Citrus Sinensis ID: 001404

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080----
MSSDSDEDELLQMALKEQAQRRVVYDTPQPRKPVTNYVQQPKSAATQKGGRSQGKKYEEEEESEVEMLSISSGDEEVSRDRGLAAKNRARGRRDDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR
ccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccEEEEEEccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccc
ccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHEEEEEEcccccccccccccccccccccccHcccccccccccccccccHHHHHHHHHHHHHccccHHHHHHcccccccccccccccccccccccccccccccccccccEEEEcccccccccHHHHccccHHHHHccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHccccccHcccccccEEEEEEHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHccccccccccccccccccccccccccccccccccccccccccc
MSSDSDEDELLQMALKEQAQrrvvydtpqprkpvtnyvqqpksaatqkggrsqgkkyeeeeESEVEMLSIssgdeevsrdrglaaknrargrrdddgtwdgdepncwkrvDEAELARRVREMREtrtapvaqkyekkpsmaagikgfstlqsfprgmecidplglgiidnktlrlitdssgstpksdrdnvdNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRieedpegsgtAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTlfnlpstirgsiskgEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKsmedphidltnLENTVRLLLElepesdpvwhYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDlnqssgadysvtcgniqpidslpvelsgeevDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSgkfakssqvssesnlnasgnkaeekvgegkysiHSLDEVAGMIRNTISVYEIKVhntfndledsnILRSYMRDAIEEISKACQAfeakesapPVAVMVLRTLQAEITKIYIGRLcswmqgstdgiskdetwipvsilernkspytisylPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELaqnksnkesqhlqngyssdpcteslsdipgsvvdphqRLLIVISNIGYCKDELSSELYNKYKDIWLQsrekdqegtdiQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLdsgvqwgaapavkGVRDVAVELLHTLVAVHAEVFagakplldKTLGILVEGLIDTFLSLFdenqsnnlksldaNGFCQLMLELDYFEtilnpyftHDARESLKNLQGVLLEKATVSVAEAvenpghhrrptrgsedALADErqqgmtvspDDLIALAQQYSSELLQAELERTRIntacfveslpldsvpesakvaygfrgsmdpsgrnypamdspsrnyrnaqptgspsfarhrrr
MSSDSDEDELLQMALkeqaqrrvvydtpqprkpvtnyvqqpksaatqkggrsqgkkyeeeeesevemlsissgdeevsrdrglaaknrargrrdddgtwdgdepncwkrvdeaelarrvremretrtapvaqkyekkpsmaagIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRlitdssgstpksdrdnvDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKqlvkdnfdcfvsCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLfnlpstirgsiskGEFDLAVREYKKaksialpshvNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNiqpidslpvelSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKssqvssesnlnasgnkaeekvgegkySIHSLDEVAGMIRNTISVYEIKVhntfndledsnILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSIlernkspytISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEavenpghhrrptrgsedALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFveslpldsvpESAKVAYGfrgsmdpsgrNYPAMdspsrnyrnaqptgspsfarhrrr
MSSDSDEDELLQMALKEQAQRRVVYDTPQPRKPVTNYVQQPKSAATQKGGRSQGKKYeeeeesevemlsissGDEEVSRDRGLAAKNRArgrrdddgtwdgdEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR
***********************************************************************************************************************************************IKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLI**********************LMYFSDSFNAKLFLSRVH***********ALAL***********KQLVKDNFDCFVSCKTTIDDIE******************F**************************IRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKF***************************YSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSL********DMYAQLLEIQESVRLSFLNRFLDFAGHLEHIA**********************************VVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQS*******TDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSV***********************************LIALAQQYSSELLQAELERTRINTACFVESLPLD**************************************************
******E**LLQM********************************************************************************************************************************************************************************************FSDSFNAKLFLSRVHQNTSSADLEAGALALKT**********QLVKDNFDCFVSCKTTIDDIES*********************QGVS***********************QGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYK**************TVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMET*******************QDL***********************ELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGK************************GEGKYSIHSLDEVAG********************EDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNK*PYTISYLPLAFRSIMKSSMDQISLMI*******************IQESVRLSFLNRFLDFAGHLEHI************************************VDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSRE**Q**TDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKA***************************************LIALAQQY****************************************************************************
**********LQMALKEQAQRRVVYDTPQPRKPVT***********************************************LAAK**********GTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLITDS***********VDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKF**************************KYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQN********************SLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVE******************ERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSP*********************
*******DELLQMALKEQAQRRVVYD************************************SEVE**********************************GDEPNCWKRVDEAELARRVREMRETRT****QK**************STL*SFPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQD*************************LSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFA************ASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASEL******************************SVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKAT*******************************MTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPL***************************************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MSSDSDEDELLQMALKEQAQRRVVYDTPQPRKPVTNYVQQPKSAATQKGGRSQGKKYEEEEESEVEMLSISSGDEEVSRDRGLAAKNRARGRRDDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHxxxxxxxxxxxxxxxxxxxxxLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1084 2.2.26 [Sep-21-2011]
Q8S3U91090 Exocyst complex component yes no 0.975 0.969 0.671 0.0
Q96KP1924 Exocyst complex component yes no 0.644 0.756 0.233 5e-34
O54921924 Exocyst complex component yes no 0.646 0.758 0.235 9e-34
Q9D4H1924 Exocyst complex component yes no 0.642 0.753 0.236 2e-32
Q54VX5 1095 Exocyst complex component yes no 0.211 0.209 0.280 2e-28
Q22706884 Exocyst complex component yes no 0.255 0.313 0.212 4e-17
Q9VQQ9894 Exocyst complex component yes no 0.244 0.296 0.233 9e-12
Q4V9Y0760 Vacuolar protein sorting- no no 0.178 0.255 0.24 5e-10
P89102971 Exocyst complex component yes no 0.242 0.270 0.212 2e-08
Q155U0827 Vacuolar protein sorting- no no 0.218 0.286 0.203 8e-08
>sp|Q8S3U9|EXOC2_ARATH Exocyst complex component 2 OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1 Back     alignment and function desciption
 Score = 1507 bits (3902), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 750/1117 (67%), Positives = 885/1117 (79%), Gaps = 60/1117 (5%)

Query: 1    MSSDS---DEDELLQMALKEQAQRRVVYDTP---QPRKPVTNYVQQPKSAATQKGGRS-- 52
            MSSDS   DEDELLQMALKEQA+R + Y  P     RKPV N VQQP+         +  
Sbjct: 1    MSSDSNDLDEDELLQMALKEQAKRDLTYQKPPSSSARKPVANLVQQPRQQKPVAAAAAPP 60

Query: 53   -------QGKKYEEEEESEVEMLSISSGDEEVSRDRGLA-------------AKNRARGR 92
                   +    +E+EESEVE+LSISSGD+++ R+R +               + + R R
Sbjct: 61   KKSAAAVRKPSMDEDEESEVELLSISSGDDDLEREREIGGSSGGAGRGRGSDVREKGRAR 120

