Citrus Sinensis ID: 001402

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080----
MDPRRVGKFSRTKHKRAKADLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKLCLDIGPEAIANGGNSGSFMKNEESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYELLFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVDLLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDHPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNIYLES
cccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEcccHHHHHHHHHHHHHHHHccccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHccccEEEEEccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEcccEEEEccccccccccccEEEEEEccccccccccEEEEEcccccccccccccccccccccccHHHHHHcccccccccccEEEcEEEEcHHHHHHHHHHHcccccHHHHHcccccEEEEHHHHHHHccccccccccccccHHHHHHHHccccEEEEEEccccccccccHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEcccEEcccEEEEEccccccEEEccccEEEcccccccccccccccccccccccEEEEEEEEccccEEEEEEEcccccccccccccccEEcccHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccHHHHHccccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccccHHHccccccccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccEEEEEccEEEEEccccccccccccccccEEEEEEcccccEEEEEcccccccccEEEEEcccccEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccccccccccEEEEEcccccEEEEEEEEcccHHHHHHHccEEEEEEccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccEEEEEccccccEEEEEEccHHHHHHHHHHHHHcccccEEEEEEEEEEcc
ccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEcccHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccHccccccccccccccccHHHHHHHHHcccEEEEEccccccccccccccccEEEccccccccccccHHHHHHHHHHHcHcHccccccccccEEEEcccEEEEccccccccccccEEEEEEcccHHHHcccEEEEEcccccccccccHHHHHHHHccccHHHHHHcccccccccEEEccEEEEEcHHHHHHHHHHHcccccccHccccccHHHHHHHHHHHHccccHHHHHccccccccHHHHHcccccEEEEEccccEEccccHHHHHHHHHHcHHHcccHHHHccccccccccccccEEEEEEEEccccEEcccEEEEEEEccccEEEcccEEEEEEEcccccccccccccEEEccccEEEEEEEccccccEEEEEEccccccccccccccccccccHHHHHHHccccHHHHcccccccHccHHHccccccccHHHHHHHHHHHHccccccccHHHHHHHHHccccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHcccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEccEEEEccccccccccccHHcccEEEEEEEEEcccccEEEEEEcccccEEEEEcccccEEEEccHHHHHcccccccccHHHHHHHHHHccccccccccccEEEEEEccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccccccccHEEEccccEEEEcccccccEEEEEEccccHHHHHHHHHcEEEEEccHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccccccHEEEEEccHHHHHHHHHHHHHHcccccEEEEEEEEEcc
mdprrvgkfsrtKHKRAKADLAAILRKSWYHLRlsvrhpsrvptwDAIVLTAASPEQAELYEWQLRRAKRMgriasstvtlavpdpdgqrigsgaATLNAIFSLAMHYQKLCLdigpeaianggnsgsfmkNEESLSAMVKFMAKKHILLVHaggdskrvpwanpmgkvflplpylaaddpdgpvpllFDHILAISSCARQALKneggiftmtgdvlpcfdastmilpedasciitvpitldiasnHGVIVAAKDGILNENYALSLVDdllqkpnvdelaknhailDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWvpakhdwlmLRPLGKELVSKLGKQRMFSYCAYELLFLhfgtssevldhlsgdvsglvgrrhlcsipattvSDIAASAVVLSSKIahgvsigedsliydsnissgiqigSLSIvvgtnfpeeagstaedsfrfmlpdrhclwevplvgctERVLVYCglhdnpknsltkdgtfcgkpwqkvwhdlgiqesdlwsstgsqekclwnakifpilSYSEMLTLATWLMglsdhktgfllplwknsrRVSLEELHRsidfsemctgssnhQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLcprlqdqnskilpksrAYQAQVDLLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLeplsrgssayqnknddgfvdhpfqprtvkvelpvridfaggwsdtppwsleraGCVLNVAISLesslpigtiiettkmsgvlisddagnqlhiedltpiatpfdhndpfrLVKSALLVTGVIHEKLIESMGLQIrtwanvprgsglgtSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMgtgggwqdqigglypgikftssfpgiplrlqvipllaspQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGrdalmncdvdELGKIMLEAWRLHqeldphcsnefVDRLfafadpyccgyklvgaggGGFALLLAKDAESATELRRMLEKdsnfnsevynwniyles
mdprrvgkfsrtkhkrakaDLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIAsstvtlavpdpdgqRIGSGAATLNAIFSLAMHYQKLCLDIGPEAIANGGNSGSFMKNEESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYELLFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQdqnskilpksrAYQAQVDLLRACKEETtaselehkvWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDHPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQitdgdqsnENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDAESATELRRMlekdsnfnsevynwniyles
MDPRRVGKFSRTKHKRAKADLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKLCLDIGPEAIANGGNSGSFMKNEESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYELLFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDSLIYDSNissgiqigslsivvgTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVDLLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDHPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMgtgggwqdqiggLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVgaggggfalllaKDAESATELRRMLEKDSNFNSEVYNWNIYLES
******************ADLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIASSTVTLAVPD**GQRIGSGAATLNAIFSLAMHYQKLCLDIGPEAIAN*************LSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYELLFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIG******************LSIVVGTNF*********DSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVDLLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLS************GFVDHPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTW*************ILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDA**************NFNSEVYNWNIYL**
***********************ILR*SWYH*R*****PSRVPTWDAIVLTAASPEQAELYEW**RR*****RIASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKLCLDIGPEAIANGGNSGSFMKNEESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDW*****L*KELVSKLGKQRMFSYCAYELLFLHFGTSSEVLDHLSGDVSGLVG*******************VVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLS**********WKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILD*****************AYQAQVDL***********EL**KVWAA***************YLLEPLS******************FQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNIYL**
*****************KADLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKLCLDIGPEAIANGGNSGSFMKNEESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYELLFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVDLLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDHPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNIYLES
***************R*KADLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKLCLDIGPEAIA*******FMKNEESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYELLFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVDLLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDHPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNIYLES
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MDPRRVGKFSRTKHKRAKADLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKLCLDIGPEAIANGGNSGSFMKNEESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYELLFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDSLIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVDLLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDHPFQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNIYLES
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1084 2.2.26 [Sep-21-2011]
Q9LNJ91055 Bifunctional fucokinase/f yes no 0.964 0.991 0.749 0.0
Q8N0W31084 L-fucose kinase OS=Homo s yes no 0.321 0.321 0.316 2e-40
O14772594 Fucose-1-phosphate guanyl no no 0.450 0.821 0.221 5e-11
Q9LY82366 Probable glucuronokinase no no 0.178 0.527 0.247 8e-06
Q8U0F3334 Mevalonate kinase OS=Pyro yes no 0.197 0.640 0.231 2e-05
Q5JJC6337 Mevalonate kinase OS=Pyro yes no 0.192 0.620 0.240 7e-05
Q93ZC9362 Glucuronokinase 1 OS=Arab no no 0.167 0.502 0.245 0.0002
Q9V187335 Mevalonate kinase OS=Pyro yes no 0.196 0.635 0.225 0.0002
C6A3T5333 Mevalonate kinase OS=Ther yes no 0.198 0.645 0.240 0.0004
O59291335 Mevalonate kinase OS=Pyro yes no 0.193 0.626 0.224 0.0007
>sp|Q9LNJ9|FKGP_ARATH Bifunctional fucokinase/fucose pyrophosphorylase OS=Arabidopsis thaliana GN=FKGP PE=1 SV=2 Back     alignment and function desciption
 Score = 1659 bits (4296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 802/1070 (74%), Positives = 916/1070 (85%), Gaps = 24/1070 (2%)

Query: 15   KRAKADLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRI 74
            +R KADLA +LRKSWYHLRLSVRHP+RVPTWDAIVLTAASPEQAELY+WQLRRAKRMGRI
Sbjct: 4    QRKKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYDWQLRRAKRMGRI 63

Query: 75   ASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKLCLDIGPE-AIANGGNSGSFMKNE 133
            ASSTVTLAVPDPDG+RIGSGAATLNAI++LA HY+KL  D+GPE  +ANG          
Sbjct: 64   ASSTVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFDLGPEMEVANGA--------- 114

Query: 134  ESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHIL 193
                  V+F++ KH+L++HAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHIL
Sbjct: 115  ---CKWVRFISAKHVLMLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHIL 171

Query: 194  AISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAA 253
            AI+SCARQA +++GG+F MTGDVLPCFDA  M LPEDA+ I+TVPITLDIASNHGVIV +
Sbjct: 172  AIASCARQAFQDQGGLFIMTGDVLPCFDAFKMTLPEDAASIVTVPITLDIASNHGVIVTS 231

Query: 254  KDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSC 313
            K   L E+Y +SLV+DLLQKP V++L K  AIL DGR LLDTGII+ RG+AW +LV L C
Sbjct: 232  KSESLAESYTVSLVNDLLQKPTVEDLVKKDAILHDGRTLLDTGIISARGRAWSDLVALGC 291

Query: 314  SCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYEL 373
            SC PM+ EL+ S KEMSLYEDLVAAWVP++HDWL  RPLG+ LV+ LG+Q+M+SYC Y+L
Sbjct: 292  SCQPMILELIGSKKEMSLYEDLVAAWVPSRHDWLRTRPLGELLVNSLGRQKMYSYCTYDL 351

Query: 374  LFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDS 433
             FLHFGTSSEVLDHLSGD SG+VGRRHLCSIPATTVSDIAAS+V+LSS+IA GVSIGEDS
Sbjct: 352  QFLHFGTSSEVLDHLSGDASGIVGRRHLCSIPATTVSDIAASSVILSSEIAPGVSIGEDS 411

Query: 434  LIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLV 493
            LIYDS +S  +QIGS SIVVG + P E   T E SFRFMLPDRHCLWEVPLVG   RV+V
Sbjct: 412  LIYDSTVSGAVQIGSQSIVVGIHIPSEDLGTPE-SFRFMLPDRHCLWEVPLVGHKGRVIV 470

Query: 494  YCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYS 553
            YCGLHDNPKNS+ KDGTFCGKP +KV  DLGI+ESDLWSS  +Q++CLWNAK+FPIL+YS
Sbjct: 471  YCGLHDNPKNSIHKDGTFCGKPLEKVLFDLGIEESDLWSSYVAQDRCLWNAKLFPILTYS 530

Query: 554  EMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIA 613
            EML LA+WLMGL D +    + LW++S+RVSLEELH SI+F EMC GSSNHQADLA GIA
Sbjct: 531  EMLKLASWLMGLDDSRNKEKIKLWRSSQRVSLEELHGSINFPEMCNGSSNHQADLAGGIA 590

Query: 614  KACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVD 673
            KAC+NYGMLGRNLSQLC EILQKE  G++ICK+ LD CP+ Q+QNSKILPKSRAYQ +VD
Sbjct: 591  KACMNYGMLGRNLSQLCHEILQKESLGLEICKNFLDQCPKFQEQNSKILPKSRAYQVEVD 650

Query: 674  LLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDH 733
            LLRAC +E  A ELEHKVW AVA+ETASA++YGFRE+LLE  S G S  +N      + H
Sbjct: 651  LLRACGDEAKAIELEHKVWGAVAEETASAVRYGFREHLLE--SSGKSHSENH-----ISH 703

Query: 734  P---FQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKM 790
            P   FQPR  KVELPVR+DF GGWSDTPPWSLERAG VLN+AI+LE SLPIGTIIETT  
Sbjct: 704  PDRVFQPRRTKVELPVRVDFVGGWSDTPPWSLERAGYVLNMAITLEGSLPIGTIIETTNQ 763

Query: 791  SGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWA 850
             G+ I DDAGN+LHIED   I TPF+ NDPFRLVKSALLVTG++ E  ++S GL I+TWA
Sbjct: 764  MGISIQDDAGNELHIEDPISIKTPFEVNDPFRLVKSALLVTGIVQENFVDSTGLAIKTWA 823

Query: 851  NVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLY 910
            NVPRGSGLGTSSILAAAVVK LLQI++GD+SNEN+ARLVL+LEQLMGTGGGWQDQIGGLY
Sbjct: 824  NVPRGSGLGTSSILAAAVVKGLLQISNGDESNENIARLVLVLEQLMGTGGGWQDQIGGLY 883

Query: 911  PGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQR 970
            PGIKFTSSFPGIP+RLQV+PLLASPQLI EL+QRLLVVFTGQVRLAHQVL KVVTRYLQR
Sbjct: 884  PGIKFTSSFPGIPMRLQVVPLLASPQLISELEQRLLVVFTGQVRLAHQVLHKVVTRYLQR 943

Query: 971  DNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFA 1030
            DNLLISSIKRLTELAK+GR+ALMNC+VDE+G IM EAWRLHQELDP+CSNEFVD+LF F+
Sbjct: 944  DNLLISSIKRLTELAKSGREALMNCEVDEVGDIMSEAWRLHQELDPYCSNEFVDKLFEFS 1003

Query: 1031 DPYCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNI 1080
             PY  G+KLVGAGGGGF+L+LAKDAE A ELR+ LE+ + F+ +VYNW+I
Sbjct: 1004 QPYSSGFKLVGAGGGGFSLILAKDAEKAKELRQRLEEHAEFDVKVYNWSI 1053
Bifunctional enzyme involved in the salvage pathway which converts free L-fucose to GDP-L-fucose. The sugar-1-kinase activity has a strict substrate specificity for L-fucose and ATP. The pyrophosphorylase activity has a strict substrate specificity for L-fucose 1-phosphate and GTP.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 7EC: .EC: 3EC: 0
>sp|Q8N0W3|FUK_HUMAN L-fucose kinase OS=Homo sapiens GN=FUK PE=2 SV=2 Back     alignment and function description
>sp|O14772|FPGT_HUMAN Fucose-1-phosphate guanylyltransferase OS=Homo sapiens GN=FPGT PE=1 SV=2 Back     alignment and function description
>sp|Q9LY82|GLAK2_ARATH Probable glucuronokinase 2 OS=Arabidopsis thaliana GN=GLCAK2 PE=2 SV=1 Back     alignment and function description
>sp|Q8U0F3|KIME_PYRFU Mevalonate kinase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=mvk PE=3 SV=1 Back     alignment and function description
>sp|Q5JJC6|KIME_PYRKO Mevalonate kinase OS=Pyrococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=mvk PE=3 SV=1 Back     alignment and function description
>sp|Q93ZC9|GLAK1_ARATH Glucuronokinase 1 OS=Arabidopsis thaliana GN=GLCAK1 PE=1 SV=1 Back     alignment and function description
>sp|Q9V187|KIME_PYRAB Mevalonate kinase OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=mvk PE=3 SV=1 Back     alignment and function description
>sp|C6A3T5|KIME_THESM Mevalonate kinase OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=mvk PE=3 SV=1 Back     alignment and function description
>sp|O59291|KIME_PYRHO Mevalonate kinase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=mvk PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1084
183788101055 L-fucokinase/GDP-L-fucose pyrophosphoryl 0.964 0.991 0.749 0.0
2978484021055 hypothetical protein ARALYDRAFT_470155 [ 0.967 0.994 0.747 0.0
2977455041083 unnamed protein product [Vitis vinifera] 0.983 0.984 0.754 0.0
2254709621079 PREDICTED: bifunctional fucokinase/fucos 0.981 0.986 0.754 0.0
4494330201065 PREDICTED: LOW QUALITY PROTEIN: bifuncti 0.977 0.995 0.751 0.0
96651491113 Hypothetical protein [Arabidopsis thalia 0.964 0.939 0.710 0.0
3565712541049 PREDICTED: bifunctional fucokinase/fucos 0.957 0.989 0.747 0.0
3565041851056 PREDICTED: bifunctional fucokinase/fucos 0.973 0.999 0.731 0.0
1154502971072 Os03g0115100 [Oryza sativa Japonica Grou 0.963 0.973 0.659 0.0
255564617873 ATP binding protein, putative [Ricinus c 0.804 0.998 0.801 0.0
>gi|18378810|ref|NP_563620.1| L-fucokinase/GDP-L-fucose pyrophosphorylase [Arabidopsis thaliana] gi|332313388|sp|Q9LNJ9.2|FKGP_ARATH RecName: Full=Bifunctional fucokinase/fucose pyrophosphorylase; Short=AtFKGP; Includes: RecName: Full=L-fucokinase; Includes: RecName: Full=Fucose-1-phosphate guanylyltransferase; AltName: Full=GDP-fucose pyrophosphorylase gi|332189134|gb|AEE27255.1| L-fucokinase/GDP-L-fucose pyrophosphorylase [Arabidopsis thaliana] Back     alignment and taxonomy information
 Score = 1659 bits (4296), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 802/1070 (74%), Positives = 916/1070 (85%), Gaps = 24/1070 (2%)

Query: 15   KRAKADLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRI 74
            +R KADLA +LRKSWYHLRLSVRHP+RVPTWDAIVLTAASPEQAELY+WQLRRAKRMGRI
Sbjct: 4    QRKKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYDWQLRRAKRMGRI 63

Query: 75   ASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKLCLDIGPE-AIANGGNSGSFMKNE 133
            ASSTVTLAVPDPDG+RIGSGAATLNAI++LA HY+KL  D+GPE  +ANG          
Sbjct: 64   ASSTVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFDLGPEMEVANGA--------- 114

Query: 134  ESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHIL 193
                  V+F++ KH+L++HAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHIL
Sbjct: 115  ---CKWVRFISAKHVLMLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHIL 171

Query: 194  AISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAA 253
            AI+SCARQA +++GG+F MTGDVLPCFDA  M LPEDA+ I+TVPITLDIASNHGVIV +
Sbjct: 172  AIASCARQAFQDQGGLFIMTGDVLPCFDAFKMTLPEDAASIVTVPITLDIASNHGVIVTS 231

Query: 254  KDGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSC 313
            K   L E+Y +SLV+DLLQKP V++L K  AIL DGR LLDTGII+ RG+AW +LV L C
Sbjct: 232  KSESLAESYTVSLVNDLLQKPTVEDLVKKDAILHDGRTLLDTGIISARGRAWSDLVALGC 291

