRLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLL-SIDGKT-----ED-------EVCR 674 (1104)
Q Consensus 609 ~i~D~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~-~~~~~~-----~~-------~~~~ 674 (1104)
-....+-++..++++.|... ..-+||+||++.........--|+---..+|... ..+|.. .+ ++..
T Consensus 36 p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~ 115 (266)
T COG1877 36 PEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAEVRDPNGKWWINLAEEADLRWLKEVAA 115 (266)
T ss_pred ccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceEEecCCCCeeEecCHHHHhhHHHHHHH
Confidence 34456778889999999877 5589999999999887766533331111112122 334432 11 2233
Q ss_pred HHHHHHHHccccCCCCCceEEEEcchhHHH------HHHH--HHHHHHhHh-hhccceeeeccChhhHHHHHHHHHh-c-
Q 001304 675 SLERVLLTMRITTSEPKDVAFVVDGWALEI------ALKH--YRKAFTELA-ILSRTAICCRVTPSQKAQLVELLKS-C- 743 (1104)
Q Consensus 675 ~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~------~~~~--~~~~f~~l~-~~~~~~i~~r~sP~qK~~iV~~lk~-~- 743 (1104)
.++.......-+.-+.+..++...-...+. .+.. ......++. ...+.+|-+|-+-..|+.+++.+.+ .
T Consensus 116 ~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~~ 195 (266)
T COG1877 116 ILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATLINELKLRVTPGKMVVELRPPGVSKGAAIKYIMDELP 195 (266)
T ss_pred HHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhccccccEEEEeCceEEEEeeCCcchHHHHHHHHhcCC
Confidence 333333333322223444454442211110 0000 000001011 1235667777777789999996654 3
Q ss_pred --CCeEEEEcCCccChhhhhhcC
Q 001304 744 --DYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 744 --~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
+..+++.||-..|-.|++..+
T Consensus 196 ~~~~~~~~aGDD~TDE~~F~~v~ 218 (266)
T COG1877 196 FDGRFPIFAGDDLTDEDAFAAVN 218 (266)
T ss_pred CCCCcceecCCCCccHHHHHhhc
Confidence 345899999999999999988
|
|
| >PHA02597 30 | Back alignment and domain information |
|---|
Probab=86.23 E-value=2.5 Score=44.05 Aligned_cols=23 Identities=13% Similarity=0.148 Sum_probs=20.6
Q ss_pred CeEEEEcCCccChhhhhhc--CceE
Q 001304 745 YRTLAIGDGGNDVRMIQKA--DIGV 767 (1104)
Q Consensus 745 ~~v~~iGDG~ND~~ml~~A--dvGI 767 (1104)
+.+++|||..+|+.+-++| ++-.
T Consensus 146 ~~~v~vgDs~~di~aA~~a~~Gi~~ 170 (197)
T PHA02597 146 RVVCFVDDLAHNLDAAHEALSQLPV 170 (197)
T ss_pred CcEEEeCCCHHHHHHHHHHHcCCcE
Confidence 4588999999999999999 9866
|
2 hypothetical protein; Provisional |
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=85.27 E-value=2.3 Score=42.09 Aligned_cols=40 Identities=15% Similarity=0.236 Sum_probs=36.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
+.-|++++=+.+++++|+++.++|.-+...+..++..+|+
T Consensus 46 ~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 46 DATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred CCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 4567888889999999999999999999999999999887
|
|
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=85.01 E-value=2.8 Score=47.34 Aligned_cols=47 Identities=32% Similarity=0.489 Sum_probs=38.9
Q ss_pred EEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHH---HHcCC
Q 001304 606 GVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA---LSCNF 652 (1104)
Q Consensus 606 G~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia---~~~gi 652 (1104)
|.+--.+.+-++++++|+.|++.|++++++|++...+...++ .++|+
T Consensus 37 Gtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 37 GVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred CCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 555556777899999999999999999999999977776666 45665
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=82.59 E-value=4.6 Score=40.78 Aligned_cols=42 Identities=14% Similarity=0.165 Sum_probs=35.4
Q ss_pred cccCCCChHHHHHHHHHcCC--eEEEEcCC-------CHhHHHHHHHHcCC
Q 001304 611 EDRLQDGVPETIETLRKAGI--NFWMLTGD-------KQNTAIQIALSCNF 652 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI--~v~mlTGD-------~~~ta~~ia~~~gi 652 (1104)
++++.++..+.+++|++.+. +|+++|.- +...|..+++.+|+
T Consensus 57 ~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgI 107 (168)
T PF09419_consen 57 EDEIPPEYAEWLNELKKQFGKDRVLIVSNSAGSSDDPDGERAEALEKALGI 107 (168)
T ss_pred cCcCCHHHHHHHHHHHHHCCCCeEEEEECCCCcccCccHHHHHHHHHhhCC
Confidence 56788999999999999987 49999986 37778888888886
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >PLN02177 glycerol-3-phosphate acyltransferase | Back alignment and domain information |
|---|
Probab=81.81 E-value=10 Score=45.58 Aligned_cols=71 Identities=18% Similarity=0.199 Sum_probs=48.2
Q ss_pred ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHHHHhhhhhhhhhhh
Q 001304 729 TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTA 807 (1104)
Q Consensus 729 sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~~~~~i~ 807 (1104)
.-++|..-++..........+.||+.||.|||+.||.+..+ +.. + -=.+..+++.+.+++-.||..+.=.-
T Consensus 173 ~Ge~Kv~rl~~~~g~~~~~~aYgDS~sD~plL~~a~e~y~V-~~~-----~--~~~~~~~~~~~~~~fhdgrl~~~p~~ 243 (497)
T PLN02177 173 VGDHKRDAVLKEFGDALPDLGLGDRETDHDFMSICKEGYMV-PRT-----K--CEPLPRNKLLSPVIFHEGRLVQRPTP 243 (497)
T ss_pred ccHHHHHHHHHHhCCCCceEEEECCccHHHHHHhCCccEEe-CCC-----C--CCcCCcccCCCceeeeCCcccCCCCH
Confidence 34567766663322112237999999999999999999998 331 1 11155667888888778998887543
|
|
| >PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=80.57 E-value=3.7 Score=42.30 Aligned_cols=35 Identities=11% Similarity=0.060 Sum_probs=30.2
Q ss_pred hHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 618 VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 618 ~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
..++++.|++. +++.++||.....+..+.+..|+.
T Consensus 92 ~~e~L~~L~~~-~~l~I~T~~~~~~~~~~l~~~~l~ 126 (188)
T PRK10725 92 LIEVVKAWHGR-RPMAVGTGSESAIAEALLAHLGLR 126 (188)
T ss_pred HHHHHHHHHhC-CCEEEEcCCchHHHHHHHHhCCcH
Confidence 46899999875 899999999999999888888873
|
|
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=80.16 E-value=10 Score=45.57 Aligned_cols=168 Identities=13% Similarity=0.100 Sum_probs=119.4
Q ss_pred ceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHHhhhhHhhc
Q 001304 20 NRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKAN 99 (1104)
Q Consensus 20 N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~~~~~~~~n 99 (1104)
+..+-..||+..+++.-.|.+|.+..++++.+..++..+....+...+..|.+++++.++.-..+-++.++|.+.++...
T Consensus 85 ~nqKyn~~tF~p~vl~~qF~~F~nlyfll~alsQ~ip~~~ig~l~ty~~pl~fvl~itl~keavdd~~r~~rd~~~Nse~ 164 (1051)
T KOG0210|consen 85 RNQKYNIFTFVPAVLFEQFKFFLNLYFLLVALSQLIPALKIGYLSTYWGPLGFVLTITLIKEAVDDLKRRRRDRELNSEK 164 (1051)
T ss_pred hhcccceEEeeHHHHHHHHHHHHHHHHHHHHHHhhCchheecchhhhhHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhh
Confidence 33445678888899999999999999999999999988877777777888999999999998889999999977554332
Q ss_pred ceE----------EEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEE------E-EeccCCCCCCc
Q 001304 100 EKE----------VWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCY------V-ETAALDGETDL 162 (1104)
Q Consensus 100 ~~~----------~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~------V-des~LtGEs~~ 162 (1104)
-.+ ..-+.-|..+.+.-.+=+|-|.|.|+.-|.- --..+.++..+|+.- | -+..++-+++.
T Consensus 165 y~~ltr~~~~~~~Ss~i~vGDvi~v~K~~RVPADmilLrTsd~s--g~~FiRTDQLDGETDWKLrl~vp~tQ~l~~~~el 242 (1051)
T KOG0210|consen 165 YTKLTRDGTRREPSSDIKVGDVIIVHKDERVPADMILLRTSDKS--GSCFIRTDQLDGETDWKLRLPVPRTQHLTEDSEL 242 (1051)
T ss_pred heeeccCCcccccccccccccEEEEecCCcCCcceEEEEccCCC--CceEEeccccCCcccceeeccchhhccCCcccch
Confidence 211 2224457778888889999999999976643 335666666566421 1 15566666555
Q ss_pred eEeeccccccCCCHhhhccceeEEEecCCC
Q 001304 163 KTRLIPAACMGMDFELLHKIKGVIECPGPD 192 (1104)
Q Consensus 163 ~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~ 192 (1104)
-.-. -..+.+.++++++-|++.....+
T Consensus 243 ~~i~---v~Ae~P~kdIh~F~Gt~~~~d~~ 269 (1051)
T KOG0210|consen 243 MEIS---VYAEKPQKDIHSFVGTFTITDSD 269 (1051)
T ss_pred heEE---EeccCcchhhHhhEEEEEEecCC
Confidence 4332 12334556788888887765544
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1104 | ||||
| 3tlm_A | 992 | Crystal Structure Of Endoplasmic Reticulum Ca2+-Atp | 2e-15 | ||
| 2dqs_A | 995 | Crystal Structure Of The Calcium Pump With Amppcp I | 5e-15 | ||
| 1kju_A | 994 | Ca2+-Atpase In The E2 State Length = 994 | 5e-15 | ||
| 3ba6_A | 994 | Structure Of The Ca2e1p Phosphoenzyme Intermediate | 3e-14 | ||
| 2zxe_A | 1028 | Crystal Structure Of The Sodium - Potassium Pump In | 4e-12 | ||
| 3b8e_A | 998 | Crystal Structure Of The Sodium-Potassium Pump Leng | 2e-11 | ||
| 3n23_A | 992 | Crystal Structure Of The High Affinity Complex Betw | 1e-10 | ||
| 3ixz_A | 1034 | Pig Gastric H+K+-Atpase Complexed With Aluminium Fl | 2e-08 | ||
| 3b8c_A | 885 | Crystal Structure Of A Plasma Membrane Proton Pump | 9e-06 | ||
| 1mhs_A | 920 | Model Of Neurospora Crassa Proton Atpase Length = 9 | 4e-04 |
| >pdb|3TLM|A Chain A, Crystal Structure Of Endoplasmic Reticulum Ca2+-Atpase (Serca) From Bovine Muscle Length = 992 | Back alignment and structure |
|
| >pdb|2DQS|A Chain A, Crystal Structure Of The Calcium Pump With Amppcp In The Absence Of Calcium Length = 995 | Back alignment and structure |
|
| >pdb|1KJU|A Chain A, Ca2+-Atpase In The E2 State Length = 994 | Back alignment and structure |
|
| >pdb|3BA6|A Chain A, Structure Of The Ca2e1p Phosphoenzyme Intermediate Of The Serca Ca2+-Atpase Length = 994 | Back alignment and structure |
|
| >pdb|2ZXE|A Chain A, Crystal Structure Of The Sodium - Potassium Pump In The E2.2k+.Pi State Length = 1028 | Back alignment and structure |
|
| >pdb|3B8E|A Chain A, Crystal Structure Of The Sodium-Potassium Pump Length = 998 | Back alignment and structure |
|
| >pdb|3N23|A Chain A, Crystal Structure Of The High Affinity Complex Between Ouabain And The E2p Form Of The Sodium-Potassium Pump Length = 992 | Back alignment and structure |
|
| >pdb|3IXZ|A Chain A, Pig Gastric H+K+-Atpase Complexed With Aluminium Fluoride Length = 1034 | Back alignment and structure |
|
| >pdb|3B8C|A Chain A, Crystal Structure Of A Plasma Membrane Proton Pump Length = 885 | Back alignment and structure |
|
| >pdb|1MHS|A Chain A, Model Of Neurospora Crassa Proton Atpase Length = 920 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1104 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 1e-39 | |
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 3e-04 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 2e-38 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 9e-05 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 1e-32 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 7e-30 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 1e-29 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 4e-12 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-10 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 8e-09 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 5e-07 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 1e-06 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 1e-06 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-06 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 1e-06 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 2e-06 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 2e-06 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 4e-06 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 6e-06 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 2e-05 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 5e-05 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 9e-05 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 2e-04 | |
| 1qzv_F | 154 | Plant photosystem I: subunit PSAF; photosynthesis, | 3e-04 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 3e-04 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 158 bits (403), Expect = 1e-39
Identities = 100/440 (22%), Positives = 142/440 (32%), Gaps = 94/440 (21%)
Query: 375 VEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVM 434
I +DKTGTLT+NRM + +T + S V+
Sbjct: 380 TSVICSDKTGTLTQNRMTVSHLWFDNHIHSADTTEDQSG----QTFDQSSETWRALCRVL 435
Query: 435 AVCNTVIPAKSKAGAILYKAQSQD------EEALVHAAAQLHMVLVNKNASILEIKFNGS 488
+CN A K+G + E AL+ + NA +
Sbjct: 436 TLCNR---AAFKSGQDAVPVPKRIVIGDASETALLKFSELTLG-----NAMGYRER---- 483
Query: 489 VLQYEILETLEFTSDRKRMSVVVK--DCHSGNISLLSKGADEAILP----YAHAGQ---- 538
+ + + F S K + D L+ KGA E +L GQ
Sbjct: 484 ---FPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPL 540
Query: 539 ---QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVC 595
F A LG R L + E +Y EA +
Sbjct: 541 DEQWREAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDVEAMNF------------ 588
Query: 596 QRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653
L G+ ++ D R VP+ + R AGI M+TGD TA IA S I
Sbjct: 589 --PTSGLSFAGLVSMIDPPR--ATVPDAVLKCRTAGIRVIMVTGDHPITAKAIAASVGII 644
Query: 654 SPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG--------WALEIA 705
S E + L + A V++G L A
Sbjct: 645 SE-------------GSETVEDIAARLRVPVDQVNRKDARACVINGMQLKDMDPSELVEA 691
Query: 706 LKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765
L+ + + R +P QK +VE + GDG ND ++KADI
Sbjct: 692 LRTH-----------PEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADI 740
Query: 766 GV--GISGREGLQAAR-AAD 782
GV GI+G + AA+ AAD
Sbjct: 741 GVAMGIAGSD---AAKNAAD 757
|
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2xzb_A 1iwc_A 1iwf_A Length = 1034 | Back alignment and structure |
|---|
Score = 43.8 bits (104), Expect = 3e-04
Identities = 24/143 (16%), Positives = 54/143 (37%), Gaps = 33/143 (23%)
Query: 37 LWEQFSRFMNQYFLLIA---CLQLWSLITPVNPASTWGPL---IFIFAV---SATKEAWD 87
Q + + + +A CL +++ +T L + + AV + +
Sbjct: 102 FARQLAGGLQ-CLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGCFGYYQ 160
Query: 88 DYNRYLSDKKANEK-----------EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCD 136
++ K+ + V++ G K I + + VG++V ++ D VP D
Sbjct: 161 EF-------KS-TNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPAD 212
Query: 137 LVLIGTSDPQGVCYVETAALDGE 159
+ ++ V+ ++L GE
Sbjct: 213 IRILQAQG----RKVDNSSLTGE 231
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 155 bits (394), Expect = 2e-38
Identities = 102/442 (23%), Positives = 144/442 (32%), Gaps = 98/442 (22%)
Query: 375 VEYILTDKTGTLTENRMIFRRCCIGG-IFYGNETGDALKDVGLLNAITSGSPDVIRFLTV 433
I +DKTGTLT+NRM I + T + A S +
Sbjct: 375 TSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTTENQSG-----AAFDKTSATWSALSRI 429
Query: 434 MAVCN--TVIPAKSKAGAILYKAQSQD--EEALVHAAAQL---HMVLVNKNASILEIKFN 486
A+CN + + D E AL+ + ++N I+EI FN
Sbjct: 430 AALCNRAVFQAGQDNVPILKRSVAG-DASESALLKCIELCCGSVQGMRDRNPKIVEIPFN 488
Query: 487 GSVLQYEILETLEFTSDRKRMSVVVK--DCHSGNISLLSKGADEAILP----YAHAGQ-- 538
S K + + L+ KGA E IL G
Sbjct: 489 ---------------STNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEE 533
Query: 539 -----QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAE 593
F A + LG R L + ED+Y E + +
Sbjct: 534 PLKEDMKEAFQNAYLELGGLGERVLGFCHFALPEDKYNEGYPFDADEPNFP--------- 584
Query: 594 VCQRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCN 651
DL +G+ A+ D R VP+ + R AGI M+TGD TA IA
Sbjct: 585 -----TTDLCFVGLMAMIDPPR--AAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAKGVG 637
Query: 652 FISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG--------WALE 703
IS +E + L + A VV G L+
Sbjct: 638 IISE-------------GNETIEDIAARLNIPIGQVNPRDAKACVVHGSDLKDLSTEVLD 684
Query: 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKA 763
L ++ + R +P QK +VE + GDG ND ++KA
Sbjct: 685 DILHYH-----------TEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKA 733
Query: 764 DIGV--GISGREGLQAAR-AAD 782
DIGV GISG + ++ AAD
Sbjct: 734 DIGVAMGISGSD---VSKQAAD 752
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A Length = 1028 | Back alignment and structure |
|---|
Score = 45.7 bits (109), Expect = 9e-05
Identities = 23/143 (16%), Positives = 48/143 (33%), Gaps = 33/143 (23%)
Query: 37 LWEQFSRFMNQYFLLIA---CLQLWSLITPVNPASTWGPL---IFIFAV---SATKEAWD 87
Q + L I C + + L + + V + +
Sbjct: 97 FCRQLFGGFS-ILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGCFSYYQ 155
Query: 88 DYNRYLSDKKANEK-----------EVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCD 136
+ K+ + + V++ G K I ++ + G++V ++ D +P D
Sbjct: 156 EA-------KS-SRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPAD 207
Query: 137 LVLIGTSDPQGVCYVETAALDGE 159
L +I C V+ ++L GE
Sbjct: 208 LRIISAHG----CKVDNSSLTGE 226
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} Length = 885 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 1e-32
Identities = 116/680 (17%), Positives = 209/680 (30%), Gaps = 185/680 (27%)
Query: 366 TAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
TAI E++A ++ + +DKTGTLT N++ + + G E L
Sbjct: 315 TAI-EEMAGMDVLCSDKTGTLTLNKLSVDKNLVEVFCKGVEKDQVLL------------- 360
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQD--EEALVHAAAQLHMVLVNKNASILEI 483
A+ + + ++QD + A+V A
Sbjct: 361 -------FAAMAS--------------RVENQDAIDAAMVGMLADPKEARAG-------- 391
Query: 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543
+ L F KR ++ D SGN +SKGA E IL A A
Sbjct: 392 --------IREVHFLPFNPVDKRTALTYID-GSGNWHRVSKGAPEQILELAKASNDLSKK 442
Query: 544 VEA-VEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602
V + +++Y++ GLR+L +A + V E +
Sbjct: 443 VLSIIDKYAERGLRSLAVARQVVPEKTKES-------------------------PGAPW 477
Query: 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA----LSCNFISPEPK 658
+ +G+ + D + ETI G+N M+TGD+ + + N
Sbjct: 478 EFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSAL 537
Query: 659 GQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAI 718
V +E+ DG+A
Sbjct: 538 LGTHKDANLASIPVEELIEK------------------ADGFA----------------- 562
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAA 778
V P K ++V+ L+ + GDG ND ++KADIG+ ++ AA
Sbjct: 563 --------GVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAVAD--ATDAA 612
Query: 779 R-AADYSIGKFRFLKRLIL------------VHGRYSYNRTAFLSQYSFYKSLLICFIQI 825
R A+D ++L + R + R Y+ Y + I +
Sbjct: 613 RGASD-----------IVLTEPGLSVIISAVLTSRAIFQRM---KNYTIYA-VSITIRIV 657
Query: 826 FFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRL 885
F + L F++ ++ + ++ TI KD + P + +L
Sbjct: 658 FGFMLIALIWEFDFSAFMVLIIAILN-DGTIM--TISKDRVK--PSPTP------DSWKL 706
Query: 886 LNPSTFAGWFG-RSLFHAIVAFVISIHVYAYEKSEMEEV---------SMVALSGCIWLQ 935
G ++ F + + + V L I Q
Sbjct: 707 KEIFATGVVLGGYQAIMTVIFFWAAHKTDFFSDTFGVRSIRDNNHELMGAVYLQVSIISQ 766
Query: 936 AFVVALETNSFTVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCSQPSYWITMFL 995
A + + S++ + ++AF I I + I + ++ + W +
Sbjct: 767 ALIFVTRSRSWSFVERPGALL-MIAFLIAQLIATLIAVYANWEF-AKI--RGIGWGWAGV 822
Query: 996 IVAAGMGPIV---ALKYFRY 1012
I + K+
Sbjct: 823 IWLYSIVTYFPLDVFKFAIR 842
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 Length = 920 | Back alignment and structure |
|---|
Score = 127 bits (320), Expect = 7e-30
Identities = 117/841 (13%), Positives = 237/841 (28%), Gaps = 256/841 (30%)
Query: 234 ACGVAVYTGNETKLGMTRGI---PEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVW 290
A V TG+ T +G + +++ + + + I ++++
Sbjct: 256 AFVVITATGDNTFVGRAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIV------- 308
Query: 291 KDTEARKQWYVLYPQEFPWYELLV---------IPLRFELLCSIMIPISIKVSLDL---- 337
W + + P ++L +P + +P + ++ +
Sbjct: 309 --------WVSSFYRSNPIVQILEFTLAITIIGVP--------VGLPAVVTTTMAVGAAY 352
Query: 338 -------VKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENR 390
V+ L +AI E LA VE + +DKTGTLT+N+
Sbjct: 353 LAKKKAIVQKL------------------------SAI-ESLAGVEILCSDKTGTLTKNK 387
Query: 391 MIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI 450
+ G + D + L + D I
Sbjct: 388 LSLHDPYTVA---GVDPEDLMLTACLAASRKKKGIDAI---------------------- 422
Query: 451 LYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVV 510
++A + + + S+L +Y++L+ F K++ V
Sbjct: 423 --------DKAFLKSLKYY-----PRAKSVLS--------KYKVLQFHPFDPVSKKVVAV 461
Query: 511 VKDCHSGNISLLSKGADEAILPYAH-----AGQQTRTFVEAVEQYSQLGLRTLCLAWREV 565
V+ G KGA +L + + + V +++ G R+L +A +
Sbjct: 462 VES-PQGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGVARKRG 520
Query: 566 EEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETL 625
E ++LG+ D + +T+
Sbjct: 521 EG---------------------------------SWEILGIMPCMDPPRHDTYKTVCEA 547
Query: 626 RKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLS---IDGKTEDEVCRSLERVLLT 682
+ G++ MLTGD A + + + + L EV +E
Sbjct: 548 KTLGLSIKMLTGDAVGIARETSRQLGLGTNIYNAERLGLGGGGDMPGSEVYDFVEA---- 603
Query: 683 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS 742
DG+A V P K +VE+L+
Sbjct: 604 --------------ADGFA-------------------------EVFPQHKYNVVEILQQ 624
Query: 743 CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR-AADYSIGKFRFLKRLILVH--- 798
Y GDG ND ++KAD G+ + G AAR AAD ++ +
Sbjct: 625 RGYLVAMTGDGVNDAPSLKKADTGIAVEG--SSDAARSAAD-----------IVFLAPGL 671
Query: 799 ---------GRYSYNRTAFLSQYSFYKSLLICFIQIFFSF-ISGLSGTSLFNSVSLMAYN 848
R ++R Y++ + I + + N ++
Sbjct: 672 GAIIDALKTSRQIFHRM-----YAYVVYRIALSIHLEIFLGLWIAILNRSLNIELVVFIA 726
Query: 849 VFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGR--SLFHAIVAF 906
+F + L I D + + L + G ++ +
Sbjct: 727 IFA-DVATL--AIAYDNAPYSQTPVKW--------NLPKLWGMSVLLGVVLAVG-TWITV 774
Query: 907 VISIHVYA---YEKSEMEEVSMVALSGCIWLQAFVVALETNSFTVFQHLAIWGNLVAFYI 963
++ ++ L + + N + + W A ++
Sbjct: 775 TTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGP-FWSSIPSWQLSGAIFL 833
Query: 964 INWIFSAIPSSGMYTIMFRLCSQPSYWITMFLIVAAGMGPIVALKYFRYTYRASKINILQ 1023
++ + + G F + I + G+ I+ Y+ N++
Sbjct: 834 VDILATCFTIWG----WFEHSDTSIVAVVRIWIFSFGIFCIMGGVYYILQDSVGFDNLMH 889
Query: 1024 Q 1024
Sbjct: 890 G 890
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... Length = 995 | Back alignment and structure |
|---|
Score = 126 bits (319), Expect = 1e-29
Identities = 89/433 (20%), Positives = 142/433 (32%), Gaps = 99/433 (22%)
Query: 375 VEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDV-------------GLLNAIT 421
I +DKTGTLT N+M + I G+ + +
Sbjct: 346 TSVICSDKTGTLTTNQMSVCKMFIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRS 405
Query: 422 SGSPDVIRFLTVMAVCN-TVIPAKSKAGAILYKAQSQD--EEALVHAAAQLHMVLVNKNA 478
++ T+ A+CN + + G Y+ + E AL ++++
Sbjct: 406 GQFDGLVELATICALCNDSSLDFNETKGV--YEKVG-EATETALTTLVEKMNVFNTEVRN 462
Query: 479 SILEIKFNGSVL----QYEILETLEFTSDRKRMSVVVKD----CHSGNISLLSKGADEAI 530
+ N + TLEF+ DRK MSV + + KGA E +
Sbjct: 463 LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGV 522
Query: 531 LP---YAHAGQQTR--------TFVEAVEQYS--QLGLRTLCLAWREVEEDEYQEWSLMF 577
+ Y G + ++++ + LR L LA R+
Sbjct: 523 IDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE------- 575
Query: 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIED--RLQDGVPETIETLRKAGINFWML 635
+ + E DL +GV + D R V +I+ R AGI M+
Sbjct: 576 --------EMVLDDSSRFMEYETDLTFVGVVGMLDPPR--KEVMGSIQLCRDAGIRVIMI 625
Query: 636 TGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAF 695
TGD + TAI I + + G+ D+ +
Sbjct: 626 TGDNKGTAIAICRRIGIFGENEEVADRAYTGREFDD-----------L----PL------ 664
Query: 696 VVDGWALEIALKHYRKAFTELA-ILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG 754
E R RV PS K+++VE L+S D T GDG
Sbjct: 665 ------------------AEQREACRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGV 706
Query: 755 NDVRMIQKADIGV 767
ND ++KA+IG+
Sbjct: 707 NDAPALKKAEIGI 719
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} Length = 170 | Back alignment and structure |
|---|
Score = 64.9 bits (159), Expect = 4e-12
Identities = 19/90 (21%), Positives = 41/90 (45%), Gaps = 12/90 (13%)
Query: 491 QYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILP---YAHAGQQTRTF---- 543
+++ ++ + F +R+RMSVVV + ++ + L+ KGA + IL +
Sbjct: 55 RWQKIDEIPFDFERRRMSVVVAE-NTEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIM 113
Query: 544 ----VEAVEQYSQLGLRTLCLAWREVEEDE 569
+ ++ GLR + +A + + E
Sbjct: 114 LRKIKRVTDTLNRQGLRVVAVATKYLPARE 143
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 63.7 bits (154), Expect = 3e-10
Identities = 87/682 (12%), Positives = 184/682 (26%), Gaps = 195/682 (28%)
Query: 99 NEKEVWVVKQGIKKLIQSQDIR--VGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAAL 156
+ + V + +D++ +I+ E D +++ G + L
Sbjct: 18 YKDILSVFEDAFVDNFDCKDVQDMPKSILSKEE-----IDHIIMSKDAVSGTLRLFWTLL 72
Query: 157 DGETDLKTRLIPAACMGMDFE-LLHKIKGVIECPGPDKDIRRFDGNLRLL----PPFIDN 211
+ ++ + + + ++++ L+ IK E P R + L F
Sbjct: 73 SKQEEMVQKFVEEV-LRINYKFLMSPIK--TEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129
Query: 212 DVC----PLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTRGIPEPKLTAVDAMIDK 267
+V L ++ +L+ LR + V + G+ G + + A+D +
Sbjct: 130 NVSRLQPYLKLRQALLE---LRPAKN---VLID-------GVL-GSGKTWV-ALDVCLSY 174
Query: 268 LTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV-----IPLRFE-- 320
F+I + N + L Q P + I LR
Sbjct: 175 KVQCKMDFKIFWL----NLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 321 ------LLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETD-------TPSHATNTA 367
LL S + V L V + + + + T T
Sbjct: 231 QAELRRLLKSKPYENCLLV-LLNV---------QNAKAWNA-FNLSCKILLTTRFKQVTD 279
Query: 368 ISEDLAQVEYILTDKTGTLT--ENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSP 425
L + TLT E + + + D L + + +P
Sbjct: 280 FLSAATTTHISLDHHSMTLTPDEVKSLLLKY------LDCRPQD------LPREVLTTNP 327
Query: 426 DVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485
+ ++I + G + V +K +I+E
Sbjct: 328 RRL----------SIIAESIRDGLATWD--------------NWKHVNCDKLTTIIESS- 362
Query: 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTFVE 545
L LE RK ++ P
Sbjct: 363 ---------LNVLEPAEYRKMF----DRL--------------SVFP------------P 383
Query: 546 AVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL--- 602
+ + L L W +V + + ++ K +L++++ + E + +
Sbjct: 384 SA----HIPTILLSLIWFDVIKSDVMV--VVNKLHKYSLVEKQPK--ESTISI-PSIYLE 434
Query: 603 ---KVLGVTAIEDRLQDGV-------PETIETLRKAGINFWML--------TGDKQNTAI 644
K+ A+ + D + + + + ++
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFR 494
Query: 645 QIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMR-----ITTSEPKDVAFVVDG 699
+ L F+ E K + D T S+ L ++ I ++PK V
Sbjct: 495 MVFLDFRFL--EQK---IRHDS-TAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNA- 547
Query: 700 WALEIALKHYRKAFTELAILSR 721
+ + E I S+
Sbjct: 548 ------ILDFLPKIEENLICSK 563
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 59.1 bits (142), Expect = 8e-09
Identities = 101/687 (14%), Positives = 175/687 (25%), Gaps = 245/687 (35%)
Query: 483 IKFNGSVLQY---EILETLE--FTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG 537
+ F QY +IL E F + KD S+LSK + I+ A
Sbjct: 7 MDFETGEHQYQYKDILSVFEDAFVDN-----FDCKDVQDMPKSILSKEEIDHIIMSKDAV 61
Query: 538 QQTRTFV--------EAVEQYSQLGLRT----LCLAWREVEEDEYQEWSLMFKEASSTLI 585
T E V+++ + LR L + E ++ S+M +
Sbjct: 62 SGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKT----EQRQPSMMTRMYIEQR- 116
Query: 586 DREWRIAEV-----CQRLEHDLKVLGVTAIEDRLQDGVPE----------------TIET 624
DR + +V RL+ + L + P ++
Sbjct: 117 DRLYNDNQVFAKYNVSRLQP------YLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV 170
Query: 625 LRKAGIN-------FWMLTGDK----------QNTAIQIA--------------LSCNFI 653
+ FW+ + Q QI L + I
Sbjct: 171 CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSI 230
Query: 654 SPEPKGQLLSIDGKTE----DEVC--RSLE------RVLLTMRITTSEPKDVAFVVDGWA 701
E + L S + V ++ ++LLT R K V +
Sbjct: 231 QAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR-----FKQVTDFLSAAT 285
Query: 702 L-EIALKHYRKAFTE---LAILSRTAICCRVT--PSQKAQLVELLKSCDYRTLAIGDGGN 755
I+L H+ T ++L + + CR P + +
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLK-YLDCRPQDLPRE---------VLTTNPRRLS---- 331
Query: 756 DVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNRTAFLSQYSFY 815
+I A D +
Sbjct: 332 ---II----------------AESIRDGL-------------------ATWDNWKHVNCD 353
Query: 816 KSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIP--VLVSTIDKDLSEGTVMQH 873
K L I+ + + +F+ +S+ + IP +L S I D+ + VM
Sbjct: 354 K--LTTIIESSLNVLEPAEYRKMFDRLSVFPPSA---HIPTILL-SLIWFDVIKSDVM-- 405
Query: 874 PQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIH-VYAYEKSEMEEVSMVALSGCI 932
++ L+ S ISI +Y K ++E AL
Sbjct: 406 -VVVNKLHKYSLVE-----KQPKEST--------ISIPSIYLELKVKLEN--EYAL---- 445
Query: 933 WLQAFVVALETNSFTVFQHLAIWGNLVAFYII-----NWIFSAIPSSGMYTIMFRLCSQP 987
H ++V Y I + Y
Sbjct: 446 ------------------H----RSIVDHYNIPKTFDSDDLIPPYLDQ-Y---------- 472
Query: 988 SYWITMFLIVAAGMGPIVAL---KYFRYTYRASKINILQQAERMGGPILS-LGTIEPQPR 1043
Y + + L + + + KI A G IL+ L ++
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKP 532
Query: 1044 AIEKDVAPLSITQPRSRSPVYEPLLSD 1070
I + P YE L++
Sbjct: 533 YICDN------------DPKYERLVNA 547
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 51.4 bits (122), Expect = 2e-06
Identities = 100/756 (13%), Positives = 201/756 (26%), Gaps = 263/756 (34%)
Query: 10 DETSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQ-----LWSLITPV 64
E + + + L L E +F+ + L+ L S I
Sbjct: 48 KEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEE------VLRINYKFLMSPIKTE 101
Query: 65 NPASTWGPLIFIFAVSATKEAWDDYNRYLSDKKANEKEVWVVKQGIKKLIQSQDIRV-GN 123
+ ++I ++D + + + ++Q + +L ++++ + G
Sbjct: 102 QRQPSMMTRMYIEQRDRL---YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDG- 157
Query: 124 IVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIK 183
++G+ G KT + C + +++ K+
Sbjct: 158 ---------------VLGS----G---------------KTWVALDVC--LSYKVQCKMD 181
Query: 184 GVI------ECPGPDKDI-------RRFDGNLRLLPPFIDNDVCPLTI-------KNTIL 223
I C P+ + + D N N L I + +
Sbjct: 182 FKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI--KLRIHSIQAELRRLLK 239
Query: 224 QSCY------LRNTEWACGVAVYTGNETKLGMTRGIPEPKLTAVDAMIDKLTGAIFVFQI 277
Y L N K+ +T T + D L+ A
Sbjct: 240 SKPYENCLLVLLNV-QNAKAWNAFNLSCKILLT--------TRFKQVTDFLSAA-----T 285
Query: 278 VVVIVLGTAGNVWKDTEARK---QWYVLYPQEFPWYELLVIPLRFELLCSIMIPISIKVS 334
I L E + ++ PQ+ P L P S +I SI+
Sbjct: 286 TTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP----RRLS-IIAESIRDG 340
Query: 335 LDLVKSLYAKFIDWD-YEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIF 393
L WD ++ ++ + T I L +E E R +F
Sbjct: 341 LAT----------WDNWKHVNCD------KLTTIIESSLNVLEP---------AEYRKMF 375
Query: 394 RRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYK 453
R +F P + IP + ++++
Sbjct: 376 DRL---SVF----------------------PP-----------SAHIP--TILLSLIWF 397
Query: 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD 513
+ + +V +LH S++E K ++ +
Sbjct: 398 DVIKSDVMVV--VNKLH------KYSLVE-------------------KQPKESTISIPS 430
Query: 514 CHSGNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREV--EEDEYQ 571
+ + L K +E L H V+ Y+ +T + D+Y
Sbjct: 431 IY---LELKVKLENEYAL---HR--------SIVDHYNI--PKTFDS-DDLIPPYLDQYF 473
Query: 572 EWSLMF--KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAG 629
+ K +R + D + L + +R
Sbjct: 474 YSHIGHHLKNIEHPERMTLFR------MVFLDFRFLE----------------QKIRHDS 511
Query: 630 INFWMLTGDKQNTAIQIALSCNFISP-EPKGQLLSIDGKTEDEVCRSLERVLLTM--RIT 686
W +G NT Q+ +I +P + + ++ L + +
Sbjct: 512 TA-WNASGSILNTLQQLKFYKPYICDNDP----------KYERLVNAILDFLPKIEENLI 560
Query: 687 TSEPKDVAFVVDGWALEIALKH-----YRKAFTELA 717
S+ D+ L IAL + +A ++
Sbjct: 561 CSKYTDL--------LRIALMAEDEAIFEEAHKQVQ 588
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A Length = 206 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 5e-07
Identities = 15/38 (39%), Positives = 19/38 (50%)
Query: 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767
K Q V KS YR +A GD ND M+ +A G+
Sbjct: 131 KDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGI 168
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* Length = 263 | Back alignment and structure |
|---|
Score = 50.5 bits (122), Expect = 1e-06
Identities = 9/47 (19%), Positives = 25/47 (53%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ + + I D + + + +E L+ G+ +L+GDK++ +++
Sbjct: 124 NGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELS 170
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} Length = 736 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 1e-06
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
D K + + +ED ++ PETI L+++GI MLTGD + TA +A
Sbjct: 542 DGKTVALLVVEDPIKSSTPETILELQQSGIEIVMLTGDSKRTAEAVA 588
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 723 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 523 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 569
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} Length = 645 | Back alignment and structure |
|---|
Score = 51.4 bits (124), Expect = 1e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 445 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 491
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I Length = 287 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 2e-06
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V G+ A+ D L++ ++ L++ GI M+TGD +A I+
Sbjct: 151 NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAIS 197
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* Length = 280 | Back alignment and structure |
|---|
Score = 49.8 bits (120), Expect = 2e-06
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647
+ +V GV A+ DR++ E I L+ GI MLTGD + A +A
Sbjct: 132 NGEVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVA 178
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A Length = 225 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 4e-06
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 733 KAQLVELLKS-CDY-RTLAIGDGGNDVRMIQKADIGVGISGREGLQA-ARAADYSIGKFR 789
K ++++LLK + + + IGDG D+ AD +G G Q A + I F
Sbjct: 158 KGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFGGNVIRQQVKDNAKWYITDFV 217
Query: 790 FL 791
L
Sbjct: 218 EL 219
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} Length = 217 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 6e-06
Identities = 25/190 (13%), Positives = 54/190 (28%), Gaps = 57/190 (30%)
Query: 602 LKVLGVTAIED-----RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656
LK + + ++ L +G E + L++ +G +
Sbjct: 59 LKNMPLKLAKEVCESLPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHL--DA 116
Query: 657 PKG-QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 715
L+ + L +T ++ + L ++
Sbjct: 117 AFSNTLIVENDA-------------LNGLVT--GH-----MMFSHSKGEMLLVLQRLL-- 154
Query: 716 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775
++ + TL +GDG ND+ M + A I + + +E L
Sbjct: 155 -----------NISKTN--------------TLVVGDGANDLSMFKHAHIKIAFNAKEVL 189
Query: 776 QAARAADYSI 785
+ A + I
Sbjct: 190 KQ--HATHCI 197
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* Length = 211 | Back alignment and structure |
|---|
Score = 46.0 bits (110), Expect = 2e-05
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
T+A+GDG ND+ M +KA + + + L+ AD I
Sbjct: 161 DTVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI 198
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} Length = 335 | Back alignment and structure |
|---|
Score = 45.5 bits (108), Expect = 5e-05
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYNR 805
T+A+GDG ND+ M+ A +GV + ++A A ++ +F L ++ + +
Sbjct: 263 NTVAVGDGANDLVMMAAAGLGVAYHAKPKVEA--KAQTAV-RFAGLGGVVCILS-AALVA 318
Query: 806 TAFLS 810
LS
Sbjct: 319 QQKLS 323
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} Length = 317 | Back alignment and structure |
|---|
Score = 44.8 bits (106), Expect = 9e-05
Identities = 23/190 (12%), Positives = 48/190 (25%), Gaps = 57/190 (30%)
Query: 602 LKVLGVTAIED-----RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656
LK + L G+ + ++ G +++G ++
Sbjct: 163 LKGTPKAVLNAVCDRMTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQL--DY 220
Query: 657 PKG-QLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTE 715
+ D LT IT P +++ + L
Sbjct: 221 AFSNTVEIRDNV-------------LTDNIT--LP-----IMNAANKKQTLVDLAARL-- 258
Query: 716 LAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775
+ +A GDG ND+ M++ A G+ + +
Sbjct: 259 -----------NIATEN--------------IIACGDGANDLPMLEHAGTGIAWKAKPVV 293
Query: 776 QAARAADYSI 785
+ + I
Sbjct: 294 RE--KIHHQI 301
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 Length = 236 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 8/34 (23%), Positives = 15/34 (44%)
Query: 733 KAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766
K ++ L + + IGD DV + +D+
Sbjct: 152 KPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLC 185
|
| >1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant photosynthetic reaction center, peripheral antenna; HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1 Length = 154 | Back alignment and structure |
|---|
Score = 41.9 bits (97), Expect = 3e-04
Identities = 8/31 (25%), Positives = 15/31 (48%), Gaps = 5/31 (16%)
Query: 193 KDIRRFDGNLRLLPPFIDNDVCP-LTIKNTI 222
+ +++ +L+L D P L IK T+
Sbjct: 20 QALKKLQASLKLYAD----DSAPALAIKATM 46
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} Length = 415 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 3e-04
Identities = 14/40 (35%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
+T+A+GDG ND+ M+ A +G+ + + L+ AD S+
Sbjct: 341 QTVAVGDGANDIDMLAAAGLGIAFNAKPALRE--VADASL 378
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1104 | |||
| 3ixz_A | 1034 | Potassium-transporting ATPase alpha; ION pump, H+, | 100.0 | |
| 3ar4_A | 995 | Sarcoplasmic/endoplasmic reticulum calcium ATPase; | 100.0 | |
| 2zxe_A | 1028 | Na, K-ATPase alpha subunit; membrane protein, ION | 100.0 | |
| 1mhs_A | 920 | Proton pump, plasma membrane ATPase; ION transport | 100.0 | |
| 3b8c_A | 885 | ATPase 2, plasma membrane-type; P-type ATPase, pro | 100.0 | |
| 3rfu_A | 736 | Copper efflux ATPase; alpha helical, CPC, CXXC, AT | 100.0 | |
| 3j08_A | 645 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 3j09_A | 723 | COPA, copper-exporting P-type ATPase A; copper tra | 100.0 | |
| 2yj3_A | 263 | Copper-transporting ATPase; hydrolase, P-type ATPa | 99.82 | |
| 3a1c_A | 287 | Probable copper-exporting P-type ATPase A; ATP-bin | 99.87 | |
| 2hc8_A | 113 | PACS, cation-transporting ATPase, P-type; copper, | 99.86 | |
| 3skx_A | 280 | Copper-exporting P-type ATPase B; P1B-ATPase, ATP | 99.83 | |
| 2kij_A | 124 | Copper-transporting ATPase 1; actuator, menkes dis | 99.82 | |
| 3gwi_A | 170 | Magnesium-transporting ATPase, P-type 1; P-type AT | 99.71 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 99.46 | |
| 4dw8_A | 279 | Haloacid dehalogenase-like hydrolase; HAD, putativ | 99.14 | |
| 3dnp_A | 290 | Stress response protein YHAX; structural PSI-2, pr | 99.13 | |
| 3mpo_A | 279 | Predicted hydrolase of the HAD superfamily; SGX, P | 99.1 | |
| 3mn1_A | 189 | Probable YRBI family phosphatase; structural genom | 99.08 | |
| 3dao_A | 283 | Putative phosphatse; structural genomics, joint ce | 99.07 | |
| 3pgv_A | 285 | Haloacid dehalogenase-like hydrolase; structural g | 99.04 | |
| 1l6r_A | 227 | Hypothetical protein TA0175; structural genomics, | 99.04 | |
| 3l7y_A | 304 | Putative uncharacterized protein SMU.1108C; hydrol | 98.99 | |
| 3n07_A | 195 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.86 | |
| 3ij5_A | 211 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; | 98.85 | |
| 3fzq_A | 274 | Putative hydrolase; YP_001086940.1, putative haloa | 98.85 | |
| 2pq0_A | 258 | Hypothetical conserved protein GK1056; hyopthetica | 98.84 | |
| 3ewi_A | 168 | N-acylneuraminate cytidylyltransferase; beta barre | 98.82 | |
| 3mmz_A | 176 | Putative HAD family hydrolase; structural genomics | 98.8 | |
| 1k1e_A | 180 | Deoxy-D-mannose-octulosonate 8-phosphate phosphat; | 98.79 | |
| 1rkq_A | 282 | Hypothetical protein YIDA; two domain structure wi | 98.77 | |
| 3r4c_A | 268 | Hydrolase, haloacid dehalogenase-like hydrolase; h | 98.75 | |
| 3n1u_A | 191 | Hydrolase, HAD superfamily, subfamily III A; struc | 98.73 | |
| 1rlm_A | 271 | Phosphatase; HAD family, rossman fold, hydrolase; | 98.72 | |
| 2b30_A | 301 | Pvivax hypothetical protein; SGPP, structural geno | 98.72 | |
| 3n28_A | 335 | Phosphoserine phosphatase; HAD family hydrolase, s | 98.71 | |
| 1nf2_A | 268 | Phosphatase; structural proteomics, HAD NEW fold, | 98.69 | |
| 3e8m_A | 164 | Acylneuraminate cytidylyltransferase; 2-keto-3-deo | 98.67 | |
| 1u02_A | 239 | Trehalose-6-phosphate phosphatase related protein; | 98.66 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 98.62 | |
| 1nrw_A | 288 | Hypothetical protein, haloacid dehalogenase-like h | 98.59 | |
| 1wr8_A | 231 | Phosphoglycolate phosphatase; alpha / beta core do | 98.59 | |
| 2zos_A | 249 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hal | 98.56 | |
| 2r8e_A | 188 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.49 | |
| 1l7m_A | 211 | Phosphoserine phosphatase; rossmann fold, four-hel | 98.48 | |
| 1xvi_A | 275 | MPGP, YEDP, putative mannosyl-3-phosphoglycerate p | 98.45 | |
| 3m1y_A | 217 | Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, | 98.43 | |
| 4ap9_A | 201 | Phosphoserine phosphatase; hydrolase, haloacid deh | 98.4 | |
| 3m9l_A | 205 | Hydrolase, haloacid dehalogenase-like family; HAD | 98.39 | |
| 1y8a_A | 332 | Hypothetical protein AF1437; structural genomics, | 98.39 | |
| 2rbk_A | 261 | Putative uncharacterized protein; HAD-like phospha | 98.37 | |
| 3zx4_A | 259 | MPGP, mannosyl-3-phosphoglycerate phosphatase; hyd | 98.37 | |
| 3kd3_A | 219 | Phosphoserine phosphohydrolase-like protein; csgid | 98.36 | |
| 3p96_A | 415 | Phosphoserine phosphatase SERB; ssgcid, structural | 98.32 | |
| 4ex6_A | 237 | ALNB; modified rossman fold, phosphatase, magnesiu | 98.32 | |
| 2fue_A | 262 | PMM 1, PMMH-22, phosphomannomutase 1; enzyme-produ | 98.26 | |
| 3mc1_A | 226 | Predicted phosphatase, HAD family; PSI2, NYSGXRC, | 98.24 | |
| 1te2_A | 226 | Putative phosphatase; structural genomics, phospha | 98.23 | |
| 3f9r_A | 246 | Phosphomannomutase; trypanosome glycobiology struc | 98.21 | |
| 4eze_A | 317 | Haloacid dehalogenase-like hydrolase; magnesium bi | 98.19 | |
| 2p9j_A | 162 | Hypothetical protein AQ2171; secsg, riken, PSI, st | 98.19 | |
| 3nas_A | 233 | Beta-PGM, beta-phosphoglucomutase; PSI, structural | 98.17 | |
| 2amy_A | 246 | PMM 2, phosphomannomutase 2; HS.459855, HS.313504, | 98.16 | |
| 2pib_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 98.12 | |
| 1svj_A | 156 | Potassium-transporting ATPase B chain; alpha-beta | 98.1 | |
| 3d6j_A | 225 | Putative haloacid dehalogenase-like hydrolase; str | 98.08 | |
| 1swv_A | 267 | Phosphonoacetaldehyde hydrolase; HAD enzyme superf | 98.07 | |
| 2go7_A | 207 | Hydrolase, haloacid dehalogenase-like family; stru | 98.07 | |
| 3sd7_A | 240 | Putative phosphatase; structural genomics, haloaci | 98.07 | |
| 3s6j_A | 233 | Hydrolase, haloacid dehalogenase-like family; stru | 98.06 | |
| 1rku_A | 206 | Homoserine kinase; phosphoserine phosphatase, phos | 98.04 | |
| 2wf7_A | 221 | Beta-PGM, beta-phosphoglucomutase; transition stat | 98.03 | |
| 1nnl_A | 225 | L-3-phosphoserine phosphatase; PSP, HPSP, phospho- | 97.98 | |
| 3e58_A | 214 | Putative beta-phosphoglucomutase; structu genomics | 97.98 | |
| 3iru_A | 277 | Phoshonoacetaldehyde hydrolase like protein; phosp | 97.98 | |
| 2hcf_A | 234 | Hydrolase, haloacid dehalogenase-like family; NP_6 | 97.93 | |
| 3fvv_A | 232 | Uncharacterized protein; unknown function, structu | 97.93 | |
| 3l8h_A | 179 | Putative haloacid dehalogenase-like hydrolase; HAD | 97.92 | |
| 2hsz_A | 243 | Novel predicted phosphatase; structural genomics, | 97.91 | |
| 3um9_A | 230 | Haloacid dehalogenase, type II; haloacid dehalogen | 97.89 | |
| 3kzx_A | 231 | HAD-superfamily hydrolase, subfamily IA, variant; | 97.87 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 97.85 | |
| 3nuq_A | 282 | Protein SSM1, putative nucleotide phosphatase; sup | 97.85 | |
| 4gxt_A | 385 | A conserved functionally unknown protein; structur | 97.83 | |
| 2om6_A | 235 | Probable phosphoserine phosphatase; rossmann fold, | 97.82 | |
| 2nyv_A | 222 | Pgpase, PGP, phosphoglycolate phosphatase; structu | 97.82 | |
| 3umb_A | 233 | Dehalogenase-like hydrolase; 2.20A {Ralstonia sola | 97.81 | |
| 3u26_A | 234 | PF00702 domain protein; structural genomics, PSI-b | 97.79 | |
| 4eek_A | 259 | Beta-phosphoglucomutase-related protein; hydrolase | 97.77 | |
| 2hdo_A | 209 | Phosphoglycolate phosphatase; NP_784602.1, structu | 97.77 | |
| 2hoq_A | 241 | Putative HAD-hydrolase PH1655; haloacid dehalogena | 97.77 | |
| 2no4_A | 240 | (S)-2-haloacid dehalogenase IVA; HAD superfamily, | 97.75 | |
| 3qnm_A | 240 | Haloacid dehalogenase-like hydrolase; structural g | 97.72 | |
| 3ddh_A | 234 | Putative haloacid dehalogenase-like family hydrol; | 97.72 | |
| 2fea_A | 236 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 97.71 | |
| 3l5k_A | 250 | Protein GS1, haloacid dehalogenase-like hydrolase | 97.71 | |
| 3dv9_A | 247 | Beta-phosphoglucomutase; structural genomics, APC6 | 97.68 | |
| 3qxg_A | 243 | Inorganic pyrophosphatase; hydrolase, magnesium bi | 97.64 | |
| 2hi0_A | 240 | Putative phosphoglycolate phosphatase; YP_619066.1 | 97.63 | |
| 1zrn_A | 232 | L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseud | 97.62 | |
| 2qlt_A | 275 | (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, sac | 97.58 | |
| 2ah5_A | 210 | COG0546: predicted phosphatases; MCSG, structural | 97.57 | |
| 3pdw_A | 266 | Uncharacterized hydrolase YUTF; structural genomic | 97.54 | |
| 3ed5_A | 238 | YFNB; APC60080, bacillus subtilis subsp. subtilis | 97.53 | |
| 2fdr_A | 229 | Conserved hypothetical protein; SAD, structural ge | 97.52 | |
| 3qgm_A | 268 | P-nitrophenyl phosphatase (PHO2); structural genom | 97.51 | |
| 3umc_A | 254 | Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeru | 97.5 | |
| 3umg_A | 254 | Haloacid dehalogenase; defluorinase, hydrolase; 2. | 97.46 | |
| 2fi1_A | 190 | Hydrolase, haloacid dehalogenase-like family; stru | 97.45 | |
| 2w43_A | 201 | Hypothetical 2-haloalkanoic acid dehalogenase; hyd | 97.43 | |
| 3k1z_A | 263 | Haloacid dehalogenase-like hydrolase domain-conta | 97.4 | |
| 1qq5_A | 253 | Protein (L-2-haloacid dehalogenase); hydrolase; 1. | 97.39 | |
| 2pke_A | 251 | Haloacid delahogenase-like family hydrolase; NP_63 | 97.32 | |
| 2gmw_A | 211 | D,D-heptose 1,7-bisphosphate phosphatase; Zn-bindi | 97.32 | |
| 3smv_A | 240 | S-(-)-azetidine-2-carboxylate hydrolase; haloacid | 97.27 | |
| 2wm8_A | 187 | MDP-1, magnesium-dependent phosphatase 1; haloacid | 97.25 | |
| 2x4d_A | 271 | HLHPP, phospholysine phosphohistidine inorganic py | 97.25 | |
| 3epr_A | 264 | Hydrolase, haloacid dehalogenase-like family; stru | 97.14 | |
| 1vjr_A | 271 | 4-nitrophenylphosphatase; TM1742, structural genom | 97.09 | |
| 3ib6_A | 189 | Uncharacterized protein; structural genomics, unkn | 97.06 | |
| 2o2x_A | 218 | Hypothetical protein; structural genomics, joint c | 96.85 | |
| 3cnh_A | 200 | Hydrolase family protein; NP_295428.1, predicted h | 96.79 | |
| 2i6x_A | 211 | Hydrolase, haloacid dehalogenase-like family; HAD | 96.75 | |
| 3vay_A | 230 | HAD-superfamily hydrolase; rossmann fold, haloacid | 96.74 | |
| 3kbb_A | 216 | Phosphorylated carbohydrates phosphatase TM_1254; | 96.71 | |
| 2gfh_A | 260 | Haloacid dehalogenase-like hydrolase domain conta; | 96.63 | |
| 2b0c_A | 206 | Putative phosphatase; alpha-D-glucose-1-phosphate, | 96.46 | |
| 2c4n_A | 250 | Protein NAGD; nucleotide phosphatase, HAD superfam | 96.41 | |
| 2oda_A | 196 | Hypothetical protein pspto_2114; haloacid dehaloge | 96.28 | |
| 2pr7_A | 137 | Haloacid dehalogenase/epoxide hydrolase family; NP | 96.19 | |
| 1qyi_A | 384 | ZR25, hypothetical protein; structural genomics, P | 96.1 | |
| 4dcc_A | 229 | Putative haloacid dehalogenase-like hydrolase; mag | 96.06 | |
| 2oyc_A | 306 | PLP phosphatase, pyridoxal phosphate phosphatase; | 96.04 | |
| 4gib_A | 250 | Beta-phosphoglucomutase; rossmann fold, HAD-like, | 95.89 | |
| 3pct_A | 260 | Class C acid phosphatase; hydrolase, outer membran | 95.76 | |
| 2zg6_A | 220 | Putative uncharacterized protein ST2620, probable | 95.38 | |
| 2fpr_A | 176 | Histidine biosynthesis bifunctional protein HISB; | 95.2 | |
| 2p11_A | 231 | Hypothetical protein; putative haloacid dehalogena | 95.16 | |
| 3ocu_A | 262 | Lipoprotein E; hydrolase, outer membrane; HET: NMN | 94.98 | |
| 2kmv_A | 185 | Copper-transporting ATPase 1; menkes, nucleotide b | 94.56 | |
| 3nvb_A | 387 | Uncharacterized protein; protein FKBH, protein fkb | 94.51 | |
| 2i33_A | 258 | Acid phosphatase; HAD superfamily, hydrolase; 1.57 | 94.39 | |
| 2ho4_A | 259 | Haloacid dehalogenase-like hydrolase domain contai | 94.38 | |
| 1yns_A | 261 | E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo | 94.1 | |
| 1ltq_A | 301 | Polynucleotide kinase; phosphatase, alpha/beta, P- | 93.98 | |
| 4as2_A | 327 | Phosphorylcholine phosphatase; hydrolase, HAD supe | 91.88 | |
| 1yv9_A | 264 | Hydrolase, haloacid dehalogenase family; hypotheti | 90.83 | |
| 4g9b_A | 243 | Beta-PGM, beta-phosphoglucomutase; HAD, putative p | 90.47 | |
| 2b82_A | 211 | APHA, class B acid phosphatase; DDDD acid phosphat | 89.96 | |
| 1zjj_A | 263 | Hypothetical protein PH1952; alpha/beta hydrolase | 89.28 | |
| 2obb_A | 142 | Hypothetical protein; structural genomics, PSI-2, | 89.15 | |
| 3zvl_A | 416 | Bifunctional polynucleotide phosphatase/kinase; hy | 85.55 | |
| 3i28_A | 555 | Epoxide hydrolase 2; aromatic hydrocarbons catabol | 84.44 | |
| 4fe3_A | 297 | Cytosolic 5'-nucleotidase 3; substrate complex, HA | 80.67 |
| >3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A | Back alignment and structure |
|---|
Probab=100.00 E-value=6.3e-109 Score=1063.51 Aligned_cols=872 Identities=19% Similarity=0.186 Sum_probs=660.1
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcccc-----c---cCCcchhhHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLIT-----P---VNPASTWGPLIFIFAVSAT 82 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~-----~---~~~~~~~~~l~~i~~i~~~ 82 (1104)
+|+++||+|+++..+. ++| +.|++||.++++++++++++++++.... . .+.+...++++++++++++
T Consensus 80 ~rl~~~G~N~l~~~~~~~~~----~~~~~q~~~~~~~il~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 155 (1034)
T 3ixz_A 80 ELLLRDGPNALRPPRGTPEY----VKFARQLAGGLQCLMWVAAAICLIAFAIQASEGDLTTDDNLYLALALIAVVVVTGC 155 (1034)
T ss_pred HHHHhhCCCCCCCCCCCCHH----HHHHHHHhChHHHHHHHHHHHHHHHHHHhhccCCCccccchhhhhhhheeeeHHHH
Confidence 5889999999998876 455 8899999999998888888887654311 0 1123334566777788999
Q ss_pred HHHHHHHHHhhhh---HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCC
Q 001304 83 KEAWDDYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1104)
Q Consensus 83 ~~~~~d~~~~~~~---~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGE 159 (1104)
++++|++|+.++. +++.+++++|+|||++++|++++|||||||.|++||+|||||+|+++++ +.||||+||||
T Consensus 156 ~~~~qe~ka~~al~~L~~l~~~~a~ViRdG~~~~I~~~eLv~GDiV~l~~Gd~VPAD~~ll~~~~----l~VdES~LTGE 231 (1034)
T 3ixz_A 156 FGYYQEFKSTNIIASFKNLVPQQATVIRDGDKFQINADQLVVGDLVEMKGGDRVPADIRILQAQG----RKVDNSSLTGE 231 (1034)
T ss_pred HHHHHHHHHHHHHHHHhccCCCeeEEEECCEEEEEEHHHCCCCcEEEEcCCceecCCeEEEEeCC----ceEEecccCCC
Confidence 9999999988764 4556789999999999999999999999999999999999999998776 88999999999
Q ss_pred CCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
|.|+.|.+.. ....|++.+|++|+||.+.+| .++|+|+
T Consensus 232 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~~f~GT~v~~G-~~~~vVv 269 (1034)
T 3ixz_A 232 SEPQTRSPEC-----------------------------------------THESPLETRNIAFFSTMCLEG-TAQGLVV 269 (1034)
T ss_pred CCCeeccCCC-----------------------------------------ccccccccccceecceeEEee-cceEEEE
Confidence 9999996421 112345678999999999998 6999999
Q ss_pred EecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhH
Q 001304 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIP 316 (1104)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1104)
+||.+|.+|++.. ..+.+++|+++.+++++..+..+++++++++++++..+ ..+|...+..+
T Consensus 270 ~tG~~T~~GkI~~~~~~~~~~~tpl~~~~~~~~~~l~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~ 334 (1034)
T 3ixz_A 270 NTGDRTIIGRIASLASGVENEKTPIAIEIEHFVDIIAGLAILFGATFFIVAMCI---------------GYTFLRAMVFF 334 (1034)
T ss_pred eehhhhHhhHHHHhhcccccCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---------------cchHHHHHHHH
Confidence 9999999998754 45678899999999999888877776666655543221 11344544433
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEE
Q 001304 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (1104)
Q Consensus 317 ~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 396 (1104)
+.+++.+||++|+++++++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 335 ---i~l~v~~iPe~Lp~~vti~la~~~~------rmak~----~~lvr~l~avE~LG~v~~IcsDKTGTLT~n~m~v~~~ 401 (1034)
T 3ixz_A 335 ---MAIVVAYVPEGLLATVTVCLSLTAK------RLASK----NCVVKNLEAVETLGSTSVICSDKTGTLTQNRMTVSHL 401 (1034)
T ss_pred ---HHHHHheeccccHHHHHHHHHHHHH------HHhhC----CeEecChHHHHhhcCCcEEEcCCCCCcccCeEEEEEE
Confidence 3478889999999998888888876 45444 4899999999999999999999999999999999999
Q ss_pred EEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCc---eeeecCCccHHHHHHHHHhcCcEE
Q 001304 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~---~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
++++..|..+....... ......++....++.++++||++.....+++. -....++|+|.|+++++.+.+...
T Consensus 402 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~lc~~a~~~~~~~~~~~~~~~~~gdp~e~All~~~~~~~~~~ 477 (1034)
T 3ixz_A 402 WFDNHIHSADTTEDQSG----QTFDQSSETWRALCRVLTLCNRAAFKSGQDAVPVPKRIVIGDASETALLKFSELTLGNA 477 (1034)
T ss_pred EECCccccccCcccccc----cccCcCCHHHHHHHHHHHHhccceeccCcCCCcccCceeccCchHHHHHHHHHHhCCCh
Confidence 99887665432111100 01112334566888999999998765433221 124478999999999998876432
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCC--CCcEEEEecChHHhhhhhhccC-----------Cch
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH--SGNISLLSKGADEAILPYAHAG-----------QQT 540 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~--~~~~~l~~KGa~e~i~~~~~~~-----------~~~ 540 (1104)
.+....|++++.+||+|+||||+++++... ++++.+|+|||||.|+++|... +..
T Consensus 478 ------------~~~~~~~~~~~~~pF~s~rk~m~~v~~~~~~~~~~~~l~~KGApe~il~~c~~~~~~~~~~~l~~~~~ 545 (1034)
T 3ixz_A 478 ------------MGYRERFPKVCEIPFNSTNKFQLSIHTLEDPRDPRHVLVMKGAPERVLERCSSILIKGQELPLDEQWR 545 (1034)
T ss_pred ------------HHHHHhCcceEEeeecCCCceEEEEEEecCCCCccEEEEEeCChHHHHHHhHHhhcCCceecCCHHHH
Confidence 233456888999999999999998887542 4789999999999999999631 113
Q ss_pred hHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHH
Q 001304 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 620 (1104)
Q Consensus 541 ~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~ 620 (1104)
+.+.+.+++++.+|+|||++|||.++++++.++..... +..+.+|+||+|+|+++++||+|+++++
T Consensus 546 ~~~~~~~~~~a~~G~RvLa~A~~~l~~~~~~~~~~~~~--------------~~~~~~e~~l~~lGlv~i~Dp~r~~~~~ 611 (1034)
T 3ixz_A 546 EAFQTAYLSLGGLGERVLGFCQLYLSEKDYPPGYAFDV--------------EAMNFPTSGLSFAGLVSMIDPPRATVPD 611 (1034)
T ss_pred HHHHHHHHHHHhcCcHhheEeEEecChhhcccccccch--------------hhhhccccCcEEEEEEeccCCCchhHHH
Confidence 55888899999999999999999998876654321100 1124568999999999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+|++|+++||+|||+|||++.||.++|+++|+..++.. ...+...... ..............+++|.
T Consensus 612 aI~~l~~aGI~vvmiTGd~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 678 (1034)
T 3ixz_A 612 AVLKCRTAGIRVIMVTGDHPITAKAIAASVGIISEGSE---------TVEDIAARLR----VPVDQVNRKDARACVINGM 678 (1034)
T ss_pred HHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCCCch---------HHHHHHHhhC----ccchhccccccceeEEecH
Confidence 99999999999999999999999999999999765321 1111111000 0000111233456788888
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhh
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA 780 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~ 780 (1104)
.+....++ .+.+....++..+|+|++|+||.++|+.+|+.|+.|+|+|||.||++||++||+||||.+++.+.++++
T Consensus 679 ~l~~~~~~---~l~~~~~~~~~~v~ar~~P~~K~~iv~~lq~~g~~V~a~GDG~ND~~mLk~A~vGIAMg~ng~d~aK~a 755 (1034)
T 3ixz_A 679 QLKDMDPS---ELVEALRTHPEMVFARTSPQQKLVIVESCQRLGAIVAVTGDGVNDSPALKKADIGVAMGIAGSDAAKNA 755 (1034)
T ss_pred hhhhCCHH---HHHHHHHhCCceEEEecCHHHHHHHHHHHHHcCCEEEEECCcHHhHHHHHHCCeeEEeCCccCHHHHHh
Confidence 77655332 222232334567999999999999999999999999999999999999999999999933777778889
Q ss_pred cceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhh
Q 001304 781 ADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVS 859 (1104)
Q Consensus 781 AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~ 859 (1104)
||+|+.++++...+ .+.|||++|+|+++++.|.+++|+...++.+++.++. ...++.++|++|+|++++.+|++++
T Consensus 756 AD~Vl~~~~~~gI~~ai~~GR~i~~ni~k~i~~~l~~ni~~~~~~~~~~~~~---~~~pl~~~qiL~inl~~d~~palal 832 (1034)
T 3ixz_A 756 ADMILLDDNFASIVTGVEQGRLIFDNLKKSIAYTLTKNIPELTPYLIYITVS---VPLPLGCITILFIELCTDIFPSVSL 832 (1034)
T ss_pred cCEEeccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 99999998887766 3679999999999999999999998888777776653 2457999999999999999999999
Q ss_pred hccCCCCchhhccCCccccccc-cCcccCchhhHHHHH-HHHHHHHHHHHHhhhee---ec------------ccc---c
Q 001304 860 TIDKDLSEGTVMQHPQILFYCQ-AGRLLNPSTFAGWFG-RSLFHAIVAFVISIHVY---AY------------EKS---E 919 (1104)
Q Consensus 860 ~~~~~~~~~~~~~~p~~y~~~~-~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~---~~------------~~~---~ 919 (1104)
++| ++++++|++||+ .+ .+.+++..+++..++ .++++++..++..+..+ ++ ... .
T Consensus 833 ~~e--~~~~~~m~~~Pr---~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 907 (1034)
T 3ixz_A 833 AYE--KAESDIMHLRPR---NPKRDRLVNEPLAAYSYFQIGAIQSFAGFTDYFTAMAQEGWFPLLCVGLRPQWENHHLQD 907 (1034)
T ss_pred hcC--CCChhhhhCCCC---CCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccccccccccc
Confidence 998 589999999994 33 567888887765443 46666655444333211 00 000 0
Q ss_pred -----------------ceeeeehhhhH---HHHHHHHhhhhcccc-ch--HHHHHHHHHHHHHHHHHHHHHhhcCCchh
Q 001304 920 -----------------MEEVSMVALSG---CIWLQAFVVALETNS-FT--VFQHLAIWGNLVAFYIINWIFSAIPSSGM 976 (1104)
Q Consensus 920 -----------------~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~--~~~~~~i~~sii~~~i~~~~~~~vp~~~~ 976 (1104)
..+..+.+|++ +.+++.|+++....+ |. .+.|..+|+++++.+++++++.++|..+
T Consensus 908 ~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~q~~~~~~~r~~~~s~~~~~~~~N~~l~~~~~~~~~l~~~~~~~p~~~- 986 (1034)
T 3ixz_A 908 LQDSYGQEWTFGQRLYQQYTCYTVFFISIEMCQIADVLIRKTRRLSAFQQGFFRNRILVIAIVFQVCIGCFLCYCPGMP- 986 (1034)
T ss_pred cccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHHHhhccCCCcccccCCcccHHHHHHHHHHHHHHHHHHHhhhHH-
Confidence 00123344444 444455566554332 32 3577788888888888888888888765
Q ss_pred HHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCh
Q 001304 977 YTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTYRASK 1018 (1104)
Q Consensus 977 ~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~~p~~ 1018 (1104)
.++++.+ ++.+|+.++++.++.++..++.|++.|.+.++-
T Consensus 987 --~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~K~~~r~~~~~~ 1027 (1034)
T 3ixz_A 987 --NIFNFMPIRFQWWLVPMPFGLLIFVYDEIRKLGVRCCPGSW 1027 (1034)
T ss_pred --HHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 4455544 888999999888989999999999988765443
|
| >3ar4_A Sarcoplasmic/endoplasmic reticulum calcium ATPase; P-type ATPase, hydrolase, calcium transport, calcium binding binding; HET: ATP TG1 PTY; 2.15A {Oryctolagus cuniculus} PDB: 2ear_A* 2eas_A* 2eat_A* 2eau_A* 2dqs_A* 2zbe_A 2zbf_A* 2zbg_A* 3ar2_A* 2zbd_A* 3ar3_A* 3ar5_A* 3ar6_A* 3ar7_A* 3ar8_A* 3ar9_A* 3n5k_A* 1kju_A 1iwo_A 1t5s_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-106 Score=1038.49 Aligned_cols=872 Identities=20% Similarity=0.245 Sum_probs=632.8
Q ss_pred ccccCCCCceeecCCC-ccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-----CcchhhHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKY-TLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVN-----PASTWGPLIFIFAVSATKEA 85 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~-~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~-----~~~~~~~l~~i~~i~~~~~~ 85 (1104)
+|+++||+|+++++|+ ++| +.|++||++++++++++++++++++.+.+.+ .+...+.++++++++++.+.