Query: 93   RDDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQS 152
            ++DDG WDG EP+CWKRV+EAELARRVR+MRE+RTAPV QK E K          ++LQS
Sbjct: 121  KEDDGAWDGGEPDCWKRVNEAELARRVRDMRESRTAPVVQKVEGKAPAPGKKVALTSLQS 180

Query: 153  FPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFL 212
             PRGMECIDPL LGIIDNKTLRLIT+SSGS  K+++  VDN+LREKL+YFSD F+ KLFL
Sbjct: 181  LPRGMECIDPLKLGIIDNKTLRLITESSGSPSKAEK--VDNTLREKLVYFSDHFDPKLFL 238

Query: 213  SRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEE 272
            SR+HQ+T++ADLEAGAL LK+DLKGR  QRKQLVKDNFDCFVSCKTTIDDIESKLKRIEE
Sbjct: 239  SRIHQDTTAADLEAGALGLKSDLKGRNLQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEE 298

Query: 273  DPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRG 332
            DPEGSGT HLF  M+ V+S+AN AFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPS IR 
Sbjct: 299  DPEGSGTTHLFNCMKSVTSRANLAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSIIRS 358

Query: 333  SISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTN 392
            SISKGE+DLAVREYKKAKSIALPSHVNILKRVLEEVEKVM EFK  LYKSMEDP ID T+
Sbjct: 359  SISKGEYDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMLEFKGTLYKSMEDPKIDFTS 418

Query: 393  LENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDAR 452
            LENTVRLLLELEPESDPVWHYLNVQNHRI GL EKCT DHEAR+E L N+ HE+A+SDA+
Sbjct: 419  LENTVRLLLELEPESDPVWHYLNVQNHRIHGLLEKCTYDHEARVEILRNDTHEKAISDAK 478

Query: 453  WLQIQQDLNQSSGADYSVTC----GNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHH 508
            W QIQQ+     G  YS T      N   +D   VE   EE+D  +GRYI+RLTAVL+HH
Sbjct: 479  WQQIQQN-----GVSYSDTASSNENNAVQVDLQSVEFPSEEIDILKGRYIKRLTAVLVHH 533

Query: 509  IPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTI 568
            IP FWK A+S+FSGKFAKSSQV+     + S NKAEEKV E +YS HSL+EVAGMIR TI
Sbjct: 534  IPVFWKTAISIFSGKFAKSSQVT-----DTSANKAEEKVTEARYSTHSLEEVAGMIRKTI 588

Query: 569  SVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEIT 628
            SVYE KV++TF D ++S ILR +M DAI E+SKACQAFEAKES P  AV+ LR +QAEIT
Sbjct: 589  SVYEAKVNSTFCDFDESCILRPFMSDAINEVSKACQAFEAKESTPHSAVVALRKIQAEIT 648

Query: 629  KIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLM 688
            KIYI RLCSWM+ ST+GISK+ETWIPVSILERN+SPY ISYLPLAFRS++ S M+Q++LM
Sbjct: 649  KIYIQRLCSWMRASTEGISKEETWIPVSILERNRSPYAISYLPLAFRSVIVSGMEQVNLM 708

Query: 689  IHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQ 748
            I S++SEA KSEDM+AQ+ EI  SVRL+FLN FLDFA HLE I ++L+Q+ S ++  + +
Sbjct: 709  ILSVKSEAAKSEDMFAQIEEIIISVRLAFLNCFLDFAAHLEQIGADLSQSTSRQD--NWK 766

Query: 749  NGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQ 808
            NGYS +   E  ++  GSV+DPH+RLL+V+SNIGYCKDEL+SELYNK+K  WLQSR+K++
Sbjct: 767  NGYSDEHQEEPSANTYGSVIDPHRRLLMVLSNIGYCKDELASELYNKFKYTWLQSRDKNE 826

Query: 809  EGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAV 868
            + +D+QDL+MSFSGL EKVLE YTFAKANLIRTAAT +LLDSG+QWG+AP VKG+RD AV
Sbjct: 827  DSSDLQDLIMSFSGLGEKVLEHYTFAKANLIRTAATNYLLDSGIQWGSAPQVKGIRDAAV 886

Query: 869  ELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLM 928
            ELLHTLVAVHAEVFAGAKPLLDK LG+L+EGLIDTFLS+ +EN+S++L+S+DANGFCQLM
Sbjct: 887  ELLHTLVAVHAEVFAGAKPLLDKILGVLIEGLIDTFLSVVEENRSSDLRSIDANGFCQLM 946

Query: 929  LELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALAD 988
             EL+YFET+L  YFT  A ESLK+LQG +LE A  S++EAVE PGH+RRPTRGSED ++D
Sbjct: 947  FELEYFETVLYSYFTSAATESLKSLQGTVLEIAIESISEAVETPGHNRRPTRGSEDTVSD 1006

Query: 989  ERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAY-GFR 1047
            ++Q   +VS DDL+AL +Q S+ELLQ ELERTR+NTACF ES PL+S P   K  Y  FR
Sbjct: 1007 DKQ---SVSADDLLALTKQCSNELLQQELERTRVNTACFAESAPLESTPPLPKATYSSFR 1063

Query: 1048 GSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR 1084
            GS          MDSPSRNYR +Q +GSP  AR RRR
Sbjct: 1064 GS----------MDSPSRNYRGSQSSGSPINARPRRR 1090
Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|Q96KP1|EXOC2_HUMAN Exocyst complex component 2 OS=Homo sapiens GN=EXOC2 PE=1 SV=1 Back     alignment and function description
>sp|O54921|EXOC2_RAT Exocyst complex component 2 OS=Rattus norvegicus GN=Exoc2 PE=1 SV=1 Back     alignment and function description
>sp|Q9D4H1|EXOC2_MOUSE Exocyst complex component 2 OS=Mus musculus GN=Exoc2 PE=1 SV=1 Back     alignment and function description
>sp|Q54VX5|EXOC2_DICDI Exocyst complex component 2 OS=Dictyostelium discoideum GN=exoc2 PE=3 SV=1 Back     alignment and function description
>sp|Q22706|EXOC2_CAEEL Exocyst complex component 2 OS=Caenorhabditis elegans GN=sec-5 PE=3 SV=1 Back     alignment and function description
>sp|Q9VQQ9|EXOC2_DROME Exocyst complex component 2 OS=Drosophila melanogaster GN=sec5 PE=2 SV=1 Back     alignment and function description
>sp|Q4V9Y0|VPS51_XENTR Vacuolar protein sorting-associated protein 51 homolog OS=Xenopus tropicalis GN=vps51 PE=2 SV=1 Back     alignment and function description
>sp|P89102|SEC5_YEAST Exocyst complex component SEC5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC5 PE=1 SV=1 Back     alignment and function description
>sp|Q155U0|VPS51_DANRE Vacuolar protein sorting-associated protein 51 homolog OS=Danio rerio GN=vps51 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1084
2240667011101 predicted protein [Populus trichocarpa] 0.996 0.980 0.793 0.0
2555833441094 Exocyst complex component, putative [Ric 0.965 0.957 0.783 0.0
2960811711096 unnamed protein product [Vitis vinifera] 0.986 0.975 0.750 0.0
3594931091095 PREDICTED: LOW QUALITY PROTEIN: exocyst 0.970 0.960 0.755 0.0
3565357131085 PREDICTED: exocyst complex component 2-l 0.986 0.985 0.707 0.0
4494438341089 PREDICTED: exocyst complex component 2-l 0.973 0.968 0.718 0.0
3565761431087 PREDICTED: exocyst complex component 2-l 0.986 0.983 0.709 0.0
2978395531089 hypothetical protein ARALYDRAFT_476843 [ 0.977 0.973 0.677 0.0
223306751090 exocyst complex component 2 [Arabidopsis 0.975 0.969 0.671 0.0
123222271085 unknown protein [Arabidopsis thaliana] 0.970 0.969 0.666 0.0
>gi|224066701|ref|XP_002302182.1| predicted protein [Populus trichocarpa] gi|222843908|gb|EEE81455.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1717 bits (4447), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 877/1105 (79%), Positives = 968/1105 (87%), Gaps = 25/1105 (2%)