Query: 314  SCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYEL 373
            SC PM+ EL+ S KEMSLYEDLVAAWVP++HDWL  RPLG+ LV+ LG+Q+M+SYC Y+L
Sbjct: 292  SCQPMILELIGSKKEMSLYEDLVAAWVPSRHDWLRTRPLGELLVNSLGRQKMYSYCTYDL 351

Query: 374  LFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDS 433
             FLHFGTSSEVLDHLSGD SG+VGRRHLCSIPATTVSDIAAS+V+LSS+IA GVSIGEDS
Sbjct: 352  QFLHFGTSSEVLDHLSGDASGIVGRRHLCSIPATTVSDIAASSVILSSEIAPGVSIGEDS 411

Query: 434  LIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLV 493
            LIYDS +S  +QIGS SIVVG + P E   T E SFRFMLPDRHCLWEVPLVG   RV+V
Sbjct: 412  LIYDSTVSGAVQIGSQSIVVGIHIPSEDLGTPE-SFRFMLPDRHCLWEVPLVGHKGRVIV 470

Query: 494  YCGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYS 553
            YCGLHDNPKNS+ KDGTFCGKP +KV  DLGI+ESDLWSS  +Q++CLWNAK+FPIL+YS
Sbjct: 471  YCGLHDNPKNSIHKDGTFCGKPLEKVLFDLGIEESDLWSSYVAQDRCLWNAKLFPILTYS 530

Query: 554  EMLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIA 613
            EML LA+WLMGL D +    + LW++S+RVSLEELH SI+F EMC GSSNHQADLA GIA
Sbjct: 531  EMLKLASWLMGLDDSRNKEKIKLWRSSQRVSLEELHGSINFPEMCNGSSNHQADLAGGIA 590

Query: 614  KACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVD 673
            KAC+NYGMLGRNLSQLC EILQKE  G++ICK+ LD CP+ Q+QNSKILPKSRAYQ +VD
Sbjct: 591  KACMNYGMLGRNLSQLCHEILQKESLGLEICKNFLDQCPKFQEQNSKILPKSRAYQVEVD 650

Query: 674  LLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDH 733
            LLRAC +E  A ELEHKVW AVA+ETASA++YGFRE+LLE  S G S  +N      + H
Sbjct: 651  LLRACGDEAKAIELEHKVWGAVAEETASAVRYGFREHLLE--SSGKSHSENH-----ISH 703

Query: 734  P---FQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKM 790
            P   FQPR  KVELPVR+DF GGWSDTPPWSLERAG VLN+AI+LE SLPIGTIIETT  
Sbjct: 704  PDRVFQPRRTKVELPVRVDFVGGWSDTPPWSLERAGYVLNMAITLEGSLPIGTIIETTNQ 763

Query: 791  SGVLISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWA 850
             G+ I DDAGN+LHIED   I TPF+ NDPFRLVKSALLVTG++ E  ++S GL I+TWA
Sbjct: 764  MGISIQDDAGNELHIEDPISIKTPFEVNDPFRLVKSALLVTGIVQENFVDSTGLAIKTWA 823

Query: 851  NVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMGTGGGWQDQIGGLY 910
            NVPRGSGLGTSSILAAAVVK LLQI++GD+SNEN+ARLVL+LEQLMGTGGGWQDQIGGLY
Sbjct: 824  NVPRGSGLGTSSILAAAVVKGLLQISNGDESNENIARLVLVLEQLMGTGGGWQDQIGGLY 883

Query: 911  PGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQR 970
            PGIKFTSSFPGIP+RLQV+PLLASPQLI EL+QRLLVVFTGQVRLAHQVL KVVTRYLQR
Sbjct: 884  PGIKFTSSFPGIPMRLQVVPLLASPQLISELEQRLLVVFTGQVRLAHQVLHKVVTRYLQR 943

Query: 971  DNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFA 1030
            DNLLISSIKRLTELAK+GR+ALMNC+VDE+G IM EAWRLHQELDP+CSNEFVD+LF F+
Sbjct: 944  DNLLISSIKRLTELAKSGREALMNCEVDEVGDIMSEAWRLHQELDPYCSNEFVDKLFEFS 1003

Query: 1031 DPYCCGYKLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNI 1080
             PY  G+KLVGAGGGGF+L+LAKDAE A ELR+ LE+ + F+ +VYNW+I
Sbjct: 1004 QPYSSGFKLVGAGGGGFSLILAKDAEKAKELRQRLEEHAEFDVKVYNWSI 1053

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|297848402|ref|XP_002892082.1| hypothetical protein ARALYDRAFT_470155 [Arabidopsis lyrata subsp. lyrata] gi|297337924|gb|EFH68341.1| hypothetical protein ARALYDRAFT_470155 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|297745504|emb|CBI40584.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225470962|ref|XP_002264541.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|449433020|ref|XP_004134296.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional fucokinase/fucose pyrophosphorylase-like [Cucumis sativus] gi|449478213|ref|XP_004155252.1| PREDICTED: LOW QUALITY PROTEIN: bifunctional fucokinase/fucose pyrophosphorylase-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|9665149|gb|AAF97333.1|AC023628_14 Hypothetical protein [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|356571254|ref|XP_003553794.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like [Glycine max] Back     alignment and taxonomy information
>gi|356504185|ref|XP_003520879.1| PREDICTED: bifunctional fucokinase/fucose pyrophosphorylase-like [Glycine max] Back     alignment and taxonomy information
>gi|115450297|ref|NP_001048749.1| Os03g0115100 [Oryza sativa Japonica Group] gi|27476100|gb|AAO17031.1| Hypothetical protein [Oryza sativa Japonica Group] gi|108705845|gb|ABF93640.1| GHMP kinases putative ATP-binding protein, expressed [Oryza sativa Japonica Group] gi|113547220|dbj|BAF10663.1| Os03g0115100 [Oryza sativa Japonica Group] gi|215768089|dbj|BAH00318.1| unnamed protein product [Oryza sativa Japonica Group] Back     alignment and taxonomy information
>gi|255564617|ref|XP_002523303.1| ATP binding protein, putative [Ricinus communis] gi|223537391|gb|EEF39019.1| ATP binding protein, putative [Ricinus communis] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1084
TAIR|locus:20353621055 FKGP "AT1G01220" [Arabidopsis 0.968 0.995 0.719 0.0
UNIPROTKB|Q8N0W31084 FUK "L-fucose kinase" [Homo sa 0.321 0.321 0.264 2e-45
UNIPROTKB|A6QP441079 FUK "FUK protein" [Bos taurus 0.318 0.319 0.272 2.4e-42
UNIPROTKB|E2RR421079 FUK "Uncharacterized protein" 0.318 0.319 0.267 4.4e-39
UNIPROTKB|I3LTC21064 FUK "Uncharacterized protein" 0.239 0.244 0.260 2.9e-32
RGD|1307000626 Fuk "fucokinase" [Rattus norve 0.240 0.416 0.307 1.4e-30
UNIPROTKB|J3KSP6575 FUK "Fucokinase, isoform CRA_d 0.321 0.605 0.264 1.3e-27
UNIPROTKB|F1NH45971 F1NH45 "Uncharacterized protei 0.228 0.255 0.294 1.6e-26
DICTYBASE|DDB_G02696781404 fuk "fucokinase" [Dictyosteliu 0.232 0.179 0.251 1.8e-22
WB|WBGene00007745839 C26D10.4 [Caenorhabditis elega 0.204 0.264 0.348 1.2e-19
TAIR|locus:2035362 FKGP "AT1G01220" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3978 (1405.4 bits), Expect = 0., P = 0.
 Identities = 767/1066 (71%), Positives = 877/1066 (82%)

Query:    15 KRAKADLAAILRKSWYHLRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRI 74
             +R KADLA +LRKSWYHLRLSVRHP+RVPTWDAIVLTAASPEQAELY+WQLRRAKRMGRI
Sbjct:     4 QRKKADLATVLRKSWYHLRLSVRHPTRVPTWDAIVLTAASPEQAELYDWQLRRAKRMGRI 63

Query:    75 ASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKLCLDIGPEAIANGGNSGSFMKNEE 134
             ASSTVTLAVPDPDG+RIGSGAATLNAI++LA HY+KL  D+GPE           M+   
Sbjct:    64 ASSTVTLAVPDPDGKRIGSGAATLNAIYALARHYEKLGFDLGPE-----------MEVAN 112

Query:   135 SLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILA 194
                  V+F++ KH+L++HAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILA
Sbjct:   113 GACKWVRFISAKHVLMLHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILA 172

Query:   195 ISSCARQALKNEGGIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAK 254
             I+SCARQA +++GG+F MTGDVLPCFDA  M LPEDA+ I+TVPITLDIASNHGVIV +K
Sbjct:   173 IASCARQAFQDQGGLFIMTGDVLPCFDAFKMTLPEDAASIVTVPITLDIASNHGVIVTSK 232

Query:   255 DGILNENYALSLVDDLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCS 314
                L E+Y +SLV+DLLQKP V++L K  AIL DGR LLDTGII+ RG+AW +LV L CS
Sbjct:   233 SESLAESYTVSLVNDLLQKPTVEDLVKKDAILHDGRTLLDTGIISARGRAWSDLVALGCS 292

Query:   315 CPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLMLRPLGKELVSKLGKQRMFSYCAYELL 374
             C PM+ EL+ S KEMSLYEDLVAAWVP++HDWL  RPLG+ LV+ LG+Q+M+SYC Y+L 
Sbjct:   293 CQPMILELIGSKKEMSLYEDLVAAWVPSRHDWLRTRPLGELLVNSLGRQKMYSYCTYDLQ 352

Query:   375 FLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDSL 434
             FLHFGTSSEVLDHLSGD SG+VGRRHLCSIPATTVSDIAAS+V+LSS+IA GVSIGEDSL
Sbjct:   353 FLHFGTSSEVLDHLSGDASGIVGRRHLCSIPATTVSDIAASSVILSSEIAPGVSIGEDSL 412

Query:   435 IYDSNXXXXXXXXXXXXXXXTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVY 494
             IYDS                 + P E   T E SFRFMLPDRHCLWEVPLVG   RV+VY
Sbjct:   413 IYDSTVSGAVQIGSQSIVVGIHIPSEDLGTPE-SFRFMLPDRHCLWEVPLVGHKGRVIVY 471

Query:   495 CGLHDNPKNSLTKDGTFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSE 554
             CGLHDNPKNS+ KDGTFCGKP +KV  DLGI+ESDLWSS  +Q++CLWNAK+FPIL+YSE
Sbjct:   472 CGLHDNPKNSIHKDGTFCGKPLEKVLFDLGIEESDLWSSYVAQDRCLWNAKLFPILTYSE 531

Query:   555 MLTLATWLMGLSDHKTGFLLPLWKNSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAK 614
             ML LA+WLMGL D +    + LW++S+RVSLEELH SI+F EMC GSSNHQADLA GIAK
Sbjct:   532 MLKLASWLMGLDDSRNKEKIKLWRSSQRVSLEELHGSINFPEMCNGSSNHQADLAGGIAK 591

Query:   615 ACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQNSKILPKSRAYQAQVDL 674
             AC+NYGMLGRNLSQLC EILQKE  G++ICK+ LD CP+ Q+QNSKILPKSRAYQ +VDL
Sbjct:   592 ACMNYGMLGRNLSQLCHEILQKESLGLEICKNFLDQCPKFQEQNSKILPKSRAYQVEVDL 651

Query:   675 LRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDHP 734
             LRAC +E  A ELEHKVW AVA+ETASA++YGFRE+LLE  S G S   ++N     D  
Sbjct:   652 LRACGDEAKAIELEHKVWGAVAEETASAVRYGFREHLLE--SSGKS--HSENHISHPDRV 707

Query:   735 FQPRTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVL 794
             FQPR  KVELPVR+DF GGWSDTPPWSLERAG VLN+AI+LE SLPIGTIIETT   G+ 
Sbjct:   708 FQPRRTKVELPVRVDFVGGWSDTPPWSLERAGYVLNMAITLEGSLPIGTIIETTNQMGIS 767

Query:   795 ISDDAGNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPR 854
             I DDAGN+LHIED   I TPF+ NDPFRLVKSALLVTG++ E  ++S GL I+TWANVPR
Sbjct:   768 IQDDAGNELHIEDPISIKTPFEVNDPFRLVKSALLVTGIVQENFVDSTGLAIKTWANVPR 827

Query:   855 GSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQLMXXXXXXXXXXXXLYPGIK 914
             GSGLGTSSILAAAVVK LLQI++GD+SNEN+ARLVL+LEQLM            LYPGIK
Sbjct:   828 GSGLGTSSILAAAVVKGLLQISNGDESNENIARLVLVLEQLMGTGGGWQDQIGGLYPGIK 887

Query:   915 FTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLL 974
             FTSSFPGIP+RLQV+PLLASPQLI EL+QRLLVVFTGQVRLAHQVL KVVTRYLQRDNLL
Sbjct:   888 FTSSFPGIPMRLQVVPLLASPQLISELEQRLLVVFTGQVRLAHQVLHKVVTRYLQRDNLL 947

Query:   975 ISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYC 1034
             ISSIKRLTELAK+GR+ALMNC+VDE+G IM EAWRLHQELDP+CSNEFVD+LF F+ PY 
Sbjct:   948 ISSIKRLTELAKSGREALMNCEVDEVGDIMSEAWRLHQELDPYCSNEFVDKLFEFSQPYS 1007

Query:  1035 CGYKLVXXXXXXXXXXXXKDAESATELRRMLEKDSNFNSEVYNWNI 1080
              G+KLV            KDAE A ELR+ LE+ + F+ +VYNW+I
Sbjct:  1008 SGFKLVGAGGGGFSLILAKDAEKAKELRQRLEEHAEFDVKVYNWSI 1053
GO:0004335 "galactokinase activity" evidence=ISS
GO:0005524 "ATP binding" evidence=IEA;ISS
GO:0005737 "cytoplasm" evidence=ISM
GO:0008152 "metabolic process" evidence=IEA
GO:0016301 "kinase activity" evidence=IEA
GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA
GO:0016773 "phosphotransferase activity, alcohol group as acceptor" evidence=IEA
GO:0042352 "GDP-L-fucose salvage" evidence=IDA
GO:0047341 "fucose-1-phosphate guanylyltransferase activity" evidence=IDA
GO:0050201 "fucokinase activity" evidence=IDA
GO:0030244 "cellulose biosynthetic process" evidence=RCA
GO:0048193 "Golgi vesicle transport" evidence=RCA
UNIPROTKB|Q8N0W3 FUK "L-fucose kinase" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|A6QP44 FUK "FUK protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|E2RR42 FUK "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|I3LTC2 FUK "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
RGD|1307000 Fuk "fucokinase" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|J3KSP6 FUK "Fucokinase, isoform CRA_d" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|F1NH45 F1NH45 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269678 fuk "fucokinase" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
WB|WBGene00007745 C26D10.4 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9LNJ9FKGP_ARATH2, ., 7, ., 7, ., 3, 00.74950.96490.9914yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer2.7.1LOW CONFIDENCE prediction!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
AT1G01220
GHMP kinase-related; GHMP kinase-related; FUNCTIONS IN- kinase activity, phosphotransferase activity, alcohol group as acceptor, galactokinase activity, ATP binding; INVOLVED IN- metabolic process, phosphorylation; LOCATED IN- cytoplasm; EXPRESSED IN- 22 plant structures; EXPRESSED DURING- 13 growth stages; CONTAINS InterPro DOMAIN/s- Mevalonate and galactokinase (InterPro-IPR006206), GHMP kinase (InterPro-IPR006204), L-fucokinase (InterPro-IPR012887), Ribosomal protein S5 domain 2-type fold (InterPro-IPR014721), GHMP kinase, C-terminal (InterPro-IPR013750); Has 1240 Blast hits to 1200 [...] (1055 aa)
(Arabidopsis thaliana)
Predicted Functional Partners:
AT2G35020
UTP--glucose-1-phosphate uridylyltransferase family protein; UTP--glucose-1-phosphate uridylylt [...] (502 aa)
      • 0.929
AT1G07360
zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein; zinc f [...] (481 aa)
      • 0.911
AT3G42850
galactokinase, putative; galactokinase, putative; FUNCTIONS IN- kinase activity, phosphotransfe [...] (964 aa)
      • 0.825
ARA1
ARA1 (ARABINOSE KINASE); ATP binding / L-arabinokinase/ galactokinase; Similar to galactokinase [...] (1039 aa)
      • 0.819
AT5G57655
xylose isomerase family protein; xylose isomerase family protein; FUNCTIONS IN- xylose isomeras [...] (477 aa)
     •  0.800
AT5G51970
sorbitol dehydrogenase, putative / L-iditol 2-dehydrogenase, putative; Encodes a putative sorbi [...] (364 aa)
     •  0.800
AT5G51830
pfkB-type carbohydrate kinase family protein; pfkB-type carbohydrate kinase family protein; FUN [...] (343 aa)
     •  0.800
HKL3
HKL3 (HEXOKINASE-LIKE 3); ATP binding / fructokinase/ glucokinase/ hexokinase; Encodes a putati [...] (493 aa)
     •  0.800
HXK1
HXK1 (HEXOKINASE 1); ATP binding / fructokinase/ glucokinase/ hexokinase; Encodes a hexokinase [...] (496 aa)
     •  0.800
AT4G10260
pfkB-type carbohydrate kinase family protein; pfkB-type carbohydrate kinase family protein; FUN [...] (324 aa)
     •  0.800

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1084
pfam07959414 pfam07959, Fucokinase, L-fucokinase 1e-156
PRK13412974 PRK13412, fkp, bifunctional fucokinase/L-fucose-1- 7e-96
COG2605333 COG2605, COG2605, Predicted kinase related to gala 5e-41
COG1577307 COG1577, ERG12, Mevalonate kinase [Lipid metabolis 4e-15
TIGR00549274 TIGR00549, mevalon_kin, mevalonate kinase 4e-11
pfam0028867 pfam00288, GHMP_kinases_N, GHMP kinases N terminal 1e-09
COG0153390 COG0153, GalK, Galactokinase [Carbohydrate transpo 7e-07
pfam0854486 pfam08544, GHMP_kinases_C, GHMP kinases C terminal 7e-07
PRK03817351 PRK03817, PRK03817, galactokinase; Provisional 9e-06
COG1685278 COG1685, COG1685, Archaeal shikimate kinase [Amino 0.004
>gnl|CDD|219665 pfam07959, Fucokinase, L-fucokinase Back     alignment and domain information 
 Score =  468 bits (1207), Expect = e-156
 Identities = 163/422 (38%), Positives = 227/422 (53%), Gaps = 28/422 (6%)