T Consensus 32 ~r~~~~G~N~l~~~~~~~~~----~~~~~qf~~~~~~~l~~~a~~s~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~ 107 (995)
T 3ar4_A 32 RHLEKYGHNELPAEEGKSLW----ELVIEQFEDLLVRILLLAACISFVLAWFEEGEETITAFVEPFVILLILIANAIVGV 107 (995)
T ss_dssp HHHHHHCCSSCCCCCCCCHH----HHHHGGGCSHHHHHHHHHHHHHHHHTTSCCSSGGGSSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCcHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhhHHHhHHhhHHHHHHHHHHH
Confidence 5888999999999775 555 8999999999999999999999887654321 11112334455567788899
Q ss_pred HHHHHHhhh---hHhhcceEEEEEECCe--EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCC
Q 001304 86 WDDYNRYLS---DKKANEKEVWVVKQGI--KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGET 160 (1104)
Q Consensus 86 ~~d~~~~~~---~~~~n~~~~~V~r~g~--~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs 160 (1104)
++++|..++ .+++.+.+++|+|||+ .++|+++||+|||||.|++||+|||||+|++.+ .|.|+||||+|||||
T Consensus 108 ~qe~~a~~al~~L~~~~~~~a~V~R~g~~~~~~I~~~~lv~GDiV~l~~Gd~IPaD~~ll~~~--s~~l~VdeS~LTGES 185 (995)
T 3ar4_A 108 WQERNAENAIEALKEYEPEMGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTGES 185 (995)
T ss_dssp HHHHHCCCHHHHHGGGSCSEEEEEBTTCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCEEEECHHHHCCC
T ss_pred HHHHHHHHHHHHHHccCCCeEEEEeCCCceEEEEEHHHCCCCCEEEECCCCcccccEEEEEEe--eceEEEEcccccCCC
Confidence 999986553 4567788999999987 699999999999999999999999999997643 355999999999999
Q ss_pred CceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEE
Q 001304 161 DLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVY 240 (1104)
Q Consensus 161 ~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~ 240 (1104)
.|+.|.+... .+++..+.+.+|++|+||.+.+| +++++|++
T Consensus 186 ~pv~K~~~~~--------------------------------------~~~~~~~~~~~~~v~~GT~v~~G-~~~~~V~~ 226 (995)
T 3ar4_A 186 VSVIKHTEPV--------------------------------------PDPRAVNQDKKNMLFSGTNIAAG-KALGIVAT 226 (995)
T ss_dssp SCEEECCSCC--------------------------------------CCTTCCGGGCTTEECTTCEEEEC-EEEEEEEE
T ss_pred cceecccccc--------------------------------------CCcccCcccccceEecCCEEEcc-eEEEEEEE
Confidence 9999975321 01112234778999999999998 79999999
Q ss_pred ecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhh-hH
Q 001304 241 TGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLV-IP 316 (1104)
Q Consensus 241 tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 316 (1104)
||++|++|++.+ ..+.+++|+++.+++++..+..+++++++++++++..+.... ....+|...+. .+
T Consensus 227 tG~~T~~g~i~~~~~~~~~~~tplq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~ 297 (995)
T 3ar4_A 227 TGVSTEIGKIRDQMAATEQDKTPLQQKLDEFGEQLSKVISLICVAVWLINIGHFNDP---------VHGGSWIRGAIYYF 297 (995)
T ss_dssp CGGGSHHHHHHHHHHTCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGSC---------SSSSCHHHHHHHHH
T ss_pred cCcchHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---------cccchHHHHHHHHH
Confidence 999999998754 567788999999999999888887777766655432111000 00112322111 12
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEE
Q 001304 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (1104)
Q Consensus 317 ~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 396 (1104)
...+.+++.++|++|+++++++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 298 ~~ai~l~v~aiP~~Lp~~vt~~la~~~~------~ma~~----~~lvr~~~~iE~Lg~v~~ic~DKTGTLT~n~m~v~~~ 367 (995)
T 3ar4_A 298 KIAVALAVAAIPEGLPAVITTCLALGTR------RMAKK----NAIVRSLPSVETLGCTSVICSDKTGTLTTNQMSVCKM 367 (995)
T ss_dssp HHHHHHHHHHSCTTHHHHHHHHHHHHHH------HHHHT----TEEESCTTHHHHHHTCCEEEEESTTTTBCCCCEEEEE
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHHHHH------HhccC----CcEeccchhhhhhcCceEEEecCCCCcccCceEEEEE
Confidence 2234477889999999888888877765 45443 4899999999999999999999999999999999999
Q ss_pred EEecEEecCC--------CCcCC-Cchhhhh---h-hccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHH
Q 001304 397 CIGGIFYGNE--------TGDAL-KDVGLLN---A-ITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (1104)
Q Consensus 397 ~~~~~~~~~~--------~~~~~-~~~~~~~---~-~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~ 463 (1104)
+..+..++.. ++... ...+... . ....++.+.+++.++++||++.+...+++......+||+|.||+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~~~~~~~g~p~E~Al~ 447 (995)
T 3ar4_A 368 FIIDKVDGDFCSLNEFSITGSTYAPEGEVLKNDKPIRSGQFDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALT 447 (995)
T ss_dssp EEEEEEETTEEEEEEEEECCSSSSSCCCEEETTEECCGGGCHHHHHHHHHHHHSCCCEEEEETTTTEEEEESCHHHHHHH
T ss_pred EecCcccCcccccceeeccCCCcCCccccccccccccccccHHHHHHHHHHHHcCCCcccccCCCCceeecCCccHHHHH
Confidence 9876443310 00000 0000000 0 01123456788899999999876543222222346999999999
Q ss_pred HHHHhcCcEEEeecCcEEEEEe------CCeeEEEEEEEEeccCCCCeeEEEEEEeCCCC----cEEEEecChHHhhhhh
Q 001304 464 HAAAQLHMVLVNKNASILEIKF------NGSVLQYEILETLEFTSDRKRMSVVVKDCHSG----NISLLSKGADEAILPY 533 (1104)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~------~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~----~~~l~~KGa~e~i~~~ 533 (1104)
+++++.|+ +...... +.... ......|++++++||+|+||||||+++.++++ ++.+|+|||||.|+++
T Consensus 448 ~~a~~~g~-~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~pF~s~rk~msvi~~~~~g~~~~~~~~~~~KGa~e~il~~ 525 (995)
T 3ar4_A 448 TLVEKMNV-FNTEVRN-LSKVERANACNSVIRQLMKKEFTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDR 525 (995)
T ss_dssp HHHHHHCT-TCCCCTT-SCTTTSTTHHHHHHHHHEEEEEEEEEETTTTEEEEEEEESSCCSCSCCCEEEEEECHHHHHHT
T ss_pred HHHHHcCC-ccccccc-cccccccccchhhhhhhCceEEEeecCCCCCeeEEEEecCCCCccccceEEEEcCCHHHHHHh
Confidence 99998886 2111000 00000 00234689999999999999999999975321 6799999999999999
Q ss_pred hccC-----------CchhHHHHHHHHH--HhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcc
Q 001304 534 AHAG-----------QQTRTFVEAVEQY--SQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600 (1104)
Q Consensus 534 ~~~~-----------~~~~~~~~~~~~~--a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~ 600 (1104)
|... +..+++.++++++ +++|+|||++|||+++..+. .....+. ..++.+|+
T Consensus 526 c~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~GlRvLa~A~k~~~~~~~----------~~~~~~~-----~~~~~~e~ 590 (995)
T 3ar4_A 526 CNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALATRDTPPKRE----------EMVLDDS-----SRFMEYET 590 (995)
T ss_dssp EEEEEETTEEEECCHHHHHHHHHHHHHHHHSTTCCEEEEEEEESSCCCGG----------GCCTTCG-----GGHHHHTC
T ss_pred cchhhcCCCcccCCHHHHHHHHHHHHHHHhhhccceEEEEEEEecCcccc----------ccccccc-----hhhhhhcc
Confidence 9631 1134678889999 99999999999999864210 0011110 12457899
Q ss_pred CcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHH
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 680 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1104)
|++|+|+++++|++|++++++|+.|+++||++||+|||+..||.++|+++|+...+.. + +
T Consensus 591 ~l~~lG~~~i~D~lr~~~~~~I~~l~~~Gi~v~miTGD~~~ta~~ia~~lgi~~~~~~--i---~--------------- 650 (995)
T 3ar4_A 591 DLTFVGVVGMLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEE--V---A--------------- 650 (995)
T ss_dssp SEEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTSSCTTCC--C---T---------------
T ss_pred CcEEEEEEeecCCCchhHHHHHHHHHHcCCEEEEECCCCHHHHHHHHHHcCcCCCCCc--c---c---------------
Confidence 9999999999999999999999999999999999999999999999999999765321 0 0
Q ss_pred HHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhh
Q 001304 681 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMI 760 (1104)
Q Consensus 681 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml 760 (1104)
..+++|+.++.+.++ .+.++ ..+..+|||++|+||.++|+.+|+.|+.|+|+|||.||+|||
T Consensus 651 -------------~~~~~g~~~~~l~~~---~~~~~--~~~~~v~~r~~P~~K~~~v~~l~~~g~~v~~~GDG~ND~~al 712 (995)
T 3ar4_A 651 -------------DRAYTGREFDDLPLA---EQREA--CRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPAL 712 (995)
T ss_dssp -------------TTEEEHHHHHTSCHH---HHHHH--HHHCCEEESCCSSHHHHHHHHHHTTTCCEEEEECSGGGHHHH
T ss_pred -------------ceEEEchhhhhCCHH---HHHHH--HhhCcEEEEeCHHHHHHHHHHHHHCCCEEEEEcCCchhHHHH
Confidence 013344444332221 11111 235789999999999999999999999999999999999999
Q ss_pred hhcCceEEecCCchHHHhhhcceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhh
Q 001304 761 QKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLF 839 (1104)
Q Consensus 761 ~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~ 839 (1104)
++||+|||| |+....++++||+++.++++.... ++.|||++|+|+++++.|.+++|+...++.+++.++.. ..++
T Consensus 713 k~Advgiam-g~g~~~ak~aAd~vl~~~~~~~i~~~i~~GR~~~~~i~k~i~~~l~~Ni~~~~~~~~~~~~g~---~~pl 788 (995)
T 3ar4_A 713 KKAEIGIAM-GSGTAVAKTASEMVLADDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAALGL---PEAL 788 (995)
T ss_dssp HHSTEEEEE-TTSCHHHHHTCSEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC---CCSS
T ss_pred HHCCeEEEe-CCCCHHHHHhCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC---cchH
Confidence 999999999 644444666999999876664333 36899999999999999999999987777776665422 3568
Q ss_pred hHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccccccCcccCchhhHHHHHHHHHHHHHHHHHhhhee--eccc
Q 001304 840 NSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVY--AYEK 917 (1104)
Q Consensus 840 ~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~~ 917 (1104)
.++|++|+|+++|++|++++++| ++++.+|++||. .+.+.+++.++++.|++.+++++++.++..++.+ ....
T Consensus 789 ~~~qil~~nl~~d~~p~l~l~~~--~~~~~~m~~~P~---~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 863 (995)
T 3ar4_A 789 IPVQLLWVNLVTDGLPATALGFN--PPDLDIMDRPPR---SPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDG 863 (995)
T ss_dssp CHHHHHHHHHTTTHHHHHHHTTC--CCCTTGGGSCCC---CTTCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHTSSCSSS
T ss_pred HHHHHHHHHHHHHHHHHHhhccC--CCChhHHhCCCC---CCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999999988887 467789999884 5567899999999999999999877654322211 1000
Q ss_pred ------------------cc----------ceeeeehhhhHHHHHH---HHhhhhccccc---hHHHHHHHHHHHHHHHH
Q 001304 918 ------------------SE----------MEEVSMVALSGCIWLQ---AFVVALETNSF---TVFQHLAIWGNLVAFYI 963 (1104)
Q Consensus 918 ------------------~~----------~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~i~~sii~~~i 963 (1104)
.. ....+++.|++.++++ .++++....++ ..+.+..++.++++.++
T Consensus 864 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~f~~lv~~~~~~~~~~r~~~~~~~~~~~~~n~~l~~~~~~~~~ 943 (995)
T 3ar4_A 864 PGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMALSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMS 943 (995)
T ss_dssp CCCTTCCGGGCSSCSSCCSCCSCSCCCGGGCHHHHHHHHHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHH
T ss_pred cccccchhccccccccccccccccccccccchhhhhHHHHHHHHHHHHHHHHhhccccchhccCCccCHHHHHHHHHHHH
Confidence 00 0012334444444444 44454433322 22445555655566656
Q ss_pred HHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 964 INWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 964 ~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
+++++.++|..+ .++.+.. ++.+|+.++++.+++++...+.|++.|.|
T Consensus 944 l~~~~~~~p~~~---~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 992 (995)
T 3ar4_A 944 LHFLILYVDPLP---MIFKLKALDLTQWLMVLKISLPVIGLDEILKFIARNY 992 (995)
T ss_dssp HHHHHHHSTHHH---HHTTCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHH---HhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 666666777543 3454433 88899999998999999999999987755
|
| >2zxe_A Na, K-ATPase alpha subunit; membrane protein, ION pump, ATPase, K+ binding, haloacid dehydrogenease superfamily, phosphate analogue; HET: CLR NAG NDG; 2.40A {Squalus acanthias} PDB: 3a3y_A* 3b8e_A* 3kdp_A* 3n2f_A* 3n23_A* 1mo7_A 1mo8_A* 1q3i_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.4e-107 Score=1045.34 Aligned_cols=866 Identities=20% Similarity=0.231 Sum_probs=641.4
Q ss_pred ccccCCCCceeecCC-CccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccc----c----CCcchhhHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRK-YTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP----V----NPASTWGPLIFIFAVSAT 82 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k-~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~----~----~~~~~~~~l~~i~~i~~~ 82 (1104)
+|+++||+|+++.++ .++| +.|++||.++++++++++++++++..... . +.+...++++++++++++
T Consensus 75 ~r~~~~G~N~l~~~~~~~~~----~~~~~~~~~~~~~iL~~aa~ls~~~~~~~~~~~~~~~~~~~~~~~~i~~vv~i~~~ 150 (1028)
T 2zxe_A 75 EILARDGPNSLTPPPTTPEW----IKFCRQLFGGFSILLWIGAILCFLAYGIQAATEDEPANDNLYLGVVLSTVVIVTGC 150 (1028)
T ss_dssp HHHHHHCCSCCCCCCCCCHH----HHHHTTTTSTHHHHHHHHHHHHHHHHHHHHHSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCCCCCCHH----HHHHHHHHhHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHH
Confidence 588899999999875 4665 78999999999999988888887643110 0 112233566777888999
Q ss_pred HHHHHHHHHhhhh---HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCC
Q 001304 83 KEAWDDYNRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGE 159 (1104)
Q Consensus 83 ~~~~~d~~~~~~~---~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGE 159 (1104)
.+++|++|+.++. +++.+.+|+|+|||++++|++++|+|||||.|++||+|||||+|+++++ |+||||+||||
T Consensus 151 ~~~~qe~ka~~~~~~L~~l~~~~a~V~Rdg~~~~I~~~~Lv~GDiV~l~~Gd~IPaD~~ll~g~~----~~VdeS~LTGE 226 (1028)
T 2zxe_A 151 FSYYQEAKSSRIMDSFKNMVPQQALVIRDGEKSTINAEFVVAGDLVEVKGGDRIPADLRIISAHG----CKVDNSSLTGE 226 (1028)
T ss_dssp HHHHHTCCCCCHHHHHHTTSCSEEEEEETTEEEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEEE----EEEECHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHhhCCCeeEEEECCEEEEEEHHHCCcCCEEEECCCCEeeceEEEEeeCc----EEEEcCccCCC
Confidence 9999998876654 5567889999999999999999999999999999999999999997654 99999999999
Q ss_pred CCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEE
Q 001304 160 TDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAV 239 (1104)
Q Consensus 160 s~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv 239 (1104)
|.|+.|.+.. ....|++..|++|+||.+.+| +++|+|+
T Consensus 227 S~pv~K~~~~-----------------------------------------~~~~~~~~~n~v~~GT~v~~G-~~~~~V~ 264 (1028)
T 2zxe_A 227 SEPQTRSPEF-----------------------------------------SSENPLETRNIAFFSTNCVEG-TARGVVV 264 (1028)
T ss_dssp CSCEECCSSC-----------------------------------------CCSSTTTCSSEECTTCEEEEE-EEEEEEE
T ss_pred CcceecccCC-----------------------------------------CCCCcccccceEEeCceEEcc-eEEEEEE
Confidence 9999996431 011255788999999999998 7999999
Q ss_pred EecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhH
Q 001304 240 YTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIP 316 (1104)
Q Consensus 240 ~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (1104)
+||++|++|++.+ .++.+++++++.+++++.+++.+++++++++++++. |. ..+|...+..+
T Consensus 265 ~tG~~T~~g~i~~~~~~~~~~~t~lq~~~~~~~~~l~~~~l~~~~~~~~~~~-~~--------------~~~~~~~~~~~ 329 (1028)
T 2zxe_A 265 YTGDRTVMGRIATLASGLEVGRTPIAIEIEHFIHIITGVAVFLGVSFFILSL-IL--------------GYSWLEAVIFL 329 (1028)
T ss_dssp ECGGGSHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HT--------------TCCHHHHHHHH
T ss_pred EeccccHHHHHHHhccCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc--------------cCcHHHHHHHH
Confidence 9999999998654 567788999999999999988888777776665532 11 11344444433
Q ss_pred HHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEE
Q 001304 317 LRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRC 396 (1104)
Q Consensus 317 ~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~ 396 (1104)
++ +++.+||++|+++++++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|+++
T Consensus 330 i~---llv~~iP~~Lp~~vti~l~~~~~------~mak~----~ilvk~~~avE~Lg~v~~Ic~DKTGTLT~n~m~v~~~ 396 (1028)
T 2zxe_A 330 IG---IIVANVPEGLLATVTVCLTLTAK------RMARK----NCLVKNLEAVETLGSTSTICSDKTGTLTQNRMTVAHM 396 (1028)
T ss_dssp HH---HHHHHSCTTHHHHHHHHHHHHHH------HHHTT----TEEESSTTHHHHHHHCCEEEECCCCCCBCSSCEEEEE
T ss_pred HH---HHHHHcCchHHHHHHHHHHHHHH------HHhhC----CceeccchHhhhhcCceEEeccCCCCCCCCeEEEEEE
Confidence 33 66778999999999988888876 45443 4899999999999999999999999999999999999
Q ss_pred EEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCc---eeeecCCccHHHHHHHHHhcCcEE
Q 001304 397 CIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGA---ILYKAQSQDEEALVHAAAQLHMVL 473 (1104)
Q Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~---~~~~~~~p~e~Al~~~a~~~g~~~ 473 (1104)
++++..|..+..+.... ......++...+++.++++||++..+...++. -.+..+||+|.||++++++.+...
T Consensus 397 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~alc~~~~~~~~~~~hp~~~~~~~gdp~E~Al~~~a~~~~~~~ 472 (1028)
T 2zxe_A 397 WFDNQIHEADTTENQSG----AAFDKTSATWSALSRIAALCNRAVFQAGQDNVPILKRSVAGDASESALLKCIELCCGSV 472 (1028)
T ss_dssp EETTEEEECCCCTTCCS----CCCCSSCHHHHHHHHHHHHSCCCEECTTCTTSCGGGSCEESCHHHHHHHHHHHHHHSCH
T ss_pred EECCeeeeccCCCCccc----cccccCCHHHHHHHHHHHhcCCCeeecCCCCCccccceeCCCchHHHHHHHHHHhCCCH
Confidence 99887664321110000 00111234456788899999998765432211 113468999999999998763211
Q ss_pred EeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeC--CCCcEEEEecChHHhhhhhhccC-----------Cch
Q 001304 474 VNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDC--HSGNISLLSKGADEAILPYAHAG-----------QQT 540 (1104)
Q Consensus 474 ~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~--~~~~~~l~~KGa~e~i~~~~~~~-----------~~~ 540 (1104)
.+.+..|++++.+||+|+||||+++++.+ .++++++|+|||||.|+++|... +.+
T Consensus 473 ------------~~~~~~~~~~~~~pF~s~rk~msvi~~~~~~~~~~~~~~~KGA~e~il~~c~~~~~~g~~~~l~~~~~ 540 (1028)
T 2zxe_A 473 ------------QGMRDRNPKIVEIPFNSTNKYQLSIHENEKSSESRYLLVMKGAPERILDRCSTILLNGAEEPLKEDMK 540 (1028)
T ss_dssp ------------HHHHHHSCEEEEECCCTTTCEEEEEEECSCTTTCCEEEEEEECHHHHHTTEEEECBTTBCCBCCHHHH
T ss_pred ------------HHHHHhCceEEEeccCcccceEEEEEeccCCCCCcEEEEEeCCcHHHHHHhhhhhcCCCcccCCHHHH
Confidence 11233577889999999999999999864 25788999999999999999731 113
Q ss_pred hHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHH
Q 001304 541 RTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPE 620 (1104)
Q Consensus 541 ~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~ 620 (1104)
+.+.+++++++++|+|||++|||+++++++.++. .. +++ ..+.+|+|++|+|+++++||+|+++++
T Consensus 541 ~~~~~~~~~~a~~G~RvL~~A~~~l~~~~~~~~~--------~~-~~~-----~~~~~e~~l~~lG~i~i~Dplr~~~~~ 606 (1028)
T 2zxe_A 541 EAFQNAYLELGGLGERVLGFCHFALPEDKYNEGY--------PF-DAD-----EPNFPTTDLCFVGLMAMIDPPRAAVPD 606 (1028)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEEECCSTTSCTTC--------CC-CTT-----TTCSCCSSEEEEEEEEEECCBCTTHHH
T ss_pred HHHHHHHHHHHhcCCEEEEEEEEecCcccccccc--------cc-chh-----hhhhhhcCeEEEeeeccCCCCChhHHH
Confidence 4678889999999999999999999765432210 00 000 012357899999999999999999999
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccc-cCCCCCceEEEEcc
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRI-TTSEPKDVAFVVDG 699 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~lvi~g 699 (1104)
+|++|+++||++||+|||++.||.++|++|||...+.. ...+.... . .... ..........+++|
T Consensus 607 aI~~l~~aGI~v~miTGD~~~tA~~ia~~lgi~~~~~~---------~i~~~~~~----~-~~~~~~~~~~~~~~~vi~G 672 (1028)
T 2zxe_A 607 AVGKCRSAGIKVIMVTGDHPITAKAIAKGVGIISEGNE---------TIEDIAAR----L-NIPIGQVNPRDAKACVVHG 672 (1028)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHHHTSSCTTCC---------CHHHHHHH----T-TCCGGGSCGGGCCEEEEEH
T ss_pred HHHHHHHcCCEEEEECCCCHHHHHHHHHHcCCCCCCch---------hHHHHHhh----c-CcchhhccccccceEEEEc
Confidence 99999999999999999999999999999999765432 11111110 0 0000 01112234678888
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecC-CchHHHh
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISG-REGLQAA 778 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g-~~~~~a~ 778 (1104)
..+....++ .+.++...+...+|||++|+||..+|+.+|+.|+.|+|+|||.||+|||++||||||| | +..+.++
T Consensus 673 ~~l~~~~~~---~l~~~~~~~~~~v~ar~~P~~K~~iV~~lq~~g~~V~~iGDG~ND~paLk~AdvGIAm-g~~gtd~ak 748 (1028)
T 2zxe_A 673 SDLKDLSTE---VLDDILHYHTEIVFARTSPQQKLIIVEGCQRQGAIVAVTGDGVNDSPALKKADIGVAM-GISGSDVSK 748 (1028)
T ss_dssp HHHTTCCHH---HHHHHHHHCSEEEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-SSSCCHHHH
T ss_pred HHhhhCCHH---HHHHHHhhCCcEEEEEcCHHHHHHHHHHHHhCCCEEEEEcCCcchHHHHHhCCceEEe-CCccCHHHH
Confidence 877654332 2233333344579999999999999999999999999999999999999999999999 6 4444466
Q ss_pred hhcceecccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhh
Q 001304 779 RAADYSIGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPV 856 (1104)
Q Consensus 779 ~~AD~vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~ 856 (1104)
++||+++.++++ +..+ +.|||++|.|+++++.|.+++|+...++.+++.++.. ..+++++|++|+|++++.+|+
T Consensus 749 ~aAD~Vl~~~~~~~I~~~-i~~gR~i~~ni~k~i~~~l~~n~~~~~~~~~~~~~~~---~~~l~~~qil~inl~~d~~pa 824 (1028)
T 2zxe_A 749 QAADMILLDDNFASIVTG-VEEGRLIFDNLKKSIAYTLTSNIPEITPFLVFIIGNV---PLPLGTVTILCIDLGTDMVPA 824 (1028)
T ss_dssp HHCSEEETTCCTHHHHHH-HHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCC---CCSSCHHHHHHHHTTTTHHHH
T ss_pred HhcCEEecCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---cchhHHHHHHHHHHHHHHHHH
Confidence 799999987555 4554 6999999999999999999999987766666655422 356899999999999999999
Q ss_pred hhhhccCCCCchhhccCCccccccccCcccCchhhHH-HHHHHHHHHHHHHHHhhheee---c------------cc---
Q 001304 857 LVSTIDKDLSEGTVMQHPQILFYCQAGRLLNPSTFAG-WFGRSLFHAIVAFVISIHVYA---Y------------EK--- 917 (1104)
Q Consensus 857 ~~~~~~~~~~~~~~~~~p~~y~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~---~------------~~--- 917 (1104)
+++++|+ +++.+|++||+ ..+.+.+++.++++. ++..+++++++.|+..+..+. . ..
T Consensus 825 ~al~~e~--~~~~~m~~~Pr--~~~~~~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 900 (1028)
T 2zxe_A 825 ISLAYEQ--AESDIMKRQPR--NPKTDKLVNERLISMAYGQIGMIQALGGFFSYFVILAENGFLPMDLIGKRVRWDDRWI 900 (1028)
T ss_dssp HHGGGCC--CSSCGGGSCCC--CTTTCCSSCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHTTCCHHHHTTCHHHHSCTTC
T ss_pred HHhccCc--cchhhhccCCC--CcccccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccchhhcccchhccccc
Confidence 9999985 67889999884 223348899888776 456788988777655433211 0 00
Q ss_pred c------cc-----------eeeeehhhhHHHHHH---HHhhhhcccc-chH-HHHHHHHHHHHHHHHHHHHHhhcCCch
Q 001304 918 S------EM-----------EEVSMVALSGCIWLQ---AFVVALETNS-FTV-FQHLAIWGNLVAFYIINWIFSAIPSSG 975 (1104)
Q Consensus 918 ~------~~-----------~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~-~~~~~i~~sii~~~i~~~~~~~vp~~~ 975 (1104)
. +. ....+.+|+++++++ .++++....+ |.. +.+..++.++++.+++++++.++|..+
T Consensus 901 ~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~~v~~q~~~~~~~r~~~~~~~~~~~~n~~l~~~~~~~~~l~~~~~~~p~~~ 980 (1028)
T 2zxe_A 901 SDVEDSFGQQWTYEQRKIVEFTCHTSFFISIVVVQWADLIICKTRRNSIFQQGMKNKILIFGLFEETALAAFLSYCPGTD 980 (1028)
T ss_dssp CCEECTTSCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSSSCHHHHCSCCHHHHHHHHHHHHHHHHHHHSTTHH
T ss_pred cccccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHccCCcchhccCCcCHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 0 00 012344555555554 4455543322 211 345666666677777777778888654
Q ss_pred hHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 001304 976 MYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYFRYTY 1014 (1104)
Q Consensus 976 ~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~~~~~ 1014 (1104)
.++.+.+ ++.+|+.++.+.++.++...+.|++.|.+
T Consensus 981 ---~~f~~~~l~~~~w~~~~~~~~~~~~~~e~~k~~~r~~ 1017 (1028)
T 2zxe_A 981 ---VALRMYPLKPSWWFCAFPYSLIIFLYDEMRRFIIRRS 1017 (1028)
T ss_dssp ---HHTCCCCCCGGGGGTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred ---hhhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 3455443 88899888877888888888888877654
|
| >1mhs_A Proton pump, plasma membrane ATPase; ION transport, membrane protein, P-type ATPase, active transport, cryo-electron microscopy; 8.00A {Neurospora crassa} SCOP: i.18.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-97 Score=930.86 Aligned_cols=762 Identities=16% Similarity=0.200 Sum_probs=544.2
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhhHHHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITPVNPASTWGPLIFIFAVSATKEAWDDYNR 91 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~~~~~~~~~~l~~i~~i~~~~~~~~d~~~ 91 (1104)
+|+++||+|+++++++++| +.|++||.+++++++++.++++++.. .+.....++++++++++.++++++++
T Consensus 95 ~r~~~~G~N~l~~~~~~~~----~~~l~~f~~~~~~ll~~aai~s~~~g-----~~~~~~~i~~vv~i~~~i~~~qe~~a 165 (920)
T 1mhs_A 95 QRRRKYGLNQMKEEKENHF----LKFLGFFVGPIQFVMEGAAVLAAGLE-----DWVDFGVICGLLLLNAVVGFVQEFQA 165 (920)
T ss_dssp HHHHHTSSSSCCCCCCSSH----HHHTHHHHHHHHHHHHHHHHHCTTCS-----CSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHH-----hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999998888877 67899999999877777777766532 23334455667778899999999998
Q ss_pred hhhhHh---hcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecc
Q 001304 92 YLSDKK---ANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIP 168 (1104)
Q Consensus 92 ~~~~~~---~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~ 168 (1104)
.++.+. +.+.+++|+|||++++|++++|+|||||.|++||+|||||+|+++++ .+.||||+|||||.|+.|
T Consensus 166 ~~a~~~L~~l~~~~a~V~RdG~~~~I~~~eLv~GDiV~l~~Gd~VPaDg~ll~g~~---~l~VDES~LTGES~PV~K--- 239 (920)
T 1mhs_A 166 GSIVDELKKTLALKAVVLRDGTLKEIEAPEVVPGDILQVEEGTIIPADGRIVTDDA---FLQVDQSALTGESLAVDK--- 239 (920)
T ss_dssp HHHHHTTTTCCCSSCEEECSSSEEECCTTTSCTTSEEEECTTCBCSSEEEEEEESS---CCEEBCTTTSSCCCCEEC---
T ss_pred HHHHHHhhccCCCEEEEEECCEEEEEEHHHcCCCCEEEeCCCCccccceEEEecCc---eeeeeccccCCCCcceEe---
Confidence 876554 45678999999999999999999999999999999999999996541 279999999999999999
Q ss_pred ccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccccc
Q 001304 169 AACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLG 248 (1104)
Q Consensus 169 ~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~ 248 (1104)
..+|.+|+||.+.+| +++++|++||.+|.+|
T Consensus 240 ------------------------------------------------~~gd~v~sGT~v~~G-~~~~~V~~tG~~T~~g 270 (920)
T 1mhs_A 240 ------------------------------------------------HKGDQVFASSAVKRG-EAFVVITATGDNTFVG 270 (920)
T ss_dssp ------------------------------------------------CSSCEECSCBCCSCC-CEEEEEEECSTTCSTT
T ss_pred ------------------------------------------------cCCCeeecCceEecc-eEEEEEEEeCCcCHHH
Confidence 345789999999998 7999999999999999
Q ss_pred cccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhhhc
Q 001304 249 MTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLCSI 325 (1104)
Q Consensus 249 ~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 325 (1104)
++.+ ..+.+++++++.++++..+++++++++++++++.++ + ...++...+..++ .+++.
T Consensus 271 ~I~~lv~~a~~~~~~l~~~~~~i~~~l~~~~~~~~~i~~~~~~-~--------------~~~~~~~~l~~av---~llV~ 332 (920)
T 1mhs_A 271 RAAALVNAASGGSGHFTEVLNGIGTILLILVIFTLLIVWVSSF-Y--------------RSNPIVQILEFTL---AITII 332 (920)
T ss_dssp TTTSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-T--------------TTCCHHHHHHHHH---HHHHH
T ss_pred HHHHHHhhcccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-h--------------cCCcHHHHHHHHH---HHHHH
Confidence 9765 455678999999999998877766665555443321 1 1123444444333 36778
Q ss_pred cccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecC
Q 001304 326 MIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGN 405 (1104)
Q Consensus 326 ~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~ 405 (1104)
++|++|++.+.++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|++++..+. +
T Consensus 333 aiP~aLp~~vti~la~g~~------~mak~----~ilvk~~~aiE~Lg~v~vIc~DKTGTLT~n~m~v~~~~~~~g-~-- 399 (920)
T 1mhs_A 333 GVPVGLPAVVTTTMAVGAA------YLAKK----KAIVQKLSAIESLAGVEILCSDKTGTLTKNKLSLHDPYTVAG-V-- 399 (920)
T ss_dssp HSCCCHHHHHHHHHHHHHH------HHHHT----TCCCCCTTTHHHHHTCCEEEEETBTTTBSSCSCCCCCBCCSC-C--
T ss_pred hCchhHHHHHHHHHHHHHH------HHHhC----CeEEecCchhhhhccCcEEEECCCCCccccceeEEEEeecCC-C--
Confidence 9999999877777766665 34333 488999999999999999999999999999999988753210 0
Q ss_pred CCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEe
Q 001304 406 ETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKF 485 (1104)
Q Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~ 485 (1104)
++ .+++.+.++|+... .+ .+||+|.|+++++++.+..
T Consensus 400 ------------------~~--~~ll~~a~l~~~~~----~~------~~~P~e~Al~~~~~~~~~~------------- 436 (920)
T 1mhs_A 400 ------------------DP--EDLMLTACLAASRK----KK------GIDAIDKAFLKSLKYYPRA------------- 436 (920)
T ss_dssp ------------------CC--THHHHHHHHSCCCS----SC------SCCSHHHHHHHHHHHSSSC-------------
T ss_pred ------------------CH--HHHHHHHHHhcCCc----cc------CCChHHHHHHHHHHhcccc-------------
Confidence 00 13456667777532 11 2499999999999876531
Q ss_pred CCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCC-----chhHHHHHHHHHHhccceEEEE
Q 001304 486 NGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQ-----QTRTFVEAVEQYSQLGLRTLCL 560 (1104)
Q Consensus 486 ~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~-----~~~~~~~~~~~~a~~GlR~l~~ 560 (1104)
.+....|++++.+||+|.||+|+++++.+ +|+.++++||||+.|+++|.... ..+.+.+++++++.+|+||+++
T Consensus 437 ~~~~~~~~~~~~~pF~s~~k~ms~iv~~~-~g~~~~~~KGape~il~~c~~~~~~~~~~~~~~~~~~~~~a~~G~RvL~v 515 (920)
T 1mhs_A 437 KSVLSKYKVLQFHPFDPVSKKVVAVVESP-QGERITCVKGAPLFVLKTVEEDHPIPEEVDQAYKNKVAEFATRGFRSLGV 515 (920)
T ss_dssp CGGGSCCCEEEEEEEETTTTEEEEEECCS-SSSCEEEEEECHHHHHHHCCCSSCCCHHHHHHHHHHHHHHHTSSCCCCEE
T ss_pred hhhccccceeEEeeccCCCCeEEEEEEeC-CCcEEEEEeCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 11224577889999999999999999865 57788999999999999997532 1345778899999999999999
Q ss_pred EEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 561 AWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 561 A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
|+|.. |++++|+|+++++||+|++++++|+.|+++||+++|+|||++
T Consensus 516 A~~~~---------------------------------e~~l~~lGli~i~Dp~R~ea~~aI~~l~~aGI~v~MiTGD~~ 562 (920)
T 1mhs_A 516 ARKRG---------------------------------EGSWEILGIMPCMDPPRHDTYKTVCEAKTLGLSIKMLTGDAV 562 (920)
T ss_dssp CCCSS---------------------------------SCSCCCCBBCCCCCCCCHHHHHHHHHHHHHTCEEEEEESSCH
T ss_pred EEecc---------------------------------ccccEEEEEEEEeccccccHHHHHHHHhhcCceEEEEcCCCH
Confidence 98731 378999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhc
Q 001304 641 NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720 (1104)
Q Consensus 641 ~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~ 720 (1104)
.||.+||+++||.....+..-..++|... ++++. +. ....
T Consensus 563 ~TA~aIA~~lGI~~~~~~~~~~~~~g~~~---------------------------~~~~e-----------l~--~~~~ 602 (920)
T 1mhs_A 563 GIARETSRQLGLGTNIYNAERLGLGGGGD---------------------------MPGSE-----------VY--DFVE 602 (920)
T ss_dssp HHHHHHHHHHTSSCSCCCSSSSSSCBCCC---------------------------GGGGG-----------GG--TTTT
T ss_pred HHHHHHHHHcCCCccccCccceeecCccc---------------------------CCHHH-----------HH--HHHh
Confidence 99999999999964210000001111100 01111 11 1134
Q ss_pred cceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHH-HHhhh
Q 001304 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHG 799 (1104)
Q Consensus 721 ~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l-ll~~G 799 (1104)
+..+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||| |+....++++||+++.++++-... .+.+|
T Consensus 603 ~~~V~arv~P~~K~~iV~~Lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADiVl~~~~~~~I~~ai~~g 681 (920)
T 1mhs_A 603 AADGFAEVFPQHKYNVVEILQQRGYLVAMTGDGVNDAPSLKKADTGIAV-EGSSDAARSAADIVFLAPGLGAIIDALKTS 681 (920)
T ss_dssp TTSCEESCCSTHHHHHHHHHHTTTCCCEECCCCGGGHHHHHHSSEEEEE-TTSCHHHHHSSSEEESSCCSHHHHHHHHHH
T ss_pred hCeEEEEeCHHHHHHHHHHHHhCCCeEEEEcCCcccHHHHHhCCcCccc-ccccHHHHHhcCeEEcCCCHHHHHHHHHHH
Confidence 5679999999999999999999999999999999999999999999999 654344555999999876664333 36999
Q ss_pred hhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccc
Q 001304 800 RYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFY 879 (1104)
Q Consensus 800 R~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~ 879 (1104)
|++|+|+++++.|.++.|+.......++.. +.|.+ +++.+++|.|++.+. |++++++|+ ++.. +.|..+.
T Consensus 682 R~~~~ni~k~i~~~l~~n~~~~~~~~~~~~---~~~~~-l~~~~il~~~l~~d~-~~lal~~e~--~~~~--~~P~~~~- 751 (920)
T 1mhs_A 682 RQIFHRMYAYVVYRIALSIHLEIFLGLWIA---ILNRS-LNIELVVFIAIFADV-ATLAIAYDN--APYS--QTPVKWN- 751 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---SCSCC-CCHHHHHHHHHHHTT-HHHHCCCCC--SGGG--GSCCCCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHhcc-CCHHHHHHHHHHHHH-HhhhhcccC--cccc--cCCCCch-
Confidence 999999999999999998875433222222 23434 678899999988886 889888885 2222 3333221
Q ss_pred cccCcccCchhhHHHHHHHHHHHHHHHHHhhheeecc-cc----cceeeeehhhhHHHHHHHH---hhhhccccchHHHH
Q 001304 880 CQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYE-KS----EMEEVSMVALSGCIWLQAF---VVALETNSFTVFQH 951 (1104)
Q Consensus 880 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 951 (1104)
. ...++..+..+++.++..++..+..+... .. .....++.+|...++++.+ +++.....|....+
T Consensus 752 --~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~~f~~lv~~~~~~~~~~R~~~~~~~~~~~ 824 (920)
T 1mhs_A 752 --L-----PKLWGMSVLLGVVLAVGTWITVTTMYAQGENGGIVQNFGNMDEVLFLQISLTENWLIFITRANGPFWSSIPS 824 (920)
T ss_dssp --S-----SSCSSCHHHHHHHHHHHHHHHHHHHTTTTTTCCSSSSSSSHHHHHHHHHHHHHHHHTTSSSCSSSCSCCSCT
T ss_pred --H-----HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhHHHHHHHHHHHHHHHHHHHHhccchhhhcCchH
Confidence 1 22222233445554443322221111110 00 1112345556555555544 44443333332234
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHHHHHH
Q 001304 952 LAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAGMGPIVALKYF 1010 (1104)
Q Consensus 952 ~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~llp~~i~k~~ 1010 (1104)
+.+++++++..+++..+.++|. +.+.+ ++..|+.++++.++.++...+.|++
T Consensus 825 ~~~~~~~~~~~~~~~~~~~~~~-------f~~~~l~~~~~~~~~~~~~~~~~~~e~~k~~ 877 (920)
T 1mhs_A 825 WQLSGAIFLVDILATCFTIWGW-------FEHSDTSIVAVVRIWIFSFGIFCIMGGVYYI 877 (920)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSS-------TTSCSHHHHTHHHHHHHTTHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHhhh-------hccCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445544444444444444442 22211 5556666655555555555555543
|
| >3b8c_A ATPase 2, plasma membrane-type; P-type ATPase, proton pump, ATP-binding, hydrogen ION transport, hydrolase, ION transport; HET: ACP; 3.60A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.7e-96 Score=915.85 Aligned_cols=678 Identities=18% Similarity=0.206 Sum_probs=500.4
Q ss_pred ccccCCCCceeecCCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhccccc--cCCcchhhHHHHHHHHHHHHHHHHHH
Q 001304 12 TSQDLYCANRLSNRKYTLMNFLPKNLWEQFSRFMNQYFLLIACLQLWSLITP--VNPASTWGPLIFIFAVSATKEAWDDY 89 (1104)
Q Consensus 12 ~~~~~~g~N~i~~~k~~~~~flp~~l~~qf~~~~n~~~l~~~~l~~~~~~~~--~~~~~~~~~l~~i~~i~~~~~~~~d~ 89 (1104)
+|+++||+|+++.+++++| +.|++||.+++++++++.++++++..... ...+...+.++++++++++.++++++
T Consensus 40 ~r~~~~G~N~l~~~~~~~~----~~~l~~~~~p~~~il~~aaiis~~l~~~~~~~~~~~~~~~I~~~v~i~~~l~~~qe~ 115 (885)
T 3b8c_A 40 DRIQIFGPNKLEEKKESKL----LKFLGFMWNPLSWVMEMAAIMAIALANGDGRPPDWQDFVGIICLLVINSTISFIEEN 115 (885)
T ss_dssp HHSSSCCSCCTTTTCCCTT----SSTTSCCCGGGSSHHHHHHHGGGGSSCCTTSCSCCTTHHHHHHHTTTTTTTTTTTTT
T ss_pred HHHHhcCCCccCCCCCCHH----HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999887776 56788999999877777777777653211 01222334455556677788899998
Q ss_pred HHhhhh---HhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEee
Q 001304 90 NRYLSD---KKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1104)
Q Consensus 90 ~~~~~~---~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1104)
|+.++. +++.+.+++|+|||++++|++++|+|||||.|++||+|||||+|+++++ +.||||+|||||.|+.|.
T Consensus 116 ka~~al~~L~~~~~~~a~V~RdG~~~~I~~~~Lv~GDiV~l~~Gd~IPaDg~ll~g~~----l~VdES~LTGES~Pv~K~ 191 (885)
T 3b8c_A 116 NAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIVSIKLGDIIPADARLLEGDP----LKVDQSALTGESLPVTKH 191 (885)
T ss_dssp TTTTHHHHTTTSCSCCCCCCCSSCSCCCCTTTTCTTSBCCCCSSCCCSSCCCCCCSSC----BCCCCCSTTCCSSCCCBS
T ss_pred HHHHHHHHHhccCCCeEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeceEEEEcCc----ccccccccCCCCcceEec
Confidence 877654 4456788999999999999999999999999999999999999996553 689999999999999983
Q ss_pred ccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccc
Q 001304 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1104)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1104)
.+|.+|+||.+.+| +++++|++||.+|.
T Consensus 192 ---------------------------------------------------~g~~v~~GT~v~~G-~~~~~V~~tG~~T~ 219 (885)
T 3b8c_A 192 ---------------------------------------------------PGQEVFSGSTCKQG-EIEAVVIATGVHTF 219 (885)
T ss_dssp ---------------------------------------------------SCCCCCSCCCCCSC-CCCCBCCSCTTTTT
T ss_pred ---------------------------------------------------CCCccccCeEEeee-EEEEEEEEcCcccH
Confidence 35789999999998 79999999999999
Q ss_pred cccccCC--CCCCcChHHHHHHHHHHHHHHHH-HHHHHHHhhccccccccccccceeeccCCCcchhhhhhhHHHHHHhh
Q 001304 247 LGMTRGI--PEPKLTAVDAMIDKLTGAIFVFQ-IVVVIVLGTAGNVWKDTEARKQWYVLYPQEFPWYELLVIPLRFELLC 323 (1104)
Q Consensus 247 ~~~~~~~--~~~k~s~l~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 323 (1104)
+|++.+. ...+++++++.+++++.+++..+ +.+++++++.++ +. ..++...+.. ++.++
T Consensus 220 ~g~i~~lv~~~~~~~~lq~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~--------------~~~~~~~~~~---~v~ll 281 (885)
T 3b8c_A 220 FGKAAHLVDSTNQVGHFQKVLTAIGNFCICSIAIGMVIEIIVMYP-IQ--------------RRKYRDGIDN---LLVLL 281 (885)
T ss_dssp STTCCCSCCSCSCCSTTTTTTHHHHHHHHHHHHHHHHHHSTTTTT-TT--------------CSCSTTHHHH---HHHHT
T ss_pred HHHHHHHHhcccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-Hc--------------cCcHHHHHHH---HHHHH
Confidence 9997652 24678999999999887643322 222222222211 10 1123344433 34478
Q ss_pred hccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEe
Q 001304 324 SIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFY 403 (1104)
Q Consensus 324 ~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~ 403 (1104)
+.++|++||+.++++..+++. +|.++ ++++|+++++|+||++++||||||||||+|+|+|.++.+. .+
T Consensus 282 v~aiP~aLp~~vti~la~g~~------r~ak~----~ilvk~~~aiE~Lg~v~~Ic~DKTGTLT~n~m~v~~~~~~--~~ 349 (885)
T 3b8c_A 282 IGGIPIAMPTVLSVTMAIGSH------RLSQQ----GAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLVE--VF 349 (885)
T ss_dssp TTTCCSSTTTHHHHTTTHHHH------HHTTT----SCCCSSGGGHHHHTTCCCCEEECCCCCSCCCCCCCSCCCC--SS
T ss_pred HHHhhhHHHHHHHHHHHHHHH------HHHhC----CeEeCCchHHHHHhCCCEEEECCCCCcccCceEEEEEEEe--cc
Confidence 899999998777766665554 55544 4899999999999999999999999999999999643210 00
Q ss_pred cCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEE
Q 001304 404 GNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEI 483 (1104)
Q Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~ 483 (1104)
.. ..+..+++...++|+... .+||.|.|+++++.+..
T Consensus 350 ~~------------------~~~~~~ll~~aa~~~~~~------------~~~p~~~Al~~~~~~~~------------- 386 (885)
T 3b8c_A 350 CK------------------GVEKDQVLLFAAMASRVE------------NQDAIDAAMVGMLADPK------------- 386 (885)
T ss_dssp CS------------------STTHHHHHHHHHHHCCSS------------SCCSHHHHHHHTTCCTT-------------
T ss_pred CC------------------CCCHHHHHHHHHHHhCCC------------CCCchHHHHHHHhhchh-------------
Confidence 00 011235667778887532 47999999999875311
Q ss_pred EeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC-CchhHHHHHHHHHHhccceEEEEEE
Q 001304 484 KFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG-QQTRTFVEAVEQYSQLGLRTLCLAW 562 (1104)
Q Consensus 484 ~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~-~~~~~~~~~~~~~a~~GlR~l~~A~ 562 (1104)
.....|++++.+||+|.||||+++++.. +|+.++++|||||.++++|... ..++++.+++++++++|+||+++|+
T Consensus 387 ---~~~~~~~~~~~~pF~s~~k~~sv~~~~~-~g~~~~~~KGa~e~il~~c~~~~~~~~~~~~~~~~~a~~G~rvl~vA~ 462 (885)
T 3b8c_A 387 ---EARAGIREVHFLPFNPVDKRTALTYIDG-SGNWHRVSKGAPEQILELAKASNDLSKKVLSIIDKYAERGLRSLAVAR 462 (885)
T ss_dssp ---CCCCSSCCBCCCCCCTTTCCCCCBBCSS-SSCBCBCCCCSGGGTSSSSCCCSTTTTTHHHHHHHHTTTTCEEEEECC
T ss_pred ---hHhhcCceeecccCCcccceEEEEEEec-CCcEEEEEeCCHHHHHHhccCchhhHHHHHHHHHHHHhCCCeEEEEEE
Confidence 1123456778899999999999998864 5778899999999999999743 3356788899999999999999999
Q ss_pred EecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhH
Q 001304 563 REVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (1104)
Q Consensus 563 k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 642 (1104)
|++++++. +..|+|++|+|+++++||+|++++++|+.|+++||+++|+|||+..|
T Consensus 463 ~~~~~~~~-------------------------~~~e~~l~~lGli~i~Dp~R~~a~~aI~~l~~aGI~v~MiTGD~~~t 517 (885)
T 3b8c_A 463 QVVPEKTK-------------------------ESPGAPWEFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAI 517 (885)
T ss_dssp BCCCSSSS-------------------------SCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHTTCCCEEEESSCHHH
T ss_pred eccccccc-------------------------cccccCcEEEEEEEeecccchhHHHHHHHHHHcCCcEEEEcCCChHH
Confidence 98865321 24578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccc
Q 001304 643 AIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRT 722 (1104)
Q Consensus 643 a~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~ 722 (1104)
|.++|+++||........ .+.|.+.++. +++..++.. ..+.
T Consensus 518 A~~iA~~lGi~~~~~~~~--~l~g~~~~~~------------------------~~~~~l~~~-------------~~~~ 558 (885)
T 3b8c_A 518 GKETGRRLGMGTNMYPSS--ALLGTHKDAN------------------------LASIPVEEL-------------IEKA 558 (885)
T ss_dssp HTHHHHTTTCTTCCSTTS--SCCBGGGGTT------------------------SCCSCHHHH-------------HHTS
T ss_pred HHHHHHHhCCccccCCcc--eeeccccccc------------------------cchhHHHHH-------------HhhC
Confidence 999999999964311000 1112111100 011111111 2346
Q ss_pred eeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchhhHHH-HHhhhhh
Q 001304 723 AICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRL-ILVHGRY 801 (1104)
Q Consensus 723 ~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~~l-ll~~GR~ 801 (1104)
.+|+|++|+||.++|+.+|+.|+.|+|+|||.||+|||++||||||| |+....++++||+++.++++-... .+.+||+
T Consensus 559 ~v~arv~P~~K~~iV~~lq~~g~~Vam~GDGvNDapaLk~AdvGIAm-g~gtd~ak~aADivl~~~~~~~I~~ai~~gR~ 637 (885)
T 3b8c_A 559 DGFAGVFPEHKYEIVKKLQERKHIVGMTGDGVNDAPALKKADIGIAV-ADATDAARGASDIVLTEPGLSVIISAVLTSRA 637 (885)
T ss_dssp CCEECCCHHHHHHHHHHHHHTTCCCCBCCCSSTTHHHHHHSSSCCCC-SSSHHHHGGGCSSCCSSCSHHHHTHHHHTHHH
T ss_pred cEEEEECHHHHHHHHHHHHHCCCeEEEEcCCchhHHHHHhCCEeEEe-CCccHHHHHhcceeeccCchhHHHHHHHHHHH
Confidence 79999999999999999999999999999999999999999999999 654344455999999987764433 4689999
Q ss_pred hhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccccccc
Q 001304 802 SYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQILFYCQ 881 (1104)
Q Consensus 802 ~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y~~~~ 881 (1104)
+|+|+++.+.|.+..|+...+..++..+ ++ ..++.+++++|+|++.+..+ +.+.+|+ .++. +.|.
T Consensus 638 ~~~ni~~~i~~~l~~n~~~~~~~~~~~~--~~--~~~l~p~~il~i~l~~d~~~-l~l~~~~--~~~~--~~p~------ 702 (885)
T 3b8c_A 638 IFQRMKNYTIYAVSITIRIVFGFMLIAL--IW--EFDFSAFMVLIIAILNDGTI-MTISKDR--VKPS--PTPD------ 702 (885)
T ss_dssp HHHHHHHHHHHHHHHTTTTTSTTHHHHS--SC--SSCSCHHHHHHHHHHHHTTT-CCCCCCC--CCCS--SCCC------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--cc--CcCcCHHHHHHHHHHHHHHH-Hhhcccc--cCcc--cCCc------
Confidence 9999999999999887743222222222 11 23578999999999999876 6666664 2211 1221
Q ss_pred cCcccCchhhHHHHHHHHHHHHHHHHH
Q 001304 882 AGRLLNPSTFAGWFGRSLFHAIVAFVI 908 (1104)
Q Consensus 882 ~~~~~~~~~~~~~~~~~~~~~~v~~~~ 908 (1104)
+......++..+..+++.+++.+++
T Consensus 703 --~~~~~~~~~~~~~~g~~~~~~~~~~ 727 (885)
T 3b8c_A 703 --SWKLKEIFATGVVLGGYQAIMTVIF 727 (885)
T ss_dssp --STTTTTTTTTHHHHHSSTHHHHTTS
T ss_pred --chhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1112334555556677776665543
|
| >3rfu_A Copper efflux ATPase; alpha helical, CPC, CXXC, ATP-binding, hydrolase, ION transp magnesium, Cu+, membrane, metal-binding; 3.20A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-68 Score=653.97 Aligned_cols=493 Identities=18% Similarity=0.211 Sum_probs=392.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh------HhhcceEEEEEE-CCeEEEEeccCCccceEEEEecCCcccceEEEEeccC
Q 001304 72 PLIFIFAVSATKEAWDDYNRYLSD------KKANEKEVWVVK-QGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSD 144 (1104)
Q Consensus 72 ~l~~i~~i~~~~~~~~d~~~~~~~------~~~n~~~~~V~r-~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~ 144 (1104)
...+++++..+..++|++.++|+. .++.+++++|+| ||++++|++++|+|||+|+|++||+|||||+|+
T Consensus 190 ~a~~ii~~~llg~~le~~a~~~~~~ai~~L~~l~p~~a~vv~~dg~~~~v~~~~l~~GDiv~v~~Ge~IPaDg~vl---- 265 (736)
T 3rfu_A 190 AAAVITTLVLLGQVLELKAREQTGSAIRALLKLVPESAHRIKEDGSEEEVSLDNVAVGDLLRVRPGEKIPVDGEVQ---- 265 (736)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCSSHHHHHTCCCCCEEEEEETTEEEEEEETTTCCTTCEECCCSSEECCSCEEEC----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCEEEEEEHhhCCCCCEEEECCCCcccccEEEE----
Confidence 344555666677788888876643 344678999998 999999999999999999999999999999999
Q ss_pred CCccEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeee
Q 001304 145 PQGVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQ 224 (1104)
Q Consensus 145 ~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~ 224 (1104)
+|.++||||+|||||.|+.|. .++.+++
T Consensus 266 -~G~~~VDES~LTGES~Pv~K~---------------------------------------------------~gd~v~~ 293 (736)
T 3rfu_A 266 -EGRSFVDESMVTGEPIPVAKE---------------------------------------------------ASAKVIG 293 (736)
T ss_dssp -SSCEEEECSSSTTCSSCEEEC---------------------------------------------------TTCEECT
T ss_pred -ECceEeeecccCCccccEEec---------------------------------------------------cCCcCCC
Confidence 778999999999999999993 3567999
Q ss_pred cceeccCceEEEEEEEecCccccccccC---CCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceee
Q 001304 225 SCYLRNTEWACGVAVYTGNETKLGMTRG---IPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYV 301 (1104)
Q Consensus 225 Gt~l~~~~~~~gvVv~tG~~T~~~~~~~---~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 301 (1104)
||.+.+| ++++.|++||.+|.++++.+ .++.+++++++.+++++.++++++++++++++++++++..
T Consensus 294 Gt~~~~G-~~~~~v~~~G~~T~l~~I~~lv~~a~~~k~~~q~~~d~~a~~~v~~vl~ia~~~~~~w~~~~~--------- 363 (736)
T 3rfu_A 294 ATINQTG-SFVMKALHVGSDTMLARIVQMVSDAQRSRAPIQRLADTVSGWFVPAVILVAVLSFIVWALLGP--------- 363 (736)
T ss_dssp TCEEESC-CCCEEECCCSTTSHHHHHHHHHHHHHSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---------
T ss_pred ceEeccc-eEEEEEEEechhhHHHHHHHHHHHhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------
Confidence 9999988 79999999999999988754 4566789999999999999988888888777665433211
Q ss_pred ccCCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEec
Q 001304 302 LYPQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTD 381 (1104)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~D 381 (1104)
...+...+..+ +.+++.++|++|++++.++...... ++.+ .++++|+++.+|+||++|+||||
T Consensus 364 ----~~~~~~~l~~a---i~vlviacPcaL~la~p~a~~~~~~------~~a~----~gilvk~~~alE~l~~v~~i~fD 426 (736)
T 3rfu_A 364 ----QPALSYGLIAA---VSVLIIACPCALGLATPMSIMVGVG------KGAQ----SGVLIKNAEALERMEKVNTLVVD 426 (736)
T ss_dssp ----SSSTTHHHHHH---HHHHHHHCCSTHHHHHHHHHHHHHH------HHHH----TTEEESCHHHHHHHTSCCEEEEC
T ss_pred ----CchHHHHHHHH---HHhHHHhhhhHHHHHHHHHHHHHHH------HHhh----cceeechHHHHHHhcCCCEEEEe
Confidence 11233334333 3467788999998777777666654 3332 35999999999999999999999
Q ss_pred CCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHH
Q 001304 382 KTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEA 461 (1104)
Q Consensus 382 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~A 461 (1104)
||||||+|+|+|.+++.++. . ..+++...+.+ . +.++||.+.|
T Consensus 427 KTGTLT~g~~~v~~i~~~~~----------~--------------~~~~l~~aa~l---e----------~~s~hPla~A 469 (736)
T 3rfu_A 427 KTGTLTEGHPKLTRIVTDDF----------V--------------EDNALALAAAL---E----------HQSEHPLANA 469 (736)
T ss_dssp CBTTTBCSSCEEEEEEESSS----------C--------------HHHHHHHHHHH---H----------HSSCCHHHHH
T ss_pred CCCCCcCCceEEEEEEecCC----------C--------------HHHHHHHHHHH---h----------hcCCChHHHH
Confidence 99999999999999873221 0 01122211111 1 2367999999
Q ss_pred HHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchh
Q 001304 462 LVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTR 541 (1104)
Q Consensus 462 l~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~ 541 (1104)
+++++++.|+.+. ...+|++.+++... ... +|+. +.+|+++.+.+... ...
T Consensus 470 iv~~a~~~~~~~~---------------------~~~~f~~~~g~gv~-~~~--~g~~--~~~G~~~~~~~~~~---~~~ 520 (736)
T 3rfu_A 470 IVHAAKEKGLSLG---------------------SVEAFEAPTGKGVV-GQV--DGHH--VAIGNARLMQEHGG---DNA 520 (736)
T ss_dssp HHHHHHTTCCCCC---------------------CCSCCCCCTTTEEE-ECS--SSSC--EEEESHHHHHHHCC---CCH
T ss_pred HHHHHHhcCCCcc---------------------CcccccccCCceEE-EEE--CCEE--EEEcCHHHHHHcCC---Chh
Confidence 9999998775431 23467776665432 221 3332 45699987765432 235
Q ss_pred HHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHH
Q 001304 542 TFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPET 621 (1104)
Q Consensus 542 ~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~ 621 (1104)
.+.+..++++.+|+|++++| .|.+++|+++++|++|++++++
T Consensus 521 ~~~~~~~~~~~~G~~vl~va--------------------------------------~d~~~~G~i~i~D~i~~~~~~a 562 (736)
T 3rfu_A 521 PLFEKADELRGKGASVMFMA--------------------------------------VDGKTVALLVVEDPIKSSTPET 562 (736)
T ss_dssp HHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEECCBCSSHHHH
T ss_pred HHHHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEeeccchhhHHHH
Confidence 67788999999999999999 4678999999999999999999
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchh
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 701 (1104)
|++|+++|++++|+|||+..+|..+|+++|+
T Consensus 563 I~~L~~~Gi~v~mlTGd~~~~a~~ia~~lgi------------------------------------------------- 593 (736)
T 3rfu_A 563 ILELQQSGIEIVMLTGDSKRTAEAVAGTLGI------------------------------------------------- 593 (736)
T ss_dssp HHHHHHHTCEEEEECSSCHHHHHHHHHHHTC-------------------------------------------------
T ss_pred HHHHHHCCCeEEEECCCCHHHHHHHHHHcCC-------------------------------------------------
Confidence 9999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhc
Q 001304 702 LEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAA 781 (1104)
Q Consensus 702 l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~A 781 (1104)
..++++++|++|.++|+.+++.|+.|+|+|||.||+|||++||||||| |+..+.++++|
T Consensus 594 --------------------~~v~a~~~P~~K~~~v~~l~~~g~~V~~vGDG~ND~paL~~AdvGIAm-g~g~d~a~~~A 652 (736)
T 3rfu_A 594 --------------------KKVVAEIMPEDKSRIVSELKDKGLIVAMAGDGVNDAPALAKADIGIAM-GTGTDVAIESA 652 (736)
T ss_dssp --------------------CCEECSCCHHHHHHHHHHHHHHSCCEEEEECSSTTHHHHHHSSEEEEE-SSSCSHHHHHC
T ss_pred --------------------CEEEEecCHHHHHHHHHHHHhcCCEEEEEECChHhHHHHHhCCEEEEe-CCccHHHHHhC
Confidence 247789999999999999999999999999999999999999999999 77666677799
Q ss_pred ceecccchhhHHH-HHhhhhhhhhhhhHHHHhHhhhhHHHH
Q 001304 782 DYSIGKFRFLKRL-ILVHGRYSYNRTAFLSQYSFYKSLLIC 821 (1104)
Q Consensus 782 D~vl~~f~~l~~l-ll~~GR~~~~~i~~~i~~~~~k~~~~~ 821 (1104)
|+++.+.++-... .+.+||.+++|+++.+.|.+.+|++..
T Consensus 653 D~vl~~~~~~~i~~ai~~sr~t~~~i~qnl~~a~~yN~~~i 693 (736)
T 3rfu_A 653 GVTLLHGDLRGIAKARRLSESTMSNIRQNLFFAFIYNVLGV 693 (736)
T ss_dssp SEEECSCCSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999865553333 368999999999999999999998643
|
| >3j08_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.6e-66 Score=636.43 Aligned_cols=485 Identities=17% Similarity=0.214 Sum_probs=385.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCC
Q 001304 73 LIFIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~ 146 (1104)
.++++++..+.+++|++.++|+ ..++.+++++|+|||++++|+++||+|||+|+|++||+|||||+|+ +
T Consensus 99 ~~~i~~~~~ig~~le~~~~~~~~~~l~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~ 173 (645)
T 3j08_A 99 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----E 173 (645)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----E
Confidence 3444445566778888887664 3456788999999999999999999999999999999999999999 5
Q ss_pred ccEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecc
Q 001304 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (1104)
Q Consensus 147 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt 226 (1104)
|.++||||+|||||.|+.| ..++.+++||
T Consensus 174 G~~~VdeS~LTGES~Pv~K---------------------------------------------------~~g~~v~~Gt 202 (645)
T 3j08_A 174 GESYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGAT 202 (645)
T ss_dssp CCEEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTTC
T ss_pred CcEEEEcccccCCCCceec---------------------------------------------------CCCCEeeccE
Confidence 7799999999999999999 3457899999
Q ss_pred eeccCceEEEEEEEecCcccccccc---CCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeecc
Q 001304 227 YLRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY 303 (1104)
Q Consensus 227 ~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (1104)
.+.+| +++++|++||.+|.++++. ...+.+++++++.+++++.++++++++++++.++.++++.
T Consensus 203 ~~~~g-~~~~~v~~~G~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~------------ 269 (645)
T 3j08_A 203 INNTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA------------ 269 (645)
T ss_dssp EECSS-CEEEEEEECGGGSHHHHHHHHHSCCCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCC------------
T ss_pred EEecC-cEEEEEEEcCCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 99988 7999999999999888764 4667788999999999999988888877777766543321
Q ss_pred CCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCC
Q 001304 304 PQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT 383 (1104)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKT 383 (1104)
..++...+..++ .+++.++|++|++++.++...+.. ++.+ .++++|+++.+|+||++++||||||
T Consensus 270 --~~~~~~~~~~~i---~vlvia~P~aL~la~p~a~~~~~~------~~a~----~gilvk~~~~lE~lg~v~~i~fDKT 334 (645)
T 3j08_A 270 --HAPLLFAFTTLI---AVLVVACPCAFGLATPTALTVGMG------KGAE----LGILIKNADALEVAEKVTAVIFDKT 334 (645)
T ss_dssp --SCSCCCTTTTTH---HHHHHHSCTTHHHHHHHHHHHHHH------HHHT----TCCCCSSTTHHHHGGGCCEEEEEGG
T ss_pred --CCcHHHHHHHHH---HHHHHHhhhHHHHHHHHHHHHHHH------HHHH----CCeEecCchHHHHhhCCCEEEEcCc
Confidence 112333333333 367788999998887777766654 3332 3589999999999999999999999
Q ss_pred CCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHH
Q 001304 384 GTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (1104)
Q Consensus 384 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~ 463 (1104)
||||+|+|+|.+++..+. +..+++...+.|+ ..++||++.|++
T Consensus 335 GTLT~~~~~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hPla~Aiv 377 (645)
T 3j08_A 335 GTLTKGKPEVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIV 377 (645)
T ss_dssp GTSSSSCCEEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHH
T ss_pred ccccCCCeEEEEEEeCCC------------------------CHHHHHHHHHHHh-------------hcCCChhHHHHH
Confidence 999999999999876431 1123444444443 225799999999
Q ss_pred HHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHH
Q 001304 464 HAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543 (1104)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~ 543 (1104)
+++++.|+......+ ++ ..+ .+.... ..+.+|+++.+.+... ..++.+
T Consensus 378 ~~a~~~g~~~~~~~~-------------~~---~~~----g~g~~~----------~~v~~g~~~~~~~~~~--~~~~~~ 425 (645)
T 3j08_A 378 KKALEHGIELGEPEK-------------VE---VIA----GEGVVA----------DGILVGNKRLMEDFGV--AVSNEV 425 (645)
T ss_dssp HHHHHTTCCCCSCCC-------------CE---EET----TTEEEE----------TTEEEECHHHHHHTTC--CCCHHH
T ss_pred HHHHhcCCCcCCccc-------------eE---Eec----CCceEE----------EEEEECCHHHHHhcCC--CccHHH
Confidence 999988865321111 00 000 000000 1155688776654322 224668
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHH
Q 001304 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (1104)
Q Consensus 544 ~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~ 623 (1104)
.+.+++++.+|+|++++| .|++++|+++++|++|++++++|+
T Consensus 426 ~~~~~~~~~~g~~~l~va--------------------------------------~~~~~~G~i~~~D~l~~~~~~~i~ 467 (645)
T 3j08_A 426 ELALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQ 467 (645)
T ss_dssp HHHHHHHHTTTCCCEEEE--------------------------------------ETTEEEEEEEEECCCTTTHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEEecCCchhHHHHHHH
Confidence 888999999999999999 478999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHH
Q 001304 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (1104)
Q Consensus 624 ~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 703 (1104)
.|+++|++++|+|||+..+|..+|+++|+
T Consensus 468 ~L~~~Gi~v~~~TGd~~~~a~~ia~~lgi--------------------------------------------------- 496 (645)
T 3j08_A 468 ELKRMGIKVGMITGDNWRSAEAISRELNL--------------------------------------------------- 496 (645)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHHHTC---------------------------------------------------
T ss_pred HHHHCCCEEEEEeCCCHHHHHHHHHHcCC---------------------------------------------------
Confidence 99999999999999999999999999998
Q ss_pred HHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcce
Q 001304 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (1104)
Q Consensus 704 ~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~ 783 (1104)
..++++++|++|.++|+.+++. +.|+|+|||.||+||++.||+||+| |+..+.++++||+
T Consensus 497 ------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~ 556 (645)
T 3j08_A 497 ------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDI 556 (645)
T ss_dssp ------------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSSCHHHHHHSSEEEEE-CCCSCCSSCCSSS
T ss_pred ------------------CEEEEeCCHHhHHHHHHHHhhC-CeEEEEeCCHhHHHHHHhCCEEEEe-CCCcHHHHHhCCE
Confidence 3578899999999999999988 8999999999999999999999999 6666667779999
Q ss_pred ecccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHH
Q 001304 784 SIGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLI 820 (1104)
Q Consensus 784 vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~ 820 (1104)
++.++++ +..+ +.+||++++|+++.+.|.+.+|++.
T Consensus 557 vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~N~~~ 594 (645)
T 3j08_A 557 VLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVIL 594 (645)
T ss_dssp EESSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9976554 4443 5889999999999999999999874
|
| >3j09_A COPA, copper-exporting P-type ATPase A; copper transporter, adenosine triphosph archaeal proteins, cation transport proteins; 10.00A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=100.00 E-value=3.8e-66 Score=641.79 Aligned_cols=485 Identities=17% Similarity=0.210 Sum_probs=386.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhh------hHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCC
Q 001304 73 LIFIFAVSATKEAWDDYNRYLS------DKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQ 146 (1104)
Q Consensus 73 l~~i~~i~~~~~~~~d~~~~~~------~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~ 146 (1104)
.++++++..+.+++|++.++|+ ..++.+++++|+|||++++|++++|+|||+|+|++||+|||||+|+ +
T Consensus 177 ~~~i~~~~~ig~~le~~~~~~~~~~i~~l~~l~~~~a~v~r~g~~~~i~~~~l~~GDiv~v~~Ge~IPaDg~vl-----~ 251 (723)
T 3j09_A 177 SVLLLAFLLLGRTLEARAKSRTGEAIKKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----E 251 (723)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCTTHHHHHTSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeeEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeEEEEE-----E
Confidence 3444555667778888887664 3455788999999999999999999999999999999999999999 5
Q ss_pred ccEEEEeccCCCCCCceEeeccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecc
Q 001304 147 GVCYVETAALDGETDLKTRLIPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSC 226 (1104)
Q Consensus 147 G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt 226 (1104)
|.++||||+|||||.|+.| ..++.+++||
T Consensus 252 G~~~VdeS~LTGES~pv~K---------------------------------------------------~~g~~v~~Gt 280 (723)
T 3j09_A 252 GESYVDESMISGEPVPVLK---------------------------------------------------SKGDEVFGAT 280 (723)
T ss_dssp CCEEEECHHHHCCSSCEEE---------------------------------------------------CTTCEECTTC
T ss_pred CCeEEecccccCCCcceee---------------------------------------------------cCCCeeccce
Confidence 7799999999999999999 3457899999
Q ss_pred eeccCceEEEEEEEecCcccccccc---CCCCCCcChHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccceeecc
Q 001304 227 YLRNTEWACGVAVYTGNETKLGMTR---GIPEPKLTAVDAMIDKLTGAIFVFQIVVVIVLGTAGNVWKDTEARKQWYVLY 303 (1104)
Q Consensus 227 ~l~~~~~~~gvVv~tG~~T~~~~~~---~~~~~k~s~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 303 (1104)
.+.+| ++.++|++||.+|.++++. ...+.+++++++.+++++.++++++++++++.++.++++.