Query: 1    MSSDSD-EDELLQMALKEQAQRRVVYDTP--QPRKPVTNYVQQPKSA------ATQKGGR 51
            MSSDSD EDELLQMALKEQ+QR + Y  P    RKPV N+VQQP+        A  K   
Sbjct: 1    MSSDSDDEDELLQMALKEQSQRDLNYQRPPSNQRKPVVNFVQQPRQPPPPQRPAPTKNMA 60

Query: 52   SQGKK---YEEEEESEVEMLSISSGDEEVSRDRGLAAKNRARGRRDDDGT-------WDG 101
            +Q K     E++++SEVEMLSISSGDEEVS+DRG      ARGR             WDG
Sbjct: 61   NQTKSRIAVEDDDDSEVEMLSISSGDEEVSKDRGGGGGAAARGRGGRGAGGREEERGWDG 120

Query: 102  DEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECID 161
            +EP+CWKRVDEAELARRVR+MRE+RTAPVAQK+E+KPS A   KG +TLQSFPRGMECID
Sbjct: 121  EEPDCWKRVDEAELARRVRDMRESRTAPVAQKFERKPS-ALARKGLNTLQSFPRGMECID 179

Query: 162  PLGLGIIDNKTLRLITDSSGSTPKS-DRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTS 220
            PLGLGIIDNK+LRLITDSS S+P   DRD++DN LREKL+YFS++F+AKLFLSR+HQ+TS
Sbjct: 180  PLGLGIIDNKSLRLITDSSESSPSKSDRDHLDNILREKLLYFSENFDAKLFLSRIHQDTS 239

Query: 221  SADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTA 280
            +A+LEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKL+RIEEDPEGSGT+
Sbjct: 240  AAELEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLRRIEEDPEGSGTS 299

Query: 281  HLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFD 340
            HL+  MQGVSS ANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSI KGE+D
Sbjct: 300  HLYNCMQGVSSLANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSIGKGEYD 359

Query: 341  LAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLL 400
            LAVREYKKAKSIALPSHVNILKRVLEEVEKVM EFK  LYKSMEDP IDLTNLENTVRLL
Sbjct: 360  LAVREYKKAKSIALPSHVNILKRVLEEVEKVMNEFKGTLYKSMEDPQIDLTNLENTVRLL 419

Query: 401  LELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDL 460
            LELEPESDPVWHYLNVQNHRIRGL EKCTLDHEARMETLHNE+ ERA+SDA+W QIQQ+L
Sbjct: 420  LELEPESDPVWHYLNVQNHRIRGLLEKCTLDHEARMETLHNEMRERALSDAKWRQIQQNL 479

Query: 461  NQSSGADYSVTCGNIQP-IDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSV 519
            NQSS  D+S+  GNI P +DS PV+LSGEEVDA RG+YIRRLTAVL HHIPAFWKVALSV
Sbjct: 480  NQSSDVDHSLMMGNIPPPVDSQPVDLSGEEVDALRGKYIRRLTAVLTHHIPAFWKVALSV 539

Query: 520  FSGKFAKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTF 579
            FSGKFAKSSQVS+ESN+NAS  K+EEKVG+G+YS HSLDEVAGMIR TIS YE KVHNTF
Sbjct: 540  FSGKFAKSSQVSAESNVNASATKSEEKVGDGRYSAHSLDEVAGMIRGTISAYETKVHNTF 599

Query: 580  NDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWM 639
            +DLE+SNIL+SYM DAI+EISKACQAFE KESAPP AVM LRTLQAEITKIYI RLCSWM
Sbjct: 600  HDLEESNILQSYMSDAIKEISKACQAFEVKESAPPTAVMALRTLQAEITKIYIIRLCSWM 659

Query: 640  QGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKS 699
            +  T+ ISK+ETWIPVSILERNKSPYTIS+LPLAFRS++ S+MDQIS MI SLRSEA +S
Sbjct: 660  RAMTEEISKEETWIPVSILERNKSPYTISFLPLAFRSVIASAMDQISQMIQSLRSEAGRS 719

Query: 700  EDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTES 759
            EDM+A L EIQESVRL+FLN FLDFAGHLE I SELAQNKS+KES HLQNGYS +   + 
Sbjct: 720  EDMFALLQEIQESVRLAFLNCFLDFAGHLEQIGSELAQNKSSKESLHLQNGYSHESEEKL 779

Query: 760  LSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMS 819
             S++ GSVVD HQ+LL+V+SNIG+CKDELS EL+NKYK IWLQSREKD+EG+DIQDLVMS
Sbjct: 780  SSNLQGSVVDSHQQLLLVLSNIGFCKDELSYELFNKYKTIWLQSREKDEEGSDIQDLVMS 839

Query: 820  FSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHA 879
            FSGLEEKVL QYTFAKANLIRTAA  +LL+SGVQWGAAPAVKGVRD AVELLHTLVAVH+
Sbjct: 840  FSGLEEKVLAQYTFAKANLIRTAAMNYLLNSGVQWGAAPAVKGVRDAAVELLHTLVAVHS 899

Query: 880  EVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILN 939
            EVFAGAKPLLDKTLGILVEGLIDTFLSLF EN+S +L+SLDANGFCQLMLEL+YFETILN
Sbjct: 900  EVFAGAKPLLDKTLGILVEGLIDTFLSLFHENKSKDLRSLDANGFCQLMLELEYFETILN 959

Query: 940  PYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPD 999
            PY T DARESLK+LQGVLLEKAT +V EAVENPGH RRPTRGSEDALAD+R QGM VSPD
Sbjct: 960  PYLTPDARESLKSLQGVLLEKATENVTEAVENPGHQRRPTRGSEDALADDRLQGMAVSPD 1019

Query: 1000 DLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPA 1059
            DLIALA+Q SSELLQ+ELERTRINTACF+ES+PLDSVPESAK AY +RGSMD S R+Y  
Sbjct: 1020 DLIALAEQCSSELLQSELERTRINTACFIESIPLDSVPESAKAAYAYRGSMD-SPRSY-- 1076