Query: 153 AGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPLLFDHILAISSCARQALKNEG--GIF 210
           AGG S+R+P A+P+GK+F PLP LA   PDGPVPLL D++L +     Q    +   G+ 
Sbjct: 1   AGGYSRRLPNASPLGKIFTPLPVLA---PDGPVPLLGDNLLELKLAMYQRFPPQMPPGVL 57

Query: 211 TMTGD-VLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVDD 269
             +GD +L   DA  +   E  +  +  P +L IA+NHGV V    G L  +    LVDD
Sbjct: 58  VTSGDELLSVGDAPGISFDEPGATALAHPSSLAIATNHGVFVTDSQGSLAHDLTYRLVDD 117

Query: 270 LLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMV---SELLKSG 326
            LQKP ++EL + +A+  DG  LLDTGI+++ G+A E L  +  S   M+    EL+ + 
Sbjct: 118 FLQKPTIEELVQFNAVGRDGLFLLDTGILSLSGEAVESLFAMDHSSAKMLLTYYELIGAL 177

Query: 327 K-EMSLYEDLVAAWVP---AKHDWLMLRPLGKELVSKLG---------KQRMFSYCAYEL 373
           K E+SLY D + A  P    +H  L  R + +E   KL             +      + 
Sbjct: 178 KCEISLYGDFLLALGPGATREHPRLTSRVMKEESYLKLMRQKIFHLLKGTPLNVVVLPDG 237

Query: 374 LFLHFGTSSEVLDHLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSSKIAHGVSIGEDS 433
            F HFGTS+E LDHL+ D    VG RH  S PA T  DIAA++V+LSS +  GVS+G  S
Sbjct: 238 GFYHFGTSAEYLDHLTSDSGLGVGVRHFSSSPAITPQDIAATSVILSSLLDSGVSVGPGS 297

Query: 434 LIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLV 493
           ++  S++   ++IGS  IV G +        A       LPD  C   V L G  ERV +
Sbjct: 298 VVEYSHLGGPVRIGSNCIVSGVDILHSEALPAL-----ELPDFVCSLSVRLNGSLERVTM 352

Query: 494 YCGLHDNPKNSLTKDG-TFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSY 552
           Y GL DN K S+  D  TF G  +       GI+++DLW ST   ++CLW A++FP+L+ 
Sbjct: 353 YFGLQDNLKGSVKTDALTFLGVSFLSCLKKWGIKDTDLWFSTNKSDRCLWTARLFPVLTS 412

Query: 553 SE 554
            E
Sbjct: 413 LE 414

In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-fucokinase to form L-fucose-L-phosphate, which is then further converted to GDP-L-fucose in the reaction catalyzed by GDP-L-fucose pyrophosphorylase. Length = 414
>gnl|CDD|237379 PRK13412, fkp, bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional Back     alignment and domain information
>gnl|CDD|225325 COG2605, COG2605, Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only] Back     alignment and domain information
>gnl|CDD|224493 COG1577, ERG12, Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>gnl|CDD|233017 TIGR00549, mevalon_kin, mevalonate kinase Back     alignment and domain information
>gnl|CDD|215839 pfam00288, GHMP_kinases_N, GHMP kinases N terminal domain Back     alignment and domain information
>gnl|CDD|223231 COG0153, GalK, Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>gnl|CDD|219894 pfam08544, GHMP_kinases_C, GHMP kinases C terminal Back     alignment and domain information
>gnl|CDD|235163 PRK03817, PRK03817, galactokinase; Provisional Back     alignment and domain information
>gnl|CDD|224599 COG1685, COG1685, Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1084
PRK13412974 fkp bifunctional fucokinase/L-fucose-1-P-guanylylt 100.0
KOG4644948 consensus L-fucose kinase [Carbohydrate transport 100.0
PF07959414 Fucokinase: L-fucokinase; InterPro: IPR012887 In t 100.0
COG2605333 Predicted kinase related to galactokinase and meva 100.0
COG0448393 GlgC ADP-glucose pyrophosphorylase [Carbohydrate t 100.0
COG0153390 GalK Galactokinase [Carbohydrate transport and met 100.0
PRK05101382 galactokinase; Provisional 100.0
PRK00555363 galactokinase; Provisional 100.0
PRK05322387 galactokinase; Provisional 100.0
PLN02865423 galactokinase 100.0
PTZ00290468 galactokinase; Provisional 100.0
TIGR00131386 gal_kin galactokinase. The galactokinases found by 100.0
TIGR01220358 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-typ 100.0
PLN02521497 galactokinase 100.0
TIGR00549273 mevalon_kin mevalonate kinase. Paracoccus exhibits 100.0
PLN02677387 mevalonate kinase 100.0
PRK03817351 galactokinase; Provisional 100.0
COG1577307 ERG12 Mevalonate kinase [Lipid metabolism] 100.0
PRK03926302 mevalonate kinase; Provisional 100.0
PTZ00298328 mevalonate kinase; Provisional 100.0
KOG1511397 consensus Mevalonate kinase MVK/ERG12 [Lipid trans 99.96
PRK00128286 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.93
PLN02451370 homoserine kinase 99.93
COG0083299 ThrB Homoserine kinase [Amino acid transport and m 99.92
KOG0631489 consensus Galactokinase [Carbohydrate transport an 99.92
PRK02534312 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.91
PRK01212301 homoserine kinase; Provisional 99.91
TIGR00154293 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kin 99.91
PTZ00299336 homoserine kinase; Provisional 99.9
TIGR00191302 thrB homoserine kinase. P.aeruginosa homoserine ki 99.9
TIGR01219454 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, 99.89
PRK03188300 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.87
PRK01123282 shikimate kinase; Provisional 99.86
PRK14614280 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.84
PRK14615296 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.83
PRK14616287 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.83
PRK14608290 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.83
TIGR01920261 Shik_kin_archae shikimate kinase. This model repre 99.83
PRK14611275 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.82
PRK14612276 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.81
PRK14613297 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.8
KOG1322371 consensus GDP-mannose pyrophosphorylase/mannose-1- 99.78
PRK00343271 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kin 99.78
TIGR00144324 beta_RFAP_syn beta-RFAP synthase. This protein fam 99.78
PRK00725425 glgC glucose-1-phosphate adenylyltransferase; Prov 99.77
PRK14609269 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.77
COG1947289 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-p 99.76
PRK00844407 glgC glucose-1-phosphate adenylyltransferase; Prov 99.75
PRK14610283 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.75
PRK02862429 glgC glucose-1-phosphate adenylyltransferase; Prov 99.71
PRK00650288 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.7
PRK05293380 glgC glucose-1-phosphate adenylyltransferase; Prov 99.69
PLN02241436 glucose-1-phosphate adenylyltransferase 99.66
TIGR02091361 glgC glucose-1-phosphate adenylyltransferase. This 99.6
PRK05905258 hypothetical protein; Provisional 99.59
COG1685278 Archaeal shikimate kinase [Amino acid transport an 99.52
PRK04181257 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.51
TIGR01240305 mevDPdecarb diphosphomevalonate decarboxylase. Alt 99.44
TIGR02092369 glgD glucose-1-phosphate adenylyltransferase, GlgD 99.42
COG1907312 Predicted archaeal sugar kinases [General function 99.36
PF0028867 GHMP_kinases_N: GHMP kinases N terminal domain; In 99.31
COG3890337 ERG8 Phosphomevalonate kinase [Lipid metabolism] 99.29
COG4542293 PduX Protein involved in propanediol utilization, 99.29
TIGR01208353 rmlA_long glucose-1-phosphate thymidylylransferase 99.19
COG1829283 Predicted archaeal kinase (sugar kinase superfamil 99.11
PRK09451456 glmU bifunctional N-acetylglucosamine-1-phosphate 99.1
PF0854485 GHMP_kinases_C: GHMP kinases C terminal ; InterPro 99.08
COG1208358 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas 99.08
PLN02407343 diphosphomevalonate decarboxylase 99.01
PRK14355459 glmU bifunctional N-acetylglucosamine-1-phosphate 99.0
PRK14358481 glmU bifunctional N-acetylglucosamine-1-phosphate 98.97
COG3407329 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid 98.95
PRK14356456 glmU bifunctional N-acetylglucosamine-1-phosphate 98.89
KOG1460407 consensus GDP-mannose pyrophosphorylase [Carbohydr 98.87
TIGR01173451 glmU UDP-N-acetylglucosamine diphosphorylase/gluco 98.81
PRK14353446 glmU bifunctional N-acetylglucosamine-1-phosphate 98.8
PRK14352482 glmU bifunctional N-acetylglucosamine-1-phosphate 98.78
PRK14357448 glmU bifunctional N-acetylglucosamine-1-phosphate 98.76
PF1050952 GalKase_gal_bdg: Galactokinase galactose-binding s 98.74
PRK14360450 glmU bifunctional N-acetylglucosamine-1-phosphate 98.73
PRK14359430 glmU bifunctional N-acetylglucosamine-1-phosphate 98.68
KOG4519459 consensus Phosphomevalonate kinase [Lipid transpor 98.62
PRK14354458 glmU bifunctional N-acetylglucosamine-1-phosphate 98.6
cd06428257 M1P_guanylylT_A_like_N N-terminal domain of M1P_gu 98.53
KOG1537355 consensus Homoserine kinase [Amino acid transport 98.48
KOG2833395 consensus Mevalonate pyrophosphate decarboxylase [ 98.44
PF00483248 NTP_transferase: Nucleotidyl transferase This Pros 98.35
KOG1462433 consensus Translation initiation factor 2B, gamma 98.32
COG1209286 RfbA dTDP-glucose pyrophosphorylase [Cell envelope 98.31
KOG1461673 consensus Translation initiation factor 2B, epsilo 98.26
COG1207460 GlmU N-acetylglucosamine-1-phosphate uridyltransfe 98.21
cd06425233 M1P_guanylylT_B_like_N N-terminal domain of the M1 98.01
cd0465281 LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal 98.0
cd04651104 LbH_G1P_AT_C Glucose-1-phosphate adenylyltransfera 97.93
TIGR01099260 galU UTP-glucose-1-phosphate uridylyltransferase. 97.9
cd04181217 NTP_transferase NTP_transferases catalyze the tran 97.89
TIGR02623254 G1P_cyt_trans glucose-1-phosphate cytidylyltransfe 97.8
KOG1461673 consensus Translation initiation factor 2B, epsilo 97.75
cd0335679 LbH_G1P_AT_C_like Left-handed parallel beta-Helix 97.59
PRK15480292 glucose-1-phosphate thymidylyltransferase RfbA; Pr 97.59
COG0448393 GlgC ADP-glucose pyrophosphorylase [Carbohydrate t 97.58
cd0465281 LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal 97.55
TIGR01207286 rmlA glucose-1-phosphate thymidylyltransferase, sh 97.54
cd0335679 LbH_G1P_AT_C_like Left-handed parallel beta-Helix 97.51
cd02541267 UGPase_prokaryotic Prokaryotic UGPase catalyses th 97.5
cd02509274 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransf 97.5
cd0578779 LbH_eIF2B_epsilon eIF-2B epsilon subunit, central 97.42
cd02538240 G1P_TT_short G1P_TT_short is the short form of glu 97.32
PRK13389302 UTP--glucose-1-phosphate uridylyltransferase subun 97.18
cd04651104 LbH_G1P_AT_C Glucose-1-phosphate adenylyltransfera 97.15
cd02524253 G1P_cytidylyltransferase G1P_cytidylyltransferase 97.14
cd0582480 LbH_M1P_guanylylT_C Mannose-1-phosphate guanylyltr 97.14
KOG1462433 consensus Translation initiation factor 2B, gamma 97.13
cd06915223 NTP_transferase_WcbM_like WcbM_like is a subfamily 97.09
cd04197217 eIF-2B_epsilon_N The N-terminal domain of epsilon 97.08
TIGR01105297 galF UTP-glucose-1-phosphate uridylyltransferase, 97.08
cd06422221 NTP_transferase_like_1 NTP_transferase_like_1 is a 97.02
PRK02862429 glgC glucose-1-phosphate adenylyltransferase; Prov 96.92
PRK10122297 GalU regulator GalF; Provisional 96.85
PRK00725425 glgC glucose-1-phosphate adenylyltransferase; Prov 96.84
cd0578779 LbH_eIF2B_epsilon eIF-2B epsilon subunit, central 96.83
TIGR02092369 glgD glucose-1-phosphate adenylyltransferase, GlgD 96.82
cd04189236 G1P_TT_long G1P_TT_long represents the long form o 96.82
PRK05293380 glgC glucose-1-phosphate adenylyltransferase; Prov 96.8
PRK00844407 glgC glucose-1-phosphate adenylyltransferase; Prov 96.59
cd0582480 LbH_M1P_guanylylT_C Mannose-1-phosphate guanylyltr 96.31
cd04183231 GT2_BcE_like GT2_BcbE_like is likely involved in t 96.2
cd06426220 NTP_transferase_like_2 NTP_trnasferase_like_2 is a 96.07
TIGR01479468 GMP_PMI mannose-1-phosphate guanylyltransferase/ma 96.01
cd02540229 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU 95.97
cd05636163 LbH_G1P_TT_C_like Putative glucose-1-phosphate thy 95.95
TIGR01208353 rmlA_long glucose-1-phosphate thymidylylransferase 95.93
cd02523229 PC_cytidylyltransferase Phosphocholine cytidylyltr 95.83
TIGR03308204 phn_thr-fam phosphonate metabolim protein, transfe 95.81
TIGR02091361 glgC glucose-1-phosphate adenylyltransferase. This 95.77
cd02507216 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma 95.66
cd04745155 LbH_paaY_like paaY-like: This group is composed by 95.53
PLN02472246 uncharacterized protein 95.51
cd04745155 LbH_paaY_like paaY-like: This group is composed by 95.41
cd05636163 LbH_G1P_TT_C_like Putative glucose-1-phosphate thy 95.36
cd04645153 LbH_gamma_CA_like Gamma carbonic anhydrase-like: T 95.34
PLN02241436 glucose-1-phosphate adenylyltransferase 95.14
TIGR02287192 PaaY phenylacetic acid degradation protein PaaY. M 95.1
PLN02296269 carbonate dehydratase 95.02
cd0020878 LbetaH Left-handed parallel beta-Helix (LbetaH or 94.94
TIGR02287192 PaaY phenylacetic acid degradation protein PaaY. M 94.87
TIGR01173451 glmU UDP-N-acetylglucosamine diphosphorylase/gluco 94.82
cd00710167 LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbo 94.71
PLN02296269 carbonate dehydratase 94.7
cd04650154 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP 94.7
PRK09451456 glmU bifunctional N-acetylglucosamine-1-phosphate 94.68
cd04645153 LbH_gamma_CA_like Gamma carbonic anhydrase-like: T 94.63
cd03353193 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyl 94.56
cd03353193 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyl 94.53
PRK14360450 glmU bifunctional N-acetylglucosamine-1-phosphate 94.39
PRK05450245 3-deoxy-manno-octulosonate cytidylyltransferase; P 94.31
PRK14356456 glmU bifunctional N-acetylglucosamine-1-phosphate 94.15
cd03360197 LbH_AT_putative Putative Acyltransferase (AT), Lef 93.94
PRK14355459 glmU bifunctional N-acetylglucosamine-1-phosphate 93.92
cd04650154 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP 93.86
PRK13627196 carnitine operon protein CaiE; Provisional 93.77
PRK13627196 carnitine operon protein CaiE; Provisional 93.75
TIGR03308204 phn_thr-fam phosphonate metabolim protein, transfe 93.72
cd05635101 LbH_unknown Uncharacterized proteins, Left-handed 93.6
cd03359161 LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynact 93.58
COG1210291 GalU UDP-glucose pyrophosphorylase [Cell envelope 93.48
cd03358119 LbH_WxcM_N_like WcxM-like, Left-handed parallel be 93.38
cd05635101 LbH_unknown Uncharacterized proteins, Left-handed 93.34
cd04646164 LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynact 93.28
PLN02472246 uncharacterized protein 93.27
PF0013236 Hexapep: Bacterial transferase hexapeptide (six re 93.18
cd02517239 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes th 92.9
TIGR00965269 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate 92.88
cd03357169 LbH_MAT_GAT Maltose O-acetyltransferase (MAT) and 92.7
TIGR00965269 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate 92.69
TIGR03532231 DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxyla 92.5
PRK14353446 glmU bifunctional N-acetylglucosamine-1-phosphate 92.36
PRK14359430 glmU bifunctional N-acetylglucosamine-1-phosphate 92.1
cd03358119 LbH_WxcM_N_like WcxM-like, Left-handed parallel be 92.09
cd03360197 LbH_AT_putative Putative Acyltransferase (AT), Lef 91.87
PRK14358481 glmU bifunctional N-acetylglucosamine-1-phosphate 91.77
PRK14354458 glmU bifunctional N-acetylglucosamine-1-phosphate 91.68
cd03359161 LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynact 91.59
COG1208358 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylas 91.29
COG0836333 {ManC} Mannose-1-phosphate guanylyltransferase [Ce 90.84
PRK11830272 dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N- 90.72
cd0020878 LbetaH Left-handed parallel beta-Helix (LbetaH or 90.62
PRK10092183 maltose O-acetyltransferase; Provisional 90.54
cd04647109 LbH_MAT_like Maltose O-acyltransferase (MAT)-like: 90.35
cd04646164 LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynact 90.02
cd00710167 LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbo 89.95
cd03352205 LbH_LpxD UDP-3-O-acyl-glucosamine N-acyltransferas 89.41
cd03350139 LbH_THP_succinylT 2,3,4,5-tetrahydropyridine-2,6-d 89.41
TIGR03570201 NeuD_NnaD sugar O-acyltransferase, sialic acid O-a 89.35
TIGR01853324 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosam 89.27
TIGR01853324 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosam 89.12
COG0663176 PaaY Carbonic anhydrases/acetyltransferases, isole 89.01
cd02508200 ADP_Glucose_PP ADP-glucose pyrophosphorylase is in 88.76
TIGR03570201 NeuD_NnaD sugar O-acyltransferase, sialic acid O-a 88.76
cd04647109 LbH_MAT_like Maltose O-acyltransferase (MAT)-like: 88.36
PLN02694294 serine O-acetyltransferase 88.34
PF1460234 Hexapep_2: Hexapeptide repeat of succinyl-transfer 88.34
cd04649147 LbH_THP_succinylT_putative Putative 2,3,4,5-tetrah 88.33
PRK14352482 glmU bifunctional N-acetylglucosamine-1-phosphate 88.13
PRK14357448 glmU bifunctional N-acetylglucosamine-1-phosphate 87.93
PLN02694294 serine O-acetyltransferase 87.75
TIGR03532231 DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxyla 87.65
PRK05289262 UDP-N-acetylglucosamine acyltransferase; Provision 87.58
TIGR03536341 DapD_gpp 2,3,4,5-tetrahydropyridine-2,6-dicarboxyl 86.83
TIGR01172162 cysE serine O-acetyltransferase. Cysteine biosynth 86.77
TIGR01172162 cysE serine O-acetyltransferase. Cysteine biosynth 85.98
PLN02357360 serine acetyltransferase 85.73
KOG1460407 consensus GDP-mannose pyrophosphorylase [Carbohydr 85.23
COG1044338 LpxD UDP-3-O-[3-hydroxymyristoyl] 85.01
PLN02739355 serine acetyltransferase 84.72
PRK15460478 cpsB mannose-1-phosphate guanyltransferase; Provis 84.72
PRK11132273 cysE serine acetyltransferase; Provisional 84.58
PRK00892343 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-ac 83.43
COG0663176 PaaY Carbonic anhydrases/acetyltransferases, isole 83.23
PRK11830272 dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N- 82.83
cd04649147 LbH_THP_succinylT_putative Putative 2,3,4,5-tetrah 82.61
PRK09527203 lacA galactoside O-acetyltransferase; Reviewed 82.54
PRK05289262 UDP-N-acetylglucosamine acyltransferase; Provision 81.72
PRK00892343 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-ac 81.28
COG1207460 GlmU N-acetylglucosamine-1-phosphate uridyltransfe 81.28
PRK12461255 UDP-N-acetylglucosamine acyltransferase; Provision 80.9
cd03351254 LbH_UDP-GlcNAc_AT UDP-N-acetylglucosamine O-acyltr 80.74
TIGR01852254 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-ac 80.44
cd04198214 eIF-2B_gamma_N The N-terminal domain of gamma subu 80.36
PLN02357360 serine acetyltransferase 80.2
PRK09677192 putative lipopolysaccharide biosynthesis O-acetyl 80.05
>PRK13412 fkp bifunctional fucokinase/L-fucose-1-P-guanylyltransferase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=7.5e-157  Score=1436.72  Aligned_cols=919  Identities=25%  Similarity=0.375  Sum_probs=787.8