T Consensus 281 ~~~~g-~~~~~v~~~g~~T~l~~i~~lv~~a~~~k~~~~~~~d~~~~~~~~~vl~~a~~~~~~~~~~~------------ 347 (723)
T 3j09_A 281 INNTG-VLKIRATRVGGETLLAQIVKLVEDAMGSKPPIQRLADKVVAYFIPTVLLVAISAFIYWYFIA------------ 347 (723)
T ss_dssp EECSS-CEEEEEEECGGGSHHHHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHTTSCSST------------
T ss_pred EEecC-cEEEEEEEecCccHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------------
Confidence 99987 7999999999999888764 4667788999999999999988888877777766543221
Q ss_pred CCCcchhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCC
Q 001304 304 PQEFPWYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT 383 (1104)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKT 383 (1104)
..++...+..+ +.+++.++|++|++++.++...+.. ++.+ .++++|+++.+|+||++++||||||
T Consensus 348 --~~~~~~~~~~~---i~vlvia~P~aL~la~p~a~~~~~~------~~a~----~gilvk~~~~lE~lg~v~~i~fDKT 412 (723)
T 3j09_A 348 --HAPLLFAFTTL---IAVLVVACPCAFGLATPTALTVGMG------KGAE----LGILIKNADALEVAEKVTAVIFDKT 412 (723)
T ss_dssp --TCTTCCSHHHH---HHHHHHHSCTTHHHHHHHHHHHHHH------HHHT----TTCEESSTTHHHHGGGCCEEEEEHH
T ss_pred --CCcHHHHHHHH---HHHHHhhhhHHHHHHHHHHHHHHHH------HHHH----CCeEEeChHHHHHhhcCCEEEEcCC
Confidence 11233333333 3467788999998887777766654 3332 3589999999999999999999999
Q ss_pred CCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHH
Q 001304 384 GTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALV 463 (1104)
Q Consensus 384 GTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~ 463 (1104)
||||+|+|+|.+++..+. +..+++...+.|. ..++||++.|++
T Consensus 413 GTLT~g~~~v~~~~~~~~------------------------~~~~~l~~aa~~e-------------~~s~hP~~~Ai~ 455 (723)
T 3j09_A 413 GTLTKGKPEVTDLVPLNG------------------------DERELLRLAAIAE-------------RRSEHPIAEAIV 455 (723)
T ss_dssp HHTSCSCCEEEEEEESSS------------------------CHHHHHHHHHHHH-------------TTCCSHHHHHHH
T ss_pred CccccCceEEEEEEeCCC------------------------CHHHHHHHHHHHh-------------ccCCCchhHHHH
Confidence 999999999999876431 1123334444432 225799999999
Q ss_pred HHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccCCchhHH
Q 001304 464 HAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAGQQTRTF 543 (1104)
Q Consensus 464 ~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~~~~~~~ 543 (1104)
+++++.|+....... ++ ..+ .+.... ..+.+|+++.+.+... ..++.+
T Consensus 456 ~~a~~~~~~~~~~~~-------------~~---~~~----g~g~~~----------~~~~~g~~~~~~~~~~--~~~~~~ 503 (723)
T 3j09_A 456 KKALEHGIELGEPEK-------------VE---VIA----GEGVVA----------DGILVGNKRLMEDFGV--AVSNEV 503 (723)
T ss_dssp HHHHHTTCCCCSCCC-------------CE---EET----TTEEEE----------TTEEEECHHHHHHTTC--CCCHHH
T ss_pred HHHHhcCCCcCCccc-------------eE---Eec----CCceEE----------EEEEECCHHHHHhcCC--CccHHH
Confidence 999988865321111 00 000 000000 1155688776654322 224678
Q ss_pred HHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCCChHHHHH
Q 001304 544 VEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIE 623 (1104)
Q Consensus 544 ~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~~~~~~I~ 623 (1104)
.+.+++++.+|+|++++| .|++++|+++++|++|++++++|+
T Consensus 504 ~~~~~~~~~~g~~~~~va--------------------------------------~~~~~~G~i~i~D~~~~~~~~~i~ 545 (723)
T 3j09_A 504 ELALEKLEREAKTAVIVA--------------------------------------RNGRVEGIIAVSDTLKESAKPAVQ 545 (723)
T ss_dssp HHHHHHHHTTTCEEEEEE--------------------------------------ETTEEEEEEEEECCSCTTHHHHHH
T ss_pred HHHHHHHHhcCCeEEEEE--------------------------------------ECCEEEEEEeecCCcchhHHHHHH
Confidence 888999999999999999 478999999999999999999999
Q ss_pred HHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchhHH
Q 001304 624 TLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALE 703 (1104)
Q Consensus 624 ~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~l~ 703 (1104)
.|+++||+++|+|||+..+|..+|+++|+
T Consensus 546 ~l~~~Gi~v~~~TGd~~~~a~~ia~~lgi--------------------------------------------------- 574 (723)
T 3j09_A 546 ELKRMGIKVGMITGDNWRSAEAISRELNL--------------------------------------------------- 574 (723)
T ss_dssp HHHHTTCEEEEECSSCHHHHHHHHHHHTC---------------------------------------------------
T ss_pred HHHHCCCEEEEECCCCHHHHHHHHHHcCC---------------------------------------------------
Confidence 99999999999999999999999999998
Q ss_pred HHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcce
Q 001304 704 IALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (1104)
Q Consensus 704 ~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~ 783 (1104)
..++++++|++|..+|+.+++. +.|+|+|||.||+|||+.||+|||| |+..+.++++||+
T Consensus 575 ------------------~~~~~~~~P~~K~~~v~~l~~~-~~v~~vGDg~ND~~al~~A~vgiam-g~g~~~a~~~AD~ 634 (723)
T 3j09_A 575 ------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALAQADLGIAV-GSGSDVAVESGDI 634 (723)
T ss_dssp ------------------SEEECSCCTTCHHHHHHHHTTT-CCEEEEECSSTTHHHHHHSSEEEEC-CCCSCCSSCCSSE
T ss_pred ------------------cEEEccCCHHHHHHHHHHHhcC-CeEEEEECChhhHHHHhhCCEEEEe-CCCcHHHHHhCCE
Confidence 3578899999999999999988 8999999999999999999999999 6665566779999
Q ss_pred ecccchh--hHHHHHhhhhhhhhhhhHHHHhHhhhhHHH
Q 001304 784 SIGKFRF--LKRLILVHGRYSYNRTAFLSQYSFYKSLLI 820 (1104)
Q Consensus 784 vl~~f~~--l~~lll~~GR~~~~~i~~~i~~~~~k~~~~ 820 (1104)
++.++++ +..+ +.+||++|+|+++.+.|.+++|++.
T Consensus 635 vl~~~~~~~i~~~-i~~~r~~~~~i~~nl~~a~~~n~~~ 672 (723)
T 3j09_A 635 VLIRDDLRDVVAA-IQLSRKTMSKIKQNIFWALIYNVIL 672 (723)
T ss_dssp ECSSCCTTHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeCCCHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9976555 4443 5899999999999999999999874
|
| >2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=4.2e-25 Score=241.99 Aligned_cols=137 Identities=23% Similarity=0.349 Sum_probs=115.4
Q ss_pred cCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHH
Q 001304 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERV 679 (1104)
Q Consensus 600 ~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~ 679 (1104)
.+-.+.|.+.+.|+++|+++++|+.|+++|++++|+|||+..++..+++++|+.
T Consensus 123 ~~~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~~gl~-------------------------- 176 (263)
T 2yj3_A 123 INGEPIASFNISDVPRPNLKDYLEKLKNEGLKIIILSGDKEDKVKELSKELNIQ-------------------------- 176 (263)
Confidence 345688999999999999999999999999999999999999999999998872
Q ss_pred HHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhh
Q 001304 680 LLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRM 759 (1104)
Q Consensus 680 ~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~m 759 (1104)
.+|..+.|+.|..+++.++..++.|+|||||.||++|
T Consensus 177 -------------------------------------------~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~a 213 (263)
T 2yj3_A 177 -------------------------------------------EYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAA 213 (263)
Confidence 1233445999999999999888899999999999999
Q ss_pred hhhcCceEEecCCchHHHhhhcceec--ccchhhHHHHHhhhhhhhhhhh
Q 001304 760 IQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTA 807 (1104)
Q Consensus 760 l~~AdvGIam~g~~~~~a~~~AD~vl--~~f~~l~~lll~~GR~~~~~i~ 807 (1104)
++.||+||++ |+....+...||+++ .++..+..+ +..+|.++++++
T Consensus 214 a~~Agv~va~-g~~~~~~~~~ad~v~~~~~l~~l~~~-l~~~r~~~~~i~ 261 (263)
T 2yj3_A 214 LALADVSVAM-GNGVDISKNVADIILVSNDIGTLLGL-IKNRKRLSNAIP 261 (263)
Confidence 9999999999 655444556899999 555555554 578999888875
|
| >3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I | Back alignment and structure |
|---|
Probab=99.87 E-value=1.5e-21 Score=217.06 Aligned_cols=271 Identities=21% Similarity=0.260 Sum_probs=192.5
Q ss_pred CCCccccccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhh
Q 001304 357 TDTPSHATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAV 436 (1104)
Q Consensus 357 ~~~~~~~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lal 436 (1104)
.+.++++|+++++|+++++++||||||||||.+.+.+..+...+. .+ .+++ .+
T Consensus 14 ~~~gilik~~~~le~l~~i~~viFD~dGTL~ds~~~~~~~~~~~~----------~~--------------~~~l---~~ 66 (287)
T 3a1c_A 14 AELGILIKNADALEVAEKVTAVIFDKTGTLTKGKPEVTDLVPLNG----------DE--------------RELL---RL 66 (287)
T ss_dssp CCCCEEECSTTHHHHHHHCCEEEEECCCCCBCSCCEEEEEEESSS----------CH--------------HHHH---HH
T ss_pred HHCCEEEeCcHHHHHhhcCCEEEEeCCCCCcCCCEEEEEEEeCCC----------CH--------------HHHH---HH
Confidence 345799999999999999999999999999999999988765421 00 1222 22
Q ss_pred hcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCC
Q 001304 437 CNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHS 516 (1104)
Q Consensus 437 c~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~ 516 (1104)
|.++. ..+.+|.+.|+.+++++.|+..... ..+. ...| +.+. .
T Consensus 67 ~~~~e----------~~s~hp~~~a~~~~~~~~g~~~~~~--~~~~-~~~G-----------------~~~~----~--- 109 (287)
T 3a1c_A 67 AAIAE----------RRSEHPIAEAIVKKALEHGIELGEP--EKVE-VIAG-----------------EGVV----A--- 109 (287)
T ss_dssp HHHHT----------TTCCSHHHHHHHHHHHHTTCCCCCC--SCEE-EETT-----------------TEEE----E---
T ss_pred HHHHh----------hcCCCHHHHHHHHHHHhcCCCcccc--ccce-eecC-----------------CCeE----E---
Confidence 33322 1257999999999999988642110 0000 0001 0000 0
Q ss_pred CcEEEEecChHHhhhhhhccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHH
Q 001304 517 GNISLLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ 596 (1104)
Q Consensus 517 ~~~~l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~ 596 (1104)
. .+.+|.++.+..... ..++.+.+..+.+..+|.+++++++
T Consensus 110 ~---~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~i~~~~---------------------------------- 150 (287)
T 3a1c_A 110 D---GILVGNKRLMEDFGV--AVSNEVELALEKLEREAKTAVIVAR---------------------------------- 150 (287)
T ss_dssp T---TEEEECHHHHHHTTC--CCCHHHHHHHHHHHHTTCEEEEEEE----------------------------------
T ss_pred E---EEEECCHHHHHhcCC--CccHHHHHHHHHHHhCCCeEEEEEE----------------------------------
Confidence 0 133465443322111 1113456677888899999999983
Q ss_pred HhccCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHH
Q 001304 597 RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSL 676 (1104)
Q Consensus 597 ~ie~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~ 676 (1104)
|..++|.+..+++++|+++++++.|+++|+++.++||++...+..++..+|+.
T Consensus 151 ----d~~~~~~~~~~~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~----------------------- 203 (287)
T 3a1c_A 151 ----NGRVEGIIAVSDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNLD----------------------- 203 (287)
T ss_dssp ----TTEEEEEEEEECCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------
T ss_pred ----CCEEEEEEEeccccchhHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCc-----------------------
Confidence 56789999999999999999999999999999999999999999999998872
Q ss_pred HHHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccC
Q 001304 677 ERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGND 756 (1104)
Q Consensus 677 ~~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND 756 (1104)
..|..+.|..|...++.++.. +.++||||+.||
T Consensus 204 ----------------------------------------------~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~D 236 (287)
T 3a1c_A 204 ----------------------------------------------LVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGIND 236 (287)
T ss_dssp ----------------------------------------------EEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTC
T ss_pred ----------------------------------------------eeeeecChHHHHHHHHHHhcC-CeEEEEECCHHH
Confidence 234455688999999998877 899999999999
Q ss_pred hhhhhhcCceEEecCCchHHHhhhcceec--ccchhhHHHHHhhhhhhhhhh
Q 001304 757 VRMIQKADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRT 806 (1104)
Q Consensus 757 ~~ml~~AdvGIam~g~~~~~a~~~AD~vl--~~f~~l~~lll~~GR~~~~~i 806 (1104)
++|.+.|++||++ ++.....+..||+++ .++..+..+ +..+|.+++++
T Consensus 237 i~~a~~ag~~v~~-~~~~~~~~~~ad~v~~~~~~~~l~~~-l~~~~~~~~~i 286 (287)
T 3a1c_A 237 APALAQADLGIAV-GSGSDVAVESGDIVLIRDDLRDVVAA-IQLSRKTMSKI 286 (287)
T ss_dssp HHHHHHSSEEEEE-CCCSCCSSCCSSEEESSSCTHHHHHH-HHTTC------
T ss_pred HHHHHHCCeeEEe-CCCCHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHhh
Confidence 9999999999999 554434455799999 566656554 58899888876
|
| >2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F | Back alignment and structure |
|---|
Probab=99.86 E-value=3.1e-22 Score=186.12 Aligned_cols=102 Identities=21% Similarity=0.282 Sum_probs=93.6
Q ss_pred hhhHhhcceEEEEEECCeEEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeecccccc
Q 001304 93 LSDKKANEKEVWVVKQGIKKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACM 172 (1104)
Q Consensus 93 ~~~~~~n~~~~~V~r~g~~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~ 172 (1104)
++..++.+.+++|+|+|++++|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|.
T Consensus 4 ~~L~~l~p~~a~v~r~g~~~~i~~~~l~~GDiv~v~~G~~iPaDg~v~-----~g~~~vdeS~LTGEs~pv~k~------ 72 (113)
T 2hc8_A 4 KKLVGLQAKTAVVIRDGKEIAVPVEEVAVGDIVIVRPGEKIPVDGVVV-----EGESYVDESMISGEPVPVLKS------ 72 (113)
T ss_dssp HHHHHHSCSEEEEEETTEEEEEEGGGCCTTCEEEECTTCBCCSEEEEE-----ECCEEEECHHHHCCSSCEEEC------
T ss_pred HHHhcCCCCEEEEEECCEEEEEEHHHCCCCCEEEECCCCEEeeeEEEE-----EceEEEEccccCCCCccEEEC------
Confidence 456778899999999999999999999999999999999999999999 566999999999999999993
Q ss_pred CCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcccccccc
Q 001304 173 GMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251 (1104)
Q Consensus 173 ~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~ 251 (1104)
.++.+|+||.+.+| .+.++|++||.+|.++++.
T Consensus 73 ---------------------------------------------~g~~v~aGt~~~~G-~~~~~V~~~g~~T~~~~i~ 105 (113)
T 2hc8_A 73 ---------------------------------------------KGDEVFGATINNTG-VLKIRATRVGGETLLAQIV 105 (113)
T ss_dssp ---------------------------------------------TTCEECTTCEECSS-CEEEEEEECGGGSHHHHHH
T ss_pred ---------------------------------------------CCCEEEeCCEEeec-eEEEEEEEecCcCHHHHHH
Confidence 45789999999998 6999999999999998764
|
| >3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A* | Back alignment and structure |
|---|
Probab=99.83 E-value=2.6e-19 Score=197.92 Aligned_cols=271 Identities=25% Similarity=0.291 Sum_probs=185.9
Q ss_pred cccccccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhccccc
Q 001304 363 ATNTAISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIP 442 (1104)
Q Consensus 363 ~~~~~~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~ 442 (1104)
+|++.++|.+++++.|+||||||||.|+|++..+...+. ...+++..++.+..
T Consensus 1 ~k~~~~~e~~~~ik~i~FD~DGTL~d~~~~v~~~~~~~~------------------------~~~~~~~~~~~~~~--- 53 (280)
T 3skx_A 1 MRDRQAFERAKDLQAVIFDKTGTLTEGRFGVTDIVGFNH------------------------SEDELLQIAASLEA--- 53 (280)
T ss_dssp ----CHHHHGGGCCEEEEECCCCCEEEEEEEEEEEESSS------------------------CHHHHHHHHHHHHT---
T ss_pred CCChHHHHHhcCCCEEEEeCCCcCCCCcEEEEEEEecCC------------------------CHHHHHHHHHHhhc---
Confidence 467888999999999999999999999999998864321 11223333332221
Q ss_pred ccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEE
Q 001304 443 AKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLL 522 (1104)
Q Consensus 443 ~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~ 522 (1104)
.+.+|...++.+.++..|..... ... +..++ .+.+...+ ++.. +
T Consensus 54 ----------~s~~~~~~a~~~~~~~~g~~~~~-------------~~~---~~~~~----g~~~~~~~----~~~~--~ 97 (280)
T 3skx_A 54 ----------RSEHPIAAAIVEEAEKRGFGLTE-------------VEE---FRAIP----GKGVEGIV----NGRR--Y 97 (280)
T ss_dssp ----------TCCSHHHHHHHHHHHHTTCCCCC-------------CEE---EEEET----TTEEEEEE----TTEE--E
T ss_pred ----------cCCCHHHHHHHHHHHhcCCCCCC-------------ccc---eeecC----CCEEEEEE----CCEE--E
Confidence 13567888999999888764311 000 11111 11111111 1222 2
Q ss_pred ecChHHhhhhhhccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCc
Q 001304 523 SKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDL 602 (1104)
Q Consensus 523 ~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l 602 (1104)
..|.++.+........ ....++..++.+.+.++ .+.
T Consensus 98 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~--------------------------------------~~~ 133 (280)
T 3skx_A 98 MVVSPGYIRELGIKTD------ESVEKLKQQGKTVVFIL--------------------------------------KNG 133 (280)
T ss_dssp EEECHHHHHHTTCCCC------TTHHHHHTTTCEEEEEE--------------------------------------ETT
T ss_pred EEecHHHHHHcCCCch------HHHHHHHhCCCeEEEEE--------------------------------------ECC
Confidence 2355555444322111 33556778888888877 466
Q ss_pred EEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHH
Q 001304 603 KVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLT 682 (1104)
Q Consensus 603 ~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1104)
.++|.+.++|+++++++++++.|+++|+++.++||++...+..+++.+|+.
T Consensus 134 ~~~~~~~~~~~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~----------------------------- 184 (280)
T 3skx_A 134 EVSGVIALADRIRPESREAISKLKAIGIKCMMLTGDNRFVAKWVAEELGLD----------------------------- 184 (280)
T ss_dssp EEEEEEEEEEEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCS-----------------------------
T ss_pred EEEEEEEecCCCCHhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCh-----------------------------
Confidence 789999999999999999999999999999999999999999999998872
Q ss_pred ccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhh
Q 001304 683 MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQK 762 (1104)
Q Consensus 683 ~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~ 762 (1104)
..+..+.|.+|...++.+.+.. .++|||||.||++|++.
T Consensus 185 ----------------------------------------~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~ 223 (280)
T 3skx_A 185 ----------------------------------------DYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQ 223 (280)
T ss_dssp ----------------------------------------EEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHH
T ss_pred ----------------------------------------hHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHh
Confidence 2445677889999999888765 67999999999999999
Q ss_pred cCceEEecCCchHHHhhhcceec--ccchhhHHHHHhhhhhhhhhhhHHHHh
Q 001304 763 ADIGVGISGREGLQAARAADYSI--GKFRFLKRLILVHGRYSYNRTAFLSQY 812 (1104)
Q Consensus 763 AdvGIam~g~~~~~a~~~AD~vl--~~f~~l~~lll~~GR~~~~~i~~~i~~ 812 (1104)
|++||+| |+....++..||+++ .+.+.+..+ +..+|.++.+++..+.|
T Consensus 224 Ag~~va~-~~~~~~~~~~a~~~~~~~~~~~l~~~-l~~~~~~~~~~~~n~~~ 273 (280)
T 3skx_A 224 ADVGIAI-GAGTDVAVETADIVLVRNDPRDVAAI-VELSRKTYSKFHGLSAW 273 (280)
T ss_dssp SSEEEEC-SCCSSSCCCSSSEECSSCCTHHHHHH-HHHHHTCCC--------
T ss_pred CCceEEe-cCCcHHHHhhCCEEEeCCCHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 9999999 776666777899998 455555554 47888888877655444
|
| >2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.4e-20 Score=178.39 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=92.0
Q ss_pred hhhHhhcceEEEEEECCe------EEEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEee
Q 001304 93 LSDKKANEKEVWVVKQGI------KKLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRL 166 (1104)
Q Consensus 93 ~~~~~~n~~~~~V~r~g~------~~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~ 166 (1104)
++..++.+.+++|+|+|. ++.|++++|+|||+|.|++||+|||||+|+ +|.+.||||+|||||.|+.|
T Consensus 10 ~~L~~l~p~~a~v~r~g~~~~~~~~~~v~~~~l~~GDiv~v~~G~~iPaDg~vi-----~g~~~vdeS~LTGEs~pv~k- 83 (124)
T 2kij_A 10 AKLISLQATEATIVTLDSDNILLSEEQVDVELVQRGDIIKVVPGGKFPVDGRVI-----EGHSMVDESLITGEAMPVAK- 83 (124)
T ss_dssp HHHHHTCCSEEEEEECSSSTTCCEEEEEETTTCCTTCEEECCTTCBCSSCEEEC-----SCCCEEECTTTTCCSSCEEC-
T ss_pred HHHhccCCCEEEEEECCCCCceeEEEEEeHHHCCCCCEEEECCCCEEEeeEEEE-----EccEEEEeccccCCCccEEe-
Confidence 345677899999999764 688999999999999999999999999999 56679999999999999999
Q ss_pred ccccccCCCHhhhccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCccc
Q 001304 167 IPAACMGMDFELLHKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETK 246 (1104)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~ 246 (1104)
..++.+|+||.+.+| .+.+.|++||.+|.
T Consensus 84 --------------------------------------------------~~g~~v~aGt~~~~G-~~~~~v~~~g~~T~ 112 (124)
T 2kij_A 84 --------------------------------------------------KPGSTVIAGSINQNG-SLLICATHVGADTT 112 (124)
T ss_dssp --------------------------------------------------CTTEEECTTCEEESS-CCEEEECSCTTTCH
T ss_pred --------------------------------------------------CCCCEEEcCCEEeee-EEEEEEEEecccCH
Confidence 345789999999998 69999999999999
Q ss_pred cccccC
Q 001304 247 LGMTRG 252 (1104)
Q Consensus 247 ~~~~~~ 252 (1104)
++++.+
T Consensus 113 ~~~I~~ 118 (124)
T 2kij_A 113 LSQIVK 118 (124)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988654
|
| >3gwi_A Magnesium-transporting ATPase, P-type 1; P-type ATPase, nucleotide binding, ATP binding, MGTA, membra protein, cell inner membrane; 1.60A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.71 E-value=1.6e-18 Score=174.50 Aligned_cols=138 Identities=21% Similarity=0.256 Sum_probs=104.5
Q ss_pred HHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEE
Q 001304 429 RFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMS 508 (1104)
Q Consensus 429 ~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrms 508 (1104)
+.+...++|+.... ..+||+|.|+++++...+. ......|+++..+||||+|||||
T Consensus 17 ~vl~~a~L~s~~~~----------~~~n~~d~Ail~~~~~~~~--------------~~~~~~~~~~~eiPFds~rKrms 72 (170)
T 3gwi_A 17 RVLHSAWLNSHYQT----------GLKNLLDTAVLEGTDEESA--------------RSLASRWQKIDEIPFDFERRRMS 72 (170)
T ss_dssp HHHHHHHHHHHHCC----------SCCCHHHHHHHHTSCHHHH--------------HHHHHHSEEEEEECCCTTTCEEE
T ss_pred HHHHHHHHcCCCCC----------CCCChHHHHHHHHHHhcCh--------------hhhhhcCeEEeeEecCcccCcEE
Confidence 45566667764331 1369999999998754321 01134578899999999999999
Q ss_pred EEEEeCCCCcEEEEecChHHhhhhhhccC-----------CchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHH
Q 001304 509 VVVKDCHSGNISLLSKGADEAILPYAHAG-----------QQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMF 577 (1104)
Q Consensus 509 viv~~~~~~~~~l~~KGa~e~i~~~~~~~-----------~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~ 577 (1104)
++++.+ +|++++++|||||.|+++|+.. ...+.+.+.+++|+.+|+|||++|||.++.++..
T Consensus 73 vv~~~~-~g~~~l~~KGApE~IL~~C~~~~~~g~~~~l~~~~~~~i~~~~~~la~~GlRvLavA~k~~~~~~~~------ 145 (170)
T 3gwi_A 73 VVVAEN-TEHHQLVCKGALQEILNVCSQVRHNGEIVPLDDIMLRKIKRVTDTLNRQGLRVVAVATKYLPAREGD------ 145 (170)
T ss_dssp EEEESS-SSEEEEEEEECHHHHHTTEEEEEETTEEEECCHHHHHHHHHHHHHHHHTTCEEEEEEEEEEECCSSC------
T ss_pred EEEEeC-CCCEEEEEcCCcHHHHHHhHHHhcCCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEEEEECCCCccc------
Confidence 999875 5788999999999999999731 1235788999999999999999999998753200
Q ss_pred HHHhhhhchHHHHHHHHHHHhccCcEEEEEEeeccc
Q 001304 578 KEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDR 613 (1104)
Q Consensus 578 ~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~ 613 (1104)
. ....|+||+|+|++|+-|.
T Consensus 146 ------~----------~~~~E~~L~f~G~~g~~~~ 165 (170)
T 3gwi_A 146 ------Y----------QRADESDLILEGYIAFLDH 165 (170)
T ss_dssp ------C----------CGGGSCSEEEEEEEEEEC-
T ss_pred ------c----------CccccCCcEEEehhccccc
Confidence 0 0245899999999999885
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=99.46 E-value=5.8e-14 Score=156.50 Aligned_cols=141 Identities=16% Similarity=0.150 Sum_probs=104.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
.++++++++++++.|+++|+++.|+|||...++.++|+++|+..++.. +. .+....+ .
T Consensus 139 ~i~l~~g~~e~i~~l~~~gi~v~ivSgg~~~~i~~i~~~~g~~~~~~~--i~-~n~l~~~-------------------~ 196 (297)
T 4fe3_A 139 DVMLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHSNVK--VV-SNFMDFD-------------------E 196 (297)
T ss_dssp CCCBCBTHHHHHHHHHHTTCCEEEEEEEEHHHHHHHHHHTTCCCTTEE--EE-EECEEEC-------------------T
T ss_pred CCCCCCcHHHHHHHHHHcCCeEEEEeCCcHHHHHHHHHHcCCCcccce--EE-eeeEEEc-------------------c
Confidence 479999999999999999999999999999999999999998655321 11 1110000 0
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhh---hcCceE
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQ---KADIGV 767 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~---~AdvGI 767 (1104)
......+.+ .....+++..|.+|...+..+++.++.|+|+|||+||+||++ .||+||
T Consensus 197 ~~~~~~~~~--------------------~~i~~~~k~~~~~k~~~~~~~~~~~~~v~~vGDGiNDa~m~k~l~~advgi 256 (297)
T 4fe3_A 197 NGVLKGFKG--------------------ELIHVFNKHDGALKNTDYFSQLKDNSNIILLGDSQGDLRMADGVANVEHIL 256 (297)
T ss_dssp TSBEEEECS--------------------SCCCTTCHHHHHHTCHHHHHHTTTCCEEEEEESSGGGGGTTTTCSCCSEEE
T ss_pred cceeEeccc--------------------cccchhhcccHHHHHHHHHHhhccCCEEEEEeCcHHHHHHHhCccccCeEE
Confidence 000000101 113456788899999888888888999999999999999955 999999
Q ss_pred EecC------CchHH-HhhhcceecccchhhHHH
Q 001304 768 GISG------REGLQ-AARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 768 am~g------~~~~~-a~~~AD~vl~~f~~l~~l 794 (1104)
+| | .++.+ ++++||+||.++++....
T Consensus 257 ai-Gfl~~~v~~~~d~~~e~~Divl~~d~~~~v~ 289 (297)
T 4fe3_A 257 KI-GYLNDRVDELLEKYMDSYDIVLVKEESLEVV 289 (297)
T ss_dssp EE-EEECSSHHHHHHHHHHHSSEEEETCCBCHHH
T ss_pred EE-EecchhHHHhHHHHHhhCCEEEECCCChHHH
Confidence 99 6 13333 456999999998886544
|
| >4dw8_A Haloacid dehalogenase-like hydrolase; HAD, putative phosphatase, enzyme function initiative, EFI, structural genomics; 1.50A {Bacteroides thetaiotaomicron} PDB: 3niw_A 4dwo_A | Back alignment and structure |
|---|
Probab=99.14 E-value=2.2e-10 Score=126.12 Aligned_cols=188 Identities=19% Similarity=0.206 Sum_probs=112.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC--------------CCeEEEecCCcHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP--------------KGQLLSIDGKTEDEVCRSLER 678 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~--------------~~~~~~~~~~~~~~~~~~~~~ 678 (1104)
.+.+.+.++|++++++|++++++||++...+..+..++|+..... .+..+.....+.+.+.+.++.
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGa~i~~~~~~~~~~~~~l~~~~~~~i~~~ 101 (279)
T 4dw8_A 22 EISSRNRETLIRIQEQGIRLVLASGRPTYGIVPLANELRMNEFGGFILSYNGGEIINWESKEMMYENVLPNEVVPVLYEC 101 (279)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTGGGTTCEEEEGGGTEEEETTTCCEEEECCCCGGGHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHhCCCCCCCEEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHH
Confidence 567889999999999999999999999999999999998731100 111222222222223222222
Q ss_pred HHHH-cc--cc------------------------------------CCCCCceEEEEcchhHHHHHHHHHHHHHh-Hhh
Q 001304 679 VLLT-MR--IT------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTE-LAI 718 (1104)
Q Consensus 679 ~~~~-~~--~~------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~ 718 (1104)
..+. .. .. .....+..+..+...++.+.+.+.+.+.. +..
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~ 181 (279)
T 4dw8_A 102 ARTNHLSILTYDGAEIVTENSLDPYVQKEAFLNKMAIRETNDFLTDITLPVAKCLIVGDAGKLIPVESELCIRLQGKINV 181 (279)
T ss_dssp HHHTTCEEEEEETTEEEESCTTCHHHHHHHHHHTCEEEECSCHHHHSCSCCSCEEEESCHHHHHHHHHHHHHHTTTTCEE
T ss_pred HHHcCCEEEEEECCEEEEeCCCCHHHHHHhhhcCCCcccHHHHHHhhcCCceEEEEeCCHHHHHHHHHHHHHHhcCCEEE
Confidence 1111 00 00 01111222222222334444444444321 222
Q ss_pred hccceeeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchh--
Q 001304 719 LSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF-- 790 (1104)
Q Consensus 719 ~~~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~-- 790 (1104)
......+.++.|. .|+..++.+.+ ..+.|+++||+.||++|++.|++||+| |++..++++.||+++.+.+.
T Consensus 182 ~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~~~e~G 260 (279)
T 4dw8_A 182 FRSEPYFLELVPQGIDKALSLSVLLENIGMTREEVIAIGDGYNDLSMIKFAGMGVAM-GNAQEPVKKAADYITLTNDEDG 260 (279)
T ss_dssp EEEETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCGGGTH
T ss_pred EEcCCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCChhhHHHHHHcCcEEEc-CCCcHHHHHhCCEEcCCCCCcH
Confidence 2233445677777 79988887765 236799999999999999999999999 88888899999999975332
Q ss_pred ----hHHHHHhhhhh
Q 001304 791 ----LKRLILVHGRY 801 (1104)
Q Consensus 791 ----l~~lll~~GR~ 801 (1104)
+..++..+|+.
T Consensus 261 v~~~i~~~~~~~~~~ 275 (279)
T 4dw8_A 261 VAEAIERIFNVEGHH 275 (279)
T ss_dssp HHHHHHHHC------
T ss_pred HHHHHHHHHhccccc
Confidence 34444455654
|
| >3dnp_A Stress response protein YHAX; structural PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, unknown function; HET: MSE; 1.85A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.13 E-value=3e-10 Score=125.84 Aligned_cols=192 Identities=18% Similarity=0.215 Sum_probs=114.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCC--------eEEEecCCcHHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKG--------QLLSIDGKTEDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 682 (1104)
.+.+.+.++|++++++|++++++||+....+..+...+|+..+ ..++ ..+.-.....+.+.+.++.. ..
T Consensus 23 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~~l~~~~~~~i~~~~-~~ 101 (290)
T 3dnp_A 23 KIHQATKDAIEYVKKKGIYVTLVTNRHFRSAQKIAKSLKLDAKLITHSGAYIAEKIDAPFFEKRISDDHTFNIVQVL-ES 101 (290)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHTTCCSCEEEGGGTEEESSTTSCSEECCCCHHHHHHHHHHH-HT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCeEEEcCCeEEEcCCCCEEEecCCCHHHHHHHHHHH-HH
Confidence 5778899999999999999999999999999999999987421 0000 11111112223333322222 21
Q ss_pred cccc------------C-------------------------------------CCCCceEEEEcchhHHHHHHHHHHHH
Q 001304 683 MRIT------------T-------------------------------------SEPKDVAFVVDGWALEIALKHYRKAF 713 (1104)
Q Consensus 683 ~~~~------------~-------------------------------------~~~~~~~lvi~g~~l~~~~~~~~~~f 713 (1104)
.... . ....++.+..+...++.+.+.+.+.+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~ 181 (290)
T 3dnp_A 102 YQCNIRLLHEKYSIGNKKKVNSNLLGKALIHPSDPIFYPVQFVESLSDLLMDEPVSAPVIEVYTEHDIQHDITETITKAF 181 (290)
T ss_dssp SSCEEEEECSSCEEECCCCCCCHHHHHSCCCCCBTTTBCEEECSCHHHHHHHSCCCCSEEEEECCGGGHHHHHHHHHHHC
T ss_pred cCceEEEEECCcEEeeccccchhhhhhhhccccccccccccccCCHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhhC
Confidence 1000 0 00011111122233333333332222
Q ss_pred HhHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 714 TELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 714 ~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
..+........+.++.|. .|+..++.+.+ . .+.|+++||+.||++|++.|++||+| ||+...++..||++..+
T Consensus 182 ~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~s 260 (290)
T 3dnp_A 182 PAVDVIRVNDEKLNIVPKGVSKEAGLALVASELGLSMDDVVAIGHQYDDLPMIELAGLGVAM-GNAVPEIKRKADWVTRS 260 (290)
T ss_dssp TTEEEEEEETTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCC
T ss_pred CcEEEEEeCCCeEEEEECCCCHHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCCEEEe-cCCcHHHHHhcCEECCC
Confidence 223222333445567775 69998887765 2 36799999999999999999999999 88888899999999875
Q ss_pred chh------hHHHHHhhhhhhhhhh
Q 001304 788 FRF------LKRLILVHGRYSYNRT 806 (1104)
Q Consensus 788 f~~------l~~lll~~GR~~~~~i 806 (1104)
.+. +.+++...+++-|.+-
T Consensus 261 ~~edGv~~~i~~~~~~~~~~~~~~~ 285 (290)
T 3dnp_A 261 NDEQGVAYMMKEYFRMQQRKGFLDK 285 (290)
T ss_dssp TTTTHHHHHHHHHHHHHHHC-----
T ss_pred CCccHHHHHHHHHHHhcCcccHHhH
Confidence 332 4444445566655543
|
| >3mpo_A Predicted hydrolase of the HAD superfamily; SGX, PSI, structural genomics, protein structure initiative; 2.90A {Lactobacillus brevis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=99.10 E-value=3.5e-10 Score=124.54 Aligned_cols=173 Identities=17% Similarity=0.203 Sum_probs=103.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC-------------CCeEEEecCCcHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP-------------KGQLLSIDGKTEDEVCRSLERV 679 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 679 (1104)
.+.+.+.++|++++++|++++++||+....+..+...+|+..+.. .+..+.......+.+.+.++..
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~i~~nGai~~~~~~~~~~~~~~~~~~~~~i~~~~ 101 (279)
T 3mpo_A 22 ELAQATIDAVQAAKAQGIKVVLCTGRPLTGVQPYLDAMDIDGDDQYAITFNGSVAQTISGKVLTNHSLTYEDYIDLEAWA 101 (279)
T ss_dssp --CHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCCSSSCEEEEGGGTEEEETTSCEEEECCCCHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCCCEEEEcCcEEEECCCCCEEEecCCCHHHHHHHHHHH
Confidence 567889999999999999999999999999999999998753211 0112222222333333333222
Q ss_pred HHHcccc-----------------------------------------CCCCCceEEEEcchhHHHHHHHHHHHHHh-Hh
Q 001304 680 LLTMRIT-----------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTE-LA 717 (1104)
Q Consensus 680 ~~~~~~~-----------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~ 717 (1104)
.+ .... .....+..+..+...++...+.+.+.+.. +.
T Consensus 102 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 180 (279)
T 3mpo_A 102 RK-VRAHFQIETPDYIYTANKDISAYTIAESYLVRMLIQYREVSETPRDLTISKAMFVDYPQVIEQVKANMPQDFKDRFS 180 (279)
T ss_dssp HH-TTCCEEEECSSCEEECCSBCCHHHHHHHHHHTCCEEECCGGGSCTTCCCCEEEEECCHHHHHHHHHHCCHHHHHHEE
T ss_pred HH-cCCeEEEEECCEEEEcCCcchHHHHHHhhccCCcceecCHHHhhccCCcEEEEEcCCHHHHHHHHHHHHHHhCCCEE
Confidence 11 1000 01111122222223333333333333322 22
Q ss_pred hhccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 718 ILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 718 ~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.......+.++.|. +|+..++.+.+ . .+.++++||+.||++|++.|++||+| ||+..+++..||++..+
T Consensus 181 ~~~s~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~~~ 255 (279)
T 3mpo_A 181 VVQSAPYFIEVMNRRASKGGTLSELVDQLGLTADDVMTLGDQGNDLTMIKYAGLGVAM-GNAIDEVKEAAQAVTLT 255 (279)
T ss_dssp EECCSSSEEEEEESSCCHHHHHHHHHHHTTCCGGGEEEC--CCTTHHHHHHSTEECBC----CCHHHHHCSCBC--
T ss_pred EEEecCceEEEecCCCChHHHHHHHHHHcCCCHHHEEEECCchhhHHHHHhcCceeec-cCCCHHHHHhcceeccC
Confidence 23334456677775 59998887765 2 36799999999999999999999999 88888899999999865
|
| >3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A | Back alignment and structure |
|---|
Probab=99.08 E-value=2.8e-10 Score=117.50 Aligned_cols=135 Identities=13% Similarity=0.089 Sum_probs=101.0
Q ss_pred cEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHH
Q 001304 602 LKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 602 l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1104)
...++...++|.+ +|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 41 ~~~~~~~~~~~~~------~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgl~~--------------------------- 87 (189)
T 3mn1_A 41 GSEIKTFNTLDGQ------GIKMLIASGVTTAIISGRKTAIVERRAKSLGIEH--------------------------- 87 (189)
T ss_dssp SCEEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCSE---------------------------
T ss_pred CcEeeeeccccHH------HHHHHHHCCCEEEEEECcChHHHHHHHHHcCCHH---------------------------
Confidence 3455556665554 9999999999999999999999999999999821
Q ss_pred HccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccCh
Q 001304 682 TMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDV 757 (1104)
Q Consensus 682 ~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~ 757 (1104)
++... ..|...++.+.+ ..+.++++||+.||+
T Consensus 88 ------------------------------------------~f~~~--~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi 123 (189)
T 3mn1_A 88 ------------------------------------------LFQGR--EDKLVVLDKLLAELQLGYEQVAYLGDDLPDL 123 (189)
T ss_dssp ------------------------------------------EECSC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGH
T ss_pred ------------------------------------------HhcCc--CChHHHHHHHHHHcCCChhHEEEECCCHHHH
Confidence 11111 556666665554 247899999999999
Q ss_pred hhhhhcCceEEecCCchHHHhhhcceecccc------hhhHHHHHhhhhhhhhhhhHHHHhHhh
Q 001304 758 RMIQKADIGVGISGREGLQAARAADYSIGKF------RFLKRLILVHGRYSYNRTAFLSQYSFY 815 (1104)
Q Consensus 758 ~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f------~~l~~lll~~GR~~~~~i~~~i~~~~~ 815 (1104)
+|++.|++|+++ ++....++..||+++.+. +.+... +...|..+.++.+.+.|.+.
T Consensus 124 ~~~~~ag~~~~~-~~~~~~~~~~ad~v~~~~~~~G~~~~l~~~-l~~~~~~~~~~~~~~~~~~~ 185 (189)
T 3mn1_A 124 PVIRRVGLGMAV-ANAASFVREHAHGITRAQGGEGAAREFCEL-ILSAQGNLEAAHSVYLEGHH 185 (189)
T ss_dssp HHHHHSSEEEEC-TTSCHHHHHTSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHHHHTTSTTC-
T ss_pred HHHHHCCCeEEe-CCccHHHHHhCCEEecCCCCCcHHHHHHHH-HHHccCcHHHHHHHHhcccc
Confidence 999999999999 666667778999999863 334443 45677888888776665543
|
| >3dao_A Putative phosphatse; structural genomics, joint center for S genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE 1PE CIT; 1.80A {Eubacterium rectale} | Back alignment and structure |
|---|
Probab=99.07 E-value=4.3e-10 Score=124.18 Aligned_cols=176 Identities=14% Similarity=0.112 Sum_probs=112.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC----CC-----CCeEEEecCCcHHHHHHHHHHHHHH-
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EP-----KGQLLSIDGKTEDEVCRSLERVLLT- 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~- 682 (1104)
.+.+.+.++|++++++|++++++||+....+..+...+++..+ +. .+..+.-...+.+.+.+.++...+.
T Consensus 39 ~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 118 (283)
T 3dao_A 39 LIDPEYMSVIDRLIDKGIIFVVCSGRQFSSEFKLFAPIKHKLLYITDGGTVVRTPKEILKTYPMDEDIWKGMCRMVRDEL 118 (283)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHTGGGGGGCEEEETTTTEEECSSCEEEECCCCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCcEEEECCCcEEEECCEEEEEecCCHHHHHHHHHHHHHhc
Confidence 5778899999999999999999999999999998888765211 10 0112222222333333333222211
Q ss_pred -------------------------ccc--------------cC-CCCCceEEEEcchhHHHHHHHHHHHHHh-Hhhhcc
Q 001304 683 -------------------------MRI--------------TT-SEPKDVAFVVDGWALEIALKHYRKAFTE-LAILSR 721 (1104)
Q Consensus 683 -------------------------~~~--------------~~-~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~~ 721 (1104)
+.. .. ....++.+..+.+..+...+.+.+.|.. +.....
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s 198 (283)
T 3dao_A 119 PACDYFAATPDFCFAEDGGSPIFHLLRDSYGFEMREVDDITRLDRNDIIKFTVFHPDKCEELCTPVFIPAWNKKAHLAAA 198 (283)
T ss_dssp TTCEEEEECSSCEEESCTTSHHHHHHHHTSCCCEEECSCGGGCCCSCCCEEEEECSSCHHHHHTTTHHHHHTTTEEEEEE
T ss_pred CCceEEEEeCCeEEEeCCCHHHHHHHHHhhcCCceEcCCHHHcCccCceEEEEEcChHHHHHHHHHHHHHhcCCEEEEEe
Confidence 000 00 1112222222344444444444455432 222233
Q ss_pred ceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 722 TAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 722 ~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
...+.+++|. +|+..++.+.+ . .+.|+++||+.||++|++.|++|||| ||+...+++.||++..+.+
T Consensus 199 ~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~e~ia~GD~~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~s~~ 271 (283)
T 3dao_A 199 GKEWVDCNAKGVSKWTALSYLIDRFDLLPDEVCCFGDNLNDIEMLQNAGISYAV-SNARQEVIAAAKHTCAPYW 271 (283)
T ss_dssp TTTEEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEE-TTSCHHHHHHSSEEECCGG
T ss_pred cCceEEEeeCCCcHHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHhCCCEEEc-CCCCHHHHHhcCeECCCCC
Confidence 3445677776 59998888775 2 36799999999999999999999999 8888889999999987533
|
| >3pgv_A Haloacid dehalogenase-like hydrolase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: EPE; 2.39A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=99.04 E-value=5.9e-10 Score=123.16 Aligned_cols=171 Identities=21% Similarity=0.187 Sum_probs=107.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC----C------CCCeEEEecCCcHHHHHHHHHHHHH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----E------PKGQLLSIDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1104)
..+.+.+.++|++++++|++++++||+....+..+...+|+..+ + ..+..+.-...+.+.+...++....
T Consensus 37 ~~i~~~~~~al~~l~~~G~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~nGa~i~~~~~~~l~~~~l~~~~~~~i~~~~~~ 116 (285)
T 3pgv_A 37 HFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYMITSNGARVHDSDGQQIFAHNLDRDIAADLFEIVRN 116 (285)
T ss_dssp SCCCHHHHHHHHHHHTTTCEEEEECSSCGGGGHHHHHHHCSCCEEEEGGGTEEECTTSCEEEECCCCHHHHHHHTTTTTT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCCCccEEEcCCeEEECCCCCEEEecCCCHHHHHHHHHHHhh
Confidence 35778899999999999999999999999999999999987421 0 0111222222233333322221110
Q ss_pred Hc--cc----------cC---------------------C--CCCc--eEEEE--cchhHHHHHHHHHHHHHh-Hhhhcc
Q 001304 682 TM--RI----------TT---------------------S--EPKD--VAFVV--DGWALEIALKHYRKAFTE-LAILSR 721 (1104)
Q Consensus 682 ~~--~~----------~~---------------------~--~~~~--~~lvi--~g~~l~~~~~~~~~~f~~-l~~~~~ 721 (1104)
.. .. .. . .... ..++. +.+.++.+.+.+.+.|.. +.....
T Consensus 117 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~~l~~~~~~~~~~~~s 196 (285)
T 3pgv_A 117 DPKIVTNVYREDEWYMNRHRPEEMRFFKEAVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAMNARWGDRVNVSFS 196 (285)
T ss_dssp CTTCEEEEEETTEEEESSCC-----CTTSCCCCEEECCTTCSCCSSEEEEEEECSCHHHHHHHHHHHHHHHGGGEEEEES
T ss_pred cCCeEEEEEcCCcEEEcCCCHHHHHHHHhcCCccEEecHHHcCCCCceEEEEeCCCHHHHHHHHHHHHHHhcCCEEEEEe
Confidence 00 00 00 0 0011 11222 223344444445554432 222233
Q ss_pred ceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcce
Q 001304 722 TAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADY 783 (1104)
Q Consensus 722 ~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~ 783 (1104)
...+.++.|. .|+..++.+.+ . .+.+++|||+.||++|++.|++|||| ||+..++++.||+
T Consensus 197 ~~~~~ei~~~~~~K~~al~~l~~~lgi~~~~~ia~GD~~NDi~ml~~ag~~vAm-~Na~~~vk~~A~~ 263 (285)
T 3pgv_A 197 TLTCLEVMAGGVSKGHALEAVAKMLGYTLSDCIAFGDGMNDAEMLSMAGKGCIM-ANAHQRLKDLHPE 263 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCTT
T ss_pred CCceEEEecCCCChHHHHHHHHHHhCCCHHHEEEECCcHhhHHHHHhcCCEEEc-cCCCHHHHHhCCC
Confidence 3456677775 69998888765 2 36799999999999999999999999 9999999999985
|
| >1l6r_A Hypothetical protein TA0175; structural genomics, putative hydrolas midwest center for structural genomics, MCSG, PSI; 1.40A {Thermoplasma acidophilum} SCOP: c.108.1.10 PDB: 1kyt_A | Back alignment and structure |
|---|
Probab=99.04 E-value=3.4e-10 Score=120.44 Aligned_cols=172 Identities=17% Similarity=0.165 Sum_probs=103.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEe-cCC------cHHHHHHHHHHHHH
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSI-DGK------TEDEVCRSLERVLL 681 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~-~~~------~~~~~~~~~~~~~~ 681 (1104)
..++.+++.++|++|+++|++++++|||....+..++.++|+..+ ..++..+.. ++. .. +....+ +.+.
T Consensus 20 ~~~i~~~~~~~l~~l~~~g~~~~i~TGr~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~~i~~~~~l-~~~~~i-~~~~ 97 (227)
T 1l6r_A 20 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGSIKKFFSNE-GTNKFL-EEMS 97 (227)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEECTTSCEEESSCSH-HHHHHH-HHHT
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEECCCCcHHHHHHHHHhCCCCeEEEeCCcEEEeCCCCEEEEeccH-HHHHHH-HHHH
Confidence 346788899999999999999999999999999999999987432 001111111 121 11 222222 2221
Q ss_pred HccccCC------CCCceEE-EEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhc----CCeEE
Q 001304 682 TMRITTS------EPKDVAF-VVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSC----DYRTL 748 (1104)
Q Consensus 682 ~~~~~~~------~~~~~~l-vi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~----~~~v~ 748 (1104)
....... ...+... +..+. ....+.+.+.+ .+... ....+.+++| .+|+..++.+.+. .+.++
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~-~~~~~~ei~~~~~~K~~~l~~l~~~~~~~~~~~~ 173 (227)
T 1l6r_A 98 KRTSMRSILTNRWREASTGFDIDPED--VDYVRKEAESR-GFVIF-YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEIL 173 (227)
T ss_dssp TTSSCBCCGGGGGCSSSEEEBCCGGG--HHHHHHHHHTT-TEEEE-EETTEEEEEETTCSHHHHHHHHHHHTTCCGGGEE
T ss_pred HHhcCCccccccceecccceEEecCC--HHHHHHHHHhc-CEEEE-ecCcEEEEecCCCCHHHHHHHHHHHhCcCHHHEE
Confidence 1000000 0000000 00011 01111122222 22222 3334567778 4799999888752 35799
Q ss_pred EEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 749 AIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 749 ~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
++||+.||++|++.|++||+| ++....++..||+++.+.+
T Consensus 174 ~iGD~~nD~~m~~~ag~~va~-~n~~~~~k~~a~~v~~~~~ 213 (227)
T 1l6r_A 174 VIGDSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYSY 213 (227)
T ss_dssp EECCSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCCT
T ss_pred EECCcHHhHHHHHHcCceEEe-cCchHHHHHhCCEEecCCC
Confidence 999999999999999999999 7777778889999987543
|
| >3l7y_A Putative uncharacterized protein SMU.1108C; hydrolase; 2.00A {Streptococcus mutans} | Back alignment and structure |
|---|
Probab=98.99 E-value=5.3e-10 Score=124.81 Aligned_cols=176 Identities=14% Similarity=0.130 Sum_probs=108.0
Q ss_pred cCCCC-hHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC----CC-----CCeEEEecCCcHHHHHHHHHHHHHH
Q 001304 613 RLQDG-VPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP----EP-----KGQLLSIDGKTEDEVCRSLERVLLT 682 (1104)
Q Consensus 613 ~lr~~-~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 682 (1104)
.+.+. +.++|++++++|++++++||+....+..+...+++..+ +. .+..+.....+.+.+.+.++...+.
T Consensus 54 ~i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~ 133 (304)
T 3l7y_A 54 SYDHNRFQRILKQLQERDIRFVVASSNPYRQLREHFPDCHEQLTFVGENGANIISKNQSLIEVFQQREDIASIIYFIEEK 133 (304)
T ss_dssp CCCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHTTCTTTGGGSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhCCCCcEEeCCCcEEEECCEEEEEecCCHHHHHHHHHHHHHh
Confidence 34555 78999999999999999999999998887766654211 00 0112222222333333333322221
Q ss_pred c-c-------------------------------------cc---CCCCCceEEEEcchhHHHHHHHHHHHHHh--Hhhh
Q 001304 683 M-R-------------------------------------IT---TSEPKDVAFVVDGWALEIALKHYRKAFTE--LAIL 719 (1104)
Q Consensus 683 ~-~-------------------------------------~~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~--l~~~ 719 (1104)
. . .. .....+..+..+...++.+.+.+.+.+.. +...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 213 (304)
T 3l7y_A 134 YPQAVIALSGEKKGYLKKGVSENIVKMLSPFFPVLELVNSFSPLPDERFFKLTLQVKEEESAQIMKAIADYKTSQRLVGT 213 (304)
T ss_dssp CTTSEEEEEESSCEEEETTSCHHHHHHHTTSCSSEEEESCCSSCC-CCEEEEEEECCGGGHHHHHHHHHTSTTTTTEEEE
T ss_pred cCCeEEEEEcCCCEeeeCCCCHHHHHHHHHHhccceecCCHHHcCcCCeEEEEEEcCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 1 0 00 00001122223333444444444433432 3223
Q ss_pred ccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 720 SRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 720 ~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
.....+.++.|. .|+..++.+.+ . .+.+++|||+.||++|++.|++||+| ||+..+++..||+++.+.+
T Consensus 214 ~s~~~~~ei~~~~~~K~~al~~l~~~lgi~~~e~i~~GDs~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~~ 288 (304)
T 3l7y_A 214 ASGFGYIDIITKGLHKGWALQQLLKRWNFTSDHLMAFGDGGNDIEMLKLAKYSYAM-ANAPKNVKAAANYQAKSND 288 (304)
T ss_dssp ECSTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHCTEEEEC-TTSCHHHHHHCSEECCCGG
T ss_pred EcCCceEEEEcCCCCHHHHHHHHHHHhCcCHHHEEEECCCHHHHHHHHhcCCeEEc-CCcCHHHHHhccEEcCCCC
Confidence 333445666675 69988888765 2 36799999999999999999999999 8888889999999987543
|
| >3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.86 E-value=2.6e-09 Score=110.38 Aligned_cols=97 Identities=20% Similarity=0.136 Sum_probs=77.8
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
.+|+.|+++|+++.++||++...+..+++++|+..
T Consensus 59 ~~l~~L~~~G~~~~ivT~~~~~~~~~~l~~lgi~~--------------------------------------------- 93 (195)
T 3n07_A 59 YGVKALMNAGIEIAIITGRRSQIVENRMKALGISL--------------------------------------------- 93 (195)
T ss_dssp HHHHHHHHTTCEEEEECSSCCHHHHHHHHHTTCCE---------------------------------------------
T ss_pred HHHHHHHHCCCEEEEEECcCHHHHHHHHHHcCCcE---------------------------------------------
Confidence 44999999999999999999999999999999831
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchH
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 775 (1104)
++... +.|...++.+.+ ..+.++++||+.||++|++.|++|++| ++...
T Consensus 94 ------------------------~~~~~--k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~~ag~~va~-~na~~ 146 (195)
T 3n07_A 94 ------------------------IYQGQ--DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVMEKVALRVCV-ADGHP 146 (195)
T ss_dssp ------------------------EECSC--SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCH
T ss_pred ------------------------EeeCC--CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHCCCEEEE-CChHH
Confidence 11111 345555555443 346799999999999999999999999 77777
Q ss_pred HHhhhcceecccc
Q 001304 776 QAARAADYSIGKF 788 (1104)
Q Consensus 776 ~a~~~AD~vl~~f 788 (1104)
.++..||+++.+.
T Consensus 147 ~~~~~ad~v~~~~ 159 (195)
T 3n07_A 147 LLAQRANYVTHIK 159 (195)
T ss_dssp HHHHHCSEECSSC
T ss_pred HHHHhCCEEEcCC
Confidence 7888999999753
|
| >3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis} | Back alignment and structure |
|---|
Probab=98.85 E-value=6e-09 Score=109.10 Aligned_cols=107 Identities=17% Similarity=0.113 Sum_probs=84.3
Q ss_pred EEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHc
Q 001304 604 VLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTM 683 (1104)
Q Consensus 604 llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 683 (1104)
.+....+.|.+ +|+.|+++|+++.++||++...+..+++++|+..
T Consensus 73 ~~~~~~~~d~~------~L~~L~~~G~~l~I~T~~~~~~~~~~l~~lgi~~----------------------------- 117 (211)
T 3ij5_A 73 ELKAFNVRDGY------GIRCLITSDIDVAIITGRRAKLLEDRANTLGITH----------------------------- 117 (211)
T ss_dssp EEEEEEHHHHH------HHHHHHHTTCEEEEECSSCCHHHHHHHHHHTCCE-----------------------------
T ss_pred HHHHhccchHH------HHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCch-----------------------------
Confidence 44555555554 9999999999999999999999999999999821
Q ss_pred cccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccChhh
Q 001304 684 RITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRM 759 (1104)
Q Consensus 684 ~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~m 759 (1104)
++..+ +.|..+++.+.+ ..+.++++||+.||++|
T Consensus 118 ----------------------------------------~f~~~--k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~ 155 (211)
T 3ij5_A 118 ----------------------------------------LYQGQ--SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPV 155 (211)
T ss_dssp ----------------------------------------EECSC--SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred ----------------------------------------hhccc--CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHH
Confidence 11111 456666666554 25789999999999999
Q ss_pred hhhcCceEEecCCchHHHhhhcceecccc
Q 001304 760 IQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 760 l~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
++.|++++++ ++....++..||+++.+.
T Consensus 156 ~~~ag~~~a~-~~~~~~~~~~Ad~v~~~~ 183 (211)
T 3ij5_A 156 MAQVGLSVAV-ADAHPLLLPKAHYVTRIK 183 (211)
T ss_dssp HTTSSEEEEC-TTSCTTTGGGSSEECSSC
T ss_pred HHHCCCEEEe-CCccHHHHhhCCEEEeCC
Confidence 9999999999 666666777999999764
|
| >3fzq_A Putative hydrolase; YP_001086940.1, putative haloacid dehalogenase-like hydrolas structural genomics, joint center for structural genomics; HET: MSE; 2.10A {Clostridium difficile} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.85 E-value=8.2e-09 Score=113.00 Aligned_cols=172 Identities=13% Similarity=0.163 Sum_probs=102.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC-CCCCeEE-------EecCCcHHHHHHHHHHHHHH-c
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKGQLL-------SIDGKTEDEVCRSLERVLLT-M 683 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~-~~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~ 683 (1104)
.+.+.+.++|++++++|+++.++||++...+..+..++|+... ..++..+ .-...+.+.+.+.++...+. .
T Consensus 22 ~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 101 (274)
T 3fzq_A 22 GIPESAKHAIRLCQKNHCSVVICTGRSMGTIQDDVLSLGVDGYIAGGGNYIQYHGELLYNQSFNQRLIKEVVCLLKKREV 101 (274)
T ss_dssp BCCHHHHHHHHHHHHTTCEEEEECSSCTTTSCHHHHTTCCSEEEETTTTEEEETTEEEEECCCCHHHHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEEEecCccEEEECCEEEEEcCCCHHHHHHHHHHHHHCCc
Confidence 4678889999999999999999999999999888888776310 0001112 11222233333222221110 0
Q ss_pred cc--c-----------------------------------------------CCCCCceEEEEcchhHHHHHHHHHHHHH
Q 001304 684 RI--T-----------------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFT 714 (1104)
Q Consensus 684 ~~--~-----------------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~ 714 (1104)
.. . .....+..+. ... ...+.+.+.+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~~---~~~~~~~~~l~ 177 (274)
T 3fzq_A 102 AFSIESQEKVFMNQKAKEIFETMNQLKGTNSCINKQHIQEKITYENNIEEYKSQDIHKICLW-SNE---KVFDEVKDILQ 177 (274)
T ss_dssp EEEEECSSCEEECHHHHHHHHHHHHTTTSCCTTHHHHCCSSSCCCCCGGGCSSCCCCEEEEE-CCH---HHHHHHHHHHG
T ss_pred eEEEEeCCceEeCCchHHHHHHHHhhhccchhhhhhhhhhhcccccchhhhcccCeEEEEEE-cCH---HHHHHHHHHhh
Confidence 00 0 0011122222 111 11222333332
Q ss_pred h-Hhhhccce--eeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceec
Q 001304 715 E-LAILSRTA--ICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (1104)
Q Consensus 715 ~-l~~~~~~~--i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl 785 (1104)
. +....... .+.++.|. .|+..++.+.+ ..+.++++||+.||++|++.|++||+| |++..++++.||+++
T Consensus 178 ~~~~~~~~~~~~~~~ei~~~~~~K~~~l~~l~~~lgi~~~~~i~~GD~~NDi~m~~~ag~~vam-~na~~~~k~~A~~v~ 256 (274)
T 3fzq_A 178 DKMELAQRDISSQYYEIIQKDFHKGKAIKRLQERLGVTQKETICFGDGQNDIVMFQASDVTIAM-KNSHQQLKDIATSIC 256 (274)
T ss_dssp GGEEEEEEEGGGTEEEEEETTCSHHHHHHHHHHHHTCCSTTEEEECCSGGGHHHHHTCSEEEEE-TTSCHHHHHHCSEEE
T ss_pred cceEEEeccCCCceEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCChhHHHHHHhcCceEEe-cCccHHHHHhhhhee
Confidence 2 11111111 33456665 68888877665 346799999999999999999999999 888888999999999
Q ss_pred ccch
Q 001304 786 GKFR 789 (1104)
Q Consensus 786 ~~f~ 789 (1104)
.+.+
T Consensus 257 ~~~~ 260 (274)
T 3fzq_A 257 EDIF 260 (274)
T ss_dssp CCGG
T ss_pred CCCc
Confidence 7543
|
| >2pq0_A Hypothetical conserved protein GK1056; hyopthetical protein, structural genomics, unknown function; 2.60A {Geobacillus kaustophilus} PDB: 2qyh_A | Back alignment and structure |
|---|
Probab=98.84 E-value=1.6e-08 Score=109.69 Aligned_cols=172 Identities=19% Similarity=0.213 Sum_probs=100.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC-CCCC-------eEEEecCCcHHHHHHHHHHHHHHcc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP-EPKG-------QLLSIDGKTEDEVCRSLERVLLTMR 684 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1104)
.+.+.+.++|++++++|++++++||++...+..+..++++..- ..++ ..+.-...+.+.+...++.. +...
T Consensus 20 ~i~~~~~~al~~l~~~G~~~~~aTGR~~~~~~~~~~~l~~~~~i~~nGa~i~~~~~~i~~~~~~~~~~~~i~~~~-~~~~ 98 (258)
T 2pq0_A 20 QLPLSTIEAVRRLKQSGVYVAIATGRAPFMFEHVRKQLGIDSFVSFNGQYVVFEGNVLYKQPLRREKVRALTEEA-HKNG 98 (258)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGSHHHHHHHTCCCEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHH-HHTT
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHhcCCCEEEECCCCEEEECCEEEEEecCCHHHHHHHHHHH-HhCC
Confidence 4677889999999999999999999999999999888875210 0011 11111222333333322221 1110
Q ss_pred c----cCCC---------------------------------CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec
Q 001304 685 I----TTSE---------------------------------PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR 727 (1104)
Q Consensus 685 ~----~~~~---------------------------------~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r 727 (1104)
. .... ...+.+++.+..- ......+.+..+.......-+.+
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~e 176 (258)
T 2pq0_A 99 HPLVFMDAEKMRASIGDHPHIHVSMASLKFAHPPVDPLYYENKDIYQALLFCRAE--EEEPYVRNYPEFRFVRWHDVSTD 176 (258)
T ss_dssp CCEEEECSSCEEESSSSCHHHHHHHHHTTCCCCCBCTTGGGGSCCCEEEECSCHH--HHHHHHHHCTTEEEEEEETTEEE
T ss_pred CeEEEEeCCcEEEecCCcHHHHHHHHhhcCCccccccchhhccCceEEEEECCHH--HHHHHHHhCCCeEEEEeCCceEE
Confidence 0 0000 0011122222210 00111111111111111222344
Q ss_pred cChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 728 VTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 728 ~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
+.|. +|+..++.+.+ ..+.|+++||+.||++|++.|++||+| ||+..+++..||++..+.
T Consensus 177 i~~~~~~K~~~l~~l~~~lgi~~~~~ia~GDs~NDi~ml~~ag~~vam-~na~~~~k~~A~~v~~~~ 242 (258)
T 2pq0_A 177 VLPAGGSKAEGIRMMIEKLGIDKKDVYAFGDGLNDIEMLSFVGTGVAM-GNAHEEVKRVADFVTKPV 242 (258)
T ss_dssp EEESSCCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHHHSSEEEEE-TTCCHHHHHTCSEEECCG
T ss_pred EEECCCChHHHHHHHHHHhCCCHHHEEEECCcHHhHHHHHhCCcEEEe-CCCcHHHHHhCCEEeCCC
Confidence 5554 69988887765 246799999999999999999999999 888888888999998653
|
| >3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus} | Back alignment and structure |
|---|
Probab=98.82 E-value=4.8e-09 Score=105.42 Aligned_cols=107 Identities=17% Similarity=0.138 Sum_probs=83.9
Q ss_pred cCcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHH--HcCCCCCCCCCeEEEecCCcHHHHHHHHH
Q 001304 600 HDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL--SCNFISPEPKGQLLSIDGKTEDEVCRSLE 677 (1104)
Q Consensus 600 ~~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~--~~gi~~~~~~~~~~~~~~~~~~~~~~~~~ 677 (1104)
.+...++.+.++|. .+|+.|+++|+++.++||+ ..+..+++ .+|+.
T Consensus 29 ~~g~~~~~f~~~D~------~~L~~Lk~~Gi~~~I~Tg~--~~~~~~l~~l~lgi~------------------------ 76 (168)
T 3ewi_A 29 GDQKEIISYDVKDA------IGISLLKKSGIEVRLISER--ACSKQTLSALKLDCK------------------------ 76 (168)
T ss_dssp SSCCCEEEEEHHHH------HHHHHHHHTTCEEEEECSS--CCCHHHHHTTCCCCC------------------------
T ss_pred CCCCEEEEEecCcH------HHHHHHHHCCCEEEEEeCc--HHHHHHHHHhCCCcE------------------------
Confidence 34466777788877 3899999999999999999 67777888 44541
Q ss_pred HHHHHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-c---CCeEEEEcCC
Q 001304 678 RVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDG 753 (1104)
Q Consensus 678 ~~~~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~---~~~v~~iGDG 753 (1104)
++ ..+++|...++.+.+ . .+.++++||+
T Consensus 77 ----------------------------------------------~~--~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~ 108 (168)
T 3ewi_A 77 ----------------------------------------------TE--VSVSDKLATVDEWRKEMGLCWKEVAYLGNE 108 (168)
T ss_dssp ----------------------------------------------EE--CSCSCHHHHHHHHHHHTTCCGGGEEEECCS
T ss_pred ----------------------------------------------EE--ECCCChHHHHHHHHHHcCcChHHEEEEeCC
Confidence 01 113467777776654 2 4679999999
Q ss_pred ccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 754 GNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 754 ~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.||++|++.|+++++| ++....+++.||+++.+
T Consensus 109 ~nDi~~~~~ag~~~a~-~na~~~~k~~Ad~v~~~ 141 (168)
T 3ewi_A 109 VSDEECLKRVGLSAVP-ADACSGAQKAVGYICKC 141 (168)
T ss_dssp GGGHHHHHHSSEEEEC-TTCCHHHHTTCSEECSS
T ss_pred HhHHHHHHHCCCEEEe-CChhHHHHHhCCEEeCC
Confidence 9999999999999999 77777888899999975
|
| >3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=98.80 E-value=1.4e-08 Score=103.21 Aligned_cols=94 Identities=17% Similarity=0.164 Sum_probs=77.2
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+|+.|+++|+++.++||+....+..+++.+|+.
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~lgi~----------------------------------------------- 79 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARARKLKIP----------------------------------------------- 79 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHHHHTCC-----------------------------------------------
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHHHcCCe-----------------------------------------------
Confidence 999999999999999999999999999999972
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
++... +.|...++.+.+ . .+.++++||+.||++|++.|++|+++ ++....
T Consensus 80 -----------------------~~~~~--~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~~~~ag~~v~~-~~~~~~ 133 (176)
T 3mmz_A 80 -----------------------VLHGI--DRKDLALKQWCEEQGIAPERVLYVGNDVNDLPCFALVGWPVAV-ASAHDV 133 (176)
T ss_dssp -----------------------EEESC--SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHH
T ss_pred -----------------------eEeCC--CChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHCCCeEEC-CChhHH
Confidence 11111 456666665544 2 46799999999999999999999999 666666
Q ss_pred Hhhhcceeccc
Q 001304 777 AARAADYSIGK 787 (1104)
Q Consensus 777 a~~~AD~vl~~ 787 (1104)
++..||+++.+
T Consensus 134 ~~~~ad~v~~~ 144 (176)
T 3mmz_A 134 VRGAARAVTTV 144 (176)
T ss_dssp HHHHSSEECSS
T ss_pred HHHhCCEEecC
Confidence 77899999987
|
| >1k1e_A Deoxy-D-mannose-octulosonate 8-phosphate phosphat; structural genomics, KDO 8-P phosphatase, structure function project, S2F; HET: MES; 1.67A {Haemophilus influenzae RD} SCOP: c.108.1.5 PDB: 1j8d_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.4e-08 Score=103.83 Aligned_cols=102 Identities=15% Similarity=0.067 Sum_probs=80.0
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceE
Q 001304 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVA 694 (1104)
Q Consensus 615 r~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 694 (1104)
.+++.++|+.|+++|++++++||++...+..+++++|+.. .++
T Consensus 37 ~~~~~~~l~~L~~~G~~~~i~Tg~~~~~~~~~~~~lgl~~--------~~~----------------------------- 79 (180)
T 1k1e_A 37 HVRDGLGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------FFL----------------------------- 79 (180)
T ss_dssp EHHHHHHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE--------EEE-----------------------------
T ss_pred ccchHHHHHHHHHCCCeEEEEeCCCcHHHHHHHHHcCCce--------eec-----------------------------
Confidence 3456789999999999999999999999999999998721 001
Q ss_pred EEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-cC---CeEEEEcCCccChhhhhhcCceEEec
Q 001304 695 FVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-CD---YRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 695 lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~~---~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
. ...|...++.+.+ .+ +.++++||+.||++|++.|++++++
T Consensus 80 --------------------------------~--~k~k~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~- 124 (180)
T 1k1e_A 80 --------------------------------G--KLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV- 124 (180)
T ss_dssp --------------------------------S--CSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-
T ss_pred --------------------------------C--CCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEe-
Confidence 0 1345555554433 23 6899999999999999999999999
Q ss_pred CCchHHHhhhcceecccc
Q 001304 771 GREGLQAARAADYSIGKF 788 (1104)
Q Consensus 771 g~~~~~a~~~AD~vl~~f 788 (1104)
++....++..||+++.+.