Query: 1060 MDSPSRNYRNAQPTGSPSFARHRRR 1084
            MDSP RNYR +Q  GSP F+RHRRR
Sbjct: 1077 MDSPGRNYRGSQAMGSPGFSRHRRR 1101

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255583344|ref|XP_002532433.1| Exocyst complex component, putative [Ricinus communis] gi|223527853|gb|EEF29948.1| Exocyst complex component, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296081171|emb|CBI18197.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493109|ref|XP_002269025.2| PREDICTED: LOW QUALITY PROTEIN: exocyst complex component 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535713|ref|XP_003536388.1| PREDICTED: exocyst complex component 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449443834|ref|XP_004139681.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] gi|449503239|ref|XP_004161903.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356576143|ref|XP_003556193.1| PREDICTED: exocyst complex component 2-like [Glycine max] Back     alignment and taxonomy information
>gi|297839553|ref|XP_002887658.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] gi|297333499|gb|EFH63917.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|22330675|ref|NP_177811.2| exocyst complex component 2 [Arabidopsis thaliana] gi|24638217|sp|Q8S3U9.1|EXOC2_ARATH RecName: Full=Exocyst complex component 2; AltName: Full=Exocyst complex component Sec5 gi|19387170|gb|AAL87121.1|AF479278_1 SEC5a [Arabidopsis thaliana] gi|26452107|dbj|BAC43143.1| unknown protein [Arabidopsis thaliana] gi|29029068|gb|AAO64913.1| At1g76850 [Arabidopsis thaliana] gi|332197774|gb|AEE35895.1| exocyst complex component 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|12322227|gb|AAG51148.1|AC079283_5 unknown protein [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1084
TAIR|locus:20300561090 SEC5A "AT1G76850" [Arabidopsis 0.971 0.966 0.651 0.0
TAIR|locus:21995521090 SEC5B "AT1G21170" [Arabidopsis 0.895 0.890 0.695 0.0
RGD|619961924 Exoc2 "exocyst complex compone 0.318 0.373 0.257 1.7e-35
UNIPROTKB|O54921924 Exoc2 "Exocyst complex compone 0.318 0.373 0.257 1.7e-35
MGI|MGI:1913732924 Exoc2 "exocyst complex compone 0.318 0.373 0.257 3.6e-35
UNIPROTKB|F1P2A7925 EXOC2 "Uncharacterized protein 0.469 0.550 0.227 7.4e-35
UNIPROTKB|Q96KP1924 EXOC2 "Exocyst complex compone 0.397 0.466 0.246 2e-34
UNIPROTKB|E1BDW9924 EXOC2 "Uncharacterized protein 0.307 0.360 0.257 4.1e-33
UNIPROTKB|F1RXP8924 EXOC2 "Uncharacterized protein 0.307 0.360 0.266 7.6e-33
UNIPROTKB|E2RCW3924 EXOC2 "Uncharacterized protein 0.401 0.470 0.241 2.3e-32
TAIR|locus:2030056 SEC5A "AT1G76850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3476 (1228.7 bits), Expect = 0., Sum P(2) = 0.
 Identities = 709/1089 (65%), Positives = 841/1089 (77%)

Query:     1 MSSDSDEDELLQMALKEQAQRRVVYDTPQPR--KPVTNYVQQPK--SAATQKGGRSQGKK 56
             +   +  D   Q      A++ V     QPR  KPV      PK  +AA +K    + ++
Sbjct:    18 LKEQAKRDLTYQKPPSSSARKPVANLVQQPRQQKPVAAAAAPPKKSAAAVRKPSMDEDEE 77

Query:    57 YXXXXXXXXXXXXXXXGDEEVS-------RDRGLAAKNRAXXXXXXXXXXXXXEPNCWKR 109
                              + E+        R RG   + +              EP+CWKR
Sbjct:    78 SEVELLSISSGDDDLEREREIGGSSGGAGRGRGSDVREKGRARKEDDGAWDGGEPDCWKR 137

Query:   110 VDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIK-GFSTLQSFPRGMECIDPLGLGII 168
             V+EAELARRVR+MRE+RTAPV QK E K + A G K   ++LQS PRGMECIDPL LGII
Sbjct:   138 VNEAELARRVRDMRESRTAPVVQKVEGK-APAPGKKVALTSLQSLPRGMECIDPLKLGII 196

Query:   169 DNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGA 228
             DNKTLRLIT+SSGS  K+++  VDN+LREKL+YFSD F+ KLFLSR+HQ+T++ADLEAGA
Sbjct:   197 DNKTLRLITESSGSPSKAEK--VDNTLREKLVYFSDHFDPKLFLSRIHQDTTAADLEAGA 254

Query:   229 LALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQG 288
             L LK+DLKGR  QRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGT HLF  M+ 
Sbjct:   255 LGLKSDLKGRNLQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTTHLFNCMKS 314

Query:   289 VSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKK 348
             V+S+AN AFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPS IR SISKGE+DLAVREYKK
Sbjct:   315 VTSRANLAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSIIRSSISKGEYDLAVREYKK 374

Query:   349 AKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESD 408
             AKSIALPSHVNILKRVLEEVEKVM EFK  LYKSMEDP ID T+LENTVRLLLELEPESD
Sbjct:   375 AKSIALPSHVNILKRVLEEVEKVMLEFKGTLYKSMEDPKIDFTSLENTVRLLLELEPESD 434

Query:   409 PVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADY 468
             PVWHYLNVQNHRI GL EKCT DHEAR+E L N+ HE+A+SDA+W QIQQ+     G  Y
Sbjct:   435 PVWHYLNVQNHRIHGLLEKCTYDHEARVEILRNDTHEKAISDAKWQQIQQN-----GVSY 489

Query:   469 SVTCG----NIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKF 524
             S T      N   +D   VE   EE+D  +GRYI+RLTAVL+HHIP FWK A+S+FSGKF
Sbjct:   490 SDTASSNENNAVQVDLQSVEFPSEEIDILKGRYIKRLTAVLVHHIPVFWKTAISIFSGKF 549

Query:   525 AKSSQVSSESNLNASGNKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLED 584
             AKSSQV+     + S NKAEEKV E +YS HSL+EVAGMIR TISVYE KV++TF D ++
Sbjct:   550 AKSSQVT-----DTSANKAEEKVTEARYSTHSLEEVAGMIRKTISVYEAKVNSTFCDFDE 604

Query:   585 SNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTD 644
             S ILR +M DAI E+SKACQAFEAKES P  AV+ LR +QAEITKIYI RLCSWM+ ST+
Sbjct:   605 SCILRPFMSDAINEVSKACQAFEAKESTPHSAVVALRKIQAEITKIYIQRLCSWMRASTE 664

Query:   645 GISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYA 704
             GISK+ETWIPVSILERN+SPY ISYLPLAFRS++ S M+Q++LMI S++SEA KSEDM+A
Sbjct:   665 GISKEETWIPVSILERNRSPYAISYLPLAFRSVIVSGMEQVNLMILSVKSEAAKSEDMFA 724