Q ss_pred             HHhccCCCCCCCCccEEEEccCCHHHHHHHHHHHHHHHHcCCCCCccEEEEeeCCCCCccCChhhHHHHHHHHHHHHhhh
Q 001402           32 LRLSVRHPSRVPTWDAIVLTAASPEQAELYEWQLRRAKRMGRIASSTVTLAVPDPDGQRIGSGAATLNAIFSLAMHYQKL  111 (1084)
Q Consensus        32 ~~~~~~~~~~~~~w~~~v~t~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dp~g~~iGsGg~Tl~~l~~~~~~~~~~  111 (1084)
                      .+.++... -.+.||.||+|+.+++|+..|+|                 ||++||+|.||||||||+|+|++|++++   
T Consensus        21 ~~~~~~~k-~~~~~~~~v~~~~~~~~~~~~~~-----------------~~~~Dp~G~riGsGG~T~~~l~~~~~~~---   79 (974)
T PRK13412         21 ARIANMKK-LLSLPPNLVDSFHSLEQVDRTEW-----------------FCTSDPVGQKLGSGGGTTWLLEACFRNG---   79 (974)
T ss_pred             HHHHHHhh-ccCCCcHHHHhhcCHhhccccce-----------------EEecCCCCCcccCChHHHHHHHHHHHHh---
Confidence            34555444 48999999999999999999988                 9999999999999999999999999998   


Q ss_pred             cccCCcccccCCCCCCCCccchhhhHHHHHhhhcccchhhhcCCCCCCcCCCCCCCceeeeccCCcCCCCCCChhH-HHH
Q 001402          112 CLDIGPEAIANGGNSGSFMKNEESLSAMVKFMAKKHILLVHAGGDSKRVPWANPMGKVFLPLPYLAADDPDGPVPL-LFD  190 (1084)
Q Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~iLllHaGg~S~R~P~~s~~GK~ft~lP~~~~~~~~g~~~~-l~e  190 (1084)
                          +               ++.+|   .+||.+.|+|||||||||||+|+|||+||+|+|||+++++ ++.++++ |++
T Consensus        80 ----~---------------~~~~~---~~~l~~~~~lllHaGG~S~RlP~~s~~GK~f~p~P~~~~~-~g~~l~~~~l~  136 (974)
T PRK13412         80 ----S---------------PGGDF---TEWLGKEKRILLHAGGQSRRLPGYAPSGKILTPVPVFRWE-RGQRLSQNLLS  136 (974)
T ss_pred             ----c---------------cccch---hhhhccccEEEEecCCccccCccccccccccccCCccccC-CCChhHHHHHH
Confidence                2               12233   6899999999999999999999999999999999998733 2334444 667


Q ss_pred             HHHHHhhhhhhhcCCCC--eEEEEcCCcccccCccccCcCCCcEEEEEEEcChhccccceEEEECCCCCccccccccccc
Q 001402          191 HILAISSCARQALKNEG--GIFTMTGDVLPCFDASTMILPEDASCIITVPITLDIASNHGVIVAAKDGILNENYALSLVD  268 (1084)
Q Consensus       191 ~~l~i~~~~~~~~~~p~--gVlV~sgD~I~~md~~~~~~~~a~vtv~a~pv~~~~As~hGV~~~d~~~~~~~~~~~~~v~  268 (1084)
                      ..+.+|.+++. + .|+  ||||+|||++.+||.+++++|++||+|+++++++++|++||||++|+++++       .|+
T Consensus       137 ~~l~~~~~~~~-~-~p~~~g~li~~gDv~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~HGVfv~~~~~~~-------~~~  207 (974)
T PRK13412        137 LQLPLYERIMS-K-APEGLHTLIASGDVYIRSEQPLQDIPEADVVCYGLWVDPSLATNHGVFVSSRKSPE-------RLD  207 (974)
T ss_pred             HHhHHHHHHHh-h-CcccCceEEEecchhhhccccccCCCccCeEEEEeccChhhccCceEEEeCCCChH-------HHH
Confidence            77777777654 2 344  999999999999999999999999999999999999999999999998542       589


Q ss_pred             eeEecCChhhhhcccccCCCCcceeeeeeEEecHHHHHHHHHHhcCCCCcccccccccccceeccccccccccCCcCccc
Q 001402          269 DLLQKPNVDELAKNHAILDDGRALLDTGIIAVRGKAWEELVMLSCSCPPMVSELLKSGKEMSLYEDLVAAWVPAKHDWLM  348 (1084)
Q Consensus       269 ~fleKPs~~~m~~~~av~~~~~~l~s~Giy~f~~~~~~~ll~~~~~~~d~g~d~i~~~~~~~~y~DF~~~~~~~~~~y~~  348 (1084)
                      +||||||.+||   +++++++.+++|+|+|+|+.++++.|+.....      +..+..+++|+|+||++++++       
T Consensus       208 ~~LqKps~eel---~a~~~~~~~l~D~g~~~~~~~a~~~L~~~~~~------~~~~~~~~~dlY~Df~~aLg~-------  271 (974)
T PRK13412        208 FMLQKPSLEEL---GGLSKTHLFLMDIGIWLLSDRAVELLMKRSGK------EDGGKLKYYDLYSDFGLALGT-------  271 (974)
T ss_pred             HHhcCCCHHHH---HhhhcCCeEEEeeeEEEEChHHHHHHHHhhhc------ccCCcceeeehHHHHHHhcCC-------
Confidence            99999999999   67999999999999999999999999975322      123557999999999999864       


Q ss_pred             cCCcc-hhHHhhhcCCCccccccCCcccccccCcchhcc------cccccccccccccceeeccCCCCceeeeccEEEec
Q 001402          349 LRPLG-KELVSKLGKQRMFSYCAYELLFLHFGTSSEVLD------HLSGDVSGLVGRRHLCSIPATTVSDIAASAVVLSS  421 (1084)
Q Consensus       349 ~~~~~-~~~~~aL~~~pi~~l~~p~a~F~h~gt~~e~l~------~l~~d~~~l~~~~~~~~~~~~~g~~i~~~~~V~~S  421 (1084)
                       +++. +..++   ..++..+++++++||||||++|+++      +++.+++.++++++ ++.|         .++|+||
T Consensus       272 -~~~~~~~el~---~l~~~i~~L~~~~F~H~GTs~E~l~~~~~~q~~~~~~~~i~~~~~-~~~~---------~~~v~ns  337 (974)
T PRK13412        272 -HPRIGDDELN---ALSVAILPLPGGEFYHYGTSRELISSTLAVQNLVTDQRRIMHRKV-KPHP---------AMFVQNA  337 (974)
T ss_pred             -CCCcchhhhc---ccceEEEEcCCceeEEecCcHHHhcCchhHHHHhhhhhhhhcccc-CCCC---------ceEEEee
Confidence             2221 23333   2334466899999999999999998      67777877776652 3333         2589999


Q ss_pred             cccCCceeCCCc-EEEEcEECCCcEECCCCeEeccccCCCCCCCCCCCcceEeCCCcEeeeeecCCcceEEEEEeccCCC
Q 001402          422 KIAHGVSIGEDS-LIYDSNISSGIQIGSLSIVVGTNFPEEAGSTAEDSFRFMLPDRHCLWEVPLVGCTERVLVYCGLHDN  500 (1084)
Q Consensus       422 vL~~~v~V~~~s-~Ve~S~l~~~v~IG~~~iIsg~~i~~~~~~~~~~~~~~~iP~g~~i~~v~l~~~~~~v~~~~G~~D~  500 (1084)
                      +|++++++++++ |||+|+|+++|+||++|||+||+         +|+|+++||+|+|++.||+ ++..||+|+||++||
T Consensus       338 ~~~~~~s~~~~s~~vE~s~l~~~~~ig~~~Iisgv~---------~~~~~~~vP~~~ci~~vpl-~~~~~v~r~ygi~D~  407 (974)
T PRK13412        338 VLSGKLTAENATLWIENSHVGEGWKLASRSIITGVP---------ENSWNLDLPEGVCIDVVPV-GDRGFVARPYGLDDV  407 (974)
T ss_pred             EecCCcccCCCeEEEEeeEecCCeEEcCCcEEeccc---------ccccceecCCCcEEEEEEc-CCCcEEEEEecCCcc
Confidence            999999999985 59999999999999999999997         3779999999999999999 788999999999999


Q ss_pred             CCCCCCCCC-cccCCChHHHHHHhCCCCcccccCCCCCccccccccccccccchhhHH-HHHHHhcCCCCCcCccccccc
Q 001402          501 PKNSLTKDG-TFCGKPWQKVWHDLGIQESDLWSSTGSQEKCLWNAKIFPILSYSEMLT-LATWLMGLSDHKTGFLLPLWK  578 (1084)
Q Consensus       501 ~k~~~~~~~-t~~g~~~~~~l~~~gi~~~dlw~~~~~~~~~Lw~A~LFPV~~~~e~l~-~~~wm~~~~~~~~~~~~~~W~  578 (1084)
                      ||++++++. +|||+||.+||+.+||+++|+|++    .+|||||+|||||++.|++. +++||++.....+  ..++|+
T Consensus       408 ~K~s~~~~~~~~~G~~~~~~l~~~gl~~~~l~~~----~~~Lw~A~LFPv~~~~e~~~~~~~~m~~~~~~~~--~~~lw~  481 (974)
T PRK13412        408 FKGALADGKTTWFGRPFLEWMEARGLSWPDLKGR----TDDLQAAHLFPVVTSVEELGAVLRWMLSEPSLEE--GKEIWL  481 (974)
T ss_pred             cccccccccCeecCccHHHHHHHcCCCHHHhcCC----ccchhccccccccCcHHHHHHHHHHHhhcccccc--chhhhc
Confidence            999998554 699999999999999999999953    38999999999999999976 8999987554333  457899


Q ss_pred             ccccccHHHHhccCChHHHhhhcchhhhhhHHHHHHHHHhhhhhhhhhhHHHHHHhccccchhhHHHHhhhhcCcccCCC
Q 001402          579 NSRRVSLEELHRSIDFSEMCTGSSNHQADLAAGIAKACINYGMLGRNLSQLCEEILQKELSGVDICKDILDLCPRLQDQN  658 (1084)
Q Consensus       579 ~~~rlS~~Ei~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  658 (1084)
                      +++|+|++|+++++|+++||++|+          .+++.||+.+++|+++++||||++.+++.++++..|..++.+..++
T Consensus       482 ~~~r~S~~e~~~~~d~~~l~~~r~----------~~~~~~~~~l~~n~~~~~~~ql~~~~~~~~~~~~~l~~~~~l~~~~  551 (974)
T PRK13412        482 RSEKLSADEISAYANLARLYAQRE----------AFRKANWRALAANHEKSVFYQLDLADAAEDFVRLLLDMPEILPEDA  551 (974)
T ss_pred             ccceecHHHHhhccCHHHHHHHHH----------HHHHhhHHHHHHhhhhhhhhhhhHHHHHHHHHHhcCCCcccchhhc
Confidence            999999999999999999999887          6666799999999999999999999999999999999988888888


Q ss_pred             CCCcc-hhhhHHHHHHHHHhcCchhhhhHHHHHHHHHhHHHHHHHHhhccccccccccccccccccccCCCCCCCCCCCC
Q 001402          659 SKILP-KSRAYQAQVDLLRACKEETTASELEHKVWAAVADETASAIKYGFREYLLEPLSRGSSAYQNKNDDGFVDHPFQP  737 (1084)
Q Consensus       659 ~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~~~~~~~~a~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  737 (1084)
                      |...+ .+|||++++..+  +|+.  ....|+++|..+++++..+.        ..+++.       |..++|.||.   
T Consensus       552 ~~~~~~~~~~~~~~~~~~--~~~~--~~~~~~~~f~~~~~~~~~~~--------~~~~~~-------~~~~v~~~~~---  609 (974)
T PRK13412        552 PLMLRIHNRMFRARILKL--SGAR--YREEEQAAFRLLRDGLLDGA--------YPRKQT-------PKLEVYSDQI---  609 (974)
T ss_pred             ccccchhHHHHHHHHHHh--hccc--cchHHHHHHHHHHHHhhhcc--------cccccC-------CCcccccCcE---
Confidence            88888 889999986555  5643  34779999998888876544        233333       6788888886   


Q ss_pred             CeEEEEeceEEeeeccccccCCcccCCCceEEEEeeecCcccceeEEEEEcCCCcEEEEeCCCC-ceeeecCCCCCCCCC
Q 001402          738 RTVKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGN-QLHIEDLTPIATPFD  816 (1084)
Q Consensus       738 ~~v~v~aP~Ri~L~Ge~tD~~py~~~~GG~Vl~~AI~l~~~~pi~v~v~~~~~~~i~i~s~~~~-~~~~~~l~~l~~p~~  816 (1084)
                        +++++|+||||+|||||+|||++.+||.|+|+||++++++||.++++++++..|++.+.+.. .+.+.+.+++.++..
T Consensus       610 --~~~~aPgRVnLiGghTDtPpy~~ynGG~VLn~AId~~g~~pi~v~v~~~~d~~irl~S~d~~~~~~v~~~~~l~~~~~  687 (974)
T PRK13412        610 --VWGRSPVRIDLAGGWTDTPPYCLYSGGNVVNLAIELNGQPPLQVYVKPCSEPHIVLRSIDLGAMEVVRTNEELRDYKK  687 (974)
T ss_pred             --EEEeCceEEeecccCcCCCcccCcCCcEEEEEEEeCCCCccEEEEEEECCCCeEEEEECCCCCceEEecchhhccccc
Confidence              88999999999999999999999999999999999999999999999998888988875543 333455566666666


Q ss_pred             CCChHHHHHHHHHHhhhhhh-----------hcc-cccCEEEEEEecCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHH
Q 001402          817 HNDPFRLVKSALLVTGVIHE-----------KLI-ESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNEN  884 (1084)
Q Consensus       817 ~~~~~~lvkaal~~~g~~~~-----------~~~-~~~G~~I~i~S~IP~GsGLGSSSAlavA~l~Al~~l~g~~ls~~e  884 (1084)
                      +++|++|+|+|+...|++++           ... ...|++|++.|+||.|+|||||||+++|++.|++++++.++++++
T Consensus       688 ~~~~~~~~K~al~~~G~~~~~~~~~~~~l~e~l~~~G~G~~I~i~s~IP~GsGLGSSAAlavA~l~AL~~~~g~~ls~~e  767 (974)
T PRK13412        688 VGSPFSIPKAALCLAGFAPRFSAESYASLEEQLKAFGSGIEITLLAAIPAGSGLGTSSILAATVLGAISDFCGLAWDKNE  767 (974)
T ss_pred             ccchHhhhhhhheecccccccccchhHHHHHHHHhcCCCeEEEEecCCCCCCCccHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence            77899999999987665441           111 126899999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCcccchhhhcccceEEEecCCCccceeEEEEccCChhhhhccCcEEEEEEcCCcchHHHHHHHHH
Q 001402          885 VARLVLLLEQLMGTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVV  964 (1084)
Q Consensus       885 La~la~~~E~~~gt~~G~~Dq~a~~~GG~~~~~~~~g~~~~~~v~pl~~~~~~~~~l~~~lvlv~tg~tr~T~~iL~~v~  964 (1084)
                      |+++|..+|+.+++++|||||+++++||+++++..++......+++++.+.+...+++.+++|+|||++|.|++++++|+
T Consensus       768 la~~A~~~E~~lhg~~g~qDq~~a~~GG~~~i~~~~~~~~~~~v~~L~~~~~~~~eLe~~LlL~yTGitR~T~~iV~~Vv  847 (974)
T PRK13412        768 ICNRTLVLEQLLTTGGGWQDQYGGVLPGVKLLQTGAGFAQSPLVRWLPDSLFTQPEYRDCHLLYYTGITRTAKGILAEIV  847 (974)
T ss_pred             HHHHHHHHHHHHCCCCchhhhhhHhcCCeEEEEecCCcccCcceeecCcchhhhhhccCcEEEEECCCeeeHHHHHHHHH
Confidence            99999999999999999999999999999998866543333456777766555566788999999999999999999998