T Consensus 125 ~~~~~~~~~~ad~v~~~~ 142 (180)
T 1k1e_A 125 ADAPIYVKNAVDHVLSTH 142 (180)
T ss_dssp TTSCHHHHTTSSEECSSC
T ss_pred CCccHHHHhhCCEEecCC
Confidence 666666777999999865
|
| >1rkq_A Hypothetical protein YIDA; two domain structure with beta-alpha sandwich. stucture contains A magnesium ION., PSI, protein structure initiative; 1.40A {Escherichia coli} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.77 E-value=2.1e-08 Score=110.45 Aligned_cols=175 Identities=18% Similarity=0.211 Sum_probs=104.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC-----CCCeEEEe--cC-------CcHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-----PKGQLLSI--DG-------KTEDEVCRSLER 678 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~-----~~~~~~~~--~~-------~~~~~~~~~~~~ 678 (1104)
.+.+++.++|++++++|++++++|||....+..+..++++..+. .++..+.. ++ .+.+.+.+.++.
T Consensus 22 ~i~~~~~~aL~~l~~~Gi~vviaTGR~~~~~~~~~~~l~l~~~~~~~I~~NGa~i~~~~~~~~i~~~~l~~~~~~~i~~~ 101 (282)
T 1rkq_A 22 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAADGSTVAQTALSYDDYRFLEKL 101 (282)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCEEEEGGGTEEEETTTCCEEEECCBCHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCCCCeEEEeCCeEEEECCCCeEEEEecCCHHHHHHHHHH
Confidence 46778999999999999999999999999999999999874311 11112221 12 122222222221
Q ss_pred HHHH-cc--cc--------C-----------------------------CCCCceEEEEcchhHHHHHHHHHHHHH-hHh
Q 001304 679 VLLT-MR--IT--------T-----------------------------SEPKDVAFVVDGWALEIALKHYRKAFT-ELA 717 (1104)
Q Consensus 679 ~~~~-~~--~~--------~-----------------------------~~~~~~~lvi~g~~l~~~~~~~~~~f~-~l~ 717 (1104)
..+. .. .. . ....++.+..+.+.++.+.+.+.+.+. .+.
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~ 181 (282)
T 1rkq_A 102 SREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKEKYT 181 (282)
T ss_dssp HHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHHHEE
T ss_pred HHHcCCEEEEEECCEEEEcCCchhHHHHHHhhhccCCccccchhHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEE
Confidence 1110 00 00 0 000011111111222233322222221 122
Q ss_pred hhccceeeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 718 ILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 718 ~~~~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
......-+.+++|. .|+..++.+.+. .+.++++||+.||++|++.|++||+| |++...++..||+++.+.
T Consensus 182 ~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~a~~v~~~~ 257 (282)
T 1rkq_A 182 VLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKSN 257 (282)
T ss_dssp EEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCCT
T ss_pred EEEeCCceEEecCCCCCCHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHCCcEEEe-cCCcHHHHhhCCEEecCC
Confidence 22222335677777 799988887652 35799999999999999999999999 777677778999998753
|
| >3r4c_A Hydrolase, haloacid dehalogenase-like hydrolase; haloalkanoate dehalogenase enzyme superfamily, phosphohydrol hydrolase; 1.82A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.75 E-value=1.1e-08 Score=111.71 Aligned_cols=64 Identities=30% Similarity=0.470 Sum_probs=53.8
Q ss_pred eeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 725 CCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 725 ~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
+.++.|. .|+..++.+.+ . .+.++++||+.||++|++.|++||+| ||+..++++.||++..+.+
T Consensus 185 ~~ei~~~~~~K~~~l~~l~~~lgi~~~~~ia~GD~~NDi~m~~~ag~~vam-~na~~~~k~~Ad~v~~~~~ 254 (268)
T 3r4c_A 185 FADVNVAGTSKATGLSLFADYYRVKVSEIMACGDGGNDIPMLKAAGIGVAM-GNASEKVQSVADFVTDTVD 254 (268)
T ss_dssp EEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHTCSEECCCTT
T ss_pred eEEEeeCCCCHHHHHHHHHHHcCCCHHHEEEECCcHHhHHHHHhCCCeEEe-CCCcHHHHHhcCEeeCCCC
Confidence 4556665 69988887765 2 35799999999999999999999999 8988889999999997543
|
| >3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.73 E-value=2.6e-08 Score=102.78 Aligned_cols=114 Identities=19% Similarity=0.170 Sum_probs=83.5
Q ss_pred HHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcchh
Q 001304 622 IETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWA 701 (1104)
Q Consensus 622 I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~~ 701 (1104)
|+.|+++|+++.++||++...+..+++.+|+..
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~lgl~~----------------------------------------------- 87 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQLGITH----------------------------------------------- 87 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHHHTCCE-----------------------------------------------
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHHcCCcc-----------------------------------------------
Confidence 999999999999999999999999999999832
Q ss_pred HHHHHHHHHHHHHhHhhhccceeeecc--ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhh
Q 001304 702 LEIALKHYRKAFTELAILSRTAICCRV--TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR 779 (1104)
Q Consensus 702 l~~~~~~~~~~f~~l~~~~~~~i~~r~--sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~ 779 (1104)
++..+ .|+-...+++.+.-..+.++++||+.||++|++.|++++++ ++....++.
T Consensus 88 ----------------------~~~~~kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~~~~ 144 (191)
T 3n1u_A 88 ----------------------YYKGQVDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLIQQVGLGVAV-SNAVPQVLE 144 (191)
T ss_dssp ----------------------EECSCSSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTCCHHHHH
T ss_pred ----------------------ceeCCCChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHHHHCCCEEEe-CCccHHHHH
Confidence 11111 22233334444444457899999999999999999999999 666667778
Q ss_pred hcceecccch------hhHHHHHhhhhhhhhhh
Q 001304 780 AADYSIGKFR------FLKRLILVHGRYSYNRT 806 (1104)
Q Consensus 780 ~AD~vl~~f~------~l~~lll~~GR~~~~~i 806 (1104)
.||+++.+.. .+... +...|..+.++
T Consensus 145 ~ad~v~~~~~~~g~~~~l~~~-ll~~~~~~~~~ 176 (191)
T 3n1u_A 145 FADWRTERTGGRGAVRELCDL-ILNAQNKAELA 176 (191)
T ss_dssp HSSEECSSCTTTTHHHHHHHH-HHHHTTCHHHH
T ss_pred hCCEEecCCCCCcHHHHHHHH-HHHhcCcHHHH
Confidence 9999998633 23333 34455555554
|
| >1rlm_A Phosphatase; HAD family, rossman fold, hydrolase; 1.90A {Escherichia coli} SCOP: c.108.1.10 PDB: 1rlt_A 1rlo_A* 2hf2_A | Back alignment and structure |
|---|
Probab=98.72 E-value=3.2e-08 Score=108.30 Aligned_cols=175 Identities=17% Similarity=0.197 Sum_probs=101.5
Q ss_pred CCCCh-HHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeE-------EEecCCcHHHHHHHHHHHHHHc
Q 001304 614 LQDGV-PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQL-------LSIDGKTEDEVCRSLERVLLTM 683 (1104)
Q Consensus 614 lr~~~-~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 683 (1104)
+.+.+ .++|++|+++|++++++|||+...+..+..++++..+ ..++.. +.-...+.+.+.+.++...+..
T Consensus 21 i~~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~i~~~~l~~~~~~~i~~~~~~~~ 100 (271)
T 1rlm_A 21 YNQPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDK 100 (271)
T ss_dssp CCHHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTCT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHhcCCCCEEEECCccEEEECCeEEEEecCCHHHHHHHHHHHHhCC
Confidence 55564 8999999999999999999999988877766653211 001111 2212223333333222221110
Q ss_pred cc-------------------------------c--CC----CCC--ceEEEEcchhHHHHHHHHHHHHHh-Hhhhccce
Q 001304 684 RI-------------------------------T--TS----EPK--DVAFVVDGWALEIALKHYRKAFTE-LAILSRTA 723 (1104)
Q Consensus 684 ~~-------------------------------~--~~----~~~--~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~~~~ 723 (1104)
.. . .. ... +..+..+....+.+.+.+.+.+.. +.......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~i~~~~~~~~~~~~~l~~~~~~~~~~~~s~~ 180 (271)
T 1rlm_A 101 QLNFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGF 180 (271)
T ss_dssp TCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECST
T ss_pred CccEEEEeCCCEEeeCCCCHHHHHHHHHhCCCCEEeCchhhCCCceEEEEEEcCHHHHHHHHHHHHHHcCCcEEEEeccC
Confidence 00 0 00 001 112222333344444444433322 11111222
Q ss_pred eeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 724 ICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
-+.++.|. .|+..++.+.+. .+.++++||+.||++|++.|++||+| |++..+++..||+++.+.+
T Consensus 181 ~~~ei~~~~~~K~~~~~~l~~~l~i~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~~~ 251 (271)
T 1rlm_A 181 GFIDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDDNN 251 (271)
T ss_dssp TEEEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCCGG
T ss_pred CeEEEEcCCCChHHHHHHHHHHhCCCHHHEEEECCcHHHHHHHHHcCCeEEe-CCccHHHHHhCCeeCcCCC
Confidence 23355555 799888877652 35799999999999999999999999 7877778889999987543
|
| >2b30_A Pvivax hypothetical protein; SGPP, structural genomics, PSI, protein structure initiative; 2.70A {Plasmodium vivax} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.72 E-value=6.2e-08 Score=107.66 Aligned_cols=175 Identities=14% Similarity=0.164 Sum_probs=104.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHH--HHcC-CCCCC-----CCCeEEEe-cC-------CcHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA--LSCN-FISPE-----PKGQLLSI-DG-------KTEDEVCRSL 676 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia--~~~g-i~~~~-----~~~~~~~~-~~-------~~~~~~~~~~ 676 (1104)
.+.+.+.++|++|+++|++++++|||....+..+. .+++ +..+. .+|..+.. ++ -+.+.+...+
T Consensus 45 ~is~~~~~al~~l~~~Gi~v~iaTGR~~~~~~~~~~~~~l~~~~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~ 124 (301)
T 2b30_A 45 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELI 124 (301)
T ss_dssp CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHhhHHhhcccccCCCeEEEcCCeEEEeCCCCEEEEccCCHHHHHHHH
Confidence 47778999999999999999999999999999998 8777 53110 01112221 22 2223333322
Q ss_pred HHHHH-Hc-c--cc--C------CC--C---------------------------CceEEEEcchhHHHHHHHHHHHHH-
Q 001304 677 ERVLL-TM-R--IT--T------SE--P---------------------------KDVAFVVDGWALEIALKHYRKAFT- 714 (1104)
Q Consensus 677 ~~~~~-~~-~--~~--~------~~--~---------------------------~~~~lvi~g~~l~~~~~~~~~~f~- 714 (1104)
+...+ .. . .. . .. . .++.+..+...++.+.+.+.+.|.
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~~~~~~~~~~l~~~~~~ 204 (301)
T 2b30_A 125 SYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKN 204 (301)
T ss_dssp HHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTT
T ss_pred HHHHHcCCceEEEEEeCCEEEEcCchHHHHHHHHhhccCCceeecchhhhccCCceEEEEECCHHHHHHHHHHHHHHhcC
Confidence 22111 01 0 00 0 00 0 000001111223333333333221
Q ss_pred hHhhhccceeeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecc-c
Q 001304 715 ELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIG-K 787 (1104)
Q Consensus 715 ~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~-~ 787 (1104)
.+........+.+++|. .|+..++.+.+ . .+.++++||+.||++|++.|++||+| |++...++..||+++. +
T Consensus 205 ~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~~~k~~a~~v~~~~ 283 (301)
T 2b30_A 205 KLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLPVS 283 (301)
T ss_dssp TEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECSSC
T ss_pred CEEEEEeCCcceEecCCCCCcHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCeEEE-cCCcHHHHhhCCEEEccC
Confidence 12222223345677777 79999888775 2 35799999999999999999999999 7777778889999987 5
Q ss_pred c
Q 001304 788 F 788 (1104)
Q Consensus 788 f 788 (1104)
.
T Consensus 284 ~ 284 (301)
T 2b30_A 284 H 284 (301)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae} | Back alignment and structure |
|---|
Probab=98.71 E-value=2.1e-08 Score=113.47 Aligned_cols=123 Identities=22% Similarity=0.242 Sum_probs=85.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||+....+..++..+|+...-.. .+.+.
T Consensus 178 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~lgl~~~~~~--~l~~~--------------------------- 228 (335)
T 3n28_A 178 PLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQLSLDYAQSN--TLEIV--------------------------- 228 (335)
T ss_dssp CCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEE---------------------------
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHcCCCeEEee--eeEee---------------------------
Confidence 6899999999999999999999999999999999999998321000 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceee-eccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~-~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
+|. . ...+. --..++.|...++.+.+ ..+.++++|||.||++|++.||+|+
T Consensus 229 -----d~~------------------~-tg~~~~~~~~~kpk~~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~v 284 (335)
T 3n28_A 229 -----SGK------------------L-TGQVLGEVVSAQTKADILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGV 284 (335)
T ss_dssp -----TTE------------------E-EEEEESCCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred -----CCe------------------e-eeeecccccChhhhHHHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeE
Confidence 000 0 00000 01123456655554433 3478999999999999999999999
Q ss_pred EecCCchHHHhhhcceecccchh
Q 001304 768 GISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
+| +....++..||+++...++
T Consensus 285 a~--~~~~~~~~~a~~v~~~~~l 305 (335)
T 3n28_A 285 AY--HAKPKVEAKAQTAVRFAGL 305 (335)
T ss_dssp EE--SCCHHHHTTSSEEESSSCT
T ss_pred Ee--CCCHHHHhhCCEEEecCCH
Confidence 99 4445577899998854333
|
| >1nf2_A Phosphatase; structural proteomics, HAD NEW fold, structural genomics, BSGC structure funded by NIH structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.69 E-value=5.7e-08 Score=106.11 Aligned_cols=173 Identities=11% Similarity=0.136 Sum_probs=102.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC-C--CC--------CCeEEEecCCcHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EP--------KGQLLSIDGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~-~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 681 (1104)
.+.+.+.++|++ +++|++++++|||....+..+...+|+.. + .. .+.++.....+.+.+.+.++ .+.
T Consensus 19 ~i~~~~~~al~~-~~~Gi~v~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~i~~~~l~~~~~~~i~~-~~~ 96 (268)
T 1nf2_A 19 EISEKDRRNIEK-LSRKCYVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDIIE-YIK 96 (268)
T ss_dssp CCCHHHHHHHHH-HTTTSEEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHHHHH-HHG
T ss_pred ccCHHHHHHHHH-HhCCCEEEEECCCChHHHHHHHHHhCCCCCeEEEeCCeEEECCCCCEEEecCCCHHHHHHHHH-HHH
Confidence 466778999999 99999999999999999999999998743 1 00 11122222222233322222 221
Q ss_pred Hccc----cCC------------------------------------CCCceEEEEcchhHHHHHHHHHHHHH-hHhhhc
Q 001304 682 TMRI----TTS------------------------------------EPKDVAFVVDGWALEIALKHYRKAFT-ELAILS 720 (1104)
Q Consensus 682 ~~~~----~~~------------------------------------~~~~~~lvi~g~~l~~~~~~~~~~f~-~l~~~~ 720 (1104)
.... ... ...++.+..+...++.+.+.+.+.+. .+....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (268)
T 1nf2_A 97 PLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFK 176 (268)
T ss_dssp GGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred hCCCEEEEEECCEEEECCChHHHHHHHhhcCCceEecCCHHHhcccCCceEEEEECCHHHHHHHHHHHHHHhcCCEEEEE
Confidence 1100 000 00001111111122222222222221 111111
Q ss_pred cceeeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 721 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 721 ~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
...-+.+++|. .|+..++.+.+ ..+.++++||+.||++|++.|++|++| |++...++..||+++.+.
T Consensus 177 s~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~ 249 (268)
T 1nf2_A 177 SFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLTN 249 (268)
T ss_dssp EETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCCT
T ss_pred ecCceEEEeCCCCChHHHHHHHHHHcCCCHHHeEEEcCchhhHHHHHHcCCEEEe-cCCCHHHHhhCCEEEccC
Confidence 22234577776 79988887765 236799999999999999999999999 777777788899998753
|
| >3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A* | Back alignment and structure |
|---|
Probab=98.67 E-value=5.4e-08 Score=97.58 Aligned_cols=97 Identities=21% Similarity=0.108 Sum_probs=76.2
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+++.|+++|+++.++||++...+..++..+|+...
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~gl~~~--------------------------------------------- 73 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEKLKVDYL--------------------------------------------- 73 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHHTTCSEE---------------------------------------------
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHHcCCCEe---------------------------------------------
Confidence 89999999999999999999999999999998321
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
+... +.|...++.+.+ ..+.++++||+.||++|.+.|++++++ ++....
T Consensus 74 ------------------------~~~~--kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~~~ag~~~~~-~~~~~~ 126 (164)
T 3e8m_A 74 ------------------------FQGV--VDKLSAAEELCNELGINLEQVAYIGDDLNDAKLLKRVGIAGVP-ASAPFY 126 (164)
T ss_dssp ------------------------ECSC--SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHHHTTSSEEECC-TTSCHH
T ss_pred ------------------------eccc--CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEc-CChHHH
Confidence 1111 334444443332 346899999999999999999999999 666667
Q ss_pred Hhhhcceecccch
Q 001304 777 AARAADYSIGKFR 789 (1104)
Q Consensus 777 a~~~AD~vl~~f~ 789 (1104)
+++.||+++.+.+
T Consensus 127 ~~~~ad~v~~~~~ 139 (164)
T 3e8m_A 127 IRRLSTIFLEKRG 139 (164)
T ss_dssp HHTTCSSCCCCCT
T ss_pred HHHhCcEEeccCC
Confidence 7789999998733
|
| >1u02_A Trehalose-6-phosphate phosphatase related protein; structural genomics, PSI; 1.92A {Thermoplasma acidophilum} SCOP: c.108.1.15 | Back alignment and structure |
|---|
Probab=98.66 E-value=2.7e-08 Score=106.69 Aligned_cols=164 Identities=13% Similarity=0.158 Sum_probs=94.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc-CCCCCCCCCeEEEecCCc------H--HHHHH-HHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC-NFISPEPKGQLLSIDGKT------E--DEVCR-SLERVLLT 682 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~-gi~~~~~~~~~~~~~~~~------~--~~~~~-~~~~~~~~ 682 (1104)
.+.+.+.++|++|+++| +++++|||....+..+...+ .++.. ++..+..+|.. . ..+.. ......+.
T Consensus 23 ~i~~~~~~al~~l~~~g-~v~iaTGR~~~~~~~~~~~l~~~I~~--nGa~i~~~~~~~~~~~~~~~~~l~~~~~~~i~~~ 99 (239)
T 1u02_A 23 YADAGLLSLISDLKERF-DTYIVTGRSPEEISRFLPLDINMICY--HGACSKINGQIVYNNGSDRFLGVFDRIYEDTRSW 99 (239)
T ss_dssp CCCHHHHHHHHHHHHHS-EEEEECSSCHHHHHHHSCSSCEEEEG--GGTEEEETTEEEECTTGGGGHHHHHHHHHHHTTH
T ss_pred CCCHHHHHHHHHHhcCC-CEEEEeCCCHHHHHHHhccchheEEE--CCEEEeeCCeeeecccccccchhhHHHHHHHHHH
Confidence 46788999999999999 99999999999988877654 11111 12223333333 1 11111 11111111
Q ss_pred ccccCC---CCCceEEEEc--------chhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHhcCCeEEE
Q 001304 683 MRITTS---EPKDVAFVVD--------GWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKSCDYRTLA 749 (1104)
Q Consensus 683 ~~~~~~---~~~~~~lvi~--------g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~~~~~v~~ 749 (1104)
...... ......+... ...++.+.+.+.+. ..+. ......+.+++|. +|+..++.+.+.-. |++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~-~~~~~~~lei~~~~~~Kg~al~~l~~~~g-via 176 (239)
T 1u02_A 100 VSDFPGLRIYRKNLAVLYHLGLMGADMKPKLRSRIEEIARI-FGVE-TYYGKMIIELRVPGVNKGSAIRSVRGERP-AII 176 (239)
T ss_dssp HHHSTTCEEEEETTEEEEECTTSCSTTHHHHHHHHHHHHHH-HTCE-EEECSSEEEEECTTCCHHHHHHHHHTTSC-EEE
T ss_pred HhhCCCcEEEecCCEEEEEcCCCChhHHHHHHHHHHHHhcc-CCcE-EEeCCcEEEEEcCCCCHHHHHHHHHhhCC-eEE
Confidence 100000 0001111110 01122222222221 1221 1223345678887 79999999987433 999
Q ss_pred EcCCccChhhhhhc--CceEEecCCchHHHhhhcceeccc
Q 001304 750 IGDGGNDVRMIQKA--DIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 750 iGDG~ND~~ml~~A--dvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
+||+.||.+||+.| ++||+| ||+ +..||+++.+
T Consensus 177 ~GD~~ND~~Ml~~a~~g~~vam-~Na----~~~A~~v~~~ 211 (239)
T 1u02_A 177 AGDDATDEAAFEANDDALTIKV-GEG----ETHAKFHVAD 211 (239)
T ss_dssp EESSHHHHHHHHTTTTSEEEEE-SSS----CCCCSEEESS
T ss_pred EeCCCccHHHHHHhhCCcEEEE-CCC----CCcceEEeCC
Confidence 99999999999999 999999 775 5689998866
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* | Back alignment and structure |
|---|
Probab=98.62 E-value=6.1e-08 Score=104.20 Aligned_cols=168 Identities=15% Similarity=0.243 Sum_probs=100.6
Q ss_pred ChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH-------HHHHH---------HHHHHH
Q 001304 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE-------DEVCR---------SLERVL 680 (1104)
Q Consensus 617 ~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~-------~~~~~---------~~~~~~ 680 (1104)
.+.++|++++ +|++++++|||+...+..+..++++..++ .++..+|... .+... .+....
T Consensus 23 ~~~~~l~~~~-~gi~v~iaTGR~~~~~~~~~~~l~l~~~~---~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (244)
T 1s2o_A 23 HLQEYLGDRR-GNFYLAYATGRSYHSARELQKQVGLMEPD---YWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIA 98 (244)
T ss_dssp HHHHHHHTTG-GGEEEEEECSSCHHHHHHHHHHHTCCCCS---EEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHhc-CCCEEEEEcCCCHHHHHHHHHHcCCCCCC---EEEECCCcEEEeCCCcChHHHHHHhccccHHHHHHHH
Confidence 4556777755 68999999999999999999998874321 1333343221 11111 111111
Q ss_pred HHccc---c---CCCCCceEEEEcchhHHHHHHHHHHHHHh----HhhhccceeeeccChh--hHHHHHHHHHhc----C
Q 001304 681 LTMRI---T---TSEPKDVAFVVDGWALEIALKHYRKAFTE----LAILSRTAICCRVTPS--QKAQLVELLKSC----D 744 (1104)
Q Consensus 681 ~~~~~---~---~~~~~~~~lvi~g~~l~~~~~~~~~~f~~----l~~~~~~~i~~r~sP~--qK~~iV~~lk~~----~ 744 (1104)
..... . .....+..+..+........+.+.+.+.. +....+...+.+++|. .|+..++.+.+. .
T Consensus 99 ~~~~~~~~~~~~~~~~~ki~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~lei~~~~~~K~~~l~~l~~~~~~~~ 178 (244)
T 1s2o_A 99 DGFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEP 178 (244)
T ss_dssp HTCTTEEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCG
T ss_pred HhccCccccCcccCCCeEEEEEeChhhHHHHHHHHHHHHHhcCCCeEEEEecCceEEeccCCCChHHHHHHHHHHhCCCH
Confidence 11110 0 11122333443433322333334443332 2111222345677887 699988887752 3
Q ss_pred CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhh-------cceecccch
Q 001304 745 YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARA-------ADYSIGKFR 789 (1104)
Q Consensus 745 ~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~-------AD~vl~~f~ 789 (1104)
+.++++||+.||.+|++.|++||+| |++...++.. ||++..+..
T Consensus 179 ~~~~~~GD~~nD~~m~~~~g~~va~-~na~~~~k~~a~~~~~~a~~v~~~~~ 229 (244)
T 1s2o_A 179 SQTLVCGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWGDSRHYRAQSSH 229 (244)
T ss_dssp GGEEEEECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHCCTTEEECSSCH
T ss_pred HHEEEECCchhhHHHHhccCcEEEE-cCCcHHHHHHHhcccccceeecCCcc
Confidence 5799999999999999999999999 7877777774 789887543
|
| >1nrw_A Hypothetical protein, haloacid dehalogenase-like hydrolase; structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=2.7e-07 Score=101.89 Aligned_cols=65 Identities=25% Similarity=0.208 Sum_probs=52.8
Q ss_pred eeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 724 ICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
-+.+++|. +|+..++.+.+. .+.++++||+.||++|++.|++||+| +++..+++..||+++.+.+
T Consensus 206 ~~lei~~~~~~K~~~~~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~~~~~~~~~~a~~v~~~~~ 276 (288)
T 1nrw_A 206 HNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLTND 276 (288)
T ss_dssp TEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCCGG
T ss_pred CcEEEecCCCChHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHHHcCcEEEE-cCCCHHHHhhCceeecCCC
Confidence 34566666 698888877752 35799999999999999999999999 7777778888999987543
|
| >1wr8_A Phosphoglycolate phosphatase; alpha / beta core domain, HAD superfamily, structural genomi structural genomics/proteomics initiative, RSGI; 1.60A {Pyrococcus horikoshii} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.59 E-value=1.2e-07 Score=101.04 Aligned_cols=174 Identities=17% Similarity=0.204 Sum_probs=101.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEecCC-----cHHHHHHHHHHHHHHc-
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSIDGK-----TEDEVCRSLERVLLTM- 683 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~- 683 (1104)
..+.+.+.+++++++++|++++++||+....+..+...+|+..+ ..++..+..++. ..+...+.++...+..
T Consensus 19 ~~i~~~~~~al~~l~~~G~~v~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~l~~~~~i~~~~~~~~~ 98 (231)
T 1wr8_A 19 RMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFP 98 (231)
T ss_dssp SCBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCT
T ss_pred CcCCHHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHcCCCCeEEEeCCcEEEeCCEEEEeccHHHHHHHHHHHHHhCC
Confidence 34678889999999999999999999999999999998886321 000111111111 1122222222221021
Q ss_pred cccCCC-----CCceEEEEc-chhHHHHHHHHHHHHHh-HhhhccceeeeccChh--hHHHHHHHHHh----cCCeEEEE
Q 001304 684 RITTSE-----PKDVAFVVD-GWALEIALKHYRKAFTE-LAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAI 750 (1104)
Q Consensus 684 ~~~~~~-----~~~~~lvi~-g~~l~~~~~~~~~~f~~-l~~~~~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~i 750 (1104)
...... ..... +.+ +..-+. .+...+.+.. +... ....+.++.|. .|...++.+.+ ..+.++++
T Consensus 99 ~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~ei~~~~~~K~~~~~~~~~~~~~~~~~~~~i 175 (231)
T 1wr8_A 99 NARTSYTMPDRRAGLV-IMRETINVET-VREIINELNLNLVAV-DSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHV 175 (231)
T ss_dssp TCCBCTTGGGCSSCEE-ECTTTSCHHH-HHHHHHHTTCSCEEE-ECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEE
T ss_pred CceEEecCCCceeeEE-EECCCCCHHH-HHHHHHhcCCcEEEE-ecCcEEEEecCCCChHHHHHHHHHHcCCCHHHEEEE
Confidence 111000 01122 222 111111 1222222211 1111 12234456554 68888887664 23679999
Q ss_pred cCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 751 GDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 751 GDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
||+.||++|++.|++|++| ++...+++..||+++.+.+
T Consensus 176 GD~~nD~~~~~~ag~~v~~-~~~~~~~~~~a~~v~~~~~ 213 (231)
T 1wr8_A 176 GDGENDLDAFKVVGYKVAV-AQAPKILKENADYVTKKEY 213 (231)
T ss_dssp ECSGGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSSCH
T ss_pred CCCHHHHHHHHHcCCeEEe-cCCCHHHHhhCCEEecCCC
Confidence 9999999999999999999 7766677778999987643
|
| >2zos_A MPGP, mannosyl-3-phosphoglycerate phosphatase; haloacid dehalogenase like hydrolase, mannosylglycerate, cytoplasm, hydrolase, magnesium; 1.70A {Pyrococcus horikoshii} PDB: 1wzc_A | Back alignment and structure |
|---|
Probab=98.56 E-value=1e-07 Score=102.82 Aligned_cols=166 Identities=13% Similarity=0.085 Sum_probs=95.9
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCC---------------------eEEEecCCcHHHH
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKG---------------------QLLSIDGKTEDEV 672 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~---------------------~~~~~~~~~~~~~ 672 (1104)
+.+.++|++|+++|++++++||+....+..+...+|+..+ ..++ .++.....+.+.+
T Consensus 20 ~~~~~~l~~l~~~g~~~~i~Tgr~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~ 99 (249)
T 2zos_A 20 DPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVETPFISENGSAIFIPKGYFPFDVKGKEVGNYIVIELGIRVEKI 99 (249)
T ss_dssp GGGHHHHHHHHHTTEEEEEBCSSCHHHHHHHHHHHTCCSCEEETTTTEEECCTTCCC------CCCCCCEEECSCCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCccEEEeCCeEEEccCCcccccccccccCceEEEecCCCHHHH
Confidence 4499999999999999999999999999999998886321 0111 1122222233333
Q ss_pred HHHHHHHHHH-----cc------------ccCC-------CCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc
Q 001304 673 CRSLERVLLT-----MR------------ITTS-------EPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV 728 (1104)
Q Consensus 673 ~~~~~~~~~~-----~~------------~~~~-------~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~ 728 (1104)
...++...+. .. .... ......++..+..-. .+.+.+ + .+.... ..-+.++
T Consensus 100 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~-~-~~~~~~-s~~~~ei 174 (249)
T 2zos_A 100 REELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEWSRDGW--EEVLVE-G-GFKVTM-GSRFYTV 174 (249)
T ss_dssp HHHHHHHHHHHTCEEGGGSCHHHHHHHHCCCTTTHHHHHCCSSCEEEEECSSSCH--HHHHHH-T-TCEEEE-CSSSEEE
T ss_pred HHHHHHHHhhcCEEEecCCCHHHHHHHhCCChhHhhhhhhhhhcCceEecCCHHH--HHHHHh-C-CEEEEe-cCCeEEE
Confidence 3222221111 00 0000 000111222221111 111111 1 111111 1224566
Q ss_pred Ch-hhHHHHHHHHHhc-----CCeEEEEcCCccChhhhhhcCceEEecCCch-HHHhhhcceeccc
Q 001304 729 TP-SQKAQLVELLKSC-----DYRTLAIGDGGNDVRMIQKADIGVGISGREG-LQAARAADYSIGK 787 (1104)
Q Consensus 729 sP-~qK~~iV~~lk~~-----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~-~~a~~~AD~vl~~ 787 (1104)
+| .+|+..++.+.+. .+.|+++|||.||++||+.|++||+| |++. ..++..||+++.+
T Consensus 175 ~~g~sKg~al~~l~~~~~~~~~~~viafGD~~NDi~Ml~~ag~~va~-gna~~~~~~~~a~~v~~~ 239 (249)
T 2zos_A 175 HGNSDKGKAAKILLDFYKRLGQIESYAVGDSYNDFPMFEVVDKVFIV-GSLKHKKAQNVSSIIDVL 239 (249)
T ss_dssp ECSCCHHHHHHHHHHHHHTTSCEEEEEEECSGGGHHHHTTSSEEEEE-SSCCCTTEEEESSHHHHH
T ss_pred eCCCChHHHHHHHHHHhccCCCceEEEECCCcccHHHHHhCCcEEEe-CCCCccccchhceEEecc
Confidence 66 3499888877642 35799999999999999999999999 7765 4566688988765
|
| >2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A* | Back alignment and structure |
|---|
Probab=98.49 E-value=3.3e-07 Score=94.21 Aligned_cols=96 Identities=17% Similarity=0.098 Sum_probs=73.8
Q ss_pred HHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcch
Q 001304 621 TIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGW 700 (1104)
Q Consensus 621 ~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g~ 700 (1104)
+|+.|+++|+++.++||++...+..+++.+|+...
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~~~~~l~~lgl~~~--------------------------------------------- 95 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKLVEDRCATLGITHL--------------------------------------------- 95 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHHHHHHHHHHTCCEE---------------------------------------------
T ss_pred HHHHHHHCCCeEEEEeCCChHHHHHHHHHcCCcee---------------------------------------------
Confidence 89999999999999999999999999999887310
Q ss_pred hHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHH
Q 001304 701 ALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQ 776 (1104)
Q Consensus 701 ~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~ 776 (1104)
+.. .+.|...++.+.+ . .+.+++|||+.||++|.+.|++++++ ++....
T Consensus 96 ------------------------~~~--~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a~~ag~~~~~-~~~~~~ 148 (188)
T 2r8e_A 96 ------------------------YQG--QSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVMEKVGLSVAV-ADAHPL 148 (188)
T ss_dssp ------------------------ECS--CSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHTTSSEEEEC-TTSCTT
T ss_pred ------------------------ecC--CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCEEEe-cCcCHH
Confidence 001 1234444444332 2 36799999999999999999999998 555555
Q ss_pred Hhhhcceecccc
Q 001304 777 AARAADYSIGKF 788 (1104)
Q Consensus 777 a~~~AD~vl~~f 788 (1104)
++..||+++.+.
T Consensus 149 ~~~~ad~v~~~~ 160 (188)
T 2r8e_A 149 LIPRADYVTRIA 160 (188)
T ss_dssp TGGGSSEECSSC
T ss_pred HHhcCCEEEeCC
Confidence 666899999875
|
| >1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A* | Back alignment and structure |
|---|
Probab=98.48 E-value=3.1e-07 Score=95.53 Aligned_cols=120 Identities=23% Similarity=0.297 Sum_probs=81.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.++++++++.++++|+++.++||+....+..+...+|+...-.. .....
T Consensus 76 ~l~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~~~~~~~~~~~~~--~~~~~--------------------------- 126 (211)
T 1l7m_A 76 TPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVK--------------------------- 126 (211)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEE---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCCCeEEEe--eeEEE---------------------------
Confidence 5678999999999999999999999998888888888776210000 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-cChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
++ .. ...+... ..+..|...+..+.+ . .+.++++||+.||++|++.|++++
T Consensus 127 -----~~------------------~~-~~~~~~~~~~~~~K~~~l~~~~~~lgi~~~~~~~iGD~~~Di~~~~~ag~~~ 182 (211)
T 1l7m_A 127 -----DG------------------KL-TGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKI 182 (211)
T ss_dssp -----TT------------------EE-EEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEE
T ss_pred -----CC------------------EE-cCCcccCccCCccHHHHHHHHHHHcCCCHHHEEEEecChhHHHHHHHCCCEE
Confidence 00 00 0011111 123567766665543 2 357999999999999999999999
Q ss_pred EecCCchHHHhhhcceeccc
Q 001304 768 GISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~ 787 (1104)
+| + .....+..||+++.+
T Consensus 183 ~~-~-~~~~~~~~a~~v~~~ 200 (211)
T 1l7m_A 183 AF-C-AKPILKEKADICIEK 200 (211)
T ss_dssp EE-S-CCHHHHTTCSEEECS
T ss_pred EE-C-CCHHHHhhcceeecc
Confidence 99 4 334566789999876
|
| >1xvi_A MPGP, YEDP, putative mannosyl-3-phosphoglycerate phosphatase; hypothetical protein, conserved protein, phophatase-like domain; HET: 1PE PG4 PGE; 2.26A {Escherichia coli K12} SCOP: c.108.1.10 | Back alignment and structure |
|---|
Probab=98.45 E-value=9.2e-07 Score=96.79 Aligned_cols=171 Identities=14% Similarity=0.196 Sum_probs=91.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC-C--CCCCeEEEecC--C------------cHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS-P--EPKGQLLSIDG--K------------TEDEVCRS 675 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~-~--~~~~~~~~~~~--~------------~~~~~~~~ 675 (1104)
.+.+.+.++|++|+++|++++++||+....+..+..++++.. + ..++..+..++ . +.+.+...
T Consensus 26 ~~~~~~~~~l~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~~~~~~~~~~~l~~~~~~~i 105 (275)
T 1xvi_A 26 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQGLPLIAENGAVIQLAEQWQEIDGFPRIISGISHGEISLV 105 (275)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCTTSCEEEGGGTEEECCTTCTTSTTTTEEECSSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCeEEEeCCCeEEecCcccccCceEEEecCCCHHHHHHH
Confidence 455779999999999999999999999999999999998743 1 11122332122 1 11222222
Q ss_pred HHHHHHHcc--c--c-C---------------------CCCCceEEEEcc--hhHHHHHHHHHHHHHhHhhhccceeeec
Q 001304 676 LERVLLTMR--I--T-T---------------------SEPKDVAFVVDG--WALEIALKHYRKAFTELAILSRTAICCR 727 (1104)
Q Consensus 676 ~~~~~~~~~--~--~-~---------------------~~~~~~~lvi~g--~~l~~~~~~~~~~f~~l~~~~~~~i~~r 727 (1104)
++...+... . . . .......++..+ +.++.+.+.+.+ + .+.... ...+.+
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~-~~~~~~-~~~~le 182 (275)
T 1xvi_A 106 LNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWRDSDERMAQFTARLNE-L-GLQFMQ-GARFWH 182 (275)
T ss_dssp HHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEECSCHHHHHHHHHHHHH-T-TEEEEE-CSSCEE
T ss_pred HHHHHHhhCcceeccCcCCHHHHHHhhCCchHHHHHHHhhccCceeEecCCHHHHHHHHHHHHh-h-CeEEEE-CCceEE
Confidence 221111100 0 0 0 001111233322 222222222221 1 111111 233567
Q ss_pred cChh--hHHHHHHHHHh-----cCCe--EEEEcCCccChhhhhhcCceEEecCCch---HHHhhh--cc-eeccc
Q 001304 728 VTPS--QKAQLVELLKS-----CDYR--TLAIGDGGNDVRMIQKADIGVGISGREG---LQAARA--AD-YSIGK 787 (1104)
Q Consensus 728 ~sP~--qK~~iV~~lk~-----~~~~--v~~iGDG~ND~~ml~~AdvGIam~g~~~---~~a~~~--AD-~vl~~ 787 (1104)
++|. +|+..++.+.+ ..+. ++++||+.||.+|++.|++||+| ++.. .+++.. || ++..+
T Consensus 183 I~~~~~~K~~~l~~l~~~~~~~~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~n~~~~~~~~~~~~~a~~~v~~~ 256 (275)
T 1xvi_A 183 VLDASAGKDQAANWIIATYQQLSGKRPTTLGLGDGPNDAPLLEVMDYAVIV-KGLNREGVHLHDEDPARVWRTQR 256 (275)
T ss_dssp EEETTCCHHHHHHHHHHHHHHHHSSCCEEEEEESSGGGHHHHHTSSEEEEC-CCCC-------------------
T ss_pred EecCCCCHHHHHHHHHHHhhhcccccCcEEEECCChhhHHHHHhCCceEEe-cCCCccchhhccccCCceeEccC
Confidence 7887 69887776653 2345 99999999999999999999999 6654 445443 78 77754
|
| >3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.43 E-value=4.1e-07 Score=95.27 Aligned_cols=124 Identities=16% Similarity=0.211 Sum_probs=86.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|+++|+++.++|+.....+..+...+|+...-.. ++..+.
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~~gl~~~f~~--~~~~~~------------------------- 126 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDLLHLDAAFSN--TLIVEN------------------------- 126 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEET-------------------------
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHcCcchhccc--eeEEeC-------------------------
Confidence 45899999999999999999999999999999999999887321100 110000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc-ChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCce
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
+ .....+...+ ..+.|..+++.+.+ ..+.++++||+.||++|++.|+++
T Consensus 127 -------~-------------------~~~~~~~~~~~~~k~k~~~~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~ 180 (217)
T 3m1y_A 127 -------D-------------------ALNGLVTGHMMFSHSKGEMLLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIK 180 (217)
T ss_dssp -------T-------------------EEEEEEEESCCSTTHHHHHHHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEE
T ss_pred -------C-------------------EEEeeeccCCCCCCChHHHHHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCe
Confidence 0 0000011111 23456666665543 346799999999999999999999
Q ss_pred EEecCCchHHHhhhcceecccchh
Q 001304 767 VGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 767 Iam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++| +...+.+..||+++.+.++
T Consensus 181 ~~~--~~~~~l~~~ad~v~~~~dl 202 (217)
T 3m1y_A 181 IAF--NAKEVLKQHATHCINEPDL 202 (217)
T ss_dssp EEE--SCCHHHHTTCSEEECSSBG
T ss_pred EEE--CccHHHHHhcceeecccCH
Confidence 999 4455677899999986544
|
| >4ap9_A Phosphoserine phosphatase; hydrolase, haloacid dehalogenase superfamily, NDSB; HET: 1PS; 1.78A {Thermococcus onnurineus} PDB: 4b6j_A | Back alignment and structure |
|---|
Probab=98.40 E-value=1e-07 Score=98.37 Aligned_cols=118 Identities=25% Similarity=0.344 Sum_probs=87.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|++++++||+....+..+ ..+|+... .. .+...
T Consensus 79 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~-~~~~~~~~-~~--~~~~~--------------------------- 127 (201)
T 4ap9_A 79 NVSPEARELVETLREKGFKVVLISGSFEEVLEPF-KELGDEFM-AN--RAIFE--------------------------- 127 (201)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEEETTTSGGG-TTTSSEEE-EE--EEEEE---------------------------
T ss_pred CCChhHHHHHHHHHHCCCeEEEEeCCcHHHHHHH-HHcCchhh-ee--eEEee---------------------------
Confidence 7899999999999999999999999988877777 77775211 00 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
++ ........|..|+..++.+ ..+.++++||+.||++|++.|++||+| ++
T Consensus 128 -----~~----------------------~~~~~~~~~~~k~~~l~~l--~~~~~i~iGD~~~Di~~~~~ag~~v~~-~~ 177 (201)
T 4ap9_A 128 -----DG----------------------KFQGIRLRFRDKGEFLKRF--RDGFILAMGDGYADAKMFERADMGIAV-GR 177 (201)
T ss_dssp -----TT----------------------EEEEEECCSSCHHHHHGGG--TTSCEEEEECTTCCHHHHHHCSEEEEE-SS
T ss_pred -----CC----------------------ceECCcCCccCHHHHHHhc--CcCcEEEEeCCHHHHHHHHhCCceEEE-CC
Confidence 00 0001345667898888888 567899999999999999999999999 55
Q ss_pred chHHHhhhcceecccchhhHHHH
Q 001304 773 EGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 773 ~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
... .||+++.+++.+..++
T Consensus 178 ~~~----~ad~v~~~~~el~~~l 196 (201)
T 4ap9_A 178 EIP----GADLLVKDLKELVDFI 196 (201)
T ss_dssp CCT----TCSEEESSHHHHHHHH
T ss_pred CCc----cccEEEccHHHHHHHH
Confidence 543 8999999877765543
|
| >3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A* | Back alignment and structure |
|---|
Probab=98.39 E-value=4.7e-07 Score=94.16 Aligned_cols=126 Identities=17% Similarity=0.143 Sum_probs=88.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-..
T Consensus 70 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 115 (205)
T 3m9l_A 70 RPAPGAVELVRELAGRGYRLGILTRNARELAHVTLEAIGLADCFAE---------------------------------- 115 (205)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGSCG----------------------------------
T ss_pred CCCccHHHHHHHHHhcCCeEEEEeCCchHHHHHHHHHcCchhhcCc----------------------------------
Confidence 5679999999999999999999999999988888888887321100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc-ChhhHHH----HHHHHHhcCCeEEEEcCCccChhhhhhcCc-e
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADI-G 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-sP~qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-G 766 (1104)
...+.++. ..+-|.. +.+.+.-..+.+++|||+.||+.|.+.|++ +
T Consensus 116 ----------------------------~~i~~~~~~~~kp~~~~~~~~~~~~g~~~~~~i~iGD~~~Di~~a~~aG~~~ 167 (205)
T 3m9l_A 116 ----------------------------ADVLGRDEAPPKPHPGGLLKLAEAWDVSPSRMVMVGDYRFDLDCGRAAGTRT 167 (205)
T ss_dssp ----------------------------GGEECTTTSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred ----------------------------ceEEeCCCCCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCCEE
Confidence 00111111 0111222 233332234679999999999999999999 9
Q ss_pred EEecCCchHHHhhhcceecccchhhHHHHHhhhhh
Q 001304 767 VGISGREGLQAARAADYSIGKFRFLKRLILVHGRY 801 (1104)
Q Consensus 767 Iam~g~~~~~a~~~AD~vl~~f~~l~~lll~~GR~ 801 (1104)
|+| ++.....+..||+++.+++.|..++=.+++.
T Consensus 168 i~v-~~~~~~~~~~ad~v~~~~~el~~~~~~~~~~ 201 (205)
T 3m9l_A 168 VLV-NLPDNPWPELTDWHARDCAQLRDLLSAEGHH 201 (205)
T ss_dssp EEC-SSSSCSCGGGCSEECSSHHHHHHHHHHTTCC
T ss_pred EEE-eCCCCcccccCCEEeCCHHHHHHHHHhcccc
Confidence 999 6655556678999999988877665334443
|
| >1y8a_A Hypothetical protein AF1437; structural genomics, protein structu initiative, PSI, midwest center for structural genomics; 1.40A {Archaeoglobus fulgidus} SCOP: c.108.1.24 | Back alignment and structure |
|---|
Probab=98.39 E-value=7e-07 Score=100.65 Aligned_cols=163 Identities=11% Similarity=0.127 Sum_probs=95.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCc------HHHHHHHHHHHHHHcccc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKT------EDEVCRSLERVLLTMRIT 686 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 686 (1104)
.+++++.++++.|++ |+.+.++||+....+..++...++... +.. +... .++....+... .
T Consensus 103 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~k~~~~~-~----- 169 (332)
T 1y8a_A 103 KFVPDAEKAMATLQE-RWTPVVISTSYTQYLRRTASMIGVRGE-----LHG-TEVDFDSIAVPEGLREELLSI-I----- 169 (332)
T ss_dssp CBCTTHHHHHHHHHT-TCEEEEEEEEEHHHHHHHHHHTTCCSE-----EEE-EBCCGGGCCCCHHHHHHHHHH-H-----
T ss_pred CCHHHHHHHHHHHHc-CCcEEEEECCceEEEcccchhhhhhhh-----hcc-cccchhhhccccccceeEEec-C-----
Confidence 468999999999999 999999999987666677777776311 111 1000 01111000000 0
Q ss_pred CCCCCceEEEEcchhHHHHH-HHHHHHHHhHhhhccc-eeeec--cC--hhhHHHHHHHHHhcC--CeEEEEcCCccChh
Q 001304 687 TSEPKDVAFVVDGWALEIAL-KHYRKAFTELAILSRT-AICCR--VT--PSQKAQLVELLKSCD--YRTLAIGDGGNDVR 758 (1104)
Q Consensus 687 ~~~~~~~~lvi~g~~l~~~~-~~~~~~f~~l~~~~~~-~i~~r--~s--P~qK~~iV~~lk~~~--~~v~~iGDG~ND~~ 758 (1104)
...+.... +.+ +.+.++ ..... ..+.+ .. +.+|+..++.+.... +.|+++|||.||++
T Consensus 170 ------------~~~~~~~~~~~l-~~~~~~-~~~s~~~~~~e~ii~~~g~~K~~al~gi~~~~~~~~via~GDs~NDi~ 235 (332)
T 1y8a_A 170 ------------DVIASLSGEELF-RKLDEL-FSRSEVRKIVESVKAVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYK 235 (332)
T ss_dssp ------------HHHHHCCHHHHH-HHHHHH-HHSHHHHHHHHTCBCCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHH
T ss_pred ------------HHHHhhhhHHHH-HHHHHH-HhhcCCCceeeEEecCCCCCHHHHHhccChhhcCceEEEEeCcHhHHH
Confidence 00000000 011 111111 11110 11221 23 458999888665432 45999999999999
Q ss_pred hhhhc----CceEEecCCchHHHhhhcceecccchh------hHHHHHhhhhhhhhhh
Q 001304 759 MIQKA----DIGVGISGREGLQAARAADYSIGKFRF------LKRLILVHGRYSYNRT 806 (1104)
Q Consensus 759 ml~~A----dvGIam~g~~~~~a~~~AD~vl~~f~~------l~~lll~~GR~~~~~i 806 (1104)
|++.| ++||+| ++...++..||+++.+.+. +..+ +..||..+ ++
T Consensus 236 ml~~A~~~~g~~vam--na~~~lk~~Ad~v~~~~~~dGV~~~l~~~-~~~~~~~~-~~ 289 (332)
T 1y8a_A 236 MFEAARGLGGVAIAF--NGNEYALKHADVVIISPTAMSEAKVIELF-MERKERAF-EV 289 (332)
T ss_dssp HHHHHHHTTCEEEEE--SCCHHHHTTCSEEEECSSTHHHHHHHHHH-HHHGGGGG-GG
T ss_pred HHHHHhhcCCeEEEe--cCCHHHHhhCcEEecCCCCCHHHHHHHHH-HHcCCchh-HH
Confidence 99999 999999 5566788899999875322 3333 47888877 54
|
| >2rbk_A Putative uncharacterized protein; HAD-like phosphatase, unknown function; 1.00A {Bacteroides thetaiotaomicron} SCOP: c.108.1.10 PDB: 1ymq_A 2rb5_A 2rav_A 2rar_A | Back alignment and structure |
|---|
Probab=98.37 E-value=6.5e-07 Score=97.16 Aligned_cols=63 Identities=32% Similarity=0.470 Sum_probs=51.0
Q ss_pred ccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchh
Q 001304 727 RVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 727 r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++.|. .|+..++.+.+ ..+.++++||+.||++|++.|++|++| ++....++..||+++.+.+.
T Consensus 180 ei~~~~~~K~~~~~~~~~~~~~~~~~~~~iGD~~nD~~~~~~ag~~v~~-~n~~~~~~~~a~~v~~~~~~ 248 (261)
T 2rbk_A 180 DVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPIDE 248 (261)
T ss_dssp EEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCGGG
T ss_pred EecCCCCChHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHcCceEEe-cCccHHHHhhCCEEeccCch
Confidence 44554 68887777654 236799999999999999999999999 77777788899999986554
|
| >3zx4_A MPGP, mannosyl-3-phosphoglycerate phosphatase; hydrolase, haloalkanoid acid dehalogenase-like phosphatase, crystallographic snapshot; HET: 2M8; 1.74A {Thermus thermophilus} PDB: 3zty_A 3zu6_A* 3ztw_A* 3zw7_A* 3zwd_A* 3zwk_A 3zup_A* 3zx5_A* | Back alignment and structure |
|---|
Probab=98.37 E-value=1.7e-06 Score=93.74 Aligned_cols=164 Identities=16% Similarity=0.142 Sum_probs=93.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEE-------------------ecCCcHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLS-------------------IDGKTEDE 671 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~-------------------~~~~~~~~ 671 (1104)
.+.+.+.++|++++++|++++++||+....+. .+|+..+ ..++..+. ......+.
T Consensus 16 ~i~~~~~~al~~l~~~Gi~v~iaTGR~~~~~~----~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (259)
T 3zx4_A 16 GELGPAREALERLRALGVPVVPVTAKTRKEVE----ALGLEPPFIVENGGGLYLPRDWPVRAGRPKGGYRVVSLAWPYRK 91 (259)
T ss_dssp SSCSTTHHHHHHHHHTTCCEEEBCSSCHHHHH----HTTCCSSEEEGGGTEEEEETTCSSCCSEEETTEEEEECSCCHHH
T ss_pred cCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHH----HcCCCCcEEEECCcEEEeCCCCcccccccCCceEEEEcCCCHHH
Confidence 57789999999999999999999999998876 6665321 00111121 11222333
Q ss_pred HHHHHHHHHHHccc-----c---------------------CCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceee
Q 001304 672 VCRSLERVLLTMRI-----T---------------------TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAIC 725 (1104)
Q Consensus 672 ~~~~~~~~~~~~~~-----~---------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~ 725 (1104)
+...++...+.... . ........+++....++.+.+.+.+. .+....... +
T Consensus 92 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~s~~-~ 168 (259)
T 3zx4_A 92 VRARLREAEALAGRPILGYGDLTAEAVARLTGLSREAARRAKAREYDETLVLCPEEVEAVLEALEAV--GLEWTHGGR-F 168 (259)
T ss_dssp HHHHHHHHHHHHTSCCCBGGGBCHHHHHHHHCCCHHHHHHHTCCSSCEEBCCCTTTHHHHHHHHHHT--TCEEEECSS-S
T ss_pred HHHHHHHHHHhcCceEEEcCCCCHHHHHHHcCCCHHHhhhhhccccceeEEeCcHHHHHHHHHHHHC--CcEEEecCc-e
Confidence 33333322211100 0 00011111111111233332222221 121111121 2
Q ss_pred eccCh-hhHHHHHHHHHhc-C-----CeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 726 CRVTP-SQKAQLVELLKSC-D-----YRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 726 ~r~sP-~qK~~iV~~lk~~-~-----~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.++.| .+|+..++.+.+. | +.++++||+.||.+|++.|++||+| +|+.. + .|+++..+
T Consensus 169 ~ei~~~~~K~~~l~~l~~~~~i~~~~~~~~~~GD~~nD~~m~~~ag~~va~-~na~~-~--~~~~~~~~ 233 (259)
T 3zx4_A 169 YHAAKGADKGRAVARLRALWPDPEEARFAVGLGDSLNDLPLFRAVDLAVYV-GRGDP-P--EGVLATPA 233 (259)
T ss_dssp EEEESSCCHHHHHHHHHHTCSSHHHHTSEEEEESSGGGHHHHHTSSEEEEC-SSSCC-C--TTCEECSS
T ss_pred EEEcCCCCHHHHHHHHHHHhCCCCCCceEEEEeCCHHHHHHHHhCCCeEEe-CChhh-c--CCcEEeCC
Confidence 34444 4899988887652 3 7799999999999999999999999 77665 3 67888764
|
| >3kd3_A Phosphoserine phosphohydrolase-like protein; csgid, niaid, S genomics, national institute of allergy and infectious DISE (niaid); 1.70A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=98.36 E-value=7.5e-07 Score=93.04 Aligned_cols=131 Identities=19% Similarity=0.234 Sum_probs=87.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.++++.|+++|+++.++||.....+..+.+..|+.... ++..
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~----~~~~----------------------------- 129 (219)
T 3kd3_A 83 LTDGIKELVQDLKNKGFEIWIFSGGLSESIQPFADYLNIPREN----IFAV----------------------------- 129 (219)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCCGGG----EEEE-----------------------------
T ss_pred CChhHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHcCCCccc----EEEe-----------------------------
Confidence 7899999999999999999999999999999999999873211 1100
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-HhcCCeEEEEcCCccChhhhhh----cCceEE
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSCDYRTLAIGDGGNDVRMIQK----ADIGVG 768 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~~~~~v~~iGDG~ND~~ml~~----AdvGIa 768 (1104)
.++.+... ..........+|..|...+... .-..+.++++||+.||++|++. +.+|++
T Consensus 130 ~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~vGD~~~Di~~~~~G~~~~~v~~~ 192 (219)
T 3kd3_A 130 ETIWNSDG-----------------SFKELDNSNGACDSKLSAFDKAKGLIDGEVIAIGDGYTDYQLYEKGYATKFIAYM 192 (219)
T ss_dssp EEEECTTS-----------------BEEEEECTTSTTTCHHHHHHHHGGGCCSEEEEEESSHHHHHHHHHTSCSEEEEEC
T ss_pred eeeecCCC-----------------ceeccCCCCCCcccHHHHHHHHhCCCCCCEEEEECCHhHHHHHhCCCCcEEEecc
Confidence 00000000 0000122234555666655544 3356789999999999999975 344445
Q ss_pred ecCCchHHHhhhcceecccchhhHHHH
Q 001304 769 ISGREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 769 m~g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+ ++.....+..||+++.+++.+..++
T Consensus 193 ~-~~~~~~~~~~ad~v~~~~~el~~~l 218 (219)
T 3kd3_A 193 E-HIEREKVINLSKYVARNVAELASLI 218 (219)
T ss_dssp S-SCCCHHHHHHCSEEESSHHHHHHHH
T ss_pred C-ccccHHHHhhcceeeCCHHHHHHhh
Confidence 4 4555556678999999887776654
|
| >3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=98.32 E-value=1.6e-06 Score=100.89 Aligned_cols=123 Identities=22% Similarity=0.306 Sum_probs=87.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|+++|+++.++||.....+..+++.+|+...-.. .+...+|.
T Consensus 256 ~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~lgl~~~~~~-~l~~~dg~------------------------- 309 (415)
T 3p96_A 256 ELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEELMLDYVAAN-ELEIVDGT------------------------- 309 (415)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCSEEEEE-CEEEETTE-------------------------
T ss_pred ccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHHcCccceeee-eEEEeCCE-------------------------
Confidence 7899999999999999999999999999999999999998321000 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee-ccChhhHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~-r~sP~qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
++ ..+.. -..++.|..+++.+.+ . .+.++++|||.||++|++.|++|+
T Consensus 310 ----~t-----------------------g~~~~~v~~~kpk~~~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~v 362 (415)
T 3p96_A 310 ----LT-----------------------GRVVGPIIDRAGKATALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGI 362 (415)
T ss_dssp ----EE-----------------------EEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred ----EE-----------------------eeEccCCCCCcchHHHHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeE
Confidence 00 00111 1235667777766554 2 367999999999999999999999
Q ss_pred EecCCchHHHhhhcceecccchh
Q 001304 768 GISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++ +....++..||+++...+.
T Consensus 363 a~--~~~~~~~~~ad~~i~~~~l 383 (415)
T 3p96_A 363 AF--NAKPALREVADASLSHPYL 383 (415)
T ss_dssp EE--SCCHHHHHHCSEEECSSCT
T ss_pred EE--CCCHHHHHhCCEEEccCCH
Confidence 99 3445577799999875443
|
| >4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A | Back alignment and structure |
|---|
Probab=98.32 E-value=1.1e-06 Score=93.49 Aligned_cols=120 Identities=23% Similarity=0.187 Sum_probs=85.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 103 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 148 (237)
T 4ex6_A 103 RLLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAELTGLDTRLT---------------------------------- 148 (237)
T ss_dssp GGBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTGGGTCS----------------------------------
T ss_pred CccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHHcCchhhee----------------------------------
Confidence 3578999999999999999999999999988888888888632211
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhH----HHHHHHHHhcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQK----AQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK----~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..++++..+ +.| ..+.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 149 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 198 (237)
T 4ex6_A 149 ------------------------------VIAGDDSVERGKPHPDMALHVARGLGIPPERCVVIGDGVPDAEMGRAAGM 198 (237)
T ss_dssp ------------------------------EEECTTTSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTC
T ss_pred ------------------------------eEEeCCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCC
Confidence 111111111 112 23344443345789999999999999999999
Q ss_pred ---eEEecCCchHHHhh-hcceecccchhhHHHH
Q 001304 766 ---GVGISGREGLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 ---GIam~g~~~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+|++..+...+.+. .||+++.++..+..++
T Consensus 199 ~~i~v~~g~~~~~~~~~~~ad~v~~~~~el~~~l 232 (237)
T 4ex6_A 199 TVIGVSYGVSGPDELMRAGADTVVDSFPAAVTAV 232 (237)
T ss_dssp EEEEESSSSSCHHHHHHTTCSEEESSHHHHHHHH
T ss_pred eEEEEecCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 88883244345555 7999999888776653
|
| >2fue_A PMM 1, PMMH-22, phosphomannomutase 1; enzyme-product complex, protein glycosyl carbohydrate-deficient glycoprotein syndrome; HET: MSE M1P; 1.75A {Homo sapiens} SCOP: c.108.1.10 PDB: 2fuc_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=1.6e-06 Score=94.14 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=52.1
Q ss_pred eeccChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcC-ceEEecCCchHHHhhhcceeccc
Q 001304 725 CCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 725 ~~r~sP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
+.+++|. +|+..++.+.. ..+.|+++|| |.||.+||+.|+ +|++| +|+...+++.||++...
T Consensus 188 ~leI~~~~vsKg~al~~l~gi~~~~viafGDs~~~~~NDi~Ml~~~~~~g~av-~NA~~~~k~~a~~v~~~ 257 (262)
T 2fue_A 188 SFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFPE 257 (262)
T ss_dssp CEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCTT
T ss_pred EEEEecCCCCHHHHHHHHHCCCHHHEEEECCCCCCCCCCHHHHhcCccCcEEe-cCCCHHHHHhhheeCCC
Confidence 4677776 69999999811 2468999999 999999999999 59999 99988899899998764
|
| >3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=98.24 E-value=1.7e-06 Score=91.00 Aligned_cols=119 Identities=18% Similarity=0.235 Sum_probs=86.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 85 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 130 (226)
T 3mc1_A 85 NKVYDGIEALLSSLKDYGFHLVVATSKPTVFSKQILEHFKLAFYFD---------------------------------- 130 (226)
T ss_dssp CCBCTTHHHHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCHhhee----------------------------------
Confidence 3578999999999999999999999999888888888888732111
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHH----hcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk----~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..++++..+ +.|..+++.+. -..+.+++|||+.||+.|.+.|++
T Consensus 131 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~aG~ 180 (226)
T 3mc1_A 131 ------------------------------AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDREYDVIGALKNNL 180 (226)
T ss_dssp ------------------------------EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHTTTC
T ss_pred ------------------------------eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCCHHHHHHHHHCCC
Confidence 111222222 23444444333 234689999999999999999999
Q ss_pred ---eEEecCCchHHH--hhhcceecccchhhHHHH
Q 001304 766 ---GVGISGREGLQA--ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 ---GIam~g~~~~~a--~~~AD~vl~~f~~l~~ll 795 (1104)
+|++ |+...+. +..||+++.++..+..++
T Consensus 181 ~~i~v~~-g~~~~~~~~~~~ad~v~~s~~el~~~~ 214 (226)
T 3mc1_A 181 PSIGVTY-GFGSYEELKNAGANYIVNSVDELHKKI 214 (226)
T ss_dssp CEEEESS-SSSCHHHHHHHTCSEEESSHHHHHHHH
T ss_pred CEEEEcc-CCCCHHHHHHcCCCEEECCHHHHHHHH
Confidence 7776 5543333 358999999988887765
|
| >1te2_A Putative phosphatase; structural genomics, phosphates, PSI, protein S initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.76A {Escherichia coli} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.23 E-value=3.5e-06 Score=88.36 Aligned_cols=118 Identities=11% Similarity=0.051 Sum_probs=81.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.+++.|++++++|+.....+..+....|+...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~----------------------------------- 138 (226)
T 1te2_A 94 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFD----------------------------------- 138 (226)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHHhcCcHhhCc-----------------------------------
Confidence 457899999999999999999999999888777777777632111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccC------hhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT------PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~s------P~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
..+++... |.--..+.+.+.-..+.+++|||+.||++|++.|+++
T Consensus 139 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~i~~~~~i~iGD~~nDi~~a~~aG~~ 189 (226)
T 1te2_A 139 -----------------------------ALASAEKLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMR 189 (226)
T ss_dssp -----------------------------EEEECTTSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred -----------------------------EEEeccccCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHcCCE
Confidence 11111111 1112233344433456799999999999999999999
Q ss_pred EEecCC---chHHHhhhcceecccchhhHHH
Q 001304 767 VGISGR---EGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 767 Iam~g~---~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+++-.. .....+..||+++.+++.+..-
T Consensus 190 ~~~~~~~~~~~~~~~~~a~~v~~~~~el~~~ 220 (226)
T 1te2_A 190 SIVVPAPEAQNDPRFVLANVKLSSLTELTAK 220 (226)
T ss_dssp EEECCCTTTTTCGGGGGSSEECSCGGGCCHH
T ss_pred EEEEcCCCCcccccccccCeEECCHHHHhHH
Confidence 988322 2223456899999887766443
|
| >3f9r_A Phosphomannomutase; trypanosome glycobiology structural genomics, isomerase, structural genomics consortium, SGC; 1.85A {Trypanosoma brucei} SCOP: c.108.1.0 PDB: 2i54_A* 2i55_A* | Back alignment and structure |
|---|
Probab=98.21 E-value=1.1e-06 Score=94.28 Aligned_cols=61 Identities=21% Similarity=0.238 Sum_probs=47.9
Q ss_pred cceeeeccChh--hHHHHHHHHHhcCCeEEEEcC----CccChhhhhhcC-ceEEecCCchHHHhhhcc
Q 001304 721 RTAICCRVTPS--QKAQLVELLKSCDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAAD 782 (1104)
Q Consensus 721 ~~~i~~r~sP~--qK~~iV~~lk~~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~AD 782 (1104)
+...+.+++|. +|+..++.|.+..+.|+++|| |.||.+||+.|+ +|++| ++....++..++
T Consensus 174 sg~~~leI~~~gv~Kg~al~~L~~~~~ev~afGD~~~~g~NDi~Ml~~a~~~g~~v-~n~~~~~~~~~~ 241 (246)
T 3f9r_A 174 GGQISFDVFPVGWDKTYCLQFVEDDFEEIHFFGDKTQEGGNDYEIYTDKRTIGHKV-TSYKDTIAEVEK 241 (246)
T ss_dssp ETTTEEEEEETTCSGGGGGGGTTTTCSEEEEEESCCSTTSTTHHHHTCTTSEEEEC-SSHHHHHHHHHH
T ss_pred cCCeEEEEEeCCCCHHHHHHHHHcCcccEEEEeCCCCCCCCCHHHHhCCCccEEEe-CCHHHHHHHHHH
Confidence 34456788887 799999988776678999999 799999999996 89999 776555544443
|
| >4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.19 E-value=4.1e-06 Score=93.33 Aligned_cols=119 Identities=16% Similarity=0.221 Sum_probs=82.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++||.....+..+++.+|+...-.. .+..++
T Consensus 179 ~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~lgl~~~f~~--~l~~~d-------------------------- 230 (317)
T 4eze_A 179 TLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKARYQLDYAFSN--TVEIRD-------------------------- 230 (317)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--CEEEET--------------------------
T ss_pred EECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHHcCCCeEEEE--EEEeeC--------------------------
Confidence 4899999999999999999999999999999999999998321000 000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee-ccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC-RVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~-r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
| .....+.. -..++.|..+++.+.+ ..+.+++|||+.||++|.+.|++|+
T Consensus 231 ------g-------------------~~tg~i~~~~~~~kpkp~~~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~v 285 (317)
T 4eze_A 231 ------N-------------------VLTDNITLPIMNAANKKQTLVDLAARLNIATENIIACGDGANDLPMLEHAGTGI 285 (317)
T ss_dssp ------T-------------------EEEEEECSSCCCHHHHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEE
T ss_pred ------C-------------------eeeeeEecccCCCCCCHHHHHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeE
Confidence 0 00000111 1134556666555433 3467999999999999999999999
Q ss_pred EecCCchHHHhhhcceecc
Q 001304 768 GISGREGLQAARAADYSIG 786 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~ 786 (1104)
++ + .....+..||.++.
T Consensus 286 a~-~-~~~~~~~~a~~~i~ 302 (317)
T 4eze_A 286 AW-K-AKPVVREKIHHQIN 302 (317)
T ss_dssp EE-S-CCHHHHHHCCEEES
T ss_pred Ee-C-CCHHHHHhcCeeeC
Confidence 99 3 34446668888775
|
| >2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.19 E-value=2.6e-06 Score=85.00 Aligned_cols=105 Identities=18% Similarity=0.143 Sum_probs=77.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.++++.|+++|+++.++||+....+..+.+.+|+.. .+++
T Consensus 37 ~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~--------~~~~--------------------------- 81 (162)
T 2p9j_A 37 FNVLDGIGIKLLQKMGITLAVISGRDSAPLITRLKELGVEE--------IYTG--------------------------- 81 (162)
T ss_dssp EEHHHHHHHHHHHTTTCEEEEEESCCCHHHHHHHHHTTCCE--------EEEC---------------------------
T ss_pred ecccHHHHHHHHHHCCCEEEEEeCCCcHHHHHHHHHcCCHh--------hccC---------------------------
Confidence 34567899999999999999999999999999999998721 1110
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHH----HHHHhcCCeEEEEcCCccChhhhhhcCceEEe
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLV----ELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV----~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
++.|...+ +.+.-..+.++++||+.||++|.+.|++++++
T Consensus 82 ------------------------------------~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~ag~~~~~ 125 (162)
T 2p9j_A 82 ------------------------------------SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDIEVMKKVGFPVAV 125 (162)
T ss_dssp ------------------------------------C--CHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHHSSEEEEC
T ss_pred ------------------------------------CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHHHHCCCeEEe
Confidence 11222222 22222346799999999999999999999988
Q ss_pred cCCchHHHhhhcceecccchh
Q 001304 770 SGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
++.....+..||+++.+.+.
T Consensus 126 -~~~~~~~~~~a~~v~~~~~~ 145 (162)
T 2p9j_A 126 -RNAVEEVRKVAVYITQRNGG 145 (162)
T ss_dssp -TTSCHHHHHHCSEECSSCSS
T ss_pred -cCccHHHHhhCCEEecCCCC
Confidence 45455566789999986543
|
| >3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=98.17 E-value=4.5e-06 Score=88.33 Aligned_cols=112 Identities=16% Similarity=0.120 Sum_probs=74.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+... +..+...+|+...-.
T Consensus 92 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~--~~~~l~~~gl~~~f~----------------------------------- 134 (233)
T 3nas_A 92 DLLPGIGRLLCQLKNENIKIGLASSSRN--APKILRRLAIIDDFH----------------------------------- 134 (233)
T ss_dssp GSCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCTTTCS-----------------------------------
T ss_pred CcCcCHHHHHHHHHHCCCcEEEEcCchh--HHHHHHHcCcHhhcC-----------------------------------
Confidence 4789999999999999999999999754 667777888743211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH------HHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK------~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
..++++..+..| ..+.+.+.-..+.+++|||+.||+.|.+.|+++
T Consensus 135 -----------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~vGDs~~Di~~a~~aG~~ 185 (233)
T 3nas_A 135 -----------------------------AIVDPTTLAKGKPDPDIFLTAAAMLDVSPADCAAIEDAEAGISAIKSAGMF 185 (233)
T ss_dssp -----------------------------EECCC---------CCHHHHHHHHHTSCGGGEEEEECSHHHHHHHHHTTCE
T ss_pred -----------------------------EEeeHhhCCCCCCChHHHHHHHHHcCCCHHHEEEEeCCHHHHHHHHHcCCE
Confidence 011111111112 233444443457899999999999999999999
Q ss_pred EEecCCchHHHhhhcceecccchhhH
Q 001304 767 VGISGREGLQAARAADYSIGKFRFLK 792 (1104)
Q Consensus 767 Iam~g~~~~~a~~~AD~vl~~f~~l~ 792 (1104)
++| .+...+.+ .||+++.++..+.