Query:   705 QLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIP 764
             Q+ EI  SVRL+FLN FLDFA HLE I ++L+Q+ S +++   +NGYS +   E  ++  
Sbjct:   725 QIEEIIISVRLAFLNCFLDFAAHLEQIGADLSQSTSRQDNW--KNGYSDEHQEEPSANTY 782

Query:   765 GSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLE 824
             GSV+DPH+RLL+V+SNIGYCKDEL+SELYNK+K  WLQSR+K+++ +D+QDL+MSFSGL 
Sbjct:   783 GSVIDPHRRLLMVLSNIGYCKDELASELYNKFKYTWLQSRDKNEDSSDLQDLIMSFSGLG 842

Query:   825 EKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAG 884
             EKVLE YTFAKANLIRTAAT +LLDSG+QWG+AP VKG+RD AVELLHTLVAVHAEVFAG
Sbjct:   843 EKVLEHYTFAKANLIRTAATNYLLDSGIQWGSAPQVKGIRDAAVELLHTLVAVHAEVFAG 902

Query:   885 AKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTH 944
             AKPLLDK LG+L+EGLIDTFLS+ +EN+S++L+S+DANGFCQLM EL+YFET+L  YFT 
Sbjct:   903 AKPLLDKILGVLIEGLIDTFLSVVEENRSSDLRSIDANGFCQLMFELEYFETVLYSYFTS 962

Query:   945 DARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIAL 1004
              A ESLK+LQG +LE A  S++EAVE PGH+RRPTRGSED ++D++Q   +VS DDL+AL
Sbjct:   963 AATESLKSLQGTVLEIAIESISEAVETPGHNRRPTRGSEDTVSDDKQ---SVSADDLLAL 1019

Query:  1005 AQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYG-FRGSMDPSGRNYPAMDSP 1063
              +Q S+ELLQ ELERTR+NTACF ES PL+S P   K  Y  FRGSMD   RNY    S 
Sbjct:  1020 TKQCSNELLQQELERTRVNTACFAESAPLESTPPLPKATYSSFRGSMDSPSRNYRGSQS- 1078

Query:  1064 SRNYRNAQP 1072
             S +  NA+P
Sbjct:  1079 SGSPINARP 1087
GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0009846 "pollen germination" evidence=IGI
GO:0009860 "pollen tube growth" evidence=IGI
GO:0009506 "plasmodesma" evidence=IDA
GO:0007155 "cell adhesion" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2199552 SEC5B "AT1G21170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|619961 Exoc2 "exocyst complex component 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O54921 Exoc2 "Exocyst complex component 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:1913732 Exoc2 "exocyst complex component 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2A7 EXOC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
UNIPROTKB|Q96KP1 EXOC2 "Exocyst complex component 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|E1BDW9 EXOC2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RXP8 EXOC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|E2RCW3 EXOC2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8S3U9EXOC2_ARATHNo assigned EC number0.67140.97500.9697yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_II000319
hypothetical protein (1101 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1084
KOG2347934 consensus Sec5 subunit of exocyst complex [Intrace 100.0
PF15469182 Sec5: Exocyst complex component Sec5 100.0
KOG2346636 consensus Uncharacterized conserved protein [Funct 100.0
PF04124338 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 99.49
KOG2069581 consensus Golgi transport complex subunit [Intrace 99.07
PF0870087 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te 98.82
KOG2033863 consensus Low density lipoprotein B-like protein [ 98.67
PF10475291 DUF2450: Protein of unknown function N-terminal do 98.18
KOG2176800 consensus Exocyst complex, subunit SEC15 [Intracel 97.97
PF04100383 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 97.81
PF06248593 Zw10: Centromere/kinetochore Zw10; InterPro: IPR00 97.61
PF04091311 Sec15: Exocyst complex subunit Sec15-like ; InterP 97.22
KOG2307705 consensus Low density lipoprotein receptor [Intrac 97.2
PF10392132 COG5: Golgi transport complex subunit 5; InterPro: 97.16
PF06148133 COG2: COG (conserved oligomeric Golgi) complex com 96.35
PF04048142 Sec8_exocyst: Sec8 exocyst complex component speci 95.78
KOG3691982 consensus Exocyst complex subunit Sec8 [Intracellu 95.53
PF10191766 COG7: Golgi complex component 7 (COG7); InterPro: 95.37
KOG2180793 consensus Late Golgi protein sorting complex, subu 95.06
PF04437494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 93.58
PF06046566 Sec6: Exocyst complex component Sec6; InterPro: IP 90.82
>KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=2.3e-129  Score=1141.19  Aligned_cols=902  Identities=44%  Similarity=0.629  Sum_probs=749.4

Q ss_pred             CCCCCcccccCCCCCcccC-------CCCCCCCCCcccccccceeeecccCCccccchh---------hhhhh-cccCCc
Q 001404           30 PRKPVTNYVQQPKSAATQK-------GGRSQGKKYEEEEESEVEMLSISSGDEEVSRDR---------GLAAK-NRARGR   92 (1084)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~   92 (1084)
                      .++||.+++|||++....+       +..-+++.+. +|+|+|++|+|+++||+.++.+         +++++ .+|+++
T Consensus         2 ~~np~~~~~q~p~vtg~s~~e~~p~t~~~ir~e~l~-~~~sd~~~l~i~g~D~lls~~~~s~~~~~~~~g~a~~~~G~~r   80 (934)
T KOG2347|consen    2 TRNPVARLAQQPRVTGLSPNEGGPGTAVTIRKEFLG-NDESDVIGLSICGGDELLSAERKSPNGIIARVGLAKREKGDIR   80 (934)
T ss_pred             CCCchhhccCCccccCCCCCCCCCCcceeecCCccC-cchhhHhhhhhcccchhhhhhcCCCCccccccccccCCCCceE
Confidence            4789999999998873222       2244556677 9999999999999999877664         23233 278888


Q ss_pred             cCCCCCCCCCCCCccccccHHHHHHHHHHhhhccCcccccccccccchhhcc-cccccccccCCCCCCCCCCCCCc-cch
Q 001404           93 RDDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGI-KGFSTLQSFPRGMECIDPLGLGI-IDN  170 (1084)
Q Consensus        93 ~~~~~~~~~~~p~~w~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~DPLGl~~-~~~  170 (1084)
                      ..++..|+|-.|.+|.+|..+++.  +++|+..+.+|  ++++.++. ...+ ++...+|..|+++...+|+-..+ ++.
T Consensus        81 ~~~~~~~~g~s~~~f~r~~~~qi~--~l~~s~~~~d~--~~~~~~~~-~~~~~~~~t~l~~~~~l~~~i~~~k~~~~~d~  155 (934)
T KOG2347|consen   81 VTTLSGGKGTSTVCFRRVNHEQIG--PLDESAVRVDE--QQDQRKVP-GRLKGVALTSLQSEPPLGECIEPLKLKINEDN  155 (934)
T ss_pred             EeeccCccccCchhhhhhhHhhhc--cchhhhhhccc--cccccccc-ccccccCCcccccCCCcccccCchhhcchhhh
Confidence            899999999999999999999998  99999999888  66666544 3322 37777777777777777776544 333