Q ss_pred             HHHhhcChHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHcCCCCeEEEcCCCc
Q 001402          965 TRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGG 1044 (1084)
Q Consensus       965 ~~~~~~~~~~~~~l~~l~~~a~~~~~AL~~gD~~~lg~lm~~s~~~~~~l~~~vs~p~ld~li~~a~~ga~GaklSGAGg 1044 (1084)
                      +.+..+++.....+++|++++.++.+||++||++.||++|+++|++++.|.+++++|.+++|++.++++++|+|+||||+
T Consensus       848 ~~~~~~~~~~~~~l~~ig~La~ea~~ALe~gD~~~LG~LMn~~w~ll~~L~~GVSnp~LD~Li~~A~~gAlGaKLTGAGG  927 (974)
T PRK13412        848 RSMFLNSTAHLQLLHEMKAHALDMYEAIQRGEFEEFGRLVGKTWEQNKALDSGTNPAAVEAIIELIKDYTLGYKLPGAGG  927 (974)
T ss_pred             HHHHhCcHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHcCCcEEEecccCc
Confidence            88877766666788999999999999999999999999999999999999888999999999999988999999999999


Q ss_pred             cceeEEEEcChhhHHHHHHHHHhcCCCCcEEE-EeecCCC
Q 001402         1045 GGFALLLAKDAESATELRRMLEKDSNFNSEVY-NWNIYLE 1083 (1084)
Q Consensus      1045 GG~viaL~~~~~~ae~i~~~L~~~~~f~v~v~-~~~i~~~ 1083 (1084)
                      |||+++++++++.+++++++|++.......+| +++++.+
T Consensus       928 GGcvI~Lak~~~~a~~I~~~L~~~~~~~~~~~~~~~l~~~  967 (974)
T PRK13412        928 GGYLYMVAKDPGAAERIRKILTENAPNPRARFVDMSLSDK  967 (974)
T ss_pred             ccEEEEEECChhhHHHHHHHHHhcccCCceeEEEEEECCC
Confidence            99999999888899999999998766666555 7777654

>KOG4644 consensus L-fucose kinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07959 Fucokinase: L-fucokinase; InterPro: IPR012887 In the salvage pathway of GDP-L-fucose, free cytosolic fucose is phosphorylated by L-fucokinase to form L-fucose-L-phosphate, which is then further converted to GDP-L-fucose in the reaction catalysed by GDP-L-fucose pyrophosphorylase [] Back     alignment and domain information
>COG2605 Predicted kinase related to galactokinase and mevalonate kinase [General function prediction only] Back     alignment and domain information
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>COG0153 GalK Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK05101 galactokinase; Provisional Back     alignment and domain information
>PRK00555 galactokinase; Provisional Back     alignment and domain information
>PRK05322 galactokinase; Provisional Back     alignment and domain information
>PLN02865 galactokinase Back     alignment and domain information
>PTZ00290 galactokinase; Provisional Back     alignment and domain information
>TIGR00131 gal_kin galactokinase Back     alignment and domain information
>TIGR01220 Pmev_kin_Gr_pos phosphomevalonate kinase, ERG8-type, Gram-positive branch Back     alignment and domain information
>PLN02521 galactokinase Back     alignment and domain information
>TIGR00549 mevalon_kin mevalonate kinase Back     alignment and domain information
>PLN02677 mevalonate kinase Back     alignment and domain information
>PRK03817 galactokinase; Provisional Back     alignment and domain information
>COG1577 ERG12 Mevalonate kinase [Lipid metabolism] Back     alignment and domain information
>PRK03926 mevalonate kinase; Provisional Back     alignment and domain information
>PTZ00298 mevalonate kinase; Provisional Back     alignment and domain information
>KOG1511 consensus Mevalonate kinase MVK/ERG12 [Lipid transport and metabolism] Back     alignment and domain information
>PRK00128 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PLN02451 homoserine kinase Back     alignment and domain information
>COG0083 ThrB Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG0631 consensus Galactokinase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PRK02534 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK01212 homoserine kinase; Provisional Back     alignment and domain information
>TIGR00154 ispE 4-diphosphocytidyl-2C-methyl-D-erythritol kinase Back     alignment and domain information
>PTZ00299 homoserine kinase; Provisional Back     alignment and domain information
>TIGR00191 thrB homoserine kinase Back     alignment and domain information
>TIGR01219 Pmev_kin_ERG8 phosphomevalonate kinase, ERG8-type, eukaryotic branch Back     alignment and domain information
>PRK03188 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK01123 shikimate kinase; Provisional Back     alignment and domain information
>PRK14614 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14615 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14616 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14608 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR01920 Shik_kin_archae shikimate kinase Back     alignment and domain information
>PRK14611 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14612 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK14613 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>KOG1322 consensus GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase [Cell wall/membrane/envelope biogenesis] Back     alignment and domain information
>PRK00343 ipk 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR00144 beta_RFAP_syn beta-RFAP synthase Back     alignment and domain information
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK14609 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>COG1947 IspE 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase [Lipid metabolism] Back     alignment and domain information
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK14610 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK00650 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PLN02241 glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>PRK05905 hypothetical protein; Provisional Back     alignment and domain information
>COG1685 Archaeal shikimate kinase [Amino acid transport and metabolism / Coenzyme metabolism] Back     alignment and domain information
>PRK04181 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Provisional Back     alignment and domain information
>TIGR01240 mevDPdecarb diphosphomevalonate decarboxylase Back     alignment and domain information
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit Back     alignment and domain information
>COG1907 Predicted archaeal sugar kinases [General function prediction only] Back     alignment and domain information
>PF00288 GHMP_kinases_N: GHMP kinases N terminal domain; InterPro: IPR006204 The galacto- (2 Back     alignment and domain information
>COG3890 ERG8 Phosphomevalonate kinase [Lipid metabolism] Back     alignment and domain information
>COG4542 PduX Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form Back     alignment and domain information
>COG1829 Predicted archaeal kinase (sugar kinase superfamily) [General function prediction only] Back     alignment and domain information
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PF08544 GHMP_kinases_C: GHMP kinases C terminal ; InterPro: IPR013750 This domain is found in homoserine kinases (2 Back     alignment and domain information
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PLN02407 diphosphomevalonate decarboxylase Back     alignment and domain information
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>COG3407 MVD1 Mevalonate pyrophosphate decarboxylase [Lipid metabolism] Back     alignment and domain information
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase Back     alignment and domain information
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PF10509 GalKase_gal_bdg: Galactokinase galactose-binding signature; InterPro: IPR019539 This entry represents a highly conserved galactokinase signature sequence which appears to be present in all galactokinases, irrespective of how many other ATP binding sites, etc that they carry [] Back     alignment and domain information
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>KOG4519 consensus Phosphomevalonate kinase [Lipid transport and metabolism] Back     alignment and domain information
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd06428 M1P_guanylylT_A_like_N N-terminal domain of M1P_guanylyl_A_ like proteins are likely to be a isoform of GDP-mannose pyrophosphorylase Back     alignment and domain information
>KOG1537 consensus Homoserine kinase [Amino acid transport and metabolism] Back     alignment and domain information
>KOG2833 consensus Mevalonate pyrophosphate decarboxylase [Lipid transport and metabolism] Back     alignment and domain information
>PF00483 NTP_transferase: Nucleotidyl transferase This Prosite entry is only a sub-family of the Pfam entry Back     alignment and domain information
>KOG1462 consensus Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>KOG1461 consensus Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd06425 M1P_guanylylT_B_like_N N-terminal domain of the M1P-guanylyltransferase B-isoform like proteins Back     alignment and domain information
>cd04652 LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon) Back     alignment and domain information
>cd04651 LbH_G1P_AT_C Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase Back     alignment and domain information
>TIGR01099 galU UTP-glucose-1-phosphate uridylyltransferase Back     alignment and domain information
>cd04181 NTP_transferase NTP_transferases catalyze the transfer of nucleotides onto phosphosugars Back     alignment and domain information
>TIGR02623 G1P_cyt_trans glucose-1-phosphate cytidylyltransferase Back     alignment and domain information
>KOG1461 consensus Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd03356 LbH_G1P_AT_C_like Left-handed parallel beta-Helix (LbH) domain of a group of proteins with similarity to glucose-1-phosphate adenylyltransferase: Included in this family are glucose-1-phosphate adenylyltransferase, mannose-1-phosphate guanylyltransferase, and the eukaryotic translation initiation factor eIF-2B subunits, epsilon and gamma Back     alignment and domain information
>PRK15480 glucose-1-phosphate thymidylyltransferase RfbA; Provisional Back     alignment and domain information
>COG0448 GlgC ADP-glucose pyrophosphorylase [Carbohydrate transport and metabolism] Back     alignment and domain information
>cd04652 LbH_eIF2B_gamma_C eIF-2B gamma subunit, C-terminal Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon) Back     alignment and domain information
>TIGR01207 rmlA glucose-1-phosphate thymidylyltransferase, short form Back     alignment and domain information
>cd03356 LbH_G1P_AT_C_like Left-handed parallel beta-Helix (LbH) domain of a group of proteins with similarity to glucose-1-phosphate adenylyltransferase: Included in this family are glucose-1-phosphate adenylyltransferase, mannose-1-phosphate guanylyltransferase, and the eukaryotic translation initiation factor eIF-2B subunits, epsilon and gamma Back     alignment and domain information
>cd02541 UGPase_prokaryotic Prokaryotic UGPase catalyses the synthesis of UDP-glucose Back     alignment and domain information
>cd02509 GDP-M1P_Guanylyltransferase GDP-M1P_Guanylyltransferase catalyzes the formation of GDP-Mannose Back     alignment and domain information
>cd05787 LbH_eIF2B_epsilon eIF-2B epsilon subunit, central Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon) Back     alignment and domain information
>cd02538 G1P_TT_short G1P_TT_short is the short form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>PRK13389 UTP--glucose-1-phosphate uridylyltransferase subunit GalU; Provisional Back     alignment and domain information
>cd04651 LbH_G1P_AT_C Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase Back     alignment and domain information
>cd02524 G1P_cytidylyltransferase G1P_cytidylyltransferase catalyzes the production of CDP-D-Glucose Back     alignment and domain information
>cd05824 LbH_M1P_guanylylT_C Mannose-1-phosphate guanylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Mannose-1-phosphate guanylyltransferase is also known as GDP-mannose pyrophosphorylase Back     alignment and domain information
>KOG1462 consensus Translation initiation factor 2B, gamma subunit (eIF-2Bgamma/GCD1) [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>cd06915 NTP_transferase_WcbM_like WcbM_like is a subfamily of nucleotidyl transferases Back     alignment and domain information
>cd04197 eIF-2B_epsilon_N The N-terminal domain of epsilon subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>TIGR01105 galF UTP-glucose-1-phosphate uridylyltransferase, non-catalytic GalF subunit Back     alignment and domain information
>cd06422 NTP_transferase_like_1 NTP_transferase_like_1 is a member of the nucleotidyl transferase family Back     alignment and domain information
>PRK02862 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK10122 GalU regulator GalF; Provisional Back     alignment and domain information
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>cd05787 LbH_eIF2B_epsilon eIF-2B epsilon subunit, central Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon) Back     alignment and domain information
>TIGR02092 glgD glucose-1-phosphate adenylyltransferase, GlgD subunit Back     alignment and domain information
>cd04189 G1P_TT_long G1P_TT_long represents the long form of glucose-1-phosphate thymidylyltransferase Back     alignment and domain information
>PRK05293 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>PRK00844 glgC glucose-1-phosphate adenylyltransferase; Provisional Back     alignment and domain information
>cd05824 LbH_M1P_guanylylT_C Mannose-1-phosphate guanylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Mannose-1-phosphate guanylyltransferase is also known as GDP-mannose pyrophosphorylase Back     alignment and domain information
>cd04183 GT2_BcE_like GT2_BcbE_like is likely involved in the biosynthesis of the polysaccharide capsule Back     alignment and domain information
>cd06426 NTP_transferase_like_2 NTP_trnasferase_like_2 is a member of the nucleotidyl transferase family Back     alignment and domain information
>TIGR01479 GMP_PMI mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase Back     alignment and domain information
>cd02540 GT2_GlmU_N_bac N-terminal domain of bacterial GlmU Back     alignment and domain information
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains Back     alignment and domain information
>TIGR01208 rmlA_long glucose-1-phosphate thymidylylransferase, long form Back     alignment and domain information
>cd02523 PC_cytidylyltransferase Phosphocholine cytidylyltransferases catalyze the synthesis of CDP-choline Back     alignment and domain information
>TIGR03308 phn_thr-fam phosphonate metabolim protein, transferase hexapeptide repeat family Back     alignment and domain information
>TIGR02091 glgC glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>cd02507 eIF-2B_gamma_N_like The N-terminal of eIF-2B_gamma_like is predicted to have glycosyltransferase activity Back     alignment and domain information
>cd04745 LbH_paaY_like paaY-like: This group is composed by uncharacterized proteins with similarity to the protein product of the E Back     alignment and domain information
>PLN02472 uncharacterized protein Back     alignment and domain information
>cd04745 LbH_paaY_like paaY-like: This group is composed by uncharacterized proteins with similarity to the protein product of the E Back     alignment and domain information
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains Back     alignment and domain information
>cd04645 LbH_gamma_CA_like Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E Back     alignment and domain information
>PLN02241 glucose-1-phosphate adenylyltransferase Back     alignment and domain information
>TIGR02287 PaaY phenylacetic acid degradation protein PaaY Back     alignment and domain information
>PLN02296 carbonate dehydratase Back     alignment and domain information
>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X) Back     alignment and domain information
>TIGR02287 PaaY phenylacetic acid degradation protein PaaY Back     alignment and domain information
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase Back     alignment and domain information
>cd00710 LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>PLN02296 carbonate dehydratase Back     alignment and domain information
>cd04650 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition Back     alignment and domain information
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd04645 LbH_gamma_CA_like Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E Back     alignment and domain information
>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information
>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase Back     alignment and domain information
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK05450 3-deoxy-manno-octulosonate cytidylyltransferase; Provisional Back     alignment and domain information
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain Back     alignment and domain information
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd04650 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition Back     alignment and domain information
>PRK13627 carnitine operon protein CaiE; Provisional Back     alignment and domain information
>PRK13627 carnitine operon protein CaiE; Provisional Back     alignment and domain information
>TIGR03308 phn_thr-fam phosphonate metabolim protein, transferase hexapeptide repeat family Back     alignment and domain information
>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X) Back     alignment and domain information
>cd03359 LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport Back     alignment and domain information
>COG1210 GalU UDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>cd03358 LbH_WxcM_N_like WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain Back     alignment and domain information
>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X) Back     alignment and domain information
>cd04646 LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport Back     alignment and domain information
>PLN02472 uncharacterized protein Back     alignment and domain information
>PF00132 Hexapep: Bacterial transferase hexapeptide (six repeats); InterPro: IPR001451 A variety of bacterial transferases contain a repeat structure composed of tandem repeats of a [LIV]-G-X(4) hexapeptide, which, in the tertiary structure of LpxA (UDP N-acetylglucosamine acyltransferase) [], has been shown to form a left-handed parallel beta helix Back     alignment and domain information
>cd02517 CMP-KDO-Synthetase CMP-KDO synthetase catalyzes the activation of KDO which is an essential component of the lipopolysaccharide Back     alignment and domain information
>TIGR00965 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Back     alignment and domain information
>cd03357 LbH_MAT_GAT Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates Back     alignment and domain information
>TIGR00965 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Back     alignment and domain information
>TIGR03532 DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase Back     alignment and domain information
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd03358 LbH_WxcM_N_like WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain Back     alignment and domain information
>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain Back     alignment and domain information
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>cd03359 LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport Back     alignment and domain information
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>COG0836 {ManC} Mannose-1-phosphate guanylyltransferase [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK11830 dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional Back     alignment and domain information
>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X) Back     alignment and domain information
>PRK10092 maltose O-acetyltransferase; Provisional Back     alignment and domain information
>cd04647 LbH_MAT_like Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins Back     alignment and domain information
>cd04646 LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport Back     alignment and domain information
>cd00710 LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site Back     alignment and domain information
>cd03352 LbH_LpxD UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc Back     alignment and domain information
>cd03350 LbH_THP_succinylT 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (also called THP succinyltransferase): THDP N-succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA Back     alignment and domain information
>TIGR03570 NeuD_NnaD sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family Back     alignment and domain information
>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Back     alignment and domain information
>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase Back     alignment and domain information
>COG0663 PaaY Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only] Back     alignment and domain information
>cd02508 ADP_Glucose_PP ADP-glucose pyrophosphorylase is involved in the biosynthesis of glycogen or starch Back     alignment and domain information
>TIGR03570 NeuD_NnaD sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family Back     alignment and domain information
>cd04647 LbH_MAT_like Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins Back     alignment and domain information
>PLN02694 serine O-acetyltransferase Back     alignment and domain information
>PF14602 Hexapep_2: Hexapeptide repeat of succinyl-transferase; PDB: 2P2O_B 2IC7_B 2RIJ_A 3FSY_B 3FSX_D 3CJ8_A 1QRE_A 1QRG_A 1THJ_B 1QRM_A Back     alignment and domain information
>cd04649 LbH_THP_succinylT_putative Putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (THP succinyltransferase), C-terminal left-handed parallel alpha-helix (LbH) domain: This group is composed of mostly uncharacterized proteins containing an N-terminal domain of unknown function and a C-terminal LbH domain with similarity to THP succinyltransferase LbH Back     alignment and domain information
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional Back     alignment and domain information
>PLN02694 serine O-acetyltransferase Back     alignment and domain information
>TIGR03532 DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase Back     alignment and domain information
>PRK05289 UDP-N-acetylglucosamine acyltransferase; Provisional Back     alignment and domain information
>TIGR03536 DapD_gpp 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase Back     alignment and domain information
>TIGR01172 cysE serine O-acetyltransferase Back     alignment and domain information
>TIGR01172 cysE serine O-acetyltransferase Back     alignment and domain information
>PLN02357 serine acetyltransferase Back     alignment and domain information
>KOG1460 consensus GDP-mannose pyrophosphorylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG1044 LpxD UDP-3-O-[3-hydroxymyristoyl] Back     alignment and domain information
>PLN02739 serine acetyltransferase Back     alignment and domain information
>PRK15460 cpsB mannose-1-phosphate guanyltransferase; Provisional Back     alignment and domain information
>PRK11132 cysE serine acetyltransferase; Provisional Back     alignment and domain information
>PRK00892 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional Back     alignment and domain information
>COG0663 PaaY Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only] Back     alignment and domain information
>PRK11830 dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional Back     alignment and domain information
>cd04649 LbH_THP_succinylT_putative Putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (THP succinyltransferase), C-terminal left-handed parallel alpha-helix (LbH) domain: This group is composed of mostly uncharacterized proteins containing an N-terminal domain of unknown function and a C-terminal LbH domain with similarity to THP succinyltransferase LbH Back     alignment and domain information
>PRK09527 lacA galactoside O-acetyltransferase; Reviewed Back     alignment and domain information
>PRK05289 UDP-N-acetylglucosamine acyltransferase; Provisional Back     alignment and domain information
>PRK00892 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional Back     alignment and domain information
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane] Back     alignment and domain information
>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional Back     alignment and domain information
>cd03351 LbH_UDP-GlcNAc_AT UDP-N-acetylglucosamine O-acyltransferase (UDP-GlcNAc acyltransferase): Proteins in this family catalyze the transfer of (R)-3-hydroxymyristic acid from its acyl carrier protein thioester to UDP-GlcNAc Back     alignment and domain information
>TIGR01852 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase Back     alignment and domain information
>cd04198 eIF-2B_gamma_N The N-terminal domain of gamma subunit of the eIF-2B is a subfamily of glycosyltransferase 2 Back     alignment and domain information
>PLN02357 serine acetyltransferase Back     alignment and domain information
>PRK09677 putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1084
3k85_A357 Crystal Structure Of A D-Glycero-D-Manno-Heptose 1- 2e-11
>pdb|3K85|A Chain A, Crystal Structure Of A D-Glycero-D-Manno-Heptose 1-Phosphate Kinase From Bacteriodes Thetaiotaomicron Length = 357 Back     alignment and structure 
Iteration: 1