T Consensus 186 ~~~-~~~~~~~~-~ad~v~~s~~el~ 209 (233)
T 3nas_A 186 AVG-VGQGQPML-GADLVVRQTSDLT 209 (233)
T ss_dssp EEE-CC--------CSEECSSGGGCC
T ss_pred EEE-ECCccccc-cCCEEeCChHhCC
Confidence 999 55554444 8999998877664
|
| >2amy_A PMM 2, phosphomannomutase 2; HS.459855, HS.313504, BC008310, phosphatase, PFAM PF03332, H superfamily, jaecken disease; 2.09A {Homo sapiens} SCOP: c.108.1.10 PDB: 2q4r_A | Back alignment and structure |
|---|
Probab=98.16 E-value=2.6e-06 Score=91.50 Aligned_cols=59 Identities=17% Similarity=0.175 Sum_probs=47.9
Q ss_pred eeccChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcCc-eEEecCCchHHHhhhccee
Q 001304 725 CCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKADI-GVGISGREGLQAARAADYS 784 (1104)
Q Consensus 725 ~~r~sP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Adv-GIam~g~~~~~a~~~AD~v 784 (1104)
+.+++|. +|+..++.+.. ..+.|+++|| |.||.+||+.|+. |++| ||+..++++.||+|
T Consensus 179 ~leI~~~~~~Kg~al~~l~~i~~~~viafGD~~~~~~ND~~Ml~~a~~ag~av-~Na~~~vk~~A~~v 245 (246)
T 2amy_A 179 SFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV-TAPEDTRRICELLF 245 (246)
T ss_dssp EEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC-SSHHHHHHHHHHHC
T ss_pred EEEEecCCCchHHHHHHHhCCCHHHEEEECCCCCCCCCcHHHHHhCCcceEEe-eCCCHHHHHHHhhc
Confidence 4577776 69988888811 2468999999 9999999999988 9999 99988899999987
|
| >1svj_A Potassium-transporting ATPase B chain; alpha-beta sandwich, hydrolase; NMR {Escherichia coli} SCOP: d.220.1.1 PDB: 1u7q_A 2a00_A* 2a29_A* | Back alignment and structure |
|---|
Probab=98.10 E-value=1.9e-05 Score=77.36 Aligned_cols=141 Identities=16% Similarity=0.210 Sum_probs=88.6
Q ss_pred CCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCceeeecCCccHHH
Q 001304 382 KTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEA 461 (1104)
Q Consensus 382 KTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~A 461 (1104)
..||+|-|++++..+...+. . +..+++...+.+. ..+++|...|
T Consensus 13 ~~~tit~gnr~vt~v~~~~g---------~--------------~e~elL~lAAs~E-------------~~SeHPla~A 56 (156)
T 1svj_A 13 SSGHGGRHNRQASEFIPAQG---------V--------------DEKTLADAAQLAS-------------LADETPEGRS 56 (156)
T ss_dssp --------CEEEEEEEECTT---------S--------------CHHHHHHHHHHTT-------------SSCCSHHHHH
T ss_pred CCCceecCCCeEEEEEecCC---------C--------------CHHHHHHHHHHHh-------------CcCCCHHHHH
Confidence 46999999999998754210 0 1123333333322 1257999999
Q ss_pred HHHHHHhc-CcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhhhccC--C
Q 001304 462 LVHAAAQL-HMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHAG--Q 538 (1104)
Q Consensus 462 l~~~a~~~-g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~~~~~--~ 538 (1104)
++++|++. |........ . .....+|++..++..|.+ +| .-+.+|+++.|...+... .
T Consensus 57 Iv~~A~~~~~l~~~~~~~-----------~---~~~~~~F~a~~G~~Gv~v----~G--~~v~vGn~~~i~~l~~~~gi~ 116 (156)
T 1svj_A 57 IVILAKQRFNLRERDVQS-----------L---HATFVPFTAQSRMSGINI----DN--RMIRKGSVDAIRRHVEANGGH 116 (156)
T ss_dssp HHHHHHHHTTCCCCCHHH-----------H---TCEEEEEETTTTEEEEEE----TT--EEEEEEEHHHHHHHHHHHTCC
T ss_pred HHHHHHHhcCCCcccccc-----------c---ccceeeccccCCCCeEEE----CC--EEEEEeCcHHHHHHHHHcCCC
Confidence 99999876 653210000 0 012458888887777744 34 347899998777766432 2
Q ss_pred chhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccCCC
Q 001304 539 QTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRLQD 616 (1104)
Q Consensus 539 ~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~lr~ 616 (1104)
.+..+.+.+++++.+|.+++++| .|..++|++++.|++|+
T Consensus 117 ~~~~~~~~~~~la~~G~T~v~VA--------------------------------------~d~~l~GvIalaD~iK~ 156 (156)
T 1svj_A 117 FPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALKDIVKG 156 (156)
T ss_dssp CCHHHHHHHHHHHHTTCEEEEEE--------------------------------------ETTEEEEEEEEEECCCC
T ss_pred CcHHHHHHHHHHHhCCCCEEEEE--------------------------------------ECCEEEEEEEEecCCCC
Confidence 23468888999999999999999 47789999999999986
|
| >3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343} | Back alignment and structure |
|---|
Probab=98.08 E-value=5.7e-06 Score=86.64 Aligned_cols=118 Identities=16% Similarity=0.095 Sum_probs=78.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.+.++.+++.|+++.++|+.....+.......|+...-.
T Consensus 90 ~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~~~~~~~~~~~~------------------------------------ 133 (225)
T 3d6j_A 90 LFPDTLPTLTHLKKQGIRIGIISTKYRFRILSFLRNHMPDDWFD------------------------------------ 133 (225)
T ss_dssp ECTTHHHHHHHHHHHTCEEEEECSSCHHHHHHHHHTSSCTTCCS------------------------------------
T ss_pred cCcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHcCchhhee------------------------------------
Confidence 46899999999999999999999999888888888877642211
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHH----HHHHHHhcCCeEEEEcCCccChhhhhhcCceE
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
..++++..+. .|.. +.+.+.-..+.++++||+.||++|++.|++++
T Consensus 134 ----------------------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~i~iGD~~nDi~~~~~aG~~~ 185 (225)
T 3d6j_A 134 ----------------------------IIIGGEDVTHHKPDPEGLLLAIDRLKACPEEVLYIGDSTVDAGTAAAAGVSF 185 (225)
T ss_dssp ----------------------------EEECGGGCSSCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEE
T ss_pred ----------------------------eeeehhhcCCCCCChHHHHHHHHHhCCChHHeEEEcCCHHHHHHHHHCCCeE
Confidence 0011111111 1122 22333223467999999999999999999998
Q ss_pred EecCC---chHHHhhh-cceecccchhhHHHH
Q 001304 768 GISGR---EGLQAARA-ADYSIGKFRFLKRLI 795 (1104)
Q Consensus 768 am~g~---~~~~a~~~-AD~vl~~f~~l~~ll 795 (1104)
++-++ ...+.+.. ||+++.+.+.+..++
T Consensus 186 ~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 217 (225)
T 3d6j_A 186 TGVTSGMTTAQEFQAYPYDRIISTLGQLISVP 217 (225)
T ss_dssp EEETTSSCCTTGGGGSCCSEEESSGGGGC---
T ss_pred EEECCCCCChHHHhhcCCCEEECCHHHHHHhh
Confidence 76222 22334444 899998877765543
|
| >1swv_A Phosphonoacetaldehyde hydrolase; HAD enzyme superfamily, phosphonotase, metal binding; 2.30A {Bacillus cereus} SCOP: c.108.1.3 PDB: 1sww_A 2iof_A* 2ioh_A 1rql_A 1rqn_A 2iof_K* 1rdf_A 1fez_A | Back alignment and structure |
|---|
Probab=98.07 E-value=7e-06 Score=88.94 Aligned_cols=119 Identities=20% Similarity=0.231 Sum_probs=79.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.+.++.|++.|+++.++|++....+..+...+|+...-..
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~~~~~~~~---------------------------------- 148 (267)
T 1swv_A 103 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQGYKPD---------------------------------- 148 (267)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHTTCCCS----------------------------------
T ss_pred ccCccHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHcCCcccChH----------------------------------
Confidence 4679999999999999999999999988777777666654221000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcC-CeEEEEcCCccChhhhhhcC-
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCD-YRTLAIGDGGNDVRMIQKAD- 764 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~-~~v~~iGDG~ND~~ml~~Ad- 764 (1104)
..++++. .|.--..+++.+.-.. +.+++|||+.||+.|++.|+
T Consensus 149 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~iGD~~nDi~~a~~aG~ 199 (267)
T 1swv_A 149 -----------------------------FLVTPDDVPAGRPYPWMCYKNAMELGVYPMNHMIKVGDTVSDMKEGRNAGM 199 (267)
T ss_dssp -----------------------------CCBCGGGSSCCTTSSHHHHHHHHHHTCCSGGGEEEEESSHHHHHHHHHTTS
T ss_pred -----------------------------heecCCccCCCCCCHHHHHHHHHHhCCCCCcCEEEEeCCHHHHHHHHHCCC
Confidence 0111111 1111223344443344 68999999999999999999
Q ss_pred --ceEEecCCc------------------------hHHHhh-hcceecccchhhHHHH
Q 001304 765 --IGVGISGRE------------------------GLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 765 --vGIam~g~~------------------------~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
++|++ |+. ..+.+. .||+++.++..+..++
T Consensus 200 ~~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~~~~el~~~l 256 (267)
T 1swv_A 200 WTVGVIL-GSSELGLTEEEVENMDSVELREKIEVVRNRFVENGAHFTIETMQELESVM 256 (267)
T ss_dssp EEEEECT-TCTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHTTCSEEESSGGGHHHHH
T ss_pred EEEEEcC-CCCccCccHHHHhhchhhhhhhhhhhHHHHHHhcCCceeccCHHHHHHHH
Confidence 55555 443 233444 4999999888776654
|
| >2go7_A Hydrolase, haloacid dehalogenase-like family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.10A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=98.07 E-value=4.9e-06 Score=85.71 Aligned_cols=118 Identities=18% Similarity=0.187 Sum_probs=77.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.+.++.+++.|++++++|+....... .....|+...-.
T Consensus 85 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~-~~~~~~~~~~f~----------------------------------- 128 (207)
T 2go7_A 85 VLMPGAREVLAWADESGIQQFIYTHKGNNAFT-ILKDLGVESYFT----------------------------------- 128 (207)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCTHHHH-HHHHHTCGGGEE-----------------------------------
T ss_pred eeCcCHHHHHHHHHHCCCeEEEEeCCchHHHH-HHHHcCchhhee-----------------------------------
Confidence 46899999999999999999999999877766 666666521100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce-EEecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam~g 771 (1104)
.++.+. ..-...-.|+--..+.+.+.-..+.++++||+.||++|++.|+++ |+| +
T Consensus 129 --~~~~~~---------------------~~~~~Kp~~~~~~~~~~~~~i~~~~~~~iGD~~nDi~~~~~aG~~~i~~-~ 184 (207)
T 2go7_A 129 --EILTSQ---------------------SGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-L 184 (207)
T ss_dssp --EEECGG---------------------GCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-S
T ss_pred --eEEecC---------------------cCCCCCCCcHHHHHHHHHhCCCcccEEEECCCHHHHHHHHHCCCeEEEE-e
Confidence 000000 000000011112234444443456799999999999999999998 677 5
Q ss_pred CchHHHhhhcceecccchhhHHH
Q 001304 772 REGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 772 ~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+.. + .||+++.+++.+..+
T Consensus 185 ~~~-~---~a~~v~~~~~el~~~ 203 (207)
T 2go7_A 185 EST-Y---EGNHRIQALADISRI 203 (207)
T ss_dssp CCS-C---TTEEECSSTTHHHHH
T ss_pred cCC-C---CCCEEeCCHHHHHHH
Confidence 543 3 689999887766553
|
| >3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=98.07 E-value=4.7e-06 Score=88.72 Aligned_cols=119 Identities=17% Similarity=0.210 Sum_probs=84.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++.|++++++|+.....+..+...+|+...-.
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 154 (240)
T 3sd7_A 109 NKIYENMKEILEMLYKNGKILLVATSKPTVFAETILRYFDIDRYFK---------------------------------- 154 (240)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred cccCccHHHHHHHHHHCCCeEEEEeCCcHHHHHHHHHHcCcHhhEE----------------------------------
Confidence 3578999999999999999999999999888888888888743211
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHH----HHHhc-CCeEEEEcCCccChhhhhhcC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVE----LLKSC-DYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~----~lk~~-~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
..+++...+ +.|..+++ .+.-. .+.+++|||+.||+.|.+.|+
T Consensus 155 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~Di~~a~~aG 204 (240)
T 3sd7_A 155 ------------------------------YIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIMVGDRKYDIIGAKKIG 204 (240)
T ss_dssp ------------------------------EEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEEEESSHHHHHHHHHHT
T ss_pred ------------------------------EEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEEECCCHHHHHHHHHCC
Confidence 111111111 12333333 33334 568999999999999999999
Q ss_pred c---eEEecCCchHHH--hhhcceecccchhhHHHH
Q 001304 765 I---GVGISGREGLQA--ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 765 v---GIam~g~~~~~a--~~~AD~vl~~f~~l~~ll 795 (1104)
+ +|++ |+...+. +..||+++.+++.+..++
T Consensus 205 ~~~i~v~~-g~~~~~~~~~~~ad~v~~~~~el~~~l 239 (240)
T 3sd7_A 205 IDSIGVLY-GYGSFEEISESEPTYIVENVESIKDIL 239 (240)
T ss_dssp CEEEEESS-SSCCHHHHHHHCCSEEESSSTTHHHHH
T ss_pred CCEEEEeC-CCCCHHHHhhcCCCEEECCHHHHHHHh
Confidence 9 5555 4433333 357999999988877654
|
| >3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=98.06 E-value=6.6e-06 Score=86.81 Aligned_cols=119 Identities=18% Similarity=0.065 Sum_probs=83.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.....+..+....|+...-..
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 136 (233)
T 3s6j_A 91 IALPGAVELLETLDKENLKWCIATSGGIDTATINLKALKLDINKIN---------------------------------- 136 (233)
T ss_dssp EECTTHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHTTTCCTTSSC----------------------------------
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchhhHHHHHHhcchhhhhhe----------------------------------
Confidence 5679999999999999999999999999988888888887432111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHH-Hh---cCCeEEEEcCCccChhhhhhcCc-
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELL-KS---CDYRTLAIGDGGNDVRMIQKADI- 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~l-k~---~~~~v~~iGDG~ND~~ml~~Adv- 765 (1104)
.+++...+ +.|..+++.+ +. ..+.+++|||+.||+.|.+.|++
T Consensus 137 ------------------------------~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~aG~~ 186 (233)
T 3s6j_A 137 ------------------------------IVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAIWDMLAARRCKAT 186 (233)
T ss_dssp ------------------------------EECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred ------------------------------eeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCHHhHHHHHHCCCE
Confidence 11111111 1123333322 22 34679999999999999999999
Q ss_pred --eEEecCCchHHHhh-hcceecccchhhHHHH
Q 001304 766 --GVGISGREGLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 --GIam~g~~~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+|++..+...+.+. .||+++.++..+..++
T Consensus 187 ~i~v~~g~~~~~~l~~~~ad~v~~~~~el~~~l 219 (233)
T 3s6j_A 187 GVGLLSGGYDIGELERAGALRVYEDPLDLLNHL 219 (233)
T ss_dssp EEEEGGGSCCHHHHHHTTCSEEESSHHHHHHTG
T ss_pred EEEEeCCCCchHhHHhcCCCEEECCHHHHHHHH
Confidence 55553344555555 4999999988777654
|
| >1rku_A Homoserine kinase; phosphoserine phosphatase, phosphoserine:homoserine phosphotransferase, THRH, phosphoserine phosphoryl donor; 1.47A {Pseudomonas aeruginosa} SCOP: c.108.1.11 PDB: 1rkv_A | Back alignment and structure |
|---|
Probab=98.04 E-value=2e-05 Score=81.63 Aligned_cols=123 Identities=23% Similarity=0.261 Sum_probs=88.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++ +++.++|+.....+..+...+|+...-.. .+...+
T Consensus 69 ~~~~g~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--~~~~~~-------------------------- 119 (206)
T 1rku_A 69 KPLEGAVEFVDWLRER-FQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD-------------------------- 119 (206)
T ss_dssp CCCTTHHHHHHHHHTT-SEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECT--------------------------
T ss_pred CCCccHHHHHHHHHhc-CcEEEEECChHHHHHHHHHHcCCcceecc--eeEEcC--------------------------
Confidence 5789999999999999 99999999999999999999997421000 000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeee--ccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICC--RVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~--r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
...... .-.|..|..+++.+......+++|||+.||++|.+.|++++++
T Consensus 120 ----------------------------~~~~~~~~~p~p~~~~~~l~~l~~~~~~~~~iGD~~~Di~~a~~aG~~~~~- 170 (206)
T 1rku_A 120 ----------------------------SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF- 170 (206)
T ss_dssp ----------------------------TSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-
T ss_pred ----------------------------CceEEeeecCCCchHHHHHHHHHhcCCEEEEEeCChhhHHHHHhcCccEEE-
Confidence 000000 1356789999999887788999999999999999999999998
Q ss_pred CCchHHHhhh-ccee-cccchhhHHH
Q 001304 771 GREGLQAARA-ADYS-IGKFRFLKRL 794 (1104)
Q Consensus 771 g~~~~~a~~~-AD~v-l~~f~~l~~l 794 (1104)
+. ..+.+.. ++++ +.++..+..+
T Consensus 171 ~~-~~~~~~~~~~~~~~~~~~~l~~~ 195 (206)
T 1rku_A 171 HA-PENVIREFPQFPAVHTYEDLKRE 195 (206)
T ss_dssp SC-CHHHHHHCTTSCEECSHHHHHHH
T ss_pred CC-cHHHHHHHhhhccccchHHHHHH
Confidence 33 3345554 4554 5565555443
|
| >2wf7_A Beta-PGM, beta-phosphoglucomutase; transition state analogue, haloacid dehalogenase superfamily, isomerase, phosphotransferase; HET: G7P; 1.05A {Lactococcus lactis} PDB: 1o03_A* 1z4n_A* 1z4o_A* 1zol_A 2wf5_A* 2wf6_A* 1o08_A* 2wf8_A* 2wf9_A* 2wfa_A 2whe_A 1lvh_A* 3fm9_A | Back alignment and structure |
|---|
Probab=98.03 E-value=4.8e-06 Score=87.06 Aligned_cols=112 Identities=7% Similarity=-0.012 Sum_probs=76.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.+.++.+++.|+++.++|++ ..+..+...+|+...-.
T Consensus 91 ~~~~~~~~~l~~l~~~g~~~~i~t~~--~~~~~~l~~~~l~~~f~----------------------------------- 133 (221)
T 2wf7_A 91 DVYPGILQLLKDLRSNKIKIALASAS--KNGPFLLERMNLTGYFD----------------------------------- 133 (221)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEECCCC--TTHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEcCc--HHHHHHHHHcChHHHcc-----------------------------------
Confidence 46799999999999999999999998 44555666666532110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc----Ch--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~----sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
..+++.. -| +--..+.+.+.-..+.+++|||+.||++|++.|+++
T Consensus 134 -----------------------------~~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~nDi~~a~~aG~~ 184 (221)
T 2wf7_A 134 -----------------------------AIADPAEVAASKPAPDIFIAAAHAVGVAPSESIGLEDSQAGIQAIKDSGAL 184 (221)
T ss_dssp -----------------------------EECCTTTSSSCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred -----------------------------eEeccccCCCCCCChHHHHHHHHHcCCChhHeEEEeCCHHHHHHHHHCCCE
Confidence 0011111 11 111223333332346799999999999999999999
Q ss_pred EEecCCchHHHhhhcceecccchhhH
Q 001304 767 VGISGREGLQAARAADYSIGKFRFLK 792 (1104)
Q Consensus 767 Iam~g~~~~~a~~~AD~vl~~f~~l~ 792 (1104)
++| .+...+.+ .||+++.+++.+.
T Consensus 185 ~~~-~~~~~~~~-~a~~v~~~~~el~ 208 (221)
T 2wf7_A 185 PIG-VGRPEDLG-DDIVIVPDTSHYT 208 (221)
T ss_dssp EEE-ESCHHHHC-SSSEEESSGGGCC
T ss_pred EEE-ECCHHHhc-cccchhcCHHhCC
Confidence 999 56555565 8999998776653
|
| >1nnl_A L-3-phosphoserine phosphatase; PSP, HPSP, phospho-aspartyl, hydrolase; 1.53A {Homo sapiens} SCOP: c.108.1.4 PDB: 1l8l_A* 1l8o_A | Back alignment and structure |
|---|
Probab=97.98 E-value=1.2e-05 Score=84.68 Aligned_cols=129 Identities=20% Similarity=0.289 Sum_probs=86.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|+++|++++++||.....+..+.+.+|+....--...+.++.
T Consensus 85 ~~~~~g~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~~~f~~~~~~~~------------------------- 139 (225)
T 1nnl_A 85 PHLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATNVFANRLKFYF------------------------- 139 (225)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGGEEEECEEECT-------------------------
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCChHHHHHHHHHHcCCCcccEEeeeEEEcC-------------------------
Confidence 3689999999999999999999999999999999999999842100000000000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-----cChhhHHHHHHHHHh-cC-CeEEEEcCCccChhhhhhcC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-----VTPSQKAQLVELLKS-CD-YRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-----~sP~qK~~iV~~lk~-~~-~~v~~iGDG~ND~~ml~~Ad 764 (1104)
.......+ +.+..|..+++.+.+ .| +.++++||+.||+.|.+.|+
T Consensus 140 ----------------------------~~~~~~~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~vGDs~~Di~~a~~ag 191 (225)
T 1nnl_A 140 ----------------------------NGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPAD 191 (225)
T ss_dssp ----------------------------TSCEEEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSS
T ss_pred ----------------------------CCcEecCCCCCcccCCCchHHHHHHHHHHcCCCcEEEEeCcHHhHHHHHhCC
Confidence 00000111 123456666665543 33 67999999999999999999
Q ss_pred ceEEecCCc-hHHHhhhcceecccchhhHH
Q 001304 765 IGVGISGRE-GLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 765 vGIam~g~~-~~~a~~~AD~vl~~f~~l~~ 793 (1104)
++|++.... .......+|+++.++..+..
T Consensus 192 ~~i~~~~~~~~~~~~~~~~~~~~~~~el~~ 221 (225)
T 1nnl_A 192 AFIGFGGNVIRQQVKDNAKWYITDFVELLG 221 (225)
T ss_dssp EEEEECSSCCCHHHHHHCSEEESCGGGGCC
T ss_pred eEEEecCccccHHHHhcCCeeecCHHHHHH
Confidence 988883221 12234468999988776544
|
| >3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311} | Back alignment and structure |
|---|
Probab=97.98 E-value=1e-05 Score=83.88 Aligned_cols=123 Identities=13% Similarity=0.058 Sum_probs=82.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|++++++|+.....+..+.+..|+...-.. ++.
T Consensus 89 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~~--~~~----------------------------- 137 (214)
T 3e58_A 89 LIFPDVLKVLNEVKSQGLEIGLASSSVKADIFRALEENRLQGFFDI--VLS----------------------------- 137 (214)
T ss_dssp HBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CcCchHHHHHHHHHHCCCCEEEEeCCcHHHHHHHHHHcCcHhheee--Eee-----------------------------
Confidence 4789999999999999999999999999999888888887432110 100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
++ ..-...-.|+--..+.+.+.-..+.+++|||+.||+.|.+.|++++.+...
T Consensus 138 ------~~---------------------~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 138 ------GE---------------------EFKESKPNPEIYLTALKQLNVQASRALIIEDSEKGIAAGVAADVEVWAIRD 190 (214)
T ss_dssp ------GG---------------------GCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTCEEEEECC
T ss_pred ------cc---------------------cccCCCCChHHHHHHHHHcCCChHHeEEEeccHhhHHHHHHCCCEEEEECC
Confidence 00 000000011112233444443457899999999999999999998877333
Q ss_pred ch-HHHhhhcceecccchhhHH
Q 001304 773 EG-LQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 773 ~~-~~a~~~AD~vl~~f~~l~~ 793 (1104)
.+ ......||+++.++..+..
T Consensus 191 ~~~~~~~~~a~~~~~~~~el~~ 212 (214)
T 3e58_A 191 NEFGMDQSAAKGLLDSLTDVLD 212 (214)
T ss_dssp SSSCCCCTTSSEEESSGGGGGG
T ss_pred CCccchhccHHHHHHHHHHHHh
Confidence 21 1123578999988776644
|
| >3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.98 E-value=1.2e-05 Score=87.27 Aligned_cols=120 Identities=18% Similarity=0.158 Sum_probs=81.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++.|+++.++|+.....+..+...+|+......
T Consensus 111 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~~~~~~~~~---------------------------------- 156 (277)
T 3iru_A 111 QLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAAKEQGYTPA---------------------------------- 156 (277)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHHHTTCCCS----------------------------------
T ss_pred ccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhcCcccCCCc----------------------------------
Confidence 5789999999999999999999999998888777777765332000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHH----HHHHHHHhcC-CeEEEEcCCccChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKA----QLVELLKSCD-YRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~----~iV~~lk~~~-~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++...+. -|. .+.+.+.-.. +.+++|||+.||+.|.+.|++
T Consensus 157 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG~ 207 (277)
T 3iru_A 157 -----------------------------STVFATDVVRGRPFPDMALKVALELEVGHVNGCIKVDDTLPGIEEGLRAGM 207 (277)
T ss_dssp -----------------------------EEECGGGSSSCTTSSHHHHHHHHHHTCSCGGGEEEEESSHHHHHHHHHTTC
T ss_pred -----------------------------eEecHHhcCCCCCCHHHHHHHHHHcCCCCCccEEEEcCCHHHHHHHHHCCC
Confidence 1111111111 122 2334444355 789999999999999999995
Q ss_pred ---eEEecCC-----------------------chHHHhh-hcceecccchhhHHHH
Q 001304 766 ---GVGISGR-----------------------EGLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 ---GIam~g~-----------------------~~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+|++.++ ...+.+. .||+++.++..|..++
T Consensus 208 ~~v~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 264 (277)
T 3iru_A 208 WTVGVSCSGNEVGLDREDWQALSSDEQQSYRQHAEQRLFNAGAHYVIDSVADLETVI 264 (277)
T ss_dssp EEEEECSSSTTTCCCHHHHHHSCHHHHHHHHHHHHHHHHHHTCSEEESSGGGTHHHH
T ss_pred eEEEEecCCcccccchhhhhhcchhhhhhhhhhhHHHHhhCCCCEEecCHHHHHHHH
Confidence 5555211 2334444 4899999988887764
|
| >2hcf_A Hydrolase, haloacid dehalogenase-like family; NP_662590.1, ST genomics, PSI-2, protein structure initiative; 1.80A {Chlorobaculum tepidum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.93 E-value=1.6e-05 Score=83.86 Aligned_cols=119 Identities=15% Similarity=0.118 Sum_probs=79.1
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.+.+++.+.++.|++. |+++.++|+.....+.......|+...-.. ++ .+
T Consensus 93 ~~~~~~~~~l~~l~~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~--~~------------------------- 143 (234)
T 2hcf_A 93 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GA--FA------------------------- 143 (234)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EE--CT-------------------------
T ss_pred CcCCCHHHHHHHHHhCCCceEEEEcCCcHHHHHHHHHHCCchhhcCc--ce--ec-------------------------
Confidence 4679999999999999 999999999999888888888887432110 00 00
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccC--hhhHHHH----HHHHH--hcCCeEEEEcCCccChhhhhhc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQL----VELLK--SCDYRTLAIGDGGNDVRMIQKA 763 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~s--P~qK~~i----V~~lk--~~~~~v~~iGDG~ND~~ml~~A 763 (1104)
.... |+-+..+ .+.+. -..+.+++|||+.||+.|.+.|
T Consensus 144 ----------------------------------~~~~~~~k~~~~~~~~~~~~lg~~~~~~~~i~iGD~~~Di~~a~~a 189 (234)
T 2hcf_A 144 ----------------------------------DDALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCAREL 189 (234)
T ss_dssp ----------------------------------TTCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTT
T ss_pred ----------------------------------CCCcCccchHHHHHHHHHHHhCCCCCcccEEEECCCHHHHHHHHHC
Confidence 0111 1112222 23332 2336799999999999999999
Q ss_pred Cce---EEecCCchHHHhh--hcceecccchhhHHHH
Q 001304 764 DIG---VGISGREGLQAAR--AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 764 dvG---Iam~g~~~~~a~~--~AD~vl~~f~~l~~ll 795 (1104)
+++ |+. |....+... .||+++.+++.+..++
T Consensus 190 G~~~i~v~~-~~~~~~~~~~~~a~~v~~~~~el~~~l 225 (234)
T 2hcf_A 190 DARSIAVAT-GNFTMEELARHKPGTLFKNFAETDEVL 225 (234)
T ss_dssp TCEEEEECC-SSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred CCcEEEEcC-CCCCHHHHHhCCCCEEeCCHHhHHHHH
Confidence 955 443 333333333 3899998887776654
|
| >3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis} | Back alignment and structure |
|---|
Probab=97.93 E-value=2.8e-05 Score=82.21 Aligned_cols=105 Identities=14% Similarity=0.041 Sum_probs=73.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.+.++.|+++|+++.++||.....+..+++.+|+..--.. .+...+|.
T Consensus 92 ~~~~g~~~~l~~l~~~g~~~~ivS~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~------------------------- 145 (232)
T 3fvv_A 92 SLTVQAVDVVRGHLAAGDLCALVTATNSFVTAPIARAFGVQHLIAT-DPEYRDGR------------------------- 145 (232)
T ss_dssp GCCHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCCEEEEC-EEEEETTE-------------------------
T ss_pred hcCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCEEEEc-ceEEECCE-------------------------
Confidence 5799999999999999999999999999999999999998311000 00000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceee-eccChhhHHHHHHHHH-hcC------CeEEEEcCCccChhhhhhcC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAIC-CRVTPSQKAQLVELLK-SCD------YRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~-~r~sP~qK~~iV~~lk-~~~------~~v~~iGDG~ND~~ml~~Ad 764 (1104)
....+. ....+..|...++.+. +.| +.++++||+.||++|++.|+
T Consensus 146 ---------------------------~~g~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~~~~~~vGDs~~D~~~~~~ag 198 (232)
T 3fvv_A 146 ---------------------------YTGRIEGTPSFREGKVVRVNQWLAGMGLALGDFAESYFYSDSVNDVPLLEAVT 198 (232)
T ss_dssp ---------------------------EEEEEESSCSSTHHHHHHHHHHHHHTTCCGGGSSEEEEEECCGGGHHHHHHSS
T ss_pred ---------------------------EeeeecCCCCcchHHHHHHHHHHHHcCCCcCchhheEEEeCCHhhHHHHHhCC
Confidence 000010 1123456776665543 344 57999999999999999999
Q ss_pred ceEEec
Q 001304 765 IGVGIS 770 (1104)
Q Consensus 765 vGIam~ 770 (1104)
+++++.
T Consensus 199 ~~~~~~ 204 (232)
T 3fvv_A 199 RPIAAN 204 (232)
T ss_dssp EEEEES
T ss_pred CeEEEC
Confidence 999993
|
| >3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=97.92 E-value=1.7e-05 Score=80.27 Aligned_cols=59 Identities=15% Similarity=0.062 Sum_probs=42.2
Q ss_pred HHHHHhcCCeEEEEcCCccChhhhhhcCc---eEEecCCchHHHh----hhcceecccchhhHHHHH
Q 001304 737 VELLKSCDYRTLAIGDGGNDVRMIQKADI---GVGISGREGLQAA----RAADYSIGKFRFLKRLIL 796 (1104)
Q Consensus 737 V~~lk~~~~~v~~iGDG~ND~~ml~~Adv---GIam~g~~~~~a~----~~AD~vl~~f~~l~~lll 796 (1104)
.+.+.-..+.+++|||+.||+.|.+.|++ +|.. |....... ..+|+++.+...+..+++
T Consensus 111 ~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~~-g~~~~~~~~~~~~~~d~v~~~l~el~~~l~ 176 (179)
T 3l8h_A 111 ARRYDVDLAGVPAVGDSLRDLQAAAQAGCAPWLVQT-GNGRKTLAQGGLPEGTRVCEDLAAVAEQLL 176 (179)
T ss_dssp HHHHTCCCTTCEEEESSHHHHHHHHHHTCEEEEEST-TTHHHHHHHCCCCTTEEEESSHHHHHHHHH
T ss_pred HHHcCCCHHHEEEECCCHHHHHHHHHCCCcEEEECC-CCcchhhhhcccCCCcEEecCHHHHHHHHH
Confidence 33333345789999999999999999996 5544 54443333 357999999888776653
|
| >2hsz_A Novel predicted phosphatase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: UNL; 1.90A {Haemophilus somnus 129PT} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.91 E-value=1.2e-05 Score=86.03 Aligned_cols=122 Identities=20% Similarity=0.261 Sum_probs=81.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.++++.|++.|++++++|+.....+..+...+|+...-. .+
T Consensus 113 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~gl~~~f~---~~----------------------------- 160 (243)
T 2hsz_A 113 SRLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFS---EM----------------------------- 160 (243)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCS---EE-----------------------------
T ss_pred CccCCCHHHHHHHHHHCCCEEEEEECCcHHHHHHHHHHcCchheEE---EE-----------------------------
Confidence 3578999999999999999999999999998899999988732111 00
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-E
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-G 768 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-a 768 (1104)
+.+. -+.+..| .--..+++.+.-..+.+++|||+.||++|.+.|++++ +
T Consensus 161 -----~~~~-----------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~ 212 (243)
T 2hsz_A 161 -----LGGQ-----------------------SLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVG 212 (243)
T ss_dssp -----ECTT-----------------------TSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEE
T ss_pred -----Eecc-----------------------cCCCCCcCHHHHHHHHHHhCcChhhEEEEcCCHHHHHHHHHCCCeEEE
Confidence 0000 0011122 2223344444434567999999999999999999995 4
Q ss_pred ec-CCc-hHH-HhhhcceecccchhhHH
Q 001304 769 IS-GRE-GLQ-AARAADYSIGKFRFLKR 793 (1104)
Q Consensus 769 m~-g~~-~~~-a~~~AD~vl~~f~~l~~ 793 (1104)
+. |.. ..+ ....||+++.++..+..
T Consensus 213 v~~g~~~~~~~~~~~ad~vi~~~~el~~ 240 (243)
T 2hsz_A 213 LTYGYNYNIPIAQSKPDWIFDDFADILK 240 (243)
T ss_dssp ESSSCSTTCCGGGGCCSEEESSGGGGGG
T ss_pred EcCCCCchhhhhhCCCCEEECCHHHHHH
Confidence 42 211 112 34578999987666543
|
| >3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=97.89 E-value=1.5e-05 Score=83.88 Aligned_cols=119 Identities=13% Similarity=0.071 Sum_probs=82.8
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 95 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~---------------------------------- 140 (230)
T 3um9_A 95 LTPFADVPQALQQLRAAGLKTAILSNGSRHSIRQVVGNSGLTNSFD---------------------------------- 140 (230)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHHCCChhhcc----------------------------------
Confidence 3578999999999999999999999999888888888888732111
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHH----HHHHHHhcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++...+. -|.. +.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 141 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~ 190 (230)
T 3um9_A 141 ------------------------------HLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCNSWDATGAKYFGY 190 (230)
T ss_dssp ------------------------------EEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTC
T ss_pred ------------------------------eeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHCCC
Confidence 1111111111 1222 333333344779999999999999999999
Q ss_pred eEEecC---CchHHHhhhcceecccchhhHHH
Q 001304 766 GVGISG---REGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 766 GIam~g---~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
++++.. +.....+..+|+++.++..+..+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~ 222 (230)
T 3um9_A 191 PVCWINRSNGVFDQLGVVPDIVVSDVGVLASR 222 (230)
T ss_dssp CEEEECTTSCCCCCSSCCCSEEESSHHHHHHT
T ss_pred EEEEEeCCCCccccccCCCcEEeCCHHHHHHH
Confidence 998822 22222344789999987776554
|
| >3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis} | Back alignment and structure |
|---|
Probab=97.87 E-value=2.8e-05 Score=82.06 Aligned_cols=115 Identities=17% Similarity=0.157 Sum_probs=79.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.....+..+....|+...-.
T Consensus 103 ~~~~~~~~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 147 (231)
T 3kzx_A 103 MLNDGAIELLDTLKENNITMAIVSNKNGERLRSEIHHKNLTHYFD----------------------------------- 147 (231)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred eECcCHHHHHHHHHHCCCeEEEEECCCHHHHHHHHHHCCchhhee-----------------------------------
Confidence 468999999999999999999999999988888888888742111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh------hhHHHHHHHHHhcCC-eEEEEcCCccChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP------SQKAQLVELLKSCDY-RTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP------~qK~~iV~~lk~~~~-~v~~iGDG~ND~~ml~~Adv 765 (1104)
..+++.-.+ +--..+.+.+.-..+ .+++|||+.||+.|.+.|++
T Consensus 148 -----------------------------~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~vGD~~~Di~~a~~aG~ 198 (231)
T 3kzx_A 148 -----------------------------SIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFFIGDSISDIQSAIEAGC 198 (231)
T ss_dssp -----------------------------EEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEEEESSHHHHHHHHHTTC
T ss_pred -----------------------------eEEcccccCCCCCChHHHHHHHHHcCCCcccCEEEEcCCHHHHHHHHHCCC
Confidence 111111111 111233444443445 79999999999999999997
Q ss_pred -eEEecCCchHHHhhhcceecccchhhHHHH
Q 001304 766 -GVGISGREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 -GIam~g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+|.+ ++... ..+|+++.+++.+..++
T Consensus 199 ~~v~~-~~~~~---~~~~~~~~~~~el~~~l 225 (231)
T 3kzx_A 199 LPIKY-GSTNI---IKDILSFKNFYDIRNFI 225 (231)
T ss_dssp EEEEE-CC--------CCEEESSHHHHHHHH
T ss_pred eEEEE-CCCCC---CCCceeeCCHHHHHHHH
Confidence 5566 55432 46788888887776654
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} | Back alignment and structure |
|---|
Probab=97.85 E-value=8.1e-05 Score=81.77 Aligned_cols=66 Identities=24% Similarity=0.295 Sum_probs=52.5
Q ss_pred eeeccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccchh
Q 001304 724 ICCRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFRF 790 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~~ 790 (1104)
.+.++.|. .|...++.+.+ . .+.++++||+.||++|++.|++|++| ++.....+..||+++.+...
T Consensus 201 ~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~GDs~~D~~~~~~ag~~~~~-~~~~~~~~~~a~~v~~~~~~ 272 (289)
T 3gyg_A 201 YDVDFIPIGTGKNEIVTFMLEKYNLNTERAIAFGDSGNDVRMLQTVGNGYLL-KNATQEAKNLHNLITDSEYS 272 (289)
T ss_dssp EEEEEEESCCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHTTSSEEEEC-TTCCHHHHHHCCCBCSSCHH
T ss_pred eEEEEEeCCCCHHHHHHHHHHHcCCChhhEEEEcCCHHHHHHHHhCCcEEEE-CCccHHHHHhCCEEcCCCCc
Confidence 45666664 68887776654 2 35799999999999999999999999 77777788899999876443
|
| >3nuq_A Protein SSM1, putative nucleotide phosphatase; suppresses the 6-AU sensitivity of transcription elongation II; 1.70A {Saccharomyces cerevisiae} PDB: 3onn_A 3opx_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=1.4e-05 Score=87.48 Aligned_cols=122 Identities=15% Similarity=0.110 Sum_probs=82.6
Q ss_pred cCCCChHHHHHHHHHcCC--eEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 613 RLQDGVPETIETLRKAGI--NFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI--~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
++.+++.++++.|++.|+ +++++|+.....+......+|+...-.. ++..+
T Consensus 142 ~~~p~~~~~L~~L~~~g~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~--v~~~~------------------------- 194 (282)
T 3nuq_A 142 KPDIPLRNMLLRLRQSGKIDKLWLFTNAYKNHAIRCLRLLGIADLFDG--LTYCD------------------------- 194 (282)
T ss_dssp CCCHHHHHHHHHHHHSSSCSEEEEECSSCHHHHHHHHHHHTCTTSCSE--EECCC-------------------------
T ss_pred CcChhHHHHHHHHHhCCCCceEEEEECCChHHHHHHHHhCCcccccce--EEEec-------------------------
Confidence 467899999999999999 9999999999888888888887432111 10000
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeec-cChhhHHHHHHH----HHhcC-CeEEEEcCCccChhhhhhcC
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCR-VTPSQKAQLVEL----LKSCD-YRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r-~sP~qK~~iV~~----lk~~~-~~v~~iGDG~ND~~ml~~Ad 764 (1104)
..... ..++-|..+++. +.-.. +.+++|||+.||+.|.+.|+
T Consensus 195 --------------------------------~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~i~vGD~~~Di~~a~~aG 242 (282)
T 3nuq_A 195 --------------------------------YSRTDTLVCKPHVKAFEKAMKESGLARYENAYFIDDSGKNIETGIKLG 242 (282)
T ss_dssp --------------------------------CSSCSSCCCTTSHHHHHHHHHHHTCCCGGGEEEEESCHHHHHHHHHHT
T ss_pred --------------------------------cCCCcccCCCcCHHHHHHHHHHcCCCCcccEEEEcCCHHHHHHHHHCC
Confidence 00000 112334444433 33344 78999999999999999999
Q ss_pred ceEEecCCchHHH------hhhcceecccchhhHHH
Q 001304 765 IGVGISGREGLQA------ARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 765 vGIam~g~~~~~a------~~~AD~vl~~f~~l~~l 794 (1104)
+|++| ++..... ...||+++.+...|..+
T Consensus 243 ~~~~~-~~~~~~~~~~~~~~~~ad~vi~sl~el~~~ 277 (282)
T 3nuq_A 243 MKTCI-HLVENEVNEILGQTPEGAIVISDILELPHV 277 (282)
T ss_dssp CSEEE-EECSCCC----CCCCTTCEEESSGGGGGGT
T ss_pred CeEEE-EEcCCccccccccCCCCCEEeCCHHHHHHH
Confidence 98877 3322211 23789999987776654
|
| >4gxt_A A conserved functionally unknown protein; structural genomics, PSI-biology; 1.82A {Anaerococcus prevotii} | Back alignment and structure |
|---|
Probab=97.83 E-value=1.1e-05 Score=91.86 Aligned_cols=42 Identities=17% Similarity=0.211 Sum_probs=39.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.++.+++++.|+.|+++|++|+|+||.....+..+|.++|+.
T Consensus 220 ir~~p~~~eLi~~L~~~G~~v~IVSgg~~~~v~~ia~~lg~~ 261 (385)
T 4gxt_A 220 IRTLDEMVDLYRSLEENGIDCYIVSASFIDIVRAFATDTNNN 261 (385)
T ss_dssp CEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHCTTSS
T ss_pred ceeCHHHHHHHHHHHHCCCeEEEEcCCcHHHHHHHHHHhCcc
Confidence 357899999999999999999999999999999999999873
|
| >2om6_A Probable phosphoserine phosphatase; rossmann fold, B-hairpin, four-helix bundle, structural GENO NPPSFA; 2.20A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.82 E-value=2.2e-05 Score=82.77 Aligned_cols=123 Identities=12% Similarity=0.117 Sum_probs=79.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC---HhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~---~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1104)
.+.+++.+.++.|++.|+++.++|+.. ...+.......|+...-.. ++.
T Consensus 99 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~~~~l~~~~l~~~f~~--~~~-------------------------- 150 (235)
T 2om6_A 99 LVLEGTKEALQFVKERGLKTAVIGNVMFWPGSYTRLLLERFGLMEFIDK--TFF-------------------------- 150 (235)
T ss_dssp GBCTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCGGGCSE--EEE--------------------------
T ss_pred CcCccHHHHHHHHHHCCCEEEEEcCCcccchhHHHHHHHhCCcHHHhhh--hee--------------------------
Confidence 458999999999999999999999998 7777777787776322110 100
Q ss_pred CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCce
Q 001304 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG 766 (1104)
Q Consensus 690 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvG 766 (1104)
+.. .....| .--..+.+.+.-..+.+++|||+. ||+.|.+.|+++
T Consensus 151 ---------~~~-----------------------~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~nDi~~a~~aG~~ 198 (235)
T 2om6_A 151 ---------ADE-----------------------VLSYKPRKEMFEKVLNSFEVKPEESLHIGDTYAEDYQGARKVGMW 198 (235)
T ss_dssp ---------HHH-----------------------HTCCTTCHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTSE
T ss_pred ---------ccc-----------------------cCCCCCCHHHHHHHHHHcCCCccceEEECCChHHHHHHHHHCCCE
Confidence 000 000111 111122233222346899999999 999999999999
Q ss_pred EEec--CCchHHHhhhcceecccchhhHHHH
Q 001304 767 VGIS--GREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 767 Iam~--g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+++. |++..+.+..+|+++.++..+..++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 229 (235)
T 2om6_A 199 AVWINQEGDKVRKLEERGFEIPSIANLKDVI 229 (235)
T ss_dssp EEEECTTCCSCEEEETTEEEESSGGGHHHHH
T ss_pred EEEECCCCCCcccCCCCcchHhhHHHHHHHH
Confidence 9882 2222223346899988877665543
|
| >2nyv_A Pgpase, PGP, phosphoglycolate phosphatase; structural genomics, PSI-2, protein structure initiative; 2.10A {Aquifex aeolicus} PDB: 2yy6_A | Back alignment and structure |
|---|
Probab=97.82 E-value=2e-05 Score=82.84 Aligned_cols=125 Identities=18% Similarity=0.236 Sum_probs=82.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.. ++ .+.
T Consensus 82 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~gl~~~f~~--i~--~~~------------------------ 133 (222)
T 2nyv_A 82 TKPYPEIPYTLEALKSKGFKLAVVSNKLEELSKKILDILNLSGYFDL--IV--GGD------------------------ 133 (222)
T ss_dssp CEECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EE--CTT------------------------
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCHHHheE--EE--ecC------------------------
Confidence 35789999999999999999999999998888888888887321110 00 000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce-EEec
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGIS 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam~ 770 (1104)
......-.|.--..+++.+.-..+.+++|||+.||++|.+.|+++ |++.
T Consensus 134 ------------------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~i~v~ 183 (222)
T 2nyv_A 134 ------------------------------TFGEKKPSPTPVLKTLEILGEEPEKALIVGDTDADIEAGKRAGTKTALAL 183 (222)
T ss_dssp ------------------------------SSCTTCCTTHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEET
T ss_pred ------------------------------cCCCCCCChHHHHHHHHHhCCCchhEEEECCCHHHHHHHHHCCCeEEEEc
Confidence 000001112222334444443456799999999999999999998 6662
Q ss_pred -CCchHHHhhhcceecccchhhHHHH
Q 001304 771 -GREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 771 -g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
|....+. ..+|+++.++..+..++
T Consensus 184 ~g~~~~~~-~~~~~~~~~~~el~~~l 208 (222)
T 2nyv_A 184 WGYVKLNS-QIPDFTLSRPSDLVKLM 208 (222)
T ss_dssp TSSCSCCC-CCCSEEESSTTHHHHHH
T ss_pred CCCCCccc-cCCCEEECCHHHHHHHH
Confidence 2222222 56899998877776654
|
| >3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=97.81 E-value=2e-05 Score=83.11 Aligned_cols=126 Identities=13% Similarity=0.044 Sum_probs=85.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.. ++..+
T Consensus 98 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~-------------------------- 149 (233)
T 3umb_A 98 LSAFPENVPVLRQLREMGLPLGILSNGNPQMLEIAVKSAGMSGLFDH--VLSVD-------------------------- 149 (233)
T ss_dssp CEECTTHHHHHHHHHTTTCCEEEEESSCHHHHHHHHHTTTCTTTCSE--EEEGG--------------------------
T ss_pred CCCCCCHHHHHHHHHhCCCcEEEEeCCCHHHHHHHHHHCCcHhhcCE--EEEec--------------------------
Confidence 35789999999999999999999999999888888888887432111 11000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec-
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS- 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~- 770 (1104)
..-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++++-
T Consensus 150 ------------------------------~~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~~G~~~~~v~ 199 (233)
T 3umb_A 150 ------------------------------AVRLYKTAPAAYALAPRAFGVPAAQILFVSSNGWDACGATWHGFTTFWIN 199 (233)
T ss_dssp ------------------------------GTTCCTTSHHHHTHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCEEEEEC
T ss_pred ------------------------------ccCCCCcCHHHHHHHHHHhCCCcccEEEEeCCHHHHHHHHHcCCEEEEEc
Confidence 0000001111112233444334578999999999999999999999882
Q ss_pred --CCchHHHhhhcceecccchhhHHHH
Q 001304 771 --GREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 771 --g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
++.....+..+|+++.++..+..++
T Consensus 200 ~~~~~~~~~~~~~~~v~~~~~el~~~l 226 (233)
T 3umb_A 200 RLGHPPEALDVAPAAAGHDMRDLLQFV 226 (233)
T ss_dssp TTCCCCCSSSCCCSEEESSHHHHHHHH
T ss_pred CCCCCchhccCCCCEEECCHHHHHHHH
Confidence 2222333447999999988877764
|
| >3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A | Back alignment and structure |
|---|
Probab=97.79 E-value=3.4e-05 Score=81.39 Aligned_cols=123 Identities=13% Similarity=0.100 Sum_probs=82.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++. +++.++|+.....+.......|+...-.. ++.
T Consensus 100 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~~~f~~--~~~----------------------------- 147 (234)
T 3u26_A 100 ELYPEVVEVLKSLKGK-YHVGMITDSDTEQAMAFLDALGIKDLFDS--ITT----------------------------- 147 (234)
T ss_dssp CBCTTHHHHHHHHTTT-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred CcCcCHHHHHHHHHhC-CcEEEEECCCHHHHHHHHHHcCcHHHcce--eEe-----------------------------
Confidence 4679999999999999 99999999999888888888887322110 100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcC---ceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKAD---IGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~Ad---vGIa 768 (1104)
+.. .-...-.|.--..+.+.+.-..+.+++|||+. ||+.|.+.|+ ++|+
T Consensus 148 ------~~~---------------------~~~~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~ 200 (234)
T 3u26_A 148 ------SEE---------------------AGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLD 200 (234)
T ss_dssp ------HHH---------------------HTBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred ------ccc---------------------cCCCCcCHHHHHHHHHHcCCCchhEEEEcCCcHHHHHHHHHcCCEEEEEC
Confidence 000 00000111112223334433457899999997 9999999999 4666
Q ss_pred ecCCchHHHhhhcceecccchhhHHHH
Q 001304 769 ISGREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 769 m~g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+ |+...+.+..||+++.++..+..++
T Consensus 201 ~-~~~~~~~~~~a~~~~~~~~el~~~l 226 (234)
T 3u26_A 201 R-KGEKREFWDKCDFIVSDLREVIKIV 226 (234)
T ss_dssp S-SSTTGGGGGGCSEEESSTHHHHHHH
T ss_pred C-CCCccccccCCCEeeCCHHHHHHHH
Confidence 6 5555555668999999988776654
|
| >4eek_A Beta-phosphoglucomutase-related protein; hydrolase, magnesium binding site, enzyme function initiativ; 1.60A {Deinococcus radiodurans} PDB: 4eel_A* 4een_A | Back alignment and structure |
|---|
Probab=97.77 E-value=5.4e-05 Score=81.45 Aligned_cols=120 Identities=15% Similarity=0.089 Sum_probs=82.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++.|+++.++|+.....+..+....|+..
T Consensus 109 ~~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~------------------------------------- 151 (259)
T 4eek_A 109 VTAIEGAAETLRALRAAGVPFAIGSNSERGRLHLKLRVAGLTE------------------------------------- 151 (259)
T ss_dssp CEECTTHHHHHHHHHHHTCCEEEECSSCHHHHHHHHHHTTCHH-------------------------------------
T ss_pred CCcCccHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHhcChHh-------------------------------------
Confidence 4567999999999999999999999999988888888887621
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccc-eeeeccCh-hh--HHHH----HHHHHhcCCeEEEEcCCccChhhhhhc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRT-AICCRVTP-SQ--KAQL----VELLKSCDYRTLAIGDGGNDVRMIQKA 763 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~-~i~~r~sP-~q--K~~i----V~~lk~~~~~v~~iGDG~ND~~ml~~A 763 (1104)
.| .. .++.+..+ .. |..+ .+.+.-..+.+++|||+.||+.|.+.|
T Consensus 152 --------------------~f-------~~~i~~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~i~iGD~~~Di~~a~~a 204 (259)
T 4eek_A 152 --------------------LA-------GEHIYDPSWVGGRGKPHPDLYTFAAQQLGILPERCVVIEDSVTGGAAGLAA 204 (259)
T ss_dssp --------------------HH-------CSCEECGGGGTTCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHH
T ss_pred --------------------hc-------cceEEeHhhcCcCCCCChHHHHHHHHHcCCCHHHEEEEcCCHHHHHHHHHC
Confidence 00 01 11122112 11 2222 333322347799999999999999999
Q ss_pred CceE-Eec-CCc-----hHHHhh-hcceecccchhhHHHH
Q 001304 764 DIGV-GIS-GRE-----GLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 764 dvGI-am~-g~~-----~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+++. ++. |.. ..+... .||+++.++..+..++
T Consensus 205 G~~~i~v~~g~~~~~~~~~~~~~~~ad~vi~~l~el~~~l 244 (259)
T 4eek_A 205 GATLWGLLVPGHPHPDGAAALSRLGAARVLTSHAELRAAL 244 (259)
T ss_dssp TCEEEEECCTTSCCSSCHHHHHHHTCSEEECSHHHHHHHH
T ss_pred CCEEEEEccCCCcccccHHHHHhcCcchhhCCHHHHHHHH
Confidence 9984 442 211 223343 5899999988887765
|
| >2hdo_A Phosphoglycolate phosphatase; NP_784602.1, structur genomics, PSI-2, protein structure initiative, joint center structural genomics; HET: MSE; 1.50A {Lactobacillus plantarum} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.77 E-value=1.3e-05 Score=83.13 Aligned_cols=115 Identities=20% Similarity=0.255 Sum_probs=77.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++. +++.++|+.....+..+...+|+...-
T Consensus 83 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~~l~~~f------------------------------------ 125 (209)
T 2hdo_A 83 ELYPGITSLFEQLPSE-LRLGIVTSQRRNELESGMRSYPFMMRM------------------------------------ 125 (209)
T ss_dssp EECTTHHHHHHHSCTT-SEEEEECSSCHHHHHHHHTTSGGGGGE------------------------------------
T ss_pred CcCCCHHHHHHHHHhc-CcEEEEeCCCHHHHHHHHHHcChHhhc------------------------------------
Confidence 4689999999999999 999999999988888877777762110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH------HHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK------~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
...+++.-....| ..+.+.+.-..+.+++|||+.||+.|.+.|+++
T Consensus 126 ----------------------------~~~~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~i~vGD~~~Di~~a~~aG~~ 177 (209)
T 2hdo_A 126 ----------------------------AVTISADDTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVD 177 (209)
T ss_dssp ----------------------------EEEECGGGSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCE
T ss_pred ----------------------------cEEEecCcCCCCCCCcHHHHHHHHHcCCCcccEEEECCChhhHHHHHHcCCe
Confidence 0111111111223 223333333346799999999999999999999
Q ss_pred EEec--CCc-hHHHhhhcceecccchhhHH
Q 001304 767 VGIS--GRE-GLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 767 Iam~--g~~-~~~a~~~AD~vl~~f~~l~~ 793 (1104)
+++. |.. ....+. ||+++.++..+..
T Consensus 178 ~~~~~~~~~~~~~~~~-a~~~~~~~~el~~ 206 (209)
T 2hdo_A 178 FGLAVWGMDPNADHQK-VAHRFQKPLDILE 206 (209)
T ss_dssp EEEEGGGCCTTGGGSC-CSEEESSGGGGGG
T ss_pred EEEEcCCCCChhhhcc-CCEEeCCHHHHHH
Confidence 9872 222 222333 9999987766543
|
| >2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00012 Score=77.90 Aligned_cols=119 Identities=14% Similarity=0.171 Sum_probs=79.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++.|+++.++|+.....+..+...+|+...-.
T Consensus 94 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~----------------------------------- 138 (241)
T 2hoq_A 94 REVPGARKVLIRLKELGYELGIITDGNPVKQWEKILRLELDDFFE----------------------------------- 138 (241)
T ss_dssp CBCTTHHHHHHHHHHHTCEEEEEECSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEECCCchhHHHHHHHcCcHhhcc-----------------------------------
Confidence 468999999999999999999999998888888888888632111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHH----HHHHHHHhcCCeEEEEcCCc-cChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKA----QLVELLKSCDYRTLAIGDGG-NDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~----~iV~~lk~~~~~v~~iGDG~-ND~~ml~~Adv 765 (1104)
..++++..+. -|. .+.+.+.-..+.+++|||+. ||+.|.+.|++
T Consensus 139 -----------------------------~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~iGD~~~~Di~~a~~aG~ 189 (241)
T 2hoq_A 139 -----------------------------HVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGM 189 (241)
T ss_dssp -----------------------------EEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred -----------------------------EEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHCCC
Confidence 1111111111 112 22333333446799999998 99999999999
Q ss_pred eEEe--cCCchHHHhh---hcceecccchhhHHHH
Q 001304 766 GVGI--SGREGLQAAR---AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 GIam--~g~~~~~a~~---~AD~vl~~f~~l~~ll 795 (1104)
++.. .|....+... .+|+++.+...+..++
T Consensus 190 ~~~~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~l 224 (241)
T 2hoq_A 190 KTVWFRYGKHSERELEYRKYADYEIDNLESLLEVL 224 (241)
T ss_dssp EEEEECCSCCCHHHHTTGGGCSEEESSTTHHHHHH
T ss_pred EEEEECCCCCCcccccccCCCCEEECCHHHHHHHH
Confidence 8644 1332222232 6899998877765543
|
| >2no4_A (S)-2-haloacid dehalogenase IVA; HAD superfamily, rossman fold, hydrol; 1.93A {Burkholderia cepacia} PDB: 2no5_A* | Back alignment and structure |
|---|
Probab=97.75 E-value=5.1e-05 Score=80.65 Aligned_cols=119 Identities=12% Similarity=0.033 Sum_probs=80.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|+++|+++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~~~l~~~f~----------------------------------- 149 (240)
T 2no4_A 105 SAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLD----------------------------------- 149 (240)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHhcCcHHHcC-----------------------------------
Confidence 578999999999999999999999999988888888888732211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
..++++. .|.--..+.+.+.-..+.+++|||+.||+.|.+.|+++
T Consensus 150 -----------------------------~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~ 200 (240)
T 2no4_A 150 -----------------------------SCLSADDLKIYKPDPRIYQFACDRLGVNPNEVCFVSSNAWDLGGAGKFGFN 200 (240)
T ss_dssp -----------------------------EEEEGGGTTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHHTCE
T ss_pred -----------------------------EEEEccccCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHCCCE
Confidence 0111111 11112223333333456799999999999999999976
Q ss_pred EEe--cCCchHHHhhhc-ceecccchhhHHHH
Q 001304 767 VGI--SGREGLQAARAA-DYSIGKFRFLKRLI 795 (1104)
Q Consensus 767 Iam--~g~~~~~a~~~A-D~vl~~f~~l~~ll 795 (1104)
+.. .|+........+ |+++.++..+..++
T Consensus 201 ~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l 232 (240)
T 2no4_A 201 TVRINRQGNPPEYEFAPLKHQVNSLSELWPLL 232 (240)
T ss_dssp EEEECTTCCCCCCTTSCCSEEESSGGGHHHHH
T ss_pred EEEECCCCCCCcccCCCCceeeCCHHHHHHHH
Confidence 533 133222223457 99998877765543
|
| >3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.72 E-value=5.3e-05 Score=80.04 Aligned_cols=121 Identities=16% Similarity=0.117 Sum_probs=82.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+ .|+++.++|+.....+......+|+...-.
T Consensus 107 ~~~~~~~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~~l~~~f~----------------------------------- 150 (240)
T 3qnm_A 107 GLMPHAKEVLEYLA-PQYNLYILSNGFRELQSRKMRSAGVDRYFK----------------------------------- 150 (240)
T ss_dssp CBSTTHHHHHHHHT-TTSEEEEEECSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred CcCccHHHHHHHHH-cCCeEEEEeCCchHHHHHHHHHcChHhhce-----------------------------------
Confidence 56899999999999 999999999998888888888777632211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHH-HHHh---cCCeEEEEcCCc-cChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVE-LLKS---CDYRTLAIGDGG-NDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~-~lk~---~~~~v~~iGDG~-ND~~ml~~Adv 765 (1104)
..+++...+ +-|..+++ .++. ..+.+++|||+. ||+.|.+.|++
T Consensus 151 -----------------------------~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~~Di~~a~~aG~ 201 (240)
T 3qnm_A 151 -----------------------------KIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGDSWEADITGAHGVGM 201 (240)
T ss_dssp -----------------------------EEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHTTC
T ss_pred -----------------------------eEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECCCchHhHHHHHHcCC
Confidence 111111111 12233333 2333 346899999995 99999999999
Q ss_pred eEEecCCchH--HHhhhcceecccchhhHHHHHhhhhh
Q 001304 766 GVGISGREGL--QAARAADYSIGKFRFLKRLILVHGRY 801 (1104)
Q Consensus 766 GIam~g~~~~--~a~~~AD~vl~~f~~l~~lll~~GR~ 801 (1104)
++++ .+.+. .....+|+++.++..+..+ .+|+.
T Consensus 202 ~~~~-~~~~~~~~~~~~~d~vi~sl~e~~~~--~~~~~ 236 (240)
T 3qnm_A 202 HQAF-YNVTERTVFPFQPTYHIHSLKELMNL--LEGHH 236 (240)
T ss_dssp EEEE-ECCSCCCCCSSCCSEEESSTHHHHHH--TC---
T ss_pred eEEE-EcCCCCCCcCCCCceEECCHHHHHHH--Hhccc
Confidence 9988 44333 3345799999998877664 45653
|
| >3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.72 E-value=6.7e-05 Score=78.75 Aligned_cols=115 Identities=15% Similarity=0.033 Sum_probs=79.2
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
++.+++.+.++.|+++| +++.++|+.....+..+...+|+...-.
T Consensus 105 ~~~~~~~~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~~~~~f~---------------------------------- 150 (234)
T 3ddh_A 105 ELLPGVKETLKTLKETGKYKLVVATKGDLLDQENKLERSGLSPYFD---------------------------------- 150 (234)
T ss_dssp CBCTTHHHHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHTCGGGCS----------------------------------
T ss_pred CcCccHHHHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhCcHhhhh----------------------------------
Confidence 57899999999999999 9999999988888777777777632111
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHH----hcCCeEEEEcCCc-cChhhhhhcCce
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK----SCDYRTLAIGDGG-NDVRMIQKADIG 766 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk----~~~~~v~~iGDG~-ND~~ml~~AdvG 766 (1104)
.+.+. ++.|..+++.+. -..+.+++|||+. ||+.|.+.|+++
T Consensus 151 -------------------------------~~~~~--~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~Di~~a~~aG~~ 197 (234)
T 3ddh_A 151 -------------------------------HIEVM--SDKTEKEYLRLLSILQIAPSELLMVGNSFKSDIQPVLSLGGY 197 (234)
T ss_dssp -------------------------------EEEEE--SCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHHTCE
T ss_pred -------------------------------eeeec--CCCCHHHHHHHHHHhCCCcceEEEECCCcHHHhHHHHHCCCe
Confidence 11111 122444444333 2346799999996 999999999999
Q ss_pred EEec------CCchHHHhh-hcceecccchhhHHH
Q 001304 767 VGIS------GREGLQAAR-AADYSIGKFRFLKRL 794 (1104)
Q Consensus 767 Iam~------g~~~~~a~~-~AD~vl~~f~~l~~l 794 (1104)
+++- |+...+... .+|+++.+...+..+
T Consensus 198 ~v~v~~~~~~g~~~~~~~~~~~d~v~~~l~el~~~ 232 (234)
T 3ddh_A 198 GVHIPFEVMWKHEVTETFAHERLKQVKRLDDLLSL 232 (234)
T ss_dssp EEECCCCTTCCCC---CCCCTTEEECSSGGGHHHH
T ss_pred EEEecCCcccccCCcccccCCCceecccHHHHHHh
Confidence 8773 233333334 449999987766543
|
| >2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; 2633731, structural genomics, joint center for structural GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP: c.108.1.20 | Back alignment and structure |
|---|
Probab=97.71 E-value=5.2e-05 Score=80.56 Aligned_cols=137 Identities=12% Similarity=0.180 Sum_probs=87.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++|+.....+..+.. |+... .. ++..+.... ...
T Consensus 77 ~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~l~--~l~~~-~~--v~~~~~~~~--------------------~~~ 131 (236)
T 2fea_A 77 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLE--GIVEK-DR--IYCNHASFD--------------------NDY 131 (236)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHT--TTSCG-GG--EEEEEEECS--------------------SSB
T ss_pred CCCccHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHh--cCCCC-Ce--EEeeeeEEc--------------------CCc
Confidence 689999999999999999999999999888887777 66432 11 222110000 000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
+.... .......+.+-....|..+++.+....+.+++|||+.||+.|.+.|++.++..+
T Consensus 132 ~~~~~--------------------~kp~p~~~~~~~~~~K~~~~~~~~~~~~~~~~vGDs~~Di~~a~~aG~~~~~~~- 190 (236)
T 2fea_A 132 IHIDW--------------------PHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDY- 190 (236)
T ss_dssp CEEEC--------------------TTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEECHH-
T ss_pred eEEec--------------------CCCCccccccccCCcHHHHHHHHhccCCeEEEEeCChHHHHHHHhCCeeeechH-
Confidence 00000 000011111213557888888887667889999999999999999999886522
Q ss_pred chHHHhhh--cceecccchhhHHHH
Q 001304 773 EGLQAARA--ADYSIGKFRFLKRLI 795 (1104)
Q Consensus 773 ~~~~a~~~--AD~vl~~f~~l~~ll 795 (1104)
........ +|+++.++..+..++
T Consensus 191 ~~~~~~~~~~~~~~~~~~~el~~~l 215 (236)
T 2fea_A 191 LLNECREQNLNHLPYQDFYEIRKEI 215 (236)
T ss_dssp HHHHHHHTTCCEECCSSHHHHHHHH
T ss_pred HHHHHHHCCCCeeecCCHHHHHHHH
Confidence 22223332 789888877766543
|
| >3l5k_A Protein GS1, haloacid dehalogenase-like hydrolase domain- containing protein 1A; HDHD1A, haloacid dehalogenase-like hydrolase domain containing 1A; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.71 E-value=1.4e-05 Score=85.75 Aligned_cols=49 Identities=16% Similarity=0.115 Sum_probs=39.0
Q ss_pred CeEEEEcCCccChhhhhhcCc---eEEecCCchHHHhhhcceecccchhhHHH
Q 001304 745 YRTLAIGDGGNDVRMIQKADI---GVGISGREGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 745 ~~v~~iGDG~ND~~ml~~Adv---GIam~g~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
+.+++|||+.||+.|.+.|++ +|++ |+...+.+..||+++.++..+...
T Consensus 191 ~~~i~iGD~~~Di~~a~~aG~~~i~v~~-~~~~~~~~~~ad~v~~sl~el~~~ 242 (250)
T 3l5k_A 191 EKCLVFEDAPNGVEAALAAGMQVVMVPD-GNLSRDLTTKATLVLNSLQDFQPE 242 (250)
T ss_dssp GGEEEEESSHHHHHHHHHTTCEEEECCC-TTSCGGGSTTSSEECSCGGGCCGG
T ss_pred ceEEEEeCCHHHHHHHHHcCCEEEEEcC-CCCchhhcccccEeecCHHHhhHH
Confidence 789999999999999999995 4555 554445667899999988776554
|
| >3dv9_A Beta-phosphoglucomutase; structural genomics, APC60149, PSI- protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.72A {Bacteroides vulgatus} | Back alignment and structure |
|---|
Probab=97.68 E-value=4.2e-05 Score=81.37 Aligned_cols=121 Identities=13% Similarity=0.061 Sum_probs=75.7
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.|++.|+++.++|+.....+...... |+...-..
T Consensus 107 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--------------------------------- 152 (247)
T 3dv9_A 107 AERMPGALEVLTKIKSEGLTPMVVTGSGQTSLLDRLNH-NFPGIFQA--------------------------------- 152 (247)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSCC---CHHHHHH-HSTTTCCG---------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEcCCchHHHHHHHHh-hHHHhcCC---------------------------------
Confidence 46789999999999999999999999887666665555 65321100
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc----Ch--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~----sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
...+++.. .| .--..+.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 153 -----------------------------~~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 203 (247)
T 3dv9_A 153 -----------------------------NLMVTAFDVKYGKPNPEPYLMALKKGGFKPNEALVIENAPLGVQAGVAAGI 203 (247)
T ss_dssp -----------------------------GGEECGGGCSSCTTSSHHHHHHHHHHTCCGGGEEEEECSHHHHHHHHHTTS
T ss_pred -----------------------------CeEEecccCCCCCCCCHHHHHHHHHcCCChhheEEEeCCHHHHHHHHHCCC
Confidence 01111111 11 11123334443345779999999999999999997
Q ss_pred eE-Eec-CCch-HHHhh-hcceecccchhhHHHH
Q 001304 766 GV-GIS-GREG-LQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 GI-am~-g~~~-~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
+. ++. |... .+..+ .||+++.++..+..++
T Consensus 204 ~~i~v~~~~~~~~~l~~~~ad~v~~~~~el~~~l 237 (247)
T 3dv9_A 204 FTIAVNTGPLHDNVLLNEGANLLFHSMPDFNKNW 237 (247)
T ss_dssp EEEEECCSSSCHHHHHTTTCSEEESSHHHHHHHH
T ss_pred eEEEEcCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 64 442 2222 22222 7999999887776553
|
| >3qxg_A Inorganic pyrophosphatase; hydrolase, magnesium binding site, NEW YORK research center for structural genomics; HET: TLA; 1.24A {Bacteroides thetaiotaomicron} PDB: 3qu2_A* 3qx7_A 3quq_A* 3r9k_A 3qut_A 3qu9_A* 3qu7_A 3qu5_A 3qyp_A 3quc_A 3qub_A 3qu4_A | Back alignment and structure |
|---|
Probab=97.64 E-value=4.1e-05 Score=81.59 Aligned_cols=121 Identities=16% Similarity=0.054 Sum_probs=76.5
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.|++.|+++.++|+.....+...... |+...-..