Q ss_pred             hhhhhhcccCCCCCCCCCCCCCchhhcccCCCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 001404          171 KTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNF  250 (1084)
Q Consensus       171 ~~L~~~~~~~~~~P~~~~~~~~p~lr~~~disS~~FdP~~FLs~vH~~tS~~dL~~gl~~L~reI~~~~~~LK~LV~eNF  250 (1084)
                      +                  .++|..  .+||.+++|+|+|||.++|+++||+||+.|...|++..+..++.-+.||++||
T Consensus       156 ~------------------~lfp~~--~~Dl~se~Fspkw~L~enH~~ts~edLk~~i~~lK~~~n~~~~~~~~lvK~n~  215 (934)
T KOG2347|consen  156 K------------------TLFPIT--SVDLRSEHFSPKWFLLENHQDTSFEDLKAGILNLKRDLNGRKEGSLQLVKDNF  215 (934)
T ss_pred             h------------------hhcccc--ccccccccCChhHHHHhhhhhccHHHHHHHHHHHHHhhcchhhhhHHHHhcch
Confidence            3                  344544  57899999999999999999999999999999999999999999999999999


Q ss_pred             hhhHhhhhhHHHHHHHhhhhcCCCCCCCchhHHhhHHHHHHHHHhhhhhHHHhHHHHHHHHHHHHHHHHHHHHhcCchhh
Q 001404          251 DCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTI  330 (1084)
Q Consensus       251 ~kFI~akdTId~m~~~mk~~e~~~~~~~t~~L~~~L~~i~~~a~~i~~pLlerr~KadkLr~vl~~L~R~kfLFeLP~~L  330 (1084)
                      +.||.|++|+++|+.++++.+.+..+++|.+|.+.|+++.+.|+.+|.+|++|++|||++|+++++|+||+|||+||+++
T Consensus       216 ~~fi~~~dtl~~i~~kLe~~e~~~~gs~t~~l~n~i~~~~s~ad~iF~~vl~Rk~~ADstRsvL~~lqRfkfLFnLp~~i  295 (934)
T KOG2347|consen  216 DSFISCKDTLDNIHQKLERGEEDPHGSGTTKLENCIKNSTSRADLIFEDVLERKDKADSTRSVLGVLQRFKFLFNLPSNI  295 (934)
T ss_pred             hHHHHHHHHHHHHHHHHhccccCccchHHHHHHHHHHHhhhHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcchhh
Confidence            99999999999999999998888899999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhcCChHHHHHHHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHhcCCCCCChH
Q 001404          331 RGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPV  410 (1084)
Q Consensus       331 ~~~I~~gdYd~aV~dY~kAk~L~~~~~v~vf~kV~~EVE~ii~~~r~~L~~kL~~~~~s~ee~~~lI~lLleL~~~~dPi  410 (1084)
                      +++|++|+|+.+|++|+|||+++.+++|++|+++++|||..|+.||..|+++|.+++.+.++++++|++|.+|++++||+
T Consensus       296 er~i~kGeYd~vvndYekAKsl~~~t~v~~Fkk~l~Eve~~m~~~k~~l~~kli~~p~t~~dq~~~ir~L~~L~~~~dP~  375 (934)
T KOG2347|consen  296 ERSIKKGEYDTVVNDYEKAKSLFGKTEVNLFKKVLEEVEKRMQSFKETLYRKLIDTPITFEDQSKLIRYLSELEPESDPV  375 (934)
T ss_pred             hhHhhcCCceeeccchhhHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhCcccCch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhHHHHHHHhhhccCcCcccccccCCCCCCCCCCCCCChhhH
Q 001404          411 WHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEV  490 (1084)
Q Consensus       411 w~fL~sq~~~I~~~le~~~~~~~~~~e~l~~rl~~~~~s~~~~~~lq~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ev  490 (1084)
                      |+||..|++||...++.|...|+++++.++  +     ++ +|.+.+++....+.-++.+..+.-+   . ....++.+.
T Consensus       376 wq~I~~q~k~i~~L~~s~~~~~~~~l~~~~--~-----~~-~~~q~s~~g~~~S~t~s~~~~~~~q---~-~~~~~~~~k  443 (934)
T KOG2347|consen  376 WQCIGVQNKRILGLLESCWDDHVARLEGLR--L-----SD-KWTQPSQNGVHLSDTASSMENSQNQ---V-INEWKIREK  443 (934)
T ss_pred             hhhccccchHHHhhhhhcchhHHHHhhccc--c-----cc-cccchhhcccccCchHHHHhhhhhh---h-ccchhhhhh
Confidence            999999999999999999999999999886  1     33 6665555543211111122222111   0 112344455


Q ss_pred             HHHHHHHHHHHHHHHHhcchhHHHHHHHhhcC-cccccccCCccccccccCchhhhh--hccCccccccHHHHHHHHHHH
Q 001404          491 DAFRGRYIRRLTAVLIHHIPAFWKVALSVFSG-KFAKSSQVSSESNLNASGNKAEEK--VGEGKYSIHSLDEVAGMIRNT  567 (1084)
Q Consensus       491 ~~l~~~fv~~L~~vll~~lp~FWklaqs~~~G-k~~k~~~~~~~~~s~ss~~~~~~~--l~~~k~~~h~~~e~~~mi~e~  567 (1084)
                      ...+++||++||+++++++|.|||+|++|++| +|....+..     .+..++.+..  +....+..|++.++..|.+-.
T Consensus       444 ~~~r~~fiekL~~l~~s~lP~fWKl~~sy~~G~~~~~~sq~~-----~s~~~k~~qn~~~~~~~~v~~sLv~~~~~~~~t  518 (934)
T KOG2347|consen  444 TPERVNFIEKLTDLLLSQLPIFWKLAISYFNGDLFSPSSQVQ-----DSDINKMEQNNEVREKREVFHSLVELALMDRFT  518 (934)
T ss_pred             chHHHHHHHHHHHHHHHhCcHHHHHHHHHhcccccCcccccC-----hhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence            56788999999999999999999999999999 555444333     1222222212  122346678888888888888


Q ss_pred             HHHhhhhhhhcccCCccCccchHHHHHHHHHHHHHHHhhhhccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q 001404          568 ISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGIS  647 (1084)
Q Consensus       568 i~~y~~~v~~~F~~l~~~n~~~~yL~~~l~~v~~~~~~L~~~~~~P~~~~~~Lr~L~~~~~~~~v~~lca~~~~dae~i~  647 (1084)
                      ++.|..+...-|-+.|......|||+++++.|+.+|++|+.++.+|+++++-|+.|+.+   .+++|+|+|++..+|.|+
T Consensus       519 ~s~~~~~a~~~~~~~dis~~~~~~~~~~i~~vr~~~~sL~ale~~P~~~lq~Iq~li~~---~rl~~~~~~~~~~~e~is  595 (934)
T KOG2347|consen  519 LSQSDGKAKSPFGDADISRSLLPWMPLAIKTVRKACQSLEALESLPHDALQPIQKLITE---ARLQCLSSWMRASTERIS  595 (934)
T ss_pred             hhhhcccccCCcCCcccccccCccchhHHHHhHHHHHHHHHhhhChHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Confidence            88888887766666654444449999999999999999999977998888888888877   788889999999999999