 Score = 68.6 bits (166), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/296 (22%), Positives = 123/296 (41%), Gaps = 20/296 (6%)
Query: 740  VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDA 799
            V+ + P+R+  AGG SD  P+S    G +LN  I+L +     TI ET      + + DA
Sbjct: 4    VRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAYC---TIEETNSGRIEINAYDA 60
Query: 800  GNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGV----IHEKLIESMGLQIRTWANVPRG 855
                           +       +   A L+ GV    I +  +E    +I T+ + P G
Sbjct: 61   ----------QCCKSYLSXSQLEIDGEASLIKGVYNRIIRDYRLEPKSFKITTYNDAPAG 110
Query: 856  SGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQL-MXXXXXXXXXXXXLYPGIK 914
            SGLGTSS     ++KA ++       +   +RL   +E+  +             + G  
Sbjct: 111  SGLGTSSTXVVCILKAFIEWLSLPLGDYETSRLAYEIERKDLGLSGGKQDQYAAAFGGFN 170
Query: 915  FTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLL 974
            +   F    L + V PL     ++ EL+   ++ FTG+ R +  ++ +      + +   
Sbjct: 171  YX-EFLQNDLVI-VNPLKXKRWIVDELESSXVLYFTGRSRSSAAIINEQKKNTSEGNQTA 228
Query: 975  ISSIKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFA 1030
            I +  ++ + A + + AL+  DV E  +I+ E W   ++     +N  +   F  A
Sbjct: 229  IEAXHKIKQSAIDTKLALLKGDVGEFARILGEGWENKKKXAGAITNPXIQEAFDVA 284

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1084
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 3e-66
3k17_A365 LIN0012 protein; protein structure initiative II(P 2e-31
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 1e-30
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 2e-29
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 6e-23
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 1e-22
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 5e-22
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 1e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-09
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-04
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 8e-09
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 9e-07
1pie_A419 Galactokinase; galactose, galactosemia, transferas 1e-06
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 2e-05
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Length = 357 Back     alignment and structure
 Score =  226 bits (578), Expect = 3e-66
 Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 17/343 (4%)

Query: 740  VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDA 799
            V+ + P+R+  AGG SD  P+S    G +LN  I+L +     TI ET      + + DA
Sbjct: 4    VRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAYC---TIEETNSGRIEINAYDA 60

Query: 800  GNQLHIEDLTPIATPFDHNDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLG 859
                    ++ +    + +    L+K       +I +  +E    +I T+ + P GSGLG
Sbjct: 61   QCCKSYLSMSQL----EIDGEASLIKGVYNR--IIRDYRLEPKSFKITTYNDAPAGSGLG 114

Query: 860  TSSILAAAVVKALLQITDGDQSNENVARLVLLLEQ-LMGTGGGWQDQIGGLYPGIKFTSS 918
            TSS +   ++KA ++       +   +RL   +E+  +G  GG QDQ    + G  +   
Sbjct: 115  TSSTMVVCILKAFIEWLSLPLGDYETSRLAYEIERKDLGLSGGKQDQYAAAFGGFNYMEF 174

Query: 919  FPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSI 978
                   + V PL     ++ EL+  +++ FTG+ R +  ++ +      + +   I ++
Sbjct: 175  LQN--DLVIVNPLKMKRWIVDELESSMVLYFTGRSRSSAAIINEQKKNTSEGNQTAIEAM 232

Query: 979  KRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFA-DPYCCGY 1037
             ++ + A + + AL+  DV E  +I+ E W   +++    +N  +   F  A        
Sbjct: 233  HKIKQSAIDTKLALLKGDVGEFARILGEGWENKKKMAGAITNPMIQEAFDVATGAGAMAG 292

Query: 1038 KLVGAGGGGFALLLAKDAESATELRRMLEKDSNFNSEVYNWNI 1080
            K+ GAGGGGF + + +      E+ R L      N  V  +  
Sbjct: 293  KVSGAGGGGFIMFVVEP-TRKEEVVRALNN---LNGFVMPFQF 331
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Length = 365 Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Length = 308 Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Length = 332 Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Length = 292 Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Length = 317 Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Length = 395 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Length = 399 Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Length = 350 Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Length = 419 Back     alignment and structure
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Length = 478 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1084
3k85_A357 D-glycero-D-manno-heptose 1-phosphate kinase; bact 100.0
3k17_A365 LIN0012 protein; protein structure initiative II(P 100.0
2pg9_A337 Phosphomevalonate kinase; GHMP kinase superfamily, 100.0
4hac_A321 Mevalonate kinase; GHMP, ATP binding, phosphorylat 100.0
3v2u_C520 Protein GAL3; rossmann fold, GHMP superfamily, tra 100.0
3gon_A335 Phosphomevalonate kinase; GHMP kinase superfamily, 100.0
2a2c_A478 N-acetylgalactosamine kinase; galactokinase, , tra 100.0
1pie_A419 Galactokinase; galactose, galactosemia, transferas 100.0
1wuu_A399 Galactokinase; galactosemia, GHMP superfamily, tra 100.0
1kvk_A395 MK, mevalonate kinase; RMK, ATP, GHMP, transferase 100.0
2hfs_A332 Mevalonate kinase, putative; GHMP kinase, trypanos 100.0
2cz9_A350 Probable galactokinase; structural genomics, NPPSF 100.0
2x7i_A308 Mevalonate kinase; transferase; HET: CIT; 2.20A {S 100.0
1kkh_A317 Mevalonate kinase; mixed beta sheet, phosphate-bin 100.0
2oi2_A292 Mevalonate kinase; enzyme-inhibitor complex, trans 100.0
1h72_C296 HK, homoserine kinase; transferase, threonine bios 99.95
3hul_A298 HSK, HK, homoserine kinase; structural genomics, p 99.93
3pyf_A306 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.93
3qt5_A332 Mevalonate diphosphate decarboxylase; GHMP kinase 99.9
2gs8_A317 Mevalonate pyrophosphate decarboxylase; streptococ 99.9
2v8p_A271 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; 99.89
2ww4_A283 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; 99.88
1uek_A275 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 99.87
1fi4_A416 Mevalonate 5-diphosphate decarboxylase; mixed alph 99.83
2hke_A380 Diphosphomevalonate decarboxylase, putative; meval 99.74
3lto_A323 Mevalonate diphosphate decarboxylase; protein stru 99.68
3brk_X420 Glucose-1-phosphate adenylyltransferase; ADP-gluco 99.61
3f0n_A414 Mevalonate pyrophosphate decarboxylase; cholestero 99.57
1yp2_A451 Glucose-1-phosphate adenylyltransferase small subu 99.52
1hm9_A468 GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr 98.91
3st8_A501 Bifunctional protein GLMU; acetyltransferase, pyro 98.81
2iu8_A374 LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a 98.69
4fce_A459 Bifunctional protein GLMU; GLMU. csgid, niaid, str 98.65
2v0h_A456 Bifunctional protein GLMU; cell WALL, magnesium, c 98.61
2ggo_A401 401AA long hypothetical glucose-1-phosphate thymid 98.61
3c8v_A496 Putative acetyltransferase; YP_390128.1, structura 98.05
3juk_A281 UDP-glucose pyrophosphorylase (GALU); transfer; HE 97.39
4ecm_A269 Glucose-1-phosphate thymidylyltransferase; HET: DA 97.11
2qh5_A308 PMI, ALGA, mannose-6-phosphate isomerase; structur 96.99
3pnn_A303 Conserved domain protein; structural genomics, PSI 96.98
2pa4_A323 UTP-glucose-1-phosphate uridylyltransferase; phosp 96.92
2x65_A336 Mannose-1-phosphate guanylyltransferase; nucleotid 96.57
4evw_A255 Nucleoside-diphosphate-sugar pyrophosphorylase; st 96.53
3kwd_A213 Carbon dioxide concentrating mechanism protein; LE 96.36
2e3d_A302 UTP--glucose-1-phosphate uridylyltransferase; UDP- 96.33
1fxo_A293 Glucose-1-phosphate thymidylyltransferase; rhamnos 96.32
1lvw_A295 Glucose-1-phosphate thymidylyltransferase; protein 96.16
3brk_X420 Glucose-1-phosphate adenylyltransferase; ADP-gluco 96.06
3r8y_A240 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- ac 96.01
1mc3_A296 Glucose-1-phosphate thymidylyltransferase; glucose 95.96
2cu2_A337 Putative mannose-1-phosphate guanylyl transferase; 95.83
2ux8_A297 Glucose-1-phosphate uridylyltransferase; UGPG, GAL 95.82
1xhd_A173 Putative acetyltransferase/acyltransferase; struct 95.63
1yp2_A451 Glucose-1-phosphate adenylyltransferase small subu 95.58
3ixc_A191 Hexapeptide transferase family protein; niaid, ssg 95.36
3ixc_A191 Hexapeptide transferase family protein; niaid, ssg 95.29
3r3r_A187 Ferripyochelin binding protein; structural genomic 95.26
1v3w_A173 Ferripyochelin binding protein; beta-helix, carbon 95.25
3kwd_A213 Carbon dioxide concentrating mechanism protein; LE 95.2
1xhd_A173 Putative acetyltransferase/acyltransferase; struct 95.19
3oam_A252 3-deoxy-manno-octulosonate cytidylyltransferase; c 95.12
3c8v_A496 Putative acetyltransferase; YP_390128.1, structura 95.04
1tzf_A259 Glucose-1-phosphate cytidylyltransferase; nucleoti 94.92
3r1w_A189 Carbonic anhydrase; beta-helix, lyase; 1.73A {Unid 94.88
1qre_A247 Carbonic anhydrase; beta-helix, lyase; 1.46A {Meth 94.78
1v3w_A173 Ferripyochelin binding protein; beta-helix, carbon 94.55
2ggo_A401 401AA long hypothetical glucose-1-phosphate thymid 94.49
3r3r_A187 Ferripyochelin binding protein; structural genomic 94.46
3r8y_A240 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- ac 94.44
1qre_A247 Carbonic anhydrase; beta-helix, lyase; 1.46A {Meth 94.19
1hm9_A468 GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltr 94.16
3r1w_A189 Carbonic anhydrase; beta-helix, lyase; 1.73A {Unid 94.08
3k8d_A264 3-deoxy-manno-octulosonate cytidylyltransferase; K 94.08
3jqy_B252 NEUO, polysialic acid O-acetyltransferase; LEFT-ha 94.02
2v0h_A456 Bifunctional protein GLMU; cell WALL, magnesium, c 93.65
3vbi_A205 ANTD, galactoside O-acetyltransferase; anthrose, a 93.62
3bfp_A194 Acetyltransferase; LEFT-handed beta helix, COA bin 93.42
3ftt_A199 Putative acetyltransferase sacol2570; galactoside 93.3
1krr_A203 Galactoside O-acetyltransferase; LEFT-handed paral 93.06
4fce_A459 Bifunctional protein GLMU; GLMU. csgid, niaid, str 93.03
3tqd_A256 3-deoxy-manno-octulosonate cytidylyltransferase; c 92.92
3srt_A188 Maltose O-acetyltransferase; structural genomics, 92.87
3vbi_A205 ANTD, galactoside O-acetyltransferase; anthrose, a 92.85
3st8_A501 Bifunctional protein GLMU; acetyltransferase, pyro 92.65
3gos_A276 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su 92.62
3nz2_A195 Hexapeptide-repeat containing-acetyltransferase; s 92.56
4ea9_A220 Perosamine N-acetyltransferase; beta helix, acetyl 92.54
2pig_A334 Putative transferase; SCR6, NESG, YDCK, structural 92.43
3ftt_A199 Putative acetyltransferase sacol2570; galactoside 92.32
3fsy_A332 Tetrahydrodipicolinate N-succinyltransferase; beta 92.29
3eg4_A304 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su 92.24
3pmo_A372 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; 92.16
3bfp_A194 Acetyltransferase; LEFT-handed beta helix, COA bin 92.14
2p2o_A185 Maltose transacetylase; GK1921, GKA001001921.1, ge 92.1
3nz2_A195 Hexapeptide-repeat containing-acetyltransferase; s 92.08
2pig_A334 Putative transferase; SCR6, NESG, YDCK, structural 92.03
4ea9_A220 Perosamine N-acetyltransferase; beta helix, acetyl 91.8
3hjj_A190 Maltose O-acetyltransferase; LEFT-handed beta-heli 91.6
1ocx_A182 Maltose O-acetyltransferase; LEFT-handed parallel 91.59
3hjj_A190 Maltose O-acetyltransferase; LEFT-handed beta-heli 91.57
2iu8_A374 LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-a 91.5
2p2o_A185 Maltose transacetylase; GK1921, GKA001001921.1, ge 91.44
3tk8_A316 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su 91.33
3gos_A276 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su 91.26
3fsy_A332 Tetrahydrodipicolinate N-succinyltransferase; beta 91.21
2wlg_A215 Polysialic acid O-acetyltransferase; enzyme, LEFT- 91.15
3tk8_A316 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su 91.1
1j2z_A270 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam 91.02
3pmo_A372 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; 90.91
3mc4_A287 WW/RSP5/WWP domain:bacterial transferase hexapept 90.84
3eev_A212 Chloramphenicol acetyltransferase; beta-helix, str 90.82
3tv0_A194 Dynactin subunit 6; LEFT-handed beta-helix, ARP11, 90.8
3eg4_A304 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- su 90.39
4hur_A220 Virginiamycin A acetyltransferase; structural geno 90.28
3r5d_A347 Tetrahydrodipicolinate N-succinyletransferase; 1.8 90.27
3r5d_A347 Tetrahydrodipicolinate N-succinyletransferase; 1.8 90.2
3jqy_B252 NEUO, polysialic acid O-acetyltransferase; LEFT-ha 90.18
3mqg_A192 Lipopolysaccharides biosynthesis acetyltransferas; 89.95
3eh0_A341 UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltr 89.67
1krr_A203 Galactoside O-acetyltransferase; LEFT-handed paral 89.65
1ocx_A182 Maltose O-acetyltransferase; LEFT-handed parallel 89.51
3eh0_A341 UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltr 89.18
1jv1_A505 Glcnac1P uridyltransferase isoform 1: AGX1; nucleo 88.86
3t57_A305 UDP-N-acetylglucosamine O-acyltransferase domain- 88.68
4eqy_A283 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam 88.63
3t57_A305 UDP-N-acetylglucosamine O-acyltransferase domain- 88.63
4e79_A357 UDP-3-O-acylglucosamine N-acyltransferase; lipopol 88.62
1ssq_A267 SAT, serine acetyltransferase; LEFT-handed paralle 88.5
3srt_A188 Maltose O-acetyltransferase; structural genomics, 88.32
3mc4_A287 WW/RSP5/WWP domain:bacterial transferase hexapept 88.22
1j2z_A270 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam 88.17
3r0s_A266 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam 87.99
1t3d_A289 SAT, serine acetyltransferase; LEFT-handed-beta-he 87.95
3f1x_A310 Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 87.81
2qia_A262 UDP-N-acetylglucosamine acyltransferase; LEFT-hand 87.73
3r0s_A266 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam 87.52
3fs8_A273 QDTC; acetyltransferase, natural product, deoxysug 87.3
2rij_A387 Putative 2,3,4,5-tetrahydropyridine-2-carboxylate 87.24
4eqy_A283 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam 87.13
2qia_A262 UDP-N-acetylglucosamine acyltransferase; LEFT-hand 87.08
1ssq_A267 SAT, serine acetyltransferase; LEFT-handed paralle 87.02
2wlg_A215 Polysialic acid O-acetyltransferase; enzyme, LEFT- 86.95
3f1x_A310 Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 86.61
3fs8_A273 QDTC; acetyltransferase, natural product, deoxysug 86.31
3q1x_A313 Serine acetyltransferase; cysteine biosynthesis, L 84.81
3hsq_A259 Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosam 84.72
4e6u_A265 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam 84.67
1t3d_A289 SAT, serine acetyltransferase; LEFT-handed-beta-he 84.51
4hur_A220 Virginiamycin A acetyltransferase; structural geno 83.85
4e6u_A265 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam 83.65
3eev_A212 Chloramphenicol acetyltransferase; beta-helix, str 83.13
3hsq_A259 Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosam 82.78
2i5k_A488 UTP--glucose-1-phosphate uridylyltransferase; LEFT 82.72
4e8l_A219 Virginiamycin A acetyltransferase; structural geno 82.33
1jyk_A254 LICC protein, CTP:phosphocholine cytidylytransfera 82.22
2y6p_A234 3-deoxy-manno-octulosonate cytidylyltransferase; l 81.47
2icy_A469 Probable UTP-glucose-1-phosphate uridylyltransfera 80.81
>3k85_A D-glycero-D-manno-heptose 1-phosphate kinase; bacteriodes thetaiotaomicron, protein structure initiative II(PSI II), nysgxrc; 2.28A {Bacteroides thetaiotaomicron} Back     alignment and structure
Probab=100.00  E-value=1.6e-45  Score=423.61  Aligned_cols=316  Identities=25%  Similarity=0.379  Sum_probs=237.4