T Consensus 108 ~~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-~l~~~f~~--------------------------------- 153 (243)
T 3qxg_A 108 AERMPGAWELLQKVKSEGLTPMVVTGSGQLSLLERLEH-NFPGMFHK--------------------------------- 153 (243)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECCCCCHHHHTTHHH-HSTTTCCG---------------------------------
T ss_pred CCCCCCHHHHHHHHHHcCCcEEEEeCCcHHHHHHHHHH-hHHHhcCc---------------------------------
Confidence 36789999999999999999999999887666655555 65321100
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc----Ch--hhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV----TP--SQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI 765 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~----sP--~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv 765 (1104)
...+++.- .| +--..+.+.+.-..+.+++|||+.||+.|.+.|++
T Consensus 154 -----------------------------d~i~~~~~~~~~kp~~~~~~~~~~~lg~~~~~~i~vGD~~~Di~~a~~aG~ 204 (243)
T 3qxg_A 154 -----------------------------ELMVTAFDVKYGKPNPEPYLMALKKGGLKADEAVVIENAPLGVEAGHKAGI 204 (243)
T ss_dssp -----------------------------GGEECTTTCSSCTTSSHHHHHHHHHTTCCGGGEEEEECSHHHHHHHHHTTC
T ss_pred -----------------------------ceEEeHHhCCCCCCChHHHHHHHHHcCCCHHHeEEEeCCHHHHHHHHHCCC
Confidence 00111111 11 11122233333234679999999999999999999
Q ss_pred eEEecCCc---hHHHh-hhcceecccchhhHHHH
Q 001304 766 GVGISGRE---GLQAA-RAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 766 GIam~g~~---~~~a~-~~AD~vl~~f~~l~~ll 795 (1104)
+..+-.+. ..+.. ..||+++.++..|..++
T Consensus 205 ~~i~v~~~~~~~~~l~~~~ad~v~~s~~el~~~l 238 (243)
T 3qxg_A 205 FTIAVNTGPLDGQVLLDAGADLLFPSMQTLCDSW 238 (243)
T ss_dssp EEEEECCSSSCHHHHHHTTCSEEESCHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHhcCCCEEECCHHHHHHHH
Confidence 55332322 22222 26999999887776553
|
| >2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii} | Back alignment and structure |
|---|
Probab=97.63 E-value=8.8e-05 Score=78.93 Aligned_cols=117 Identities=12% Similarity=0.153 Sum_probs=77.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+++|+++.++|+.....+..+...+|+. .-. .
T Consensus 110 ~~~~g~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~-~f~---~------------------------------- 154 (240)
T 2hi0_A 110 GPFPGILDLMKNLRQKGVKLAVVSNKPNEAVQVLVEELFPG-SFD---F------------------------------- 154 (240)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHSTT-TCS---E-------------------------------
T ss_pred CcCCCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCc-cee---E-------------------------------
Confidence 35699999999999999999999999888888888888763 211 1
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccC--hhhHHH----HHHHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVT--PSQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~s--P~qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
.+++... ++-|.. +.+.+.-..+.+++|||+.||+.|.+.|++.
T Consensus 155 ------------------------------~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~Di~~a~~aG~~ 204 (240)
T 2hi0_A 155 ------------------------------ALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEIDIQTARNSEMD 204 (240)
T ss_dssp ------------------------------EEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCE
T ss_pred ------------------------------EEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHHHHHHHHHCCCe
Confidence 1111111 111222 2333332346799999999999999999994
Q ss_pred -EEec-CCc-hHHHhh-hcceecccchhhHHH
Q 001304 767 -VGIS-GRE-GLQAAR-AADYSIGKFRFLKRL 794 (1104)
Q Consensus 767 -Iam~-g~~-~~~a~~-~AD~vl~~f~~l~~l 794 (1104)
|++. |.. ..+.+. .||+++.++..+..+
T Consensus 205 ~v~v~~~~~~~~~~~~~~a~~~~~~~~el~~~ 236 (240)
T 2hi0_A 205 EIAVNWGFRSVPFLQKHGATVIVDTAEKLEEA 236 (240)
T ss_dssp EEEESSSSSCHHHHHHTTCCCEECSHHHHHHH
T ss_pred EEEECCCCCchhHHHhcCCCEEECCHHHHHHH
Confidence 3431 332 233443 689999887665443
|
| >1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A | Back alignment and structure |
|---|
Probab=97.62 E-value=3.4e-05 Score=81.40 Aligned_cols=123 Identities=12% Similarity=0.125 Sum_probs=80.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.|+++.++|+.....+..+...+|+...-.. ++..+
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~~~--------------------------- 145 (232)
T 1zrn_A 95 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLSVD--------------------------- 145 (232)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEESG---------------------------
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhcChHhhhhe--EEEec---------------------------
Confidence 5789999999999999999999999998888888888887322110 10000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
..-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++.+...
T Consensus 146 -----------------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~~~~ 196 (232)
T 1zrn_A 146 -----------------------------PVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINR 196 (232)
T ss_dssp -----------------------------GGTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred -----------------------------ccCCCCCCHHHHHHHHHHcCCCcccEEEEeCCHHHHHHHHHcCCEEEEEcC
Confidence 000001112222233344433446799999999999999999999877222
Q ss_pred c---hHHHhhhcceecccchhhHH
Q 001304 773 E---GLQAARAADYSIGKFRFLKR 793 (1104)
Q Consensus 773 ~---~~~a~~~AD~vl~~f~~l~~ 793 (1104)
. ....+..+|+++.+...+..
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~el~~ 220 (232)
T 1zrn_A 197 TGNVFEEMGQTPDWEVTSLRAVVE 220 (232)
T ss_dssp TCCCCCSSSCCCSEEESSHHHHHT
T ss_pred CCCCccccCCCCCEEECCHHHHHH
Confidence 1 12223468999887665543
|
| >2qlt_A (DL)-glycerol-3-phosphatase 1; APC7326, RHR2P, saccharom cerevisiae, structural genomics, PSI-2, protein structure initiative; 1.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.58 E-value=8.1e-05 Score=81.10 Aligned_cols=120 Identities=9% Similarity=-0.022 Sum_probs=77.8
Q ss_pred cCCCChHHHHHHHHHc-CCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKA-GINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~a-GI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.+.+++.+.++.|++. |+++.++|+.....+.......|+...+ . ++.
T Consensus 114 ~~~~g~~~~L~~l~~~~g~~l~i~T~~~~~~~~~~l~~~~l~~f~-~--i~~---------------------------- 162 (275)
T 2qlt_A 114 IEVPGAVKLCNALNALPKEKWAVATSGTRDMAKKWFDILKIKRPE-Y--FIT---------------------------- 162 (275)
T ss_dssp EECTTHHHHHHHHHTSCGGGEEEECSSCHHHHHHHHHHHTCCCCS-S--EEC----------------------------
T ss_pred CcCcCHHHHHHHHHhccCCeEEEEeCCCHHHHHHHHHHcCCCccC-E--EEE----------------------------
Confidence 3579999999999999 9999999999988888888777763211 0 110
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh-------cCCeEEEEcCCccChhhhhhcC
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS-------CDYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~-------~~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
+.. .-...-.|+--..+.+.+.- ..+.+++|||+.||+.|.+.|+
T Consensus 163 -------~~~---------------------~~~~kp~~~~~~~~~~~lgi~~~~~~~~~~~~i~~GDs~nDi~~a~~AG 214 (275)
T 2qlt_A 163 -------AND---------------------VKQGKPHPEPYLKGRNGLGFPINEQDPSKSKVVVFEDAPAGIAAGKAAG 214 (275)
T ss_dssp -------GGG---------------------CSSCTTSSHHHHHHHHHTTCCCCSSCGGGSCEEEEESSHHHHHHHHHTT
T ss_pred -------ccc---------------------CCCCCCChHHHHHHHHHcCCCccccCCCcceEEEEeCCHHHHHHHHHcC
Confidence 000 00000011111223333333 3457999999999999999999
Q ss_pred ceEEe--cCCchHHHhh-hcceecccchhh
Q 001304 765 IGVGI--SGREGLQAAR-AADYSIGKFRFL 791 (1104)
Q Consensus 765 vGIam--~g~~~~~a~~-~AD~vl~~f~~l 791 (1104)
+++.+ .|+...+.++ .||+++.+...+
T Consensus 215 ~~~i~v~~~~~~~~~~~~~ad~v~~~~~el 244 (275)
T 2qlt_A 215 CKIVGIATTFDLDFLKEKGCDIIVKNHESI 244 (275)
T ss_dssp CEEEEESSSSCHHHHTTSSCSEEESSGGGE
T ss_pred CEEEEECCCCCHHHHhhCCCCEEECChHHc
Confidence 87655 2344444455 589999876554
|
| >2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00013 Score=75.85 Aligned_cols=115 Identities=16% Similarity=0.132 Sum_probs=79.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++ |+++.++|+.....+..+.+.+|+...-.
T Consensus 84 ~~~~g~~~~l~~L~~-~~~l~i~T~~~~~~~~~~l~~~gl~~~f~----------------------------------- 127 (210)
T 2ah5_A 84 QLFPQIIDLLEELSS-SYPLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHT-TSCEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred CCCCCHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHHhcCchhhee-----------------------------------
Confidence 467999999999999 99999999998888888888888742211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-Hhc---CCeEEEEcCCccChhhhhhcCc---
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KSC---DYRTLAIGDGGNDVRMIQKADI--- 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~~---~~~v~~iGDG~ND~~ml~~Adv--- 765 (1104)
..++++-.++-|..+.+.+ ++. .+.+++|||+.||+.|.+.|++
T Consensus 128 -----------------------------~i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~Di~~a~~aG~~~i 178 (210)
T 2ah5_A 128 -----------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178 (210)
T ss_dssp -----------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -----------------------------eeecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHHHHHHHHHCCCcEE
Confidence 1222221122344444433 333 3679999999999999999999
Q ss_pred eEEecCCc-hHHHhh-hcceecccchhhHH
Q 001304 766 GVGISGRE-GLQAAR-AADYSIGKFRFLKR 793 (1104)
Q Consensus 766 GIam~g~~-~~~a~~-~AD~vl~~f~~l~~ 793 (1104)
+|++ |.. ..+.+. .+|+++.++..+..
T Consensus 179 ~v~~-~~~~~~~l~~~~a~~v~~~~~el~~ 207 (210)
T 2ah5_A 179 AITW-GFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESS-SSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred EEcC-CCCCHHHHHhCCCCEEECCHHHHHH
Confidence 5555 443 333443 58999988766544
|
| >3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00065 Score=73.39 Aligned_cols=42 Identities=14% Similarity=0.245 Sum_probs=34.9
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcC---CCHhHHHHHHHHcCCCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~ 655 (1104)
+-++++++|++++++|++++++|| +..........++|+...
T Consensus 23 ~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 23 KIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred eCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 345789999999999999999988 777777788888888543
|
| >3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00021 Score=75.37 Aligned_cols=119 Identities=17% Similarity=0.183 Sum_probs=81.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-++.+++.++++.|++. +++.++|+.....+.......|+...-.
T Consensus 102 ~~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~---------------------------------- 146 (238)
T 3ed5_A 102 HQLIDGAFDLISNLQQQ-FDLYIVTNGVSHTQYKRLRDSGLFPFFK---------------------------------- 146 (238)
T ss_dssp CCBCTTHHHHHHHHHTT-SEEEEEECSCHHHHHHHHHHTTCGGGCS----------------------------------
T ss_pred CCCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcChHhhhh----------------------------------
Confidence 35789999999999999 9999999999888888888888732211
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHH-HHHhcC----CeEEEEcCCc-cChhhhhhc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVE-LLKSCD----YRTLAIGDGG-NDVRMIQKA 763 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~-~lk~~~----~~v~~iGDG~-ND~~ml~~A 763 (1104)
..+++...+. -|..+++ .++..| +.+++|||+. ||+.|.+.|
T Consensus 147 ------------------------------~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~vGD~~~~Di~~a~~a 196 (238)
T 3ed5_A 147 ------------------------------DIFVSEDTGFQKPMKEYFNYVFERIPQFSAEHTLIIGDSLTADIKGGQLA 196 (238)
T ss_dssp ------------------------------EEEEGGGTTSCTTCHHHHHHHHHTSTTCCGGGEEEEESCTTTTHHHHHHT
T ss_pred ------------------------------eEEEecccCCCCCChHHHHHHHHHcCCCChhHeEEECCCcHHHHHHHHHC
Confidence 1111111111 1233333 233333 6799999998 999999999
Q ss_pred CceEEecCC--chHHHhhhcceecccchhhHHHH
Q 001304 764 DIGVGISGR--EGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 764 dvGIam~g~--~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+++..+.+. .....+..||+++.++..+..++
T Consensus 197 G~~~i~~~~~~~~~~~~~~ad~v~~~~~el~~~l 230 (238)
T 3ed5_A 197 GLDTCWMNPDMKPNVPEIIPTYEIRKLEELYHIL 230 (238)
T ss_dssp TCEEEEECTTCCCCTTCCCCSEEESSGGGHHHHH
T ss_pred CCEEEEECCCCCCCcccCCCCeEECCHHHHHHHH
Confidence 996533122 22234457899999988887765
|
| >2fdr_A Conserved hypothetical protein; SAD, structural genomics, agrobacter tumefaciens, HAD-superfamily hydrolase; 2.00A {Agrobacterium tumefaciens str} SCOP: c.108.1.6 | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00012 Score=76.66 Aligned_cols=115 Identities=13% Similarity=0.167 Sum_probs=76.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC-CCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE-PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
++.+++.+.++.++. +++++|+.....+..+...+|+...- .. +
T Consensus 87 ~~~~~~~~~l~~l~~---~~~i~s~~~~~~~~~~l~~~~l~~~~~~~--~------------------------------ 131 (229)
T 2fdr_A 87 KIIDGVKFALSRLTT---PRCICSNSSSHRLDMMLTKVGLKPYFAPH--I------------------------------ 131 (229)
T ss_dssp CBCTTHHHHHHHCCS---CEEEEESSCHHHHHHHHHHTTCGGGTTTC--E------------------------------
T ss_pred ccCcCHHHHHHHhCC---CEEEEECCChhHHHHHHHhCChHHhccce--E------------------------------
Confidence 457888888887764 99999999988888888888874211 11 1
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc--Ch--hhHHH----HHHHHHhcCCeEEEEcCCccChhhhhhc
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TP--SQKAQ----LVELLKSCDYRTLAIGDGGNDVRMIQKA 763 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~--sP--~qK~~----iV~~lk~~~~~v~~iGDG~ND~~ml~~A 763 (1104)
++++. .. ..|.. +.+.+.-..+.+++|||+.||++|++.|
T Consensus 132 --------------------------------~~~~~~~~~~~kpk~~~~~~~~~~l~~~~~~~i~iGD~~~Di~~a~~a 179 (229)
T 2fdr_A 132 --------------------------------YSAKDLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAA 179 (229)
T ss_dssp --------------------------------EEHHHHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHT
T ss_pred --------------------------------EeccccccCCCCcCHHHHHHHHHHcCCChhHeEEEcCCHHHHHHHHHC
Confidence 11110 11 12333 3333333446799999999999999999
Q ss_pred Cce-EEecCCchH-------HHhhh-cceecccchhhHHHH
Q 001304 764 DIG-VGISGREGL-------QAARA-ADYSIGKFRFLKRLI 795 (1104)
Q Consensus 764 dvG-Iam~g~~~~-------~a~~~-AD~vl~~f~~l~~ll 795 (1104)
+++ |++ ++... +.++. ||+++.+...+..++
T Consensus 180 G~~~i~~-~~~~~~~~~~~~~l~~~~ad~v~~~~~el~~~l 219 (229)
T 2fdr_A 180 GMRVIGF-TGASHTYPSHADRLTDAGAETVISRMQDLPAVI 219 (229)
T ss_dssp TCEEEEE-CCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred CCEEEEE-ecCCccchhhhHHHhhcCCceeecCHHHHHHHH
Confidence 998 566 33322 35555 999998877765543
|
| >3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0 | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00023 Score=77.02 Aligned_cols=45 Identities=9% Similarity=0.052 Sum_probs=37.0
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcC---CCHhHHHHHHHHcCCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~ 655 (1104)
.+.+-++++++|++++++|++++++|| +..........++|+...
T Consensus 22 ~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 22 SVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp TTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred CCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 444567899999999999999999999 677777777888888543
|
| >3umc_A Haloacid dehalogenase; HY; 2.15A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.50 E-value=6.3e-05 Score=80.46 Aligned_cols=116 Identities=13% Similarity=0.150 Sum_probs=80.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++. +++.++|+.....+..+...+|+. - . .+
T Consensus 120 ~~~~~~~~~l~~l~~~-~~~~i~s~~~~~~~~~~l~~~g~~-f--~--~~------------------------------ 163 (254)
T 3umc_A 120 RPWPDTLAGMHALKAD-YWLAALSNGNTALMLDVARHAGLP-W--D--ML------------------------------ 163 (254)
T ss_dssp EECTTHHHHHHHHTTT-SEEEECCSSCHHHHHHHHHHHTCC-C--S--EE------------------------------
T ss_pred CCCccHHHHHHHHHhc-CeEEEEeCCCHHHHHHHHHHcCCC-c--c--eE------------------------------
Confidence 4678999999999985 999999999988888888888873 1 1 00
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc--ChhhHHHHH----HHHHhcCCeEEEEcCCccChhhhhhcCce
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV--TPSQKAQLV----ELLKSCDYRTLAIGDGGNDVRMIQKADIG 766 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~--sP~qK~~iV----~~lk~~~~~v~~iGDG~ND~~ml~~AdvG 766 (1104)
++++. ..+-|..++ +.+.-..+.+++|||+.||+.|.+.|+++
T Consensus 164 -------------------------------~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~ 212 (254)
T 3umc_A 164 -------------------------------LCADLFGHYKPDPQVYLGACRLLDLPPQEVMLCAAHNYDLKAARALGLK 212 (254)
T ss_dssp -------------------------------CCHHHHTCCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCE
T ss_pred -------------------------------EeecccccCCCCHHHHHHHHHHcCCChHHEEEEcCchHhHHHHHHCCCe
Confidence 00000 111233333 33332447799999999999999999999
Q ss_pred EEecCC---chH----HH--hhhcceecccchhhHHHH
Q 001304 767 VGISGR---EGL----QA--ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 767 Iam~g~---~~~----~a--~~~AD~vl~~f~~l~~ll 795 (1104)
++|... .+. +. +..||+++.++..|..++
T Consensus 213 ~~~~~~~~~~g~~~~~~l~~~~~ad~v~~~l~el~~~l 250 (254)
T 3umc_A 213 TAFIARPLEYGPGQSQDLAAEQDWDLIASDLLDLHRQL 250 (254)
T ss_dssp EEEECCTTTTCTTCCSSSSCSSCCSEEESSHHHHHHHH
T ss_pred EEEEecCCccCCCCCcccccCCCCcEEECCHHHHHHHh
Confidence 988321 121 12 457899999987776654
|
| >3umg_A Haloacid dehalogenase; defluorinase, hydrolase; 2.25A {Rhodococcus jostii} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00017 Score=76.84 Aligned_cols=119 Identities=10% Similarity=0.062 Sum_probs=81.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++. +++.++|+.....+..+...+|+. -+. ++ ..+
T Consensus 116 ~~~~~~~~~l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~~~-f~~---~~-----~~~---------------------- 163 (254)
T 3umg_A 116 TPWPDSVPGLTAIKAE-YIIGPLSNGNTSLLLDMAKNAGIP-WDV---II-----GSD---------------------- 163 (254)
T ss_dssp CBCTTHHHHHHHHHHH-SEEEECSSSCHHHHHHHHHHHTCC-CSC---CC-----CHH----------------------
T ss_pred cCCcCHHHHHHHHHhC-CeEEEEeCCCHHHHHHHHHhCCCC-eeE---EE-----EcC----------------------
Confidence 5679999999999997 999999999988888888888873 110 00 000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH-Hh---cCCeEEEEcCCccChhhhhhcCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL-KS---CDYRTLAIGDGGNDVRMIQKADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l-k~---~~~~v~~iGDG~ND~~ml~~AdvGIa 768 (1104)
......| |..+++.+ +. ..+.+++|||+.||+.|.+.|+++++
T Consensus 164 -------------------------------~~~~~kp--~~~~~~~~~~~lgi~~~~~~~iGD~~~Di~~a~~aG~~~~ 210 (254)
T 3umg_A 164 -------------------------------INRKYKP--DPQAYLRTAQVLGLHPGEVMLAAAHNGDLEAAHATGLATA 210 (254)
T ss_dssp -------------------------------HHTCCTT--SHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHTTCEEE
T ss_pred -------------------------------cCCCCCC--CHHHHHHHHHHcCCChHHEEEEeCChHhHHHHHHCCCEEE
Confidence 0001112 22333322 22 34679999999999999999999998
Q ss_pred ecCCc---hH----H--HhhhcceecccchhhHHHHH
Q 001304 769 ISGRE---GL----Q--AARAADYSIGKFRFLKRLIL 796 (1104)
Q Consensus 769 m~g~~---~~----~--a~~~AD~vl~~f~~l~~lll 796 (1104)
|.... +. + .+..+|+++.++..+..++.
T Consensus 211 ~~~~~~~~g~~~~~~~~~~~~~d~~~~~~~el~~~l~ 247 (254)
T 3umg_A 211 FILRPVEHGPHQTDDLAPTGSWDISATDITDLAAQLR 247 (254)
T ss_dssp EECCTTTTCTTCCSCSSCSSCCSEEESSHHHHHHHHH
T ss_pred EEecCCcCCCCccccccccCCCceEECCHHHHHHHhc
Confidence 83321 11 1 24578999999888877653
|
| >2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00019 Score=72.86 Aligned_cols=105 Identities=16% Similarity=0.203 Sum_probs=66.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.+.++.|++.|++++++|+... .+.......|+...-
T Consensus 83 ~~~~~~~~l~~l~~~g~~~~i~t~~~~-~~~~~l~~~~~~~~f------------------------------------- 124 (190)
T 2fi1_A 83 LFEGVSDLLEDISNQGGRHFLVSHRND-QVLEILEKTSIAAYF------------------------------------- 124 (190)
T ss_dssp BCTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHTTCGGGE-------------------------------------
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCcH-HHHHHHHHcCCHhhe-------------------------------------
Confidence 679999999999999999999998764 456666666652110
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHH-HHhcCC-eEEEEcCCccChhhhhhcCceEEecC
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVEL-LKSCDY-RTLAIGDGGNDVRMIQKADIGVGISG 771 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~-lk~~~~-~v~~iGDG~ND~~ml~~AdvGIam~g 771 (1104)
..++.+. . +....| |...++. +++.|- .+++|||+.||++|.+.|++++++ .
T Consensus 125 ~~~~~~~----------------------~-~~~~kp--~~~~~~~~~~~~~~~~~~~iGD~~~Di~~a~~aG~~~~~-~ 178 (190)
T 2fi1_A 125 TEVVTSS----------------------S-GFKRKP--NPESMLYLREKYQISSGLVIGDRPIDIEAGQAAGLDTHL-F 178 (190)
T ss_dssp EEEECGG----------------------G-CCCCTT--SCHHHHHHHHHTTCSSEEEEESSHHHHHHHHHTTCEEEE-C
T ss_pred eeeeecc----------------------c-cCCCCC--CHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCeEEE-E
Confidence 0000000 0 001111 2222222 222221 799999999999999999999887 4
Q ss_pred CchHHHhhhcc
Q 001304 772 REGLQAARAAD 782 (1104)
Q Consensus 772 ~~~~~a~~~AD 782 (1104)
+.+.+.++..+
T Consensus 179 ~~~~~~~~~l~ 189 (190)
T 2fi1_A 179 TSIVNLRQVLD 189 (190)
T ss_dssp SCHHHHHHHHT
T ss_pred CCCCChhhccC
Confidence 55655555544
|
| >2w43_A Hypothetical 2-haloalkanoic acid dehalogenase; hydrolase, metabolic process; HET: MES; 1.66A {Sulfolobus tokodaii} PDB: 2w11_A | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00016 Score=74.33 Aligned_cols=120 Identities=10% Similarity=0.075 Sum_probs=78.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+ ++.|++. +++.++|+.....+..+...+|+...-.. ++.
T Consensus 74 ~~~~~~~~-l~~l~~~-~~~~i~t~~~~~~~~~~l~~~~l~~~f~~--~~~----------------------------- 120 (201)
T 2w43_A 74 KAYEDTKY-LKEISEI-AEVYALSNGSINEVKQHLERNGLLRYFKG--IFS----------------------------- 120 (201)
T ss_dssp EECGGGGG-HHHHHHH-SEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEE-----------------------------
T ss_pred ccCCChHH-HHHHHhC-CeEEEEeCcCHHHHHHHHHHCCcHHhCcE--EEe-----------------------------
Confidence 56799999 9999999 99999999998888888888887322110 100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
+. ..-...-.|+--..+.+.+. .+.+++|||+.||+.|.+.|++++.+-..
T Consensus 121 ------~~---------------------~~~~~Kp~~~~~~~~~~~~~--~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 171 (201)
T 2w43_A 121 ------AE---------------------SVKEYKPSPKVYKYFLDSIG--AKEAFLVSSNAFDVIGAKNAGMRSIFVNR 171 (201)
T ss_dssp ------GG---------------------GGTCCTTCHHHHHHHHHHHT--CSCCEEEESCHHHHHHHHHTTCEEEEECS
T ss_pred ------hh---------------------hcCCCCCCHHHHHHHHHhcC--CCcEEEEeCCHHHhHHHHHCCCEEEEECC
Confidence 00 00000011222223444444 56799999999999999999999766222
Q ss_pred ---chHHHhhhcceecccchhhHHH
Q 001304 773 ---EGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 773 ---~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
........+|+++.++..+..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~el~~~ 196 (201)
T 2w43_A 172 KNTIVDPIGGKPDVIVNDFKELYEW 196 (201)
T ss_dssp SSCCCCTTSCCCSEEESSHHHHHHH
T ss_pred CCCCccccCCCCCEEECCHHHHHHH
Confidence 1112233689998887666554
|
| >3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00016 Score=78.11 Aligned_cols=123 Identities=11% Similarity=0.051 Sum_probs=80.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++.|+++.++|+.... +..+...+|+...-.. ++.
T Consensus 106 ~~~~~~~~~l~~l~~~g~~~~i~tn~~~~-~~~~l~~~gl~~~f~~--~~~----------------------------- 153 (263)
T 3k1z_A 106 QVLDGAEDTLRECRTRGLRLAVISNFDRR-LEGILGGLGLREHFDF--VLT----------------------------- 153 (263)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESCCTT-HHHHHHHTTCGGGCSC--EEE-----------------------------
T ss_pred eECcCHHHHHHHHHhCCCcEEEEeCCcHH-HHHHHHhCCcHHhhhE--EEe-----------------------------
Confidence 46799999999999999999999987654 5777778887332111 100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCceEEecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvGIam~g 771 (1104)
+. ..-...-.|.--..+.+.+.-..+.+++|||+. ||+.|.+.|++++.+.
T Consensus 154 ------~~---------------------~~~~~Kp~~~~~~~~~~~~g~~~~~~~~vGD~~~~Di~~a~~aG~~~i~~- 205 (263)
T 3k1z_A 154 ------SE---------------------AAGWPKPDPRIFQEALRLAHMEPVVAAHVGDNYLCDYQGPRAVGMHSFLV- 205 (263)
T ss_dssp ------HH---------------------HHSSCTTSHHHHHHHHHHHTCCGGGEEEEESCHHHHTHHHHTTTCEEEEE-
T ss_pred ------ec---------------------ccCCCCCCHHHHHHHHHHcCCCHHHEEEECCCcHHHHHHHHHCCCEEEEE-
Confidence 00 000011122222334444443457899999997 9999999999999883
Q ss_pred CchHHH------hhhcceecccchhhHHHH
Q 001304 772 REGLQA------ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 772 ~~~~~a------~~~AD~vl~~f~~l~~ll 795 (1104)
+.+... ...+|+++.+...+..++
T Consensus 206 ~~~~~~~~~~~~~~~ad~v~~~l~el~~~l 235 (263)
T 3k1z_A 206 VGPQALDPVVRDSVPKEHILPSLAHLLPAL 235 (263)
T ss_dssp CCSSCCCHHHHHHSCGGGEESSGGGHHHHH
T ss_pred cCCCCCchhhcccCCCceEeCCHHHHHHHH
Confidence 222111 126899999988877665
|
| >1qq5_A Protein (L-2-haloacid dehalogenase); hydrolase; 1.52A {Xanthobacter autotrophicus} SCOP: c.108.1.1 PDB: 1qq6_A* 1qq7_A* 1aq6_A | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00016 Score=77.60 Aligned_cols=123 Identities=16% Similarity=0.173 Sum_probs=80.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+ |+++.++|+.....+..+...+|+...-.. ++..+
T Consensus 93 ~~~~~~~~~l~~l~--g~~~~i~t~~~~~~~~~~l~~~gl~~~f~~--~~~~~--------------------------- 141 (253)
T 1qq5_A 93 TPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTDSFDA--VISVD--------------------------- 141 (253)
T ss_dssp CBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEEGG---------------------------
T ss_pred CCCccHHHHHHHHc--CCCEEEEeCcCHHHHHHHHHHCCchhhccE--EEEcc---------------------------
Confidence 67899999999999 999999999999888888888887322110 11000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
..-...-.|.--..+.+.+.-..+.+++|||+.||+.|.+.|++++.+...
T Consensus 142 -----------------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~a~~aG~~~~~~~~ 192 (253)
T 1qq5_A 142 -----------------------------AKRVFKPHPDSYALVEEVLGVTPAEVLFVSSNGFDVGGAKNFGFSVARVAR 192 (253)
T ss_dssp -----------------------------GGTCCTTSHHHHHHHHHHHCCCGGGEEEEESCHHHHHHHHHHTCEEEEECC
T ss_pred -----------------------------ccCCCCCCHHHHHHHHHHcCCCHHHEEEEeCChhhHHHHHHCCCEEEEECC
Confidence 000001111112223333333346799999999999999999999877332
Q ss_pred c----------------------h----HHHhhhcceecccchhhHHHH
Q 001304 773 E----------------------G----LQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 773 ~----------------------~----~~a~~~AD~vl~~f~~l~~ll 795 (1104)
. + ...+..+|+++.++..+..++
T Consensus 193 ~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~l 241 (253)
T 1qq5_A 193 LSQEALARELVSGTIAPLTMFKALRMREETYAEAPDFVVPALGDLPRLV 241 (253)
T ss_dssp SCHHHHHHHTTSSSCCHHHHHHHHHSSCCTTSCCCSEEESSGGGHHHHH
T ss_pred cccchhhhhcccccccccccccccccccCCCCCCCCeeeCCHHHHHHHH
Confidence 0 1 112336899998887776654
|
| >2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00088 Score=71.46 Aligned_cols=117 Identities=13% Similarity=0.024 Sum_probs=76.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+ .|+++.++|+.....+.......|+...-..
T Consensus 112 ~~~~~~~~~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~~l~~~f~~---------------------------------- 156 (251)
T 2pke_A 112 EVIAGVREAVAAIA-ADYAVVLITKGDLFHQEQKIEQSGLSDLFPR---------------------------------- 156 (251)
T ss_dssp CBCTTHHHHHHHHH-TTSEEEEEEESCHHHHHHHHHHHSGGGTCCC----------------------------------
T ss_pred CcCccHHHHHHHHH-CCCEEEEEeCCCHHHHHHHHHHcCcHHhCce----------------------------------
Confidence 56899999999999 9999999999988877777777776322111
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccCh--hhHHHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCceEEe
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTP--SQKAQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP--~qK~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvGIam 769 (1104)
+++.-.| .--..+.+.+.-..+.+++|||+. ||+.|.+.|++++++
T Consensus 157 -------------------------------i~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di~~a~~aG~~~~~ 205 (251)
T 2pke_A 157 -------------------------------IEVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDVEPVLAIGGWGIY 205 (251)
T ss_dssp -------------------------------EEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCCHHHHHTTCEEEE
T ss_pred -------------------------------eeeeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhHHHHHHCCCEEEE
Confidence 1111112 111223333333457899999999 999999999999866
Q ss_pred cCCchH------H-H-hhhcce-ecccchhhHHHH
Q 001304 770 SGREGL------Q-A-ARAADY-SIGKFRFLKRLI 795 (1104)
Q Consensus 770 ~g~~~~------~-a-~~~AD~-vl~~f~~l~~ll 795 (1104)
-..... + . ...+|+ ++.++..+..++
T Consensus 206 v~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~l 240 (251)
T 2pke_A 206 TPYAVTWAHEQDHGVAADEPRLREVPDPSGWPAAV 240 (251)
T ss_dssp CCCC-------------CCTTEEECSSGGGHHHHH
T ss_pred ECCCCccccccccccccCCCCeeeeCCHHHHHHHH
Confidence 322111 1 1 235787 888877765543
|
| >2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.00063 Score=70.81 Aligned_cols=59 Identities=22% Similarity=0.280 Sum_probs=39.4
Q ss_pred HHHHHhcCCeEEEEcCCccChhhhhhcCce--EEec-CCchHHH-hhhcceecccchhhHHHH
Q 001304 737 VELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGIS-GREGLQA-ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 737 V~~lk~~~~~v~~iGDG~ND~~ml~~AdvG--Iam~-g~~~~~a-~~~AD~vl~~f~~l~~ll 795 (1104)
.+.+.-..+.+++|||+.||+.|.+.|++. |++. |....+. ...+|+++.++..+..++
T Consensus 141 ~~~lgi~~~~~~~VGD~~~Di~~a~~aG~~~~i~v~~g~~~~~~~~~~~d~vi~~l~el~~~l 203 (211)
T 2gmw_A 141 RDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 203 (211)
T ss_dssp HHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred HHHcCCCHHHEEEEcCCHHHHHHHHHCCCceEEEEecCCCccccccCCCCEEeCCHHHHHHHH
Confidence 333433446799999999999999999965 4441 3222222 236899998877766543
|
| >3smv_A S-(-)-azetidine-2-carboxylate hydrolase; haloacid dehalogenase superfamily, L-azetidine-2- carboxylate; HET: GOL; 1.38A {Pseudomonas} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00024 Score=74.80 Aligned_cols=122 Identities=11% Similarity=0.067 Sum_probs=78.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++ |+++.++|+.....+......++- .-. .+
T Consensus 99 ~~~~~~~~~l~~l~~-~~~~~i~tn~~~~~~~~~l~~l~~---~fd--~i------------------------------ 142 (240)
T 3smv_A 99 PAFPDTVEALQYLKK-HYKLVILSNIDRNEFKLSNAKLGV---EFD--HI------------------------------ 142 (240)
T ss_dssp CBCTTHHHHHHHHHH-HSEEEEEESSCHHHHHHHHTTTCS---CCS--EE------------------------------
T ss_pred CCCCcHHHHHHHHHh-CCeEEEEeCCChhHHHHHHHhcCC---ccC--EE------------------------------
Confidence 678999999999999 899999999988776666554331 000 00
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh---cCCeEEEEcCCc-cChhhhhhcCceEE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS---CDYRTLAIGDGG-NDVRMIQKADIGVG 768 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~---~~~~v~~iGDG~-ND~~ml~~AdvGIa 768 (1104)
+.+.. .....-.|.-...+++.++. ..+.+++|||+. ||+.|.+.|+++++
T Consensus 143 ----~~~~~---------------------~~~~KP~~~~~~~~l~~~~~lgi~~~~~~~vGD~~~~Di~~a~~aG~~~~ 197 (240)
T 3smv_A 143 ----ITAQD---------------------VGSYKPNPNNFTYMIDALAKAGIEKKDILHTAESLYHDHIPANDAGLVSA 197 (240)
T ss_dssp ----EEHHH---------------------HTSCTTSHHHHHHHHHHHHHTTCCGGGEEEEESCTTTTHHHHHHHTCEEE
T ss_pred ----EEccc---------------------cCCCCCCHHHHHHHHHHHHhcCCCchhEEEECCCchhhhHHHHHcCCeEE
Confidence 00000 00011233333344333433 346799999996 99999999999998
Q ss_pred ecCCc---------hHHH-hhhcceecccchhhHHHH
Q 001304 769 ISGRE---------GLQA-ARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 769 m~g~~---------~~~a-~~~AD~vl~~f~~l~~ll 795 (1104)
+.... .... ...||+++.+...+..++
T Consensus 198 ~~~~~~~~~g~g~~~~~~~~~~ad~v~~~~~el~~~l 234 (240)
T 3smv_A 198 WIYRRHGKEGYGATHVPSRMPNVDFRFNSMGEMAEAH 234 (240)
T ss_dssp EECTTCC-------CCCSSCCCCSEEESSHHHHHHHH
T ss_pred EEcCCCcccCCCCCCCCcCCCCCCEEeCCHHHHHHHH
Confidence 83221 1122 357899999877776654
|
| >2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00035 Score=71.14 Aligned_cols=41 Identities=22% Similarity=0.232 Sum_probs=37.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCC-HhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDK-QNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~-~~ta~~ia~~~gi~ 653 (1104)
++.+++.++|+.|+++|++++++||.. ...+..+.+.+|+.
T Consensus 68 ~~~~g~~e~L~~L~~~G~~v~ivT~~~~~~~~~~~l~~~gl~ 109 (187)
T 2wm8_A 68 RLYPEVPEVLKRLQSLGVPGAAASRTSEIEGANQLLELFDLF 109 (187)
T ss_dssp CCCTTHHHHHHHHHHHTCCEEEEECCSCHHHHHHHHHHTTCT
T ss_pred CcchhHHHHHHHHHHCCceEEEEeCCCChHHHHHHHHHcCcH
Confidence 578999999999999999999999998 78888899998874
|
| >2x4d_A HLHPP, phospholysine phosphohistidine inorganic pyrophos phosphatase; hydrolase; 1.92A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.25 E-value=0.0031 Score=67.75 Aligned_cols=41 Identities=12% Similarity=0.160 Sum_probs=36.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~~ 654 (1104)
+-+++.++++.+++.|+++.++| |+..........+.|+..
T Consensus 33 ~~~~~~~a~~~l~~~G~~~~~~t~~~gr~~~~~~~~l~~~g~~~ 76 (271)
T 2x4d_A 33 AIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGFDI 76 (271)
T ss_dssp ECTTHHHHHHHHHHSSSEEEEECCCCSSCHHHHHHHHHHTTCCC
T ss_pred cCcCHHHHHHHHHHCCCcEEEEECCCCCCHHHHHHHHHHCCCCC
Confidence 66889999999999999999999 999998888888888743
|
| >3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0023 Score=69.04 Aligned_cols=42 Identities=21% Similarity=0.367 Sum_probs=37.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~~~ 655 (1104)
.+ ++++++|++++++|++++++| |+..........++|+...
T Consensus 22 ~i-~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 22 RI-PAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EC-HHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EC-cCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 45 799999999999999999999 8888888888889998543
|
| >1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A* | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0067 Score=65.38 Aligned_cols=43 Identities=21% Similarity=0.194 Sum_probs=38.2
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~~ 654 (1104)
+++-+++.++|+.++++|++++++| |+.........+++|+..
T Consensus 32 ~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 32 DSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp TEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred CEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 5677899999999999999999999 899888888888988743
|
| >3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.0012 Score=67.18 Aligned_cols=129 Identities=11% Similarity=0.104 Sum_probs=80.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCH---hHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQ---NTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSE 689 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~---~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 689 (1104)
++.+++.++++.|+++|+++.++|+... ..+..+...+|+...-.. ++. .+...
T Consensus 34 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~~~gl~~~fd~--i~~-~~~~~-------------------- 90 (189)
T 3ib6_A 34 VLRKNAKETLEKVKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDF--IYA-SNSEL-------------------- 90 (189)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHTTCGGGEEE--EEE-CCTTS--------------------
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEECCCccchHHHHHHHHhcCchhheEE--EEE-ccccc--------------------
Confidence 5889999999999999999999998876 788888888887321100 000 00000
Q ss_pred CCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCC-ccChhhhhhcCceEE
Q 001304 690 PKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGVG 768 (1104)
Q Consensus 690 ~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG-~ND~~ml~~AdvGIa 768 (1104)
...-+..-.|+--..+.+.+.-....+++|||+ .+|+.+-+.|++...
T Consensus 91 -------------------------------~~~~~~KP~p~~~~~~~~~~~~~~~~~l~VGD~~~~Di~~A~~aG~~~i 139 (189)
T 3ib6_A 91 -------------------------------QPGKMEKPDKTIFDFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAI 139 (189)
T ss_dssp -------------------------------STTCCCTTSHHHHHHHHHHHTCCGGGEEEEESBTTTTHHHHHHTTCEEE
T ss_pred -------------------------------cccCCCCcCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHCCCeEE
Confidence 000001112222233344443345789999999 799999999999764
Q ss_pred ecCCchH-----HHhh-hcceecc--cchhhHHHH
Q 001304 769 ISGREGL-----QAAR-AADYSIG--KFRFLKRLI 795 (1104)
Q Consensus 769 m~g~~~~-----~a~~-~AD~vl~--~f~~l~~ll 795 (1104)
.-.+... .... .+|+++. +...+..++
T Consensus 140 ~v~~~~~~~~~~~~~~~~~~~v~~~~~l~~l~~~l 174 (189)
T 3ib6_A 140 WLQNPEVCLQDERLPLVAPPFVIPVWDLADVPEAL 174 (189)
T ss_dssp EECCTTTCBCSSCCCBCSSSCEEEESSGGGHHHHH
T ss_pred EECCccccccccccccCCCcceeccccHHhHHHHH
Confidence 3222221 1111 6799998 777776664
|
| >2o2x_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; 1.50A {Mesorhizobium loti} SCOP: c.108.1.19 | Back alignment and structure |
|---|
Probab=96.85 E-value=0.00099 Score=69.64 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=26.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
.++.+++.++|+.|+++|+++.++|+...
T Consensus 55 ~~~~~g~~e~L~~L~~~G~~~~i~Tn~~~ 83 (218)
T 2o2x_A 55 IVLRPQMLPAIATANRAGIPVVVVTNQSG 83 (218)
T ss_dssp CCBCGGGHHHHHHHHHHTCCEEEEEECHH
T ss_pred CeECcCHHHHHHHHHHCCCEEEEEcCcCC
Confidence 46789999999999999999999999987
|
| >3cnh_A Hydrolase family protein; NP_295428.1, predicted hydrolase of haloacid dehalogenase-LI superfamily; HET: MSE PG4; 1.66A {Deinococcus radiodurans R1} | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0013 Score=67.31 Aligned_cols=98 Identities=7% Similarity=-0.011 Sum_probs=66.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.|++.| +++++|+.....+..+...+|+...-.. ++.
T Consensus 86 ~~~~~~~~~l~~l~~~g-~~~i~s~~~~~~~~~~l~~~~~~~~f~~--~~~----------------------------- 133 (200)
T 3cnh_A 86 QPRPEVLALARDLGQRY-RMYSLNNEGRDLNEYRIRTFGLGEFLLA--FFT----------------------------- 133 (200)
T ss_dssp CBCHHHHHHHHHHTTTS-EEEEEECCCHHHHHHHHHHHTGGGTCSC--EEE-----------------------------
T ss_pred ccCccHHHHHHHHHHcC-CEEEEeCCcHHHHHHHHHhCCHHHhcce--EEe-----------------------------
Confidence 36799999999999999 9999999998888888888886432111 110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEe
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam 769 (1104)
+. ..-...-.|+--..+++.+.-..+.+++|||+.||+.|.+.|++.+.+
T Consensus 134 ------~~---------------------~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~ 183 (200)
T 3cnh_A 134 ------SS---------------------ALGVMKPNPAMYRLGLTLAQVRPEEAVMVDDRLQNVQAARAVGMHAVQ 183 (200)
T ss_dssp ------HH---------------------HHSCCTTCHHHHHHHHHHHTCCGGGEEEEESCHHHHHHHHHTTCEEEE
T ss_pred ------ec---------------------ccCCCCCCHHHHHHHHHHcCCCHHHeEEeCCCHHHHHHHHHCCCEEEE
Confidence 00 000001122222233444433456799999999999999999999877
|
| >2i6x_A Hydrolase, haloacid dehalogenase-like family; HAD superfamily, struct genomics, PSI-2, protein structure initiative; HET: MSE; 2.40A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0003 Score=72.79 Aligned_cols=36 Identities=11% Similarity=0.162 Sum_probs=30.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS 649 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~ 649 (1104)
++.+++.++++.|++ |++++++|+.....+..+...
T Consensus 89 ~~~~~~~~~l~~l~~-g~~~~i~t~~~~~~~~~~~~~ 124 (211)
T 2i6x_A 89 EISAEKFDYIDSLRP-DYRLFLLSNTNPYVLDLAMSP 124 (211)
T ss_dssp EECHHHHHHHHHHTT-TSEEEEEECCCHHHHHHHTST
T ss_pred ccChHHHHHHHHHHc-CCeEEEEeCCCHHHHHHHHhh
Confidence 467899999999999 999999999887776666555
|
| >3vay_A HAD-superfamily hydrolase; rossmann fold, haloacid dehalogenase; 1.98A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0016 Score=68.10 Aligned_cols=59 Identities=19% Similarity=0.195 Sum_probs=41.8
Q ss_pred HHHHHhcCCeEEEEcCCc-cChhhhhhcCceEEecC--CchHHHhhhcceecccchhhHHHH
Q 001304 737 VELLKSCDYRTLAIGDGG-NDVRMIQKADIGVGISG--REGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 737 V~~lk~~~~~v~~iGDG~-ND~~ml~~AdvGIam~g--~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
.+.+.-..+.+++|||+. ||+.|.+.|++++.+-. ....+....+|+++.++..+..++
T Consensus 165 ~~~~~~~~~~~~~vGD~~~~Di~~a~~aG~~~~~v~~~~~~~~~~~~~~~~~~~l~el~~~l 226 (230)
T 3vay_A 165 LRRAKVDASAAVHVGDHPSDDIAGAQQAGMRAIWYNPQGKAWDADRLPDAEIHNLSQLPEVL 226 (230)
T ss_dssp HHHHTCCGGGEEEEESCTTTTHHHHHHTTCEEEEECTTCCCCCSSSCCSEEESSGGGHHHHH
T ss_pred HHHhCCCchheEEEeCChHHHHHHHHHCCCEEEEEcCCCCCCcccCCCCeeECCHHHHHHHH
Confidence 333333457899999998 99999999999987622 211112447899999988876654
|
| >3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0037 Score=64.75 Aligned_cols=41 Identities=20% Similarity=0.258 Sum_probs=37.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++.+++.++++.|++.|+++.++|+.....+....+.+|+.
T Consensus 84 ~~~pg~~~~l~~L~~~g~~~~i~tn~~~~~~~~~l~~~~l~ 124 (216)
T 3kbb_A 84 KENPGVREALEFVKSKRIKLALATSTPQREALERLRRLDLE 124 (216)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCG
T ss_pred ccCccHHHHHHHHHHcCCCcccccCCcHHHHHHHHHhcCCC
Confidence 46799999999999999999999999999999999999884
|
| >2gfh_A Haloacid dehalogenase-like hydrolase domain conta; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.90A {Mus musculus} SCOP: c.108.1.6 PDB: 2w4m_A | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0033 Score=67.60 Aligned_cols=117 Identities=21% Similarity=0.211 Sum_probs=78.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|++ |+++.++|+.....+..+...+|+...-.
T Consensus 121 ~~~~g~~~~L~~L~~-~~~l~i~Tn~~~~~~~~~l~~~gl~~~f~----------------------------------- 164 (260)
T 2gfh_A 121 ILADDVKAMLTELRK-EVRLLLLTNGDRQTQREKIEACACQSYFD----------------------------------- 164 (260)
T ss_dssp CCCHHHHHHHHHHHT-TSEEEEEECSCHHHHHHHHHHHTCGGGCS-----------------------------------
T ss_pred CCCcCHHHHHHHHHc-CCcEEEEECcChHHHHHHHHhcCHHhhhh-----------------------------------
Confidence 577999999999998 59999999999888888888888732211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc------ChhhHHHHHHHHHhcCCeEEEEcCC-ccChhhhhhcCc
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV------TPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADI 765 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~------sP~qK~~iV~~lk~~~~~v~~iGDG-~ND~~ml~~Adv 765 (1104)
..+++.- .|+--..+.+.+.-..+.+++|||+ .||+.+-+.|++
T Consensus 165 -----------------------------~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~vGDs~~~Di~~A~~aG~ 215 (260)
T 2gfh_A 165 -----------------------------AIVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGL 215 (260)
T ss_dssp -----------------------------EEEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTC
T ss_pred -----------------------------eEEecCCCCCCCCCHHHHHHHHHHcCCChhhEEEECCCchhhHHHHHHCCC
Confidence 1111111 1221222333333344679999995 999999999999
Q ss_pred --eEEecCCchH--HHhhhcceecccchhhHHH
Q 001304 766 --GVGISGREGL--QAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 766 --GIam~g~~~~--~a~~~AD~vl~~f~~l~~l 794 (1104)
+|++.+.... .....+|+++.+...+..+
T Consensus 216 ~~~i~v~~~~~~~~~~~~~~~~~i~~~~el~~~ 248 (260)
T 2gfh_A 216 KATVWINKSGRVPLTSSPMPHYMVSSVLELPAL 248 (260)
T ss_dssp SEEEEECTTCCCCSSCCCCCSEEESSGGGHHHH
T ss_pred ceEEEEcCCCCCcCcccCCCCEEECCHHHHHHH
Confidence 5777322111 1223689998887766554
|
| >2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2 | Back alignment and structure |
|---|
Probab=96.46 E-value=0.00041 Score=71.40 Aligned_cols=39 Identities=8% Similarity=0.091 Sum_probs=29.3
Q ss_pred HHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCCch
Q 001304 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREG 774 (1104)
Q Consensus 735 ~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~ 774 (1104)
.+.+.+.-..+.+++|||+.||+.|.+.|+++..+ .+.+
T Consensus 156 ~~~~~~~~~~~~~~~vgD~~~Di~~a~~aG~~~~~-~~~~ 194 (206)
T 2b0c_A 156 HVLQAEGFSPSDTVFFDDNADNIEGANQLGITSIL-VKDK 194 (206)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHTTTCEEEE-CCST
T ss_pred HHHHHcCCCHHHeEEeCCCHHHHHHHHHcCCeEEE-ecCC
Confidence 34444443456899999999999999999998876 3444
|
| >2c4n_A Protein NAGD; nucleotide phosphatase, HAD superfamily, UMP phosphatase, carbohydrate metabolism, hydrolase; 1.8A {Escherichia coli} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0016 Score=68.94 Aligned_cols=60 Identities=12% Similarity=0.090 Sum_probs=40.9
Q ss_pred hHHHHHHHHHh----cCCeEEEEcCC-ccChhhhhhcCceEEe--cCCch-HHHh---hhcceecccchhh
Q 001304 732 QKAQLVELLKS----CDYRTLAIGDG-GNDVRMIQKADIGVGI--SGREG-LQAA---RAADYSIGKFRFL 791 (1104)
Q Consensus 732 qK~~iV~~lk~----~~~~v~~iGDG-~ND~~ml~~AdvGIam--~g~~~-~~a~---~~AD~vl~~f~~l 791 (1104)
.|...++.+.+ ..+.+++|||+ .||+.|++.|++++++ .|+.. .+.+ ..+|+++.+...+
T Consensus 177 pk~~~~~~~~~~lgi~~~~~i~iGD~~~nDi~~~~~aG~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~el 247 (250)
T 2c4n_A 177 PSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGLETILVLSGVSSLDDIDSMPFRPSWIYPSVAEI 247 (250)
T ss_dssp TSTHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCEEEEESSSSCCGGGGSSCSSCCSEEESSGGGC
T ss_pred CCHHHHHHHHHHcCCCcceEEEECCCchhHHHHHHHcCCeEEEECCCCCChhhhhhcCCCCCEEECCHHHh
Confidence 35555554443 34689999999 7999999999999654 24433 2333 3689998876544
|
| >2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=96.28 E-value=0.012 Score=60.08 Aligned_cols=35 Identities=17% Similarity=0.308 Sum_probs=30.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIA 647 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia 647 (1104)
++.+++.++++.|+++|+++.++||.....+..+.
T Consensus 36 ~~~pg~~e~L~~L~~~g~~~~i~T~~~~~~~~~~~ 70 (196)
T 2oda_A 36 QLTPGAQNALKALRDQGMPCAWIDELPEALSTPLA 70 (196)
T ss_dssp SBCTTHHHHHHHHHHHTCCEEEECCSCHHHHHHHH
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEcCChHHHHHHhc
Confidence 57899999999999999999999999887664433
|
| >2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.19 E-value=0.0022 Score=60.90 Aligned_cols=40 Identities=13% Similarity=0.077 Sum_probs=34.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
++.+++.++++.|+++|+++.++|+.....+..+.+.+|+
T Consensus 18 ~~~~~~~~~l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~l 57 (137)
T 2pr7_A 18 EDQRRWRNLLAAAKKNGVGTVILSNDPGGLGAAPIRELET 57 (137)
T ss_dssp HHHHHHHHHHHHHHHTTCEEEEEECSCCGGGGHHHHHHHH
T ss_pred ccCccHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHCCh
Confidence 3567899999999999999999999988877777777665
|
| >1qyi_A ZR25, hypothetical protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.50A {Staphylococcus aureus subsp} SCOP: c.108.1.13 | Back alignment and structure |
|---|
Probab=96.10 E-value=0.014 Score=66.10 Aligned_cols=42 Identities=19% Similarity=0.242 Sum_probs=37.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
++.||+.++++.|+++|+++.++|+.....+..+....|+..
T Consensus 215 ~l~pGv~elL~~Lk~~Gi~laIvTn~~~~~~~~~L~~lgL~~ 256 (384)
T 1qyi_A 215 RPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLP 256 (384)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGG
T ss_pred CcCcCHHHHHHHHHhCCCEEEEEeCCcHHHHHHHHHHcCChH
Confidence 567899999999999999999999999999988888888843
|
| >4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A | Back alignment and structure |
|---|
Probab=96.06 E-value=0.0028 Score=66.45 Aligned_cols=35 Identities=9% Similarity=0.069 Sum_probs=29.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIAL 648 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~ 648 (1104)
++.+++.++++.|++. +++.++|+.....+..+..
T Consensus 112 ~~~~~~~~~l~~l~~~-~~~~i~Sn~~~~~~~~~~~ 146 (229)
T 4dcc_A 112 DIPTYKLDLLLKLREK-YVVYLLSNTNDIHWKWVCK 146 (229)
T ss_dssp CCCHHHHHHHHHHTTT-SEEEEEECCCHHHHHHHHH
T ss_pred hccHHHHHHHHHHHhc-CcEEEEECCChHHHHHHHh
Confidence 3668999999999999 9999999998887776553
|
| >2oyc_A PLP phosphatase, pyridoxal phosphate phosphatase; structural genomics, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI-2; 1.72A {Homo sapiens} PDB: 2p27_A 2p69_A* 2cft_A* 2cfs_A 2cfr_A* | Back alignment and structure |
|---|
Probab=96.04 E-value=0.048 Score=59.90 Aligned_cols=43 Identities=21% Similarity=0.243 Sum_probs=36.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~ 653 (1104)
.+++-+++.++++.|+++|++++++| |+.........+.+|+.
T Consensus 35 ~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~~~~~~~~~~~~~~g~~ 80 (306)
T 2oyc_A 35 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFG 80 (306)
T ss_dssp TTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCC
T ss_pred CCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHhcCCC
Confidence 45677899999999999999999999 57777777777788874
|
| >4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile} | Back alignment and structure |
|---|
Probab=95.89 E-value=0.013 Score=62.41 Aligned_cols=119 Identities=15% Similarity=0.191 Sum_probs=75.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEP 690 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 690 (1104)
..++.+++.+.++.|++.|+++.+.|+.. .+..+.+.+|+...-.. +
T Consensus 114 ~~~~~p~~~~ll~~Lk~~g~~i~i~~~~~--~~~~~L~~~gl~~~Fd~--i----------------------------- 160 (250)
T 4gib_A 114 SNDILPGIESLLIDVKSNNIKIGLSSASK--NAINVLNHLGISDKFDF--I----------------------------- 160 (250)
T ss_dssp GGGSCTTHHHHHHHHHHTTCEEEECCSCT--THHHHHHHHTCGGGCSE--E-----------------------------
T ss_pred ccccchhHHHHHHHHHhcccccccccccc--hhhhHhhhcccccccce--e-----------------------------
Confidence 34678999999999999999999888764 35566777787432110 0
Q ss_pred CceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc-eEEe
Q 001304 691 KDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (1104)
Q Consensus 691 ~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIam 769 (1104)
+.++ ..-...=.|+-=..+++.+.-..+.+++|||+.+|+.+-+.|++ .|++
T Consensus 161 ------~~~~---------------------~~~~~KP~p~~~~~a~~~lg~~p~e~l~VGDs~~Di~aA~~aG~~~i~v 213 (250)
T 4gib_A 161 ------ADAG---------------------KCKNNKPHPEIFLMSAKGLNVNPQNCIGIEDASAGIDAINSANMFSVGV 213 (250)
T ss_dssp ------CCGG---------------------GCCSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred ------eccc---------------------ccCCCCCcHHHHHHHHHHhCCChHHeEEECCCHHHHHHHHHcCCEEEEE
Confidence 0000 00001112222223444444345789999999999999999998 5577
Q ss_pred cCCchHHHhhhcceecccchhhH
Q 001304 770 SGREGLQAARAADYSIGKFRFLK 792 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~l~ 792 (1104)
++.. -...||+++.+++.|.
T Consensus 214 -~~~~--~~~~ad~vi~~l~eL~ 233 (250)
T 4gib_A 214 -GNYE--NLKKANLVVDSTNQLK 233 (250)
T ss_dssp -SCTT--TTTTSSEEESSGGGCC
T ss_pred -CChh--HhccCCEEECChHhCC
Confidence 3322 2346899998877663
|
| >3pct_A Class C acid phosphatase; hydrolase, outer membrane; 1.85A {Pasteurella multocida} | Back alignment and structure |
|---|
Probab=95.76 E-value=0.012 Score=62.43 Aligned_cols=43 Identities=9% Similarity=0.183 Sum_probs=36.6
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHh----HHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN----TAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~----ta~~ia~~~gi~ 653 (1104)
+.++.|++.+.++.|+++|+++.++||++.. .+..-.+++||-
T Consensus 99 ~~~~~pg~~ell~~L~~~G~~i~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (260)
T 3pct_A 99 QSAAIPGAVEFSNYVNANGGTMFFVSNRRDDVEKAGTVDDMKRLGFT 145 (260)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEETTTSHHHHHHHHHHHTCC
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCcC
Confidence 4678999999999999999999999999753 666667778884
|
| >2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=95.38 E-value=0.025 Score=58.67 Aligned_cols=40 Identities=15% Similarity=0.202 Sum_probs=34.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++.+++.++++.|+++|+++.++|+... .+..+...+|+.
T Consensus 95 ~~~~~~~~~l~~l~~~g~~~~i~Tn~~~-~~~~~l~~~gl~ 134 (220)
T 2zg6_A 95 FLYDDTLEFLEGLKSNGYKLALVSNASP-RVKTLLEKFDLK 134 (220)
T ss_dssp EECTTHHHHHHHHHTTTCEEEECCSCHH-HHHHHHHHHTCG
T ss_pred eECcCHHHHHHHHHHCCCEEEEEeCCcH-HHHHHHHhcCcH
Confidence 5779999999999999999999999866 467777778873
|
| >2fpr_A Histidine biosynthesis bifunctional protein HISB; histidinola phosphate phosphatase, bifunctional enzyme structural genomics; 1.70A {Escherichia coli} SCOP: c.108.1.19 PDB: 2fps_A 2fpu_A* 2fpx_A 2fpw_A* | Back alignment and structure |
|---|
Probab=95.20 E-value=0.0081 Score=60.32 Aligned_cols=40 Identities=30% Similarity=0.383 Sum_probs=33.4
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC---------------CHhHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD---------------KQNTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD---------------~~~ta~~ia~~~gi 652 (1104)
++.|++.++++.|+++|+++.++|+. ....+..+....|+
T Consensus 42 ~~~pg~~e~L~~L~~~G~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl 96 (176)
T 2fpr_A 42 AFEPGVIPQLLKLQKAGYKLVMITNQDGLGTQSFPQADFDGPHNLMMQIFTSQGV 96 (176)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEECTTTTBTTBCHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCccHHHHHHHHHHCCCEEEEEECCccccccccchHhhhhhHHHHHHHHHHcCC
Confidence 57899999999999999999999997 34556666677776
|
| >2p11_A Hypothetical protein; putative haloacid dehalogenase-like hydrolase, structural GE joint center for structural genomics, JCSG; 2.20A {Burkholderia xenovorans} | Back alignment and structure |
|---|
Probab=95.16 E-value=0.046 Score=57.12 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=35.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNF 652 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi 652 (1104)
-++.+++.++++.|+++| ++.++|+.....+..+...+|+
T Consensus 95 ~~~~~g~~~~l~~l~~~g-~~~i~Tn~~~~~~~~~l~~~gl 134 (231)
T 2p11_A 95 SRVYPGALNALRHLGARG-PTVILSDGDVVFQPRKIARSGL 134 (231)
T ss_dssp GGBCTTHHHHHHHHHTTS-CEEEEEECCSSHHHHHHHHTTH
T ss_pred CCcCccHHHHHHHHHhCC-CEEEEeCCCHHHHHHHHHHcCc
Confidence 368999999999999999 9999999988888888877776
|
| >3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A | Back alignment and structure |
|---|
Probab=94.98 E-value=0.018 Score=61.17 Aligned_cols=43 Identities=16% Similarity=0.139 Sum_probs=36.1
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCH----hHHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~----~ta~~ia~~~gi~ 653 (1104)
++++.|++.+.++.|+++|+++.++||++. ..+..-.+..|+-
T Consensus 99 ~~~~~pG~~ell~~L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~ 145 (262)
T 3ocu_A 99 QSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFN 145 (262)
T ss_dssp CCEECTTHHHHHHHHHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCS
T ss_pred CCCCCccHHHHHHHHHHCCCeEEEEeCCCccchHHHHHHHHHHcCcC
Confidence 467899999999999999999999999975 3556666778874
|
| >2kmv_A Copper-transporting ATPase 1; menkes, nucleotide binding protein, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens} PDB: 2kmx_A* | Back alignment and structure |
|---|
Probab=94.56 E-value=0.62 Score=46.68 Aligned_cols=53 Identities=17% Similarity=0.176 Sum_probs=37.1
Q ss_pred EEecChHHhhhhhhccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhcc
Q 001304 521 LLSKGADEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEH 600 (1104)
Q Consensus 521 l~~KGa~e~i~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~ 600 (1104)
.+.-|..+.|-..-. ...+.....++++..+|..++.+| .
T Consensus 133 ~v~iGn~~~m~~~gi--~i~~~~~~~~~~~~~~G~T~V~va--------------------------------------i 172 (185)
T 2kmv_A 133 KVLIGNREWMIRNGL--VINNDVNDFMTEHERKGRTAVLVA--------------------------------------V 172 (185)
T ss_dssp EEEEECHHHHHHHTC--CCCHHHHHHHHHHHHTTCEEEEEE--------------------------------------E
T ss_pred EEEECCHHHHHHcCC--CCCHHHHHHHHHHHhCCCeEEEEE--------------------------------------E
Confidence 455688776644211 112345566778888999999888 4
Q ss_pred CcEEEEEEeeccc
Q 001304 601 DLKVLGVTAIEDR 613 (1104)
Q Consensus 601 ~l~llG~i~i~D~ 613 (1104)
|-.++|++++.|+
T Consensus 173 dg~l~g~iavaD~ 185 (185)
T 2kmv_A 173 DDELCGLIAIADT 185 (185)
T ss_dssp TTEEEEEEEEECC
T ss_pred CCEEEEEEEEEcC
Confidence 6789999999995
|
| >2i33_A Acid phosphatase; HAD superfamily, hydrolase; 1.57A {Bacillus anthracis} PDB: 2i34_A | Back alignment and structure |
|---|
Probab=94.39 E-value=0.044 Score=58.58 Aligned_cols=43 Identities=14% Similarity=0.219 Sum_probs=34.7
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHh---HHHHHHHHcCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQN---TAIQIALSCNFI 653 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~---ta~~ia~~~gi~ 653 (1104)
+.++.+++.++|+.|+++|+++.++||+... .+......+|+.
T Consensus 99 ~~~~~pg~~e~L~~L~~~Gi~i~iaTnr~~~~~~~~~~~L~~~Gl~ 144 (258)
T 2i33_A 99 EAEALPGSIDFLKYTESKGVDIYYISNRKTNQLDATIKNLERVGAP 144 (258)
T ss_dssp CCEECTTHHHHHHHHHHTTCEEEEEEEEEGGGHHHHHHHHHHHTCS
T ss_pred CCCcCccHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHHHHHcCCC
Confidence 3567899999999999999999999999843 444555667774
|
| >2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A | Back alignment and structure |
|---|
Probab=94.38 E-value=0.14 Score=54.16 Aligned_cols=44 Identities=18% Similarity=0.282 Sum_probs=32.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEc---CCCHhHHHHHHHHcCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLT---GDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlT---GD~~~ta~~ia~~~gi~~ 654 (1104)
.++.-+++.++++.++++|++++++| |.............|+..
T Consensus 21 ~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~ 67 (259)
T 2ho4_A 21 EDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEI 67 (259)
T ss_dssp ---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCC
T ss_pred CCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCc
Confidence 34455788999999999999999999 666666666666777643
|
| >1yns_A E-1 enzyme; hydrolase fold; HET: HPO; 1.70A {Homo sapiens} SCOP: c.108.1.22 PDB: 1zs9_A | Back alignment and structure |
|---|
Probab=94.10 E-value=0.075 Score=56.89 Aligned_cols=39 Identities=10% Similarity=0.198 Sum_probs=33.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
-++.+++.++++.|+++|+++.++|+.+...+..+....
T Consensus 129 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~~~l~~~ 167 (261)
T 1yns_A 129 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHS 167 (261)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTB
T ss_pred cccCcCHHHHHHHHHhCCCeEEEEeCCCHHHHHHHHHhh
Confidence 468899999999999999999999999888777666543
|
| >1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A | Back alignment and structure |
|---|
Probab=93.98 E-value=0.057 Score=59.16 Aligned_cols=32 Identities=19% Similarity=0.228 Sum_probs=28.3
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhH
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNT 642 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~t 642 (1104)
++++.+++.++++.|+++|+++.++||.....
T Consensus 186 ~~~~~~g~~e~L~~L~~~g~~~~v~T~k~~~~ 217 (301)
T 1ltq_A 186 TDVINPMVVELSKMYALMGYQIVVVSGRESGT 217 (301)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCCCC
T ss_pred ccCCChHHHHHHHHHHHCCCeEEEEeCCCccc
Confidence 45678999999999999999999999998543
|
| >4as2_A Phosphorylcholine phosphatase; hydrolase, HAD superfamily, alkylammonium compounds; HET: BTB; 2.12A {Pseudomonas aeruginosa} PDB: 4as3_A* | Back alignment and structure |
|---|
Probab=91.88 E-value=0.087 Score=58.19 Aligned_cols=42 Identities=17% Similarity=0.261 Sum_probs=37.7
Q ss_pred eecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 609 AIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 609 ~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
.....+.++..+.++.|+++|++||++||-..+.+..+|...
T Consensus 139 ~~~~~~~~~~~~l~~~l~~~G~~v~ivSas~~~~v~~~a~~~ 180 (327)
T 4as2_A 139 VEPPRVFSGQRELYNKLMENGIEVYVISAAHEELVRMVAADP 180 (327)
T ss_dssp ECCCEECHHHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHTCG
T ss_pred ccccccCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHhhc
Confidence 344467899999999999999999999999999999999875
|
| >1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14 | Back alignment and structure |
|---|
Probab=90.83 E-value=0.47 Score=50.39 Aligned_cols=40 Identities=13% Similarity=0.208 Sum_probs=32.9
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH----cCCCC
Q 001304 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS----CNFIS 654 (1104)
Q Consensus 615 r~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~----~gi~~ 654 (1104)
-+++.++++.+++.|+++.++||+...+...++.. +|+..
T Consensus 23 ~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 23 IPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred CcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 36788999999999999999999988777666654 78743
|
| >4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli} | Back alignment and structure |
|---|
Probab=90.47 E-value=0.26 Score=51.83 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=32.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.++.+++.+.++.|+++|+++.++|+... +..+....|+.
T Consensus 94 ~~~~pg~~~ll~~L~~~g~~i~i~t~~~~--~~~~l~~~gl~ 133 (243)
T 4g9b_A 94 NAVLPGIRSLLADLRAQQISVGLASVSLN--APTILAALELR 133 (243)
T ss_dssp GGBCTTHHHHHHHHHHTTCEEEECCCCTT--HHHHHHHTTCG
T ss_pred ccccccHHHHHHhhhcccccceecccccc--hhhhhhhhhhc
Confidence 45789999999999999999999998653 44556677763
|
| >2b82_A APHA, class B acid phosphatase; DDDD acid phosphatase, metallo-ENZ hydrolase; HET: ADN; 1.25A {Escherichia coli} SCOP: c.108.1.12 PDB: 2b8j_A* 2hf7_A 1rmt_A* 1n9k_A 1rmq_A 1n8n_A* 1rmy_A* 2g1a_A* 3cz4_A 2heg_A* 1z5g_A 1z5u_A* 1z88_A 2aut_A | Back alignment and structure |
|---|
Probab=89.96 E-value=0.051 Score=56.19 Aligned_cols=28 Identities=14% Similarity=0.266 Sum_probs=24.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHh
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQN 641 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ 641 (1104)
+.+++.++++.|+++|+++.++||....
T Consensus 89 ~~~~~~e~l~~L~~~G~~l~ivTn~~~~ 116 (211)
T 2b82_A 89 PKEVARQLIDMHVRRGDAIFFVTGRSPT 116 (211)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCC
T ss_pred CcHHHHHHHHHHHHCCCEEEEEcCCcHH
Confidence 4568999999999999999999998653
|
| >1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=89.28 E-value=2.8 Score=44.31 Aligned_cols=41 Identities=32% Similarity=0.339 Sum_probs=33.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHH---cCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALS---CNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~---~gi~ 653 (1104)
.+-+++.++++.++++|+++.++||+...+...++.+ +|+.
T Consensus 17 ~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~ 60 (263)
T 1zjj_A 17 RAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGID 60 (263)
T ss_dssp EECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCC
T ss_pred EeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCC
Confidence 3347899999999999999999999998777766665 5663
|
| >2obb_A Hypothetical protein; structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic unknown function; 2.20A {Bacteroides thetaiotaomicron} SCOP: c.108.1.25 | Back alignment and structure |
|---|
Probab=89.15 E-value=0.44 Score=45.42 Aligned_cols=40 Identities=13% Similarity=0.049 Sum_probs=34.2
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCC---HhHHHHHHHHcCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDK---QNTAIQIALSCNFI 653 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~---~~ta~~ia~~~gi~ 653 (1104)
+.+++.++|++++++|++++++||++ ...+...+.+.|+.
T Consensus 25 ~~~~~~~al~~l~~~G~~iii~TgR~~~~~~~~~~~l~~~gi~ 67 (142)
T 2obb_A 25 EIPFAVETLKLLQQEKHRLILWSVREGELLDEAIEWCRARGLE 67 (142)
T ss_dssp BCTTHHHHHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTTCC
T ss_pred cCHHHHHHHHHHHHCCCEEEEEeCCCcccHHHHHHHHHHcCCC
Confidence 45789999999999999999999998 56667777888873
|
| >3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A* | Back alignment and structure |
|---|
Probab=85.55 E-value=1.1 Score=51.40 Aligned_cols=26 Identities=19% Similarity=0.427 Sum_probs=24.5
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDK 639 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~ 639 (1104)
+-+++.++|+.|+++|+++.++|+..
T Consensus 88 ~~pgv~e~L~~L~~~G~~l~IvTN~~ 113 (416)
T 3zvl_A 88 LYPEIPKKLQELAAEGYKLVIFTNQM 113 (416)
T ss_dssp SCTTHHHHHHHHHHTTCEEEEEEECH
T ss_pred hcccHHHHHHHHHHCCCeEEEEeCCc
Confidence 67999999999999999999999965
|
| >3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A* | Back alignment and structure |
|---|
Probab=84.44 E-value=0.79 Score=54.07 Aligned_cols=26 Identities=23% Similarity=0.321 Sum_probs=24.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++.+++.++++.|+++|+++.++|+-
T Consensus 100 ~~~~~~~~~L~~L~~~g~~~~i~Tn~ 125 (555)
T 3i28_A 100 KINRPMLQAALMLRKKGFTTAILTNT 125 (555)
T ss_dssp EECHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CcChhHHHHHHHHHHCCCEEEEEeCC
Confidence 57899999999999999999999985
|
| >4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A | Back alignment and structure |
|---|
Probab=80.67 E-value=0.51 Score=51.31 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=24.8
Q ss_pred CCCccccccccccccc---------cceEEEEecCCCCCCCcce
Q 001304 357 TDTPSHATNTAISEDL---------AQVEYILTDKTGTLTENRM 391 (1104)
Q Consensus 357 ~~~~~~~~~~~~~E~L---------g~v~~I~~DKTGTLT~n~m 391 (1104)
.+..+++|++..+|.+ .++. |+||||||||+...
T Consensus 17 ~k~~v~ikd~~~~e~~i~~~~kgg~~kL~-VV~DfdgTLT~~~~ 59 (297)
T 4fe3_A 17 QKSSVRIKNPTRVEEIICGLIKGGAAKLQ-IITDFNMTLSRFSY 59 (297)
T ss_dssp TSTTEECSCHHHHHHHHHHHHHHHHHHEE-EEECCTTTTBCSEE
T ss_pred hcCCeEEcChHHHHHHHHHHHhCcchhEE-EEEcCCCCceeecc
Confidence 3445889998888773 4555 56799999998654
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1104 | ||||
| d1qyia_ | 380 | c.108.1.13 (A:) Hypothetical protein MW1667 (SA154 | 8e-27 | |
| d1wpga3 | 239 | d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryc | 2e-22 | |
| d1q3ia_ | 214 | d.220.1.1 (A:) Sodium/potassium-transporting ATPas | 6e-16 | |
| d1wpga2 | 168 | c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, ca | 2e-13 | |
| d1nnla_ | 217 | c.108.1.4 (A:) Phosphoserine phosphatase {Human (H | 2e-06 | |
| d1wr8a_ | 230 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-06 | |
| d2b8ea1 | 135 | c.108.1.7 (A:416-434,A:548-663) Cation-transportin | 4e-06 | |
| d1l6ra_ | 225 | c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPa | 3e-05 | |
| d1rkua_ | 206 | c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomona | 2e-04 | |
| d1nrwa_ | 285 | c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillu | 7e-04 | |
| d1j97a_ | 210 | c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon | 0.002 | |
| d1xvia_ | 232 | c.108.1.10 (A:) Putative mannosyl-3-phosphoglycera | 0.002 | |
| d2feaa1 | 226 | c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthio | 0.003 |
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} Length = 380 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Score = 111 bits (279), Expect = 8e-27
Identities = 53/447 (11%), Positives = 107/447 (23%), Gaps = 106/447 (23%)
Query: 363 ATNTAISEDLAQVEY------ILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGL 416
+ + E L Y I + + R IF ++ + LK
Sbjct: 21 VSALTVYELLMDKCYLGLHSHIDWETLTDNDIQDIRNR------IFQKDKILNKLK---- 70
Query: 417 LNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNK 476
+ G L ++ + + IL K + EA ++
Sbjct: 71 ----SLGLNSNWDMLFIVFSIHLI--------DILKKLSHDEIEAFMYQDE--------- 109
Query: 477 NASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPYAHA 536
+E+K L + + V + + L + A + +
Sbjct: 110 ---PVELKLQNISTNLADCFNLNEQLPLQFLDNVKVGKN-NIYAALEEFATTELHV---S 162
Query: 537 GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQ 596
+ A+ +Q + L + E+ E + FK +
Sbjct: 163 DATLFSLKGALWTLAQEVYQEWYLGSKLYEDVEKKIARTTFKTGYIYQEIILRPV----- 217
Query: 597 RLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE 656
D V + L+ AG + TG + + +
Sbjct: 218 -------------------DEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYF 258
Query: 657 PKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTEL 716
+ + V++ + + K
Sbjct: 259 EADFIATASD-----------------------------VLEAENMYPQARPLGKPNPF- 288
Query: 717 AILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD---IGV--GISG 771
+ + +GD D+ QK IG G+ G
Sbjct: 289 -SYIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIGATFIGTLTGLKG 347
Query: 772 REGLQ--AARAADYSIGKFRFLKRLIL 796
++ A ADY I L+ ++
Sbjct: 348 KDAAGELEAHHADYVINHLGELRGVLD 374
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 239 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 95.3 bits (236), Expect = 2e-22
Identities = 47/252 (18%), Positives = 77/252 (30%), Gaps = 42/252 (16%)
Query: 380 TDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNT 439
DK + F I G Y E G+ LK+ + + ++ T+ A+CN
Sbjct: 9 IDKVDGDFCSLNEFS---ITGSTYAPE-GEVLKNDKPIRS--GQFDGLVELATICALCND 62
Query: 440 VIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVL----QYEIL 495
++ + K E AL ++++ + N +
Sbjct: 63 SSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKE 122
Query: 496 ETLEFTSDRKRMSVVVK----DCHSGNISLLSKGADEAILP---YAHAGQQTRTFVEAVE 548
TLEF+ DRK MSV + + KGA E ++ Y G V+
Sbjct: 123 FTLEFSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVK 182
Query: 549 Q----------YSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRL 598
+ + LR L LA R+ +
Sbjct: 183 EKILSVIKEWGTGRDTLRCLALATRDTPPKREEMVLDDSSRFME---------------Y 227
Query: 599 EHDLKVLGVTAI 610
E DL +GV +
Sbjct: 228 ETDLTFVGVVGM 239
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} Length = 214 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Score = 75.7 bits (185), Expect = 6e-16
Identities = 28/204 (13%), Positives = 57/204 (27%), Gaps = 41/204 (20%)
Query: 424 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQ---SQDEEALVHAAAQLHMVLVNKNASI 480
SP + +CN + + + K E AL+ S+
Sbjct: 31 SPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCIELSCG-------SV 83
Query: 481 LEIKFNGSVLQYEILETLEFTSDRKRMSVVVKD-CHSGNISLLSKGADEAILPYA----- 534
+++ + + + F S K + + + + L+ KGA E IL
Sbjct: 84 RKMRD-----RNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILV 138
Query: 535 ------HAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDRE 588
+ F A + LG R L + ++ + +
Sbjct: 139 QGKEIPLDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKFDTDELNF----- 193
Query: 589 WRIAEVCQRLEHDLKVLGVTAIED 612
L +G+ ++ D
Sbjct: 194 ---------PTEKLCFVGLMSMID 208
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 168 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Score = 67.5 bits (164), Expect = 2e-13
Identities = 44/191 (23%), Positives = 69/191 (36%), Gaps = 41/191 (21%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQ 660
D T D + V +I+ R AGI M+TGD + TAI I +
Sbjct: 8 DKTGTLTTNQLDPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVA 67
Query: 661 LLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
+ G+ D++ + +R
Sbjct: 68 DRAYTGREFDDLPLAEQREACRR------------------------------------- 90
Query: 721 RTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAAR- 779
RV PS K+++VE L+S D T GDG ND ++KA+IG+ + G A+
Sbjct: 91 -ACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAMGS--GTAVAKT 147
Query: 780 AADYSIGKFRF 790
A++ + F
Sbjct: 148 ASEMVLADDNF 158
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} Length = 217 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Score = 48.0 bits (113), Expect = 2e-06
Identities = 32/215 (14%), Positives = 63/215 (29%), Gaps = 23/215 (10%)
Query: 582 STLIDRE--WRIAEVCQRLEHDLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDK 639
ST+I E +A++C + V+ + R G L + ++ +
Sbjct: 19 STVIREEGIDELAKICGVEDA------VSEMTRRAMGGAVPFKAALTE---RLALIQPSR 69
Query: 640 QNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699
+ IA ++P + + + + + +
Sbjct: 70 EQVQRLIAEQPPHLTPGIRELV---------SRLQERNVQVFLISGGFRSIVEHVASKLN 120
Query: 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL--KSCDYRTLAIGDGGNDV 757
+ K + K ++++LL K + + IGDG D+
Sbjct: 121 IPATNVFANRLKFYFNGEYAGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDM 180
Query: 758 RMIQKADIGVGISGREGL-QAARAADYSIGKFRFL 791
AD +G G Q A + I F L
Sbjct: 181 EACPPADAFIGFGGNVIRQQVKDNAKWYITDFVEL 215
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} Length = 230 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Score = 47.7 bits (112), Expect = 3e-06
Identities = 26/192 (13%), Positives = 56/192 (29%), Gaps = 21/192 (10%)
Query: 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTED 670
+ + E I GI ++TG+ A ++ P +I K +
Sbjct: 17 NRMIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKR 76
Query: 671 EVCRS-----------LERVLLTMRITTSEPKDVAFVVDGWALEI-ALKHYRKAFTELAI 718
S +R T + V+ + + ++ +
Sbjct: 77 IFLASMDEEWILWNEIRKRFPNARTSYTMPDRRAGLVIMRETINVETVREIINELNLNLV 136
Query: 719 LSRTAICCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-G 771
+ V + + K+ ++ +GDG ND+ + V ++
Sbjct: 137 AVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDGENDLDAFKVVGYKVAVAQA 196
Query: 772 REGLQAARAADY 783
+ L+ ADY
Sbjct: 197 PKILKE--NADY 206
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Length = 135 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Score = 45.1 bits (106), Expect = 4e-06
Identities = 10/41 (24%), Positives = 17/41 (41%)
Query: 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQN 641
D D L++ ++ L++ GI M+TGD
Sbjct: 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWR 49
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} Length = 225 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Score = 44.6 bits (104), Expect = 3e-05
Identities = 30/210 (14%), Positives = 63/210 (30%), Gaps = 25/210 (11%)
Query: 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP---EPKGQLLSIDGK 667
+ + E+I + K G+ +L+G+ + + P E G + DG
Sbjct: 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGPVFGENGGIMFDNDGS 77
Query: 668 TEDEVCRSLERVLLT-------MRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILS 720
+ L MR + A E ++A + ++
Sbjct: 78 IKKFFSNEGTNKFLEEMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRGFVIF 137
Query: 721 RTAICCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-GRE 773
+ + + + + K + L IGD ND+ M Q + +
Sbjct: 138 YSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDEILVIGDSNNDMPMFQLPVRKACPANATD 197
Query: 774 GLQAARAADYSI------GKFRFLKRLILV 797
++A +D+ + K L+
Sbjct: 198 NIKA--VSDFVSDYSYGEEIGQIFKHFELM 225
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} Length = 206 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Score = 41.4 bits (96), Expect = 2e-04
Identities = 23/110 (20%), Positives = 35/110 (31%)
Query: 695 FVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGG 754
++ E+ R K Q V KS YR +A GD
Sbjct: 96 EFSQPLMRQLGFPTLLCHKLEIDDSDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSY 155
Query: 755 NDVRMIQKADIGVGISGREGLQAARAADYSIGKFRFLKRLILVHGRYSYN 804
ND M+ +A G+ E + ++ + LKR L S +
Sbjct: 156 NDTTMLSEAHAGILFHAPENVIREFPQFPAVHTYEDLKREFLKASSRSLS 205
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} Length = 285 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Score = 40.3 bits (93), Expect = 7e-04
Identities = 34/204 (16%), Positives = 71/204 (34%), Gaps = 25/204 (12%)
Query: 615 QDGVPETIETLRKAGINFWMLTGD-----KQNTAIQIALSCNFISPEPKGQLLSIDGKTE 669
+ + + L + + TG + + F S P+ L + E
Sbjct: 84 KKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAE 143
Query: 670 DEVCRSLERVLLTMR--ITTSEPKDVAFVVDGWALEIALKHYRKAFT---ELAILSRTAI 724
+ +S + + + EP D ++ + L+ K + +L ++S
Sbjct: 144 VQYSQSGFAYINSFQELFEADEPIDFYNILGFSFFKEKLEAGWKRYEHAEDLTLVSSAEH 203
Query: 725 CCRVTPSQKAQLVELLKSCDY------RTLAIGDGGNDVRMIQKADIGVGIS-GREGLQA 777
++ + ++ L + T A+GD ND M++ A GV + RE +++
Sbjct: 204 NFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAMGNAREDIKS 263
Query: 778 ARAADYSI------GKFRFLKRLI 795
AD G +K L+
Sbjct: 264 --IADAVTLTNDEHGVAHMMKHLL 285
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 210 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Score = 38.6 bits (88), Expect = 0.002
Identities = 24/171 (14%), Positives = 56/171 (32%), Gaps = 4/171 (2%)
Query: 617 GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEV--CR 674
GV E ++ + K + + + + E + ++ E+ + +
Sbjct: 29 GVEEEVKKITKEAMEGKLNFEQSLRKRVSLLKDLPIEKVEKAIKRITPTEGAEETIKELK 88
Query: 675 SLERVLLTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKA 734
+ V+ + + G A + K + +
Sbjct: 89 NRGYVVAVVSGGFDIAVNKIKEKLGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILE 148
Query: 735 QLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785
++ ++ T+A+GDG ND+ M +KA + + + L+ AD I
Sbjct: 149 KIAKIEGINLEDTVAVGDGANDISMFKKAGLKIAFCAKPILKE--KADICI 197
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Score = 38.5 bits (88), Expect = 0.002
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 746 RTLAIGDGGNDVRMIQKADIGVGISG 771
TL +GDG ND +++ D V + G
Sbjct: 205 TTLGLGDGPNDAPLLEVMDYAVIVKG 230
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} Length = 226 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Score = 38.4 bits (88), Expect = 0.003
Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Query: 724 ICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-SGREGLQAARAAD 782
C K ++ L + + IGD DV + +D+ +
Sbjct: 141 TCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFARDYLLNECREQNLNH 200
Query: 783 YSIGKFRFLKRLI 795
F +++ I
Sbjct: 201 LPYQDFYEIRKEI 213
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1104 | |||
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 99.93 | |
| d1q3ia_ | 214 | Sodium/potassium-transporting ATPase alpha chain { | 99.91 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 99.89 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 99.89 | |
| d1wpga1 | 115 | Calcium ATPase, transduction domain A {Rabbit (Ory | 99.85 | |
| d1wpga3 | 239 | Calcium ATPase {Rabbit (Oryctolagus cuniculus) [Ta | 99.84 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.5 | |
| d1wpga4 | 472 | Calcium ATPase, transmembrane domain M {Rabbit (Or | 99.22 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.14 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 99.14 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.09 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 99.08 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.01 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 98.97 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.95 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 98.93 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 98.87 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.78 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.77 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 98.71 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 98.49 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.46 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 98.46 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.29 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 98.22 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 98.0 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 97.48 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 97.4 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 97.36 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 97.29 | |
| d1swva_ | 257 | Phosphonoacetaldehyde hydrolase {Bacillus cereus [ | 96.97 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 96.9 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 96.67 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 96.42 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 96.41 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 96.39 | |
| d1x42a1 | 230 | Hypothetical protein PH0459 {Archaeon Pyrococcus h | 96.28 | |
| d1zs9a1 | 253 | E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | 96.09 | |
| d2a29a1 | 136 | Potassium-transporting ATPase B chain, KdpB {Esche | 95.98 | |
| d2gfha1 | 247 | N-acylneuraminate-9-phosphatase NANP {Mouse (Mus m | 95.65 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 95.62 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 95.6 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 95.59 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.57 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 95.21 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 94.61 | |
| d1o08a_ | 221 | beta-Phosphoglucomutase {Lactococcus lactis [TaxId | 94.1 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 93.99 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 93.88 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 93.6 | |
| d2b82a1 | 209 | Class B acid phosphatase, AphA {Escherichia coli [ | 93.52 | |
| d1y8aa1 | 308 | Hypothetical protein AF1437 {Archaeon Archaeoglobu | 92.6 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 90.48 | |
| d2fdra1 | 222 | Hypothetical protein Atu0790 {Agrobacterium tumefa | 90.47 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 87.54 | |
| d1qq5a_ | 245 | L-2-Haloacid dehalogenase, HAD {Xanthobacter autot | 87.22 |
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.93 E-value=1.9e-26 Score=229.05 Aligned_cols=148 Identities=30% Similarity=0.383 Sum_probs=115.3
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
||+|++++++|+.|+++||+|||+|||+..||.++|+++||..++.....
T Consensus 19 Dp~R~~~~~~I~~l~~~GI~v~miTGD~~~tA~~ia~~~Gi~~~~~~v~~------------------------------ 68 (168)
T d1wpga2 19 DPPRKEVMGSIQLCRDAGIRVIMITGDNKGTAIAICRRIGIFGENEEVAD------------------------------ 68 (168)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTSSCTTCCCTT------------------------------
T ss_pred CCCchhHHHHHHHHHHCcCEEEEECCCCHHHHHHHHHHcCCCCCcccccc------------------------------
Confidence 99999999999999999999999999999999999999999877643100
Q ss_pred ceEEEEcchhHHHHHHH-HHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec
Q 001304 692 DVAFVVDGWALEIALKH-YRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~-~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
..++|..+...... ..+. ..+..+|+|++|+||..+|+.+|+.|++|+|+|||.||++||++|||||+|
T Consensus 69 ---~~~~~~~~~~~~~~~~~~~------~~~~~v~ar~~p~~K~~lv~~l~~~g~~Va~vGDG~nD~~AL~~AdvGIa~- 138 (168)
T d1wpga2 69 ---RAYTGREFDDLPLAEQREA------CRRACCFARVEPSHKSKIVEYLQSYDEITAMTGDGVNDAPALKKAEIGIAM- 138 (168)
T ss_dssp ---TEEEHHHHHHSCHHHHHHH------HHHCCEEESCCHHHHHHHHHHHHHTTCCEEEEECSGGGHHHHHHSSEEEEE-
T ss_pred ---ccccccccchhhHHHHhhh------hhhhhhhhccchhHHHHHHHHHHhcccceeEEecCCCCHHHHHhCCEEEEe-
Confidence 01223333221111 1111 234689999999999999999999999999999999999999999999999
Q ss_pred CCchHHHhhhcceecccchhhHHH-HHhhh
Q 001304 771 GREGLQAARAADYSIGKFRFLKRL-ILVHG 799 (1104)
Q Consensus 771 g~~~~~a~~~AD~vl~~f~~l~~l-ll~~G 799 (1104)
++...-++++||+++.+.++-..+ ++.||
T Consensus 139 ~~gt~~a~~aAdivl~~~~l~~v~~~I~~G 168 (168)
T d1wpga2 139 GSGTAVAKTASEMVLADDNFSTIVAAVEEG 168 (168)
T ss_dssp TTSCHHHHHTCSEEETTCCTHHHHHHHHHH
T ss_pred ccccHHHHHhCCEEEccCCHHHHHHHHHcC
Confidence 543344556999999986664433 34665
|
| >d1q3ia_ d.220.1.1 (A:) Sodium/potassium-transporting ATPase alpha chain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Sodium/potassium-transporting ATPase alpha chain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=99.91 E-value=2.1e-26 Score=240.58 Aligned_cols=198 Identities=15% Similarity=0.145 Sum_probs=137.5
Q ss_pred ceEEEEEEEecEEecCCCCcCCCchhhhhhhccCCchHHHHHHHHhhhcccccccCCCCce---eeecCCccHHHHHHHH
Q 001304 390 RMIFRRCCIGGIFYGNETGDALKDVGLLNAITSGSPDVIRFLTVMAVCNTVIPAKSKAGAI---LYKAQSQDEEALVHAA 466 (1104)
Q Consensus 390 ~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lalc~~~~~~~~~~~~~---~~~~~~p~e~Al~~~a 466 (1104)
.|+|.++|++|+.|..+....... ......++.+..++.++++||++....++++.. ....|||+|.||+.+|
T Consensus 1 ~MTV~~~w~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~~~lcn~a~~~~~~~~~~~~~~~~~GdptE~ALl~~a 76 (214)
T d1q3ia_ 1 MMTVAHMWFDNQIHEADTTEDQSG----ATFDKRSPTWTALSRIAGLCNRAVFKAGQENISVSKRDTAGDASESALLKCI 76 (214)
T ss_dssp CCEEEEEEETTEEEECCCC----------CCCCCSHHHHHHHHHHHHSCCCCCC----------CCCCSCHHHHHHHHHH
T ss_pred CeEEEEEEECCEEEEcCCCCcCCC----cccccCCHHHHHHHHHHHHhCCCccccCCCCCcccccccccChHHHHHHHHH
Confidence 399999999999885432211110 111234567778999999999988765433211 1236999999999999
Q ss_pred HhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCC-CCcEEEEecChHHhhhhhhcc---------
Q 001304 467 AQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCH-SGNISLLSKGADEAILPYAHA--------- 536 (1104)
Q Consensus 467 ~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~-~~~~~l~~KGa~e~i~~~~~~--------- 536 (1104)
.+.|.... ..+..|+++..+||+|+||||+++++.+. ++++++|+|||||.|+++|+.
T Consensus 77 ~~~~~~~~------------~~r~~~~~v~~~pF~S~rK~ms~v~~~~~~~~~~~~~~KGApe~Il~~C~~~~~~g~~~~ 144 (214)
T d1q3ia_ 77 ELSCGSVR------------KMRDRNPKVAEISFNSTNKYQLSIHEREDNPQSHVLVMKGAPERILDRCSSILVQGKEIP 144 (214)
T ss_dssp HHHHSCHH------------HHHHTSCEEEEEC------CEEEEEECSSCTTSEEEEEEECHHHHHHTEEEEEETTEEEE
T ss_pred HHhCCCHH------------HHHhhCcEeeeEeeCCCCCEEEEEEEccCCCCceeEEecCCHHHHHHhhhheeeCCceee
Confidence 98776431 22345678899999999999999998753 467899999999999999972
Q ss_pred --CCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeecccC
Q 001304 537 --GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIEDRL 614 (1104)
Q Consensus 537 --~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~D~l 614 (1104)
.+..+.+.+.+++||.+|+|||++|||+++.++++.|... +.+ ..+.+|+||+|+|++||+||+
T Consensus 145 l~~~~~~~i~~~~~~~a~~GlRvLa~A~k~l~~~~~~~~~~~---------~~~-----~~~~~e~~L~flGlvgi~DPP 210 (214)
T d1q3ia_ 145 LDKEMQDAFQNAYLELGGLGERVLGFCQLNLPSGKFPRGFKF---------DTD-----ELNFPTEKLCFVGLMSMIDHH 210 (214)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTTSCTTCCC---------CTT-----TTSSCCSSEEEEEEEEEESCC
T ss_pred chHHHHHHHHHHHHHHhhCCcEEEEEEEEecCcccccccccc---------Chh-----hhhhhcCCCEEEEEEEEEeCC
Confidence 1224678999999999999999999999988776543210 000 113567899999999999999
Q ss_pred CCC
Q 001304 615 QDG 617 (1104)
Q Consensus 615 r~~ 617 (1104)
|++
T Consensus 211 R~~ 213 (214)
T d1q3ia_ 211 HHH 213 (214)
T ss_dssp SCC
T ss_pred CCC
Confidence 975
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=99.89 E-value=2.1e-28 Score=279.26 Aligned_cols=331 Identities=15% Similarity=0.040 Sum_probs=218.5
Q ss_pred ccccccceEEEEecCCCCCCCcceEEEEEEEecEEecCCCCcCCCchhhhhhhc-cCCchHHHHHHHHhhhcccccccCC
Q 001304 368 ISEDLAQVEYILTDKTGTLTENRMIFRRCCIGGIFYGNETGDALKDVGLLNAIT-SGSPDVIRFLTVMAVCNTVIPAKSK 446 (1104)
Q Consensus 368 ~~E~Lg~v~~I~~DKTGTLT~n~m~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lalc~~~~~~~~~ 446 (1104)
..|.||..+++|+|||||+|.|.|+++.+. +.+.+..+. ..-++..++..+.++|+.+....
T Consensus 32 s~e~Lg~~~~i~~~k~~~~t~~~i~~~~~~---------------~~~il~~~k~~g~n~~~dl~~~~~~~~~~~~~~-- 94 (380)
T d1qyia_ 32 DKCYLGLHSHIDWETLTDNDIQDIRNRIFQ---------------KDKILNKLKSLGLNSNWDMLFIVFSIHLIDILK-- 94 (380)
T ss_dssp CTTTTCCSCCCCGGGCCHHHHHHHHHHHHT---------------TTHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHT--
T ss_pred chhhcccceeeecCcccchhhhhheeeeec---------------chhhhHhhhhcCCChhHHHHHHHHHHHHHHHHh--
Confidence 358999999999999999999999764321 111111111 11122234566677787654322
Q ss_pred CCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecCh
Q 001304 447 AGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGA 526 (1104)
Q Consensus 447 ~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa 526 (1104)
..++|++.+++...+..+..+ ....+.+.....+||++.+|+|++..... ++.+..+.||+
T Consensus 95 ------~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~i~f~~~~k~~~~~~~~~-~~~~~~~~~~a 155 (380)
T d1qyia_ 95 ------KLSHDEIEAFMYQDEPVELKL------------QNISTNLADCFNLNEQLPLQFLDNVKVGK-NNIYAALEEFA 155 (380)
T ss_dssp ------TSCHHHHHHHHHCSSCHHHHH------------TTSGGGCSSCCCCCTTTTHHHHTTCCSSH-HHHHHHHHHHH
T ss_pred ------hcCCCcHHHHHHHHhhccchH------------HHHHHhccccccCCcchHHHHHhhhcccc-cchhHhhhhcc
Confidence 246788888887654433221 11122233445789999999999876543 34455566777
Q ss_pred HHhhhhhhccCCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEE
Q 001304 527 DEAILPYAHAGQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLG 606 (1104)
Q Consensus 527 ~e~i~~~~~~~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG 606 (1104)
++.+.. .......+...+.+++.+|+|++++|++..++.+ .....+....|
T Consensus 156 ~~~~~~---~~~~~~~~~~~~~~~a~~~~r~l~~~~~~~~~~~--------------------------~~~~~~~~~~g 206 (380)
T d1qyia_ 156 TTELHV---SDATLFSLKGALWTLAQEVYQEWYLGSKLYEDVE--------------------------KKIARTTFKTG 206 (380)
T ss_dssp HHHTTC---SCCGGGSTTCHHHHHHHHHHHHHHHHHHHHHHHH--------------------------CSCCSCSSCCC
T ss_pred HhhcCC---cHHHHHHHHhHHHHHHHHHHHHHHHhhhcccccc--------------------------cccchhhHhcc
Confidence 776532 2233455677889999999999999866443221 12234556679
Q ss_pred EEeecccCCC--ChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHcc
Q 001304 607 VTAIEDRLQD--GVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMR 684 (1104)
Q Consensus 607 ~i~i~D~lr~--~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 684 (1104)
+++.+|+++| +++++++.|+++||+++|+|||+..+|..+++++||...-....+ +.+ ++....... ..
T Consensus 207 ~i~~~~~i~p~~~v~~~l~~lk~aGi~v~i~Tg~~~~~a~~il~~lgl~~~F~~~~i--~~~---~d~~~~~~~----~~ 277 (380)
T d1qyia_ 207 YIYQEIILRPVDEVKVLLNDLKGAGFELGIATGRPYTETVVPFENLGLLPYFEADFI--ATA---SDVLEAENM----YP 277 (380)
T ss_dssp TTTTCCBSSCHHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCGGGSCGGGE--ECH---HHHHHHHHH----ST
T ss_pred cccccccccchhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCcccCCcceE--Eec---chhhhhhhh----cc
Confidence 9999999776 999999999999999999999999999999999999653221011 111 111000000 00
Q ss_pred ccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcC
Q 001304 685 ITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKAD 764 (1104)
Q Consensus 685 ~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Ad 764 (1104)
......+. + .+. +.....++|.+|.+|..+++.++..++.|+|+|||.||++|.|.||
T Consensus 278 ~~~~~~KP-----~-----------p~~------~~~~~~~~~~~~~~k~~iv~~~~~~~~~~~~vGD~~~D~~aak~Ag 335 (380)
T d1qyia_ 278 QARPLGKP-----N-----------PFS------YIAALYGNNRDKYESYINKQDNIVNKDDVFIVGDSLADLLSAQKIG 335 (380)
T ss_dssp TSCCCCTT-----S-----------THH------HHHHHHCCCGGGHHHHHHCCTTCSCTTTEEEEESSHHHHHHHHHHT
T ss_pred ccccccCC-----C-----------hHH------HHHHHHHcCCCHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHCC
Confidence 00000000 0 000 1123457899999999999999999999999999999999999999
Q ss_pred ---ceEEecCCchHHHhh-----hcceecccchhhHHHH
Q 001304 765 ---IGVGISGREGLQAAR-----AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 765 ---vGIam~g~~~~~a~~-----~AD~vl~~f~~l~~ll 795 (1104)
|||+| |..++++++ .||+++.++..+..++
T Consensus 336 ~~~Igv~~-G~~g~~~~~el~~~~AD~ii~~~~el~~il 373 (380)
T d1qyia_ 336 ATFIGTLT-GLKGKDAAGELEAHHADYVINHLGELRGVL 373 (380)
T ss_dssp CEEEEESC-BTTBGGGHHHHHHTTCSEEESSGGGHHHHH
T ss_pred CCEEEEec-CCCCcccHHHHHhCCCCEEECCHHHHHHHH
Confidence 99988 655544332 6999999988887764
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.89 E-value=1.1e-23 Score=200.35 Aligned_cols=121 Identities=25% Similarity=0.342 Sum_probs=101.1
Q ss_pred CcEEEEEEeecccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHH
Q 001304 601 DLKVLGVTAIEDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVL 680 (1104)
Q Consensus 601 ~l~llG~i~i~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 680 (1104)
|.+..+.++++|++|++++++|+.|+++||++||+|||+..+|.++|++|||
T Consensus 9 d~~~~~~~g~~D~lr~~a~~~I~~L~~~Gi~v~ilTGD~~~~a~~ia~~lgI---------------------------- 60 (135)
T d2b8ea1 9 DKTGTLTKGKPDTLKESAKPAVQELKRMGIKVGMITGDNWRSAEAISRELNL---------------------------- 60 (135)
T ss_dssp ECCCCCBCSCCCCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTC----------------------------
T ss_pred CCceEEEEecCCCCCccHHHHHHHHHHcCCEEEEEcCcchhhhhHHHhhhhh----------------------------
Confidence 3444557899999999999999999999999999999999999999999998
Q ss_pred HHccccCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhh
Q 001304 681 LTMRITTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMI 760 (1104)
Q Consensus 681 ~~~~~~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml 760 (1104)
..++++++|++|..+|+.+|+. +.|+|+|||.||+|||
T Consensus 61 -----------------------------------------~~v~~~~~p~~k~~~v~~~q~~-~~v~~vGDg~nD~~aL 98 (135)
T d2b8ea1 61 -----------------------------------------DLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPAL 98 (135)
T ss_dssp -----------------------------------------SEEECSCCHHHHHHHHHHHTTT-SCEEEEECSSSSHHHH
T ss_pred -----------------------------------------hhhccccchhHHHHHHHHHHcC-CEEEEEeCCCCcHHHH
Confidence 3477899999999999999864 6899999999999999
Q ss_pred hhcCceEEecCCchHHHhhhcceecccchhhH
Q 001304 761 QKADIGVGISGREGLQAARAADYSIGKFRFLK 792 (1104)
Q Consensus 761 ~~AdvGIam~g~~~~~a~~~AD~vl~~f~~l~ 792 (1104)
++|||||+| ++...-++++||+++.+.++-.
T Consensus 99 ~~Advgia~-~~~~~~~~~aADivl~~~~l~~ 129 (135)
T d2b8ea1 99 AQADLGIAV-GSGSDVAVESGDIVLIRDDLRD 129 (135)
T ss_dssp HHSSEEEEE-CCC--------SEEESSCCTHH
T ss_pred HhCCeeeec-CccCHHHHHhCCEEEECCCHHH
Confidence 999999999 5544446669999999866543
|
| >d1wpga1 b.82.7.1 (A:125-239) Calcium ATPase, transduction domain A {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: Double-stranded beta-helix superfamily: Calcium ATPase, transduction domain A family: Calcium ATPase, transduction domain A domain: Calcium ATPase, transduction domain A species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.85 E-value=2.8e-22 Score=183.75 Aligned_cols=109 Identities=24% Similarity=0.293 Sum_probs=90.5
Q ss_pred EEEEEECCeE--EEEeccCCccceEEEEecCCcccceEEEEeccCCCccEEEEeccCCCCCCceEeeccccccCCCHhhh
Q 001304 102 EVWVVKQGIK--KLIQSQDIRVGNIVWLRENDEVPCDLVLIGTSDPQGVCYVETAALDGETDLKTRLIPAACMGMDFELL 179 (1104)
Q Consensus 102 ~~~V~r~g~~--~~i~~~~lvvGDIV~l~~g~~vPaD~~ll~ss~~~G~~~Vdes~LtGEs~~~~K~~~~~~~~~~~~~~ 179 (1104)
.++|+|+|++ ++|++++|+|||||.|++||+|||||+||... .+.++||||+|||||.|+.|.+...
T Consensus 2 ~~kV~R~g~~~v~~I~~~eLv~GDiv~l~~G~~vPaD~~ll~~~--~~~l~vdes~lTGEs~pv~K~~~~~--------- 70 (115)
T d1wpga1 2 MGKVYRADRKSVQRIKARDIVPGDIVEVAVGDKVPADIRILSIK--STTLRVDQSILTGESVSVIKHTEPV--------- 70 (115)
T ss_dssp EEEEEBSSCSSCEEEEGGGCCTTCEEEEETTCBCCSEEEEEEEC--SSCCEEECHHHHSCCSCEECCCSCC---------
T ss_pred ceEEEECCCceEEEEeHHHCCCCCEEEECCCCEEeeceEEEEee--ccceEEEEeecccceEEEEeecccc---------
Confidence 5799999985 78999999999999999999999999999643 2448999999999999999964211
Q ss_pred ccceeEEEecCCCcccccccceeeecCCCCCCCccccCcCceeeecceeccCceEEEEEEEecCcccccccc
Q 001304 180 HKIKGVIECPGPDKDIRRFDGNLRLLPPFIDNDVCPLTIKNTILQSCYLRNTEWACGVAVYTGNETKLGMTR 251 (1104)
Q Consensus 180 ~~~~~~i~~~~p~~~~~~f~g~~~l~~~~~~~~~~~l~~~n~l~~Gt~l~~~~~~~gvVv~tG~~T~~~~~~ 251 (1104)
.+......+..|++|+||.+.+| .++++|++||.+|.+|++.
T Consensus 71 -----------------------------~~~~~~~~~~~n~lf~GT~V~~G-~~~~~V~~tG~~T~~G~i~ 112 (115)
T d1wpga1 71 -----------------------------PDPRAVNQDKKNMLFSGTNIAAG-KALGIVATTGVSTEIGKIR 112 (115)
T ss_dssp -----------------------------CCTTCCGGGCTTEECTTCEEEEC-EEEEEEEECGGGSHHHHHH
T ss_pred -----------------------------cccccccccccceEEeccEEEee-eEEEEEEEEccccHHHHHH
Confidence 01112223568999999999998 7999999999999999764
|
| >d1wpga3 d.220.1.1 (A:361-599) Calcium ATPase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Calcium ATPase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.84 E-value=3e-22 Score=212.66 Aligned_cols=172 Identities=21% Similarity=0.236 Sum_probs=123.6
Q ss_pred CchHHHHHHHHhhhcccccccCCCCceeeecCCccHHHHHHHHHhcCcEEEeecCcEEE----EEeCCeeEEEEEEEEec
Q 001304 424 SPDVIRFLTVMAVCNTVIPAKSKAGAILYKAQSQDEEALVHAAAQLHMVLVNKNASILE----IKFNGSVLQYEILETLE 499 (1104)
Q Consensus 424 ~~~~~~~~~~lalc~~~~~~~~~~~~~~~~~~~p~e~Al~~~a~~~g~~~~~~~~~~~~----~~~~~~~~~~~il~~~~ 499 (1104)
.+.+.+++.++++||++....++.+......|+|+|.||+.+|.+.|+.........-. ......+..|++++.+|
T Consensus 47 ~~~l~~ll~~~~LCn~a~l~~~~~~~~~~~~G~pTE~ALl~~a~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p 126 (239)
T d1wpga3 47 FDGLVELATICALCNDSSLDFNETKGVYEKVGEATETALTTLVEKMNVFNTEVRNLSKVERANACNSVIRQLMKKEFTLE 126 (239)
T ss_dssp CHHHHHHHHHHHHSCSCEEEEETTTTEEEEESCHHHHHHHHHHHHHCTTCCCCSSSCHHHHTTHHHHHHHHHEEEEEEEE
T ss_pred cHHHHHHHHHHHhcCCCEeeecCCCCeEEEcCCCCcHHHHHHHHHhCCChHHhhccchhhhhccchhhhhhhCeEEEEee
Confidence 45678899999999998876554444456689999999999999998754321110000 00001135789999999
Q ss_pred cCCCCeeEEEEEEeCCCC----cEEEEecChHHhhhhhhcc-----------CCchhHHHHHHHHH--HhccceEEEEEE
Q 001304 500 FTSDRKRMSVVVKDCHSG----NISLLSKGADEAILPYAHA-----------GQQTRTFVEAVEQY--SQLGLRTLCLAW 562 (1104)
Q Consensus 500 F~s~rkrmsviv~~~~~~----~~~l~~KGa~e~i~~~~~~-----------~~~~~~~~~~~~~~--a~~GlR~l~~A~ 562 (1104)
|||+||||||+++.++++ .+.+|+|||||.|+++|.. ....+.+.+.++++ |++|+|||++||
T Consensus 127 F~S~rK~Msvv~~~~~~~~~~~~~~l~vKGApe~iL~~C~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~glRvLa~A~ 206 (239)
T d1wpga3 127 FSRDRKSMSVYCSPAKSSRAAVGNKMFVKGAPEGVIDRCNYVRVGTTRVPMTGPVKEKILSVIKEWGTGRDTLRCLALAT 206 (239)
T ss_dssp EETTTTEEEEEEEESSGGGGGGCSEEEEEECHHHHHHTEEEEEETTEEEECCHHHHHHHHHHHHHHTTSSCCCEEEEEEE
T ss_pred ecccccEEEEEEEcCCCCcccceeEEEEeCChHHHHHhccceecCCceeeCCHHHHHHHHHHHHHHhHhhCCCEEEEEEE
Confidence 999999999999986432 4789999999999999973 11234566777776 789999999999
Q ss_pred EecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEee
Q 001304 563 REVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAI 610 (1104)
Q Consensus 563 k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i 610 (1104)
|+++.++...+. .+. ...+.+|+||+|+|++||
T Consensus 207 k~~~~~~~~~~~----------~~~-----~~~~~~E~~L~flGlvgi 239 (239)
T d1wpga3 207 RDTPPKREEMVL----------DDS-----SRFMEYETDLTFVGVVGM 239 (239)
T ss_dssp ESSCCCGGGCCT----------TCG-----GGHHHHTCSEEEEEEEEE
T ss_pred EECCcccccccc----------cch-----hhHHHhcCCCEEEEEECC
Confidence 999865432110 010 012578999999999997
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.50 E-value=1e-13 Score=161.38 Aligned_cols=207 Identities=15% Similarity=0.204 Sum_probs=150.8
Q ss_pred hhhhhhhhhhHHHHhHhhhhHHHHHHHHHHHhhhccccchhhhHHHHHHHHHHhhhhhhhhhhccCCCCchhhccCCccc
Q 001304 798 HGRYSYNRTAFLSQYSFYKSLLICFIQIFFSFISGLSGTSLFNSVSLMAYNVFYTSIPVLVSTIDKDLSEGTVMQHPQIL 877 (1104)
Q Consensus 798 ~GR~~~~~i~~~i~~~~~k~~~~~~~~~~~~~~~~~~g~~~~~~~~ll~~nl~~~~lp~~~~~~~~~~~~~~~~~~p~~y 877 (1104)
.||.+|.|+.|.+.|.+..|+...+..++..++ ....++++.|++|+|++++.+|++++++| ++++++|++||
T Consensus 227 ~g~~~~~~~~k~i~~~l~~n~~~v~~~~~~~~l---~~p~pl~~~qILwinli~d~lpaiaL~~e--p~d~~iM~~~P-- 299 (472)
T d1wpga4 227 LGRAIYNNMKQFIRYLISSNVGEVVCIFLTAAL---GLPEALIPVQLLWVNLVTDGLPATALGFN--PPDLDIMDRPP-- 299 (472)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS---CCCCSCCHHHHHHHHHTTTHHHHHHHTTC--CCCSGGGGSCC--
T ss_pred HHHHHHHHhHHhhhhhhhhhHHHHHHHHHHHHc---CCCccccHHHHHHHHHHhHHHHHHHHhcC--CCchhhhcCCC--
Confidence 599999999999999999998776666665553 34568999999999999999999998888 59999999999
Q ss_pred cccccCcccCchhhHHHHHHHHHHHHHHHHHhhheeecccc------------------------------cceeeeehh
Q 001304 878 FYCQAGRLLNPSTFAGWFGRSLFHAIVAFVISIHVYAYEKS------------------------------EMEEVSMVA 927 (1104)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~------------------------------~~~~~~~~~ 927 (1104)
+++++.+++..+++.++..+++.++..+...++.+.+... ......+.+
T Consensus 300 -r~~~~~li~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~T~~ 378 (472)
T d1wpga4 300 -RSPKEPLISGWLFFRYMAIGGYVGAATVGAAAWWFMYAEDGPGVTYHQLTHFMQCTEDHPHFEGLDCEIFEAPEPMTMA 378 (472)
T ss_dssp -CCTTCCSSCTHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSSCCCTTSGGGGTTTTSSSTTTTCCSCGGGGGCHHHHHHH
T ss_pred -CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHhHHhhccCCcccccccchhhhhHhHHHHHH
Confidence 4778899999999888888888876665544433221100 000112334
Q ss_pred hhHH---HHHHHHhhhhcccc-c--hHHHHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHhcc-CHHHHHHHHHHHHHH
Q 001304 928 LSGC---IWLQAFVVALETNS-F--TVFQHLAIWGNLVAFYIINWIFSAIPSSGMYTIMFRLCS-QPSYWITMFLIVAAG 1000 (1104)
Q Consensus 928 ~~~~---~~~~~~~~~~~~~~-~--~~~~~~~i~~sii~~~i~~~~~~~vp~~~~~~~~~~~~~-~~~~w~~ill~~~~~ 1000 (1104)
|+.. .+++.++++....+ | ..+.|..+++++++.+++++++.++|..+ .++++.+ ++.+|+.++.+.+++
T Consensus 379 F~~lv~~q~~~~~~~rs~~~s~~~~~~~~N~~l~~av~i~~~l~~~i~yiP~l~---~vf~~~pL~~~~w~i~l~~~~~~ 455 (472)
T d1wpga4 379 LSVLVTIEMCNALNSLSENQSLMRMPPWVNIWLLGSICLSMSLHFLILYVDPLP---MIFKLKALDLTQWLMVLKISLPV 455 (472)
T ss_dssp HHHHHHHHHHHHHTTSCSSCCTTTSCGGGCHHHHHHHHHHHHHHHHHHHSTTTH---HHHTCCCCCHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHhcCCcchhhcCccccHHHHHHHHHHHHHHHHHHHhhHHH---HHHcccCCCHHHHHHHHHHHHHH
Confidence 4444 44444555544333 2 23466677777777777777778888766 3566654 899999999999999
Q ss_pred HHHHHHHHHHHHhhC
Q 001304 1001 MGPIVALKYFRYTYR 1015 (1104)
Q Consensus 1001 llp~~i~k~~~~~~~ 1015 (1104)
++..++.|++.|.|.
T Consensus 456 ~~~~El~K~~~R~~~ 470 (472)
T d1wpga4 456 IGLDEILKFIARNYL 470 (472)
T ss_dssp HHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHhhcCC
Confidence 999999999987653
|
| >d1wpga4 f.33.1.1 (A:1-124,A:240-343,A:751-994) Calcium ATPase, transmembrane domain M {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Membrane and cell surface proteins and peptides fold: Calcium ATPase, transmembrane domain M superfamily: Calcium ATPase, transmembrane domain M family: Calcium ATPase, transmembrane domain M domain: Calcium ATPase, transmembrane domain M species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=99.22 E-value=2.3e-12 Score=149.73 Aligned_cols=72 Identities=14% Similarity=0.090 Sum_probs=57.8
Q ss_pred hhhhhhhHHHHHHhhhccccchhHHHHHHHHHHHHHHhhhhcccCCCCCCCccccccccccccccceEEEEecCC--CCC
Q 001304 309 WYELLVIPLRFELLCSIMIPISIKVSLDLVKSLYAKFIDWDYEMIDPETDTPSHATNTAISEDLAQVEYILTDKT--GTL 386 (1104)
Q Consensus 309 ~~~~~~~~~~~~~l~~~~iP~~L~v~l~l~~~~~~~~i~~d~~m~~~~~~~~~~~~~~~~~E~Lg~v~~I~~DKT--GTL 386 (1104)
+.+.+..+++ +.+.+||++||+.++++.+..++ +|.+++ +++|+++++|++|+..++|+||| +||
T Consensus 177 ~~~~~~~ai~---l~V~~iPEgLp~~vti~La~~~~------rmak~~----~lVr~L~avE~~g~~~~~~~~k~i~~~l 243 (472)
T d1wpga4 177 AIYYFKIAVA---LAVAAIPEGLPAVITTCLALGTR------RMAKKN----AIVRSLPSVETLGRAIYNNMKQFIRYLI 243 (472)
T ss_dssp GGGHHHHHHH---HHHHHSCTTHHHHHHHHHHHHHH------HHHTTT----EEESCTTHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHHhChhhHHHHHHHHHHHHHH------HHHhcc----chhhhHHHHHHHHHHHHHHhHHhhhhhh
Confidence 4445544443 67889999999877777777766 676665 89999999999999999999998 999
Q ss_pred CCcceEE
Q 001304 387 TENRMIF 393 (1104)
Q Consensus 387 T~n~m~v 393 (1104)
|.|.+++
T Consensus 244 ~~n~~~v 250 (472)
T d1wpga4 244 SSNVGEV 250 (472)
T ss_dssp HHHHHHH
T ss_pred hhhHHHH
Confidence 9987654
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.14 E-value=7.3e-11 Score=123.01 Aligned_cols=175 Identities=15% Similarity=0.165 Sum_probs=104.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC--CCCeEEEecC-----CcHHHHHHHHHHHHHHccc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE--PKGQLLSIDG-----KTEDEVCRSLERVLLTMRI 685 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~ 685 (1104)
.+.+.+.++|++|+++|++++++||+....+..++...++..+- .++..+...+ ....+..............
T Consensus 19 ~i~~~~~~~l~~l~~~gi~v~~~TGR~~~~~~~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (230)
T d1wr8a_ 19 MIHEKALEAIRRAESLGIPIMLVTGNTVQFAEAASILIGTSGPVVAEDGGAISYKKKRIFLASMDEEWILWNEIRKRFPN 98 (230)
T ss_dssp CBCHHHHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHHTCCSCEEEGGGTEEEETTEEEESCCCSHHHHHHHHHHHHCTT
T ss_pred ccCHHHHHHHHHHHhCCCeEEEEeCCcHHHHHHHHHhcCCCcccccccceeeeccccccccccccHHHHHHHHHHHhccc
Confidence 47788999999999999999999999999999999998875330 0011111111 0111111111111111111
Q ss_pred c------CCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh----cCCeEEEEcCC
Q 001304 686 T------TSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDG 753 (1104)
Q Consensus 686 ~------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG 753 (1104)
. ...........+....+.+ +++.+++...........+.+++|. +|...++.+.+ ..+.|+++|||
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~iei~~~~~~K~~al~~l~~~~~i~~~~~~~iGD~ 177 (230)
T d1wr8a_ 99 ARTSYTMPDRRAGLVIMRETINVETV-REIINELNLNLVAVDSGFAIHVKKPWINKGSGIEKASEFLGIKPKEVAHVGDG 177 (230)
T ss_dssp CCBCTTGGGCSSCEEECTTTSCHHHH-HHHHHHTTCSCEEEECSSCEEEECTTCCHHHHHHHHHHHHTSCGGGEEEEECS
T ss_pred ccceeecccceeeEEEecccccHHHH-HHHHHHhccceEEeeCCcEEEEeeCCcCcchhhcccccccccchhheeeeecC
Confidence 0 1112222222233333322 2222222211111222344555554 78888887765 34679999999
Q ss_pred ccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 754 GNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 754 ~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
.||++|++.||+||+| +++.+.+++.||+|+...+
T Consensus 178 ~NDi~ml~~ag~~vav-~na~~~~k~~A~~v~~~~~ 212 (230)
T d1wr8a_ 178 ENDLDAFKVVGYKVAV-AQAPKILKENADYVTKKEY 212 (230)
T ss_dssp GGGHHHHHHSSEEEEC-TTSCHHHHTTCSEECSSCH
T ss_pred ccHHHHHHHCCeEEEE-CCCCHHHHHhCCEEECCCC
Confidence 9999999999999999 7888888889999997543
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=99.14 E-value=7.4e-11 Score=126.63 Aligned_cols=171 Identities=19% Similarity=0.245 Sum_probs=111.3
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC----------------cHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK----------------TEDEVCRSL 676 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~----------------~~~~~~~~~ 676 (1104)
++.+++.++|++|+++||+++++||++...+..+.+++++..+... ++..+|. ..+.... +
T Consensus 21 ~i~~~~~~al~~L~~~gi~v~i~TGR~~~~~~~~~~~l~l~~~~~~--~i~~nGa~i~~~~~~~~i~~~~~~~~~~~~-i 97 (271)
T d1rkqa_ 21 TISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDY--CITYNGALVQKAADGSTVAQTALSYDDYRF-L 97 (271)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEECSSCGGGTHHHHHHTTCCSTTCE--EEEGGGTEEEETTTCCEEEECCBCHHHHHH-H
T ss_pred ccCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHhcCcCCCcE--EEEcCceeEeccCCCeEEEeecccHHHHHH-H
Confidence 4778899999999999999999999999999999999998765321 2222221 1222221 1
Q ss_pred HHHHHHccc----------------------------------------cCCCCCceEEEEc-chhHHHHHHHHHHHHHh
Q 001304 677 ERVLLTMRI----------------------------------------TTSEPKDVAFVVD-GWALEIALKHYRKAFTE 715 (1104)
Q Consensus 677 ~~~~~~~~~----------------------------------------~~~~~~~~~lvi~-g~~l~~~~~~~~~~f~~ 715 (1104)
......... ...........++ ...++...+.+.+.+.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 177 (271)
T d1rkqa_ 98 EKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDEPAILDQAIARIPQEVKE 177 (271)
T ss_dssp HHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEECCGGGSCTTCCBCEEEEECCHHHHHHHHHHSCHHHHH
T ss_pred HHHHHhhcceEEEEecceEEeccccchhHHHHHHhhccCccccchhhhcCcccceEEEEEecCHHHHHHHHHHHHHHhhc
Confidence 111111000 0001112222333 33444444444444332
Q ss_pred -HhhhccceeeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 716 -LAILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 716 -l~~~~~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.........+.+++|. +|+..++.+.+. ...++++|||.||.+||+.|++||+| +|+..++++.||++...
T Consensus 178 ~~~~~~~~~~~~~i~p~~~~K~~al~~l~~~~~i~~~~ii~~GD~~ND~~ml~~~~~~~am-~na~~~lk~~a~~i~~~ 255 (271)
T d1rkqa_ 178 KYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAGVGVAV-DNAIPSVKEVANFVTKS 255 (271)
T ss_dssp HEEEEEEETTEEEEEETTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHCSEECCC
T ss_pred ceEEEEecCceEEecCCCCCcccccceehhhcccchhcEEEEeCcHhHHHHHHhCCcEEEe-CCCCHHHHHhCCEEcCC
Confidence 1122223345677887 699999988762 35799999999999999999999999 88888888999999874
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.09 E-value=8.1e-11 Score=126.21 Aligned_cols=174 Identities=17% Similarity=0.189 Sum_probs=109.8
Q ss_pred CCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC--CCCCeEEEec-------CCcHHHHHHHHHHHHHHccc
Q 001304 615 QDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP--EPKGQLLSID-------GKTEDEVCRSLERVLLTMRI 685 (1104)
Q Consensus 615 r~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~--~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 685 (1104)
.+.+.++|++|+++|++++++||++...+..+.+++++..+ ..++..+... ....++....+....+....
T Consensus 22 ~~~~~~~l~~l~~~gi~~~i~TGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 101 (269)
T d1rlma_ 22 QPRFMAQYQELKKRGIKFVVASGNQYYQLISFFPELKDEISFVAENGALVYEHGKQLFHGELTRHESRIVIGELLKDKQL 101 (269)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECSSCHHHHGGGCTTTTTTSEEEEGGGTEEEETTEEEEECCCCHHHHHHHHHHHHTCTTC
T ss_pred hHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccceEeeceeEEEECCcEEEEeccchHHHHHHHHHHHhhcCc
Confidence 35688999999999999999999999999988888876432 0011122212 22233443333333221100
Q ss_pred c---------------------------------------CCCCCceEEEEcchhHHHHHHHHHHHHHhH-hhhccceee
Q 001304 686 T---------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTEL-AILSRTAIC 725 (1104)
Q Consensus 686 ~---------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l-~~~~~~~i~ 725 (1104)
. .+...++.+......+....+.+...+... .......-+
T Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (269)
T d1rlma_ 102 NFVACGLQSAYVSENAPEAFVALMAKHYHRLKPVKDYQEIDDVLFKFSLNLPDEQIPLVIDKLHVALDGIMKPVTSGFGF 181 (269)
T ss_dssp EEEEEESSCEEEETTSCHHHHHHHHTTCSSEEEESCGGGCCSCEEEEEEECCGGGHHHHHHHHHHHTTTSSEEEECSTTE
T ss_pred eEEEEecCceEEecCCcHHHHHHHHhhcccccccccHhhhcchheEEEecCCHHHHHHHHHHHHHHhhcceEEEEEcCce
Confidence 0 000011222333344444444444433221 112223345
Q ss_pred eccChh--hHHHHHHHHHh-c---CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 726 CRVTPS--QKAQLVELLKS-C---DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 726 ~r~sP~--qK~~iV~~lk~-~---~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
.+++|. +|+..++.+.+ . .+.|+++|||.||.+||+.|+.||+| +|+..++++.||+++...+
T Consensus 182 ~di~p~~~sK~~al~~l~~~lgi~~~~vi~~GD~~ND~~Ml~~ag~~vam-~Na~~~lk~~A~~v~~~~~ 250 (269)
T d1rlma_ 182 IDLIIPGLHKANGISRLLKRWDLSPQNVVAIGDSGNDAEMLKMARYSFAM-GNAAENIKQIARYATDDNN 250 (269)
T ss_dssp EEEECTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHCSEEEEC-TTCCHHHHHHCSEECCCGG
T ss_pred EEEecCchHHHHHHHHHhhhhccccccEEEEcCCcchHHHHHhCCeEEEe-CCCCHHHHHhCCEEcCCCC
Confidence 688887 59999998876 2 35799999999999999999999999 8888889999999987533
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=99.08 E-value=3e-10 Score=122.71 Aligned_cols=65 Identities=25% Similarity=0.229 Sum_probs=55.6
Q ss_pred ceeeeccChh--hHHHHHHHHHhc----CCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 722 TAICCRVTPS--QKAQLVELLKSC----DYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 722 ~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
...+.+++|. +|+..++.+.+. .+.|+++|||.||.+||+.|+.||+| +|+.+++++.||++...
T Consensus 201 ~~~~ldi~~~~~~K~~ai~~l~~~~gi~~~~vi~~GD~~ND~~Ml~~a~~svam-~na~~~~k~~A~~v~~~ 271 (285)
T d1nrwa_ 201 AEHNFELSSRKASKGQALKRLAKQLNIPLEETAAVGDSLNDKSMLEAAGKGVAM-GNAREDIKSIADAVTLT 271 (285)
T ss_dssp STTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEEEESSGGGHHHHHHSSEEEEC-TTCCHHHHHHCSEECCC
T ss_pred CCcEEEEecccchhhhHHHHHHhhcccCcccEEEEeCCHHHHHHHHhCCeEEEe-CCCCHHHHHhCCEEcCC
Confidence 3345678887 799999988762 35799999999999999999999999 88888899999999874
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.01 E-value=6.6e-10 Score=115.54 Aligned_cols=170 Identities=16% Similarity=0.169 Sum_probs=108.2
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCC-------------cHHHHHHHHH
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGK-------------TEDEVCRSLE 677 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 677 (1104)
+.++.+++.+++++|++.|++++++||++...+..++...|+..+ ++..+|. ..+......+
T Consensus 18 ~~~i~~~~~~al~~l~~~g~~v~~~TGr~~~~~~~~~~~~~~~~~-----~i~~~G~~~~~~~~~~~~~~~~~~~~~~~~ 92 (225)
T d1l6ra_ 18 DRLISTKAIESIRSAEKKGLTVSLLSGNVIPVVYALKIFLGINGP-----VFGENGGIMFDNDGSIKKFFSNEGTNKFLE 92 (225)
T ss_dssp TSCBCHHHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHHTCCSC-----EEEGGGTEEECTTSCEEESSCSHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHHHCCCEEEEEcCCchhhhHHHHHHcCCCce-----EEeecceEEEeCCccEEEecChHHHHHHHH
Confidence 345778999999999999999999999999999999998887443 2222221 1111111111
Q ss_pred HHHHHccc-----cCCCCCceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChh--hHHHHHHHHHh-c---CCe
Q 001304 678 RVLLTMRI-----TTSEPKDVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPS--QKAQLVELLKS-C---DYR 746 (1104)
Q Consensus 678 ~~~~~~~~-----~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~--qK~~iV~~lk~-~---~~~ 746 (1104)
........ .........+..+....+.+.+...... ........+..+.|. +|+..++.+.+ . ...
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~i~~~~~~~~i~~~~~~K~~ai~~l~~~~~i~~~~ 169 (225)
T d1l6ra_ 93 EMSKRTSMRSILTNRWREASTGFDIDPEDVDYVRKEAESRG---FVIFYSGYSWHLMNRGEDKAFAVNKLKEMYSLEYDE 169 (225)
T ss_dssp HHTTTSSCBCCGGGGGCSSSEEEBCCGGGHHHHHHHHHTTT---EEEEEETTEEEEEETTCSHHHHHHHHHHHTTCCGGG
T ss_pred HHHHhcCcceeecccceeeeeccccCHHHHHHHHHHHhhcC---cEEEECCcEEEecCCccchHHHHHHHhhhhccchhh
Confidence 11111000 1111223444455555554443322111 111122334566665 79998887765 2 356
Q ss_pred EEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 747 TLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 747 v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
|+++|||.||.+|++.|++||+| +|+.+.+++.||+++...+
T Consensus 170 v~~~GDs~nD~~m~~~a~~~vav-~na~~~~k~~ad~v~~~~~ 211 (225)
T d1l6ra_ 170 ILVIGDSNNDMPMFQLPVRKACP-ANATDNIKAVSDFVSDYSY 211 (225)
T ss_dssp EEEECCSGGGHHHHTSSSEEEEC-TTSCHHHHHHCSEECSCCT
T ss_pred eeeecCCcchHHHHHHCCeEEEE-CCCcHHHHHhCCEEECCCC
Confidence 99999999999999999999999 7777788889999886543
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=98.97 E-value=8.5e-10 Score=117.99 Aligned_cols=174 Identities=11% Similarity=0.149 Sum_probs=108.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCC---CCCeEEEe--------cCCcHHHHHHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPE---PKGQLLSI--------DGKTEDEVCRSLERVLL 681 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~---~~~~~~~~--------~~~~~~~~~~~~~~~~~ 681 (1104)
.+.+.+.++|++++++| +++++||+++..+..+..+.+..... .+|..+.. ..-..+.+... .+...
T Consensus 19 ~i~~~~~~al~~l~~~~-~~~i~TGR~~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~i~~~~i~~~~~~~i-~~~~~ 96 (267)
T d1nf2a_ 19 EISEKDRRNIEKLSRKC-YVVFASGRMLVSTLNVEKKYFKRTFPTIAYNGAIVYLPEEGVILNEKIPPEVAKDI-IEYIK 96 (267)
T ss_dssp CCCHHHHHHHHHHTTTS-EEEEECSSCHHHHHHHHHHHSSSCCCEEEGGGTEEEETTTEEEEECCBCHHHHHHH-HHHHG
T ss_pred ccCHHHHHHHHHHHcCC-EEEEECCCChHHHHHHHHHhcccCCceeccCCeEEEecccccccccCCCHHHHHHH-HHHHH
Confidence 47788999999998755 79999999999999998887753321 01111111 11122222222 22222
Q ss_pred Hcccc----------------------------------------CCCCCceEEEEcchhHHHHHHHHHHHHHh-Hhhhc
Q 001304 682 TMRIT----------------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTE-LAILS 720 (1104)
Q Consensus 682 ~~~~~----------------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~-l~~~~ 720 (1104)
..... ........+..+...++.+.+.+.+.+.. +....
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 176 (267)
T d1nf2a_ 97 PLNVHWQAYIDDVLYSEKDNEEIKSYARHSNVDYRVEPNLSELVSKMGTTKLLLIDTPERLDELKEILSERFKDVVKVFK 176 (267)
T ss_dssp GGCCCEEEECSSCEEESSCCHHHHHHHHHTTCCEEECTTHHHHHHHHCBSEEEEECCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred hcCceEEEeeCceEEecCCcHHHHHHHHhcCCCceecCcHHHHhhhccceEEEEeccHHHHHHHHHHHHHhhCCcEEEEE
Confidence 11000 00011122222334445555555555543 22222
Q ss_pred cceeeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccch
Q 001304 721 RTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 721 ~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f~ 789 (1104)
....+.+++|. +|+..++.+.+ ....|+++|||.||.+||+.|++||+| +|+...+++.||+++.+.+
T Consensus 177 ~~~~~~di~~~~~~K~~ai~~l~~~~~i~~~~vva~GD~~ND~~ml~~~~~sva~-~na~~~~k~~A~~i~~~~~ 250 (267)
T d1nf2a_ 177 SFPTYLEIVPKNVDKGKALRFLRERMNWKKEEIVVFGDNENDLFMFEEAGLRVAM-ENAIEKVKEASDIVTLTNN 250 (267)
T ss_dssp EETTEEEEECTTCCHHHHHHHHHHHHTCCGGGEEEEECSHHHHHHHTTCSEEEEC-TTSCHHHHHHCSEECCCTT
T ss_pred eecceeeecCCCCchhHHHHHHHHhhccCcccEEEEcCCcchHHHHHhCCcEEEe-CCCCHHHHHhCCEEcCCCC
Confidence 34456678887 69999988865 235799999999999999999999999 8888889999999987543
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.95 E-value=1.3e-09 Score=112.62 Aligned_cols=131 Identities=21% Similarity=0.311 Sum_probs=92.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
+++|++.++|+.|+++|++++++||.....+..+++.+|+...+ ++. +..
T Consensus 82 ~l~pg~~~~i~~lk~~G~~~~ivS~~~~~~v~~i~~~lgi~~~~----v~a-n~~------------------------- 131 (217)
T d1nnla_ 82 HLTPGIRELVSRLQERNVQVFLISGGFRSIVEHVASKLNIPATN----VFA-NRL------------------------- 131 (217)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHTTCCGGG----EEE-ECE-------------------------
T ss_pred ccCHHHHHHHHHHHhCCCEEEEECCCchHHHHHHHHHhCCcccc----eee-eee-------------------------
Confidence 47899999999999999999999999999999999999984321 110 000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhc--CCeEEEEcCCccChhhhhhcCceEEec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSC--DYRTLAIGDGGNDVRMIQKADIGVGIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~--~~~v~~iGDG~ND~~ml~~AdvGIam~ 770 (1104)
.+..+|.. ...........+..|+.+++.+++. -+.++++|||.||++|++.||+|||+.
T Consensus 132 -~~~~~G~~-----------------~g~~~~~p~~~~~~K~~~v~~~~~~~~~~~~~~vGDs~~Di~~~~~ag~~va~~ 193 (217)
T d1nnla_ 132 -KFYFNGEY-----------------AGFDETQPTAESGGKGKVIKLLKEKFHFKKIIMIGDGATDMEACPPADAFIGFG 193 (217)
T ss_dssp -EECTTSCE-----------------EEECTTSGGGSTTHHHHHHHHHHHHHCCSCEEEEESSHHHHTTTTTSSEEEEEC
T ss_pred -eeeehhcc-----------------ccceeeeeeeccchHHHHHHHHHhccCccccEEEEeCHhhHHHHHhCCceEEEC
Confidence 00000000 0000000113456799999998763 357999999999999999999999995
Q ss_pred CCch-HHHhhhcceecccchhh
Q 001304 771 GREG-LQAARAADYSIGKFRFL 791 (1104)
Q Consensus 771 g~~~-~~a~~~AD~vl~~f~~l 791 (1104)
++.. .+.++.||+++.+|..|
T Consensus 194 ~~~~~~~~~~~ad~~i~~f~el 215 (217)
T d1nnla_ 194 GNVIRQQVKDNAKWYITDFVEL 215 (217)
T ss_dssp SSCCCHHHHHHCSEEESCGGGG
T ss_pred CCHHHHHHHHhCCCEeCCHHHh
Confidence 5543 45566899999887654
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=98.93 E-value=1.5e-09 Score=116.79 Aligned_cols=174 Identities=14% Similarity=0.125 Sum_probs=108.2
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC---C-------------CCCeEEEecCCcHHHHHHHH
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP---E-------------PKGQLLSIDGKTEDEVCRSL 676 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~---~-------------~~~~~~~~~~~~~~~~~~~~ 676 (1104)
++.+.+.++|++|+++|++++++||++...+..++.++++... . ..+..+.............+
T Consensus 28 ~i~~~~~~al~~l~~~Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (283)
T d2b30a1 28 KVPSENIDAIKEAIEKGYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYINGTIVYDQIGYTLLDETIETDVYAELI 107 (283)
T ss_dssp CSCHHHHHHHHHHHHHTCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGGTEEECTTCCEEEECCCCHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCcccccccCCceEEEeeeEEEcCCCcEeeecccCHHHHHHHH
Confidence 4778899999999999999999999999999888877653110 0 00112222222223333222
Q ss_pred HHHHHHc---cc---c-----------------------------------CCCCCceEEEEcchhHHHHHHHHHHHHHh
Q 001304 677 ERVLLTM---RI---T-----------------------------------TSEPKDVAFVVDGWALEIALKHYRKAFTE 715 (1104)
Q Consensus 677 ~~~~~~~---~~---~-----------------------------------~~~~~~~~lvi~g~~l~~~~~~~~~~f~~ 715 (1104)
+.....- .. . ........+..+...++.+.+.+.+.+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (283)
T d2b30a1 108 SYLVEKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIRHNEMLKYRTMNKLMIVLDPSESKTVIGNLKQKFKN 187 (283)
T ss_dssp HHHHHTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEECHHHHTTCCCCSEEEECCCTTTHHHHHHHHHHHSTT
T ss_pred HHHHhhcccceEEEEecceeEEeccchHHHHHHHHhhccccccccHHHHhhcccceEEEEecCHHHHHHHHHHHHHHhcc
Confidence 2211110 00 0 00011222233444556666655555432
Q ss_pred Hh-hhccceeeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceeccc
Q 001304 716 LA-ILSRTAICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGK 787 (1104)
Q Consensus 716 l~-~~~~~~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~ 787 (1104)
.. .......+.+++|. .|+..++.+.+ ..+.|+++|||.||.+||+.||+||+| +++..++++.||+++..
T Consensus 188 ~~~~~~~~~~~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi~~GD~~ND~~Ml~~a~~~va~-~na~~~~k~~a~~v~~~ 265 (283)
T d2b30a1 188 KLTIFTTYNGHAEVTKLGHDKYTGINYLLKHYNISNDQVLVVGDAENDIAMLSNFKYSFAV-ANATDSAKSHAKCVLPV 265 (283)
T ss_dssp TEEEEECTTSCEEEEETTCCHHHHHHHHHHHTTCCGGGEEEEECSGGGHHHHHSCSEEEEC-TTCCHHHHHHSSEECSS
T ss_pred cceEEEecceeEeecCCcchhHHHHHHHhhhcccccceEEEecCChhhHHHHHhCCcEEEe-CCCCHHHHHhCCEEECC
Confidence 11 11222334566775 68888887765 246899999999999999999999999 88888899999999863
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=98.87 E-value=1.7e-09 Score=114.99 Aligned_cols=65 Identities=31% Similarity=0.473 Sum_probs=55.0
Q ss_pred eeeeccChh--hHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchHHHhhhcceecccc
Q 001304 723 AICCRVTPS--QKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGLQAARAADYSIGKF 788 (1104)
Q Consensus 723 ~i~~r~sP~--qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl~~f 788 (1104)
..+.++.|. .|+..++.+.+ ..+.++++|||.||++||+.|+.||+| +|+.+.+++.||++....