Q ss_pred             ---cccCcccccccccCCCCCCcccchHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHH
Q 001404          648 ---KDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDF  724 (1084)
Q Consensus       648 ---~lEdW~~~~~~e~~~~~~~iT~LP~~Fe~~i~~~mqki~~~~~~~~~E~~~~~dv~~~l~q~~~~Vr~~F~~~~~~f  724 (1084)
                         ..|+|+++.+.+|+   .++|+||.+||++|+++|+.+..++.+..+|....+     ...|+++|...+++...+|
T Consensus       596 ~l~~re~W~~~s~~~rn---~s~t~LP~~fEt~ivssl~q~~~~~l~~~gEa~~f~-----~~~~~~~i~el~I~~~~~f  667 (934)
T KOG2347|consen  596 TLAKRETWIPDSILERN---RSITYLPLAFETVIVSSLEQVNSVLLSFEGEAALFE-----QPDMQAEIEELSISVRLAF  667 (934)
T ss_pred             HHHhhhccccchhhhcc---cchhhhhHHHHHHHhhhHHhhhhHHhhccccccccC-----chHHHHHHHHHHHHHHHHH
Confidence               79999999877886   569999999999999999999999888777766433     2455555555566666666


Q ss_pred             HHhHHHHhhhhhhccCCcccc-----ccccCCCCCCCCCCcCCCCCCCCCcCceeeheecchhHHHHhhHHHHHHHHHhh
Q 001404          725 AGHLEHIASELAQNKSNKESQ-----HLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDI  799 (1084)
Q Consensus       725 ~~~Le~la~~~~~~~~~de~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~RLLltLSN~~~lr~~vip~L~~~fe~~  799 (1084)
                      ..|+|+++.-.++-. -+.+.     -.++++....++.++.+.++.+++|++|||+||||++||+...+|.|.+.|+.-
T Consensus       668 l~c~e~L~~h~~~~~-~~~~q~~t~~~~~~~~~~~~qed~~~ns~~~~~~~~qrlLi~LsN~~yc~~~~~~~l~n~fk~~  746 (934)
T KOG2347|consen  668 LNCFEDLAIHLEQIG-ADLSQLTTQIEGQNGFSNAHQEDISINSADSVVDPEQRLLIVLSNIGYCKDILAPTLLNIFKYT  746 (934)
T ss_pred             HHHHHHhhhcccccC-CchhhcccccccccccccccchhhhcccccccCChhheeEEEeccHHHHHHHHHHHHHHHHHHH
Confidence            666666664111100 01111     014444444444455556677889999999999999999999999999999766


Q ss_pred             cccccccccccccHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHhhhhccCCCCCCCCCCCCccchHHHHHHHHHHHHHH
Q 001404          800 WLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHA  879 (1084)
Q Consensus       800 f~~~~~~~~~~~~ir~~~~~l~qLD~rLfe~Y~~~Ka~~L~~~I~~gil~~gidW~~~p~P~~VRpYvyE~Ll~LV~VHA  879 (1084)
                      |-...+      .+.+..++|++|+.+||+.||+.|+++|++++|||||.+||+|..+|+|++||+|++|+|++||+|||
T Consensus       747 ~~~~~k------~iE~is~s~s~l~s~l~e~Yi~~k~~~i~~alEp~~~~~~~~W~~~~~~~~irdYa~E~l~~lV~Vha  820 (934)
T KOG2347|consen  747 WLLSRK------NIEDISMSLSGLGSKLFENYIEDKADPIRGALEPYLLDGGIQWGMAPPVKGIRDYAKEALHNLVAVHA  820 (934)
T ss_pred             hhcccc------cHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccchhhccccccccCCCccchHHHHHHHHHHHHHHHH
Confidence            655322      34444578999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhccchhhHHHHHHHHHHHHHHHHHHhhhhhcccc-ccccCcchhHHHHhhHHHHHHhhcccCChhHHHHHHHHHHHHH
Q 001404          880 EVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNN-LKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLL  958 (1084)
Q Consensus       880 EV~t~a~~Ll~rVLs~Lve~laeelL~~f~~~~~~~-v~~fs~~G~lQAtLDIefl~qtLs~Y~T~~A~~~~~~~~~~~~  958 (1084)
                      |||++||+|+++||..+|+.++++|+++|+     | |.+|+.+|.+|+++|||||+++|++|+|+.|+..|+|      
T Consensus       821 Evf~iap~Ll~kiL~~~ve~i~d~L~~l~~-----~~v~s~S~nG~lQi~vdl~~l~~~l~~Ylt~~a~~slkq------  889 (934)
T KOG2347|consen  821 EVFAIAPQLLDKILGETVEGISDELLRLFS-----CDVQSFSANGALQIMVDLEYLEDVLGPYLTKDAKESLKQ------  889 (934)
T ss_pred             HHHhcCHHHHHHHHHHHHHHHHHHHHHHhh-----hhhhccCCCcceeeeeeHHHHHHHHHHhccHHHHHHHHH------
Confidence            999999999999999999999999999998     7 9999999999999999999999999999999999995      


Q ss_pred             HHHhhHHHhhhcCCCCCCCCCCCCchhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhcch
Q 001404          959 EKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINT 1024 (1084)
Q Consensus       959 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1024 (1084)
                        |+|.+++.+.+     +++|+.++...+++++         ..|+.||.     .++++||+|+
T Consensus       890 --ale~l~~~~~g-----~dtr~lee~ln~~k~s---------m~l~Lqc~-----~a~~~t~~~t  934 (934)
T KOG2347|consen  890 --ALEALSECLSG-----GDTRRLEECLNDDKQS---------MRLQLQCF-----QALEDTRFNT  934 (934)
T ss_pred             --HHHHhhhhccC-----cchhhHHHHHHHhhHH---------HHHHHHHH-----HHhhhhhcCC
Confidence              88899988888     5999999999999998         67899996     7899999985

>PF15469 Sec5: Exocyst complex component Sec5 Back     alignment and domain information
>KOG2346 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [] Back     alignment and domain information
>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi Back     alignment and domain information
>KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism] Back     alignment and domain information
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known Back     alignment and domain information
>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] Back     alignment and domain information
>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells Back     alignment and domain information
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking Back     alignment and domain information
>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex Back     alignment and domain information
>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis [] Back     alignment and domain information
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1084
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-16
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-08
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 89.1 bits (220), Expect = 5e-18
 Identities = 85/620 (13%), Positives = 184/620 (29%), Gaps = 186/620 (30%)

Query: 3   SDSDEDELLQMALKEQAQRRVVYDTPQPRKPVTNYVQQPKSAATQKGGRSQGKKYEEEEE 62
           S  + D ++          R ++ T          + + +    +         Y+    
Sbjct: 47  SKEEIDHIIMSKDAVSGTLR-LFWT---------LLSKQEEMVQKFVEEVLRINYK---- 92

Query: 63  SEVEMLSISSGDEEVSRDRGLAAKNRARGRRDDDGTWDGDEPNCWKRVDEAELARRVREM 122
                  + S  +   R   +  +     R   D  ++ ++      V       R++  
Sbjct: 93  ------FLMSPIKTEQRQPSMMTRMYIEQR---DRLYNDNQVFAKYNV------SRLQPY 137

Query: 123 RETRTAPVAQKYEKKPSMAA-GIKGF--STL-----------QSFPRGM------ECIDP 162
            + R A    +     ++   G+ G   + +                 +       C  P
Sbjct: 138 LKLRQA--LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP 195

Query: 163 LGLGIIDNKTLRLIT---DSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNT 219
             +  +  K L  I     S      + +  + +S++ +L         +L  S+ ++N 
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI-HSIQAEL--------RRLLKSKPYEN- 245

Query: 220 SSADLEAGALALKTDLKGRTQQRKQLVKDN---------FDCFVSCK---TT-----IDD 262
                    L               LV  N         F+  +SCK   TT      D 
Sbjct: 246 --------CL---------------LVLLNVQNAKAWNAFN--LSCKILLTTRFKQVTDF 280

Query: 263 I-ESKLKRIEEDPEGSG-----TAHLFKLMQGVSSQANRAFEPLFERQAQ---------- 306
           +  +    I  D             L         Q      P   R+            
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD----LP---REVLTTNPRRLSII 333

Query: 307 AEKIRSVQGMLQRFRTLFN--LPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRV 364
           AE IR        ++ +    L + I  S++  E     R+     S+  P   +I   +
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE-YRKMFDRLSV-FPPSAHIPTIL 391

Query: 365 L---------EEVEKVMQEF--KAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHY 413
           L          +V  V+ +    +++ K  ++  I + ++     L L+++ E++   H 
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY----LELKVKLENEYALHR 447

Query: 414 LNVQNHRIRGLFE-----KCTLD---------HEARMETLHN-ELHERAMSDARWLQIQQ 458
             V ++ I   F+        LD         H   +E      L      D R+  ++Q
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF--LEQ 505

Query: 459 DLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIR-------RLTAVLIHHIPA 511
            +   S A       +   +++L      +++  ++  YI        RL   ++  +P 
Sbjct: 506 KIRHDSTA----WNASGSILNTL------QQLKFYK-PYICDNDPKYERLVNAILDFLP- 553

Query: 512 FWKVALSVFSGKFAKSSQVS 531
             K+  ++   K+    +++
Sbjct: 554 --KIEENLICSKYTDLLRIA 571
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1084
d2d2sa1229 Exocyst complex component EXO84 {Baker's yeast (Sa 97.44
>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.44  E-value=0.0013  Score=39.49  Aligned_cols=202  Identities=13%  Similarity=0.142  Sum_probs=137.6

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9999978976395434752103883799999999632106-------764156999999999999999999999614999
Q 001404          315 GMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIAL-------PSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPH  387 (1084)
Q Consensus       315 ~~L~R~kfLFeLP~~L~~~I~~gdYd~aV~dY~kAk~L~~-------~~~v~vf~kV~~EVE~ii~~~k~~L~~kL~~~~  387 (1084)
                      +.-++.+++-++|..|.-||..++|+.|+.-..+++.+..       .........+-..|+...+.+...|-..+... 
T Consensus         4 ~~~~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l~~~-   82 (229)
T d2d2sa1           4 STAQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILSS-   82 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf             0876441372661888999998609999999999999997363456753278999999999999999999999998525-


Q ss_pred             CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             99567999999986179999759899997699999999898998999999976888785321479999986210476765
Q 001404          388 IDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGAD  467 (1084)
Q Consensus       388 ~s~~e~~~lI~lLleL~~~~dPiw~~L~sq~~~I~~~le~~~~~~~~k~e~l~~kl~~~~~s~~~~~~lq~~~~~~~~v~  467 (1084)
                      .+..++.+.|.+|..||..+.-+-.||.++..||...+..+.                               ..     
T Consensus        83 ~~~~~~~~~v~~L~rLg~~~~A~~lfL~~rs~~l~~~i~~~~-------------------------------~~-----  126 (229)
T d2d2sa1          83 NEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIG-------------------------------SV-----  126 (229)
T ss_dssp             SSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC---------------------------------C-----
T ss_pred             CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC-------------------------------CC-----
T ss_conf             883899999999999288369999999999999999998457-------------------------------68-----


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             43335888887789978883567899999999999999710246899877850682145566786666565574123210
Q 001404          468 YSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKSSQVSSESNLNASGNKAEEKV  547 (1084)
Q Consensus       468 ~~l~~~~~~~~~~~~~~~~~~ev~~l~~~fv~~L~~vil~~lp~FWklaqs~~~Gk~~k~~~~~~~~~s~s~~~~~~~~l  547 (1084)
                                 .      +       ...|+.+|+.+.-.++-+-=.--+..|.|.       +      +.        
T Consensus       127 -----------~------~-------~~~Yi~~l~~i~f~~i~~t~~~y~aiF~~~-------~------~~--------  161 (229)
T d2d2sa1         127 -----------D------N-------PTNYLTQLAVIRFQTIKKTVEDFQDIFKEL-------G------AK--------  161 (229)
T ss_dssp             -----------C------S-------HHHHHHHHHHHHHHHHHHHHHHHHHHSTTC-------C------HH--------
T ss_pred             -----------C------C-------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------C------CH--------
T ss_conf             -----------9------8-------999999999999999999999999992899-------9------04--------


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             25755546389999999999997654421002688667412289999999999999862001379
Q 001404          548 GEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESA  612 (1084)
Q Consensus       548 ~~~k~~~h~~~e~~~mi~e~i~~y~~~i~~~F~~l~~~n~~~~yL~~~l~~I~~~~~~L~~~~~~  612 (1084)
                              ....|..|+.+-++.|...+.--... ...     -...|+..+...|..|..+|-.
T Consensus       162 --------~sS~lv~Wa~~ei~~f~~~l~r~l~~-~~~-----~~~~~i~~~~~~c~~L~~vGlD  212 (229)
T d2d2sa1         162 --------ISSILVDWCSDEVDNHFKLIDKQLLN-DEM-----LSPGSIKSSRKQIDGLKAVGLD  212 (229)
T ss_dssp             --------HHHHHHHHHHHHHHHHHHHHHHHTTC---------CCHHHHHHHHHHHHGGGGGTCC
T ss_pred             --------HHHHHHHHHHHHHHHHHHHHHHHCCC-CHH-----HHHHHHHHHHHHHHHHHHCCCC
T ss_conf             --------56599999999999999999998564-226-----8999999999999999873904