Q ss_pred             EEEEeceEEeeeccccccCCcccCCCceEEEEeeecCcccceeEEEEEcCCCcEEEEeCCCCceeeecCCCCCCCCCCCC
Q 001402          740 VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLHIEDLTPIATPFDHND  819 (1084)
Q Consensus       740 v~v~aP~Ri~L~Ge~tD~~py~~~~GG~Vl~~AI~l~~~~pi~v~v~~~~~~~i~i~s~~~~~~~~~~l~~l~~p~~~~~  819 (1084)
                      ++++|||||+|+||||||++|++.+||.||++||+++++    ++++++++..|++.+.+.......++.+   +...++
T Consensus         4 i~~~APgRvnL~GehtD~~~~~~~~gG~vl~~AId~~~~----v~i~~~~d~~i~i~s~~~~~~~~~~~~~---~~~~~~   76 (357)
T 3k85_A            4 VRSKAPLRLGLAGGGSDVSPYSDIYGGLILNATINLYAY----CTIEETNSGRIEINAYDAQCCKSYLSMS---QLEIDG   76 (357)
T ss_dssp             EEEEEEEEEEEECTTTTSTTHHHHTCEEEEEEEEEEEEE----EEEEECSSSEEEEEETTTTEEEEEECCS---SCCCCS
T ss_pred             EEEECceEEEEecCCccCcchhhcCCCEEEEEEEeCcEE----EEEEECCCCeEEEEECCCCceEEEeccc---cccccc
Confidence            789999999999999999999999999999999999986    7788888888999886554322223222   123357


Q ss_pred             hHHHHHHHHHHhhhhhhhcc-cccCEEEEEEecCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-hcC
Q 001402          820 PFRLVKSALLVTGVIHEKLI-ESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQ-LMG  897 (1084)
Q Consensus       820 ~~~lvkaal~~~g~~~~~~~-~~~G~~I~i~S~IP~GsGLGSSSAlavA~l~Al~~l~g~~ls~~eLa~la~~~E~-~~g  897 (1084)
                      |.+|+++++..+..   .+. ...|++|++.++||.|+|||||||+++|++.|+++++++++++++|+++|..+|+ +.|
T Consensus        77 ~~~~v~~~~~~l~~---~~~~~~~g~~i~i~~~iP~g~GLgSSaa~~va~~~al~~~~~~~l~~~~l~~~a~~~E~~~~G  153 (357)
T 3k85_A           77 EASLIKGVYNRIIR---DYRLEPKSFKITTYNDAPAGSGLGTSSTMVVCILKAFIEWLSLPLGDYETSRLAYEIERKDLG  153 (357)
T ss_dssp             SSHHHHHHHHHHHH---HTTCCCCCEEEEEEESSCSSSSSCHHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHTTTC
T ss_pred             hHHHHHHHHHHHHH---hcCCCCCCEEEEEecCCCCCCCchHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHcc
Confidence            89999999987752   232 2579999999999999999999999999999999999999999999999999998 679


Q ss_pred             CCCcccchhhhcccceEEEecCCCccceeEEEEccCChhhhhccCcEEEEEEcCCcchHHHHHHHHHHHHhhcChHHHHH
Q 001402          898 TGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLLASPQLILELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISS  977 (1084)
Q Consensus       898 t~~G~~Dq~a~~~GG~~~~~~~~g~~~~~~v~pl~~~~~~~~~l~~~lvlv~tg~tr~T~~iL~~v~~~~~~~~~~~~~~  977 (1084)
                      ++||+|||+++++||...+.+.++.  ...++++++++....+++..++|++|+.+++|+++++++++.+...+....+.
T Consensus       154 ~~~G~~D~~a~~~Gg~~~~~~~~~~--~~~~~~l~~~~~~~~~l~~~lvi~~t~~~~~a~~~l~~~~~~~~~~~~~~~~~  231 (357)
T 3k85_A          154 LSGGKQDQYAAAFGGFNYMEFLQND--LVIVNPLKMKRWIVDELESSMVLYFTGRSRSSAAIINEQKKNTSEGNQTAIEA  231 (357)
T ss_dssp             CCCCSHHHHHHHHCSEEEEEEETTT--EEEEEEECCCHHHHHHHHHTEEEECC---------------------CCTTHH
T ss_pred             CCCcHHHHHHHHhCCceEEEEeCCC--ceeEEEEecChhhhhhcCceEEEEECCCcccHHHHHHHHHHHhhcCcHHHHHH
Confidence            9999999999999999988765543  34577888776543334568999999999999999998765543332233456


Q ss_pred             HHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHhhcCCCCCcHHHHHHHHHHcC-CCCeEEEcCCCccceeEEEEcChh
Q 001402          978 IKRLTELAKNGRDALMNCDVDELGKIMLEAWRLHQELDPHCSNEFVDRLFAFADP-YCCGYKLVGAGGGGFALLLAKDAE 1056 (1084)
Q Consensus       978 l~~l~~~a~~~~~AL~~gD~~~lg~lm~~s~~~~~~l~~~vs~p~ld~li~~a~~-ga~GaklSGAGgGG~viaL~~~~~ 1056 (1084)
                      ++.+.+.+.++++||.++|++.|+++|+++|++++++..++++|+++.+++.+++ |++|+||||||+|||+++|+++ +
T Consensus       232 ~~~i~~~~~~~~~aL~~~d~~~lg~lm~~~~~~l~~~~~~vs~p~ld~l~~~a~~~Ga~GaklsGaG~gG~vial~~~-~  310 (357)
T 3k85_A          232 MHKIKQSAIDTKLALLKGDVGEFARILGEGWENKKKMAGAITNPMIQEAFDVATGAGAMAGKVSGAGGGGFIMFVVEP-T  310 (357)
T ss_dssp             HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHTTC-----------CCSCTTTTSCCSEEEECCCC---CEEEECCH-H
T ss_pred             HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHhcCCeEeEecccCCCCEEEEEecH-H
Confidence            7777788889999999999999999999999999886225899999999999987 8999999999999999999985 6


Q ss_pred             hHHHHHHHHHhc
Q 001402         1057 SATELRRMLEKD 1068 (1084)
Q Consensus      1057 ~ae~i~~~L~~~ 1068 (1084)
                      .++++.++|++.
T Consensus       311 ~~~~~~~~l~~~  322 (357)
T 3k85_A          311 RKEEVVRALNNL  322 (357)
T ss_dssp             HHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHC
Confidence            789999999875
>3k17_A LIN0012 protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics, NEW YORK SGX research center for structural genomics; HET: PGE; 2.10A {Listeria innocua} Back     alignment and structure
>4hac_A Mevalonate kinase; GHMP, ATP binding, phosphorylation, transferase; 1.92A {Methanosarcina mazei} Back     alignment and structure
>3v2u_C Protein GAL3; rossmann fold, GHMP superfamily, transcription regulation, transcription; HET: GLA ATP; 2.10A {Saccharomyces cerevisiae} PDB: 3v5r_A 2aj4_A* Back     alignment and structure
>3gon_A Phosphomevalonate kinase; GHMP kinase superfamily, ATP-binding, nucleotide- binding, transferase; HET: PMV ANP; 1.90A {Streptococcus pneumoniae} PDB: 1k47_A Back     alignment and structure
>2a2c_A N-acetylgalactosamine kinase; galactokinase, , transferase; HET: NG1 ADP; 1.65A {Homo sapiens} PDB: 2a2d_A* Back     alignment and structure
>1pie_A Galactokinase; galactose, galactosemia, transferase; HET: GLA; 2.10A {Lactococcus lactis} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>1wuu_A Galactokinase; galactosemia, GHMP superfamily, transferase; HET: GLA ANP; 2.50A {Homo sapiens} SCOP: d.14.1.5 d.58.26.7 Back     alignment and structure
>1kvk_A MK, mevalonate kinase; RMK, ATP, GHMP, transferase; HET: ATP; 2.40A {Rattus norvegicus} SCOP: d.14.1.5 d.58.26.3 PDB: 2r42_A* 2r3v_A Back     alignment and structure
>2hfs_A Mevalonate kinase, putative; GHMP kinase, trypanosomatid parasite, transferase; 1.75A {Leishmania major} PDB: 2hfu_A* Back     alignment and structure
>2cz9_A Probable galactokinase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.50A {Pyrococcus horikoshii} PDB: 2dei_A* 2dej_A* 1s4e_A* Back     alignment and structure
>2x7i_A Mevalonate kinase; transferase; HET: CIT; 2.20A {Staphylococcus aureus} Back     alignment and structure
>1kkh_A Mevalonate kinase; mixed beta sheet, phosphate-binding loop, beta-alpha-beta, transferase; 2.40A {Methanocaldococcus jannaschii} SCOP: d.14.1.5 d.58.26.3 PDB: 1vis_A Back     alignment and structure
>2oi2_A Mevalonate kinase; enzyme-inhibitor complex, transferase; HET: DP6; 2.50A {Streptococcus pneumoniae} Back     alignment and structure
>1h72_C HK, homoserine kinase; transferase, threonine biosynthesis; HET: ANP; 1.8A {Methanococcus jannaschii} SCOP: d.14.1.5 d.58.26.1 PDB: 1fwl_A 1fwk_A* 1h73_A* 1h74_A* Back     alignment and structure
>3hul_A HSK, HK, homoserine kinase; structural genomics, putative homoserine kinase, THRB, amino-acid biosynthesis, ATP-binding, cytoplasm; 2.19A {Listeria monocytogenes} Back     alignment and structure
>3pyf_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; transferase; HET: ANP; 1.70A {Mycobacterium tuberculosis} PDB: 3pyd_A* 3pye_A* 3pyg_A* 4ed4_A* 4dxl_A* 4emd_A* Back     alignment and structure
>3qt5_A Mevalonate diphosphate decarboxylase; GHMP kinase family, lyase; 1.85A {Staphylococcus epidermidis} PDB: 3qt6_A* 3qt7_A* 4dpt_A* 4du7_A* 4dpu_A* 3qt8_A* 4dpx_A 4dpy_A* 4du8_A* 4dpw_A* 2hk2_A 2hk3_A Back     alignment and structure
>2gs8_A Mevalonate pyrophosphate decarboxylase; streptococcus pyogen structural genomics, PSI, protein structure initiative; HET: MSE; 1.50A {Streptococcus pyogenes m1 gas} Back     alignment and structure
>2v8p_A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; nucleotide-binding, isoprene biosynthesis, transferase, ATP-binding, non-mevalonate; HET: CDP ADP; 2.1A {Aquifex aeolicus} PDB: 2v2v_A* 2v2q_A* 2v34_A* 2v2z_A* 2vf3_A* Back     alignment and structure
>2ww4_A 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; non-mevalonate pathway, isoprenoid biosynthesis, transferase; HET: ADP; 2.00A {Escherichia coli} PDB: 1oj4_A* Back     alignment and structure
>1uek_A 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase; non-mevalonate pathway, GHMP superfamily; 1.70A {Thermus thermophilus} SCOP: d.14.1.5 d.58.26.5 Back     alignment and structure
>1fi4_A Mevalonate 5-diphosphate decarboxylase; mixed alpha/beta structure, ATP binding, CHOL biosynthesis, structural genomics, PSI; 2.27A {Saccharomyces cerevisiae} SCOP: d.14.1.5 d.58.26.2 Back     alignment and structure
>2hke_A Diphosphomevalonate decarboxylase, putative; mevalonate diphosphate decarboxylase, lyase; 1.80A {Trypanosoma brucei} Back     alignment and structure
>3lto_A Mevalonate diphosphate decarboxylase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.27A {Legionella pneumophila} Back     alignment and structure
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} Back     alignment and structure
>3f0n_A Mevalonate pyrophosphate decarboxylase; cholesterol biosynthesis, lipid synthesis, lyase, steroid biosynthesis, sterol biosynthesis; 1.90A {Mus musculus} PDB: 3d4j_A Back     alignment and structure
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* Back     alignment and structure
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* Back     alignment and structure
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* Back     alignment and structure
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A* Back     alignment and structure
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* Back     alignment and structure
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* Back     alignment and structure
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* Back     alignment and structure
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>3juk_A UDP-glucose pyrophosphorylase (GALU); transfer; HET: UPG; 2.30A {Helicobacter pylori} PDB: 3juj_A* Back     alignment and structure
>4ecm_A Glucose-1-phosphate thymidylyltransferase; HET: DAU; 2.30A {Bacillus anthracis} PDB: 3hl3_A* Back     alignment and structure
>2qh5_A PMI, ALGA, mannose-6-phosphate isomerase; structural genomics, PSI, protein structure initi nysgrc; 2.30A {Helicobacter pylori} Back     alignment and structure
>3pnn_A Conserved domain protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE GOL; 1.90A {Porphyromonas gingivalis} Back     alignment and structure
>2pa4_A UTP-glucose-1-phosphate uridylyltransferase; phosphorylase, nucleotidyltransferase, metabolism; HET: GUD; 2.00A {Corynebacterium glutamicum atcc 13032} Back     alignment and structure
>2x65_A Mannose-1-phosphate guanylyltransferase; nucleotidyltransferase; HET: M1P; 2.10A {Thermotoga maritima} PDB: 2x5z_A* 2x60_A* 2x5s_A* Back     alignment and structure
>4evw_A Nucleoside-diphosphate-sugar pyrophosphorylase; structural genomics, PSI-biology; HET: MSE; 1.90A {Vibrio cholerae} Back     alignment and structure
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A Back     alignment and structure
>2e3d_A UTP--glucose-1-phosphate uridylyltransferase; UDP-glucose, carbohydrate, pyrophosphorylase; 1.95A {Escherichia coli} Back     alignment and structure
>1fxo_A Glucose-1-phosphate thymidylyltransferase; rhamnose, nucleotidyltransferase, pyrophosphorylase, allostery; HET: TMP; 1.66A {Pseudomonas aeruginosa} SCOP: c.68.1.6 PDB: 1fzw_A 1g0r_A* 1g1l_A* 1g23_A* 1g2v_A* 1g3l_A* 1h5r_A* 1h5s_C* 1h5t_A* 1h5s_D* 1h5s_A* 1h5r_B* 1h5s_B* 1h5t_B* 1iim_A* 1iin_A* 3pkp_A* 3pkq_A* 1mp5_A* 1mp3_A* ... Back     alignment and structure
>1lvw_A Glucose-1-phosphate thymidylyltransferase; protein nucleotide complex, nucleotide binding fold; HET: TYD; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.68.1.6 Back     alignment and structure
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens} Back     alignment and structure
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A* Back     alignment and structure
>1mc3_A Glucose-1-phosphate thymidylyltransferase; glucose-1-phosphate thymidylytransferase, RFFH; HET: TTP; 2.60A {Escherichia coli} SCOP: c.68.1.6 Back     alignment and structure
>2cu2_A Putative mannose-1-phosphate guanylyl transferase; mannose-1-phosphate geranyltransferase, thermus thermophilus structural genomics; 2.20A {Thermus thermophilus} SCOP: b.81.4.1 c.68.1.20 Back     alignment and structure
>2ux8_A Glucose-1-phosphate uridylyltransferase; UGPG, GALU pyrophosphorylase, nucleotidyltransferase; HET: G1P; 2.65A {Sphingomonas elodea} Back     alignment and structure
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A Back     alignment and structure
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A* Back     alignment and structure
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum} Back     alignment and structure
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum} Back     alignment and structure
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A Back     alignment and structure
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A Back     alignment and structure
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A Back     alignment and structure
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A Back     alignment and structure
>3oam_A 3-deoxy-manno-octulosonate cytidylyltransferase; center for structural genomics of infectious diseases; 1.75A {Vibrio cholerae o1 biovar el tor} SCOP: c.68.1.13 Back     alignment and structure
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp} Back     alignment and structure
>1tzf_A Glucose-1-phosphate cytidylyltransferase; nucleotidyltransferase, mixed alpha/beta fold; HET: C5G; 2.10A {Salmonella enterica subsp} SCOP: c.68.1.13 PDB: 1wvc_A* Back     alignment and structure
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified} Back     alignment and structure
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A Back     alignment and structure
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A Back     alignment and structure
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A* Back     alignment and structure
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A Back     alignment and structure
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A* Back     alignment and structure
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A Back     alignment and structure
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A* Back     alignment and structure
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified} Back     alignment and structure
>3k8d_A 3-deoxy-manno-octulosonate cytidylyltransferase; KDSB synthetase KDO complex, lipopolysaccharide biosynthesis magnesium, nucleotidyltransferase; HET: KDO CTP; 1.90A {Escherichia coli} SCOP: c.68.1.13 PDB: 3k8e_C 1vh1_A 3jtj_A* Back     alignment and structure
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli} Back     alignment and structure
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A* Back     alignment and structure
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A* Back     alignment and structure
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A Back     alignment and structure
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A Back     alignment and structure
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A* Back     alignment and structure
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A* Back     alignment and structure
>3tqd_A 3-deoxy-manno-octulosonate cytidylyltransferase; cell envelope; 1.80A {Coxiella burnetii} SCOP: c.68.1.0 Back     alignment and structure
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A* Back     alignment and structure
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A* Back     alignment and structure
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A* Back     alignment and structure
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A Back     alignment and structure
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A* Back     alignment and structure
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A* Back     alignment and structure
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A Back     alignment and structure
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A Back     alignment and structure
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A* Back     alignment and structure
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis} Back     alignment and structure
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa} Back     alignment and structure
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A Back     alignment and structure
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A Back     alignment and structure
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A* Back     alignment and structure
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A Back     alignment and structure
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A* Back     alignment and structure
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A* Back     alignment and structure
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3 Back     alignment and structure
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A* Back     alignment and structure
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A* Back     alignment and structure
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A Back     alignment and structure
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei} Back     alignment and structure
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A Back     alignment and structure
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A* Back     alignment and structure
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A* Back     alignment and structure
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei} Back     alignment and structure
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1 Back     alignment and structure
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa} Back     alignment and structure
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus} Back     alignment and structure
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3 Back     alignment and structure
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens} Back     alignment and structure
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis} Back     alignment and structure
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A Back     alignment and structure
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A Back     alignment and structure
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A Back     alignment and structure
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli} Back     alignment and structure
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A* Back     alignment and structure
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli} Back     alignment and structure
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A* Back     alignment and structure
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3 Back     alignment and structure
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli} Back     alignment and structure
>1jv1_A Glcnac1P uridyltransferase isoform 1: AGX1; nucleotidyltransferase, alternative splicing; HET: UD1; 1.90A {Homo sapiens} SCOP: c.68.1.5 PDB: 1jv3_A* 1jvg_A* 1jvd_A* 1vm8_A* Back     alignment and structure
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis} Back     alignment and structure
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana} Back     alignment and structure
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A Back     alignment and structure
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A* Back     alignment and structure
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A* Back     alignment and structure
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus} Back     alignment and structure
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1 Back     alignment and structure
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0 Back     alignment and structure
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6 Back     alignment and structure
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A Back     alignment and structure
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0 Back     alignment and structure
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A* Back     alignment and structure
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni} Back     alignment and structure
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis} Back     alignment and structure
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A Back     alignment and structure
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A* Back     alignment and structure
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A* Back     alignment and structure
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482} Back     alignment and structure
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A* Back     alignment and structure
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A Back     alignment and structure
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A* Back     alignment and structure
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A* Back     alignment and structure
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6 Back     alignment and structure
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A Back     alignment and structure
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A* Back     alignment and structure
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3 Back     alignment and structure
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A* Back     alignment and structure
>2i5k_A UTP--glucose-1-phosphate uridylyltransferase; LEFT-handed beta-helix, SGC domain; 3.10A {Saccharomyces cerevisiae} Back     alignment and structure
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus} Back     alignment and structure
>1jyk_A LICC protein, CTP:phosphocholine cytidylytransferase; 3D structure, CTP:phosphocholine cytidylyltransferase; 1.50A {Streptococcus pneumoniae} SCOP: c.68.1.13 PDB: 1jyl_A* Back     alignment and structure
>2y6p_A 3-deoxy-manno-octulosonate cytidylyltransferase; lipid A; HET: CTP; 2.10A {Aquifex aeolicus} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1084
d1k47a2135 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PM 1e-17
d1kvka2169 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Ratt 1e-14
d1kkha2137 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon 4e-14
d1s4ea1176 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococ 2e-12
d1piea1205 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lact 7e-07
d1wuua1215 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapi 1e-04
d1s4ea2171 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyro 2e-04
d1piea2183 d.58.26.7 (A:214-396) Galactokinase {Lactococcus l 0.004
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Length = 135 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Ferredoxin-like
superfamily: GHMP Kinase, C-terminal domain
family: Phosphomevalonate kinase (PMK)
domain: Phosphomevalonate kinase (PMK)
species: Streptococcus pneumoniae r6 [TaxId: 171101]