T Consensus 175 ~~~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a~GD~~ND~~Ml~~a~~svav-~na~~~lk~~A~~vt~~~ 245 (260)
T d2rbka1 175 PAFADVTAKGDTKQKGIDEIIRHFGIKLEETMSFGDGGNDISMLRHAAIGVAM-GQAKEDVKAAADYVTAPI 245 (260)
T ss_dssp TTCCEEESTTCSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCHHHHHHSSEECCCG
T ss_pred CcEEEEEeCCCCHHHHHHHHHHhccccHhheeEecCCcccHHHHHhCCeEEEe-CCCCHHHHHhCCEEeCCC
Confidence 345777886 69999988865 346799999999999999999999999 888888999999987653
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.78 E-value=9.6e-09 Score=101.34 Aligned_cols=112 Identities=18% Similarity=0.167 Sum_probs=84.3
Q ss_pred HHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCceEEEEcc
Q 001304 620 ETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDVAFVVDG 699 (1104)
Q Consensus 620 ~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvi~g 699 (1104)
.+|+.|++.|+.+.++||+....+...+.++++..
T Consensus 39 ~gi~~l~~~gi~~~iis~~~~~~v~~~~~~l~~~~--------------------------------------------- 73 (177)
T d1k1ea_ 39 LGIKMLMDADIQVAVLSGRDSPILRRRIADLGIKL--------------------------------------------- 73 (177)
T ss_dssp HHHHHHHHTTCEEEEEESCCCHHHHHHHHHHTCCE---------------------------------------------
T ss_pred HHHHHHhhhcEEEEEecCCchhHHHHHHhhhcccc---------------------------------------------
Confidence 48999999999999999999999999999988721
Q ss_pred hhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHh----cCCeEEEEcCCccChhhhhhcCceEEecCCchH
Q 001304 700 WALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKS----CDYRTLAIGDGGNDVRMIQKADIGVGISGREGL 775 (1104)
Q Consensus 700 ~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~----~~~~v~~iGDG~ND~~ml~~AdvGIam~g~~~~ 775 (1104)
++. ...+|...++.+.+ ..+.|+++||+.||.+||+.|++|+++ +++..
T Consensus 74 ------------------------~~~--~~~~K~~~l~~~~~~~~i~~~~v~~vGDd~nDl~~l~~~g~siap-~nA~~ 126 (177)
T d1k1ea_ 74 ------------------------FFL--GKLEKETACFDLMKQAGVTAEQTAYIGDDSVDLPAFAACGTSFAV-ADAPI 126 (177)
T ss_dssp ------------------------EEE--SCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEC-TTSCH
T ss_pred ------------------------ccc--ccccHHHHHHHHHHHhcCCcceeEEecCCccHHHHHhhCCeEEEc-CCccH
Confidence 011 12234444443332 347899999999999999999999999 88888
Q ss_pred HHhhhcceeccc------chhhHHHH-Hhhhhhhh
Q 001304 776 QAARAADYSIGK------FRFLKRLI-LVHGRYSY 803 (1104)
Q Consensus 776 ~a~~~AD~vl~~------f~~l~~ll-l~~GR~~~ 803 (1104)
.+++.||||+.. .+-+..++ -.+|+|.+
T Consensus 127 ~vk~~A~~Vt~~~GG~GavrE~~e~il~~~~~~~~ 161 (177)
T d1k1ea_ 127 YVKNAVDHVLSTHGGKGAFREMSDMILQAQGKSSV 161 (177)
T ss_dssp HHHTTSSEECSSCTTTTHHHHHHHHHHHHTTCTHH
T ss_pred HHHHhCCEEeCCCCCCchHHHHHHHHHHHCCChHH
Confidence 899999999964 22233333 35677654
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=98.77 E-value=7.9e-09 Score=108.17 Aligned_cols=44 Identities=11% Similarity=0.083 Sum_probs=39.4
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
.+...+.++++|++|+++|++++++|||+...+..+.+++++..
T Consensus 15 ~~~~~~~~~~ai~~l~~~G~~~~~aTGR~~~~~~~~~~~~~~~~ 58 (243)
T d1wzca1 15 PGYEPDPAKPIIEELKDMGFEIIFNSSKTRAEQEYYRKELEVET 58 (243)
T ss_dssp SSSCSGGGHHHHHHHHHTTEEEEEECSSCHHHHHHHHHHHTCCS
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHhcccc
Confidence 45556789999999999999999999999999999999999743
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=98.71 E-value=8.1e-08 Score=99.27 Aligned_cols=41 Identities=7% Similarity=0.067 Sum_probs=38.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
.+.+.++++|++|+++|++++++|||+...+..+..++++-
T Consensus 21 ~i~~~~~~al~~l~~~Gi~~~i~TGR~~~~~~~~~~~~~~~ 61 (232)
T d1xvia_ 21 YDWQPAAPWLTRLREANVPVILCSSKTSAEMLYLQKTLGLQ 61 (232)
T ss_dssp CSCCTTHHHHHHHHHTTCCEEEECSSCHHHHHHHHHHTTCT
T ss_pred cCCHHHHHHHHHHHHCCCEEEEEeCCChhhchhHHHHhccC
Confidence 47789999999999999999999999999999999999974
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=98.49 E-value=9.4e-08 Score=100.05 Aligned_cols=166 Identities=14% Similarity=0.186 Sum_probs=95.6
Q ss_pred HHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCC----CCeEEEecCCcHHHHHHHH---------HHHHHHccc
Q 001304 619 PETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEP----KGQLLSIDGKTEDEVCRSL---------ERVLLTMRI 685 (1104)
Q Consensus 619 ~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~----~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 685 (1104)
.+++.++++.|+.+.++||++...+..+.++.++..++. ++..+.............+ ....+....
T Consensus 24 ~~~~~~~~~~g~~v~i~TGR~~~~~~~~~~~~~~~~~~~~i~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (244)
T d1s2oa1 24 LQEYLGDRRGNFYLAYATGRSYHSARELQKQVGLMEPDYWLTAVGSEIYHPEGLDQHWADYLSEHWQRDILQAIADGFEA 103 (244)
T ss_dssp HHHHHHTTGGGEEEEEECSSCHHHHHHHHHHHTCCCCSEEEETTTTEEEETTEECHHHHHHHHTTCCHHHHHHHHHTCTT
T ss_pred HHHHHHHHcCCCEEEEECCCCHHHHHHHHHHcCCCCCceEEeccceEEEEccCcchHHHHHHHHHHhHHHHHHHHhhccc
Confidence 345666788899999999999999999999999865521 1112222111111111111 111111100
Q ss_pred ------cCCCCCceEEEEcchhHHHHHHHHHHHHHhH----hhhccceeeeccChh--hHHHHHHHHHhc----CCeEEE
Q 001304 686 ------TTSEPKDVAFVVDGWALEIALKHYRKAFTEL----AILSRTAICCRVTPS--QKAQLVELLKSC----DYRTLA 749 (1104)
Q Consensus 686 ------~~~~~~~~~lvi~g~~l~~~~~~~~~~f~~l----~~~~~~~i~~r~sP~--qK~~iV~~lk~~----~~~v~~ 749 (1104)
.............-.......+...+.+... .......-+.++.|. +|+..++.+.+. ...|++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~ 183 (244)
T d1s2oa1 104 LKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKDVDLLPQRSNKGNATQYLQQHLAMEPSQTLV 183 (244)
T ss_dssp EEECCGGGCBTTBEEEEECTTSCTHHHHHHHHHHHTSSCCEEEEEETTTEEEEEETTCSHHHHHHHHHHHTTCCGGGEEE
T ss_pred ccccChhhhcceEEEEeccccccHHHHHHHHHHHHhhcccceeeecCCcEEEEEeCccchhHHHHHHHHhccCChhhEEE
Confidence 0111122222222222222233333332221 111111223556665 699999988763 256999
Q ss_pred EcCCccChhhhhhcCceEEecCCchHHHhhhcceec
Q 001304 750 IGDGGNDVRMIQKADIGVGISGREGLQAARAADYSI 785 (1104)
Q Consensus 750 iGDG~ND~~ml~~AdvGIam~g~~~~~a~~~AD~vl 785 (1104)
+|||.||.+||+.||.||+| +|+...+++.||.+.
T Consensus 184 ~GD~~ND~~Ml~~~~~~vav-~na~~~lk~~a~~~~ 218 (244)
T d1s2oa1 184 CGDSGNDIGLFETSARGVIV-RNAQPELLHWYDQWG 218 (244)
T ss_dssp EECSGGGHHHHTSSSEEEEC-TTCCHHHHHHHHHHC
T ss_pred EcCCCCCHHHHhhCCcEEEe-CCCCHHHHHHhhccc
Confidence 99999999999999999999 888888888888544
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.46 E-value=1.1e-07 Score=98.04 Aligned_cols=136 Identities=14% Similarity=0.139 Sum_probs=93.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|++.+.++.|+++|+++.++||-....+..+.+.+|+...-.. ....+++....
T Consensus 75 ~l~pg~~~~l~~L~~~g~~~~ivS~~~~~~i~~~l~~l~~~~~~~a-n~~~~~~~~~~---------------------- 131 (226)
T d2feaa1 75 KIREGFREFVAFINEHEIPFYVISGGMDFFVYPLLEGIVEKDRIYC-NHASFDNDYIH---------------------- 131 (226)
T ss_dssp CBCTTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHTTTSCGGGEEE-EEEECSSSBCE----------------------
T ss_pred chhHHHHHHHHHHHhcccccccCCcchhhhHHHHHHHcCCccceee-eeEEEeCCcce----------------------
Confidence 4789999999999999999999999999999999998887432000 00001100000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
..+ .......+....|..|..+++.++..++.|+++||+.||++|++.||+++++ +.
T Consensus 132 ----~~~------------------~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~i~iGDs~~Dl~~a~~A~~~~a~-~~ 188 (226)
T d2feaa1 132 ----IDW------------------PHSCKGTCSNQCGCCKPSVIHELSEPNQYIIMIGDSVTDVEAAKLSDLCFAR-DY 188 (226)
T ss_dssp ----EEC------------------TTCCCTTCCSCCSSCHHHHHHHHCCTTCEEEEEECCGGGHHHHHTCSEEEEC-HH
T ss_pred ----ecc------------------ccccccccccCCHHHHHHHHHHhcCCCceEEEEeCchhhHHHHHHCCEEEEe-cc
Confidence 000 0011233456688889999999988889999999999999999999999998 44
Q ss_pred chHHHhh-hc-ceecccchhhHHH
Q 001304 773 EGLQAAR-AA-DYSIGKFRFLKRL 794 (1104)
Q Consensus 773 ~~~~a~~-~A-D~vl~~f~~l~~l 794 (1104)
-...+.+ .. ...+.+|+.+...
T Consensus 189 ~~~~~~~~~~~~~~~~d~~~i~~~ 212 (226)
T d2feaa1 189 LLNECREQNLNHLPYQDFYEIRKE 212 (226)
T ss_dssp HHHHHHHTTCCEECCSSHHHHHHH
T ss_pred hHHHHHHcCCCeeecCCHHHHHHH
Confidence 4444444 23 3445566655443
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=98.46 E-value=4.1e-07 Score=91.82 Aligned_cols=127 Identities=23% Similarity=0.227 Sum_probs=85.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
+..++....++.+ +.+.++.++|+.........+...++...... ......
T Consensus 69 ~~~~~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~--~l~~~~-------------------------- 119 (206)
T d1rkua_ 69 KPLEGAVEFVDWL-RERFQVVILSDTFYEFSQPLMRQLGFPTLLCH--KLEIDD-------------------------- 119 (206)
T ss_dssp CCCTTHHHHHHHH-HTTSEEEEEEEEEHHHHHHHHHHTTCCCEEEE--EEEECT--------------------------
T ss_pred cccchHHHHHHHh-hcCceEEEeccCchHHHHHHHHHhCCchhhcc--eeeeec--------------------------
Confidence 4566777777665 57899999999999888888888887432111 000000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEecCC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGISGR 772 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~g~ 772 (1104)
...........+..+...++.++...+.|+|+|||.||++||+.||+|||| ++
T Consensus 120 --------------------------~~~~~~~~~~~~~~~~~~~~~~~i~~~eviaiGDg~NDi~Ml~~Ag~gIAm-na 172 (206)
T d1rkua_ 120 --------------------------SDRVVGYQLRQKDPKRQSVIAFKSLYYRVIAAGDSYNDTTMLSEAHAGILF-HA 172 (206)
T ss_dssp --------------------------TSCEEEEECCSSSHHHHHHHHHHHTTCEEEEEECSSTTHHHHHHSSEEEEE-SC
T ss_pred --------------------------ccccccccccchhhHHHHHHHhcccccceEEecCCccCHHHHHhCCccEEE-CC
Confidence 001122223344455667777877889999999999999999999999999 54
Q ss_pred chHHHhh-hcceecc-cchhhHHHHH
Q 001304 773 EGLQAAR-AADYSIG-KFRFLKRLIL 796 (1104)
Q Consensus 773 ~~~~a~~-~AD~vl~-~f~~l~~lll 796 (1104)
. .++++ ++||+.. +++.+...++
T Consensus 173 ~-~~v~~~~~~~~~~~~~~d~~~~~~ 197 (206)
T d1rkua_ 173 P-ENVIREFPQFPAVHTYEDLKREFL 197 (206)
T ss_dssp C-HHHHHHCTTSCEECSHHHHHHHHH
T ss_pred C-HHHHHhCCCceeecCHHHHHHHHH
Confidence 4 45555 7899764 5666665543
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.29 E-value=8.4e-07 Score=89.67 Aligned_cols=124 Identities=21% Similarity=0.221 Sum_probs=82.1
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
.++.+++.+.++.++..|..+.++||.....+.....+.+....-.. ....+..
T Consensus 74 ~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~------------------------ 127 (210)
T d1j97a_ 74 ITPTEGAEETIKELKNRGYVVAVVSGGFDIAVNKIKEKLGLDYAFAN--RLIVKDG------------------------ 127 (210)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHHHTCSEEEEE--EEEEETT------------------------
T ss_pred hhhhhhHHHHHHHHHHcCCEEEeecccccccccchhhccchhhhhhh--hhccccc------------------------
Confidence 47889999999999999999999999999999888888776321100 0000000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHH----HhcCCeEEEEcCCccChhhhhhcCceE
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELL----KSCDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~l----k~~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
. ........-..+..|...+..+ +...+.++++|||.||++|++.||+||
T Consensus 128 ~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iGDs~nDi~m~~~ag~~v 181 (210)
T d1j97a_ 128 K--------------------------LTGDVEGEVLKENAKGEILEKIAKIEGINLEDTVAVGDGANDISMFKKAGLKI 181 (210)
T ss_dssp E--------------------------EEEEEECSSCSTTHHHHHHHHHHHHHTCCGGGEEEEESSGGGHHHHHHCSEEE
T ss_pred c--------------------------ccccccccccccccccchhhhHHHHhcccccceEEecCCcChHHHHHHCCCCE
Confidence 0 0000000011122233333333 334567999999999999999999999
Q ss_pred EecCCchHHHhhhcceecccch
Q 001304 768 GISGREGLQAARAADYSIGKFR 789 (1104)
Q Consensus 768 am~g~~~~~a~~~AD~vl~~f~ 789 (1104)
|| ++...+++.||+++...+
T Consensus 182 a~--na~~~lk~~Ad~vi~~~d 201 (210)
T d1j97a_ 182 AF--CAKPILKEKADICIEKRD 201 (210)
T ss_dssp EE--SCCHHHHTTCSEEECSSC
T ss_pred EE--CCCHHHHHhCCEEEcCCC
Confidence 99 344567889999997544
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=98.22 E-value=6.5e-07 Score=92.00 Aligned_cols=66 Identities=12% Similarity=0.225 Sum_probs=50.9
Q ss_pred cceeeeccChh--hHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEec-CCchHHHhhhcceecccchhh
Q 001304 721 RTAICCRVTPS--QKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGIS-GREGLQAARAADYSIGKFRFL 791 (1104)
Q Consensus 721 ~~~i~~r~sP~--qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam~-g~~~~~a~~~AD~vl~~f~~l 791 (1104)
....+.+++|. +|+..++.+.+. ..++++||+.||.+||+.|+.|++|. |+. ...|++.+.+-...
T Consensus 146 ~~~~~idi~p~g~~Kg~al~~l~~~-~~~i~~GDs~ND~~Mf~~~~~~~av~~g~~----~~~A~~~~~~~~ev 214 (229)
T d1u02a_ 146 YGKMIIELRVPGVNKGSAIRSVRGE-RPAIIAGDDATDEAAFEANDDALTIKVGEG----ETHAKFHVADYIEM 214 (229)
T ss_dssp ECSSEEEEECTTCCHHHHHHHHHTT-SCEEEEESSHHHHHHHHTTTTSEEEEESSS----CCCCSEEESSHHHH
T ss_pred eeceEEEEecCCCCHHHHHHHHhcc-ccceeecCCCChHHHHhccCCeEEEEeCCC----CccCeEEcCCHHHH
Confidence 34456788887 699999999865 56889999999999999998877662 332 34789998765443
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.00 E-value=1.1e-06 Score=90.91 Aligned_cols=64 Identities=19% Similarity=0.244 Sum_probs=52.5
Q ss_pred ceeeeccChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcC-ceEEecCCchHHHhhhcceecc
Q 001304 722 TAICCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYSIG 786 (1104)
Q Consensus 722 ~~i~~r~sP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~AD~vl~ 786 (1104)
...+.+++|. +|+..++.|.+ ..+.|+++|| |.||.+||+.|+ .|+|| +|+...++..+|+++.
T Consensus 173 ~~~~lei~~~~vsKg~al~~L~~~~~~ev~afGD~~~~G~ND~eml~~a~~~~~av-~na~~~~k~~~~~~~~ 244 (244)
T d2fuea1 173 GMISFDVFPEGWDKRYCLDSLDQDSFDTIHFFGNETSPGGNDFEIFADPRTVGHSV-VSPQDTVQRCREIFFP 244 (244)
T ss_dssp SSSCEEEEETTCSTTHHHHHHTTSCCSEEEEEESCCSTTSTTHHHHHSTTSEEEEC-SSHHHHHHHHHHHHCT
T ss_pred cCccceecchhccHHHHHHHHhcCChhhEEEEcCCCCCCCCcHHHHHcCCCcEEEc-CCHHHHHHHHHHhcCC
Confidence 3345678887 69999999876 4568999999 569999999997 69999 8887778889998763
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.48 E-value=2.8e-05 Score=79.87 Aligned_cols=59 Identities=20% Similarity=0.318 Sum_probs=43.6
Q ss_pred eeeccChh--hHHHHHHHHHh-cCCeEEEEcC----CccChhhhhhcC-ceEEecCCchHHHhhhccee
Q 001304 724 ICCRVTPS--QKAQLVELLKS-CDYRTLAIGD----GGNDVRMIQKAD-IGVGISGREGLQAARAADYS 784 (1104)
Q Consensus 724 i~~r~sP~--qK~~iV~~lk~-~~~~v~~iGD----G~ND~~ml~~Ad-vGIam~g~~~~~a~~~AD~v 784 (1104)
.+.+++|. +|+..++.|.+ ..+.|+++|| |.||.+||+.|+ .|+++ ++..++++.+|.+
T Consensus 175 ~~lei~~~~vsKg~al~~l~~~~~~ev~afGD~~~~g~NDi~Ml~~~g~~~~~v--~~~~~~~~~~~~l 241 (243)
T d2amya1 175 ISFDVFPDGWDKRYCLRHVENDGYKTIYFFGDKTMPGGNDHEIFTDPRTMGYSV--TAPEDTRRICELL 241 (243)
T ss_dssp TEEEEEETTCSGGGGGGGTTTSCCSEEEEEECSCC---CCCHHHHCTTEEEEEC--SSHHHHHHHHHHH
T ss_pred ccceeeccccCHHHHHHHHhCCCcceEEEEcCCCCCCCCcHHHHHccCCcEEEe--CCHHHHHHHHHHH
Confidence 35567776 69988887765 4578999999 889999999998 67777 3366777776643
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=97.40 E-value=9.3e-05 Score=74.96 Aligned_cols=124 Identities=20% Similarity=0.241 Sum_probs=82.8
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.++++++++.|++.|+++.++||.....+..+..++||...-.. ++...
T Consensus 95 ~l~~~~~~~L~~L~~~g~~~~i~tn~~~~~~~~~l~~~gl~~~f~~--~~~~~--------------------------- 145 (224)
T d2hsza1 95 RLYPNVKETLEALKAQGYILAVVTNKPTKHVQPILTAFGIDHLFSE--MLGGQ--------------------------- 145 (224)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHTTCGGGCSE--EECTT---------------------------
T ss_pred chHHHHHHHHHHHhccCCcccccccccHHHHHHHHHhcCchhhccc--ccccc---------------------------
Confidence 4689999999999999999999999999999999999998432110 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc-eEEec-
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGIS- 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIam~- 770 (1104)
..-...-.|+--..+.+.++-....+++|||+.+|+.+-+.|++ .|++.
T Consensus 146 -----------------------------~~~~~kp~p~~~~~~~~~~~~~~~~~~~igD~~~Di~~A~~aG~~~i~v~~ 196 (224)
T d2hsza1 146 -----------------------------SLPEIKPHPAPFYYLCGKFGLYPKQILFVGDSQNDIFAAHSAGCAVVGLTY 196 (224)
T ss_dssp -----------------------------TSSSCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEEESS
T ss_pred -----------------------------ccccccccchhhHHHHHHhhhhhhccchhcCcHHHHHHHHHcCCeEEEEeC
Confidence 00000112222233444444456789999999999999999997 44552
Q ss_pred C-CchHHHhh-hcceecccchhhHHH
Q 001304 771 G-REGLQAAR-AADYSIGKFRFLKRL 794 (1104)
Q Consensus 771 g-~~~~~a~~-~AD~vl~~f~~l~~l 794 (1104)
| +....... .+|+++.+++.|..+
T Consensus 197 g~~~~~~l~~~~~d~~v~~l~dL~~i 222 (224)
T d2hsza1 197 GYNYNIPIAQSKPDWIFDDFADILKI 222 (224)
T ss_dssp SCSTTCCGGGGCCSEEESSGGGGGGG
T ss_pred CCCCcchhhhcCCCEEECCHHHHHHh
Confidence 1 11112233 589999988877654
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=97.36 E-value=0.00023 Score=71.70 Aligned_cols=122 Identities=13% Similarity=0.100 Sum_probs=80.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|++.++++.|+++|+++.++||.....+..+.+..|+...-.. ++..+
T Consensus 88 ~~~pg~~~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~~~l~~~F~~--i~~~~--------------------------- 138 (218)
T d1te2a_ 88 PLLPGVREAVALCKEQGLLVGLASASPLHMLEKVLTMFDLRDSFDA--LASAE--------------------------- 138 (218)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEECT---------------------------
T ss_pred cccchHHHHHHHhhhccccccccccccccccccccccccccccccc--ccccc---------------------------
Confidence 3569999999999999999999999999999999999998422110 11100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-EecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am~g 771 (1104)
..-.++-.|+-=..+++.+.-..+.+++|||+.+|+.|-+.|++.. ++.+
T Consensus 139 -----------------------------~~~~~Kp~~~~~~~~~~~l~~~~~~~l~igD~~~di~aA~~~G~~~i~v~~ 189 (218)
T d1te2a_ 139 -----------------------------KLPYSKPHPQVYLDCAAKLGVDPLTCVALEDSVNGMIASKAARMRSIVVPA 189 (218)
T ss_dssp -----------------------------TSSCCTTSTHHHHHHHHHHTSCGGGEEEEESSHHHHHHHHHTTCEEEECCC
T ss_pred -----------------------------ccccchhhHHHHHHHHHHcCCCchhcEEEeeCHHHHHHHHHcCCEEEEECC
Confidence 0000111112122344444445578999999999999999999755 4422
Q ss_pred Cch-HHH-hhhcceecccchhhH
Q 001304 772 REG-LQA-ARAADYSIGKFRFLK 792 (1104)
Q Consensus 772 ~~~-~~a-~~~AD~vl~~f~~l~ 792 (1104)
... .+. ...||+++.++..|.
T Consensus 190 ~~~~~~~~~~~a~~~i~~l~el~ 212 (218)
T d1te2a_ 190 PEAQNDPRFVLANVKLSSLTELT 212 (218)
T ss_dssp TTTTTCGGGGGSSEECSCGGGCC
T ss_pred CCCccchhhcCCCEEECChhhCC
Confidence 221 122 236899999887663
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=97.29 E-value=0.0003 Score=71.54 Aligned_cols=124 Identities=18% Similarity=0.169 Sum_probs=81.0
Q ss_pred cCCCChHHHHHHHHHcC-CeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 613 RLQDGVPETIETLRKAG-INFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aG-I~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
++-+|+.++++.|++.| +++.++||.....+..+.+..|+...-.. ++.-+
T Consensus 91 ~~~~g~~~~L~~L~~~g~~~~~v~t~~~~~~~~~~l~~~gl~~~fd~--i~~~~-------------------------- 142 (228)
T d2hcfa1 91 TLLEGVRELLDALSSRSDVLLGLLTGNFEASGRHKLKLPGIDHYFPF--GAFAD-------------------------- 142 (228)
T ss_dssp EECTTHHHHHHHHHTCTTEEEEEECSSCHHHHHHHHHTTTCSTTCSC--EECTT--------------------------
T ss_pred eecCchHHHHhhhhccccccccccCCCcchhhhhhhhhhcccccccc--ccccc--------------------------
Confidence 45689999999999987 89999999999999999999998543211 11000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeecc-ChhhHHHHHHHHHh---cCCeEEEEcCCccChhhhhhcCceE
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRV-TPSQKAQLVELLKS---CDYRTLAIGDGGNDVRMIQKADIGV 767 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~-sP~qK~~iV~~lk~---~~~~v~~iGDG~ND~~ml~~AdvGI 767 (1104)
....+- .|.--...++.+.. ..+.++||||+.+|+.|-+.|++..
T Consensus 143 -------------------------------~~~~~k~~p~~~~~~~~~~~~~~~~p~~~l~VGD~~~Di~aA~~aG~~~ 191 (228)
T d2hcfa1 143 -------------------------------DALDRNELPHIALERARRMTGANYSPSQIVIIGDTEHDIRCARELDARS 191 (228)
T ss_dssp -------------------------------TCSSGGGHHHHHHHHHHHHHCCCCCGGGEEEEESSHHHHHHHHTTTCEE
T ss_pred -------------------------------ccccccchhHHHHHHhhhhcccCCChhHheeecCChHHHHHHHHcCCEE
Confidence 000000 01111112233322 2367999999999999999999653
Q ss_pred -Ee-cCCc-hHHHhh-hcceecccchhhHHHH
Q 001304 768 -GI-SGRE-GLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 768 -am-~g~~-~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
++ .|.. ..+... .||+++.++..+..++
T Consensus 192 i~v~~g~~~~~~l~~~~ad~vi~~~~el~~~l 223 (228)
T d2hcfa1 192 IAVATGNFTMEELARHKPGTLFKNFAETDEVL 223 (228)
T ss_dssp EEECCSSSCHHHHHTTCCSEEESCSCCHHHHH
T ss_pred EEEcCCCCCHHHHhhCCCCEEECCHHHHHHHH
Confidence 33 1433 333333 6899999988887764
|
| >d1swva_ c.108.1.3 (A:) Phosphonoacetaldehyde hydrolase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Phosphonoacetaldehyde hydrolase species: Bacillus cereus [TaxId: 1396]
Probab=96.97 E-value=0.0011 Score=68.58 Aligned_cols=41 Identities=27% Similarity=0.302 Sum_probs=37.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++.+++.++++.|++.|+++.++||.+...+..+.+..|+.
T Consensus 99 ~~~~g~~~~L~~Lk~~g~~i~i~Tn~~~~~~~~~l~~~~l~ 139 (257)
T d1swva_ 99 SPINGVKEVIASLRERGIKIGSTTGYTREMMDIVAKEAALQ 139 (257)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEBCSSCHHHHHHHHHHHHHT
T ss_pred ccCCcHHHHHHHHHhcccceeecCCCchhhHHHHHHHHhhc
Confidence 57899999999999999999999999999988888888774
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.90 E-value=0.00099 Score=69.77 Aligned_cols=43 Identities=12% Similarity=0.268 Sum_probs=39.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~ 655 (1104)
++|+|+++.++.|++.|+++.++||--...+..++++.|+..+
T Consensus 135 ~Lr~G~~e~~~~l~~~~i~~~IvSgG~~~~ie~vl~~lg~~~~ 177 (291)
T d2bdua1 135 MLKEGYENFFGKLQQHGIPVFIFSAGIGDVLEEVIRQAGVYHS 177 (291)
T ss_dssp CBCBTHHHHHHHHHHHTCCEEEEEEEEHHHHHHHHHHTTCCBT
T ss_pred CcccCHHHHHHHHHHcCCeEEEEcCChHHHHHHHHHHcCCCcc
Confidence 3899999999999999999999999999999999999998544
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.67 E-value=0.0017 Score=64.58 Aligned_cols=116 Identities=17% Similarity=0.137 Sum_probs=79.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.+.++.++..| ++.++|+.....+..+....|+...-.
T Consensus 84 ~~~~~~~~~l~~l~~~~-~~~i~t~~~~~~~~~~l~~~gl~~~fd----------------------------------- 127 (210)
T d2ah5a1 84 QLFPQIIDLLEELSSSY-PLYITTTKDTSTAQDMAKNLEIHHFFD----------------------------------- 127 (210)
T ss_dssp EECTTHHHHHHHHHTTS-CEEEEEEEEHHHHHHHHHHTTCGGGCS-----------------------------------
T ss_pred cchhHHHHHHhhhhccc-chhhcccccchhhhHHHHhhccccccc-----------------------------------
Confidence 57899999999999775 899999999999999999999843211
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHH----hcCCeEEEEcCCccChhhhhhcCc-eE
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLK----SCDYRTLAIGDGGNDVRMIQKADI-GV 767 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk----~~~~~v~~iGDG~ND~~ml~~Adv-GI 767 (1104)
.++.+.-.+..|..+.+... -..+.+++|||+.||+.|-+.|++ .|
T Consensus 128 -----------------------------~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~VGDs~~Di~aa~~aGi~~i 178 (210)
T d2ah5a1 128 -----------------------------GIYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKFDMLGARETGIQKL 178 (210)
T ss_dssp -----------------------------EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEE
T ss_pred -----------------------------ccccccccccccccccchhhhhhhcccccceeecCCHHHHHHHHHcCCeEE
Confidence 11222222333333333322 234679999999999999999998 55
Q ss_pred Eec-CC-chHHHhh-hcceecccchhhHH
Q 001304 768 GIS-GR-EGLQAAR-AADYSIGKFRFLKR 793 (1104)
Q Consensus 768 am~-g~-~~~~a~~-~AD~vl~~f~~l~~ 793 (1104)
++. |. ...+... .+|+++.+...|..
T Consensus 179 ~v~~g~~~~~~l~~~~pd~vi~~l~el~~ 207 (210)
T d2ah5a1 179 AITWGFGEQADLLNYQPDYIAHKPLEVLA 207 (210)
T ss_dssp EESSSSSCHHHHHTTCCSEEESSTTHHHH
T ss_pred EEcCCCCCHHHHHhCCCCEEECCHHHHHH
Confidence 552 32 2333444 48999888666543
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.42 E-value=0.0019 Score=64.03 Aligned_cols=118 Identities=18% Similarity=0.194 Sum_probs=73.5
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|+++++++.|++.|+++.++|+... .+..+.+..|+...-.
T Consensus 82 ~~~pgv~~~L~~L~~~g~~~~v~Sn~~~-~~~~~l~~~gl~~~f~----------------------------------- 125 (204)
T d2go7a1 82 VLMPGAREVLAWADESGIQQFIYTHKGN-NAFTILKDLGVESYFT----------------------------------- 125 (204)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEECSSCT-HHHHHHHHHTCGGGEE-----------------------------------
T ss_pred cccchHHhhhhcccccccchhhhcccch-hhhhhhhhcccccccc-----------------------------------
Confidence 4679999999999999999999998654 5566777888732100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceE-EecC
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGV-GISG 771 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGI-am~g 771 (1104)
.++.. .......=.|+--..+++.+.-....++||||+.+|+.+-+.|++.. ++ .
T Consensus 126 --~i~~s---------------------~~~~~~Kp~~~~~~~~~~~~~~~p~~~l~VgD~~~Di~~A~~~G~~~i~v-~ 181 (204)
T d2go7a1 126 --EILTS---------------------QSGFVRKPSPEAATYLLDKYQLNSDNTYYIGDRTLDVEFAQNSGIQSINF-L 181 (204)
T ss_dssp --EEECG---------------------GGCCCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHHTCEEEES-S
T ss_pred --ccccc---------------------ccccccchhHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHcCCeEEEE-c
Confidence 00000 00001111222223344444434578999999999999999999854 44 2
Q ss_pred CchHHHhhhcceecccchhhHHH
Q 001304 772 REGLQAARAADYSIGKFRFLKRL 794 (1104)
Q Consensus 772 ~~~~~a~~~AD~vl~~f~~l~~l 794 (1104)
... ..+|+.+.+...+..+
T Consensus 182 ~~~----~~~~~~~~~~~dl~~l 200 (204)
T d2go7a1 182 EST----YEGNHRIQALADISRI 200 (204)
T ss_dssp CCS----CTTEEECSSTTHHHHH
T ss_pred CCC----CCcCeecCCHHHHHHH
Confidence 221 2466666665555543
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=96.41 E-value=0.0081 Score=58.21 Aligned_cols=60 Identities=23% Similarity=0.302 Sum_probs=40.9
Q ss_pred HHHHHHhcCCeEEEEcCCccChhhhhhcCce--EEe-cCCchH-HHhhhcceecccchhhHHHH
Q 001304 736 LVELLKSCDYRTLAIGDGGNDVRMIQKADIG--VGI-SGREGL-QAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 736 iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG--Iam-~g~~~~-~a~~~AD~vl~~f~~l~~ll 795 (1104)
+.+.+.-..+.++||||..+|+.|=+.|+++ +.+ +|.... .....||+++.++..+..++
T Consensus 117 ~~~~~~i~~~~s~mVGDs~~Di~aA~~Ag~~~~~lv~~g~~~~~~~~~~ad~v~~~l~dl~~~i 180 (182)
T d2gmwa1 117 ARDYLHIDMAASYMVGDKLEDMQAAVAANVGTKVLVRTGKPITPEAENAADWVLNSLADLPQAI 180 (182)
T ss_dssp HHHHHTBCGGGCEEEESSHHHHHHHHHTTCSEEEEESSSSCCCHHHHHHCSEEESCGGGHHHHH
T ss_pred hhhhcccccccccccCCCHHHHHHHHHhCCCcEEEECCCCCCCcccccCCCEEECCHHHHHHHh
Confidence 3344433456799999999999999999995 333 233222 23346999999987776543
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=96.39 E-value=0.0012 Score=65.71 Aligned_cols=120 Identities=17% Similarity=0.164 Sum_probs=76.1
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.+++.++++.|+ +++++.++|+.....+..+.+..|+...-.
T Consensus 82 ~~~~g~~~~L~~l~-~~~~~~ivT~~~~~~~~~~l~~~~l~~~f~----------------------------------- 125 (207)
T d2hdoa1 82 ELYPGITSLFEQLP-SELRLGIVTSQRRNELESGMRSYPFMMRMA----------------------------------- 125 (207)
T ss_dssp EECTTHHHHHHHSC-TTSEEEEECSSCHHHHHHHHTTSGGGGGEE-----------------------------------
T ss_pred ccccchhhhhhhhc-cccccccccccccccccccccccccccccc-----------------------------------
Confidence 36699999999997 579999999999999999998888732100
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEe--c
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI--S 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam--~ 770 (1104)
.++.+. ..-...=.|+--..+++.++-..+.+++|||+.+|+.+-+.|++.... .
T Consensus 126 --~i~~~~---------------------~~~~~KP~p~~~~~~~~~~~~~~~~~l~VgDs~~Di~~a~~aG~~~i~v~~ 182 (207)
T d2hdoa1 126 --VTISAD---------------------DTPKRKPDPLPLLTALEKVNVAPQNALFIGDSVSDEQTAQAANVDFGLAVW 182 (207)
T ss_dssp --EEECGG---------------------GSSCCTTSSHHHHHHHHHTTCCGGGEEEEESSHHHHHHHHHHTCEEEEEGG
T ss_pred --cccccc---------------------ccccchhhhhhhcccccceeeeccceeEecCCHHHHHHHHHcCCeEEEEec
Confidence 000000 000001112222333444333346799999999999999999998743 2
Q ss_pred CCchHHHhhhcceecccchhh
Q 001304 771 GREGLQAARAADYSIGKFRFL 791 (1104)
Q Consensus 771 g~~~~~a~~~AD~vl~~f~~l 791 (1104)
|.........+|+++.+...|
T Consensus 183 g~~~~~~~~~~~~~i~~l~dl 203 (207)
T d2hdoa1 183 GMDPNADHQKVAHRFQKPLDI 203 (207)
T ss_dssp GCCTTGGGSCCSEEESSGGGG
T ss_pred CCCChhHhhhcCcEeCCHHHH
Confidence 333333345678888765544
|
| >d1x42a1 c.108.1.1 (A:1-230) Hypothetical protein PH0459 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: Hypothetical protein PH0459 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=96.28 E-value=0.0053 Score=61.88 Aligned_cols=124 Identities=11% Similarity=0.074 Sum_probs=77.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
++.|++.++++.|+ +|+++.++|+........+.+.+|+...-.. ++.
T Consensus 100 ~~~p~~~~~L~~l~-~~~~i~i~Sn~~~~~~~~~l~~~gl~~~fd~--i~~----------------------------- 147 (230)
T d1x42a1 100 ELYPEVVEVLKSLK-GKYHVGMITDSDTEYLMAHLDALGIKDLFDS--ITT----------------------------- 147 (230)
T ss_dssp CBCTTHHHHHHHHB-TTBEEEEEESSCHHHHHHHHHHHTCGGGCSE--EEE-----------------------------
T ss_pred cccccHHHHHHHhh-ccCceeeeeccccccchhhhccccccccccc--ccc-----------------------------
Confidence 46799999999996 5899999999988888889999888422110 110
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCC-ccChhhhhhcCceE-Eec
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDG-GNDVRMIQKADIGV-GIS 770 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG-~ND~~ml~~AdvGI-am~ 770 (1104)
.. ..-..+=.|+-=..+++.+.-....+++|||. .+|+.+=+.|++-. .+.
T Consensus 148 ------s~---------------------~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgD~~~~Di~~A~~~G~~~v~v~ 200 (230)
T d1x42a1 148 ------SE---------------------EAGFFKPHPRIFELALKKAGVKGEEAVYVGDNPVKDCGGSKNLGMTSILLD 200 (230)
T ss_dssp ------HH---------------------HHTBCTTSHHHHHHHHHHHTCCGGGEEEEESCTTTTHHHHHTTTCEEEEEC
T ss_pred ------cc---------------------cccccchhhHHHHHHHhhhcccccccceeecCcHhHHHHHHHcCCEEEEEC
Confidence 00 00000001111122333333345679999997 68999999998864 231
Q ss_pred -CCchHHHhhhcceecccchhhHHHH
Q 001304 771 -GREGLQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 771 -g~~~~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+....+....+|+++.+++.|..++
T Consensus 201 ~~~~~~~~~~~~d~~i~~l~el~~~l 226 (230)
T d1x42a1 201 RKGEKREFWDKCDFIVSDLREVIKIV 226 (230)
T ss_dssp TTSCCGGGGGGSSEEESSTTHHHHHH
T ss_pred CCCCCcccccCCCEEECCHHHHHHHH
Confidence 2222234447899999988776654
|
| >d1zs9a1 c.108.1.22 (A:4-256) E-1 enzyme {Human(Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Enolase-phosphatase E1 domain: E-1 enzyme species: Human(Homo sapiens) [TaxId: 9606]
Probab=96.09 E-value=0.0068 Score=61.42 Aligned_cols=122 Identities=14% Similarity=0.141 Sum_probs=78.0
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPK 691 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 691 (1104)
-.+.|++.+++++|+++|+++.++|+............+|+..-.... ....
T Consensus 126 ~~~~pg~~e~l~~L~~~g~~l~i~Tn~~~~~~~~~~~~~~~~~~~~~~-~~~~--------------------------- 177 (253)
T d1zs9a1 126 AEFFADVVPAVRKWREAGMKVYIYSSGSVEAQKLLFGHSTEGDILELV-DGHF--------------------------- 177 (253)
T ss_dssp BCCCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHTBTTBCCGGGC-SEEE---------------------------
T ss_pred cccCCCHHHHHHHHhhccCceeecCCCcHHHHHHHHHHcCcchhhhhc-ceee---------------------------
Confidence 346899999999999999999999999999888888888874321100 0000
Q ss_pred ceEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEEe--
Q 001304 692 DVAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVGI-- 769 (1104)
Q Consensus 692 ~~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIam-- 769 (1104)
......+-.|+-=..+.+.+.-..+.++||||..+|+.+=++|++-...
T Consensus 178 -----------------------------d~~~~~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~dv~aA~~aG~~ti~v~ 228 (253)
T d1zs9a1 178 -----------------------------DTKIGHKVESESYRKIADSIGCSTNNILFLTDVTREASAAEEADVHVAVVV 228 (253)
T ss_dssp -----------------------------CGGGCCTTCHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHTTCEEEEEC
T ss_pred -----------------------------ccccccCCCcHHHHHHHHHhCCCcCcEEEEeCCHHHHHHHHHcCCEEEEEe
Confidence 0000011111111223344443457899999999999999999996543
Q ss_pred -cCCchH-HHhhhcceecccchh
Q 001304 770 -SGREGL-QAARAADYSIGKFRF 790 (1104)
Q Consensus 770 -~g~~~~-~a~~~AD~vl~~f~~ 790 (1104)
.|+... +....++.+|.+++-
T Consensus 229 r~g~~~~~~~~~~~~~~i~sl~E 251 (253)
T d1zs9a1 229 RPGNAGLTDDEKTYYSLITSFSE 251 (253)
T ss_dssp CTTCCCCCHHHHHHSCEESSGGG
T ss_pred CCCCCCCchhhcCCCcEECChHH
Confidence 234332 223466778877653
|
| >d2a29a1 d.220.1.1 (A:316-451) Potassium-transporting ATPase B chain, KdpB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Metal cation-transporting ATPase, ATP-binding domain N superfamily: Metal cation-transporting ATPase, ATP-binding domain N family: Metal cation-transporting ATPase, ATP-binding domain N domain: Potassium-transporting ATPase B chain, KdpB species: Escherichia coli [TaxId: 562]
Probab=95.98 E-value=0.0024 Score=58.85 Aligned_cols=105 Identities=21% Similarity=0.284 Sum_probs=73.7
Q ss_pred cCCccHHHHHHHHHhcCcEEEeecCcEEEEEeCCeeEEEEEEEEeccCCCCeeEEEEEEeCCCCcEEEEecChHHhhhhh
Q 001304 454 AQSQDEEALVHAAAQLHMVLVNKNASILEIKFNGSVLQYEILETLEFTSDRKRMSVVVKDCHSGNISLLSKGADEAILPY 533 (1104)
Q Consensus 454 ~~~p~e~Al~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~il~~~~F~s~rkrmsviv~~~~~~~~~l~~KGa~e~i~~~ 533 (1104)
++||..+|++++|++.+....... .+.-....||+...+...+.+ +|+ .+..|++..+...
T Consensus 29 SeHPlakAIv~~Ak~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~g~~~----~g~--~v~~G~~~~~~~~ 89 (136)
T d2a29a1 29 DETPEGRSIVILAKQRFNLRERDV-------------QSLHATFVPFTAQSRMSGINI----DNR--MIRKGSVDAIRRH 89 (136)
T ss_dssp CCSHHHHHHHHHHHHHHCCCCCCT-------------TTTTCEEEEEETTTTEEEEEE----TTE--EEEEECHHHHHHH
T ss_pred CCchHHHHHHHHHHHhcCCCcccc-------------ccccccccccccccceEEEEE----CCE--EEEecHHHHHHHH
Confidence 679999999999987653321110 011112356666665444433 232 5677999887766
Q ss_pred hcc--CCchhHHHHHHHHHHhccceEEEEEEEecCHHHHHHHHHHHHHHhhhhchHHHHHHHHHHHhccCcEEEEEEeec
Q 001304 534 AHA--GQQTRTFVEAVEQYSQLGLRTLCLAWREVEEDEYQEWSLMFKEASSTLIDREWRIAEVCQRLEHDLKVLGVTAIE 611 (1104)
Q Consensus 534 ~~~--~~~~~~~~~~~~~~a~~GlR~l~~A~k~l~~~e~~~~~~~~~~~~~~~~~r~~~~~~~~~~ie~~l~llG~i~i~ 611 (1104)
+.. ...+.++.+.+++++.+|.+++.+| .|-.++|++++.
T Consensus 90 ~~~~g~~~~~~~~~~~~~~~~~G~Tvv~Va--------------------------------------~d~~~~G~i~l~ 131 (136)
T d2a29a1 90 VEANGGHFPTDVDQKVDQVARQGATPLVVV--------------------------------------EGSRVLGVIALK 131 (136)
T ss_dssp HHHHTCCCCHHHHHHHHHHHHTTSEEEEEE--------------------------------------ETTEEEEEEEEE
T ss_pred HHHcCCCCcHHHHHHHHHHHHCCCeEEEEE--------------------------------------ECCEEEEEEEEE
Confidence 542 3345788899999999999999999 578999999999
Q ss_pred ccCC
Q 001304 612 DRLQ 615 (1104)
Q Consensus 612 D~lr 615 (1104)
|++|
T Consensus 132 D~iK 135 (136)
T d2a29a1 132 DIVK 135 (136)
T ss_dssp ESSC
T ss_pred eecC
Confidence 9986
|
| >d2gfha1 c.108.1.6 (A:1-247) N-acylneuraminate-9-phosphatase NANP {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: N-acylneuraminate-9-phosphatase NANP species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.65 E-value=0.01 Score=60.25 Aligned_cols=117 Identities=19% Similarity=0.212 Sum_probs=77.3
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCce
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKDV 693 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 693 (1104)
+.+++.++++.|+ .|++++++|+..........+.+|+...-..
T Consensus 110 ~~~~~~~~L~~L~-~~~~l~i~Tn~~~~~~~~~l~~~gl~~~fd~----------------------------------- 153 (247)
T d2gfha1 110 LADDVKAMLTELR-KEVRLLLLTNGDRQTQREKIEACACQSYFDA----------------------------------- 153 (247)
T ss_dssp CCHHHHHHHHHHH-TTSEEEEEECSCHHHHHHHHHHHTCGGGCSE-----------------------------------
T ss_pred cCccHHHHHHHhh-cccceEEeecccchhhhhhhhhccccccccc-----------------------------------
Confidence 5789999999998 4899999999999888888899997432111
Q ss_pred EEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH------HHHHHHHHhcCCeEEEEcCCc-cChhhhhhcCce
Q 001304 694 AFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK------AQLVELLKSCDYRTLAIGDGG-NDVRMIQKADIG 766 (1104)
Q Consensus 694 ~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK------~~iV~~lk~~~~~v~~iGDG~-ND~~ml~~AdvG 766 (1104)
.+.+.-.+..| ..+++.+.-..+.+++|||.. +|+.+=+.|++.
T Consensus 154 -----------------------------i~~s~~~~~~KP~p~~~~~~~~~~~~~~~~~l~iGD~~~~Di~~A~~~G~~ 204 (247)
T d2gfha1 154 -----------------------------IVIGGEQKEEKPAPSIFYHCCDLLGVQPGDCVMVGDTLETDIQGGLNAGLK 204 (247)
T ss_dssp -----------------------------EEEGGGSSSCTTCHHHHHHHHHHHTCCGGGEEEEESCTTTHHHHHHHTTCS
T ss_pred -----------------------------cccccccccchhhhhhHHHHHHHhhcCHHhcceeccChHhHHHHHHHcCCe
Confidence 11111111112 223333333346799999996 899999999996
Q ss_pred -EEecCCch---HHHhhhcceecccchhhHHHH
Q 001304 767 -VGISGREG---LQAARAADYSIGKFRFLKRLI 795 (1104)
Q Consensus 767 -Iam~g~~~---~~a~~~AD~vl~~f~~l~~ll 795 (1104)
+......+ ......+|+++.+...|..++
T Consensus 205 ~~~~~~~~~~~~~~~~~~p~~~i~~l~eL~~ll 237 (247)
T d2gfha1 205 ATVWINKSGRVPLTSSPMPHYMVSSVLELPALL 237 (247)
T ss_dssp EEEEECTTCCCCSSCCCCCSEEESSGGGHHHHH
T ss_pred EEEEECCCCCCcccccCCCCEEECCHHHHHHHH
Confidence 54322111 111225799999877777664
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=95.62 E-value=0.046 Score=55.83 Aligned_cols=60 Identities=20% Similarity=0.269 Sum_probs=39.8
Q ss_pred HHHHHHHhcCCeEEEEcCCc-cChhhhhhcCc-eEEe-cCCc-hHHHhh---hcceecccchhhHHH
Q 001304 735 QLVELLKSCDYRTLAIGDGG-NDVRMIQKADI-GVGI-SGRE-GLQAAR---AADYSIGKFRFLKRL 794 (1104)
Q Consensus 735 ~iV~~lk~~~~~v~~iGDG~-ND~~ml~~Adv-GIam-~g~~-~~~a~~---~AD~vl~~f~~l~~l 794 (1104)
.+.+.+.-..+.++||||.. +|+.+-+.|++ +|.+ +|.. ..+... .+|+++.+...|..+
T Consensus 193 ~a~~~l~~~~~~~lmVGD~~~~DI~ga~~aG~~si~V~~G~~~~~~~~~~~~~PD~ii~~l~eL~~~ 259 (261)
T d1vjra_ 193 VISEKFGVPKERMAMVGDRLYTDVKLGKNAGIVSILVLTGETTPEDLERAETKPDFVFKNLGELAKA 259 (261)
T ss_dssp HHHHHHTCCGGGEEEEESCHHHHHHHHHHHTCEEEEESSSSCCHHHHHHCSSCCSEEESSHHHHHHH
T ss_pred HHHhhhccCchhcceecCChhHHHHHHHHCCCcEEEECCCCCCHHHHhhcCCCCCEEECCHHHHHHH
Confidence 34444443567899999996 69999999997 5554 2322 222222 359999987776654
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=95.60 E-value=0.021 Score=55.18 Aligned_cols=40 Identities=15% Similarity=0.344 Sum_probs=33.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFI 653 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~ 653 (1104)
++.+|+++.++.|++.|+++.++|+.+.. +..+.+..++.
T Consensus 79 ~~~~gv~~~l~~l~~~g~~~~i~Sn~~~~-~~~~l~~~~l~ 118 (187)
T d2fi1a1 79 ILFEGVSDLLEDISNQGGRHFLVSHRNDQ-VLEILEKTSIA 118 (187)
T ss_dssp CBCTTHHHHHHHHHHTTCEEEEECSSCTH-HHHHHHHTTCG
T ss_pred cccchhHHHHHHHHhhhccccccccCccc-hhhhhhhhccc
Confidence 56799999999999999999999997654 44567777763
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=95.59 E-value=0.011 Score=60.44 Aligned_cols=35 Identities=14% Similarity=0.248 Sum_probs=29.3
Q ss_pred CChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHc
Q 001304 616 DGVPETIETLRKAGINFWMLTGDKQNTAIQIALSC 650 (1104)
Q Consensus 616 ~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~ 650 (1104)
+++.++|+.|+++|++++++|+....+...++.++
T Consensus 21 ~~a~~~i~~l~~~g~~~~~~Tn~s~~~~~~~~~~L 55 (253)
T d1yv9a1 21 PAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRL 55 (253)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHH
T ss_pred ccHHHHHHHHHHCCCCEEEEeCCCCCCHHHHHHHH
Confidence 67899999999999999999988777666666543
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.57 E-value=0.0088 Score=56.85 Aligned_cols=40 Identities=20% Similarity=0.258 Sum_probs=31.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCH-hHHHHHHHHcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQ-NTAIQIALSCNF 652 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~-~ta~~ia~~~gi 652 (1104)
++.|++.++++.|+++|+++.++|+-+. ..+....+..++
T Consensus 46 ~l~pgv~e~L~~L~~~G~~~~v~S~~~~~~~~~~~l~~~~~ 86 (164)
T d1u7pa_ 46 QLYPEVPEVLGRLQSLGVPVAAASRTSEIQGANQLLELFDL 86 (164)
T ss_dssp CCCTTHHHHHHHHHHTTCCEEEEECCSCHHHHHHHHHHTTC
T ss_pred ccchHHHHHHHHHHHCCCcEEEEeccccchhhccchhcccc
Confidence 5789999999999999999999997554 444444455444
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=95.21 E-value=0.027 Score=57.31 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=32.9
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcC---CCHhHHHHHHHHcCCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTG---DKQNTAIQIALSCNFISP 655 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTG---D~~~ta~~ia~~~gi~~~ 655 (1104)
+.+=+++.++|+.|+++|++++++|+ +........-.++|+..+
T Consensus 18 ~~~i~~a~e~i~~l~~~g~~~~~~TN~~~~~~~~~~~~l~~~G~~~~ 64 (250)
T d2c4na1 18 NVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDVP 64 (250)
T ss_dssp TEECTTHHHHHHHHHHTTCCEEEEESCCSCCHHHHHHHHHHTTCCCC
T ss_pred CCcCccHHHHHHHHHHCCCcEEEEeCCCCCCHHHHHHHHhhcccccc
Confidence 44447899999999999999999984 445555555567787433
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=94.61 E-value=0.0063 Score=56.69 Aligned_cols=30 Identities=17% Similarity=0.211 Sum_probs=27.8
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCH
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQ 640 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~ 640 (1104)
+|++.+++.+.++.|+++|+++.++||++.
T Consensus 34 ~~~~~p~v~~~l~~l~~~G~~Iii~T~R~~ 63 (149)
T d1ltqa1 34 TDVINPMVVELSKMYALMGYQIVVVSGRES 63 (149)
T ss_dssp GCCBCHHHHHHHHHHHHTTCEEEEEECSCC
T ss_pred cCccCHHHHHHHHHHHhccCeEEEEecCcH
Confidence 578899999999999999999999999964
|
| >d1o08a_ c.108.1.6 (A:) beta-Phosphoglucomutase {Lactococcus lactis [TaxId: 1358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: beta-Phosphoglucomutase species: Lactococcus lactis [TaxId: 1358]
Probab=94.10 E-value=0.041 Score=54.45 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=34.5
Q ss_pred cccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 611 EDRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 611 ~D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
..++-+++.+.++.|++.|+++.++|+... +.......|+..
T Consensus 89 ~~~~~~g~~~~l~~l~~~~~~i~i~s~~~~--~~~~l~~~~l~~ 130 (221)
T d1o08a_ 89 PADVYPGILQLLKDLRSNKIKIALASASKN--GPFLLERMNLTG 130 (221)
T ss_dssp GGGBCTTHHHHHHHHHHTTCEEEECCSCTT--HHHHHHHTTCGG
T ss_pred cccccCCceeccccccccccceEEEeecch--hhHHHHhhcccc
Confidence 456789999999999999999999999754 466677777743
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=93.99 E-value=0.047 Score=53.80 Aligned_cols=26 Identities=27% Similarity=0.339 Sum_probs=23.6
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
++-|++.++|+.|+++|+++.++|..
T Consensus 48 ~l~pgv~e~L~~L~~~G~~l~IvTNQ 73 (209)
T d2o2xa1 48 VLRPQMLPAIATANRAGIPVVVVTNQ 73 (209)
T ss_dssp CBCGGGHHHHHHHHHHTCCEEEEEEC
T ss_pred EecccHHHHHHHHHhhCCeEEEeccc
Confidence 36799999999999999999999964
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=93.88 E-value=0.11 Score=52.60 Aligned_cols=61 Identities=15% Similarity=0.181 Sum_probs=39.9
Q ss_pred ChhhHHHHHHHHHhcCCeEEEEcCCcc-ChhhhhhcCc-eEEe-cCCc-hHHHhh---hcceecccch
Q 001304 729 TPSQKAQLVELLKSCDYRTLAIGDGGN-DVRMIQKADI-GVGI-SGRE-GLQAAR---AADYSIGKFR 789 (1104)
Q Consensus 729 sP~qK~~iV~~lk~~~~~v~~iGDG~N-D~~ml~~Adv-GIam-~g~~-~~~a~~---~AD~vl~~f~ 789 (1104)
+|.--..+.+.++-..+.++||||..+ |+.+-++|++ +|.+ +|.. ..+... ..|+++.++.
T Consensus 182 ~p~~~~~al~~l~i~~~~~~mIGDs~~~DI~gA~~aG~~si~V~~G~~~~~~~~~~~~~PD~vi~sl~ 249 (253)
T d1wvia_ 182 EAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGIKNDIATLLVTTGFTKPEEVPALPIQPDFVLSSLA 249 (253)
T ss_dssp SHHHHHHHHHHHTSCGGGEEEEESCTTTTHHHHHHTTCEEEEESSSSSCTTTGGGCSSCCSEEESCGG
T ss_pred CcccceehhhhccccccceEEEcCChHHHHHHHHHCCCCEEEECCCCCCHHHHhhcCCCCCEEECCHH
Confidence 344444555555545578999999976 9999999999 7766 2322 222333 2499987654
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=93.60 E-value=0.032 Score=55.17 Aligned_cols=122 Identities=13% Similarity=0.150 Sum_probs=77.9
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.++++.+++.|+++.++|+-....+.......++...-.. ++...
T Consensus 93 ~~~~~~~~~l~~l~~~~~~~~i~tn~~~~~~~~~~~~~~~~~~fd~--~~~s~--------------------------- 143 (220)
T d1zrna_ 93 APFSEVPDSLRELKRRGLKLAILSNGSPQSIDAVVSHAGLRDGFDH--LLSVD--------------------------- 143 (220)
T ss_dssp EECTTHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTTCGGGCSE--EEESG---------------------------
T ss_pred cccchhHHHHHHHHhcCCeEEeecchHHHHHHHHHhhccccccccc--eeeee---------------------------
Confidence 4578999999999999999999999999888888887777433211 11000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCceEE-e--
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADIGVG-I-- 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvGIa-m-- 769 (1104)
..-..+-.|+-=..+++.+.-..+.+++|||..+|+.+=+.||+-.. +
T Consensus 144 -----------------------------~~~~~KP~p~~~~~~~~~~g~~p~e~l~VgD~~~Di~~A~~aG~~~v~v~r 194 (220)
T d1zrna_ 144 -----------------------------PVQVYKPDNRVYELAEQALGLDRSAILFVASNAWDATGARYFGFPTCWINR 194 (220)
T ss_dssp -----------------------------GGTCCTTSHHHHHHHHHHHTSCGGGEEEEESCHHHHHHHHHHTCCEEEECT
T ss_pred -----------------------------eeeccccHHHHHHHHHHHhCCCCceEEEEecChHhHHHHHHcCCEEEEEcC
Confidence 00001111221122334443345789999999999999999997753 3
Q ss_pred cCCchHHHhhhcceecccchhhH
Q 001304 770 SGREGLQAARAADYSIGKFRFLK 792 (1104)
Q Consensus 770 ~g~~~~~a~~~AD~vl~~f~~l~ 792 (1104)
.+....+....+|+++.+++.|.
T Consensus 195 ~~~~~~~~~~~~d~~i~~l~el~ 217 (220)
T d1zrna_ 195 TGNVFEEMGQTPDWEVTSLRAVV 217 (220)
T ss_dssp TCCCCCSSSCCCSEEESSHHHHH
T ss_pred CCCCcccccCCCCEEECCHHHHH
Confidence 12222233346899988765543
|
| >d2b82a1 c.108.1.12 (A:4-212) Class B acid phosphatase, AphA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Class B acid phosphatase, AphA domain: Class B acid phosphatase, AphA species: Escherichia coli [TaxId: 562]
Probab=93.52 E-value=0.042 Score=53.43 Aligned_cols=41 Identities=12% Similarity=0.191 Sum_probs=32.8
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCH----hHHHHHHHHcCCCC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQ----NTAIQIALSCNFIS 654 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~----~ta~~ia~~~gi~~ 654 (1104)
+.+++.+.++.+++.|++|+.+|||.. .|+.+..+.+|+-.
T Consensus 87 p~pga~~fl~~~~~~Gv~IfyVTnR~~~~~e~T~~nL~K~lG~p~ 131 (209)
T d2b82a1 87 PKEVARQLIDMHVRRGDAIFFVTGRSPTKTETVSKTLADNFHIPA 131 (209)
T ss_dssp ECHHHHHHHHHHHHHTCEEEEEECSCCCSSCCHHHHHHHHTTCCT
T ss_pred cchhHHHHHHHHHHcCCeEEEEeCCchhhHHHHHHHHHHHcCCCc
Confidence 457899999999999999999999863 35566666677743
|
| >d1y8aa1 c.108.1.24 (A:1-308) Hypothetical protein AF1437 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: AF1437-like domain: Hypothetical protein AF1437 species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.60 E-value=0.54 Score=45.56 Aligned_cols=153 Identities=14% Similarity=0.118 Sum_probs=81.6
Q ss_pred CCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcH------HHHHHHHHHHHHHccccC
Q 001304 614 LQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTE------DEVCRSLERVLLTMRITT 687 (1104)
Q Consensus 614 lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~ 687 (1104)
+-||+.++++.+++. ....++|---..-+.++|...|+- . . ++....+. .+..+.+-+..+..
T Consensus 82 lvpgA~~~lk~l~~~-m~~yIvSTSY~qyi~al~~~~gfp--~---e-~~~T~~~lD~~~~p~ee~e~ll~i~~~~---- 150 (308)
T d1y8aa1 82 FVPDAEKAMATLQER-WTPVVISTSYTQYLRRTASMIGVR--G---E-LHGTEVDFDSIAVPEGLREELLSIIDVI---- 150 (308)
T ss_dssp BCTTHHHHHHHHHTT-CEEEEEEEEEHHHHHHHHHHTTCC--S---E-EEEEBCCGGGCCCCHHHHHHHHHHHHHH----
T ss_pred ecCCHHHHHHHHHhh-CCcEEEeccHHHHHHHHHhhcCCC--c---e-eecccccccccCCChHHHHHHHHHhhhc----
Confidence 569999999999976 555666655566788999999982 1 1 22221111 11111111111110
Q ss_pred CCCCceEEEEcchhHHHHHHHHHHHHHhH--hhhccceeeeccChhhHHHHHHHHHh-cC-CeEEEEcCCccChhhhhhc
Q 001304 688 SEPKDVAFVVDGWALEIALKHYRKAFTEL--AILSRTAICCRVTPSQKAQLVELLKS-CD-YRTLAIGDGGNDVRMIQKA 763 (1104)
Q Consensus 688 ~~~~~~~lvi~g~~l~~~~~~~~~~f~~l--~~~~~~~i~~r~sP~qK~~iV~~lk~-~~-~~v~~iGDG~ND~~ml~~A 763 (1104)
.++ +.+.+.+.+.+.|..+ ..++..+- -+--..|+.+++..-. .+ ...+.+||+..|+.||+.|
T Consensus 151 ---------~d~-~~eel~e~~d~~f~~~e~~~i~e~Vk--~VGgg~k~~i~~~~~~~~~~~~~~~VGDSITDve~Lr~~ 218 (308)
T d1y8aa1 151 ---------ASL-SGEELFRKLDELFSRSEVRKIVESVK--AVGAGEKAKIMRGYCESKGIDFPVVVGDSISDYKMFEAA 218 (308)
T ss_dssp ---------HHC-CHHHHHHHHHHHHHSHHHHHHHHTCB--CCCHHHHHHHHHHHHHHHTCSSCEEEECSGGGHHHHHHH
T ss_pred ---------cCc-cHHHHHHHHHHHhccchHhhHHhhhc--ccCCchhHHHHHhhcccccCCcceeccCccccHHHHHHH
Confidence 011 1111222122222211 11111100 0122456766665443 12 3358999999999999987
Q ss_pred ----CceEEecCCchHHHhhhcceecccchhh
Q 001304 764 ----DIGVGISGREGLQAARAADYSIGKFRFL 791 (1104)
Q Consensus 764 ----dvGIam~g~~~~~a~~~AD~vl~~f~~l 791 (1104)
++.|+..||+. +.+.||+++..-+..
T Consensus 219 r~~gGlaIsFNGN~Y--al~eA~VaiiS~~~~ 248 (308)
T d1y8aa1 219 RGLGGVAIAFNGNEY--ALKHADVVIISPTAM 248 (308)
T ss_dssp HHTTCEEEEESCCHH--HHTTCSEEEECSSTH
T ss_pred hcCCCeeEEecCccc--cccccceEEeccchh
Confidence 45556666665 888999998764443
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=90.48 E-value=0.13 Score=48.13 Aligned_cols=26 Identities=31% Similarity=0.482 Sum_probs=23.7
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCC
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGD 638 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD 638 (1104)
.+-|++.++++.|+++|+++.++|..
T Consensus 30 ~~~pgv~e~L~~L~~~g~~l~i~TNq 55 (161)
T d2fpwa1 30 AFEPGVIPQLLKLQKAGYKLVMITNQ 55 (161)
T ss_dssp CBCTTHHHHHHHHHHTTEEEEEEEEC
T ss_pred eECccHHHHHHHHHHcCCceeeeccc
Confidence 45799999999999999999999975
|
| >d2fdra1 c.108.1.6 (A:3-224) Hypothetical protein Atu0790 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein Atu0790 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=90.47 E-value=0.15 Score=50.18 Aligned_cols=123 Identities=14% Similarity=0.160 Sum_probs=76.0
Q ss_pred cCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCCCCCCCeEEEecCCcHHHHHHHHHHHHHHccccCCCCCc
Q 001304 613 RLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFISPEPKGQLLSIDGKTEDEVCRSLERVLLTMRITTSEPKD 692 (1104)
Q Consensus 613 ~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 692 (1104)
.+.+++.+.++.|+ .+..++|+-....+..+...+|+...-... +...+
T Consensus 85 ~~~~g~~~~L~~l~---~~~~i~t~~~~~~~~~~l~~~~l~~~f~~~-~~~~~--------------------------- 133 (222)
T d2fdra1 85 KIIDGVKFALSRLT---TPRCICSNSSSHRLDMMLTKVGLKPYFAPH-IYSAK--------------------------- 133 (222)
T ss_dssp CBCTTHHHHHHHCC---SCEEEEESSCHHHHHHHHHHTTCGGGTTTC-EEEHH---------------------------
T ss_pred chhhhHHHHhhhcc---ccceeeeecchhhhhhhhccccccccccee-ecccc---------------------------
Confidence 46788888877665 456789999999999999999985432110 00000
Q ss_pred eEEEEcchhHHHHHHHHHHHHHhHhhhccceeeeccChhhH--HHHHHHHHhcCCeEEEEcCCccChhhhhhcCce-EEe
Q 001304 693 VAFVVDGWALEIALKHYRKAFTELAILSRTAICCRVTPSQK--AQLVELLKSCDYRTLAIGDGGNDVRMIQKADIG-VGI 769 (1104)
Q Consensus 693 ~~lvi~g~~l~~~~~~~~~~f~~l~~~~~~~i~~r~sP~qK--~~iV~~lk~~~~~v~~iGDG~ND~~ml~~AdvG-Iam 769 (1104)
..-..+..|... ..+.+.+.-..+.+++|||+.+|+.+=+.|++- |++
T Consensus 134 -----------------------------~~~~~~~KP~~~~~~~~~~~l~~~p~~~l~vgDs~~dv~aA~~aG~~~i~v 184 (222)
T d2fdra1 134 -----------------------------DLGADRVKPKPDIFLHGAAQFGVSPDRVVVVEDSVHGIHGARAAGMRVIGF 184 (222)
T ss_dssp -----------------------------HHCTTCCTTSSHHHHHHHHHHTCCGGGEEEEESSHHHHHHHHHTTCEEEEE
T ss_pred -----------------------------cccccccccCHHHHHHHHHhhCCCCceEEEEcCCHHHHHHHHHcCCEEEEE
Confidence 000001222221 223333433457899999999999999999974 455
Q ss_pred cCCc------hHHHhh-hcceecccchhhHHHH
Q 001304 770 SGRE------GLQAAR-AADYSIGKFRFLKRLI 795 (1104)
Q Consensus 770 ~g~~------~~~a~~-~AD~vl~~f~~l~~ll 795 (1104)
.+.. ..+... .||+++.+++.|..++
T Consensus 185 ~~~~~~~~~~~~~l~~~~ad~vi~~l~eL~~ll 217 (222)
T d2fdra1 185 TGASHTYPSHADRLTDAGAETVISRMQDLPAVI 217 (222)
T ss_dssp CCSTTCCTTHHHHHHHHTCSEEESCGGGHHHHH
T ss_pred ccCCCCCcchHHHHHhCCCCEEECCHHHHHHHH
Confidence 3221 112233 4899999988886654
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=87.54 E-value=0.11 Score=50.91 Aligned_cols=40 Identities=15% Similarity=0.247 Sum_probs=29.5
Q ss_pred hhhHHHHHHHHHhcCCeEEEEcCCccChhhhhhcCc-eEEe
Q 001304 730 PSQKAQLVELLKSCDYRTLAIGDGGNDVRMIQKADI-GVGI 769 (1104)
Q Consensus 730 P~qK~~iV~~lk~~~~~v~~iGDG~ND~~ml~~Adv-GIam 769 (1104)
|+--..+++.++-..+.++||||..+|+.+-+.|++ +|.+
T Consensus 160 p~~~~~~~~~~~v~p~~~l~IgD~~~Di~~A~~aG~~ti~V 200 (222)
T d1cr6a1 160 PQIYNFLLDTLKAKPNEVVFLDDFGSNLKPARDMGMVTILV 200 (222)
T ss_dssp HHHHHHHHHHHTSCTTSEEEEESSSTTTHHHHHHTCEEEEC
T ss_pred hHHHHHHHHHhCCCcceEEEEECCHHHHHHHHHcCCEEEEE
Confidence 333344555555556789999999999999999997 5555
|
| >d1qq5a_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Xanthobacter autotrophicus [TaxId: 280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Xanthobacter autotrophicus [TaxId: 280]
Probab=87.22 E-value=0.99 Score=44.37 Aligned_cols=41 Identities=5% Similarity=0.049 Sum_probs=33.4
Q ss_pred ccCCCChHHHHHHHHHcCCeEEEEcCCCHhHHHHHHHHcCCCC
Q 001304 612 DRLQDGVPETIETLRKAGINFWMLTGDKQNTAIQIALSCNFIS 654 (1104)
Q Consensus 612 D~lr~~~~~~I~~l~~aGI~v~mlTGD~~~ta~~ia~~~gi~~ 654 (1104)
.++-+++.+++++|+ |+++.++|+.+...+.......|+..
T Consensus 92 ~~~~~~~~~~L~~l~--~~~~~v~s~~~~~~~~~~~~~~~~~~ 132 (245)
T d1qq5a_ 92 LTPYPDAAQCLAELA--PLKRAILSNGAPDMLQALVANAGLTD 132 (245)
T ss_dssp CCBCTTHHHHHHHHT--TSEEEEEESSCHHHHHHHHHHTTCGG
T ss_pred cccchhhhHHHHHHh--hhceeEEeccchHHHHHHHhhccccc
Confidence 356789999999885 78899999999888888888877743
|