 Score = 78.2 bits (192), Expect = 1e-17
 Identities = 25/128 (19%), Positives = 54/128 (42%), Gaps = 6/128 (4%)

Query: 940  ELQQRLLVVFTGQVRLAHQVLQKVVTRYLQRDNLLISSIKRLTELAKNGRDALMNCDVDE 999
             L+   LV +T +V ++  ++Q++      + N+  + +    E   +  +AL     ++
Sbjct: 3    TLECDFLVGWTKEVAVSSHMVQQI------KQNINQNFLTSSKETVVSLVEALEQGKSEK 56

Query: 1000 LGKIMLEAWRLHQELDPHCSNEFVDRLFAFADPYCCGYKLVGAGGGGFALLLAKDAESAT 1059
            + + +  A +L + L        + +L   +       K  GAGGG   + L+ DA+S  
Sbjct: 57   IIEQVEVASKLLEGLSTDIYTPLLRQLKEASQDLQAVAKSSGAGGGDCGIALSFDAQSTK 116

Query: 1060 ELRRMLEK 1067
             L+     
Sbjct: 117  TLKNRWAD 124
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 169 Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Length = 137 Back     information, alignment and structure
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 176 Back     information, alignment and structure
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 205 Back     information, alignment and structure
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Length = 215 Back     information, alignment and structure
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Length = 171 Back     information, alignment and structure
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Length = 183 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1084
d1piea1205 Galactokinase {Lactococcus lactis [TaxId: 1358]} 99.95
d1s4ea1176 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 99.94
d1wuua1215 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 99.93
d1kkha1180 Mevalonate kinase {Archaeon Methanococcus jannasch 99.91
d1kvka1225 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 99.84
d1k47a1194 Phosphomevalonate kinase (PMK) {Streptococcus pneu 99.75
d1h72c1163 Homoserine kinase {Archaeon Methanococcus jannasch 99.74
d1k47a2135 Phosphomevalonate kinase (PMK) {Streptococcus pneu 99.71
d1kvka2169 Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 99.69
d1kkha2137 Mevalonate kinase {Archaeon Methanococcus jannasch 99.63
d1wuua2176 Galactokinase {Human (Homo sapiens) [TaxId: 9606]} 99.57
d1s4ea2171 Galactokinase {Archaeon Pyrococcus furiosus [TaxId 99.55
d1piea2183 Galactokinase {Lactococcus lactis [TaxId: 1358]} 99.51
d1oj4a1163 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 99.07
d1ueka1148 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 98.94
d1fxoa_292 RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} 98.72
d1yp2a2307 Glucose-1-phosphate adenylyltransferase small subu 98.47
d1h72c2133 Homoserine kinase {Archaeon Methanococcus jannasch 98.09
d1yp2a1135 Glucose-1-phosphate adenylyltransferase small subu 98.03
d1mc3a_291 RffH {Escherichia coli [TaxId: 562]} 97.93
d1ueka2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 97.52
d2cu2a2268 Putative mannose-1-phosphate guanylyl transferase 97.42
d1lvwa_295 RmlA (RfbA) {Archaeon Methanobacterium thermoautot 97.4
d1fxja178 N-acetylglucosamine 1-phosphate uridyltransferase 97.4
d1fi4a1188 Mevalonate 5-diphosphate decarboxylase {Baker's ye 97.32
d1yp2a1135 Glucose-1-phosphate adenylyltransferase small subu 97.09
d1fxja178 N-acetylglucosamine 1-phosphate uridyltransferase 96.63
d1oj4a2120 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol k 96.34
d1qrea_210 gamma-carbonic anhydrase {Archaeon Methanosarcina 94.16
d1krra_200 Galactoside acetyltransferase {Escherichia coli [T 91.11
d1ocxa_182 Maltose O-acetyltransferase {Escherichia coli [Tax 90.45
d1j2za_259 UDP N-acetylglucosamine acyltransferase {Helicobac 90.03
d1qrea_210 gamma-carbonic anhydrase {Archaeon Methanosarcina 88.15
d1v3wa_173 Ferripyochelin binding protein {Archaeon Pyrococcu 87.82
d1xhda_172 Putative acetyltransferase/acyltransferase BC4754 87.0
d2icya2378 UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale c 85.76
d2jf2a1262 UDP N-acetylglucosamine acyltransferase {Escherich 84.43
d1fi4a2203 Mevalonate 5-diphosphate decarboxylase {Baker's ye 83.48
d1j2za_259 UDP N-acetylglucosamine acyltransferase {Helicobac 83.21
d3tdta_274 Tetrahydrodipicolinate-N-succinlytransferase, THDP 83.02
d3tdta_274 Tetrahydrodipicolinate-N-succinlytransferase, THDP 82.52
d1g97a1196 N-acetylglucosamine 1-phosphate uridyltransferase 81.09
d2jf2a1262 UDP N-acetylglucosamine acyltransferase {Escherich 81.07
d1krra_200 Galactoside acetyltransferase {Escherichia coli [T 80.61
d1ssqa_241 Serine acetyltransferase {Haemophilus influenzae [ 80.29
>d1piea1 d.14.1.5 (A:9-213) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Ribosomal protein S5 domain 2-like
superfamily: Ribosomal protein S5 domain 2-like
family: GHMP Kinase, N-terminal domain
domain: Galactokinase
species: Lactococcus lactis [TaxId: 1358]

Probab=99.95  E-value=1.2e-27  Score=251.53  Aligned_cols=180  Identities=18%  Similarity=0.198  Sum_probs=142.7

Q ss_pred             EEEEeceEEeeeccccccCCcccCCCceEEEEeeecCcccceeEEEEEcCCCcEEEEeCCCCcee--eecCCCCCCCCCC
Q 001402          740 VKVELPVRIDFAGGWSDTPPWSLERAGCVLNVAISLESSLPIGTIIETTKMSGVLISDDAGNQLH--IEDLTPIATPFDH  817 (1084)
Q Consensus       740 v~v~aP~Ri~L~Ge~tD~~py~~~~GG~Vl~~AI~l~~~~pi~v~v~~~~~~~i~i~s~~~~~~~--~~~l~~l~~p~~~  817 (1084)
                      ..++|||||+|+|||+||.      ||.|+++||+++++    +.++++++..+++.+.......  ..+..++..+ ..
T Consensus        21 ~~~~aPgRv~L~GeH~Dy~------gg~vl~~AI~~~~~----v~~~~~~d~~i~i~s~~~~~~~~~~~~~~~~~~~-~~   89 (205)
T d1piea1          21 EYFFSPGRINLIGEHTDYN------GGYVFPASITIGTT----GLARLREDKKVKLYSENFPKLGVIEFDLDEVEKK-DG   89 (205)
T ss_dssp             EEEEEEEEEEEECCSCTTT------TCEEEEEEEEEEEE----EEEEECSSSEEEEEETTCGGGCCEEEETTCTTSC-CT
T ss_pred             eEEEcceEEEEecCCeeEC------CCEeecccccceEE----EEEecCCCCeeeeecCCCCccceeeccccccccc-cc
Confidence            4778999999999999996      99999999999976    7888998899999886554322  2233344322 34


Q ss_pred             CChHHHHHHHHHHhhhhhhhcccccCEEEEEEecCCCCCCCChHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHH-hc
Q 001402          818 NDPFRLVKSALLVTGVIHEKLIESMGLQIRTWANVPRGSGLGTSSILAAAVVKALLQITDGDQSNENVARLVLLLEQ-LM  896 (1084)
Q Consensus       818 ~~~~~lvkaal~~~g~~~~~~~~~~G~~I~i~S~IP~GsGLGSSSAlavA~l~Al~~l~g~~ls~~eLa~la~~~E~-~~  896 (1084)
                      ..|.+|+++++..+..  .......||+|.+.|+||.|+|||||||++||++.|+++++++++++.+++++|+++|+ ++
T Consensus        90 ~~~~~~~~~~i~~l~~--~~~~~~~G~~i~i~s~iP~gsGLgSSAAl~va~~~al~~~~~~~~~~~~ia~~a~~~E~~~~  167 (205)
T d1piea1          90 ELWSNYVKGMIVMLKG--AGYEIDKGFELLIKGEIPTASGLSSSASLELLVGVVLDDLFNLNVPRLELVQLGQKTENDYI  167 (205)
T ss_dssp             TCTHHHHHHHHHHHHH--TTCCCCSCEEEEEEECSCTTSSSCHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTT
T ss_pred             cchhHHHHHHHHHHHH--hCCccccCeEEEEecCCccccccCccHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHhhc
Confidence            5699999999987642  11223579999999999999999999999999999999999999999999999999998 68


Q ss_pred             CCCCcccchhhhcccceEEEecCCCccceeEEEEcc
Q 001402          897 GTGGGWQDQIGGLYPGIKFTSSFPGIPLRLQVIPLL  932 (1084)
Q Consensus       897 gt~~G~~Dq~a~~~GG~~~~~~~~g~~~~~~v~pl~  932 (1084)
                      |++||+|||+++++||.+.+.+.+..+.+++..|++
T Consensus       168 g~~~G~~Dq~as~~g~~~~~~~~d~~~~~~~~ip~~  203 (205)
T d1piea1         168 GVNSGILDQFAIGFGEVKKAIELDCNTLKYEMVPVE  203 (205)
T ss_dssp             CCCCCSHHHHHHHHCBTTEEEEEETTTCCEEEEECC
T ss_pred             CCCCcHHHHHHHHhcCCCeEEEEECCCCcEEecCcc
Confidence            999999999999999954333333333344444443
>d1s4ea1 d.14.1.5 (A:5-180) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1wuua1 d.14.1.5 (A:2-216) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1kkha1 d.14.1.5 (A:1-180) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1kvka1 d.14.1.5 (A:1-225) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1k47a1 d.14.1.5 (A:1-194) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1h72c1 d.14.1.5 (C:5-167) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1k47a2 d.58.26.4 (A:195-329) Phosphomevalonate kinase (PMK) {Streptococcus pneumoniae r6 [TaxId: 171101]} Back     information, alignment and structure
>d1kvka2 d.58.26.3 (A:226-394) Mevalonate kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1kkha2 d.58.26.3 (A:181-317) Mevalonate kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1wuua2 d.58.26.7 (A:217-392) Galactokinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s4ea2 d.58.26.7 (A:181-351) Galactokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1piea2 d.58.26.7 (A:214-396) Galactokinase {Lactococcus lactis [TaxId: 1358]} Back     information, alignment and structure
>d1oj4a1 d.14.1.5 (A:1-163) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ueka1 d.14.1.5 (A:1-148) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1fxoa_ c.68.1.6 (A:) RmlA (RfbA) {Pseudomonas aeruginosa [TaxId: 287]} Back     information, alignment and structure
>d1yp2a2 c.68.1.6 (A:10-316) Glucose-1-phosphate adenylyltransferase small subunit, catalytic domain {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1h72c2 d.58.26.1 (C:168-300) Homoserine kinase {Archaeon Methanococcus jannaschii [TaxId: 2190]} Back     information, alignment and structure
>d1yp2a1 b.81.1.4 (A:317-451) Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1mc3a_ c.68.1.6 (A:) RffH {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ueka2 d.58.26.5 (A:149-268) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d2cu2a2 c.68.1.20 (A:1-268) Putative mannose-1-phosphate guanylyl transferase (GDP)/mannose-6-phosphate isomerase TTHA1750 {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1lvwa_ c.68.1.6 (A:) RmlA (RfbA) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1fxja1 b.81.1.4 (A:252-329) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1fi4a1 d.14.1.5 (A:3-190) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1yp2a1 b.81.1.4 (A:317-451) Glucose-1-phosphate adenylyltransferase small subunit, C-terminal domain {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1fxja1 b.81.1.4 (A:252-329) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1oj4a2 d.58.26.5 (A:164-283) 4-(cytidine 5'-diphospho)-2C-methyl-D-erythritol kinase IspE {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1qrea_ b.81.1.5 (A:) gamma-carbonic anhydrase {Archaeon Methanosarcina thermophila [TaxId: 2210]} Back     information, alignment and structure
>d1krra_ b.81.1.3 (A:) Galactoside acetyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ocxa_ b.81.1.3 (A:) Maltose O-acetyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j2za_ b.81.1.1 (A:) UDP N-acetylglucosamine acyltransferase {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1qrea_ b.81.1.5 (A:) gamma-carbonic anhydrase {Archaeon Methanosarcina thermophila [TaxId: 2210]} Back     information, alignment and structure
>d1v3wa_ b.81.1.5 (A:) Ferripyochelin binding protein {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Back     information, alignment and structure
>d1xhda_ b.81.1.5 (A:) Putative acetyltransferase/acyltransferase BC4754 {Bacillus cereus [TaxId: 1396]} Back     information, alignment and structure
>d2icya2 c.68.1.5 (A:6-383) UDP-glucose pyrophosphorylase 2 (UDPGP 2) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Back     information, alignment and structure
>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]} Back     information, alignment and structure
>d1fi4a2 d.58.26.2 (A:191-393) Mevalonate 5-diphosphate decarboxylase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1j2za_ b.81.1.1 (A:) UDP N-acetylglucosamine acyltransferase {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d3tdta_ b.81.1.2 (A:) Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD {Mycobacterium bovis [TaxId: 1765]} Back     information, alignment and structure
>d3tdta_ b.81.1.2 (A:) Tetrahydrodipicolinate-N-succinlytransferase, THDP-succinlytransferase, DapD {Mycobacterium bovis [TaxId: 1765]} Back     information, alignment and structure
>d1g97a1 b.81.1.4 (A:252-447) N-acetylglucosamine 1-phosphate uridyltransferase GlmU, C-terminal domain {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2jf2a1 b.81.1.1 (A:1-262) UDP N-acetylglucosamine acyltransferase {Escherichia coli, gene lpxA [TaxId: 562]} Back     information, alignment and structure
>d1krra_ b.81.1.3 (A:) Galactoside acetyltransferase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1ssqa_ b.81.1.6 (A:) Serine acetyltransferase {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure