Citrus Sinensis ID: 001410

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------1070------1080--
Protein Sequence
MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSLLDDDTFMSVAFE
Secondary Structure (PSIPRED)
ccccccccccccccHHHHHHHHHHHcccHHHHHHHHHcccccccccccccccccccEEEEEcHHHHHHccccccEEEccccccHHHHHHHcccccEEEEEEEEcccccccccEEEEEEccccccccEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHcccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEccccccccccccccEEEEEccccccHHHHccccEEccccccccccccEEEEEcccccccccEEEEEEcccccccccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHcccccccccccccHHHHHHHHHHHcHHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHccccHHHHcccccccccccHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHcccccccccccc
Secondary Structure Prediction (SSPRO)
cccHccccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHccccccccccccccEEEEEccEEEEEEEccccccEEcccccccHHHHHHcccccEEEEEEEEEcccccccccEEHHHHcccccccEEEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHcHcccccccccccccccccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEccccccccccccccEEEEEcccEccHEEEcccEEEEEccccccccEEEEEEEcccEEEEEEEEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHccccccccccccHHHHEHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHcccccccccccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcHHccccHHcccccccHHHHHHHHccccccccccc
Coil and Loop (DISEMBL)
madrgsyalaprldMQQLQMEAQHRWLRPAEICEILCNYQkfhiaseppsrppsgslflfdRKVLRYFRkdghnwrkkkdgktvREAHEKLKVGSVDVLHCYYahgednenFQRRCYWMLEQDLMHIVFVHYLEvqgnksnvgdresnevtsnpgkhssltfsfpgnrtkapsgitdstsptstltlscedadsgydaedshqassRAHLYyelpqmgngprmekmdsglsysyflspssgcpevrssipgdyvshaghipndnQDLMIECQKALGLASWEEVLEHcsgendnvpphaklesnvqkenifdgellsreaseensgsslpvqfnwqipladnssHFLKSIMDLSrdlepaydlgdglfeqrthdacllgapepfcafldqqnelpvqnnlqmqqrdveshsqtksnseseihgegtinFSFSVKQKLLngegnlekvDSFSRWMSKELeevdnlhvqssgiewsteecgnvvddsslspslsqdqlfsiidfspkwtytdpeiEVVVTGMFLKSHQEVAKCKWSCmfaevevpaevladgvlccripphavgrvpfyitcsnrlacsevrefdyivgsvkdadisdiygsstseSFLHLRLERILSMrsspqnhlseglcEKQKLISKIIQLKEEEESYQMveanpeknlSQHVEKYQILQKIMKEKLYSWLLRKVcedgkgpcilddegqGVLHLAASLgydwaikptvtagvsinfrdlsgwTALHWAAYCGREKTVAVLLSLgaapglltdpspefplsrtpsdlassnghkgisgFLAESSLTSLLLSLKmndsaddgalEDSIAKAVQTVSektatpandndesdvLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAakslrpvqgdglaHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVrghqarkkyrpiiwSVGILEKVILRWRrkgsglrgfrrdalgmnpnpqhmplkeddydfLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEgsretkesnmvpnglediadgdldlididslldddtfmsvafe
Flexible Loop (DISEMBL)
madrgsyalaprldmQQLQMEAQHRWLRPAEICEILCNYQKFHIaseppsrppsgslFLFDRKVLRYfrkdghnwrkkkdgktvreaheklkvgsvdVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVgdresnevtsnpgkhssltfsfpgnrtkapsgitdstsptsTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSqtksnseseihgegtiNFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQnhlseglcekqKLISKIIQLKEEEESYQMVeanpeknlsqHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVsektatpandndesdVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKiqahvrghqarkkyrpiiwsvgilekvilrwrrkgsglrgfrrdalgmnpnpqhmplkedDYDFLKDGRKQTEERLQKalgrvksmvqypearaQYRRLLTVvegsretkesnmvpnglediadGDLDLIDIDSLLDDDTFMSVAFE
Low Complexity Region (SEG)
MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDstsptstltlsCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVddsslspslsqdqlfsIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCekqkliskiiqlkeeeesYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAEssltslllslKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGlediadgdldlididslldddTFMSVAFE
Disordered region (IsUnstruct)
********************EAQHRWLRPAEICEILCNYQKFHIA**********SLFLFDRKVLRYFRKDGHNWRKK****TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQ*************************************************************************************************YF****************DYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHC******************************************VQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQ************************************INFSFSVKQKLLNG***L*KVDSFSRWM******VDNLHVQSSGIEWSTEECGNV************DQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERIL******************KLISKII**********************HVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL**********************************************************************************KDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGF***********************************************Y***RAQYRRLLTVV*****************DIADGDLDLIDIDSLLDDDTF******
Disordered Region (DISOPRED)
************LDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEP**RPPSGSLFLFDRKVLRYFRKDGHNWRKKKD****REAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYL****************************************************************************************************************************************************************************************************************************************************************************************************************************************************************************IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLER**************************************************VEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSG******************************G******RLQKALGRVKSMV******AQYRRLLT*************************LDLIDIDSLLDDDTFMSVAF*
Disordered Region (DISEMBL)
MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKS****************HSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDA************SSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLS***********LPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNL*********************HGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMR*********GLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQA********KKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSLLDDDTFMSVAFE
Disordered Region (DISPRO)
*****SYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQG*****************************************************************************************************************************************************************************************************************************************************************************************************************LEKVDSFSRWMSKELE*V*******************************QDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSV***DISDIYGSSTSESFLHLRLERILSMRSSPQNH********************EEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKM*******************************DESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGL********************EDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKE**************DLDLIDIDSLLDDDTFMSVAFE
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSLLDDDTFMSVAFE
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	1082	2.2.26 [Sep-21-2011]
Q6NPP4	1050	Calmodulin-binding transc	yes	no	0.945	0.974	0.546	0.0
Q9FY74	1007	Calmodulin-binding transc	no	no	0.902	0.969	0.520	0.0
Q8GSA7	1032	Calmodulin-binding transc	no	no	0.904	0.948	0.441	0.0
Q9FYG2	1016	Calmodulin-binding transc	no	no	0.509	0.542	0.380	5e-93
O23463	923	Calmodulin-binding transc	no	no	0.518	0.607	0.352	8e-81
Q9LSP8	838	Calmodulin-binding transc	no	no	0.548	0.707	0.337	7e-79
Q9Y6Y1	1673	Calmodulin-binding transc	yes	no	0.101	0.065	0.452	7e-22
A2A891	1682	Calmodulin-binding transc	yes	no	0.101	0.065	0.452	9e-22
O94983	1202	Calmodulin-binding transc	no	no	0.099	0.089	0.442	2e-19
Q80Y50	1208	Calmodulin-binding transc	no	no	0.099	0.089	0.423	1e-17

>sp|Q6NPP4|CMTA2_ARATH Calmodulin-binding transcription activator 2 OS=Arabidopsis thaliana GN=CMTA2 PE=1 SV=1

 Score = 1088 bits (2813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1109 (54%), Positives = 752/1109 (67%), Gaps = 86/1109 (7%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MADRGS+  APRLD++QL  EAQHRWLRPAEICEIL N+QKFHIASEPP+RPPSGSLFLF
Sbjct: 1    MADRGSFGFAPRLDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGS+DVLHCYYAHGEDNENFQRRCYWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTS 180
            EQDLMHIVFVHYLEV+GN+ +    + N   S  G  S                +  + +
Sbjct: 121  EQDLMHIVFVHYLEVKGNRMSTSGTKENHSNSLSGTGS--------------VNVDSTAT 166

Query: 181  PTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSS 240
             +S L+  CEDADSG    DS QASS      E PQ      M   ++    SY      
Sbjct: 167  RSSILSPLCEDADSG----DSRQASSSLQQNPE-PQTVVPQIMHHQNASTINSY------ 215

Query: 241  GCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL 300
                V  +  G   +H   +   N       Q++  + +W+   E+      N+P +A L
Sbjct: 216  NTTSVLGNRDGWTSAHGNRVKGSN------SQRSGDVPAWDASFENSLARYQNLPYNAPL 269

Query: 301  -------------ESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLK 347
                         E   +K ++   E L          + L  Q NWQ P+ + S    K
Sbjct: 270  TQTQPSTFGLIPMEGKTEKGSLLTSEHLR---------NPLQSQVNWQTPVQE-SVPLQK 319

Query: 348  SIMDLSRDLEPAYDLGDGLFEQRTHD-----ACLLGAPEPFCAFLDQQNELPVQNNLQMQ 402
              MD    +  A DL   LF Q  H+     + LLG+            + P  NN    
Sbjct: 320  WPMDSHSGMTDATDL--ALFGQGAHENFGTFSSLLGS----QDQQSSSFQAPFTNN---- 369

Query: 403  QRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDN 462
                E+    K   E  I+ E + N +  +++ LL  E +L+KVDSFSRW+SKEL E+++
Sbjct: 370  ----EAAYIPKLGPEDLIY-EASANQTLPLRKALLKKEDSLKKVDSFSRWVSKELGEMED 424

Query: 463  LHVQSS--GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMF 520
            L +QSS  GI W++ EC N    SSLSPSLS+DQ F++IDF PKWT TD E+EV+V G F
Sbjct: 425  LQMQSSSGGIAWTSVECENAAAGSSLSPSLSEDQRFTMIDFWPKWTQTDSEVEVMVIGTF 484

Query: 521  LKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVRE 580
            L S QEV    WSCMF EVEVPA++L DGVLCC  PPH VGRVPFYITCS+R +CSEVRE
Sbjct: 485  LLSPQEVTSYSWSCMFGEVEVPADILVDGVLCCHAPPHEVGRVPFYITCSDRFSCSEVRE 544

Query: 581  FDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQ-NHLSEGLCEKQKLISKII 639
            FD++ GS +  + +DIYG++T E+ LHLR E +L++R S Q +H+ E + EK++ ISKI+
Sbjct: 545  FDFLPGSTRKLNATDIYGANTIETSLHLRFENLLALRCSVQEHHIFENVGEKRRKISKIM 604

Query: 640  QLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEG 699
             LK+E+E    +    EK+L++   K +++++  ++KLY WL+ KV E+GKGP ILD++G
Sbjct: 605  LLKDEKEP--PLPGTIEKDLTELEAKERLIREEFEDKLYLWLIHKVTEEGKGPNILDEDG 662

Query: 700  QGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPG 759
            QGVLHLAA+LGYDWAIKP + AGVSINFRD +GW+ALHWAA+ GRE TVAVL+SLGA  G
Sbjct: 663  QGVLHLAAALGYDWAIKPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAG 722

Query: 760  LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAK 819
             L DPSPE PL +T +DLA  NGH+GISGFLAESSLTS L  L + D+ ++ + + S AK
Sbjct: 723  ALADPSPEHPLGKTAADLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAK 781

Query: 820  AVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF-- 877
            AV TV+E+TATP +  D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   
Sbjct: 782  AVLTVAERTATPMSYGDVPETLSMKDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGG 841

Query: 878  NNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQ 937
            +N+  IS E A+S  AAK+ +     G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQ
Sbjct: 842  DNKFDISDELAVSFAAAKTKKSGHSSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQ 901

Query: 938  AHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDY 997
            AHVRGHQ RK+YR IIWSVG+LEK+ILRWRRKGSGLRGF+RD +     P     +EDDY
Sbjct: 902  AHVRGHQVRKQYRAIIWSVGLLEKIILRWRRKGSGLRGFKRDTISKPTEPVCPAPQEDDY 961

Query: 998  DFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETK--ESNMVPNGLE 1055
            DFLK+GRKQTEERLQKAL RVKSM QYPEARAQYRRLLTVVEG RE +   S+ + N  E
Sbjct: 962  DFLKEGRKQTEERLQKALTRVKSMAQYPEARAQYRRLLTVVEGFRENEASSSSALKNNTE 1021

Query: 1056 DIADGDLD--LIDIDSLLDDDTFMSVAFE 1082
            + A+ + +  LIDIDSLLDDDTFMS+AFE
Sbjct: 1022 EAANYNEEDDLIDIDSLLDDDTFMSLAFE 1050

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.
Arabidopsis thaliana (taxid: 3702)

>sp|Q9FY74|CMTA1_ARATH Calmodulin-binding transcription activator 1 OS=Arabidopsis thaliana GN=CMTA1 PE=2 SV=2

 Score = 1023 bits (2646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1103 (52%), Positives = 724/1103 (65%), Gaps = 127/1103 (11%)

Query: 1    MADRGSY-ALAP--RLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSL 57
            M DR S+ ++ P  +LDM+QL  EAQHRWLRP EICEIL NY KFHIASE P+RP SGSL
Sbjct: 1    MVDRRSFGSITPPLQLDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSL 60

Query: 58   FLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCY 117
            FLFDRKVLRYFRKDGHNWRKKKDGKT+REAHEKLKVGS+DVLHCYYAHGE NENFQRRCY
Sbjct: 61   FLFDRKVLRYFRKDGHNWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCY 120

Query: 118  WMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITD 177
            WMLEQ LMHIVFVHYLEV+GN++++G +E+N  + N                 A   I  
Sbjct: 121  WMLEQHLMHIVFVHYLEVKGNRTSIGMKENNSNSVN---------------GTASVNIDS 165

Query: 178  STSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLS 237
            + SPTSTL+  CEDAD+G    DS QASS      E PQ GN              Y  +
Sbjct: 166  TASPTSTLSSLCEDADTG----DSQQASSVLRPSPE-PQTGN-------------RYGWT 207

Query: 238  PSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPH 297
            P+ G   V S + G+ V  +            + Q+ + + + + V    +  +D  P  
Sbjct: 208  PAPGMRNV-SQVHGNRVRES------------DSQRLVDVRALDTVGNSLTRFHDQ-PYC 253

Query: 298  AKLESNVQKENIFDGELLSREASE-------ENSGSSLPVQFNWQIPLADNSSHFLKSIM 350
              L + +Q  N     +L  E SE       E+  + L  QFNWQ    D++        
Sbjct: 254  NNLLTQMQPSNT--DSMLVEENSEKGGRLKAEHIRNPLQTQFNWQ----DDT-------- 299

Query: 351  DLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHS 410
            DL+            LFEQ   D       E F + L  +N  P             S+ 
Sbjct: 300  DLA------------LFEQSAQDNF-----ETFSSLLGSENLQPFGI----------SYQ 332

Query: 411  QTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS-- 468
               SN +SE            V + L   E +L+KVDSFS+W  KEL E+++L +QSS  
Sbjct: 333  APPSNMDSEY---------MPVMKILRRSEDSLKKVDSFSKWAIKELGEMEDLQMQSSRG 383

Query: 469  GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVA 528
             I W+T EC       SLSPSLS+DQ F+I+DF PK   TD E+EV+V G FL S QEV 
Sbjct: 384  DIAWTTVECETAAAGISLSPSLSEDQRFTIVDFWPKSAKTDAEVEVMVIGTFLLSPQEVT 443

Query: 529  KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSV 588
            K  WSCMF EVEVPAE+L DGVLCC  PPH  G VPFY+TCSNR ACSEVREFD++ GS 
Sbjct: 444  KYNWSCMFGEVEVPAEILVDGVLCCHAPPHTAGHVPFYVTCSNRFACSEVREFDFLSGST 503

Query: 589  KDADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEES 647
            +  + +D+YG+ T+E+ L LR E++L+ R    ++H+ E + +K++ ISKI+ LKEE+E 
Sbjct: 504  QKINATDVYGTYTNEASLQLRFEKMLAHRDFVHEHHIFEDVGDKRRQISKIMLLKEEKE- 562

Query: 648  YQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA 707
              ++    +++ ++   K Q+ +++ +E+LY WL+ KV E+GKGP ILD++GQG+LH  A
Sbjct: 563  -YLLPGTYQRDSTKQEPKGQLFRELFEEELYIWLIHKVTEEGKGPNILDEDGQGILHFVA 621

Query: 708  SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE 767
            +LGYDWAIKP + AGV+INFRD +GW+ALHWAA+ GRE+TVAVL+SLGA  G LTDPSPE
Sbjct: 622  ALGYDWAIKPVLAAGVNINFRDANGWSALHWAAFSGREETVAVLVSLGADAGALTDPSPE 681

Query: 768  FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEK 827
             PL +T +DLA +NGH+GISGFLAESSLTS L  L + DS ++        KAVQTVSE+
Sbjct: 682  LPLGKTAADLAYANGHRGISGFLAESSLTSYLEKLTV-DSKENSPANSCGEKAVQTVSER 740

Query: 828  TATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNE--LGISY 885
            TA P    D  + LSLKDSLTA+ NATQAADR+HQ+FRMQSFQRKQL +  ++  + IS 
Sbjct: 741  TAAPMTYGDVPEKLSLKDSLTAVRNATQAADRLHQVFRMQSFQRKQLCDIGDDEKIDISD 800

Query: 886  EHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQA 945
            + A+S  A+K+  P QGD     AA  IQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ 
Sbjct: 801  QLAVSFAASKTKNPGQGDVSLSCAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQV 860

Query: 946  RKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQ--------HMPLKEDDY 997
            RK+YR +IWSVG+LEK+ILRWRRKG+GLRGF+R+A+     P+         +P +ED+Y
Sbjct: 861  RKQYRTVIWSVGLLEKIILRWRRKGNGLRGFKRNAVAKTVEPEPPVSAICPRIP-QEDEY 919

Query: 998  DFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESN--MVPNGLE 1055
            D+LK+GRKQTEERLQKAL RVKSMVQYPEAR QYRRLLTVVEG RE + S+   + N  E
Sbjct: 920  DYLKEGRKQTEERLQKALTRVKSMVQYPEARDQYRRLLTVVEGFRENEASSSASINNKEE 979

Query: 1056 DIADGDL-DLIDIDSLLDDDTFM 1077
            +  + +  D IDI+SLL+DDT M
Sbjct: 980  EAVNCEEDDFIDIESLLNDDTLM 1002

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'. Activates the expression of the V-PPase proton pump in pollen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q8GSA7|CMTA3_ARATH Calmodulin-binding transcription activator 3 OS=Arabidopsis thaliana GN=CMTA3 PE=1 SV=1

 Score =  812 bits (2097), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/1120 (44%), Positives = 656/1120 (58%), Gaps = 141/1120 (12%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MA+   ++    LD+ Q+  EA+HRWLRP EICEIL NYQ+F I++EPP+ P SGS+F+F
Sbjct: 1    MAEARRFSPVHELDVGQILSEARHRWLRPPEICEILQNYQRFQISTEPPTTPSSGSVFMF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHE+LK GSVDVLHCYYAHG+DNENFQRR YW+L
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGQDNENFQRRSYWLL 120

Query: 121  EQDLMHIVFVHYLEVQGNKS----NVGDRESNEVTSNPGKHSSLT--------FSFPGNR 168
            +++L HIVFVHYLEV+G++     N   R  +   S      +LT         SF  N 
Sbjct: 121  QEELSHIVFVHYLEVKGSRVSTSFNRMQRTEDAARSPQETGDALTSEHDGYASCSFNQND 180

Query: 169  TKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDS 228
                S  TDS S     +   EDA+S Y+       SS A+ + EL Q   G  +   D 
Sbjct: 181  HSNHSQTTDSASVNGFHSPELEDAESAYN----QHGSSTAYSHQELQQPATGGNLTGFDP 236

Query: 229  GLSYSYFLSPSSGCPEVRSSIP----GDYVSHAGHIPNDNQDLMIECQKALGLASWEEVL 284
               Y   L+P     +   +IP       V  +  I +      ++ +K++   +WEE+L
Sbjct: 237  --YYQISLTPRDSYQKELRTIPVTDSSIMVDKSKTINSPGVTNGLKNRKSIDSQTWEEIL 294

Query: 285  EHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSH 344
             +C                                     GS +       +PL  NS H
Sbjct: 295  GNC-------------------------------------GSGVEA-----LPLQPNSEH 312

Query: 345  -FLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQ 403
              L  I++ S  ++    L + + + +  +       +    F  Q  EL   +NL   +
Sbjct: 313  EVLDQILESSFTMQDFASLQESMVKSQNQELNSGLTSDRTVWFQGQDMELNAISNLASNE 372

Query: 404  RDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNG---EGNLEKVDSFSRWMSKELEEV 460
            +                       +  ++KQ LL+G   E  L+K+DSF+RWMSKEL +V
Sbjct: 373  K---------------------APYLSTMKQHLLHGALGEEGLKKMDSFNRWMSKELGDV 411

Query: 461  -------DNLHVQSSGIEWS---TEECGNV------VDDSSLSPSLSQDQLFSIIDFSPK 504
                   ++    SS   W    +E+  N       +D   +SPSLS++QLFSI DFSP 
Sbjct: 412  GVIADANESFTQSSSRTYWEEVESEDGSNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPS 471

Query: 505  WTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVP 564
            W Y   E+ V VTG FLK+ +E    +WSCMF + EVPA+V+++G+L C  P H  GRVP
Sbjct: 472  WAYVGCEVVVFVTGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVP 531

Query: 565  FYITCSNRLACSEVREFDYIVG--SVKDADISDIYGSSTSESFLHLRLERILSMRSSPQN 622
            FY+TCSNRLACSEVREF+Y V    V D +  D     ++   L  R  ++L  +S   +
Sbjct: 532  FYVTCSNRLACSEVREFEYKVAESQVFDREADD----ESTIDILEARFVKLLCSKSENTS 587

Query: 623  HLSEGLCEKQKLISKI-IQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL 681
             +S    +  +L  KI + L E ++    +  N    +SQ   K  +LQ+ +KE L+SWL
Sbjct: 588  PVSGNDSDLSQLSEKISLLLFENDDQLDQMLMN---EISQENMKNNLLQEFLKESLHSWL 644

Query: 682  LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 741
            L+K+ E GKGP +LD+ GQGVLH AASLGY+WA++PT+ AGVS++FRD++GWTALHWAA+
Sbjct: 645  LQKIAEGGKGPSVLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAF 704

Query: 742  CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLS 801
             GRE+ +  L++LGAAPG LTDP+P+FP   TPSDLA +NGHKGI+G+L+E +L + +  
Sbjct: 705  FGRERIIGSLIALGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSL 764

Query: 802  LKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIH 861
            L +ND                    K A            SL DSLTA+ NATQAA RIH
Sbjct: 765  LSLND--------------------KNAETVEMAPSPSSSSLTDSLTAVRNATQAAARIH 804

Query: 862  QIFRMQSFQRKQLTEFNN-ELGISYEHALSLVAAKSLRP--VQGDGLAHSAAIQIQKKFR 918
            Q+FR QSFQ+KQL EF + +LG+S E ALS++A K+ +      D    +AAI+IQ KFR
Sbjct: 805  QVFRAQSFQKKQLKEFGDKKLGMSEERALSMLAPKTHKSGRAHSDDSVQAAAIRIQNKFR 864

Query: 919  GWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRR 978
            G+K RK++L+ RQRI+KIQAHVRG+Q RK YR IIWSVG+LEKVILRWRRKG+GLRGF+ 
Sbjct: 865  GYKGRKDYLITRQRIIKIQAHVRGYQFRKNYRKIIWSVGVLEKVILRWRRKGAGLRGFKS 924

Query: 979  DALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVV 1038
            +AL      Q    KE+D DF K GRKQTE+RLQKAL RVKSMVQYPEAR QYRRLL VV
Sbjct: 925  EAL--VEKMQDGTEKEEDDDFFKQGRKQTEDRLQKALARVKSMVQYPEARDQYRRLLNVV 982

Query: 1039 EGSRETKESNMVPNGLEDIADGDLDLIDIDSLL-DDDTFM 1077
               +E+K    + N      D D DLIDI++LL DDDT M
Sbjct: 983  NDIQESKVEKALENSEATCFDDDDDLIDIEALLEDDDTLM 1022

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FYG2|CMTA4_ARATH Calmodulin-binding transcription activator 4 OS=Arabidopsis thaliana GN=CMTA4 PE=1 SV=1

 Score =  343 bits (879), Expect = 5e-93,   Method: Compositional matrix adjust.
 Identities = 227/596 (38%), Positives = 344/596 (57%), Gaps = 45/596 (7%)

Query: 491  SQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGV 550
            + +Q F+I D SP W Y +   +V++ G FL    E     WSCMF   +VP E++ +GV
Sbjct: 441  AHNQKFTIQDISPDWGYANETTKVIIIGSFLCDPTEST---WSCMFGNAQVPFEIIKEGV 497

Query: 551  LCCRIPPHAVGRVPFYITCSNRLACSEVREFDY------IVGSVKDADISDIYGSSTSES 604
            + C  P    G+V   IT  + L CSE+REF+Y            +   SD+  +S +E 
Sbjct: 498  IRCEAPQCGPGKVNLCITSGDGLLCSEIREFEYREKPDTCCPKCSEPQTSDM-STSPNEL 556

Query: 605  FLHLR-LERILSMRSSP-QNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANP-EKNLSQ 661
             L +R ++ +LS RSS  +++L  G     KL++K   LK +++ ++ V     + + S 
Sbjct: 557  ILLVRFVQTLLSDRSSERKSNLESG---NDKLLTK---LKADDDQWRHVIGTIIDGSASS 610

Query: 662  HVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA 721
                  +LQ+++K+KL +WL  + C++    C L  + QG++H+ A LG++WA  P +  
Sbjct: 611  TSTVDWLLQELLKDKLDTWLSSRSCDEDYITCSLSKQEQGIIHMVAGLGFEWAFYPILAH 670

Query: 722  GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSN 781
            GV+++FRD+ GW+ALHWAA  G EK VA L++ GA+ G +TDPS + P  +T + +A+SN
Sbjct: 671  GVNVDFRDIKGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASIAASN 730

Query: 782  GHKGISGFLAESSLTSLLLSLKMNDSADD-GALEDSIAKAVQTVSEKTATPANDNDESDV 840
            GHKG++G+L+E +LT+ L SL + ++ +     +    K + ++SE+  +P+ + D+   
Sbjct: 731  GHKGLAGYLSEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQ--SPSGNEDQ--- 785

Query: 841  LSLKDSLTAICNATQAADRIHQIFRMQSFQRKQ-----LTEFNNELGISYEHALSLVAAK 895
            +SLKD+L A+ NA QAA RI   FR  SF++++     L     E G+  E    + A  
Sbjct: 786  VSLKDTLAAVRNAAQAAARIQAAFRAHSFRKRKQREAALVACLQEYGMYCEDIEGISAMS 845

Query: 896  SLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWS 955
             L   +G    +SAA+ IQK FRG+K RK FL +RQ++VKIQAHVRG+Q RK Y+ I W+
Sbjct: 846  KLTFGKGRNY-NSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWA 904

Query: 956  VGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQ-TEERLQKA 1014
            V IL+KV+LRWRRKG GLRGFR+D      +        +D D LK  RKQ  +  + +A
Sbjct: 905  VRILDKVVLRWRRKGVGLRGFRQDVESTEDS--------EDEDILKVFRKQKVDVAVNEA 956

Query: 1015 LGRVKSMVQYPEARAQYRRLL-----TVVEGSRETKESNMVPNGLEDIADGDLDLI 1065
              RV SM   PEAR QY R+L     T  E  +         +GL DIAD + D +
Sbjct: 957  FSRVLSMSNSPEARQQYHRVLKRYCQTKAELGKTETLVGEDDDGLFDIADMEYDTL 1012

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|O23463|CMTA5_ARATH Calmodulin-binding transcription activator 5 OS=Arabidopsis thaliana GN=CMTA5 PE=2 SV=2

 Score =  302 bits (774), Expect = 8e-81,   Method: Compositional matrix adjust.
 Identities = 219/622 (35%), Positives = 323/622 (51%), Gaps = 61/622 (9%)

Query: 436  LLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGI--EWSTEECGNVVDDSSLSPSLSQ- 492
            L NG G+    DSF RW       V+N    S G   + S E       DSS  P++   
Sbjct: 315  LNNGYGSQ---DSFGRW-------VNNFISDSPGSVDDPSLEAVYTPGQDSSTPPTVFHS 364

Query: 493  -----DQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLA 547
                 +Q+F+I D SP W Y+  + +++VTG F  S Q + +    C+  E+ VPAE L 
Sbjct: 365  HSDIPEQVFNITDVSPAWAYSTEKTKILVTGFFHDSFQHLGRSNLICICGELRVPAEFLQ 424

Query: 548  DGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDY-IVGSVKDADISDIYGSSTSESFL 606
             GV  C +PP + G V  Y++       S++  F++  V  ++ A   D       E   
Sbjct: 425  MGVYRCFLPPQSPGVVNLYLSVDGNKPISQLFSFEHRSVQFIEKAIPQDDQLYKWEEFEF 484

Query: 607  HLRLERILSMRSSPQNHLS-----EGLCEKQKLISKIIQLKEEEESYQM--VEAN--PEK 657
             +RL  +L   S+  + L+     E L E +KL S+   L     +Y M  ++AN  P  
Sbjct: 485  QVRLAHLLFTSSNKISVLTSKISPENLLEAKKLASRTSHLLNSW-AYLMKSIQANEVPFD 543

Query: 658  NLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKP 717
                H     + +  +K +L  WLL KV E+ +     D +G GV+HL A LGY W+I  
Sbjct: 544  QARDH-----LFELTLKNRLKEWLLEKVIEN-RNTKEYDSKGLGVIHLCAVLGYTWSILL 597

Query: 718  TVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL 777
               A +S++FRD  GWTALHWAAY GREK VA LLS GA P L+TDP+ EF    T +DL
Sbjct: 598  FSWANISLDFRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTKEFLGGCTAADL 657

Query: 778  ASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTV-SEKTATPANDND 836
            A   G+ G++ FLAE  L +     +  D    G    +I+  ++T+ +EK++ P N N+
Sbjct: 658  AQQKGYDGLAAFLAEKCLVA-----QFKDMQTAG----NISGNLETIKAEKSSNPGNANE 708

Query: 837  ESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQ-RKQLTEFNNELGISYEHALSLVAAK 895
            E    SLKD+L A   A +AA RI   FR    + R     F ++     E A +++AA 
Sbjct: 709  EEQ--SLKDTLAAYRTAAEAAARIQGAFREHELKVRSSAVRFASK----EEEAKNIIAAM 762

Query: 896  SLRPVQGDGLAH---SAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPI 952
             ++    +       +AA +IQ +F+ WK R+EFL +R++ ++IQA  RG Q R++Y+ I
Sbjct: 763  KIQHAFRNFEVRRKIAAAARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQYQKI 822

Query: 953  IWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQ 1012
             WSVG+LEK ILRWR K  G RG +         P      E   DF K  +KQ EERL+
Sbjct: 823  TWSVGVLEKAILRWRLKRKGFRGLQVS------QPDEKEGSEAVEDFYKTSQKQAEERLE 876

Query: 1013 KALGRVKSMVQYPEARAQYRRL 1034
            +++ +V++M +  +A+  YRR+
Sbjct: 877  RSVVKVQAMFRSKKAQQDYRRM 898

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'. Activates the expression of the V-PPase proton pump in pollen.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LSP8|CMTA6_ARATH Calmodulin-binding transcription activator 6 OS=Arabidopsis thaliana GN=CMTA6 PE=2 SV=1

 Score =  296 bits (758), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 215/637 (33%), Positives = 334/637 (52%), Gaps = 44/637 (6%)

Query: 411  QTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGI 470
            Q  +N  +E HG  T+    S+   L +G  + E   SF RWM+  + E  N  ++    
Sbjct: 206  QNAANGTAE-HGNATVA-DGSLDALLNDGPQSRE---SFGRWMNSFISE-SNGSLEDPSF 259

Query: 471  EWSTEECGNVVDDSSLSPSLSQ--DQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVA 528
            E       + +   ++  S S   +Q+F+I D SP W Y+  + +++VTG    S+Q + 
Sbjct: 260  EPMVMPRQDPLAPQAVFHSHSNIPEQVFNITDVSPAWAYSSEKTKILVTGFLHDSYQHLE 319

Query: 529  KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSV 588
            +    C+  +  VPAE L  GV  C IPPH+ G V  Y++       S+   F++    V
Sbjct: 320  RSNLYCVCGDFCVPAEYLQAGVYRCIIPPHSPGMVNLYLSADGHKPISQCFRFEHRAVPV 379

Query: 589  KDADISDIYGSSTSESF-LHLRLERILSMRSSPQNHLS-----EGLCEKQKLISKIIQLK 642
             D  + +    S  E F   +RL  +L   S+  N LS       L + +KL SK   L 
Sbjct: 380  LDKTVPEDNQDSKWEEFEFQVRLSHLLFTSSNKLNVLSSKISPHNLRDAKKLASKTNHLL 439

Query: 643  EEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGV 702
                +Y +V++     +S    K  + +  +K +L  WL+ KV E G+     D +G GV
Sbjct: 440  NSW-AY-LVKSIQGNKVSFDQAKDHLFELSLKNRLKEWLMEKVLE-GRNTLDYDSKGLGV 496

Query: 703  LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762
            +HL ASLGY W+++    +G+S+NFRD  GWTALHWAAY GREK VA LLS GA P L+T
Sbjct: 497  IHLCASLGYTWSVQLFSLSGLSLNFRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVT 556

Query: 763  DPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQ 822
            D + +       +DLA  NG+ G++ +LAE  L +    +K+  +   G LE   A+ + 
Sbjct: 557  DSTKDNLGGCMAADLAQQNGYDGLAAYLAEKCLVAQFRDMKIAGNI-TGDLEACKAEMLN 615

Query: 823  TVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQ--RKQLTEFNNE 880
                +   P ++       SLKD+L A   A +AA RI   FR ++ +  R  + +F N+
Sbjct: 616  ----QGTLPEDEQ------SLKDALAAYRTAAEAAARIQGAFREKALKAARSSVIQFANK 665

Query: 881  LGISYEHALSLVAAKSLRPV---QGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQ 937
                 E A S++AA  ++             AA +IQ +F+ WK R+E+L +R++ ++IQ
Sbjct: 666  ----EEEAKSIIAAMKIQNAFRKYDTRRKIEAAYRIQCRFQTWKIRREYLNMRRQAIRIQ 721

Query: 938  AHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDY 997
            A  RG QAR++Y+ I+WSVG+LEK +LRWR+K  G RG +  A   +P        E   
Sbjct: 722  AAFRGLQARRQYKKILWSVGVLEKAVLRWRQKRKGFRGLQVAAEEDSPG-------EAQE 774

Query: 998  DFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRL 1034
            DF K  ++Q EERL++++ RV++M +  +A+  YRR+
Sbjct: 775  DFYKTSQRQAEERLERSVVRVQAMFRSKKAQQDYRRM 811

Regulates transcriptional activity in response to calcium signals. Binds to the consensus sequence 5'-[ACG]CGCG[GTC]-3'.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9Y6Y1|CMTA1_HUMAN Calmodulin-binding transcription activator 1 OS=Homo sapiens GN=CAMTA1 PE=1 SV=4

 Score =  107 bits (266), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 5/115 (4%)

Query: 23  QHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
           +HRW    EI   L  ++K    + + P +RP +GS+ L++RK ++Y RKDG+ W+K+KD
Sbjct: 71  RHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWKKRKD 129

Query: 81  GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
           GKT RE H KLKV  V+ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct: 130 GKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

Transcriptional activator. May act as a tumor suppressor.

Homo sapiens (taxid: 9606)

>sp|A2A891|CMTA1_MOUSE Calmodulin-binding transcription activator 1 OS=Mus musculus GN=Camta1 PE=2 SV=1

 Score =  106 bits (265), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/115 (45%), Positives = 71/115 (61%), Gaps = 5/115 (4%)

Query: 23  QHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
           +HRW    EI   L  ++K    + + P +RP +GS+ L++RK ++Y RKDG+ W+K+KD
Sbjct: 71  RHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWKKRKD 129

Query: 81  GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
           GKT RE H KLKV  V+ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct: 130 GKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

Transcriptional activator.

Mus musculus (taxid: 10090)

>sp|O94983|CMTA2_HUMAN Calmodulin-binding transcription activator 2 OS=Homo sapiens GN=CAMTA2 PE=1 SV=3

 Score = 99.0 bits (245), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 5/113 (4%)

Query: 25  RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
           RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct: 40  RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query: 83  TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
           T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct: 99  TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

Transcription activator. May act as tumor suppressor.

Homo sapiens (taxid: 9606)

>sp|Q80Y50|CMTA2_MOUSE Calmodulin-binding transcription activator 2 OS=Mus musculus GN=Camta2 PE=2 SV=1

 Score = 92.8 bits (229), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 50/118 (42%), Positives = 69/118 (58%), Gaps = 10/118 (8%)

Query: 25  RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
           RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct: 40  RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query: 83  TVREAHEKLKVGSVD-----VLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
           T RE H KLKV  ++      L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct: 99  TTREDHMKLKVQGMEPVSWQCLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 154

Transcription activator. May act as tumor suppressor.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	1082
356528046	1079	PREDICTED: calmodulin-binding transcript	0.985	0.987	0.591	0.0
356557555	1088	PREDICTED: calmodulin-binding transcript	0.991	0.986	0.595	0.0
356510676	1046	PREDICTED: calmodulin-binding transcript	0.953	0.986	0.582	0.0
449438552	1067	PREDICTED: calmodulin-binding transcript	0.957	0.970	0.578	0.0
357445841	1052	Calmodulin-binding transcription activat	0.946	0.973	0.560	0.0
297794005	1062	calmodulin-binding protein [Arabidopsis	0.962	0.980	0.554	0.0
30697970	1050	calmodulin-binding transcription activat	0.945	0.974	0.546	0.0
9759398	1014	ER66 protein-like [Arabidopsis thaliana]	0.892	0.952	0.533	0.0
297806971	997	calmodulin-binding transcription activat	0.894	0.970	0.523	0.0
186521534	1007	calmodulin-binding transcription activat	0.902	0.969	0.520	0.0

>gi|356528046|ref|XP_003532616.1| PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max]

 Score = 1217 bits (3150), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 648/1095 (59%), Positives = 783/1095 (71%), Gaps = 29/1095 (2%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            M++R S+ L PRLD+QQLQ+EAQHRWLRPAEICEIL NY+ F I SEPP+RPPSGSLFLF
Sbjct: 1    MSERSSFGLGPRLDLQQLQLEAQHRWLRPAEICEILRNYRMFQITSEPPNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGSVDVLHCYYAHGE+NENFQRR YWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRE-SNEVTSNPGKHSSLTFSFPGNRTKAPSGITDST 179
            E D+MHIVFVHYL+V+ NK+N+G +  S+EVTS+  K SSL+  FP N    PSG TDS 
Sbjct: 121  ELDMMHIVFVHYLDVKVNKTNIGGKTYSDEVTSDSQKSSSLSSGFPRNYGSMPSGSTDSM 180

Query: 180  SPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPS 239
            SPTSTLT  CEDADS    ED HQASS  H Y E   +GN   M+K+ +  + SY + P 
Sbjct: 181  SPTSTLTSLCEDADS----EDIHQASSGLHSYRESQNLGNDRPMDKIHARSNSSYLMHPF 236

Query: 240  SGCPEVRSSIPGDYVSHA-GHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVP--- 295
            S           +Y+ H  G+    +    IE Q+A G+ASW+  +E  +G++ +     
Sbjct: 237  SDNHGQLPVSGAEYIPHVQGNKSRASDTTYIEGQRAHGIASWDNAMEQSAGKHADPSLVS 296

Query: 296  ----PHAKLESNVQKENIFDGELLSRE-ASEENSGSSLPVQFNWQIPLADNSSHFLKSIM 350
                P + + + + K +   G LL  + A  E    + PVQ NWQIP  DN+        
Sbjct: 297  STSIPSSAMGNILDKNHTVPGNLLGHKIALTEVERGAQPVQSNWQIPFEDNTGELPNWGF 356

Query: 351  DLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHS 410
              S  LE   D G  L    T++A     PE F               L+ Q    +S  
Sbjct: 357  TQSLGLEFGSDYGTSLLGDVTNNAGPEIDPELFT----------FNGELKEQYTHGQSQP 406

Query: 411  QTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS-G 469
              KSNS  E+ GE +IN++ ++++ LL+GE +L+KVDSFSRWM+KEL  VD+LH+QSS G
Sbjct: 407  ALKSNSAYEVPGEASINYALTMRRGLLDGEESLKKVDSFSRWMTKELAGVDDLHMQSSPG 466

Query: 470  IEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAK 529
            I WST+ECG+V+DD+SL  SLSQDQLFSI DFSPKW Y + EIEV++ G FLKS   VAK
Sbjct: 467  ISWSTDECGDVIDDTSLHLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPVVAK 526

Query: 530  CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVK 589
            C WSCMF EVEVPAEVLADG+LCC+ PPH +GRVPFY+TCSNR ACSEVREF+Y  G  +
Sbjct: 527  CNWSCMFGEVEVPAEVLADGILCCQAPPHKIGRVPFYVTCSNRFACSEVREFEYREGFDR 586

Query: 590  DADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEESY 648
            + +  D + +S SE  LHLRL  +LS+ S    N + EG  +K+ LI K+I LKEEEE  
Sbjct: 587  NINFPDFFNNS-SEMELHLRLVGLLSLNSMHTLNQVFEGDMDKRNLIFKLISLKEEEEYS 645

Query: 649  QMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS 708
               E   E ++SQ   K  +  K +KEKLYSWLL KV E GKGP +LD+EGQGVLHL A+
Sbjct: 646  SKEETTAEMDISQQKLKEHMFHKQVKEKLYSWLLHKVTETGKGPLVLDEEGQGVLHLIAA 705

Query: 709  LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF 768
            LGYDWAI P +TAGV+INFRD++GWTALHWAA+CGRE+TVAVL+S+ AA G LTDP PEF
Sbjct: 706  LGYDWAINPIITAGVNINFRDVNGWTALHWAAFCGRERTVAVLVSMDAAAGALTDPCPEF 765

Query: 769  PLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKT 828
            PL RTP+DLASS GHKGISGFLAES LTS L SL M D   DG  E S  K VQTVSE+T
Sbjct: 766  PLGRTPADLASSKGHKGISGFLAESLLTSHLESLTM-DENKDGRKETSGMKVVQTVSERT 824

Query: 829  ATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF-NNELGISYEH 887
            ATP  + D  D + LKDSL A+ NATQAADRI+Q+FRMQSFQRKQL  + ++E G+S + 
Sbjct: 825  ATPVLNGDIPDDICLKDSLNAVRNATQAADRIYQVFRMQSFQRKQLALYEDDEFGLSDQQ 884

Query: 888  ALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARK 947
            ALSL+A+K+ R  QG+GLA++AAIQIQKKFRGW KRKEFL+IRQRIVKIQAHVRGHQ RK
Sbjct: 885  ALSLLASKACRSGQGEGLANAAAIQIQKKFRGWTKRKEFLIIRQRIVKIQAHVRGHQVRK 944

Query: 948  KYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQT 1007
            +Y+PIIWSVGILEKVILRWRRKGSGLRGFR  +    P       KEDDYD+LK+GRKQ+
Sbjct: 945  QYKPIIWSVGILEKVILRWRRKGSGLRGFRPASQNKVPEQPSESPKEDDYDYLKEGRKQS 1004

Query: 1008 EERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLIDI 1067
            E + +KAL RVKSMVQYPEARAQYRR+L VVE  R+TK  N+     E+  DG  DLIDI
Sbjct: 1005 EVKFKKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGGNLNLINSEETVDGVEDLIDI 1064

Query: 1068 DSLLDDDTFMSVAFE 1082
            D LLDD+ F+ +AF+
Sbjct: 1065 DMLLDDENFLPIAFD 1079

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356557555|ref|XP_003547081.1| PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max]

 Score = 1207 bits (3122), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 653/1097 (59%), Positives = 789/1097 (71%), Gaps = 24/1097 (2%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MA+  SY L   LD+QQLQ EAQHRWLRPAEICEIL NY+ FHI SEP +RPPSGSLFLF
Sbjct: 1    MAEGASYGLRRPLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITSEPHNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGSVDVLHCYYAHGE+NENFQRR YWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTS 180
            E D+MHIVFVHYLEV+GNK+ V + E +EV ++  K +S + S P + +   S  TDS S
Sbjct: 121  EPDMMHIVFVHYLEVKGNKNIVVNNEGDEVPTDSQKVTSPSSSLPTHHSCVSSLSTDSVS 180

Query: 181  PTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSS 240
            PT++L    EDADS    ED H ASS  H  +E    GN P  EK+ +G + SY + P S
Sbjct: 181  PTTSLMSLHEDADS----EDIHHASSGLHPLHESQHSGNSPLTEKIGAGSNSSYLMHPFS 236

Query: 241  GCPEVRSSIPG-DYVSHA-GHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHA 298
            G  E +SSI G DY+    G     N     + QK  G+A W  VL+  + +  N P  A
Sbjct: 237  GDNE-QSSISGTDYIPVVHGDKFRGNDTAYTDGQKPHGMAPWGTVLQ-STAKLHNDPSLA 294

Query: 299  KLESNV---------QKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSI 349
               S +         Q+  IF   L+S+    E + SS  +Q NWQIP  DNS       
Sbjct: 295  SFPSILPSSMGDVLEQEHTIFGDLLMSKSGLTEEAESSQSLQSNWQIPFEDNSGGMPMLT 354

Query: 350  MDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESH 409
               S  L+   D G GL    T +A    AP  + +F  +  E P+Q N   +  D +S 
Sbjct: 355  QTQSFGLQFRSDYGTGLLGNETRNASSEIAPILY-SFHGEPKEQPMQQNYPQELEDGQSQ 413

Query: 410  SQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS- 468
               KSNS +++  E TIN+  +VK  LL+ + +L+KVDSFSRW++KEL EV +L++QSS 
Sbjct: 414  HALKSNSANKVPDEETINYGLTVKSTLLDRDESLKKVDSFSRWITKELGEVADLNMQSSP 473

Query: 469  GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVA 528
            GI WST+EC +V+DD+SLSPSLSQDQLFSI DFSPKW Y + EIEV++ G FLKS  EV 
Sbjct: 474  GISWSTDECQHVIDDTSLSPSLSQDQLFSINDFSPKWAYAESEIEVLIIGSFLKSQPEVT 533

Query: 529  KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSV 588
             C WSCMF EVEVPAEVLADG+LCC+ P H VGRVPFY+TCSNRLACSEVREFD+  G  
Sbjct: 534  TCNWSCMFGEVEVPAEVLADGILCCQAPCHKVGRVPFYVTCSNRLACSEVREFDFREGFA 593

Query: 589  KDADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEES 647
            ++ D +D Y SST E   HLRLE  LS++   P NH  EG  EK+ LI K+I L+EEE+ 
Sbjct: 594  RNVDFADFYISST-EMLRHLRLEDFLSLKPVDPSNHSFEGDMEKRNLIFKLISLREEEDY 652

Query: 648  YQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA 707
                E   E ++SQH+ K  +  +  KEKLYSWLL KV E+GKGP +LD++GQGVLHLAA
Sbjct: 653  SIKDEVTRELDISQHMVKEHLFHRQFKEKLYSWLLHKVTENGKGPNVLDEDGQGVLHLAA 712

Query: 708  SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE 767
             LGYDWAI P ++AGV+INFRD++GWTALHWAA CGRE+TVAVL+S+GA  G LTDPSP 
Sbjct: 713  FLGYDWAINPIISAGVNINFRDVNGWTALHWAASCGRERTVAVLVSMGADCGALTDPSPA 772

Query: 768  FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEK 827
            FP  RT +DLASS GHKGISGFLAESSLT  L +L M+D    G  E S  K VQTVSE+
Sbjct: 773  FPSGRTAADLASSYGHKGISGFLAESSLTHHLETLTMDDQKG-GQQEISGMKVVQTVSER 831

Query: 828  TATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNELGISY 885
            +ATP +  D  D + LKDSLTA+ NATQAADRIHQ++RMQSFQRKQLT++  ++ELG+S 
Sbjct: 832  SATPVHYCDIPDAICLKDSLTAVRNATQAADRIHQVYRMQSFQRKQLTQYEGDDELGLSD 891

Query: 886  EHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQA 945
            + ALSL+A+++ +  QGDGLA++AA+QIQKKFRGWKKRKEFL+IRQR+VKIQAHVRGHQ 
Sbjct: 892  QQALSLLASRACKSGQGDGLANAAAVQIQKKFRGWKKRKEFLMIRQRVVKIQAHVRGHQI 951

Query: 946  RKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRK 1005
            RK+Y+PIIWSVGILEKVILRWRRKGSGLRGFR +A+   PN Q+  LKEDDYD+LK+GRK
Sbjct: 952  RKQYKPIIWSVGILEKVILRWRRKGSGLRGFRPNAINKVPNQQNDSLKEDDYDYLKEGRK 1011

Query: 1006 QTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLI 1065
            Q EE++QKAL RVKSMVQYPEARAQYRRLL VVE  R+TK SN      E+  DG  DLI
Sbjct: 1012 QKEEKIQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKASNKGLINSEETVDGVEDLI 1071

Query: 1066 DIDSLLDDDTFMSVAFE 1082
            DID LLDDD F+ +AF+
Sbjct: 1072 DIDMLLDDDNFIPIAFD 1088

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356510676|ref|XP_003524062.1| PREDICTED: calmodulin-binding transcription activator 2-like [Glycine max]

 Score = 1193 bits (3087), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 638/1096 (58%), Positives = 767/1096 (69%), Gaps = 64/1096 (5%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MA+R  + L PRLD+QQLQ+EAQHRWLRPAEICEIL NYQ F I SEPP+ PPSGSLFLF
Sbjct: 1    MAERSCFGLGPRLDLQQLQLEAQHRWLRPAEICEILRNYQMFQITSEPPNGPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGSVDVLHCYYAHGE+NENFQRR YWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRE-SNEVTSNPGKHSSLTFSFPGNRTKAPSGITDST 179
            E D+MHIVFVHYL+V+ NK+NVG +  S+EVTS+  K SSL+  FP N    PSG TDS 
Sbjct: 121  EPDMMHIVFVHYLDVKVNKTNVGGKTYSDEVTSDSQKSSSLSSGFPRNYGSVPSGSTDSM 180

Query: 180  SPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPS 239
            SPTSTLT  CEDADSG    D  Q                                  P 
Sbjct: 181  SPTSTLTSLCEDADSG----DHGQL---------------------------------PV 203

Query: 240  SGCPEVRSSIPGDYVSHA-GHIPNDNQDLMIECQKALGLASWEEVLEHCSGE-------N 291
            SG          +Y+ H  G     +    IE Q+A G+ASW+  +E  +GE       +
Sbjct: 204  SGA---------EYIPHVLGDKSRASDTTYIEGQRAQGIASWDNTMEQSAGEYADPSLVS 254

Query: 292  DNVPPHAKLESNVQKENIFDGELLSRE--ASEENSGSSLPVQFNWQIPLADNSSHFLKSI 349
                P + + + +++ +   G+LL R+   +EE  GS  PVQ NWQIP  DN+       
Sbjct: 255  STTIPSSAVGNILEENHTVPGKLLGRKNALTEEERGSQ-PVQSNWQIPFEDNTGELPNWG 313

Query: 350  MDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESH 409
               S  LE   D G  L    T++A     PE F  F  +  E  V  N        +S 
Sbjct: 314  FTQSLGLEFGSDYGASLLGDVTNNAGPEIVPELF-TFNGELKEQSVHQNFSKLYTHGQSQ 372

Query: 410  SQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS- 468
               KSNSE E+ GE +IN++ ++++ LL+GE +L+KVDSFSRWM+KE   VD+LH+QSS 
Sbjct: 373  PTLKSNSEYEVPGEASINYALTMRRGLLDGEESLKKVDSFSRWMTKEFAGVDDLHMQSSP 432

Query: 469  GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVA 528
            GI WST+ECG+V+DD+SL+ SLSQDQLFSI DFSPKW Y + EIEV++ G FLKS   VA
Sbjct: 433  GISWSTDECGDVIDDTSLNLSLSQDQLFSINDFSPKWAYAESEIEVLIVGTFLKSQPVVA 492

Query: 529  KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSV 588
            KC WSCMF EVEVPAEVLADG+LCC+ PPH +GRVPFY+TCSNR ACSEVREF+Y  G  
Sbjct: 493  KCNWSCMFGEVEVPAEVLADGILCCQAPPHKIGRVPFYVTCSNRFACSEVREFEYREGFD 552

Query: 589  KDADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEES 647
            ++   +D + +ST E  LHLRL  +LS+ S    N + EG  +K+ LI K+I LKEEEE 
Sbjct: 553  RNIQFADCFNNST-EMVLHLRLVGLLSLNSVRTSNQVFEGDMDKRSLIFKLISLKEEEEY 611

Query: 648  YQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA 707
                E   E ++S+H  K  +  K +KEKLYSWLL KV E GKGP +LD+EGQGVLHL A
Sbjct: 612  SSKEETTAEMDISKHKLKELMFHKQVKEKLYSWLLHKVTETGKGPLVLDEEGQGVLHLIA 671

Query: 708  SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE 767
            +LGYDWAI P +TAGV+INFRD++GWTALHWAA+CGRE+TVAVL+S+GAA G  TDP PE
Sbjct: 672  ALGYDWAINPIITAGVNINFRDVNGWTALHWAAFCGRERTVAVLVSMGAAAGAWTDPCPE 731

Query: 768  FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEK 827
            FP  R+P+DLASS GHKGISGFLAES LT  L SL M D   DG  E S  K VQT SE+
Sbjct: 732  FPSGRSPADLASSKGHKGISGFLAESLLTGHLESLTM-DENKDGRKETSGTKVVQTASER 790

Query: 828  TATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF-NNELGISYE 886
            TATP    D  D + LKDSL A+ NATQAADRI+Q+FRMQSFQRKQ  ++ ++E G+S +
Sbjct: 791  TATPVLYGDIPDAICLKDSLNAVRNATQAADRIYQVFRMQSFQRKQFAQYEDDEFGLSDQ 850

Query: 887  HALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR 946
             ALSL+A+K+ +  QG+GLA++AAIQIQKKFRGW KRKEFL+IRQRIVKIQAHVRGHQ R
Sbjct: 851  QALSLLASKTCKSGQGEGLANAAAIQIQKKFRGWTKRKEFLIIRQRIVKIQAHVRGHQVR 910

Query: 947  KKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQ 1006
            K+Y+PIIWSVGILEKVILRWRRKGSGLRGFR  AL   P       KEDDYD+LK+GRKQ
Sbjct: 911  KQYKPIIWSVGILEKVILRWRRKGSGLRGFRPAALNKVPEQPSESPKEDDYDYLKEGRKQ 970

Query: 1007 TEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGLEDIADGDLDLID 1066
            +E + +KAL RVKSMVQYPEARAQYRR+L VVE  R+TK  N+     E+  DG  DLID
Sbjct: 971  SEVKFKKALSRVKSMVQYPEARAQYRRVLNVVEDFRQTKGGNLNLINSEETVDGVEDLID 1030

Query: 1067 IDSLLDDDTFMSVAFE 1082
            ID LLDD+ F+ +AF+
Sbjct: 1031 IDMLLDDENFLPIAFD 1046

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449438552|ref|XP_004137052.1| PREDICTED: calmodulin-binding transcription activator 2-like [Cucumis sativus]

 Score = 1181 bits (3055), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 631/1091 (57%), Positives = 785/1091 (71%), Gaps = 55/1091 (5%)

Query: 14   DMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGH 73
            D++QL +EA+HRWLRPAEICEIL NY KF IASEPP RP SGSLFLFDRKVLRYFRKDGH
Sbjct: 10   DIEQLLVEAKHRWLRPAEICEILRNYTKFRIASEPPDRPSSGSLFLFDRKVLRYFRKDGH 69

Query: 74   NWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYL 133
             WRKKKDGKTVREAHEKLKVGS+DVLHCYYAHGE+NENFQRR YWMLE+ LMHIVFVHYL
Sbjct: 70   KWRKKKDGKTVREAHEKLKVGSIDVLHCYYAHGEENENFQRRSYWMLEEHLMHIVFVHYL 129

Query: 134  EVQGNKSNVGD-RESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDA 192
            EV+GN++NVG   E++EV+++  K  S ++S   N  +A S   DS SPTSTLT  CEDA
Sbjct: 130  EVKGNRTNVGAVVETDEVSTSSQKSRSSSYSSSHN--QAASENADSPSPTSTLTSFCEDA 187

Query: 193  DSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSGCPEVRSSIPG- 251
            D+     D++QA+SR H +   P+MGNG  + K D+G S  YF   SS   E  S++P  
Sbjct: 188  DN-----DTYQATSRFHSFPTSPKMGNGLLVNKPDAGQSNFYFPHSSSNNAEAWSTVPAV 242

Query: 252  DYVSHA---GHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNV---- 304
            DYV+     G   N     M+  QK L  ASWEE+L  C+     VP H  L S++    
Sbjct: 243  DYVTQVQKDGLGGNGGDTSMMGSQKTLSSASWEEILHQCTTGFQTVPSHV-LTSSIEPLP 301

Query: 305  ------QKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEP 358
                  Q+ +  D  L S  A +E+ GS+L +  NWQ+P  DN+  F K  +D   DL  
Sbjct: 302  SGIVFGQENSTPDKLLTSNSAIKEDFGSALAMTSNWQVPFEDNTLSFSKEHVDHFPDLYS 361

Query: 359  AYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKSNSES 418
              D+   L  Q++HDA      E FCA   +QNE  +  NL++Q ++ ES+S  + +S++
Sbjct: 362  VCDIDSRLTAQKSHDATFGRGHEMFCAHPGKQNE-EILPNLELQFKEGESYSTARLSSDN 420

Query: 419  EIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQ-SSGIEWSTEEC 477
            ++  EGTI++S ++KQ L++GE +L+KVDSFSRW+SKEL EVD+LH+  SSG+ W+T EC
Sbjct: 421  DMSKEGTISYSLTLKQSLMDGEESLKKVDSFSRWVSKELGEVDDLHMHPSSGLTWTTVEC 480

Query: 478  GNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFA 537
            G++VDDSSLSPS+S+DQLFSI  FSPKWT  D + EVVV G F+ ++     C WSCMF 
Sbjct: 481  GDMVDDSSLSPSISEDQLFSITAFSPKWTVADLDTEVVVIGRFMGNNNGT-NCHWSCMFG 539

Query: 538  EVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIY 597
            EVEVPAEVLADG+LCC  PPH+VGRVPFY+TCSNR+ACSEVREFDY+ GS +D +++DIY
Sbjct: 540  EVEVPAEVLADGILCCHAPPHSVGRVPFYVTCSNRVACSEVREFDYLAGSAQDVNVTDIY 599

Query: 598  GSSTSESF-LHLRLERILSMR-SSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANP 655
             +  +E   +HLR ER+LS+  S P N LSE   EKQ LI ++I +KEE+++Y   + NP
Sbjct: 600  NAGATEELRMHLRFERLLSLEPSDPSNDLSESALEKQNLIRELITIKEEDDTYGE-DPNP 658

Query: 656  EKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAI 715
            + +  QH  K  +  K+MKEKLYSWL+ KV E GKGP ILD EGQGV+HLAA+LGYDWAI
Sbjct: 659  QNDQIQHQSKEFLFVKLMKEKLYSWLIHKVIEGGKGPNILDSEGQGVIHLAAALGYDWAI 718

Query: 716  KPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPS 775
            +P V AGVSINFRD++GWTALHWAA CGRE TV  L++L A+PGL++DPSPE PL   P+
Sbjct: 719  RPIVAAGVSINFRDINGWTALHWAALCGRELTVGTLITLDASPGLMSDPSPEVPLGIVPA 778

Query: 776  DLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDN 835
            DLAS NGHKGISGFLAE++LTS +                     VQTVSE+ ATP ND 
Sbjct: 779  DLASINGHKGISGFLAEAALTSYV--------------------TVQTVSERRATPVNDG 818

Query: 836  DESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF-NNELGISYEHALSLVAA 894
                 LSLKDSLTA+CNATQAA RI+QI R+QSFQRK+L+E   +E G S    LS + A
Sbjct: 819  FMPGDLSLKDSLTAVCNATQAAGRIYQILRVQSFQRKKLSECGTDEFGSSDNSILSFMKA 878

Query: 895  KSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIW 954
            ++ +    +  AH+AA+QIQKKFRGW+ RKEFLLIRQRIVKIQAHVRGHQ RK+Y+ I+W
Sbjct: 879  RARKSGLSNNPAHAAAVQIQKKFRGWRMRKEFLLIRQRIVKIQAHVRGHQVRKQYKKIVW 938

Query: 955  SVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHM--PLKEDDYDFLKDGRKQTEERLQ 1012
            SVG+++K+ILRWRRKGSGLRGFR DA+  +P P  M  P KEDDYDFLK+GR+QTEER Q
Sbjct: 939  SVGMIDKIILRWRRKGSGLRGFRSDAVPKDP-PALMAPPTKEDDYDFLKEGRRQTEERFQ 997

Query: 1013 KALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPNGL-EDIADGDLDLIDIDSLL 1071
            KAL RVKSM QYPE R QYRRLLTVV+  RETK S MV     E++ +GD D+IDID+LL
Sbjct: 998  KALTRVKSMAQYPEGRDQYRRLLTVVQKCRETKGSAMVVTTTSEEVIEGD-DMIDIDTLL 1056

Query: 1072 DDDTFMSVAFE 1082
            DDD  MS+ F+
Sbjct: 1057 DDDALMSMTFD 1067

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357445841|ref|XP_003593198.1| Calmodulin-binding transcription activator [Medicago truncatula] gi|355482246|gb|AES63449.1| Calmodulin-binding transcription activator [Medicago truncatula]

 Score = 1144 bits (2959), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 622/1110 (56%), Positives = 756/1110 (68%), Gaps = 86/1110 (7%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPS------ 54
            MA+  S+ L PRLD+QQLQ EAQHRWLRPAEICEIL NY+ FHI  EP +RPPS      
Sbjct: 1    MAEPPSFGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYRMFHITPEPHTRPPSTVIAYV 60

Query: 55   ------GSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGED 108
                  GSLFLFDRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGSVD LHCYYAHGE+
Sbjct: 61   SDKLFSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDALHCYYAHGEE 120

Query: 109  NENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVG-DRESNEVTSNPGKHSSLTFSFPGN 167
            NENFQRR YW+LEQD  HIVFVHYLEV+ NKSN+G + +SNEV S+  K +S +   P  
Sbjct: 121  NENFQRRSYWLLEQD-THIVFVHYLEVKSNKSNIGGNADSNEVISDSQKVNSPSSGIPAT 179

Query: 168  RTKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMD 227
             +  PS  TDS SPTS+ T   EDADSG      H  SS + + Y  P            
Sbjct: 180  YSSVPSLSTDSMSPTSSYTSLREDADSG-----DHGQSSVSGMDYIPP------------ 222

Query: 228  SGLSYSYFLSPSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHC 287
               S   F    + C +                               G ASW+ VL+  
Sbjct: 223  --FSRDTFRGNGATCID-------------------------------GQASWDTVLQ-S 248

Query: 288  SGENDNVP--------PHAKLESNV--QKENIFDGELLSREASEENSGSSLPVQFNWQIP 337
            + E    P        P   L SN+  Q++NI     +SR      +GSS P+Q NWQIP
Sbjct: 249  TAELHADPSLVSFTSIPSGSL-SNILDQEDNILGDFSMSRSGLAIGAGSSQPLQSNWQIP 307

Query: 338  LADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQN 397
              DN+ H       LS  LE A D G GL    + +   +  P  F    + + +L  QN
Sbjct: 308  FEDNTGHMPTFTQSLS--LEFASDYGTGLLGNESDNGSSIIDPVLFSFHGEPKEKLAQQN 365

Query: 398  NLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKEL 457
             L+ ++ D       KSNS  E+  E TIN+   V++ LL+ + +L KVDSF+RW++K L
Sbjct: 366  YLE-EKVDGHPRDDLKSNSTKEVPSEETINYPLPVRRTLLDRDESLRKVDSFNRWITKAL 424

Query: 458  EEVDNLHVQSS-GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVV 516
             EVD+L++QSS GI WS ++CG+V+DD+SLSPSLSQDQL+SI DFSPKW Y + + EV++
Sbjct: 425  GEVDDLNMQSSPGISWSADDCGHVIDDTSLSPSLSQDQLYSITDFSPKWAYAESDTEVLI 484

Query: 517  TGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACS 576
             G FLKS  +V  C WSCMF EVEVPAEV+A+G+LCC+ PPH VGRVPFY+TC+NRLACS
Sbjct: 485  IGSFLKSQPDVTACNWSCMFGEVEVPAEVVANGILCCQAPPHKVGRVPFYVTCANRLACS 544

Query: 577  EVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLI 635
            EVREFD+  G  ++ D +D + SS ++  LHLRLE  LS++   P N   EG  EK+ LI
Sbjct: 545  EVREFDFRDGYSRNVDYTDFFNSS-NDMLLHLRLEEFLSLKPVHPSNQTFEGDTEKRSLI 603

Query: 636  SKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCIL 695
             K+I L+EEEE     E   E ++S+H  K  +  +  KEKLYSWLL KV E GKGP +L
Sbjct: 604  LKLISLREEEEYSSKEEQTVEMDISRHKVKKHLFHRQFKEKLYSWLLHKVTESGKGPNVL 663

Query: 696  DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
            D +GQGVLHLAA LGYDWAI   + AGV+INFRD++GWTALHWAA CGRE+TV  L+ +G
Sbjct: 664  DKDGQGVLHLAAGLGYDWAIILILAAGVNINFRDVNGWTALHWAASCGRERTVGALVHMG 723

Query: 756  AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALED 815
            A  G LTDPSPEFP  RT +DLASSNG+KG+SGFLAESSLTS L SL ++D    G  E 
Sbjct: 724  ADCGALTDPSPEFPSGRTAADLASSNGNKGLSGFLAESSLTSHLESLTVDDLHKGGQQEV 783

Query: 816  SIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLT 875
            S  KAVQTVSE+TATP   ND  D L LKDSLTA+ NATQAADRIHQ+FRMQSFQRKQLT
Sbjct: 784  SRTKAVQTVSERTATPVIYNDMPDALCLKDSLTAVRNATQAADRIHQVFRMQSFQRKQLT 843

Query: 876  E---FNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQR 932
            +    ++E G+  + ALSL+A+K+ +  QGDGL ++AA QIQKKFRGWKKRKEFLLIRQR
Sbjct: 844  QDEDDDDEFGLLDQRALSLLASKARKSGQGDGLVNAAATQIQKKFRGWKKRKEFLLIRQR 903

Query: 933  IVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPL 992
            IVKIQAHVRGHQ RK+Y+ +IWSVGILEK+ILRWRRKGSGLRGFR +AL   P+ Q+  L
Sbjct: 904  IVKIQAHVRGHQVRKQYKTVIWSVGILEKIILRWRRKGSGLRGFRPEALNKAPSQQNDSL 963

Query: 993  KEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESNMVPN 1052
            KEDDYD+LK+GRKQ EE++QKAL RVKSMVQYPEARAQYRR+L VVE  R+ K+ NM  +
Sbjct: 964  KEDDYDYLKEGRKQKEEKIQKALSRVKSMVQYPEARAQYRRVLNVVEDFRQKKDCNMGMS 1023

Query: 1053 GLEDIADGDLDLIDIDSLLDDDTFMSVAFE 1082
              E+  DG  DLIDID LLDD+ F  +AF+
Sbjct: 1024 S-EETVDGVEDLIDIDMLLDDENFNPIAFD 1052

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297794005|ref|XP_002864887.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata] gi|297310722|gb|EFH41146.1| calmodulin-binding protein [Arabidopsis lyrata subsp. lyrata]

 Score = 1104 bits (2855), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 612/1103 (55%), Positives = 767/1103 (69%), Gaps = 62/1103 (5%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MADRGS+  APRLD++QL  EAQHRWLRPAEICEIL N+QKFHIASEPP+RPPSGSLFLF
Sbjct: 1    MADRGSFGFAPRLDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGS+DVLHCYYAHGEDNENFQRRCYWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTS 180
            EQDLMHIVFVHYLEV+GN+ +    + N   S  G  S                +  + +
Sbjct: 121  EQDLMHIVFVHYLEVKGNRMSTSGTKENHSNSLSGTGS--------------VNVDSTAT 166

Query: 181  PTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSS 240
             +S L+  CEDADSG    DS QASS      E PQ      M  +++    SY  +   
Sbjct: 167  RSSILSPLCEDADSG----DSRQASSSLQQNPE-PQTVVPQIMHHLNANTMNSYNTTSVL 221

Query: 241  GCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL 300
            G  +  +S PG  +    H    N+    + Q++  + +W+   E+      N+P +A L
Sbjct: 222  GNRDGWTSAPGIGIVSQVH---GNRVKESDSQRSGDVPAWDASFENSLARYQNLPYNAPL 278

Query: 301  ESNVQKENIF---------DGELLSREASEENSGSSLPVQFNWQ---IPLADNSSHFLKS 348
             +  Q  N            G LL+ E   +     L  Q NWQ   IP+ + S    K 
Sbjct: 279  -TQTQPSNFGLIPMEGKTEKGSLLTAEHLRD----PLRNQVNWQLIYIPVQE-SVPLQKW 332

Query: 349  IMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVES 408
             MD    +  A DL   LF Q  H+    G    F + L  QN+ P  ++ Q    + E+
Sbjct: 333  PMDSHSGMTDATDL--ALFGQGAHEN--FGT---FSSLLGSQNQQP--SSFQAPFTNNEA 383

Query: 409  HSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS 468
                K   E  I+ E + N +  +++ LL  E +L+KVDSFSRW+SKEL E+++L +QSS
Sbjct: 384  AYIPKLGPEDLIY-EASANQTLPLRKALLKKEDSLKKVDSFSRWVSKELGEMEDLQMQSS 442

Query: 469  --GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQE 526
              GI W++ EC N    SSLSPSLS+DQ F++IDF PKWT TD E+EV+V G FL S QE
Sbjct: 443  SGGIAWTSVECENAAAGSSLSPSLSEDQRFTMIDFWPKWTQTDSEVEVMVIGTFLLSPQE 502

Query: 527  VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVG 586
            V    WSCMF EVEVPA++L DGVLCC  PPH VGRVPFYITCS+R +CSEVREFD++ G
Sbjct: 503  VTSYSWSCMFGEVEVPADILVDGVLCCHAPPHEVGRVPFYITCSDRFSCSEVREFDFLPG 562

Query: 587  SVKDADISDIYGSSTSESFLHLRLERILSMRSSPQ-NHLSEGLCEKQKLISKIIQLKEEE 645
            S +  + +DIYG++T E+ LH+R E +L++RSS Q +H+ E + EK++ ISKI+ LK+E+
Sbjct: 563  STRKLNATDIYGANTIETSLHVRFENLLALRSSVQEHHIFENVGEKRRKISKIMLLKDEK 622

Query: 646  ESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHL 705
            ES  ++    EK+L++   K +++++  ++KLY WL+ KV E+GKGP ILD++GQGVLHL
Sbjct: 623  ES--LLPGTIEKDLAELEAKDRLIREEFEDKLYLWLIHKVTEEGKGPNILDEDGQGVLHL 680

Query: 706  AASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPS 765
            AA+LGYDWAIKP + AGVSINFRD +GW+ALHWAA+ GRE TVAVL+SLGA  G L DPS
Sbjct: 681  AAALGYDWAIKPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAGALADPS 740

Query: 766  PEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS 825
            PE PL +T +DLA  NGH+GISGFLAESSLTS L  L + D+ ++ + + S AKAV TV+
Sbjct: 741  PEHPLGKTAADLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAKAVLTVA 799

Query: 826  EKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNELGI 883
            E+TATP +  D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   + +  I
Sbjct: 800  ERTATPMSYGDVPETLSMKDSLTAVFNATQAADRLHQVFRMQSFQRKQLSELGGDKKFDI 859

Query: 884  SYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGH 943
            S E A+S  AAK+ +P   +G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQAHVRGH
Sbjct: 860  SDELAVSFAAAKTKKPGHSNGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGH 919

Query: 944  QARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDG 1003
            Q RK+YR IIWSVG+LEK+ILRWRRKGSGLRGF+RD +     P     +EDDYDFLK+G
Sbjct: 920  QVRKQYRAIIWSVGLLEKIILRWRRKGSGLRGFKRDTITKPTEPVCPAPQEDDYDFLKEG 979

Query: 1004 RKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETK--ESNMVPNGLEDIADGD 1061
            RKQTEERL+KAL RVKSM QYPEARAQYRRLLTVVEG RE +   S+ + N  E+ A+ +
Sbjct: 980  RKQTEERLKKALTRVKSMAQYPEARAQYRRLLTVVEGFRENEASSSSALKNNTEEAANYN 1039

Query: 1062 LD--LIDIDSLLDDDTFMSVAFE 1082
             +  LIDIDSLLDDDTFMS+AFE
Sbjct: 1040 EEDDLIDIDSLLDDDTFMSIAFE 1062

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|30697970|ref|NP_201227.3| calmodulin-binding transcription activator 2 [Arabidopsis thaliana] gi|79332100|ref|NP_001032135.1| calmodulin-binding transcription activator 2 [Arabidopsis thaliana] gi|75324343|sp|Q6NPP4.1|CMTA2_ARATH RecName: Full=Calmodulin-binding transcription activator 2; AltName: Full=Ethylene-induced calmodulin-binding protein c; Short=AtER66; Short=EICBP.c; AltName: Full=Signal-responsive protein 4 gi|38603814|gb|AAR24652.1| At5g64220 [Arabidopsis thaliana] gi|110738680|dbj|BAF01265.1| Calmodulin-binding transcription activator 2 [Arabidopsis thaliana] gi|225879158|dbj|BAH30649.1| hypothetical protein [Arabidopsis thaliana] gi|332010473|gb|AED97856.1| calmodulin-binding transcription activator 2 [Arabidopsis thaliana] gi|332010474|gb|AED97857.1| calmodulin-binding transcription activator 2 [Arabidopsis thaliana]

 Score = 1088 bits (2813), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 606/1109 (54%), Positives = 752/1109 (67%), Gaps = 86/1109 (7%)

Query: 1    MADRGSYALAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLF 60
            MADRGS+  APRLD++QL  EAQHRWLRPAEICEIL N+QKFHIASEPP+RPPSGSLFLF
Sbjct: 1    MADRGSFGFAPRLDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLF 60

Query: 61   DRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWML 120
            DRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGS+DVLHCYYAHGEDNENFQRRCYWML
Sbjct: 61   DRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWML 120

Query: 121  EQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTS 180
            EQDLMHIVFVHYLEV+GN+ +    + N   S  G  S                +  + +
Sbjct: 121  EQDLMHIVFVHYLEVKGNRMSTSGTKENHSNSLSGTGS--------------VNVDSTAT 166

Query: 181  PTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSS 240
             +S L+  CEDADSG    DS QASS      E PQ      M   ++    SY      
Sbjct: 167  RSSILSPLCEDADSG----DSRQASSSLQQNPE-PQTVVPQIMHHQNASTINSY------ 215

Query: 241  GCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL 300
                V  +  G   +H   +   N       Q++  + +W+   E+      N+P +A L
Sbjct: 216  NTTSVLGNRDGWTSAHGNRVKGSN------SQRSGDVPAWDASFENSLARYQNLPYNAPL 269

Query: 301  -------------ESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLK 347
                         E   +K ++   E L          + L  Q NWQ P+ + S    K
Sbjct: 270  TQTQPSTFGLIPMEGKTEKGSLLTSEHLR---------NPLQSQVNWQTPVQE-SVPLQK 319

Query: 348  SIMDLSRDLEPAYDLGDGLFEQRTHD-----ACLLGAPEPFCAFLDQQNELPVQNNLQMQ 402
              MD    +  A DL   LF Q  H+     + LLG+            + P  NN    
Sbjct: 320  WPMDSHSGMTDATDL--ALFGQGAHENFGTFSSLLGS----QDQQSSSFQAPFTNN---- 369

Query: 403  QRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDN 462
                E+    K   E  I+ E + N +  +++ LL  E +L+KVDSFSRW+SKEL E+++
Sbjct: 370  ----EAAYIPKLGPEDLIY-EASANQTLPLRKALLKKEDSLKKVDSFSRWVSKELGEMED 424

Query: 463  LHVQSS--GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMF 520
            L +QSS  GI W++ EC N    SSLSPSLS+DQ F++IDF PKWT TD E+EV+V G F
Sbjct: 425  LQMQSSSGGIAWTSVECENAAAGSSLSPSLSEDQRFTMIDFWPKWTQTDSEVEVMVIGTF 484

Query: 521  LKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVRE 580
            L S QEV    WSCMF EVEVPA++L DGVLCC  PPH VGRVPFYITCS+R +CSEVRE
Sbjct: 485  LLSPQEVTSYSWSCMFGEVEVPADILVDGVLCCHAPPHEVGRVPFYITCSDRFSCSEVRE 544

Query: 581  FDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQ-NHLSEGLCEKQKLISKII 639
            FD++ GS +  + +DIYG++T E+ LHLR E +L++R S Q +H+ E + EK++ ISKI+
Sbjct: 545  FDFLPGSTRKLNATDIYGANTIETSLHLRFENLLALRCSVQEHHIFENVGEKRRKISKIM 604

Query: 640  QLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEG 699
             LK+E+E    +    EK+L++   K +++++  ++KLY WL+ KV E+GKGP ILD++G
Sbjct: 605  LLKDEKEP--PLPGTIEKDLTELEAKERLIREEFEDKLYLWLIHKVTEEGKGPNILDEDG 662

Query: 700  QGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPG 759
            QGVLHLAA+LGYDWAIKP + AGVSINFRD +GW+ALHWAA+ GRE TVAVL+SLGA  G
Sbjct: 663  QGVLHLAAALGYDWAIKPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAG 722

Query: 760  LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAK 819
             L DPSPE PL +T +DLA  NGH+GISGFLAESSLTS L  L + D+ ++ + + S AK
Sbjct: 723  ALADPSPEHPLGKTAADLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAK 781

Query: 820  AVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF-- 877
            AV TV+E+TATP +  D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   
Sbjct: 782  AVLTVAERTATPMSYGDVPETLSMKDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGG 841

Query: 878  NNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQ 937
            +N+  IS E A+S  AAK+ +     G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQ
Sbjct: 842  DNKFDISDELAVSFAAAKTKKSGHSSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQ 901

Query: 938  AHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDY 997
            AHVRGHQ RK+YR IIWSVG+LEK+ILRWRRKGSGLRGF+RD +     P     +EDDY
Sbjct: 902  AHVRGHQVRKQYRAIIWSVGLLEKIILRWRRKGSGLRGFKRDTISKPTEPVCPAPQEDDY 961

Query: 998  DFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETK--ESNMVPNGLE 1055
            DFLK+GRKQTEERLQKAL RVKSM QYPEARAQYRRLLTVVEG RE +   S+ + N  E
Sbjct: 962  DFLKEGRKQTEERLQKALTRVKSMAQYPEARAQYRRLLTVVEGFRENEASSSSALKNNTE 1021

Query: 1056 DIADGDLD--LIDIDSLLDDDTFMSVAFE 1082
            + A+ + +  LIDIDSLLDDDTFMS+AFE
Sbjct: 1022 EAANYNEEDDLIDIDSLLDDDTFMSLAFE 1050

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|9759398|dbj|BAB09853.1| ER66 protein-like [Arabidopsis thaliana]

 Score = 1040 bits (2688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 587/1100 (53%), Positives = 728/1100 (66%), Gaps = 134/1100 (12%)

Query: 13   LDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDG 72
            +D++QL  EAQHRWLRPAEICEIL N+QKFHIASEPP+RPPSGSLFLFDRKVLRYFRKDG
Sbjct: 19   VDIKQLLSEAQHRWLRPAEICEILRNHQKFHIASEPPNRPPSGSLFLFDRKVLRYFRKDG 78

Query: 73   HNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHY 132
            HNWRKKKDGKTV+EAHEKLKVGS+DVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHY
Sbjct: 79   HNWRKKKDGKTVKEAHEKLKVGSIDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHY 138

Query: 133  LEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDSTSPTSTLTLSCEDA 192
            LEV+GN+ +    + N   S  G  S                +  + + +S L+  CEDA
Sbjct: 139  LEVKGNRMSTSGTKENHSNSLSGTGS--------------VNVDSTATRSSILSPLCEDA 184

Query: 193  DSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSPSSGCPEVRSSIPGD 252
            DSG     +    + AH        GN                             + G 
Sbjct: 185  DSG-----NRDGWTSAH--------GN----------------------------RVKGS 203

Query: 253  YVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKL------------ 300
                +G +P                 +W+   E+      N+P +A L            
Sbjct: 204  NSQRSGDVP-----------------AWDASFENSLARYQNLPYNAPLTQTQPSTFGLIP 246

Query: 301  -ESNVQKENIFDGELLSREASEENSGSSLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPA 359
             E   +K     G LL+ E       S  PVQ +  +PL        K  MD    +  A
Sbjct: 247  MEGKTEK-----GSLLTSEHLRNPLQSQTPVQES--VPLQ-------KWPMDSHSGMTDA 292

Query: 360  YDLGDGLFEQRTHD-----ACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQTKS 414
             DL   LF Q  H+     + LLG+            + P  NN        E+    K 
Sbjct: 293  TDL--ALFGQGAHENFGTFSSLLGS----QDQQSSSFQAPFTNN--------EAAYIPKL 338

Query: 415  NSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS--GIEW 472
              E  I+ E + N +  +++ LL  E +L+KVDSFSRW+SKEL E+++L +QSS  GI W
Sbjct: 339  GPEDLIY-EASANQTLPLRKALLKKEDSLKKVDSFSRWVSKELGEMEDLQMQSSSGGIAW 397

Query: 473  STEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKW 532
            ++ EC N    SSLSPSLS+DQ F++IDF PKWT TD E+EV+V G FL S QEV    W
Sbjct: 398  TSVECENAAAGSSLSPSLSEDQRFTMIDFWPKWTQTDSEVEVMVIGTFLLSPQEVTSYSW 457

Query: 533  SCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDAD 592
            SCMF EVEVPA++L DGVLCC  PPH VGRVPFYITCS+R +CSEVREFD++ GS +  +
Sbjct: 458  SCMFGEVEVPADILVDGVLCCHAPPHEVGRVPFYITCSDRFSCSEVREFDFLPGSTRKLN 517

Query: 593  ISDIYGSSTSESFLHLRLERILSMRSSPQ-NHLSEGLCEKQKLISKIIQLKEEEESYQMV 651
             +DIYG++T E+ LHLR E +L++R S Q +H+ E + EK++ ISKI+ LK+E+E    +
Sbjct: 518  ATDIYGANTIETSLHLRFENLLALRCSVQEHHIFENVGEKRRKISKIMLLKDEKEP--PL 575

Query: 652  EANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGY 711
                EK+L++   K +++++  ++KLY WL+ KV E+GKGP ILD++GQGVLHLAA+LGY
Sbjct: 576  PGTIEKDLTELEAKERLIREEFEDKLYLWLIHKVTEEGKGPNILDEDGQGVLHLAAALGY 635

Query: 712  DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLS 771
            DWAIKP + AGVSINFRD +GW+ALHWAA+ GRE TVAVL+SLGA  G L DPSPE PL 
Sbjct: 636  DWAIKPILAAGVSINFRDANGWSALHWAAFSGREDTVAVLVSLGADAGALADPSPEHPLG 695

Query: 772  RTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATP 831
            +T +DLA  NGH+GISGFLAESSLTS L  L + D+ ++ + + S AKAV TV+E+TATP
Sbjct: 696  KTAADLAYGNGHRGISGFLAESSLTSYLEKLTV-DAKENSSADSSGAKAVLTVAERTATP 754

Query: 832  ANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEF--NNELGISYEHAL 889
             +  D  + LS+KDSLTA+ NATQAADR+HQ+FRMQSFQRKQL+E   +N+  IS E A+
Sbjct: 755  MSYGDVPETLSMKDSLTAVLNATQAADRLHQVFRMQSFQRKQLSELGGDNKFDISDELAV 814

Query: 890  SLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKY 949
            S  AAK+ +     G  H+AA+QIQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ RK+Y
Sbjct: 815  SFAAAKTKKSGHSSGAVHAAAVQIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRKQY 874

Query: 950  RPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEE 1009
            R IIWSVG+LEK+ILRWRRKGSGLRGF+RD +     P     +EDDYDFLK+GRKQTEE
Sbjct: 875  RAIIWSVGLLEKIILRWRRKGSGLRGFKRDTISKPTEPVCPAPQEDDYDFLKEGRKQTEE 934

Query: 1010 RLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETK-----ESNMVPNGLEDIADGDLD- 1063
            RLQKAL RVKSM QYPEARAQYRRLLTVVEG RE +      S+ + N  E+ A+ + + 
Sbjct: 935  RLQKALTRVKSMAQYPEARAQYRRLLTVVEGFRENEVTIASSSSALKNNTEEAANYNEED 994

Query: 1064 -LIDIDSLLDDDTFMSVAFE 1082
             LIDIDSLLDDDTFMS+AFE
Sbjct: 995  DLIDIDSLLDDDTFMSLAFE 1014

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297806971|ref|XP_002871369.1| calmodulin-binding transcription activator 1 [Arabidopsis lyrata subsp. lyrata] gi|297317206|gb|EFH47628.1| calmodulin-binding transcription activator 1 [Arabidopsis lyrata subsp. lyrata]

 Score = 1038 bits (2684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 576/1101 (52%), Positives = 721/1101 (65%), Gaps = 133/1101 (12%)

Query: 1    MADRGSYAL--APRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLF 58
            M DRGS+     P+LDM+QL  EAQHRWLRPAEICEIL NY KFHIASE P+RP SGSLF
Sbjct: 1    MVDRGSFGFISPPQLDMEQLLSEAQHRWLRPAEICEILQNYHKFHIASESPTRPASGSLF 60

Query: 59   LFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYW 118
            LFDRKVLRYFRKDGHNWRKKKDGKTV+EAHEKLKVGSVDVLHCYYAHGE NENFQRRCYW
Sbjct: 61   LFDRKVLRYFRKDGHNWRKKKDGKTVKEAHEKLKVGSVDVLHCYYAHGEGNENFQRRCYW 120

Query: 119  MLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITDS 178
            MLEQDLMHIVFVHYLEV+GN++++G +E+N  + N                 A   I  +
Sbjct: 121  MLEQDLMHIVFVHYLEVKGNRTSIGMKENNSNSVN---------------GTASVNIDST 165

Query: 179  TSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLSP 238
             SPTSTL+  CEDAD+G    DSHQASS      E PQ GN              Y  +P
Sbjct: 166  ASPTSTLSSLCEDADTG----DSHQASSVLRASSE-PQTGN-------------RYGWTP 207

Query: 239  SSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHA 298
            + G   V S + G+ V  +            + Q+ + + +W+ +    +  +D  P   
Sbjct: 208  APGMRNV-SQVHGNRVRES------------DSQRLVDVRAWDAIGNSVTRYHDQ-PYCN 253

Query: 299  KLESNVQKENIFDGELLSREASE------ENSGSSLPVQFNWQIPLADNSSHFLKSIMDL 352
             L + +Q  N  D  L+     +      E+  + L  Q NWQ     N+ +        
Sbjct: 254  NLLTQMQPSNT-DSMLVEENTDKGGRLKAEHIRNPLQTQLNWQ----QNAQYNF------ 302

Query: 353  SRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHSQT 412
                                        E F + L  +N+ P   + Q            
Sbjct: 303  ----------------------------ETFSSLLGSENQQPFGISYQA----------P 324

Query: 413  KSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS--GI 470
             S+ ESE            VK+ LL  E +L+KVDSFSRW SKEL E+++L +QSS   I
Sbjct: 325  PSSMESEF---------IPVKKSLLRSEESLKKVDSFSRWASKELGEMEDLQMQSSRGDI 375

Query: 471  EWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKC 530
             W+T EC       SLSPSLS+DQ F+I+DF PK   TD E+EV+V G FL S QEV K 
Sbjct: 376  AWTTVECETAAAGISLSPSLSEDQRFTIVDFWPKCAQTDAEVEVMVIGTFLLSPQEVTKY 435

Query: 531  KWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKD 590
             WSCMF EVEVPAE+L DGVLCC  PPH  G VPFY+TCSNR ACSEVREFD++ GS + 
Sbjct: 436  NWSCMFGEVEVPAEILVDGVLCCHAPPHTAGHVPFYVTCSNRFACSEVREFDFLSGSTQK 495

Query: 591  ADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEESYQ 649
             D +D+YG+ T+E+ L LR E++L+ R+   ++H+ +G+ EK++ ISKI+ LKEE+E   
Sbjct: 496  IDATDVYGTYTNEASLQLRFEKMLAHRNFVHEHHIFKGVGEKRRKISKIMSLKEEKE--Y 553

Query: 650  MVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASL 709
            ++    +++ ++   K Q+ ++  +E+LY WL+ KV E+GKGP ILD++GQG+LH  A+L
Sbjct: 554  LLPGTYQRDSTKQEPKEQLFREQSEEELYIWLIHKVTEEGKGPNILDEDGQGILHFVAAL 613

Query: 710  GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFP 769
            GYDWAIKP + AGV+INFRD +GW+ALHWAA+ GRE+TVAVL+SLGA  G LTDPSPE P
Sbjct: 614  GYDWAIKPMLAAGVNINFRDANGWSALHWAAFSGREETVAVLVSLGADAGALTDPSPELP 673

Query: 770  LSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTA 829
            L +T +DLA +NGH+GISGFLAESSLTS L  L + DS ++     S AKAVQTVSE+TA
Sbjct: 674  LGKTAADLAYANGHRGISGFLAESSLTSYLEKLTV-DSKENSPANSSGAKAVQTVSERTA 732

Query: 830  TPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNELGISYEH-- 887
             P +  D  + LSLKDSLTA+ NATQAADR+HQ+FRMQSFQRKQL++  ++  I      
Sbjct: 733  APMSYGDVPEKLSLKDSLTAVRNATQAADRLHQVFRMQSFQRKQLSDIGDDDKIDISDKL 792

Query: 888  ALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARK 947
            A+S    K+    QGD    SAA  IQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ RK
Sbjct: 793  AVSFATLKTKNLGQGDVSLSSAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQVRK 852

Query: 948  KYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQ--------HMPLKEDDYDF 999
            +YR +IWSVG+LEK+ILRWRRKG+GLRGF+R+A+     P+         +P +ED+YD+
Sbjct: 853  QYRTVIWSVGLLEKIILRWRRKGNGLRGFKRNAVAKTVEPEPPVSAICPTIP-QEDEYDY 911

Query: 1000 LKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESN--MVPNGLEDI 1057
            LK+GRKQTEERL+KAL RVKSMVQYPEAR QYRRLLTVVEG RE + S+   + N  ED 
Sbjct: 912  LKEGRKQTEERLEKALTRVKSMVQYPEARDQYRRLLTVVEGFRENEASSSASINNKEEDE 971

Query: 1058 ADGDLD-LIDIDSLLDDDTFM 1077
             + + D  IDIDSLL+DDT M
Sbjct: 972  VNCEEDEFIDIDSLLNDDTLM 992

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|186521534|ref|NP_001119195.1| calmodulin-binding transcription activator 1 [Arabidopsis thaliana] gi|341940364|sp|Q9FY74.2|CMTA1_ARATH RecName: Full=Calmodulin-binding transcription activator 1; AltName: Full=Ethylene-induced calmodulin-binding protein b; Short=EICBP.b; AltName: Full=Signal-responsive protein 2 gi|332004006|gb|AED91389.1| calmodulin-binding transcription activator 1 [Arabidopsis thaliana]

 Score = 1023 bits (2646), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 574/1103 (52%), Positives = 724/1103 (65%), Gaps = 127/1103 (11%)

Query: 1    MADRGSY-ALAP--RLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSL 57
            M DR S+ ++ P  +LDM+QL  EAQHRWLRP EICEIL NY KFHIASE P+RP SGSL
Sbjct: 1    MVDRRSFGSITPPLQLDMEQLLSEAQHRWLRPTEICEILQNYHKFHIASESPTRPASGSL 60

Query: 58   FLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCY 117
            FLFDRKVLRYFRKDGHNWRKKKDGKT+REAHEKLKVGS+DVLHCYYAHGE NENFQRRCY
Sbjct: 61   FLFDRKVLRYFRKDGHNWRKKKDGKTIREAHEKLKVGSIDVLHCYYAHGEANENFQRRCY 120

Query: 118  WMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNRTKAPSGITD 177
            WMLEQ LMHIVFVHYLEV+GN++++G +E+N  + N                 A   I  
Sbjct: 121  WMLEQHLMHIVFVHYLEVKGNRTSIGMKENNSNSVN---------------GTASVNIDS 165

Query: 178  STSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLSYSYFLS 237
            + SPTSTL+  CEDAD+G    DS QASS      E PQ GN              Y  +
Sbjct: 166  TASPTSTLSSLCEDADTG----DSQQASSVLRPSPE-PQTGN-------------RYGWT 207

Query: 238  PSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPH 297
            P+ G   V S + G+ V  +            + Q+ + + + + V    +  +D  P  
Sbjct: 208  PAPGMRNV-SQVHGNRVRES------------DSQRLVDVRALDTVGNSLTRFHDQ-PYC 253

Query: 298  AKLESNVQKENIFDGELLSREASE-------ENSGSSLPVQFNWQIPLADNSSHFLKSIM 350
              L + +Q  N     +L  E SE       E+  + L  QFNWQ    D++        
Sbjct: 254  NNLLTQMQPSNT--DSMLVEENSEKGGRLKAEHIRNPLQTQFNWQ----DDT-------- 299

Query: 351  DLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDVESHS 410
            DL+            LFEQ   D       E F + L  +N  P             S+ 
Sbjct: 300  DLA------------LFEQSAQDNF-----ETFSSLLGSENLQPFGI----------SYQ 332

Query: 411  QTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS-- 468
               SN +SE            V + L   E +L+KVDSFS+W  KEL E+++L +QSS  
Sbjct: 333  APPSNMDSEY---------MPVMKILRRSEDSLKKVDSFSKWAIKELGEMEDLQMQSSRG 383

Query: 469  GIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVA 528
             I W+T EC       SLSPSLS+DQ F+I+DF PK   TD E+EV+V G FL S QEV 
Sbjct: 384  DIAWTTVECETAAAGISLSPSLSEDQRFTIVDFWPKSAKTDAEVEVMVIGTFLLSPQEVT 443

Query: 529  KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSV 588
            K  WSCMF EVEVPAE+L DGVLCC  PPH  G VPFY+TCSNR ACSEVREFD++ GS 
Sbjct: 444  KYNWSCMFGEVEVPAEILVDGVLCCHAPPHTAGHVPFYVTCSNRFACSEVREFDFLSGST 503

Query: 589  KDADISDIYGSSTSESFLHLRLERILSMRS-SPQNHLSEGLCEKQKLISKIIQLKEEEES 647
            +  + +D+YG+ T+E+ L LR E++L+ R    ++H+ E + +K++ ISKI+ LKEE+E 
Sbjct: 504  QKINATDVYGTYTNEASLQLRFEKMLAHRDFVHEHHIFEDVGDKRRQISKIMLLKEEKE- 562

Query: 648  YQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAA 707
              ++    +++ ++   K Q+ +++ +E+LY WL+ KV E+GKGP ILD++GQG+LH  A
Sbjct: 563  -YLLPGTYQRDSTKQEPKGQLFRELFEEELYIWLIHKVTEEGKGPNILDEDGQGILHFVA 621

Query: 708  SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE 767
            +LGYDWAIKP + AGV+INFRD +GW+ALHWAA+ GRE+TVAVL+SLGA  G LTDPSPE
Sbjct: 622  ALGYDWAIKPVLAAGVNINFRDANGWSALHWAAFSGREETVAVLVSLGADAGALTDPSPE 681

Query: 768  FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEK 827
             PL +T +DLA +NGH+GISGFLAESSLTS L  L + DS ++        KAVQTVSE+
Sbjct: 682  LPLGKTAADLAYANGHRGISGFLAESSLTSYLEKLTV-DSKENSPANSCGEKAVQTVSER 740

Query: 828  TATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTEFNNE--LGISY 885
            TA P    D  + LSLKDSLTA+ NATQAADR+HQ+FRMQSFQRKQL +  ++  + IS 
Sbjct: 741  TAAPMTYGDVPEKLSLKDSLTAVRNATQAADRLHQVFRMQSFQRKQLCDIGDDEKIDISD 800

Query: 886  EHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQA 945
            + A+S  A+K+  P QGD     AA  IQKK+RGWKKRKEFLLIRQRIVKIQAHVRGHQ 
Sbjct: 801  QLAVSFAASKTKNPGQGDVSLSCAATHIQKKYRGWKKRKEFLLIRQRIVKIQAHVRGHQV 860

Query: 946  RKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQ--------HMPLKEDDY 997
            RK+YR +IWSVG+LEK+ILRWRRKG+GLRGF+R+A+     P+         +P +ED+Y
Sbjct: 861  RKQYRTVIWSVGLLEKIILRWRRKGNGLRGFKRNAVAKTVEPEPPVSAICPRIP-QEDEY 919

Query: 998  DFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKESN--MVPNGLE 1055
            D+LK+GRKQTEERLQKAL RVKSMVQYPEAR QYRRLLTVVEG RE + S+   + N  E
Sbjct: 920  DYLKEGRKQTEERLQKALTRVKSMVQYPEARDQYRRLLTVVEGFRENEASSSASINNKEE 979

Query: 1056 DIADGDL-DLIDIDSLLDDDTFM 1077
            +  + +  D IDI+SLL+DDT M
Sbjct: 980  EAVNCEEDDFIDIESLLNDDTLM 1002

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	1082
TAIR|locus:2173368	1050	AT5G64220 [Arabidopsis thalian	0.736	0.759	0.496	3e-269
TAIR|locus:2060405	1032	SR1 "signal responsive 1" [Ara	0.356	0.374	0.428	7.6e-210
TAIR|locus:2019534	1016	AT1G67310 [Arabidopsis thalian	0.476	0.507	0.375	8.2e-128
TAIR|locus:2130125	923	AT4G16150 [Arabidopsis thalian	0.526	0.617	0.327	7.8e-114
UNIPROTKB|Q9Y6Y1	1673	CAMTA1 "Calmodulin-binding tra	0.101	0.065	0.452	5.4e-30
MGI|MGI:2140230	1682	Camta1 "calmodulin binding tra	0.101	0.065	0.452	4.5e-29
UNIPROTKB|F1P8J0	1204	CAMTA2 "Uncharacterized protei	0.099	0.089	0.442	6.1e-29
UNIPROTKB|J9NZ90	1214	CAMTA2 "Uncharacterized protei	0.099	0.088	0.442	6.4e-29
UNIPROTKB|F1RFY4	1201	CAMTA2 "Uncharacterized protei	0.099	0.089	0.442	2.5e-28
UNIPROTKB|O94983	1202	CAMTA2 "Calmodulin-binding tra	0.099	0.089	0.442	3.2e-28

TAIR|locus:2173368 AT5G64220 [Arabidopsis thaliana (taxid:3702)]

 Score = 1893 (671.4 bits), Expect = 3.0e-269, Sum P(2) = 3.0e-269
 Identities = 409/824 (49%), Positives = 529/824 (64%)

Query:   272 QKALGLASWEEVLEHCSGENDNVPPHAKL-ESNVQKENIFDGELLSREAS---EENSGSS 327
             Q++  + +W+   E+      N+P +A L ++      +   E  + + S    E+  + 
Sbjct:   241 QRSGDVPAWDASFENSLARYQNLPYNAPLTQTQPSTFGLIPMEGKTEKGSLLTSEHLRNP 300

Query:   328 LPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFL 387
             L  Q NWQ P+ + S    K  MD    +  A DL   LF Q  H+    G    F + L
Sbjct:   301 LQSQVNWQTPVQE-SVPLQKWPMDSHSGMTDATDLA--LFGQGAHEN--FGT---FSSLL 352

Query:   388 DQQNELPVQNNLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVD 447
               Q++    ++ Q    + E+    K   E  I+ E + N +  +++ LL  E +L+KVD
Sbjct:   353 GSQDQQ--SSSFQAPFTNNEAAYIPKLGPEDLIY-EASANQTLPLRKALLKKEDSLKKVD 409

Query:   448 SFSRWMSKELEEVDNLHVQSS--GIEWSTEECGNVVXXXXXXXXXXXXXXXXIIDFSPKW 505
             SFSRW+SKEL E+++L +QSS  GI W++ EC N                  +IDF PKW
Sbjct:   410 SFSRWVSKELGEMEDLQMQSSSGGIAWTSVECENAAAGSSLSPSLSEDQRFTMIDFWPKW 469

Query:   506 TYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPF 565
             T TD E+EV+V G FL S QEV    WSCMF EVEVPA++L DGVLCC  PPH VGRVPF
Sbjct:   470 TQTDSEVEVMVIGTFLLSPQEVTSYSWSCMFGEVEVPADILVDGVLCCHAPPHEVGRVPF 529

Query:   566 YITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQ-NHL 624
             YITCS+R +CSEVREFD++ GS +  + +DIYG++T E+ LHLR E +L++R S Q +H+
Sbjct:   530 YITCSDRFSCSEVREFDFLPGSTRKLNATDIYGANTIETSLHLRFENLLALRCSVQEHHI 589

Query:   625 SEGLCXXXXXXXXXXXXXXXXXXYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK 684
              E +                      +    EK+L++   K +++++  ++KLY WL+ K
Sbjct:   590 FENV--GEKRRKISKIMLLKDEKEPPLPGTIEKDLTELEAKERLIREEFEDKLYLWLIHK 647

Query:   685 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR 744
             V E+GKGP ILD++GQGVLHLAA+LGYDWAIKP + AGVSINFRD +GW+ALHWAA+ GR
Sbjct:   648 VTEEGKGPNILDEDGQGVLHLAAALGYDWAIKPILAAGVSINFRDANGWSALHWAAFSGR 707

Query:   745 EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAEXXXXXXXXXXKM 804
             E TVAVL+SLGA  G L DPSPE PL +T +DLA  NGH+GISGFLAE           +
Sbjct:   708 EDTVAVLVSLGADAGALADPSPEHPLGKTAADLAYGNGHRGISGFLAESSLTSYLEKLTV 767

Query:   805 NDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIF 864
              D+ ++ + + S AKAV TV+E+TATP +  D  + LS+KDSLTA+ NATQAADR+HQ+F
Sbjct:   768 -DAKENSSADSSGAKAVLTVAERTATPMSYGDVPETLSMKDSLTAVLNATQAADRLHQVF 826

Query:   865 RMQSFQRKQLTEF--NNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKK 922
             RMQSFQRKQL+E   +N+  IS E A+S  AAK+ +     G  H+AA+QIQKK+RGWKK
Sbjct:   827 RMQSFQRKQLSELGGDNKFDISDELAVSFAAAKTKKSGHSSGAVHAAAVQIQKKYRGWKK 886

Query:   923 RKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDALG 982
             RKEFLLIRQRIVKIQAHVRGHQ RK+YR IIWSVG+LEK+ILRWRRKGSGLRGF+RD + 
Sbjct:   887 RKEFLLIRQRIVKIQAHVRGHQVRKQYRAIIWSVGLLEKIILRWRRKGSGLRGFKRDTIS 946

Query:   983 MNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSR 1042
                 P     +EDDYDFLK+GRKQTEERLQKAL RVKSM QYPEARAQYRRLLTVVEG R
Sbjct:   947 KPTEPVCPAPQEDDYDFLKEGRKQTEERLQKALTRVKSMAQYPEARAQYRRLLTVVEGFR 1006

Query:  1043 ETK--ESNMVPNGXXXXXXXXXXXXXXXXXXXXX--TFMSVAFE 1082
             E +   S+ + N                        TFMS+AFE
Sbjct:  1007 ENEASSSSALKNNTEEAANYNEEDDLIDIDSLLDDDTFMSLAFE 1050

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2060405 SR1 "signal responsive 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 806 (288.8 bits), Expect = 7.6e-210, Sum P(3) = 7.6e-210
 Identities = 177/413 (42%), Positives = 243/413 (58%)

Query:   415 NSESEIHGEGTINFSFSVKQKLLNG---EGNLEKVDSFSRWMSKELEEV-------DNLH 464
             N+ S +       +  ++KQ LL+G   E  L+K+DSF+RWMSKEL +V       ++  
Sbjct:   363 NAISNLASNEKAPYLSTMKQHLLHGALGEEGLKKMDSFNRWMSKELGDVGVIADANESFT 422

Query:   465 VQSSGIEWS---TEECGNV------VXXXXXXXXXXXXXXXXIIDFSPKWTYTDPEIEVV 515
               SS   W    +E+  N       +                I DFSP W Y   E+ V 
Sbjct:   423 QSSSRTYWEEVESEDGSNGHNSRRDMDGYVMSPSLSKEQLFSINDFSPSWAYVGCEVVVF 482

Query:   516 VTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLAC 575
             VTG FLK+ +E    +WSCMF + EVPA+V+++G+L C  P H  GRVPFY+TCSNRLAC
Sbjct:   483 VTGKFLKTREETEIGEWSCMFGQTEVPADVISNGILQCVAPMHEAGRVPFYVTCSNRLAC 542

Query:   576 SEVREFDYIVGS--VKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCXXXX 633
             SEVREF+Y V    V D +  D    ST +  L  R  ++L  +S   + +S G      
Sbjct:   543 SEVREFEYKVAESQVFDREADD---ESTID-ILEARFVKLLCSKSENTSPVS-GNDSDLS 597

Query:   634 XXXXXXXXXXXXXXYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPC 693
                            Q+ +    + +SQ   K  +LQ+ +KE L+SWLL+K+ E GKGP 
Sbjct:   598 QLSEKISLLLFENDDQLDQMLMNE-ISQENMKNNLLQEFLKESLHSWLLQKIAEGGKGPS 656

Query:   694 ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 753
             +LD+ GQGVLH AASLGY+WA++PT+ AGVS++FRD++GWTALHWAA+ GRE+ +  L++
Sbjct:   657 VLDEGGQGVLHFAASLGYNWALEPTIIAGVSVDFRDVNGWTALHWAAFFGRERIIGSLIA 716

Query:   754 LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAEXXXXXXXXXXKMND 806
             LGAAPG LTDP+P+FP   TPSDLA +NGHKGI+G+L+E           +ND
Sbjct:   717 LGAAPGTLTDPNPDFPSGSTPSDLAYANGHKGIAGYLSEYALRAHVSLLSLND 769

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=TAS;IPI

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0042742 "defense response to bacterium" evidence=IGI;IMP

GO:0010150 "leaf senescence" evidence=IMP

GO:0050832 "defense response to fungus" evidence=IGI

TAIR|locus:2019534 AT1G67310 [Arabidopsis thaliana (taxid:3702)]

 Score = 870 (311.3 bits), Expect = 8.2e-128, Sum P(3) = 8.2e-128
 Identities = 207/552 (37%), Positives = 307/552 (55%)

Query:   498 IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP 557
             I D SP W Y +   +V++ G FL    E     WSCMF   +VP E++ +GV+ C  P 
Sbjct:   448 IQDISPDWGYANETTKVIIIGSFLCDPTEST---WSCMFGNAQVPFEIIKEGVIRCEAPQ 504

Query:   558 HAVGRVPFYITCSNRLACSEVREFDY------IVGSVKDADISDIYGSSTSESFLHLR-L 610
                G+V   IT  + L CSE+REF+Y            +   SD+  +S +E  L +R +
Sbjct:   505 CGPGKVNLCITSGDGLLCSEIREFEYREKPDTCCPKCSEPQTSDM-STSPNELILLVRFV 563

Query:   611 ERILSMRSSPQNHLSEGLCXXXXXXXXXXXXXXXXXXYQMVEANPEKNLSQHVEKYQILQ 670
             + +LS RSS +    E                       +++ +     +  V+   +LQ
Sbjct:   564 QTLLSDRSSERKSNLESGNDKLLTKLKADDDQWRHVIGTIIDGSASSTST--VD--WLLQ 619

Query:   671 KIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL 730
             +++K+KL +WL  + C++    C L  + QG++H+ A LG++WA  P +  GV+++FRD+
Sbjct:   620 ELLKDKLDTWLSSRSCDEDYITCSLSKQEQGIIHMVAGLGFEWAFYPILAHGVNVDFRDI 679

Query:   731 SGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
              GW+ALHWAA  G EK VA L++ GA+ G +TDPS + P  +T + +A+SNGHKG++G+L
Sbjct:   680 KGWSALHWAAQFGSEKMVAALIASGASAGAVTDPSRQDPNGKTAASIAASNGHKGLAGYL 739

Query:   791 AEXXXXXXXXXXKMNDSADD-GALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTA 849
             +E           + ++ +     +    K + ++SE++  P+ + D+   +SLKD+L A
Sbjct:   740 SEVALTNHLSSLTLEETENSKDTAQVQTEKTLNSISEQS--PSGNEDQ---VSLKDTLAA 794

Query:   850 ICNATQAADRIHQIFRMQSFQ-RKQ----LTEFNNELGISYEHALSLVAAKSLRPVQGDG 904
             + NA QAA RI   FR  SF+ RKQ    L     E G+  E    + A   L   +G  
Sbjct:   795 VRNAAQAAARIQAAFRAHSFRKRKQREAALVACLQEYGMYCEDIEGISAMSKLTFGKGRN 854

Query:   905 LAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVIL 964
               +SAA+ IQK FRG+K RK FL +RQ++VKIQAHVRG+Q RK Y+ I W+V IL+KV+L
Sbjct:   855 Y-NSAALSIQKNFRGYKDRKCFLELRQKVVKIQAHVRGYQIRKNYKVICWAVRILDKVVL 913

Query:   965 RWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQ-TEERLQKALGRVKSMVQ 1023
             RWRRKG GLRGFR+D      +        +D D LK  RKQ  +  + +A  RV SM  
Sbjct:   914 RWRRKGVGLRGFRQDVESTEDS--------EDEDILKVFRKQKVDVAVNEAFSRVLSMSN 965

Query:  1024 YPEARAQYRRLL 1035
              PEAR QY R+L
Sbjct:   966 SPEARQQYHRVL 977

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0005829 "cytosol" evidence=IDA

TAIR|locus:2130125 AT4G16150 [Arabidopsis thaliana (taxid:3702)]

 Score = 732 (262.7 bits), Expect = 7.8e-114, Sum P(2) = 7.8e-114
 Identities = 201/613 (32%), Positives = 305/613 (49%)

Query:   436 LLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSSGIE--WSTEECGNVVXXXXXXXXXXXX 493
             L NG G+    DSF RW++  + +     V    +E  ++  +  +              
Sbjct:   315 LNNGYGSQ---DSFGRWVNNFISDSPG-SVDDPSLEAVYTPGQDSSTPPTVFHSHSDIPE 370

Query:   494 XXXXIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCC 553
                 I D SP W Y+  + +++VTG F  S Q + +    C+  E+ VPAE L  GV  C
Sbjct:   371 QVFNITDVSPAWAYSTEKTKILVTGFFHDSFQHLGRSNLICICGELRVPAEFLQMGVYRC 430

Query:   554 RIPPHAVGRVPFYITCSNRLACSEVREFDY-IVGSVKDADISDIYGSSTSESFLHLRLER 612
              +PP + G V  Y++       S++  F++  V  ++ A   D       E    +RL  
Sbjct:   431 FLPPQSPGVVNLYLSVDGNKPISQLFSFEHRSVQFIEKAIPQDDQLYKWEEFEFQVRLAH 490

Query:   613 ILSMRSSPQNHLSEGLC----XXXXXXXXXXXXXXXXXXYQM--VEANPEKNLSQHVEKY 666
             +L   S+  + L+  +                       Y M  ++AN E    Q   + 
Sbjct:   491 LLFTSSNKISVLTSKISPENLLEAKKLASRTSHLLNSWAYLMKSIQAN-EVPFDQ--ARD 547

Query:   667 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSIN 726
              + +  +K +L  WLL KV E+ +     D +G GV+HL A LGY W+I     A +S++
Sbjct:   548 HLFELTLKNRLKEWLLEKVIEN-RNTKEYDSKGLGVIHLCAVLGYTWSILLFSWANISLD 606

Query:   727 FRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
             FRD  GWTALHWAAY GREK VA LLS GA P L+TDP+ EF    T +DLA   G+ G+
Sbjct:   607 FRDKQGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTKEFLGGCTAADLAQQKGYDGL 666

Query:   787 SGFLAEXXXXXXXXXXKMNDSADDGALEDSIAKAVQTV-SEKTATPANDNDESDVLSLKD 845
             + FLAE          +  D    G    +I+  ++T+ +EK++ P N N+E    SLKD
Sbjct:   667 AAFLAEKCLVA-----QFKDMQTAG----NISGNLETIKAEKSSNPGNANEEEQ--SLKD 715

Query:   846 SLTAICNATQAADRIHQIFRMQSFQ-RKQLTEFNNELGISYEHALSLVAAKSLRPVQGDG 904
             +L A   A +AA RI   FR    + R     F ++     E A +++AA  ++    + 
Sbjct:   716 TLAAYRTAAEAAARIQGAFREHELKVRSSAVRFASK----EEEAKNIIAAMKIQHAFRNF 771

Query:   905 LAH---SAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEK 961
                   +AA +IQ +F+ WK R+EFL +R++ ++IQA  RG Q R++Y+ I WSVG+LEK
Sbjct:   772 EVRRKIAAAARIQYRFQTWKMRREFLNMRKKAIRIQAAFRGFQVRRQYQKITWSVGVLEK 831

Query:   962 VILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSM 1021
              ILRWR K  G RG +         P      E   DF K  +KQ EERL++++ +V++M
Sbjct:   832 AILRWRLKRKGFRGLQVS------QPDEKEGSEAVEDFYKTSQKQAEERLERSVVKVQAM 885

Query:  1022 VQYPEARAQYRRL 1034
              +  +A+  YRR+
Sbjct:   886 FRSKKAQQDYRRM 898

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IEA

GO:0005516 "calmodulin binding" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

UNIPROTKB|Q9Y6Y1 CAMTA1 "Calmodulin-binding transcription activator 1" [Homo sapiens (taxid:9606)]

 Score = 262 (97.3 bits), Expect = 5.4e-30, Sum P(5) = 5.4e-30
 Identities = 52/115 (45%), Positives = 71/115 (61%)

Query:    23 QHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
             +HRW    EI   L  ++K    + + P +RP +GS+ L++RK ++Y RKDG+ W+K+KD
Sbjct:    71 RHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWKKRKD 129

Query:    81 GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             GKT RE H KLKV  V+ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:   130 GKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

MGI|MGI:2140230 Camta1 "calmodulin binding transcription activator 1" [Mus musculus (taxid:10090)]

 Score = 262 (97.3 bits), Expect = 4.5e-29, Sum P(5) = 4.5e-29
 Identities = 52/115 (45%), Positives = 71/115 (61%)

Query:    23 QHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
             +HRW    EI   L  ++K    + + P +RP +GS+ L++RK ++Y RKDG+ W+K+KD
Sbjct:    71 RHRWNTNEEIAAYLITFEKHEEWLTTSPKTRPQNGSMILYNRKKVKY-RKDGYCWKKRKD 129

Query:    81 GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             GKT RE H KLKV  V+ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:   130 GKTTREDHMKLKVQGVECLYGCYVHSSIIPTFHRRCYWLLQNP--DIVLVHYLNV 182

GO:0003674 "molecular_function" evidence=ND

GO:0003677 "DNA binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F1P8J0 CAMTA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 248 (92.4 bits), Expect = 6.1e-29, Sum P(4) = 6.1e-29
 Identities = 50/113 (44%), Positives = 69/113 (61%)

Query:    25 RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query:    83 TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:    99 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|J9NZ90 CAMTA2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 248 (92.4 bits), Expect = 6.4e-29, Sum P(4) = 6.4e-29
 Identities = 50/113 (44%), Positives = 69/113 (61%)

Query:    25 RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    63 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 121

Query:    83 TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:   122 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 172

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|F1RFY4 CAMTA2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 248 (92.4 bits), Expect = 2.5e-28, Sum P(4) = 2.5e-28
 Identities = 50/113 (44%), Positives = 69/113 (61%)

Query:    25 RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query:    83 TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:    99 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

GO:0005634 "nucleus" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|O94983 CAMTA2 "Calmodulin-binding transcription activator 2" [Homo sapiens (taxid:9606)]

 Score = 248 (92.4 bits), Expect = 3.2e-28, Sum P(4) = 3.2e-28
 Identities = 50/113 (44%), Positives = 69/113 (61%)

Query:    25 RWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGK 82
             RW    EI   L  ++K    ++  P +RP +GS+ L++RK ++Y RKDG+ W+K+KDGK
Sbjct:    40 RWNTNEEIASYLITFEKHDEWLSCAPKTRPQNGSIILYNRKKVKY-RKDGYLWKKRKDGK 98

Query:    83 TVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEV 135
             T RE H KLKV  ++ L+  Y H      F RRCYW+L+     IV VHYL V
Sbjct:    99 TTREDHMKLKVQGMECLYGCYVHSSIVPTFHRRCYWLLQNP--DIVLVHYLNV 149

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003682 "chromatin binding" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0008134 "transcription factor binding" evidence=IGI

GO:0014898 "cardiac muscle hypertrophy in response to stress" evidence=IDA

GO:0042826 "histone deacetylase binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IGI

GO:0005515 "protein binding" evidence=IPI

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6NPP4	CMTA2_ARATH	No assigned EC number	0.5464	0.9454	0.9742	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: scaffold_803130.1 annotation not avaliable (1062 aa) (Arabidopsis lyrata)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	1082
pfam03859	119	pfam03859, CG-1, CG-1 domain	2e-71
smart01076	118	smart01076, CG-1, CG-1 domains are highly conserve	6e-65
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	3e-12
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	9e-12
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-10
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	5e-07
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-07
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-06
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-05
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-05
pfam00612	21	pfam00612, IQ, IQ calmodulin-binding motif	6e-05
smart00015	23	smart00015, IQ, Calmodulin-binding motif	6e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	7e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	9e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	6e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.002
pfam01833	84	pfam01833, TIG, IPT/TIG domain	0.002
COG5022	1463	COG5022, COG5022, Myosin heavy chain [Cytoskeleton	0.003

>gnl|CDD|217766 pfam03859, CG-1, CG-1 domain

 Score =  232 bits (593), Expect = 2e-71
 Identities = 85/116 (73%), Positives = 100/116 (86%)

Query: 21  EAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKD 80
           EA+ RWLRP EI  IL N++K  I  EPP+RPPSGSLFL++RKV+RYFRKDG+NW+KKKD
Sbjct: 4   EAKSRWLRPEEIYAILQNFEKHFITLEPPTRPPSGSLFLYNRKVVRYFRKDGYNWKKKKD 63

Query: 81  GKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQ 136
           GKT REAHEKLKVG V+VL+CYYAHGEDN  FQRRCYW+L++DL HIV VHYL V+
Sbjct: 64  GKTTREAHEKLKVGGVEVLNCYYAHGEDNPTFQRRCYWLLDEDLEHIVLVHYLNVK 119

CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs. Length = 119

>gnl|CDD|198144 smart01076, CG-1, CG-1 domains are highly conserved domains of about 130 amino-acid residues

 Score =  214 bits (546), Expect = 6e-65
 Identities = 75/118 (63%), Positives = 87/118 (73%), Gaps = 4/118 (3%)

Query: 21  EAQHRWLRPAEICEILCNYQKFH--IASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKK 78
           EA+HRWL P EI  IL N+ K    + + PP+RP SGSLFLF+RK L+YFRKDG+NW+KK
Sbjct: 3   EAKHRWLTPEEIAAILINFDKHTEWLTTSPPTRPKSGSLFLFNRKKLKYFRKDGYNWKKK 62

Query: 79  KDGKTVREAHEKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQ 136
           KDGKTVRE HEKLKVG ++ LHCYYAH E N  F RRCYW+L      IV VHYL V 
Sbjct: 63  KDGKTVREDHEKLKVGGIECLHCYYAHSEINPTFHRRCYWLL--QNPDIVLVHYLNVP 118

The domains contain a predicted bipartite NLS and are named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs. Length = 118

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 64.3 bits (157), Expect = 3e-12
 Identities = 36/104 (34%), Positives = 47/104 (45%), Gaps = 6/104 (5%)

Query: 687 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 746
           E+G      D++G+  LHLAA  G+   +K  +  G  +N RD  G T LH AA  G   
Sbjct: 28  ENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLD 87

Query: 747 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            V +LL  GA               RTP  LA+ NGH  +   L
Sbjct: 88  VVKLLLKHGADVNARDK------DGRTPLHLAAKNGHLEVVKLL 125

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 62.8 bits (153), Expect = 9e-12
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 6/93 (6%)

Query: 694 ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 753
             D++G+  LHLAAS G+   +K  +  G  +N +D  G T LH AA  G  + V +LL 
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 754 LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
            GA                TP  LA+ NG+  +
Sbjct: 62  KGADVNARDK------DGNTPLHLAARNGNLDV 88

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.9 bits (138), Expect = 5e-10
 Identities = 25/67 (37%), Positives = 33/67 (49%)

Query: 690 KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA 749
           KG  +   +    LHLAA  G    +K  +  G  +N +D  G TALH AA  G  + V 
Sbjct: 19  KGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVK 78

Query: 750 VLLSLGA 756
           +LL  GA
Sbjct: 79  LLLEHGA 85

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 51.7 bits (123), Expect = 5e-07
 Identities = 38/130 (29%), Positives = 47/130 (36%), Gaps = 14/130 (10%)

Query: 687 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT-------AGVSINFR-DLSGWTALHW 738
             G      D +G   LHLAA  G        V        A + +N   D  G T LHW
Sbjct: 94  ASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHW 153

Query: 739 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL 798
           AA  G    V +LL  GA      DP+       T  D A+ NG   +   L +  L   
Sbjct: 154 AALNGDADIVELLLEAGA------DPNSRNSYGVTALDPAAKNGRIELVKLLLDKGLHLS 207

Query: 799 LLSLKMNDSA 808
           LL   +   A
Sbjct: 208 LLKFNLEGVA 217

Length = 235

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 53.1 bits (128), Expect = 6e-07
 Identities = 34/127 (26%), Positives = 53/127 (41%), Gaps = 17/127 (13%)

Query: 659 LSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIK-- 716
           L  H++ ++   +I++E     L+R  C     P   D  G   LH  A+          
Sbjct: 191 LHHHLQSFKPRARIVRE-----LIRAGC----DPAATDMLGNTPLHSMATGSSCKRSLVL 241

Query: 717 PTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSD 776
           P + AG+SIN R+  G T LH+AA     +    L++LGA    ++          TP  
Sbjct: 242 PLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADINAVS------SDGNTPLS 295

Query: 777 LASSNGH 783
           L   N +
Sbjct: 296 LMVRNNN 302

Length = 471

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 47.8 bits (114), Expect = 2e-06
 Identities = 25/75 (33%), Positives = 32/75 (42%), Gaps = 8/75 (10%)

Query: 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALH 737
           ++ + E G      D +G   LHLAA  G        V      G  +N RD  G T LH
Sbjct: 56  VKLLLEKGADVNARDKDGNTPLHLAARNGN----LDVVKLLLKHGADVNARDKDGRTPLH 111

Query: 738 WAAYCGREKTVAVLL 752
            AA  G  + V +LL
Sbjct: 112 LAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 44.6 bits (106), Expect = 1e-05
 Identities = 29/84 (34%), Positives = 38/84 (45%), Gaps = 8/84 (9%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762
           LHLAA  G    +K  +  G  +N  D    TALH AA  G  + V +LL  GA      
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGD--TDTALHLAARNGNLEIVKLLLEHGA------ 52

Query: 763 DPSPEFPLSRTPSDLASSNGHKGI 786
           D + +     T   LA+ NG+  I
Sbjct: 53  DVNAKDKDGNTALHLAARNGNLEI 76

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 44.7 bits (106), Expect = 2e-05
 Identities = 25/61 (40%), Positives = 28/61 (45%), Gaps = 6/61 (9%)

Query: 726 NFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKG 785
           N RD  G T LH AA  G  + V +LL  GA      D        RTP  LA+ NGH  
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADV-NAKDND-----GRTPLHLAAKNGHLE 54

Query: 786 I 786
           I
Sbjct: 55  I 55

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|201341 pfam00612, IQ, IQ calmodulin-binding motif

 Score = 40.4 bits (96), Expect = 6e-05
 Identities = 11/21 (52%), Positives = 16/21 (76%)

Query: 930 RQRIVKIQAHVRGHQARKKYR 950
           R+  +KIQA  RG+ ARK+Y+
Sbjct: 1   RKAAIKIQAAWRGYLARKRYK 21

Calmodulin-binding motif. Length = 21

>gnl|CDD|197470 smart00015, IQ, Calmodulin-binding motif

 Score = 40.4 bits (96), Expect = 6e-05
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query: 929 IRQRIVKIQAHVRGHQARKKYR 950
           + +  + IQA  RG+ ARK+Y+
Sbjct: 2   LTRAAIIIQAAWRGYLARKRYK 23

Short calmodulin-binding motif containing conserved Ile and Gln residues. Length = 23

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 40.6 bits (96), Expect = 7e-05
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 732 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTD 763
           G T LH AA  G  + V +LL  GA       
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 40.7 bits (96), Expect = 9e-05
 Identities = 21/51 (41%), Positives = 26/51 (50%)

Query: 702 VLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL 752
            LH AA  G    +K  +  GV IN  D  G TALH AA  G  + + +LL
Sbjct: 4   ALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 43.3 bits (102), Expect = 6e-04
 Identities = 32/87 (36%), Positives = 39/87 (44%), Gaps = 7/87 (8%)

Query: 704 HLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTD 763
            LAAS G     +  +T G   N RD  G T LH A   G  + V VLL  GA P LL  
Sbjct: 88  QLAAS-GDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146

Query: 764 PSPEFPLSRTPSDLASSNGHKGISGFL 790
                   +TP +LA  NG + +   L
Sbjct: 147 D------GKTPLELAEENGFREVVQLL 167

Length = 664

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 732 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           G TALH AA  GR + V  LL  G       +         T   +A+ NG+  +   L
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDE------DGNTALHIAAENGNLEVLKLL 53

Length = 54

>gnl|CDD|216730 pfam01833, TIG, IPT/TIG domain

 Score = 38.2 bits (89), Expect = 0.002
 Identities = 20/87 (22%), Positives = 30/87 (34%), Gaps = 4/87 (4%)

Query: 497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIP 556
            I   SP          + +TG    +  E  K  +      V V    ++   + C  P
Sbjct: 2   VITSISPATGPASGGTTITITGSNFGTDSEDTKVTFGGTECTVIV---SVSSTQIVCTTP 58

Query: 557 PHAVGRVPFYITCSNRLACSEVREFDY 583
             A G V   +T +  L+ S V  F Y
Sbjct: 59  AGAAGTVSVSVTVNGGLSSSPVT-FTY 84

This family consists of a domain that has an immunoglobulin like fold. These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. CAUTION: This family does not currently recognise a significant number of members. Length = 84

>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton]

 Score = 41.2 bits (97), Expect = 0.003
 Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 10/130 (7%)

Query: 907  HSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRP-IIWSVGILEKVILR 965
             + A +IQ+  RG   R+ +L   +RI KIQ    G + R+     + W + I  + +L 
Sbjct: 745  DNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLS 804

Query: 966  WRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYP 1025
                  G R   R  L      Q    +E      K    +  E   KA   ++   +  
Sbjct: 805  ----LLGSRKEYRSYLACIIKLQKTIKRE-----KKLRETEEVEFSLKAEVLIQKFGRSL 855

Query: 1026 EARAQYRRLL 1035
            +A+ ++  L 
Sbjct: 856  KAKKRFSLLK 865

Length = 1463

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	1082
KOG0520	975	consensus Uncharacterized conserved protein, conta	100.0
PF03859	118	CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domain	100.0
PHA02946	446	ankyin-like protein; Provisional	99.97
PHA03095	471	ankyrin-like protein; Provisional	99.96
PHA02876	682	ankyrin repeat protein; Provisional	99.96
PHA02876	682	ankyrin repeat protein; Provisional	99.96
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.96
PHA02946	446	ankyin-like protein; Provisional	99.96
PHA03095	471	ankyrin-like protein; Provisional	99.96
PHA02874	434	ankyrin repeat protein; Provisional	99.96
PHA03100	480	ankyrin repeat protein; Provisional	99.96
PHA02878	477	ankyrin repeat protein; Provisional	99.96
PHA03100	480	ankyrin repeat protein; Provisional	99.95
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	99.95
KOG0510	929	consensus Ankyrin repeat protein [General function	99.95
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.94
PHA02875	413	ankyrin repeat protein; Provisional	99.94
PHA02791	284	ankyrin-like protein; Provisional	99.94
PHA02730	672	ankyrin-like protein; Provisional	99.94
PHA02989	494	ankyrin repeat protein; Provisional	99.94
PHA02874	434	ankyrin repeat protein; Provisional	99.94
PHA02917	661	ankyrin-like protein; Provisional	99.93
PHA02791	284	ankyrin-like protein; Provisional	99.93
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.93
PHA02989	494	ankyrin repeat protein; Provisional	99.93
PHA02798	489	ankyrin-like protein; Provisional	99.93
KOG0510	929	consensus Ankyrin repeat protein [General function	99.92
KOG4412	226	consensus 26S proteasome regulatory complex, subun	99.92
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.92
PHA02730	672	ankyrin-like protein; Provisional	99.92
PHA02875	413	ankyrin repeat protein; Provisional	99.92
KOG4177	1143	consensus Ankyrin [Cell wall/membrane/envelope bio	99.92
PHA02798	489	ankyrin-like protein; Provisional	99.91
PHA02878	477	ankyrin repeat protein; Provisional	99.91
PHA02917	661	ankyrin-like protein; Provisional	99.91
PHA02792	631	ankyrin-like protein; Provisional	99.88
KOG0509	600	consensus Ankyrin repeat and DHHC-type Zn-finger d	99.88
KOG0508	615	consensus Ankyrin repeat protein [General function	99.87
PHA02859	209	ankyrin repeat protein; Provisional	99.86
PHA02795	437	ankyrin-like protein; Provisional	99.85
KOG0508	615	consensus Ankyrin repeat protein [General function	99.84
PHA02859	209	ankyrin repeat protein; Provisional	99.84
PHA02795	437	ankyrin-like protein; Provisional	99.82
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.8
PHA02792	631	ankyrin-like protein; Provisional	99.78
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.77
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.77
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.77
PHA02743	166	Viral ankyrin protein; Provisional	99.76
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.76
KOG0502	296	consensus Integral membrane ankyrin-repeat protein	99.75
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.73
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.71
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.71
PHA02884	300	ankyrin repeat protein; Provisional	99.71
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.7
PHA02743	166	Viral ankyrin protein; Provisional	99.7
KOG4369	2131	consensus RTK signaling protein MASK/UNC-44 [Signa	99.69
KOG0514	452	consensus Ankyrin repeat protein [General function	99.69
PHA02741	169	hypothetical protein; Provisional	99.69
PHA02741	169	hypothetical protein; Provisional	99.68
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.66
KOG0505	527	consensus Myosin phosphatase, regulatory subunit [	99.64
PHA02884	300	ankyrin repeat protein; Provisional	99.62
KOG0507	854	consensus CASK-interacting adaptor protein (caskin	99.62
PHA02736	154	Viral ankyrin protein; Provisional	99.62
PHA02736	154	Viral ankyrin protein; Provisional	99.61
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.57
KOG0514	452	consensus Ankyrin repeat protein [General function	99.54
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.53
KOG0512	228	consensus Fetal globin-inducing factor (contains a	99.51
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.5
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.46
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.4
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.38
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.38
KOG0520	975	consensus Uncharacterized conserved protein, conta	99.36
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.31
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.3
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.26
KOG3676	782	consensus Ca2+-permeable cation channel OSM-9 and	99.26
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.24
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.24
KOG4214	117	consensus Myotrophin and similar proteins [Transcr	99.23
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.22
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.21
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.2
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.18
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.1
KOG0515	752	consensus p53-interacting protein 53BP/ASPP, conta	99.07
KOG1710	396	consensus MYND Zn-finger and ankyrin repeat protei	99.04
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.78
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.58
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	98.47
PF13606	30	Ank_3: Ankyrin repeat	98.35
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	98.35
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.26
KOG0783	1267	consensus Uncharacterized conserved protein, conta	98.25
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.24
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	98.2
KOG0818	669	consensus GTPase-activating proteins of the GIT fa	98.2
KOG0705	749	consensus GTPase-activating protein Centaurin gamm	98.19
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.16
PF13606	30	Ank_3: Ankyrin repeat	98.14
KOG0522	560	consensus Ankyrin repeat protein [General function	98.13
cd01175	85	IPT_COE IPT domain of the COE family (Col/Olf-1/EB	98.11
KOG0522	560	consensus Ankyrin repeat protein [General function	98.08
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	97.91
KOG0506	622	consensus Glutaminase (contains ankyrin repeat) [A	97.88
KOG2384	223	consensus Major histocompatibility complex protein	97.86
KOG0521	785	consensus Putative GTPase activating proteins (GAP	97.82
KOG0782	1004	consensus Predicted diacylglycerol kinase [Signal	97.68
KOG2384	223	consensus Major histocompatibility complex protein	97.58
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	97.55
KOG0511	516	consensus Ankyrin repeat protein [General function	97.53
KOG0511	516	consensus Ankyrin repeat protein [General function	97.35
KOG0160	862	consensus Myosin class V heavy chain [Cytoskeleton	97.29
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	97.0
KOG0521	785	consensus Putative GTPase activating proteins (GAP	96.97
COG5022	1463	Myosin heavy chain [Cytoskeleton]	96.89
PF00612	21	IQ: IQ calmodulin-binding motif; InterPro: IPR0000	96.62
PF01833	85	TIG: IPT/TIG domain; InterPro: IPR002909 This fami	96.41
cd01179	85	IPT_plexin_repeat2 Second repeat of the IPT domain	96.1
PTZ00014	821	myosin-A; Provisional	96.09
KOG0164	1001	consensus Myosin class I heavy chain [Cytoskeleton	96.06
cd00102	89	IPT Immunoglobulin-like fold, Plexins, Transcripti	96.04
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.82
PTZ00014	821	myosin-A; Provisional	95.75
smart00015	26	IQ Short calmodulin-binding motif containing conse	95.58
KOG3609	822	consensus Receptor-activated Ca2+-permeable cation	95.48
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	95.05
KOG2505	591	consensus Ankyrin repeat protein [General function	95.02
KOG2128	1401	consensus Ras GTPase-activating protein family - I	95.02
KOG2505	591	consensus Ankyrin repeat protein [General function	95.02
smart00015	26	IQ Short calmodulin-binding motif containing conse	94.88
cd00603	90	IPT_PCSR IPT domain of Plexins and Cell Surface Re	94.45
cd01180	94	IPT_plexin_repeat1 First repeat of the IPT domain	93.83
cd01181	99	IPT_plexin_repeat3 Third repeat of the IPT domain	92.56
COG5022	1463	Myosin heavy chain [Cytoskeleton]	92.49
smart00429	90	IPT ig-like, plexins, transcription factors.	91.71
PF08549	669	SWI-SNF_Ssr4: Fungal domain of unknown function (D	89.87

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=100.00  E-value=1.7e-126  Score=1142.43  Aligned_cols=942  Identities=41%  Similarity=0.629  Sum_probs=673.3

Q ss_pred             CCCcccHHHHHHHHHHhcCChHHHHHHHhcccceeecccCCCCCCCCcEEeeehhhhhhhhccCccceecCCCcchHhhh
Q 001410            9 LAPRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAH   88 (1082)
Q Consensus         9 ~~~~~d~~~~~~~~~~rw~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~l~~r~~~~~~r~dg~~w~~~~~~~~~~e~h   88 (1082)
                      ....||+..|+++|++|||+|+||+.||+||++|.|+.+||+||.|||+||||||+|||||||||+||||||||||||||
T Consensus        19 sl~~l~~~~ll~~~~~rWl~~~EI~~il~n~~~~~lt~~s~trp~sGS~flfnRk~lr~fRKDGh~WkKkkDGKtirEaH   98 (975)
T KOG0520|consen   19 SLQDLDIQTLLPEAKSRWLTPEEILAILINHEKFTLTVSSPTRPQSGSIFLFNRKVLRYFRKDGHNWKKKKDGKTIREAH   98 (975)
T ss_pred             hhhhhhhhhhhHHHHhccCChHHHHHHHhcccccccccCCCCCCCCCceeeeccHHHHHHhhcchhhhhcCCCCcChHHH
Confidence            34679999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcccCCEeeEEEEeecccCCcccceeeeecccCCCCceEEEEeeecCCCCCCCCCCCccccCCCCCCCCCCCccCCCCC
Q 001410           89 EKLKVGSVDVLHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQGNKSNVGDRESNEVTSNPGKHSSLTFSFPGNR  168 (1082)
Q Consensus        89 ~~lk~~~~~~~~~~y~~~~~~~~f~rr~y~~~~~~~~~ivlvhy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  168 (1082)
                      |||||||+|+||||||||+++|||||||||||++.++||||||||||++......+..+      ..++..+.   +.  
T Consensus        99 e~LKvg~~~~l~~~Y~Hg~~~ptF~RRcYwllq~~~~hIVLVHYl~v~~~~~~~~~~~~------~~~s~~sd---~~--  167 (975)
T KOG0520|consen   99 EKLKVGGVEVLHCYYAHGEINPTFQRRCYWLLQQELEHIVLVHYLNVKGNEDAAKGAGE------IFSSIISD---KA--  167 (975)
T ss_pred             HhhccCCccceeeeeecccccchHHHHHHHhhccccCceEEEEEeecccccccccCccc------cccccccc---cc--
Confidence            99999999999999999999999999999999999999999999999986642211111      01111110   00  


Q ss_pred             CCCCCCCCCCCCCCCC-cccccccccCCCCCCCccccccccccccc-CccCCCCCCcccCCCCCCccccCCCCCCCCCCC
Q 001410          169 TKAPSGITDSTSPTST-LTLSCEDADSGYDAEDSHQASSRAHLYYE-LPQMGNGPRMEKMDSGLSYSYFLSPSSGCPEVR  246 (1082)
Q Consensus       169 ~~~~~~~~~~~~~~~~-~~~~~e~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (1082)
                       ....+..+..+++.- +.+..|+++++    .++|.+..+-...+ ...+    .+.. +...+...|.......+...
T Consensus       168 -~S~~~~~~q~~~~~~~~~s~~~~v~~i----~s~~~~~~~g~~~~~s~~h----~i~~-~~~~s~~~~~~~p~s~~s~~  237 (975)
T KOG0520|consen  168 -WSLNQLAGQLSPIFHNHSSVNEDVAEI----NSNQTGNALGSVFGNSRNH----RIRL-HEVNSLDPLYKLPVSDDSLN  237 (975)
T ss_pred             -ccHHHhhcccCcchhcccchHHHHHHH----hhhccccccccccCcchhh----hhcc-cccCCccccccccccCCccc
Confidence             111222222222211 34557788776    33332222111111 0000    0000 11111111222222111111


Q ss_pred             CCCCCccccCCCCCCCCCcchhhhhhhcccccchHHHhhhcCCCCCCCCCCCccccccccccccccccccccccccccCC
Q 001410          247 SSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGENDNVPPHAKLESNVQKENIFDGELLSREASEENSGS  326 (1082)
Q Consensus       247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  326 (1082)
                      .     ..+.....+. ....+  .++..+...|.+.+++++.....   .+        +++               ++
T Consensus       238 ~-----~~~~~~~~~~-~~~~~--~~rs~~~s~~te~l~n~~~~~~~---~g--------~s~---------------s~  283 (975)
T KOG0520|consen  238 L-----SAPKPIDLPK-GPTSV--KQRSSSPSYFTEILGNAPSGLVS---QG--------NSL---------------SS  283 (975)
T ss_pred             c-----ccCCCccccc-CCcch--hhcCCCCcchhhhcccCCCcccc---cc--------ccc---------------cc
Confidence            0     1111000000 00001  12223344677777666521111   00        000               00


Q ss_pred             CCCcccccccccccCCcchhhhhhccccCCCcccccCCCcccccccccccCCCCCCcccccccccccccccchhhhcccc
Q 001410          327 SLPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFLDQQNELPVQNNLQMQQRDV  406 (1082)
Q Consensus       327 ~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  406 (1082)
                      ..+-...|+..  ++ +.+-.         ++...+..+    ++++     .+... .++++-    .+++        
T Consensus       284 ~l~~i~~~~~~--~~-~~~~~---------p~~~nf~~~----ss~~-----s~~~~-~~~g~g----~~~~--------  329 (975)
T KOG0520|consen  284 SLQRISSFTGL--DN-AAYEQ---------PNSQNFEPN----SSLN-----SHVTG-QSYGQG----LQAR--------  329 (975)
T ss_pred             chhhccccccc--cc-ccccC---------Ccccccccc----ccCC-----CCccc-cccCcc----ccCC--------
Confidence            00011122210  00 00000         000000000    0000     00000 000010    0000        


Q ss_pred             ccccccCCCCcccccCCcccccccccccccccCCCCCcccCCcchhhhhhhhhcccccccCC-CCcccccccCCccCCCC
Q 001410          407 ESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKELEEVDNLHVQSS-GIEWSTEECGNVVDDSS  485 (1082)
Q Consensus       407 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lkk~dSf~~wm~~~~~~~~~~~~~ss-~~~~~~~~~~~~~~~~~  485 (1082)
                             +++.  .  .+.++  .+...+.--..+++++.|||++||+ .|++..|+...++ +..|....+......+.
T Consensus       330 -------~~sa--~--~~~~P--~~~~~~~~~~~~~l~sgdsf~~~~~-t~~e~~d~~q~~s~~~~~~p~~~~~~~~~s~  395 (975)
T KOG0520|consen  330 -------SPSA--T--SESRP--ITSAADAALSELGLKSGDSFSRWAS-TFGEISDLGQDPSGEAVWTPENDPMGPPGSF  395 (975)
T ss_pred             -------Cccc--c--cccCC--cchhhccccccccccccccccchhh-hhcccccCCCCCccccccccCCCcCCCcccc
Confidence                   0000  0  00000  1111111111789999999999995 8998888774444 45787664433334456


Q ss_pred             CCCCccccCceEEEeecCCCCCCCCCeEEEEEcccccccccccccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhH
Q 001410          486 LSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPF  565 (1082)
Q Consensus       486 ~~~s~~~~q~fsI~d~sP~wa~~~ggtkVlI~G~~~~~~~~~~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPL  565 (1082)
                      ++||+. +|+|+|+||||+|+|++||+||+|+|++    .+.+..+|.||||+.+||++||+.||+||++|+|.+|.|+|
T Consensus       396 ~~~S~p-~qlf~I~DfSP~Wsy~~ggvKVlV~G~~----~~~~~~~ysc~Fg~~~VPAeliq~GVLrC~~P~h~~G~V~l  470 (975)
T KOG0520|consen  396 LSPSSP-EQLFTITDFSPEWSYLDGGVKVLVTGFP----QDETRSNYSCMFGEQRVPAELIQEGVLRCYAPPHEPGVVNL  470 (975)
T ss_pred             cCCCCC-cceeeeeccCcccccCCCCcEEEEecCc----cccCCCceEEEeCCccccHHHhhcceeeeecCccCCCeEEE
Confidence            788854 9999999999999999999999999962    23456789999999999999999999999999999999999


Q ss_pred             HHHHh-cCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHHHHHHHHHHhCC----CCCCCCccccccHHHHHHHhcc
Q 001410          566 YITCS-NRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRS----SPQNHLSEGLCEKQKLISKIIQ  640 (1082)
Q Consensus       566 hvA~~-~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~~rlvkLLl~~g----a~~~~~~~~g~t~lh~A~~~~~  640 (1082)
                      ++||. ++..|+++++|.|+......+|..+.+. ....+-+..++.+|+....    ......+........++.++..
T Consensus       471 ~V~c~~~~~~~se~ref~~~~~~~~~~d~~s~~d-~~~~~sl~~rl~~~~~r~~~~~~s~~~~~n~~~~~~~~l~skv~~  549 (975)
T KOG0520|consen  471 QVTCRISGLACSEVREFAYLVQPSQQIDKLSWED-FLFQMSLLHRLETMLNRKQSILSSKPSTENTSDAESGNLASKVVH  549 (975)
T ss_pred             EEEecccceeeeeehheeecccCccccccccccc-chhhhHHHHHHHHHHHHhHhHhhccCCccccccccchhHHHHHHH
Confidence            99999 8999999999999999999999888444 5777777888888877332    2223333333333338888888


Q ss_pred             cchHHHHH-HHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHC-CCCCCccCCCCCcHHHHHHHcCCHHHHHHH
Q 001410          641 LKEEEESY-QMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED-GKGPCILDDEGQGVLHLAASLGYDWAIKPT  718 (1082)
Q Consensus       641 l~~e~~~~-Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~-Gad~n~~d~~G~TpLHlAa~~G~~~iv~~L  718 (1082)
                      + .+.|.+ ++ .....+........+.++++++++.++.|+++.+++- |...+..|.+|+..+|+||..|+.|++.+.
T Consensus       550 l-~~~~~~r~~-~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~lg~ewA~ll~  627 (975)
T KOG0520|consen  550 L-LNEWAYRLL-KSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAALGYEWAFLPI  627 (975)
T ss_pred             H-HHHHHHHHH-hhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhhcCCceeEEEE
Confidence            7 788888 66 5555566666777889999999999999999999996 888889999999999999999999999988


Q ss_pred             HhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q 001410          719 VTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL  798 (1082)
Q Consensus       719 L~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~  798 (1082)
                      +..|..++++|..||||||||+.+|++.++..|+..|++.+++++|++.++.|.|+..+|..+|+.++..+|.+..+..+
T Consensus       628 ~~~~~ai~i~D~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~~~  707 (975)
T KOG0520|consen  628 SADGVAIDIRDRNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALSAH  707 (975)
T ss_pred             eecccccccccCCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHHHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999988888


Q ss_pred             cccCccCCCC--CCcHHHHHHHHHHHHHHHhcCCCCCCCCcccccccccchhhhhhhhhhhHHHHHHHhhhhHHHHHHHH
Q 001410          799 LLSLKMNDSA--DDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQRKQLTE  876 (1082)
Q Consensus       799 ~adln~~d~~--g~tal~~a~~~~v~~Lle~~a~~~a~~~~e~~~~lkdsltav~~AaqaaarIq~afR~~s~~rk~~~~  876 (1082)
                      ..++...+.+  ..++..-+    .+...     ....+..+...+++|.++++++|+++|++||++||+++|+++++.+
T Consensus       708 ~~~~~~~~~~~s~~~~~~~~----~~t~~-----e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~~a~~  778 (975)
T KOG0520|consen  708 LSNLELADPNLSADSEEDKA----EKTSS-----EGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKKQARE  778 (975)
T ss_pred             HhhccccccccCCCchhhhh----hhccC-----CCCCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhhhHHH
Confidence            7777766632  23332221    11111     2222222344459999999999999999999999999999999988


Q ss_pred             hhh--hhccchhhHHHHHHhhhcCCCcchHHHHHHHHHHHHHhhhHHHHHHHHhhcCeEeeehhhhhhHHHHHHHHHHHH
Q 001410          877 FNN--ELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIW  954 (1082)
Q Consensus       877 ~~d--e~~~~de~a~sl~A~k~~k~~~r~~~l~~Aa~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~aRk~y~~~r~  954 (1082)
                      .++  ...+.++-+.+|.+.+..+ ....+....++..||++||||+.|+.|+..|+.+|+||+++||++.|+.|+++.|
T Consensus       779 i~~~~~~~i~~~~~~~m~~~~a~~-~~~~r~~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~w  857 (975)
T KOG0520|consen  779 IMDATKEQISEELAVSMKASSAFS-MCDDRSDPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITW  857 (975)
T ss_pred             HHhhcchhhhhhhhhhhhcccchh-cCccccchhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheech
Confidence            886  4556666666666444332 3445567789999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHhhcccchhhhccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 001410          955 SVGILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRL 1034 (1082)
Q Consensus       955 aa~~IQ~~~R~~~~rr~~lRg~~~~~~~~~~~~~~~~~~~~e~~~lk~~rkq~e~r~~~a~~riqs~~R~~~AR~~y~rl 1034 (1082)
                      ++.++.+.+.+|+++++++|+|+.++..+.... .....++.|+|+|+.+++.++|+.+|+++||+|+|+++||+|||||
T Consensus       858 Sv~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~-a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~rs~~a~qqyrR~  936 (975)
T KOG0520|consen  858 SVGVLEKLILRWRRKGKGFRGFKGRALFEEQET-AATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMFRSPKAQQQYRRL  936 (975)
T ss_pred             hhhHHHHHHHHHHHhhhhhcccccccchhcccc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHH
Confidence            999999999999999999999998877652221 1234588999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcccCCCCccccccCCccccccccccCCCCCcc
Q 001410         1035 LTVVEGSRETKESNMVPNGLEDIADGDLDLIDIDSLLDDDTFMS 1078 (1082)
Q Consensus      1035 ~~~~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 1078 (1082)
                      +..++.+|+..-+..+      -..+++..+||+.++.|+++|.
T Consensus       937 ~~~~~~~~~~~~~~~~------~~~~~~~~~~i~~~~~~~~~~~  974 (975)
T KOG0520|consen  937 LLVYEQYQESYKEEAL------VGLLDDSLFDIEQLQADRKIMM  974 (975)
T ss_pred             HHHHHHHHhhhhhhcc------ccccccchhhhHhhhhhhhhhc
Confidence            9999999988721111      1134678899999998888763

>PF03859 CG-1: CG-1 domain; InterPro: IPR005559 CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein []

Probab=100.00  E-value=3.7e-60  Score=444.07  Aligned_cols=117  Identities=71%  Similarity=1.292  Sum_probs=114.5

Q ss_pred             HHHHHHhcCChHHHHHHHhcccceeecccCCCCCCCCcEEeeehhhhhhhhccCccceecCCCcchHhhhhhcccCCEee
Q 001410           19 QMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDV   98 (1082)
Q Consensus        19 ~~~~~~rw~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~l~~r~~~~~~r~dg~~w~~~~~~~~~~e~h~~lk~~~~~~   98 (1082)
                      ++| ++|||+|+||++||+||++|+|..+||++|+|||+|||||+++||||||||+|||||||||||||||||||||+|+
T Consensus         2 ~~~-~~rWl~~~Ei~~IL~n~~~~~~~~~~~~rP~sGslfLf~Rk~~r~fRkDG~~WrKkkdgktvRE~HekLKv~~~e~   80 (118)
T PF03859_consen    2 LKE-KTRWLKPEEIAFILLNYEKFQIWLEPPNRPPSGSLFLFNRKVVRFFRKDGHNWRKKKDGKTVREDHEKLKVGGVEV   80 (118)
T ss_pred             chH-hcccCCHHHHHHHHHhHHhCCcccCCCCCCCCceEEEEEchHhhhhhcccceeEEcCCCCchhhhhhhhccCceee
Confidence            445 9999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEEeecccCCcccceeeeecccCCCCceEEEEeeecC
Q 001410           99 LHCYYAHGEDNENFQRRCYWMLEQDLMHIVFVHYLEVQ  136 (1082)
Q Consensus        99 ~~~~y~~~~~~~~f~rr~y~~~~~~~~~ivlvhy~~~~  136 (1082)
                      ||||||||+++||||||||||||++|+||||||||||+
T Consensus        81 l~~~Yah~~~~~~F~RR~Ywll~~~~~~iVLVHY~~v~  118 (118)
T PF03859_consen   81 LNCYYAHSEDNPTFHRRCYWLLDPPYEHIVLVHYLDVK  118 (118)
T ss_pred             eEEEEEeeccCCCeeeEEEEccCCCCceEEEEEeeecC
Confidence            99999999999999999999999999999999999985

CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin-binding domain and ankyrins [].; GO: 0005516 calmodulin binding, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus

>PHA02946 ankyin-like protein; Provisional

Probab=99.97  E-value=4.3e-29  Score=295.67  Aligned_cols=286  Identities=13%  Similarity=0.071  Sum_probs=228.4

Q ss_pred             ccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH-------H
Q 001410          535 MFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-------H  607 (1082)
Q Consensus       535 ~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl-------~  607 (1082)
                      ..++.++++.|++.|++  .+..+..|.||||+||..++  .++++  +++.+|++++..|..|  .||||+       .
T Consensus        48 ~~~~~~iv~~Ll~~Gad--vn~~d~~G~TpLh~Aa~~g~--~eiv~--lLL~~GAdin~~d~~g--~TpLh~A~~~~~~~  119 (446)
T PHA02946         48 KGLDERFVEELLHRGYS--PNETDDDGNYPLHIASKINN--NRIVA--MLLTHGADPNACDKQH--KTPLYYLSGTDDEV  119 (446)
T ss_pred             cCCCHHHHHHHHHCcCC--CCccCCCCCCHHHHHHHcCC--HHHHH--HHHHCcCCCCCCCCCC--CCHHHHHHHcCCch
Confidence            34466899999999999  67788999999999999998  78766  6778899999999988  899997       2


Q ss_pred             HHHHHHHHhCCCCCC-CCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHH-HhcHHHHHHHH
Q 001410          608 LRLERILSMRSSPQN-HLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMK-EKLYSWLLRKV  685 (1082)
Q Consensus       608 ~rlvkLLl~~ga~~~-~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~-~~~~~~lv~~L  685 (1082)
                      .+++++|+..|+..+ ..+..|.+|+|. +..++  .++++.|++.|++.+..+..+.  ++++.++. ......++++|
T Consensus       120 ~e~v~lLl~~Gadin~~~d~~g~tpL~a-a~~~~--~~vv~~Ll~~gad~~~~d~~G~--t~Lh~A~~~~~~~~~~v~~L  194 (446)
T PHA02946        120 IERINLLVQYGAKINNSVDEEGCGPLLA-CTDPS--ERVFKKIMSIGFEARIVDKFGK--NHIHRHLMSDNPKASTISWM  194 (446)
T ss_pred             HHHHHHHHHcCCCcccccCCCCCcHHHH-HHCCC--hHHHHHHHhccccccccCCCCC--CHHHHHHHhcCCCHHHHHHH
Confidence            578999999996666 467889999984 44455  5899999999999988775543  34443333 34456788999


Q ss_pred             HHCCCCCCccCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCCCCCC
Q 001410          686 CEDGKGPCILDDEGQGVLHLAASLG--YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR-EKTVAVLLSLGAAPGLLT  762 (1082)
Q Consensus       686 le~Gad~n~~d~~G~TpLHlAa~~G--~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~-~~iV~~LL~~GAd~n~~~  762 (1082)
                      ++.|++++.+|..|.||||+|+..|  +.+++++|+. |+++|.+|..|.||||+|+..++ .+++++|+++|+.++..+
T Consensus       195 l~~Gadin~~d~~G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~  273 (446)
T PHA02946        195 MKLGISPSKPDHDGNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQT  273 (446)
T ss_pred             HHcCCCCcccCCCCCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcH
Confidence            9999999999999999999999986  7889999985 99999999999999999999988 589999999997653211


Q ss_pred             C--------------CCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHH----HHH
Q 001410          763 D--------------PSPE-FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA----VQT  823 (1082)
Q Consensus       763 d--------------~~~~-D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~----v~~  823 (1082)
                      .              .+.+ +..|.||||+|+..|+.+++++|+++|.            .+.||+|+|....    ++.
T Consensus       274 ~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~Aa~~g~~eivk~Ll~~~~------------~~~t~L~~A~~~~~~~~v~~  341 (446)
T PHA02946        274 VNICIFYDRDDVLEIINDKGKQYDSTDFKMAVEVGSIRCVKYLLDNDI------------ICEDAMYYAVLSEYETMVDY  341 (446)
T ss_pred             HHHHHHcCchHHHHHHHHcCcccCCCHHHHHHHcCCHHHHHHHHHCCC------------ccccHHHHHHHhCHHHHHHH
Confidence            0              0011 2357899999999999999999999873            2679999988544    455


Q ss_pred             HHHhcCCCCCCCCcccccccccchhhhhhhhh
Q 001410          824 VSEKTATPANDNDESDVLSLKDSLTAICNATQ  855 (1082)
Q Consensus       824 Lle~~a~~~a~~~~e~~~~lkdsltav~~Aaq  855 (1082)
                      |+..++..+.         ..++.|+++.|+.
T Consensus       342 Ll~~ga~~n~---------~~~G~t~l~~a~~  364 (446)
T PHA02946        342 LLFNHFSVDS---------VVNGHTCMSECVR  364 (446)
T ss_pred             HHHCCCCCCC---------ccccccHHHHHHH
Confidence            5555555443         1368889988866

>PHA03095 ankyrin-like protein; Provisional

Probab=99.96  E-value=1.1e-28  Score=293.73  Aligned_cols=279  Identities=15%  Similarity=0.097  Sum_probs=234.5

Q ss_pred             chhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcC-CcccceeeeeeccCCCCCCcccCCCCCCcchhHH---
Q 001410          531 KWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNR-LACSEVREFDYIVGSVKDADISDIYGSSTSESFL---  606 (1082)
Q Consensus       531 ~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g-~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl---  606 (1082)
                      .+++..+++++++.|++.|++  .+..+..|.||||+|+..+ ..+.+++.  +++..|+++|..+..|  .||||+   
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~--vn~~~~~g~t~Lh~a~~~~~~~~~~iv~--~Ll~~Gadin~~~~~g--~TpLh~A~~   92 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGAD--VNFRGEYGKTPLHLYLHYSSEKVKDIVR--LLLEAGADVNAPERCG--FTPLHLYLY   92 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCC--cccCCCCCCCHHHHHHHhcCCChHHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHH
Confidence            357888999999999999999  6677888999999999987 22256654  7788899999998877  999998   


Q ss_pred             ---HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHh-cHHHHH
Q 001410          607 ---HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEK-LYSWLL  682 (1082)
Q Consensus       607 ---~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~-~~~~lv  682 (1082)
                         ...++++|+..|++.+..+..|.||+|+|+.....-.+.++.|++.|++++..+..+.  ++++.++... ....++
T Consensus        93 ~~~~~~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~--tpL~~a~~~~~~~~~iv  170 (471)
T PHA03095         93 NATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGM--TPLAVLLKSRNANVELL  170 (471)
T ss_pred             cCCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCC--CHHHHHHHcCCCCHHHH
Confidence               3689999999998899999999999999994332114789999999999988775543  4444444333 356789


Q ss_pred             HHHHHCCCCCCccCCCCCcHHHHHHHc--CCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCH--HHHHHHHHcCCCC
Q 001410          683 RKVCEDGKGPCILDDEGQGVLHLAASL--GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE--KTVAVLLSLGAAP  758 (1082)
Q Consensus       683 ~~Lle~Gad~n~~d~~G~TpLHlAa~~--G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~--~iV~~LL~~GAd~  758 (1082)
                      ++|++.|++++..|..|.||||+|+..  ++..+++.|+.+|++++.+|..|+||||+||..|+.  .++..|+..|+++
T Consensus       171 ~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~di  250 (471)
T PHA03095        171 RLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISI  250 (471)
T ss_pred             HHHHHcCCCCcccCCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCC
Confidence            999999999999999999999999875  778999999999999999999999999999999975  6888999999999


Q ss_pred             CCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHHhc
Q 001410          759 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKT  828 (1082)
Q Consensus       759 n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle~~  828 (1082)
                      |.      +|..|.||||+|+..|+.+++++|++.|+     +++.++..|.||++.|...+...+++.+
T Consensus       251 n~------~d~~g~TpLh~A~~~~~~~~v~~LL~~ga-----d~n~~~~~g~tpl~~A~~~~~~~~v~~L  309 (471)
T PHA03095        251 NA------RNRYGQTPLHYAAVFNNPRACRRLIALGA-----DINAVSSDGNTPLSLMVRNNNGRAVRAA  309 (471)
T ss_pred             CC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCcccCCCCCCHHHHHHHhCCHHHHHHH
Confidence            88      55799999999999999999999999995     4888999999999999865444444433

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.5e-28  Score=306.22  Aligned_cols=296  Identities=14%  Similarity=0.039  Sum_probs=232.6

Q ss_pred             cchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH---
Q 001410          530 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL---  606 (1082)
Q Consensus       530 ~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl---  606 (1082)
                      ...++..|+.++++.|++.|++  .+..+..|.||||+|+..|+  .+++.  +++..|++++..+.+|  .+++|+   
T Consensus       149 l~~~i~~~~~~i~k~Ll~~Gad--vn~~d~~G~TpLh~Aa~~G~--~~iv~--~LL~~Gad~n~~~~~g--~t~L~~A~~  220 (682)
T PHA02876        149 IKERIQQDELLIAEMLLEGGAD--VNAKDIYCITPIHYAAERGN--AKMVN--LLLSYGADVNIIALDD--LSVLECAVD  220 (682)
T ss_pred             HHHHHHCCcHHHHHHHHhCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCcCccCCCC--CCHHHHHHH
Confidence            4567788888888888888888  66677788899999998888  67765  6777788888877777  677776   


Q ss_pred             --HHHHH-----------------------------HHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCC
Q 001410          607 --HLRLE-----------------------------RILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANP  655 (1082)
Q Consensus       607 --~~rlv-----------------------------kLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~  655 (1082)
                        +..++                             ++|+..|...+..+..|.||||+|+..+.+ ...+..|++.|++
T Consensus       221 ~~~~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~-~~iv~lLl~~gad  299 (682)
T PHA02876        221 SKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSL-SRLVPKLLERGAD  299 (682)
T ss_pred             cCCHHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCH-HHHHHHHHHCCCC
Confidence              23344                             445555555666677889999999998876 5688888888888


Q ss_pred             CCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC-CHHHHHHHHhCCCCccccCCCCCC
Q 001410          656 EKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG-YDWAIKPTVTAGVSINFRDLSGWT  734 (1082)
Q Consensus       656 ~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G-~~~iv~~LL~~Gadvn~~D~~G~T  734 (1082)
                      ++..+..+.  ++++.++..+....+++.|+..|++++..|..|+||||+|+..+ +.+++.+|++.|+++|.+|..|.|
T Consensus       300 in~~d~~g~--TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~T  377 (682)
T PHA02876        300 VNAKNIKGE--TPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKT  377 (682)
T ss_pred             CCCcCCCCC--CHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCC
Confidence            887764433  44444444443567889999999999999999999999998864 678889999999999999999999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCCCcccccCccCCCCCCcHH
Q 001410          735 ALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH-KGISGFLAESSLTSLLLSLKMNDSADDGAL  813 (1082)
Q Consensus       735 pLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~-~~iv~~LLe~Ga~~~~adln~~d~~g~tal  813 (1082)
                      |||+|+..|+.+++++|+++|++++..      +..|.||||+|+..++ ..++++|++.|+     ++|.+|..|.||+
T Consensus       378 pLh~Aa~~~~~~iv~~Ll~~gad~~~~------~~~g~T~Lh~A~~~~~~~~~vk~Ll~~ga-----din~~d~~G~TpL  446 (682)
T PHA02876        378 PIHYAAVRNNVVIINTLLDYGADIEAL------SQKIGTALHFALCGTNPYMSVKTLIDRGA-----NVNSKNKDLSTPL  446 (682)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCcccc------CCCCCchHHHHHHcCCHHHHHHHHHhCCC-----CCCcCCCCCChHH
Confidence            999999999999999999999998874      4688999999987666 567899998885     4888999999999


Q ss_pred             HHHHH-----HHHHHHHHhcCCCCCCCCcccccccccchhhhhhhhh
Q 001410          814 EDSIA-----KAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ  855 (1082)
Q Consensus       814 ~~a~~-----~~v~~Lle~~a~~~a~~~~e~~~~lkdsltav~~Aaq  855 (1082)
                      |+|+.     ..++.|++.|++++.        ....+.|++..|+.
T Consensus       447 h~Aa~~~~~~~iv~lLl~~Gad~n~--------~d~~g~tpl~~a~~  485 (682)
T PHA02876        447 HYACKKNCKLDVIEMLLDNGADVNA--------INIQNQYPLLIALE  485 (682)
T ss_pred             HHHHHhCCcHHHHHHHHHCCCCCCC--------CCCCCCCHHHHHHH
Confidence            99864     566777787776655        34567788877654

>PHA02876 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.7e-28  Score=305.73  Aligned_cols=284  Identities=13%  Similarity=-0.018  Sum_probs=241.5

Q ss_pred             ccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeee---------------------------
Q 001410          529 KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREF---------------------------  581 (1082)
Q Consensus       529 ~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~f---------------------------  581 (1082)
                      ++++||..|+.++++.|++.|++  ....+..|.||||+|+..++  .+++.+                           
T Consensus       181 pLh~Aa~~G~~~iv~~LL~~Gad--~n~~~~~g~t~L~~A~~~~~--~~ivk~Ll~~~~~~~~~~~~L~~ai~~~~~~~~  256 (682)
T PHA02876        181 PIHYAAERGNAKMVNLLLSYGAD--VNIIALDDLSVLECAVDSKN--IDTIKAIIDNRSNINKNDLSLLKAIRNEDLETS  256 (682)
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCC--cCccCCCCCCHHHHHHHcCC--HHHHHHHHhcCCCCCCCcHHHHHHHHcCCHHHH
Confidence            46799999999999999999998  66678889999999999877  444332                           


Q ss_pred             eeccCCCCCCcccCCCCCCcchhHHHH------HHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCC
Q 001410          582 DYIVGSVKDADISDIYGSSTSESFLHL------RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANP  655 (1082)
Q Consensus       582 eyl~~~~a~vn~~d~~g~~~t~Lhl~~------rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~  655 (1082)
                      .++...|++++..+..|  .|+||+..      .++++|+..|++.+..+..|.||+|+|+..+.. .+.++.|+..|++
T Consensus       257 ~~Ll~~g~~vn~~d~~g--~TpLh~Aa~~~~~~~iv~lLl~~gadin~~d~~g~TpLh~Aa~~g~~-~~~v~~Ll~~gad  333 (682)
T PHA02876        257 LLLYDAGFSVNSIDDCK--NTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGYD-TENIRTLIMLGAD  333 (682)
T ss_pred             HHHHHCCCCCCCCCCCC--CCHHHHHHhCCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCC-HHHHHHHHHcCCC
Confidence            24455566777777766  89999933      588999999988888899999999999998854 5889999999999


Q ss_pred             CCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCH
Q 001410          656 EKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTA  735 (1082)
Q Consensus       656 ~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~Tp  735 (1082)
                      .+..+..+.  ++++.++.......++.+|++.|+++|.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus       334 in~~d~~g~--TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~~~~~~~g~T~  411 (682)
T PHA02876        334 VNAADRLYI--TPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTA  411 (682)
T ss_pred             CCCcccCCC--cHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCccccCCCCCch
Confidence            888764443  556666666677888999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCC-HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCcccccCccCCCCCCcHH
Q 001410          736 LHWAAYCGR-EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG-HKGISGFLAESSLTSLLLSLKMNDSADDGAL  813 (1082)
Q Consensus       736 LH~Aa~~G~-~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G-~~~iv~~LLe~Ga~~~~adln~~d~~g~tal  813 (1082)
                      ||+|+..++ ..++++|++.|+++|.      +|..|+||||+|+..| +.+++++|++.|++     ++.+|..|.||+
T Consensus       412 Lh~A~~~~~~~~~vk~Ll~~gadin~------~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad-----~n~~d~~g~tpl  480 (682)
T PHA02876        412 LHFALCGTNPYMSVKTLIDRGANVNS------KNKDLSTPLHYACKKNCKLDVIEMLLDNGAD-----VNAINIQNQYPL  480 (682)
T ss_pred             HHHHHHcCCHHHHHHHHHhCCCCCCc------CCCCCChHHHHHHHhCCcHHHHHHHHHCCCC-----CCCCCCCCCCHH
Confidence            999998766 5679999999999988      5679999999999977 68999999999954     888999999999


Q ss_pred             HHHHH--HHHHHHHHhcCCCC
Q 001410          814 EDSIA--KAVQTVSEKTATPA  832 (1082)
Q Consensus       814 ~~a~~--~~v~~Lle~~a~~~  832 (1082)
                      +.+..  ..+..|+..++...
T Consensus       481 ~~a~~~~~~v~~Ll~~~a~~~  501 (682)
T PHA02876        481 LIALEYHGIVNILLHYGAELR  501 (682)
T ss_pred             HHHHHhCCHHHHHHHCCCCCC
Confidence            98763  45667777776544

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.96  E-value=2.5e-28  Score=299.16  Aligned_cols=288  Identities=13%  Similarity=0.037  Sum_probs=194.5

Q ss_pred             ccchhh--ccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH
Q 001410          529 KCKWSC--MFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL  606 (1082)
Q Consensus       529 ~~~~ac--~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl  606 (1082)
                      .+++|+  .+|+.++++.|++.|++  .+..+..|.||||+|+..++.+.++++  +++..|+++|..+..|  .||||.
T Consensus       180 pLH~A~~n~~~~~eIVklLLe~GAD--VN~kD~~G~TPLH~Aa~~g~~~~eIVk--lLLe~GADVN~kD~~G--~TPLh~  253 (764)
T PHA02716        180 ILHAYLGNMYVDIDILEWLCNNGVN--VNLQNNHLITPLHTYLITGNVCASVIK--KIIELGGDMDMKCVNG--MSPIMT  253 (764)
T ss_pred             HHHHHHHhccCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHcCCCCHHHHH--HHHHcCCCCCCCCCCC--CCHHHH
Confidence            344543  34555666666666666  555556666666666665542234433  4555566666665555  666654


Q ss_pred             --------HHHHHHHHHhCCCCCCCCccccccHHH---HHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHH-
Q 001410          607 --------HLRLERILSMRSSPQNHLSEGLCEKQK---LISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMK-  674 (1082)
Q Consensus       607 --------~~rlvkLLl~~ga~~~~~~~~g~t~lh---~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~-  674 (1082)
                              +.+++++|+..++.....  .....++   .|+..+.  .+.++.|++.|++++..+..+.  ++++.++. 
T Consensus       254 Ai~~a~n~~~EIvkiLie~~d~n~~~--~~~~~L~~~i~AA~~g~--leiVklLLe~GAdIN~kD~~G~--TPLH~Aaa~  327 (764)
T PHA02716        254 YIINIDNINPEITNIYIESLDGNKVK--NIPMILHSYITLARNID--ISVVYSFLQPGVKLHYKDSAGR--TCLHQYILR  327 (764)
T ss_pred             HHHhhhccCHHHHHHHHHhccccccc--cchhhhHHHHHHHHcCC--HHHHHHHHhCCCceeccCCCCC--CHHHHHHHH
Confidence                    234555555443211111  1111222   2444555  4788999999998887764433  44444433 


Q ss_pred             HhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHH--------------cCCHHHHHHHHhCCCCccccCCCCCCHHHHH-
Q 001410          675 EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS--------------LGYDWAIKPTVTAGVSINFRDLSGWTALHWA-  739 (1082)
Q Consensus       675 ~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~--------------~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~A-  739 (1082)
                      ..+...++++|++.|+++|.+|..|+||||+|+.              .|+.+++++|+++|++++.+|..|+||||.| 
T Consensus       328 ~~~~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~  407 (764)
T PHA02716        328 HNISTDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYI  407 (764)
T ss_pred             hCCCchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHH
Confidence            3456788999999999999999999999999875              3688999999999999999999999999942 


Q ss_pred             ---HHcCCHHHHHHHHHcCCCCCCC-------------------------------------------------------
Q 001410          740 ---AYCGREKTVAVLLSLGAAPGLL-------------------------------------------------------  761 (1082)
Q Consensus       740 ---a~~G~~~iV~~LL~~GAd~n~~-------------------------------------------------------  761 (1082)
                         ...++.+++++|++.|+.....                                                       
T Consensus       408 ~~a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~  487 (764)
T PHA02716        408 CTAQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIER  487 (764)
T ss_pred             HHHHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhh
Confidence               2357889999999876532100                                                       


Q ss_pred             CCCCCCCCCCCCHHHHHHHcCCHH-----HHHHHHHcCCCcccccCccCCCCCCcHHHHHHH---------HHHHHHHHh
Q 001410          762 TDPSPEFPLSRTPSDLASSNGHKG-----ISGFLAESSLTSLLLSLKMNDSADDGALEDSIA---------KAVQTVSEK  827 (1082)
Q Consensus       762 ~d~~~~D~~G~TPLhlAa~~G~~~-----iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~---------~~v~~Lle~  827 (1082)
                      .+.+..|..|+||||+|+..|+.+     ++++|++.|+     ++|.+|..|.||+|+|..         ++++.|++.
T Consensus       488 ~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GA-----DIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~  562 (764)
T PHA02716        488 YNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQY-----NINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDK  562 (764)
T ss_pred             ccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCC-----CCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhc
Confidence            012345778999999999998874     4599999885     488899999999999886         677888888


Q ss_pred             cCCCCC
Q 001410          828 TATPAN  833 (1082)
Q Consensus       828 ~a~~~a  833 (1082)
                      ++..+.
T Consensus       563 ga~~~~  568 (764)
T PHA02716        563 RPNVDI  568 (764)
T ss_pred             CCCcch
Confidence            776654

>PHA02946 ankyin-like protein; Provisional

Probab=99.96  E-value=2.6e-28  Score=289.02  Aligned_cols=274  Identities=11%  Similarity=0.002  Sum_probs=225.2

Q ss_pred             cccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcc-cCCCCCCcchhHH
Q 001410          528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADI-SDIYGSSTSESFL  606 (1082)
Q Consensus       528 ~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~-~d~~g~~~t~Lhl  606 (1082)
                      +++++||..|+.++++.|++.|++  .+..+..|+||||+|+.++....++  +++++..|++++. .|.+|  .|+++.
T Consensus        74 TpLh~Aa~~g~~eiv~lLL~~GAd--in~~d~~g~TpLh~A~~~~~~~~e~--v~lLl~~Gadin~~~d~~g--~tpL~a  147 (446)
T PHA02946         74 YPLHIASKINNNRIVAMLLTHGAD--PNACDKQHKTPLYYLSGTDDEVIER--INLLVQYGAKINNSVDEEG--CGPLLA  147 (446)
T ss_pred             CHHHHHHHcCCHHHHHHHHHCcCC--CCCCCCCCCCHHHHHHHcCCchHHH--HHHHHHcCCCcccccCCCC--CcHHHH
Confidence            457799999999999999999999  6778999999999999876532344  4478888999986 46666  888876


Q ss_pred             ----HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhc--HHH
Q 001410          607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKL--YSW  680 (1082)
Q Consensus       607 ----~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~--~~~  680 (1082)
                          +.+++++|+..|+..+..+..|.+++|+|......-.+.++.|++.|++++..+..+.   ++++.+...+  ...
T Consensus       148 a~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~d~~G~---TpLH~Aa~~~~~~~~  224 (446)
T PHA02946        148 CTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGN---TPLHIVCSKTVKNVD  224 (446)
T ss_pred             HHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCcccCCCCC---CHHHHHHHcCCCcHH
Confidence                5689999999998889999999999999887665313788999999999998875443   5555555543  667


Q ss_pred             HHHHHHHCCCCCCccCCCCCcHHHHHHHcCC-HHHHHHHHhCCCCcc--------------------ccC-CCCCCHHHH
Q 001410          681 LLRKVCEDGKGPCILDDEGQGVLHLAASLGY-DWAIKPTVTAGVSIN--------------------FRD-LSGWTALHW  738 (1082)
Q Consensus       681 lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~-~~iv~~LL~~Gadvn--------------------~~D-~~G~TpLH~  738 (1082)
                      ++++|+. |+++|.+|..|.||||+|+..++ .+++++|+.+|++++                    ..+ ..|.||||+
T Consensus       225 iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~~~~a~~~~~~~~~e~l~~~g~~~~~TpLh~  303 (446)
T PHA02946        225 IINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQTVNICIFYDRDDVLEIINDKGKQYDSTDFKM  303 (446)
T ss_pred             HHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcHHHHHHHcCchHHHHHHHHcCcccCCCHHHH
Confidence            7888885 89999999999999999999988 589999999987542                    222 357899999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHH
Q 001410          739 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA  818 (1082)
Q Consensus       739 Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~  818 (1082)
                      |+..|+.++|++||++|+             .|.||||+|+..|+.+++++|+.+|++     +|.++ .|.||+|+|..
T Consensus       304 Aa~~g~~eivk~Ll~~~~-------------~~~t~L~~A~~~~~~~~v~~Ll~~ga~-----~n~~~-~G~t~l~~a~~  364 (446)
T PHA02946        304 AVEVGSIRCVKYLLDNDI-------------ICEDAMYYAVLSEYETMVDYLLFNHFS-----VDSVV-NGHTCMSECVR  364 (446)
T ss_pred             HHHcCCHHHHHHHHHCCC-------------ccccHHHHHHHhCHHHHHHHHHHCCCC-----CCCcc-ccccHHHHHHH
Confidence            999999999999999864             578999999999999999999999955     77654 59999999997


Q ss_pred             HHHHHHHHhcCC
Q 001410          819 KAVQTVSEKTAT  830 (1082)
Q Consensus       819 ~~v~~Lle~~a~  830 (1082)
                      .....+++.+..
T Consensus       365 ~~~~~~~~~ll~  376 (446)
T PHA02946        365 LNNPVILSKLML  376 (446)
T ss_pred             cCCHHHHHHHHh
Confidence            776666666654

>PHA03095 ankyrin-like protein; Provisional

Probab=99.96  E-value=3e-28  Score=289.91  Aligned_cols=266  Identities=19%  Similarity=0.193  Sum_probs=224.4

Q ss_pred             CeEEEEEcccccccccccccchhhccC---CcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCC
Q 001410          511 EIEVVVTGMFLKSHQEVAKCKWSCMFA---EVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGS  587 (1082)
Q Consensus       511 gtkVlI~G~~~~~~~~~~~~~~ac~fG---~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~  587 (1082)
                      |..|-..+.+..++     +++|+.+|   +.+++..|++.|++  .+..+..|.||||+|+..++. .+++.  ++...
T Consensus        37 ga~vn~~~~~g~t~-----Lh~a~~~~~~~~~~iv~~Ll~~Gad--in~~~~~g~TpLh~A~~~~~~-~~iv~--lLl~~  106 (471)
T PHA03095         37 GADVNFRGEYGKTP-----LHLYLHYSSEKVKDIVRLLLEAGAD--VNAPERCGFTPLHLYLYNATT-LDVIK--LLIKA  106 (471)
T ss_pred             CCCcccCCCCCCCH-----HHHHHHhcCCChHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCCc-HHHHH--HHHHc
Confidence            33344444444444     66999999   99999999999999  777788999999999998841 55554  77888


Q ss_pred             CCCCcccCCCCCCcchhHHHH-------HHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccC
Q 001410          588 VKDADISDIYGSSTSESFLHL-------RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLS  660 (1082)
Q Consensus       588 ~a~vn~~d~~g~~~t~Lhl~~-------rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~  660 (1082)
                      |++++..+..|  .||||+..       .++++|+..|++.+..+..|.+|+|++........+.++.|++.|++.+..+
T Consensus       107 ga~in~~~~~g--~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d  184 (471)
T PHA03095        107 GADVNAKDKVG--RTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVD  184 (471)
T ss_pred             CCCCCCCCCCC--CCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcCCCCcccC
Confidence            99999998888  89999844       7899999999888888999999999988876421478999999999988774


Q ss_pred             cCcchhHHHHHHHHH-hcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCH--HHHHHHHhCCCCccccCCCCCCHHH
Q 001410          661 QHVEKYQILQKIMKE-KLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYD--WAIKPTVTAGVSINFRDLSGWTALH  737 (1082)
Q Consensus       661 ~~~~~~~~l~~~a~~-~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~--~iv~~LL~~Gadvn~~D~~G~TpLH  737 (1082)
                      ..+  .++++.++.. .....+++.|++.|++++.+|..|.||||+||..|+.  .++..|+..|+++|.+|..|+||||
T Consensus       185 ~~g--~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d~~g~TpLh  262 (471)
T PHA03095        185 DRF--RSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLH  262 (471)
T ss_pred             CCC--CCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence            332  2444444443 4567789999999999999999999999999999975  5788999999999999999999999


Q ss_pred             HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 001410          738 WAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  796 (1082)
Q Consensus       738 ~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~  796 (1082)
                      +|+..|+.++|++||++||+++.      +|..|.||||+|+..|+.+++++|++.+++
T Consensus       263 ~A~~~~~~~~v~~LL~~gad~n~------~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~  315 (471)
T PHA03095        263 YAAVFNNPRACRRLIALGADINA------VSSDGNTPLSLMVRNNNGRAVRAALAKNPS  315 (471)
T ss_pred             HHHHcCCHHHHHHHHHcCCCCcc------cCCCCCCHHHHHHHhCCHHHHHHHHHhCCC
Confidence            99999999999999999999998      457999999999999999999999998855

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.96  E-value=1.3e-27  Score=282.48  Aligned_cols=263  Identities=15%  Similarity=0.095  Sum_probs=168.3

Q ss_pred             chhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH----
Q 001410          531 KWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL----  606 (1082)
Q Consensus       531 ~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl----  606 (1082)
                      ..||..|++++++.|+..+.. .....+..|.||||+|+..|+  .++++  +++..|++++..+..|  .++++.    
T Consensus         6 ~~ai~~gd~~~v~~ll~~~~~-~~n~~~~~~~tpL~~A~~~g~--~~iv~--~Ll~~Ga~~n~~~~~~--~t~L~~A~~~   78 (434)
T PHA02874          6 RMCIYSGDIEAIEKIIKNKGN-CINISVDETTTPLIDAIRSGD--AKIVE--LFIKHGADINHINTKI--PHPLLTAIKI   78 (434)
T ss_pred             HHHHhcCCHHHHHHHHHcCCC-CCCCcCCCCCCHHHHHHHcCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHHHHc
Confidence            356666666666666654322 133344556666666666666  55544  4555566666555544  555555    


Q ss_pred             -HHHHHHHHHhC-----------------------CCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcC
Q 001410          607 -HLRLERILSMR-----------------------SSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQH  662 (1082)
Q Consensus       607 -~~rlvkLLl~~-----------------------ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~  662 (1082)
                       +..++++|+..                       |++.+..+..|.||+|+|+..+..  +.+++|++.|++++..+..
T Consensus        79 ~~~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~--~~v~~Ll~~gad~n~~d~~  156 (434)
T PHA02874         79 GAHDIIKLLIDNGVDTSILPIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDL--ESIKMLFEYGADVNIEDDN  156 (434)
T ss_pred             CCHHHHHHHHHCCCCCCcchhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCH--HHHHHHHhCCCCCCCcCCC
Confidence             34555555544                       444455566677777777777763  6777777777776665533


Q ss_pred             cchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHc
Q 001410          663 VEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC  742 (1082)
Q Consensus       663 ~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~  742 (1082)
                      +   .++++.+...+...++++|++.|++++..|..|.||||+|+..|+.+++++|++.|++++.++..|+||||+|+..
T Consensus       157 g---~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~  233 (434)
T PHA02874        157 G---CYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIH  233 (434)
T ss_pred             C---CCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHC
Confidence            2   3455555556666677777777777777777777777777777777777777777777777777777777777776


Q ss_pred             CCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHH
Q 001410          743 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG-HKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA  818 (1082)
Q Consensus       743 G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G-~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~  818 (1082)
                      ++ .++.+|+ .|++++.      +|..|.||||+|+..+ +.+++++|++.|++     ++.+|..|.||++.|..
T Consensus       234 ~~-~~i~~Ll-~~~~in~------~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad-----~n~~d~~g~TpL~~A~~  297 (434)
T PHA02874        234 NR-SAIELLI-NNASIND------QDIDGSTPLHHAINPPCDIDIIDILLYHKAD-----ISIKDNKGENPIDTAFK  297 (434)
T ss_pred             Ch-HHHHHHH-cCCCCCC------cCCCCCCHHHHHHhcCCcHHHHHHHHHCcCC-----CCCCCCCCCCHHHHHHH
Confidence            55 3444444 4666665      4467777777777654 66777777777643     66677777777777653

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.96  E-value=8.5e-28  Score=286.95  Aligned_cols=272  Identities=17%  Similarity=0.111  Sum_probs=223.5

Q ss_pred             cCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH---------
Q 001410          536 FAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL---------  606 (1082)
Q Consensus       536 fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl---------  606 (1082)
                      .....++..++..+-+  ..+....|.||||+|+..++  .++++  +++..|++++..+..+  .+++|+         
T Consensus        12 ~~~~~~~~~~~~~~~~--~~~~~~~~~t~L~~A~~~~~--~~ivk--~Ll~~g~~~~~~~~~~--~t~L~~~~~~~a~~~   83 (480)
T PHA03100         12 IIKVKNIKYIIMEDDL--NDYSYKKPVLPLYLAKEARN--IDVVK--ILLDNGADINSSTKNN--STPLHYLSNIKYNLT   83 (480)
T ss_pred             HHHHHHHHHHHhcCcc--chhhhcccchhhhhhhccCC--HHHHH--HHHHcCCCCCCccccC--cCHHHHHHHHHHHhh
Confidence            3444667777777655  44557778888888888877  66655  6677778887776666  677776         


Q ss_pred             -HHHHHHHHHhCCCCCCCCccccccHHHHHH--HhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhc--HHHH
Q 001410          607 -HLRLERILSMRSSPQNHLSEGLCEKQKLIS--KIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKL--YSWL  681 (1082)
Q Consensus       607 -~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~--~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~--~~~l  681 (1082)
                       +.+++++|+..|+..+..+..|.+|+|+|+  ..++  .+.+++|++.|++.+..+..+   .++++.+...+  ...+
T Consensus        84 ~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~--~~iv~~Ll~~g~~~~~~~~~g---~t~L~~A~~~~~~~~~i  158 (480)
T PHA03100         84 DVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNS--YSIVEYLLDNGANVNIKNSDG---ENLLHLYLESNKIDLKI  158 (480)
T ss_pred             chHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcccCh--HHHHHHHHHcCCCCCccCCCC---CcHHHHHHHcCCChHHH
Confidence             457888999988777888888999999999  7777  489999999998887766443   46666666666  8889


Q ss_pred             HHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCC------CCHHHHHHHcCC--HHHHHHHHH
Q 001410          682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSG------WTALHWAAYCGR--EKTVAVLLS  753 (1082)
Q Consensus       682 v~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G------~TpLH~Aa~~G~--~~iV~~LL~  753 (1082)
                      +++|++.|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|      .||||+|+..|+  .+++++|++
T Consensus       159 v~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~  238 (480)
T PHA03100        159 LKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLS  238 (480)
T ss_pred             HHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHH
Confidence            999999999999999999999999999999999999999999999999999      899999999999  999999999


Q ss_pred             cCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHH----HHHHHHHHhcC
Q 001410          754 LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA----KAVQTVSEKTA  829 (1082)
Q Consensus       754 ~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~----~~v~~Lle~~a  829 (1082)
                      +|++++.      +|..|.||||+|+..|+.+++++|++.|+     +++.++..|.||++.|..    ..++.|++.++
T Consensus       239 ~g~din~------~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga-----d~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~  307 (480)
T PHA03100        239 YGVPINI------KDVYGFTPLHYAVYNNNPEFVKYLLDLGA-----NPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGP  307 (480)
T ss_pred             cCCCCCC------CCCCCCCHHHHHHHcCCHHHHHHHHHcCC-----CCCccCCCCCcHHHHHHHhCCHHHHHHHHhcCC
Confidence            9999888      55789999999999999999999999985     478889899999999874    55566666665


Q ss_pred             CC
Q 001410          830 TP  831 (1082)
Q Consensus       830 ~~  831 (1082)
                      +.
T Consensus       308 ~i  309 (480)
T PHA03100        308 SI  309 (480)
T ss_pred             CH
Confidence            43

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.96  E-value=3.3e-27  Score=282.43  Aligned_cols=266  Identities=16%  Similarity=0.108  Sum_probs=166.1

Q ss_pred             cccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHH
Q 001410          528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH  607 (1082)
Q Consensus       528 ~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~  607 (1082)
                      +++++||..|+.++++.|++.|++  .+..+..|+||||+||..++  .+++.  +++..+...+.              
T Consensus        39 tPLh~A~~~g~~e~vk~Ll~~gad--vn~~d~~g~TpLh~A~~~g~--~~~v~--~Ll~~~~~~~~--------------   98 (477)
T PHA02878         39 IPLHQAVEARNLDVVKSLLTRGHN--VNQPDHRDLTPLHIICKEPN--KLGMK--EMIRSINKCSV--------------   98 (477)
T ss_pred             chHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCcc--HhHHH--HHHHHHhcccc--------------
Confidence            346799999999999999999988  67788899999999998877  44433  33322221111              


Q ss_pred             HHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHH
Q 001410          608 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE  687 (1082)
Q Consensus       608 ~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle  687 (1082)
                                        ..+.++++.|+..++  .+.++.|+..+.......   .................++++|++
T Consensus        99 ------------------~~~~~~l~~a~~~~~--~ei~~~Ll~~~~~~~~~~---~~~~~~~~~~~~~~~~~iv~~Ll~  155 (477)
T PHA02878         99 ------------------FYTLVAIKDAFNNRN--VEIFKIILTNRYKNIQTI---DLVYIDKKSKDDIIEAEITKLLLS  155 (477)
T ss_pred             ------------------ccchhhHHHHHHcCC--HHHHHHHHhCcccCcccC---cHHHHhhccchhhHHHHHHHHHHH
Confidence                              223455566666665  356666654332221111   000000000111122346677777


Q ss_pred             CCCCCCccCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 001410          688 DGKGPCILDDE-GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSP  766 (1082)
Q Consensus       688 ~Gad~n~~d~~-G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~  766 (1082)
                      .|+++|.+|.. |.||||+||..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|++.|++++.      
T Consensus       156 ~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~------  229 (477)
T PHA02878        156 YGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDA------  229 (477)
T ss_pred             cCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC------
Confidence            77777777766 77777777777777777777777777777777777777777777777777777777777666      


Q ss_pred             CCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCcccccCccCCC-CCCcHHHHHH--HHHHHHHHHhcCCCCCCCCcccccc
Q 001410          767 EFPLSRTPSDLASSN-GHKGISGFLAESSLTSLLLSLKMNDS-ADDGALEDSI--AKAVQTVSEKTATPANDNDESDVLS  842 (1082)
Q Consensus       767 ~D~~G~TPLhlAa~~-G~~~iv~~LLe~Ga~~~~adln~~d~-~g~tal~~a~--~~~v~~Lle~~a~~~a~~~~e~~~~  842 (1082)
                      +|..|.||||+|+.. ++.+++++|+++|++     ++.++. .|.||+|.|.  ...++.|++.|++++.        .
T Consensus       230 ~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gad-----vn~~~~~~g~TpLh~A~~~~~~v~~Ll~~gadin~--------~  296 (477)
T PHA02878        230 RDKCGNTPLHISVGYCKDYDILKLLLEHGVD-----VNAKSYILGLTALHSSIKSERKLKLLLEYGADINS--------L  296 (477)
T ss_pred             CCCCCCCHHHHHHHhcCCHHHHHHHHHcCCC-----CCccCCCCCCCHHHHHccCHHHHHHHHHCCCCCCC--------c
Confidence            445677777777754 567777777776643     555553 4677777664  3455666666665554        2


Q ss_pred             cccchhhhhhhhh
Q 001410          843 LKDSLTAICNATQ  855 (1082)
Q Consensus       843 lkdsltav~~Aaq  855 (1082)
                      ..++.|+++.|+.
T Consensus       297 d~~g~TpL~~A~~  309 (477)
T PHA02878        297 NSYKLTPLSSAVK  309 (477)
T ss_pred             CCCCCCHHHHHHH
Confidence            3456666666654

>PHA03100 ankyrin repeat protein; Provisional

Probab=99.95  E-value=3.8e-27  Score=281.33  Aligned_cols=250  Identities=18%  Similarity=0.145  Sum_probs=225.8

Q ss_pred             cccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHH-----HHhcCCcccceeeeeeccCCCCCCcccCCCCCCcc
Q 001410          528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYI-----TCSNRLACSEVREFDYIVGSVKDADISDIYGSSTS  602 (1082)
Q Consensus       528 ~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhv-----A~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t  602 (1082)
                      +++++||..|+.++++.|++.|+.  ....+..|.||||+     |+..++  .+++.  +++..|++++..+..|  .|
T Consensus        37 t~L~~A~~~~~~~ivk~Ll~~g~~--~~~~~~~~~t~L~~~~~~~a~~~~~--~~iv~--~Ll~~ga~i~~~d~~g--~t  108 (480)
T PHA03100         37 LPLYLAKEARNIDVVKILLDNGAD--INSSTKNNSTPLHYLSNIKYNLTDV--KEIVK--LLLEYGANVNAPDNNG--IT  108 (480)
T ss_pred             hhhhhhhccCCHHHHHHHHHcCCC--CCCccccCcCHHHHHHHHHHHhhch--HHHHH--HHHHCCCCCCCCCCCC--Cc
Confidence            457899999999999999999998  56677889999999     999988  67755  7778889998888877  88


Q ss_pred             hhHHHH-------HHHHHHHhCCCCCCCCccccccHHHHHHHhc--ccchHHHHHHHhhcCCCCccCcCcchhHHHHHHH
Q 001410          603 ESFLHL-------RLERILSMRSSPQNHLSEGLCEKQKLISKII--QLKEEEESYQMVEANPEKNLSQHVEKYQILQKIM  673 (1082)
Q Consensus       603 ~Lhl~~-------rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~--~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a  673 (1082)
                      |||+..       .++++|+..|+..+..+..|.+++|+|+..+  .  .+.++.|++.|++++..+.   .+.++++.+
T Consensus       109 pL~~A~~~~~~~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~--~~iv~~Ll~~g~din~~d~---~g~tpL~~A  183 (480)
T PHA03100        109 PLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLLHLYLESNKID--LKILKLLIDKGVDINAKNR---YGYTPLHIA  183 (480)
T ss_pred             hhhHHHhcccChHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCCh--HHHHHHHHHCCCCcccccC---CCCCHHHHH
Confidence            998744       7899999999888888999999999999999  7  5999999999999888764   334666777


Q ss_pred             HHhcHHHHHHHHHHCCCCCCccCCCC------CcHHHHHHHcCC--HHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCH
Q 001410          674 KEKLYSWLLRKVCEDGKGPCILDDEG------QGVLHLAASLGY--DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  745 (1082)
Q Consensus       674 ~~~~~~~lv~~Lle~Gad~n~~d~~G------~TpLHlAa~~G~--~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~  745 (1082)
                      ...+...++++|++.|++++..+..|      .||||+|+..|+  .+++++|+++|+++|.+|..|.||||+|+..|+.
T Consensus       184 ~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~  263 (480)
T PHA03100        184 VEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNP  263 (480)
T ss_pred             HHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence            77778899999999999999999999      999999999999  9999999999999999999999999999999999


Q ss_pred             HHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 001410          746 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  796 (1082)
Q Consensus       746 ~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~  796 (1082)
                      +++++|+++|++++.      +|..|.||||+|+..|+.+++++|++.|++
T Consensus       264 ~iv~~Ll~~gad~n~------~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~  308 (480)
T PHA03100        264 EFVKYLLDLGANPNL------VNKYGDTPLHIAILNNNKEIFKLLLNNGPS  308 (480)
T ss_pred             HHHHHHHHcCCCCCc------cCCCCCcHHHHHHHhCCHHHHHHHHhcCCC
Confidence            999999999999988      557999999999999999999999999965

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=99.95  E-value=7.2e-27  Score=286.35  Aligned_cols=250  Identities=12%  Similarity=0.002  Sum_probs=188.4

Q ss_pred             ccccchhhccCCc--HHHHHHHHCCCCcccCCCCCCCChhHHHHHh---cCCcccceeeeeeccCCCCCCcccCCCCCCc
Q 001410          527 VAKCKWSCMFAEV--EVPAEVLADGVLCCRIPPHAVGRVPFYITCS---NRLACSEVREFDYIVGSVKDADISDIYGSST  601 (1082)
Q Consensus       527 ~~~~~~ac~fG~v--eVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~---~g~~csevv~feyl~~~~a~vn~~d~~g~~~  601 (1082)
                      .+++++||..|+.  ++++.|++.|++  .+.++..|.||||+|+.   +++  .+++.+  +...+.. +.   .....
T Consensus       213 ~TPLH~Aa~~g~~~~eIVklLLe~GAD--VN~kD~~G~TPLh~Ai~~a~n~~--~EIvki--Lie~~d~-n~---~~~~~  282 (764)
T PHA02716        213 ITPLHTYLITGNVCASVIKKIIELGGD--MDMKCVNGMSPIMTYIINIDNIN--PEITNI--YIESLDG-NK---VKNIP  282 (764)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHHHcCCC--CCCCCCCCCCHHHHHHHhhhccC--HHHHHH--HHHhccc-cc---cccch
Confidence            3567899999965  899999999999  77889999999999864   334  455442  2221111 10   01011


Q ss_pred             chhHH--------HHHHHHHHHhCCCCCCCCccccccHHHHHHHh--cccchHHHHHHHhhcCCCCccCcCcchhHHHHH
Q 001410          602 SESFL--------HLRLERILSMRSSPQNHLSEGLCEKQKLISKI--IQLKEEEESYQMVEANPEKNLSQHVEKYQILQK  671 (1082)
Q Consensus       602 t~Lhl--------~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~--~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~  671 (1082)
                      ..++.        +..++++|+..|+..+..+..|.||||+|+..  ++  .+.+++|++.|++++..+..+.  ++++.
T Consensus       283 ~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~~--~eIVklLLe~GADIN~kD~~G~--TPLH~  358 (764)
T PHA02716        283 MILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNIS--TDIIKLLHEYGNDLNEPDNIGN--TVLHT  358 (764)
T ss_pred             hhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCCC--chHHHHHHHcCCCCccCCCCCC--CHHHH
Confidence            22221        46889999999988888899999999987653  34  4889999999999888775443  33433


Q ss_pred             HHH-------------HhcHHHHHHHHHHCCCCCCccCCCCCcHHHHH----HHcCCHHHHHHHHhCCC-----------
Q 001410          672 IMK-------------EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLA----ASLGYDWAIKPTVTAGV-----------  723 (1082)
Q Consensus       672 ~a~-------------~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlA----a~~G~~~iv~~LL~~Ga-----------  723 (1082)
                      ++.             ..+...++++|++.|++++.+|..|+||||.+    ...++.+++++|+..|+           
T Consensus       359 A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G~TPLh~y~~~a~n~~~~dIvklLis~~~~~~~~~~~~q~  438 (764)
T PHA02716        359 YLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLGYTPLTSYICTAQNYMYYDIIDCLISDKVLNMVKHRILQD  438 (764)
T ss_pred             HHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCCCChHHHHHHHHHhcChHHHHHHHHhCcchhhhhhhhhhh
Confidence            332             13567899999999999999999999999932    22467788888777543           


Q ss_pred             --------------------------------------------------CccccCCCCCCHHHHHHHcCCHH-----HH
Q 001410          724 --------------------------------------------------SINFRDLSGWTALHWAAYCGREK-----TV  748 (1082)
Q Consensus       724 --------------------------------------------------dvn~~D~~G~TpLH~Aa~~G~~~-----iV  748 (1082)
                                                                        ++|..|..|+||||+|+..|+.+     ++
T Consensus       439 ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~  518 (764)
T PHA02716        439 LLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSF  518 (764)
T ss_pred             hhhccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHH
Confidence                                                              34556889999999999999874     45


Q ss_pred             HHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCH-----HHHHHHHHcCCC
Q 001410          749 AVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK-----GISGFLAESSLT  796 (1082)
Q Consensus       749 ~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~-----~iv~~LLe~Ga~  796 (1082)
                      ++|++.||++|+      +|..|+||||+|+.+|+.     +++++||++|++
T Consensus       519 k~LL~~GADIN~------~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~  565 (764)
T PHA02716        519 VYLLSIQYNINI------PTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPN  565 (764)
T ss_pred             HHHHhCCCCCcc------cCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCC
Confidence            999999999998      557999999999999976     999999999965

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.95  E-value=3.4e-27  Score=277.49  Aligned_cols=286  Identities=18%  Similarity=0.114  Sum_probs=238.4

Q ss_pred             cccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH-
Q 001410          528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-  606 (1082)
Q Consensus       528 ~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl-  606 (1082)
                      ++++||+.....+.+..|++.|++  ..+.+..+.+|||+|+..+.  ....  ..++..++++|..|..|  .||+|+ 
T Consensus        90 ~~l~~a~~~~~~~~i~~Lls~gad--~~~~n~~~~aplh~A~~~~~--~s~L--~~Ll~~~~dvnl~de~~--~TpLh~A  161 (929)
T KOG0510|consen   90 TPLHAAVEYNQGDKIQVLLSYGAD--TPLRNLNKNAPLHLAADSGN--YSCL--KLLLDYGADVNLEDENG--FTPLHLA  161 (929)
T ss_pred             chhHHHhhcchHHHHHHHHhcCCC--CChhhhhccCchhhccccch--HHHH--HHHHHhcCCccccccCC--CchhhHH
Confidence            567899999999999999999999  77779999999999998655  3332  24667779999998887  999999 


Q ss_pred             ----HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHh-----hcCCCCccCcCcchhHHHHHHHHHhc
Q 001410          607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMV-----EANPEKNLSQHVEKYQILQKIMKEKL  677 (1082)
Q Consensus       607 ----~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~-----~ga~~n~~~~~~~~~~~l~~~a~~~~  677 (1082)
                          +.+..++|+..++++...+..|+.++|.|+..+.  .+..+..+.     .+..+|-.+   ..+.++++.+.+++
T Consensus       162 ~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~aa~s~s--~e~mEi~l~~~g~~r~~~in~~~---n~~~~pLhlAve~g  236 (929)
T KOG0510|consen  162 ARKNKVEAKKELINKGADPCKSDIDGNFPIHEAARSGS--KECMEIFLPEHGYERQTHINFDN---NEKATPLHLAVEGG  236 (929)
T ss_pred             HhcChHHHHHHHHhcCCCCCcccCcCCchHHHHHHhcc--hhhhhhhhccccchhhccccccc---CCCCcchhhhhhcC
Confidence                6678899999999999999999999999999999  488887775     344454444   34467888899999


Q ss_pred             HHHHHHHHHHCCCC---------------CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHc
Q 001410          678 YSWLLRKVCEDGKG---------------PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC  742 (1082)
Q Consensus       678 ~~~lv~~Lle~Gad---------------~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~  742 (1082)
                      ...+++.+++.|+.               +|..|.+|.||||+||..|+.+++..|+..|++++.+++++.||||.||.+
T Consensus       237 ~~e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~y  316 (929)
T KOG0510|consen  237 DIEMLKMCLQNGKKIADVQLDAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIY  316 (929)
T ss_pred             CHHHHHHHHhCccccchhhhHHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHc
Confidence            99999999988754               455789999999999999999999999999999999999999999999999


Q ss_pred             CCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHH---
Q 001410          743 GREKTVAVLLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA---  818 (1082)
Q Consensus       743 G~~~iV~~LL~-~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~---  818 (1082)
                      |+.++|+-||+ .|..  .   .+..|-.|.||||+|+..||..++++|+.+|+..+.  ....|..|.||||.|+.   
T Consensus       317 g~~ntv~rLL~~~~~r--l---lne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~--~~e~D~dg~TaLH~Aa~~g~  389 (929)
T KOG0510|consen  317 GRINTVERLLQESDTR--L---LNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLN--MSEADSDGNTALHLAAKYGN  389 (929)
T ss_pred             ccHHHHHHHHhCcCcc--c---cccccccCCCchhhhhhcCHHHHHHHHHhcChhhhc--ccccccCCchhhhHHHHhcc
Confidence            99999999998 3332  2   234788999999999999999999999999976331  11348889999999985   


Q ss_pred             -HHHHHHHHhcCCCCC
Q 001410          819 -KAVQTVSEKTATPAN  833 (1082)
Q Consensus       819 -~~v~~Lle~~a~~~a  833 (1082)
                       .+++.|+..|++.+.
T Consensus       390 ~~av~~Li~~Ga~I~~  405 (929)
T KOG0510|consen  390 TSAVQKLISHGADIGV  405 (929)
T ss_pred             HHHHHHHHHcCCceee
Confidence             456666666666644

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.94  E-value=2e-27  Score=237.59  Aligned_cols=213  Identities=23%  Similarity=0.229  Sum_probs=167.7

Q ss_pred             cchhhccCCcHHHHHHHHCCCCcccCCC-CCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHHH
Q 001410          530 CKWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHL  608 (1082)
Q Consensus       530 ~~~ac~fG~veVv~~LLq~Gv~~C~~p~-~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~~  608 (1082)
                      .+..|+.-...-+.++++.... -.+.. +.+|+||||+||+-|+  .+|+.|+.. ..+..+|-+|..|          
T Consensus         7 ~~~~~~~~~~~kveel~~s~~k-SL~~r~dqD~Rt~LHwa~S~g~--~eiv~fLls-q~nv~~ddkDdaG----------   72 (226)
T KOG4412|consen    7 GKAICENCEEFKVEELIQSDPK-SLNARDDQDGRTPLHWACSFGH--VEIVYFLLS-QPNVKPDDKDDAG----------   72 (226)
T ss_pred             HHHHHhhchHHHHHHHHhcChh-hhhccccccCCceeeeeeecCc--hhHHHHHHh-cCCCCCCCccccC----------
Confidence            3466777777788888876642 13334 5699999999999999  888775543 3333444333333          


Q ss_pred             HHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHC
Q 001410          609 RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED  688 (1082)
Q Consensus       609 rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~  688 (1082)
                                          .+|||.|+..+.  .+                                    +|+.|+.+
T Consensus        73 --------------------WtPlhia~s~g~--~e------------------------------------vVk~Ll~r   94 (226)
T KOG4412|consen   73 --------------------WTPLHIAASNGN--DE------------------------------------VVKELLNR   94 (226)
T ss_pred             --------------------CchhhhhhhcCc--HH------------------------------------HHHHHhcC
Confidence                                444455555554  23                                    34555555


Q ss_pred             -CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 001410          689 -GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE  767 (1082)
Q Consensus       689 -Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~  767 (1082)
                       |+++|..+..|+|+||||+..|..+++++|+++|+.|+.+|..|.||||-||..|..+++++|+..|+.+|.      +
T Consensus        95 ~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a~~n~------q  168 (226)
T KOG4412|consen   95 SGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGAPLNT------Q  168 (226)
T ss_pred             CCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCCCCCc------c
Confidence             889999999999999999999999999999999999999999999999999999999999999999999988      7


Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHH
Q 001410          768 FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSE  826 (1082)
Q Consensus       768 D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle  826 (1082)
                      |..|+||||.|...||.+++.+|+++|+     ++++.|++| ||+.++.......+.+
T Consensus       169 Dk~G~TpL~~al~e~~~d~a~lLV~~gA-----d~~~edke~-t~~~~a~~~l~~alk~  221 (226)
T KOG4412|consen  169 DKYGFTPLHHALAEGHPDVAVLLVRAGA-----DTDREDKEG-TALRIACNELLEALKE  221 (226)
T ss_pred             cccCccHHHHHHhccCchHHHHHHHhcc-----ceeeccccC-chHHHHHHHHHHHHHH
Confidence            7899999999999999999999999994     488899977 9988876555444433

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.94  E-value=1.9e-26  Score=270.61  Aligned_cols=240  Identities=14%  Similarity=0.072  Sum_probs=196.8

Q ss_pred             ccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHHH
Q 001410          529 KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHL  608 (1082)
Q Consensus       529 ~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~~  608 (1082)
                      .++-||.+|+.+++..|++.|++  .+.....|.||||+|+..++  .+++.  ++...|++++.               
T Consensus         5 ~L~~A~~~g~~~iv~~Ll~~g~~--~n~~~~~g~tpL~~A~~~~~--~~~v~--~Ll~~ga~~~~---------------   63 (413)
T PHA02875          5 ALCDAILFGELDIARRLLDIGIN--PNFEIYDGISPIKLAMKFRD--SEAIK--LLMKHGAIPDV---------------   63 (413)
T ss_pred             HHHHHHHhCCHHHHHHHHHCCCC--CCccCCCCCCHHHHHHHcCC--HHHHH--HHHhCCCCccc---------------
Confidence            35689999999999999999998  55567789999999998877  44443  44444444433               


Q ss_pred             HHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHC
Q 001410          609 RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED  688 (1082)
Q Consensus       609 rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~  688 (1082)
                                     ....+.+++|+|+..++.  +.+++|+..+...+....  ..+.++++.+...+...++++|++.
T Consensus        64 ---------------~~~~~~t~L~~A~~~g~~--~~v~~Ll~~~~~~~~~~~--~~g~tpL~~A~~~~~~~iv~~Ll~~  124 (413)
T PHA02875         64 ---------------KYPDIESELHDAVEEGDV--KAVEELLDLGKFADDVFY--KDGMTPLHLATILKKLDIMKLLIAR  124 (413)
T ss_pred             ---------------cCCCcccHHHHHHHCCCH--HHHHHHHHcCCccccccc--CCCCCHHHHHHHhCCHHHHHHHHhC
Confidence                           334457889999999984  889999988876554321  2234666667777788899999999


Q ss_pred             CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 001410          689 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF  768 (1082)
Q Consensus       689 Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D  768 (1082)
                      |++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++..+      
T Consensus       125 gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~~n~~~------  198 (413)
T PHA02875        125 GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFG------  198 (413)
T ss_pred             CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCcCC------
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999854      


Q ss_pred             CCC-CCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHH
Q 001410          769 PLS-RTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDS  816 (1082)
Q Consensus       769 ~~G-~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a  816 (1082)
                      ..| .||+|+|+..|+.+++++|+++|+++..  ++..+..+.|+++..
T Consensus       199 ~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~--~~~~~~~~~t~l~~~  245 (413)
T PHA02875        199 KNGCVAALCYAIENNKIDIVRLFIKRGADCNI--MFMIEGEECTILDMI  245 (413)
T ss_pred             CCCCchHHHHHHHcCCHHHHHHHHHCCcCcch--HhhcCCCchHHHHHH
Confidence            355 5899999999999999999999977443  233456678888764

>PHA02791 ankyrin-like protein; Provisional

Probab=99.94  E-value=9.4e-26  Score=251.45  Aligned_cols=237  Identities=9%  Similarity=0.007  Sum_probs=185.9

Q ss_pred             cCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHHHHHHHHHH
Q 001410          536 FAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILS  615 (1082)
Q Consensus       536 fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~~rlvkLLl  615 (1082)
                      .|..+++..|++.|..    ..+..|.||||+||..++  .+++.  +++..+++++..                     
T Consensus         9 ~~~~~~~~~Lis~~a~----~~D~~G~TpLh~Aa~~g~--~eiv~--~Ll~~ga~~n~~---------------------   59 (284)
T PHA02791          9 WKSKQLKSFLSSKDAF----KADVHGHSALYYAIADNN--VRLVC--TLLNAGALKNLL---------------------   59 (284)
T ss_pred             cCHHHHHHHHHhCCCC----CCCCCCCcHHHHHHHcCC--HHHHH--HHHHCcCCCcCC---------------------
Confidence            4677899999998875    468889999999999887  55544  334434433321                     


Q ss_pred             hCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCcc
Q 001410          616 MRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCIL  695 (1082)
Q Consensus       616 ~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~  695 (1082)
                                 .+.||||+|+..++  .++++.|+..|++++..+..   +.++++.+...+...++++|++.|++++.+
T Consensus        60 -----------d~~TpLh~Aa~~g~--~eiV~lLL~~Gadvn~~d~~---G~TpLh~Aa~~g~~eivk~Ll~~gadin~~  123 (284)
T PHA02791         60 -----------ENEFPLHQAATLED--TKIVKILLFSGMDDSQFDDK---GNTALYYAVDSGNMQTVKLFVKKNWRLMFY  123 (284)
T ss_pred             -----------CCCCHHHHHHHCCC--HHHHHHHHHCCCCCCCCCCC---CCCHHHHHHHcCCHHHHHHHHHCCCCcCcc
Confidence                       24688888888888  48888888888888776643   446677777777888899999999999999


Q ss_pred             CCCCC-cHHHHHHHcCCHHHHHHHHhCCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 001410          696 DDEGQ-GVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRT  773 (1082)
Q Consensus       696 d~~G~-TpLHlAa~~G~~~iv~~LL~~Gadvn~~D-~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~T  773 (1082)
                      +..|+ ||||+||..|+.++|++||++|.+.  .| ..|.||||+||..|+.++|++||++||+++.      +|..|.|
T Consensus       124 ~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd~n~------~d~~g~t  195 (284)
T PHA02791        124 GKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDYMTSTNT------NNSLLFI  195 (284)
T ss_pred             CCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHCCCCCCc------ccCCCCC
Confidence            88885 8999999999999999999987643  23 3589999999999999999999999999887      4568887


Q ss_pred             H-HHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHHhcCCCCC
Q 001410          774 P-SDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPAN  833 (1082)
Q Consensus       774 P-LhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle~~a~~~a  833 (1082)
                      | ||+|+..|+.+++++|+++|++     ++.+|. +.+++  ...+.++.|++.-++...
T Consensus       196 ~~L~~Aa~~~~~e~v~lLl~~Ga~-----in~~~~-~~~~l--~~~e~~~~ll~~~~~~~~  248 (284)
T PHA02791        196 PDIKLAIDNKDLEMLQALFKYDIN-----IYSVNL-ENVLL--DDAEIAKMIIEKHVEYKS  248 (284)
T ss_pred             hHHHHHHHcCCHHHHHHHHHCCCC-----CccCcc-cCccC--CCHHHHHHHHHhhhhhcc
Confidence            6 9999999999999999998855     777777 34555  455688888887765443

>PHA02730 ankyrin-like protein; Provisional

Probab=99.94  E-value=8e-26  Score=272.56  Aligned_cols=303  Identities=12%  Similarity=0.066  Sum_probs=234.6

Q ss_pred             cccchhhccC---CcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCC--CCCCcccCCCCCCcc
Q 001410          528 AKCKWSCMFA---EVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGS--VKDADISDIYGSSTS  602 (1082)
Q Consensus       528 ~~~~~ac~fG---~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~--~a~vn~~d~~g~~~t  602 (1082)
                      +.++||+..|   +.++++.||+.|++  ....+..|.||||+|+..++.-.++++  +++..  +++++..+..+  .+
T Consensus        43 TaLh~A~~~~~~~~~eivklLLs~GAd--in~kD~~G~TPLh~Aa~~~~~~~eIv~--~Ll~~~~~~~~~~~~~~~--d~  116 (672)
T PHA02730         43 NALHCYVSNKCDTDIKIVRLLLSRGVE--RLCRNNEGLTPLGVYSKRKYVKSQIVH--LLISSYSNASNELTSNIN--DF  116 (672)
T ss_pred             cHHHHHHHcCCcCcHHHHHHHHhCCCC--CcccCCCCCChHHHHHHcCCCcHHHHH--HHHhcCCCCCcccccccC--Cc
Confidence            4578999987   58999999999999  778899999999999986631167776  55555  44557666445  67


Q ss_pred             hhHH-------HHHHHHHHHh-CCCCCCCCc-----cccccHHHHHHHhcccchHHHHHHHhhcCCCCccC-----cCcc
Q 001410          603 ESFL-------HLRLERILSM-RSSPQNHLS-----EGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLS-----QHVE  664 (1082)
Q Consensus       603 ~Lhl-------~~rlvkLLl~-~ga~~~~~~-----~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~-----~~~~  664 (1082)
                      +++.       +.+++++|+. ++.+.+...     ..|.++++++...+.  .++++.|++.|++++...     .+..
T Consensus       117 ~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~--~eIvklLi~~g~~v~g~~~~~~~~~~~  194 (672)
T PHA02730        117 DLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPR--PEVLLWLLKSECYSTGYVFRSCMYDSD  194 (672)
T ss_pred             hHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCc--hHHHHHHHHcCCcccccccccccccCC
Confidence            7777       4579999996 554444432     378899999999999  599999999999986331     2222


Q ss_pred             hh-HHHH-----HHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHH--HHHcCCHHHHHHHHh----------------
Q 001410          665 KY-QILQ-----KIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHL--AASLGYDWAIKPTVT----------------  720 (1082)
Q Consensus       665 ~~-~~l~-----~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHl--Aa~~G~~~iv~~LL~----------------  720 (1082)
                      .. +.++     +.........++++|+.+|+++|.+|..|.||||+  |+..|+.++|++|++                
T Consensus       195 ~c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~~~~~~~~  274 (672)
T PHA02730        195 RCKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYDDISQPYI  274 (672)
T ss_pred             ccchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccccccchhh
Confidence            22 2222     22245667789999999999999999999999995  556688999999999                


Q ss_pred             ----------------CCCCccc--------------------cCCCCCC---------------------HHHHHHHcC
Q 001410          721 ----------------AGVSINF--------------------RDLSGWT---------------------ALHWAAYCG  743 (1082)
Q Consensus       721 ----------------~Gadvn~--------------------~D~~G~T---------------------pLH~Aa~~G  743 (1082)
                                      +|+|+..                    .|..|.+                     .||.-...|
T Consensus       275 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y~~~~  354 (672)
T PHA02730        275 RGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINYLHYG  354 (672)
T ss_pred             hhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHHHhcC
Confidence                            7998877                    6777765                     677766655


Q ss_pred             ---CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCcccccCccCCCCCCcHHHH-
Q 001410          744 ---REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH----KGISGFLAESSLTSLLLSLKMNDSADDGALED-  815 (1082)
Q Consensus       744 ---~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~----~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~-  815 (1082)
                         +.++|++|+++||++|..       ..|.||||+|+..++    .+++++|+++|+.   .+++.+|..|.||+|. 
T Consensus       355 ~~v~ieIvelLIs~GAdIN~k-------~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~---~dIN~kd~~G~T~Lh~~  424 (672)
T PHA02730        355 DMVSIPILRCMLDNGATMDKT-------TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGH---MAINHVSNNGRLCMYGL  424 (672)
T ss_pred             CcCcHHHHHHHHHCCCCCCcC-------CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCC---ccccccccCCCchHhHH
Confidence               689999999999999972       489999999998885    8999999999864   4688899999999983 


Q ss_pred             --HH-------------HHHHHHHHHhcCCCCCCCCcccccccccchhhhhhhhhh
Q 001410          816 --SI-------------AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQA  856 (1082)
Q Consensus       816 --a~-------------~~~v~~Lle~~a~~~a~~~~e~~~~lkdsltav~~Aaqa  856 (1082)
                        +.             ..+++.|+..+++.++        ....+.||++.|+..
T Consensus       425 i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINa--------kD~~G~TPLh~Aa~~  472 (672)
T PHA02730        425 ILSRFNNCGYHCYETILIDVFDILSKYMDDIDM--------IDNENKTLLYYAVDV  472 (672)
T ss_pred             HHHHhccccccccchhHHHHHHHHHhcccchhc--------cCCCCCCHHHHHHHh
Confidence              21             1236788888886665        356789999998763

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.94  E-value=1.2e-25  Score=270.13  Aligned_cols=272  Identities=8%  Similarity=-0.033  Sum_probs=216.6

Q ss_pred             hccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHH------
Q 001410          534 CMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH------  607 (1082)
Q Consensus       534 c~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~------  607 (1082)
                      +..++.++++.||+.|++  .+.. ..|.||||+++..+....++++  +++..|+++|..+ .+  .||||..      
T Consensus        11 ~~~~~~~~v~~LL~~Gad--vN~~-~~g~t~l~~~~~~~~~~~~iv~--~Ll~~GAdvn~~~-~~--~tpL~~a~~~~~~   82 (494)
T PHA02989         11 SDTVDKNALEFLLRTGFD--VNEE-YRGNSILLLYLKRKDVKIKIVK--LLIDNGADVNYKG-YI--ETPLCAVLRNREI   82 (494)
T ss_pred             CCcCcHHHHHHHHHcCCC--cccc-cCCCCHHHHHHhcCCCChHHHH--HHHHcCCCccCCC-CC--CCcHHHHHhccCc
Confidence            446888999999999999  4444 5699999876654331256665  7788899999875 33  6888873      


Q ss_pred             -----HHHHHHHHhCCCCCCCCccccccHHHHHHHh---cccchHHHHHHHhhcCCC-CccCcCcchhHHHHHHHHH-hc
Q 001410          608 -----LRLERILSMRSSPQNHLSEGLCEKQKLISKI---IQLKEEEESYQMVEANPE-KNLSQHVEKYQILQKIMKE-KL  677 (1082)
Q Consensus       608 -----~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~---~~l~~e~~~~Ll~~ga~~-n~~~~~~~~~~~l~~~a~~-~~  677 (1082)
                           .+++++|+..|++.+..+..|.||||+|...   +.  .+.+++|+++|+++ +..+..+.  ++++.++.. .+
T Consensus        83 ~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~--~eiv~~Ll~~Gadin~~~d~~g~--tpLh~a~~~~~~  158 (494)
T PHA02989         83 TSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINN--CDMLRFLLSKGINVNDVKNSRGY--NLLHMYLESFSV  158 (494)
T ss_pred             chhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCc--HHHHHHHHHCCCCcccccCCCCC--CHHHHHHHhccC
Confidence                 3689999999998999999999999987755   34  48999999999999 55553332  344434333 35


Q ss_pred             HHHHHHHHHHCCCCCCc-cCCCCCcHHHHHHHcC----CHHHHHHHHhCCCCccccCCCCCCHHHHHHHcC------CHH
Q 001410          678 YSWLLRKVCEDGKGPCI-LDDEGQGVLHLAASLG----YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCG------REK  746 (1082)
Q Consensus       678 ~~~lv~~Lle~Gad~n~-~d~~G~TpLHlAa~~G----~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G------~~~  746 (1082)
                      ...++++|++.|++++. .+..|.||||+|+..+    +.+++++|+++|+++|.+|..|.||||.++..+      ..+
T Consensus       159 ~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~  238 (494)
T PHA02989        159 KKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFK  238 (494)
T ss_pred             CHHHHHHHHHcCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchH
Confidence            77899999999999998 6889999999998764    889999999999999999999999999877643      467


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHH
Q 001410          747 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSE  826 (1082)
Q Consensus       747 iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle  826 (1082)
                      ++.+|+. |+++|.      +|..|.||||+|+..|+.+++++|++.|+     +++.+|..|.||++.|.......+++
T Consensus       239 il~~l~~-~advn~------~d~~G~TpL~~Aa~~~~~~~v~~LL~~Ga-----din~~d~~G~TpL~~A~~~~~~~iv~  306 (494)
T PHA02989        239 VLNFILK-YIKINK------KDKKGFNPLLISAKVDNYEAFNYLLKLGD-----DIYNVSKDGDTVLTYAIKHGNIDMLN  306 (494)
T ss_pred             HHHHHHh-CCCCCC------CCCCCCCHHHHHHHhcCHHHHHHHHHcCC-----CccccCCCCCCHHHHHHHcCCHHHHH
Confidence            7776665 799888      56799999999999999999999999995     48889999999999998655555444


Q ss_pred             hcC
Q 001410          827 KTA  829 (1082)
Q Consensus       827 ~~a  829 (1082)
                      .+.
T Consensus       307 ~LL  309 (494)
T PHA02989        307 RIL  309 (494)
T ss_pred             HHH
Confidence            443

>PHA02874 ankyrin repeat protein; Provisional

Probab=99.94  E-value=9.8e-26  Score=266.59  Aligned_cols=250  Identities=14%  Similarity=0.011  Sum_probs=213.4

Q ss_pred             cccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeee---------------------ccC
Q 001410          528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDY---------------------IVG  586 (1082)
Q Consensus       528 ~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~fey---------------------l~~  586 (1082)
                      +++++||..|+.++++.|+..|+.  ....+..|.||||+|+..++  .+++.++.                     +..
T Consensus        37 tpL~~A~~~g~~~iv~~Ll~~Ga~--~n~~~~~~~t~L~~A~~~~~--~~iv~~Ll~~g~~~~~~~~~~~~~~~i~~ll~  112 (434)
T PHA02874         37 TPLIDAIRSGDAKIVELFIKHGAD--INHINTKIPHPLLTAIKIGA--HDIIKLLIDNGVDTSILPIPCIEKDMIKTILD  112 (434)
T ss_pred             CHHHHHHHcCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHcCC--HHHHHHHHHCCCCCCcchhccCCHHHHHHHHH
Confidence            447799999999999999999998  66778889999999999988  66655322                     223


Q ss_pred             CCCCCcccCCCCCCcchhHH-----HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCc
Q 001410          587 SVKDADISDIYGSSTSESFL-----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQ  661 (1082)
Q Consensus       587 ~~a~vn~~d~~g~~~t~Lhl-----~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~  661 (1082)
                      .|++++..+..|  .|+||+     +.+++++|+..|+..+..+..|.+|+|+|+..+..  +.+++|++.|++.+..+.
T Consensus       113 ~g~d~n~~~~~g--~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~--~iv~~Ll~~g~~~n~~~~  188 (434)
T PHA02874        113 CGIDVNIKDAEL--KTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFF--DIIKLLLEKGAYANVKDN  188 (434)
T ss_pred             CcCCCCCCCCCC--ccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcH--HHHHHHHHCCCCCCCCCC
Confidence            345566666666  899998     57899999999988888889999999999999984  999999999998877664


Q ss_pred             CcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHH
Q 001410          662 HVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY  741 (1082)
Q Consensus       662 ~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~  741 (1082)
                      .   +.++++.+...+...++++|++.|++++.++..|.||||+|+..+. .++.+|+ .|++++.+|..|+||||+|+.
T Consensus       189 ~---g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~d~~G~TpLh~A~~  263 (434)
T PHA02874        189 N---GESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQDIDGSTPLHHAIN  263 (434)
T ss_pred             C---CCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCcCCCCCCHHHHHHh
Confidence            3   3467777777888899999999999999999999999999999876 5666666 699999999999999999998


Q ss_pred             cC-CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC-CHHHHHHHHHcCCC
Q 001410          742 CG-REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG-HKGISGFLAESSLT  796 (1082)
Q Consensus       742 ~G-~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G-~~~iv~~LLe~Ga~  796 (1082)
                      .+ +.+++++|+.+|++++.      +|..|.||||+|+..+ +..+++.|+..+..
T Consensus       264 ~~~~~~iv~~Ll~~gad~n~------~d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~  314 (434)
T PHA02874        264 PPCDIDIIDILLYHKADISI------KDNKGENPIDTAFKYINKDPVIKDIIANAVL  314 (434)
T ss_pred             cCCcHHHHHHHHHCcCCCCC------CCCCCCCHHHHHHHhCCccHHHHHHHHhcCc
Confidence            76 78999999999999998      5579999999999987 67899999987743

>PHA02917 ankyrin-like protein; Provisional

Probab=99.93  E-value=8.5e-25  Score=269.11  Aligned_cols=303  Identities=14%  Similarity=0.064  Sum_probs=214.0

Q ss_pred             cccchhhc---cCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceee--eeeccCCCCCCcccCCCCCCcc
Q 001410          528 AKCKWSCM---FAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVRE--FDYIVGSVKDADISDIYGSSTS  602 (1082)
Q Consensus       528 ~~~~~ac~---fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~--feyl~~~~a~vn~~d~~g~~~t  602 (1082)
                      +++||||.   +|+.++++.||+.|++  ....+..|.||||+|+..|+  .+++.  +++++..+..++..+..    +
T Consensus        34 t~Lh~a~~~~~~~~~~~v~~Ll~~ga~--v~~~~~~g~TpL~~Aa~~g~--~~v~~~~~~~Ll~~~~~~n~~~~~----~  105 (661)
T PHA02917         34 NALHAYLFNEHCNNVEVVKLLLDSGTN--PLHKNWRQLTPLEEYTNSRH--VKVNKDIAMALLEATGYSNINDFN----I  105 (661)
T ss_pred             cHHHHHHHhhhcCcHHHHHHHHHCCCC--ccccCCCCCCHHHHHHHcCC--hhHHHHHHHHHHhccCCCCCCCcc----h
Confidence            34678655   5889999999999999  56678899999999999887  33321  22444433334443321    2


Q ss_pred             hhHH-----HHHHHHHHHhCCCCCCCCccccccHHHHHHH--hcccchHHHHHHHhhcCCCCccCcCcch----------
Q 001410          603 ESFL-----HLRLERILSMRSSPQNHLSEGLCEKQKLISK--IIQLKEEEESYQMVEANPEKNLSQHVEK----------  665 (1082)
Q Consensus       603 ~Lhl-----~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~--~~~l~~e~~~~Ll~~ga~~n~~~~~~~~----------  665 (1082)
                      +++.     +.+++++|+..|++.+..+..|.|+||+++.  .++  .+++++|+++|++++..+..+..          
T Consensus       106 ~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~--~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~  183 (661)
T PHA02917        106 FSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPV--PEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPR  183 (661)
T ss_pred             HHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCC--HHHHHHHHHcCCCcccccccccccccccccccc
Confidence            2332     6799999999999999999999999996543  456  59999999999998865432221          


Q ss_pred             --hHHHHHHHHH----------hcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCH--HHHHHHHhCCCCcc----c
Q 001410          666 --YQILQKIMKE----------KLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYD--WAIKPTVTAGVSIN----F  727 (1082)
Q Consensus       666 --~~~l~~~a~~----------~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~--~iv~~LL~~Gadvn----~  727 (1082)
                        .++++.++..          .++..++++|++.|+++|.+|..|.||||+|+..|+.  ++|++|+. |++++    .
T Consensus       184 ~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~  262 (661)
T PHA02917        184 NCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYI  262 (661)
T ss_pred             ccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccc
Confidence              2444444432          3477899999999999999999999999999999985  79999875 88775    3


Q ss_pred             cCCCCCCHHHHHHH----------------------------------------------------------------cC
Q 001410          728 RDLSGWTALHWAAY----------------------------------------------------------------CG  743 (1082)
Q Consensus       728 ~D~~G~TpLH~Aa~----------------------------------------------------------------~G  743 (1082)
                      .|..|.||+|+|++                                                                .|
T Consensus       263 ~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g  342 (661)
T PHA02917        263 DDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMTFG  342 (661)
T ss_pred             cCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHHcC
Confidence            55667777777773                                                                11


Q ss_pred             C--HHHHHHHHHcCCCCCCCC------------------------CCCCCCCCCCCHHHHHHHcC---------------
Q 001410          744 R--EKTVAVLLSLGAAPGLLT------------------------DPSPEFPLSRTPSDLASSNG---------------  782 (1082)
Q Consensus       744 ~--~~iV~~LL~~GAd~n~~~------------------------d~~~~D~~G~TPLhlAa~~G---------------  782 (1082)
                      .  .++|++||++||++|..+                        +...++.+|.||||.|+..+               
T Consensus       343 ~~~~~~v~~Ll~~GAdvn~~~~~g~~~~~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~~~~~~~  422 (661)
T PHA02917        343 DIDIPLVECMLEYGAVVNKEAIHGYFRNINIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTYTYKKGL  422 (661)
T ss_pred             CCcHHHHHHHHHcCCCCCCCCccccchhhcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhhhhhhcc
Confidence            1  236677777777766542                        12234556888888876432               


Q ss_pred             --------CHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHH----HHHHHHHHHhcCCCCCCCCcccccccccchhhh
Q 001410          783 --------HKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAI  850 (1082)
Q Consensus       783 --------~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~a~~~~e~~~~lkdsltav  850 (1082)
                              ..+++++|+++|     +++|.+|..|.||+|.|+    ...++.|++.|++.+.        ....+.|++
T Consensus       423 ~~~~~~~~~~~~v~~Ll~~G-----AdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~--------~d~~G~T~L  489 (661)
T PHA02917        423 CDMSYACPILSTINICLPYL-----KDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNI--------RSNNGYTCI  489 (661)
T ss_pred             chhhhhhhhHHHHHHHHHCC-----CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCC--------CCCCCCCHH
Confidence                    245678888777     447888888888888876    4456667777766554        234577777


Q ss_pred             hhhh
Q 001410          851 CNAT  854 (1082)
Q Consensus       851 ~~Aa  854 (1082)
                      +.|.
T Consensus       490 ~~A~  493 (661)
T PHA02917        490 AIAI  493 (661)
T ss_pred             HHHH
Confidence            7775

>PHA02791 ankyrin-like protein; Provisional

Probab=99.93  E-value=9.9e-25  Score=243.28  Aligned_cols=208  Identities=14%  Similarity=0.059  Sum_probs=180.9

Q ss_pred             HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHH
Q 001410          607 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVC  686 (1082)
Q Consensus       607 ~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Ll  686 (1082)
                      ..+++++|++.++.  ..+..|.||||+|+..++  .+.++.|++.+++.+..+     +.++++.+...+...++++|+
T Consensus        11 ~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~--~eiv~~Ll~~ga~~n~~d-----~~TpLh~Aa~~g~~eiV~lLL   81 (284)
T PHA02791         11 SKQLKSFLSSKDAF--KADVHGHSALYYAIADNN--VRLVCTLLNAGALKNLLE-----NEFPLHQAATLEDTKIVKILL   81 (284)
T ss_pred             HHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCC--HHHHHHHHHCcCCCcCCC-----CCCHHHHHHHCCCHHHHHHHH
Confidence            45788999998763  467889999999999999  499999999998877643     246777777788889999999


Q ss_pred             HCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCC-CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCC
Q 001410          687 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGW-TALHWAAYCGREKTVAVLLSLGAAPGLLTDPS  765 (1082)
Q Consensus       687 e~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~-TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~  765 (1082)
                      ..|++++.+|..|+||||+||..|+.+++++|+++|++++.++..|+ ||||+|+..|+.++|++|+++|++..  +   
T Consensus        82 ~~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~--d---  156 (284)
T PHA02791         82 FSGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--D---  156 (284)
T ss_pred             HCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc--c---
Confidence            99999999999999999999999999999999999999999999996 89999999999999999999876431  1   


Q ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcH-HHHHH----HHHHHHHHHhcCCCCCCC
Q 001410          766 PEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGA-LEDSI----AKAVQTVSEKTATPANDN  835 (1082)
Q Consensus       766 ~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~ta-l~~a~----~~~v~~Lle~~a~~~a~~  835 (1082)
                        ...|.||||+|+.+|+.+++++|+++|++     ++.++..|.|| +|.|+    .+.++.|+++|+++++.+
T Consensus       157 --~~~g~TpLh~Aa~~g~~eiv~lLL~~gAd-----~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~  224 (284)
T PHA02791        157 --LAILLSCIHITIKNGHVDMMILLLDYMTS-----TNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVN  224 (284)
T ss_pred             --cccCccHHHHHHHcCCHHHHHHHHHCCCC-----CCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCc
Confidence              02589999999999999999999999955     78888888887 88877    688899999999888754

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.93  E-value=2.3e-25  Score=277.23  Aligned_cols=270  Identities=16%  Similarity=0.114  Sum_probs=237.9

Q ss_pred             ccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH--
Q 001410          529 KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--  606 (1082)
Q Consensus       529 ~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl--  606 (1082)
                      ..+.+|..|.++++..++..|.+  .+....+|.||||+|+..++  ..+++  .+.+.+++.+..+..|  .|++|+  
T Consensus       377 pl~la~~~g~~~~v~Lll~~ga~--~~~~gk~gvTplh~aa~~~~--~~~v~--l~l~~gA~~~~~~~lG--~T~lhvaa  448 (1143)
T KOG4177|consen  377 PLHLAVKSGRVSVVELLLEAGAD--PNSAGKNGVTPLHVAAHYGN--PRVVK--LLLKRGASPNAKAKLG--YTPLHVAA  448 (1143)
T ss_pred             chhhhcccCchhHHHhhhhccCC--cccCCCCCcceeeehhhccC--cceEE--EEeccCCChhhHhhcC--CChhhhhh
Confidence            46799999999999999999999  66778899999999999888  67766  4455779999999999  899988  


Q ss_pred             ----HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHH
Q 001410          607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLL  682 (1082)
Q Consensus       607 ----~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv  682 (1082)
                          +.+++.+++..+.+.+.....|.|+||++++.++  .+.+..+++.++..+...   ..+.+..+.+.......++
T Consensus       449 ~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh--~~~~~llle~~~~~~~~~---~~~l~~lhla~~~~~v~~~  523 (1143)
T KOG4177|consen  449 KKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGH--TEVVQLLLEGGANDNLDA---KKGLTPLHLAADEDTVKVA  523 (1143)
T ss_pred             hcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCC--chHHHHhhhcCCccCccc---hhccchhhhhhhhhhHHHH
Confidence                4567778888889999999999999999999999  588888886665555433   3446777888888888999


Q ss_pred             HHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 001410          683 RKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT  762 (1082)
Q Consensus       683 ~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~  762 (1082)
                      +.++++|++++.++..|.||||.||..|+..+|++||++|+|++.+|+.|+||||.||..|+.+|+.+|+++||++|+  
T Consensus       524 ~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~vna--  601 (1143)
T KOG4177|consen  524 KILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASVNA--  601 (1143)
T ss_pred             HHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCCCc--
Confidence            999999999999999999999999999999999999999999999999999999999999999999999999999999  


Q ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHH
Q 001410          763 DPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI  817 (1082)
Q Consensus       763 d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~  817 (1082)
                          .|.+|.||||+|+..|+..++++|+..+.++...+....+..|.+|.....
T Consensus       602 ----~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~~~~~~e~~~g~~p~~v~e  652 (1143)
T KOG4177|consen  602 ----ADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAATDPVKENRKGAVPEDVAE  652 (1143)
T ss_pred             ----ccccCcchhHHHHHhcccchhhHHHhccCccccccchhhhhcccChhhHHH
Confidence                557999999999999999999999999988744445666777889877654

>PHA02989 ankyrin repeat protein; Provisional

Probab=99.93  E-value=8.9e-25  Score=262.68  Aligned_cols=241  Identities=12%  Similarity=0.028  Sum_probs=198.0

Q ss_pred             CCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcc----cceeeeeeccCCCCCCcccCCCCCCcchhHH------
Q 001410          537 AEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLAC----SEVREFDYIVGSVKDADISDIYGSSTSESFL------  606 (1082)
Q Consensus       537 G~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~c----sevv~feyl~~~~a~vn~~d~~g~~~t~Lhl------  606 (1082)
                      |+.++++.|++.|++  .+..+ .|.||||.|+.++...    .+++  ++++..|+++|..|..|  .||||.      
T Consensus        48 ~~~~iv~~Ll~~GAd--vn~~~-~~~tpL~~a~~~~~~~~~~~~~iv--~~Ll~~Gadin~~d~~g--~tpL~~a~~~~~  120 (494)
T PHA02989         48 VKIKIVKLLIDNGAD--VNYKG-YIETPLCAVLRNREITSNKIKKIV--KLLLKFGADINLKTFNG--VSPIVCFIYNSN  120 (494)
T ss_pred             CChHHHHHHHHcCCC--ccCCC-CCCCcHHHHHhccCcchhhHHHHH--HHHHHCCCCCCCCCCCC--CcHHHHHHHhcc
Confidence            478999999999999  44333 5799999998876421    2344  47889999999999888  899885      


Q ss_pred             --HHHHHHHHHhCCCCC-CCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCcc-CcCcchhHHHHHHHHH----hcH
Q 001410          607 --HLRLERILSMRSSPQ-NHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNL-SQHVEKYQILQKIMKE----KLY  678 (1082)
Q Consensus       607 --~~rlvkLLl~~ga~~-~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~-~~~~~~~~~l~~~a~~----~~~  678 (1082)
                        ..+++++|+..|++. +..+..|.||||++......-.++++.|++.|++++.. +..   +.++++.+..    .+.
T Consensus       121 ~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~---g~tpL~~a~~~~~~~~~  197 (494)
T PHA02989        121 INNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLY---GLTPMNIYLRNDIDVIS  197 (494)
T ss_pred             cCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccccc---CCChHHHHHhccccccc
Confidence              358999999999887 78889999999998765321058999999999998873 322   2344443322    346


Q ss_pred             HHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC------CHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 001410          679 SWLLRKVCEDGKGPCILDDEGQGVLHLAASLG------YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL  752 (1082)
Q Consensus       679 ~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G------~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL  752 (1082)
                      ..++++|++.|+++|.+|..|.||||.++..+      ...++++|+ .|+++|.+|..|+||||+||..|+.++|++||
T Consensus       198 ~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~-~~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL  276 (494)
T PHA02989        198 IKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFIL-KYIKINKKDKKGFNPLLISAKVDNYEAFNYLL  276 (494)
T ss_pred             HHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHH-hCCCCCCCCCCCCCHHHHHHHhcCHHHHHHHH
Confidence            78999999999999999999999999877654      456777665 57999999999999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 001410          753 SLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS  794 (1082)
Q Consensus       753 ~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~G  794 (1082)
                      ++||+++.      +|..|.||||+|+..|+.++++.|++.+
T Consensus       277 ~~Gadin~------~d~~G~TpL~~A~~~~~~~iv~~LL~~~  312 (494)
T PHA02989        277 KLGDDIYN------VSKDGDTVLTYAIKHGNIDMLNRILQLK  312 (494)
T ss_pred             HcCCCccc------cCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            99999998      5579999999999999999999999876

>PHA02798 ankyrin-like protein; Provisional

Probab=99.93  E-value=7.9e-25  Score=262.78  Aligned_cols=250  Identities=12%  Similarity=0.057  Sum_probs=206.3

Q ss_pred             hhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhc-----CCcccceeeeeeccCCCCCCcccCCCCCCcchhHH
Q 001410          532 WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSN-----RLACSEVREFDYIVGSVKDADISDIYGSSTSESFL  606 (1082)
Q Consensus       532 ~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~-----g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl  606 (1082)
                      +++-.++.++++.|++.|++  .+..+..|.||||+|+.+     +.  .+++.  +++..|+++|..|.+|  .||||+
T Consensus        44 l~~~~~~~~iv~~Ll~~Gad--vn~~d~~g~TpL~~~~~n~~~~~~~--~~iv~--~Ll~~GadiN~~d~~G--~TpLh~  115 (489)
T PHA02798         44 LQRDSPSTDIVKLFINLGAN--VNGLDNEYSTPLCTILSNIKDYKHM--LDIVK--ILIENGADINKKNSDG--ETPLYC  115 (489)
T ss_pred             HhCCCCCHHHHHHHHHCCCC--CCCCCCCCCChHHHHHHhHHhHHhH--HHHHH--HHHHCCCCCCCCCCCc--CcHHHH
Confidence            34556788999999999999  777889999999999875     22  45544  7788899999999888  999987


Q ss_pred             H--------HHHHHHHHhCCCCCCCCccccccHHHHHHHhcc-cchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHH--
Q 001410          607 H--------LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQ-LKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKE--  675 (1082)
Q Consensus       607 ~--------~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~-l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~--  675 (1082)
                      .        .+++++|+..|++.+..+..|.||+|+++..+. ...++++.|++.|++++..+... ..++++.++..  
T Consensus       116 a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~-~~t~Lh~~~~~~~  194 (489)
T PHA02798        116 LLSNGYINNLEILLFMIENGADTTLLDKDGFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKE-KYDTLHCYFKYNI  194 (489)
T ss_pred             HHHcCCcChHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcC-CCcHHHHHHHhcc
Confidence            3        588999999999999999999999999999875 10388999999999988764221 22344444332  


Q ss_pred             -hcHHHHHHHHHHCCCCCCccCCCCCcHHH-------HHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHH
Q 001410          676 -KLYSWLLRKVCEDGKGPCILDDEGQGVLH-------LAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT  747 (1082)
Q Consensus       676 -~~~~~lv~~Lle~Gad~n~~d~~G~TpLH-------lAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~i  747 (1082)
                       .....++++|++.|++++..+..|.|+++       ++...+...++.+|+. |+|+|.+|..|+||||+||..|+.++
T Consensus       195 ~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A~~~~~~~~  273 (489)
T PHA02798        195 DRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSVSHNNRKI  273 (489)
T ss_pred             ccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHHHHcCcHHH
Confidence             34678899999999999999999999887       2344567788888765 69999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCc
Q 001410          748 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTS  797 (1082)
Q Consensus       748 V~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~  797 (1082)
                      +++||++||+++.+      |..|.||||+|+.+|+.++++.|++.+++.
T Consensus       274 v~~LL~~GAdin~~------d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~  317 (489)
T PHA02798        274 FEYLLQLGGDINII------TELGNTCLFTAFENESKFIFNSILNKKPNK  317 (489)
T ss_pred             HHHHHHcCCccccc------CCCCCcHHHHHHHcCcHHHHHHHHccCCCH
Confidence            99999999999984      479999999999999999999999988663

>KOG0510 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.92  E-value=3.9e-25  Score=260.30  Aligned_cols=270  Identities=16%  Similarity=0.094  Sum_probs=223.6

Q ss_pred             cccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH-
Q 001410          528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-  606 (1082)
Q Consensus       528 ~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl-  606 (1082)
                      ++.|+|++.|..++...|++.|++  .+..+..|+||||+||..++  .+...  .++..++++--.|.+|  ..++|. 
T Consensus       123 aplh~A~~~~~~s~L~~Ll~~~~d--vnl~de~~~TpLh~A~~~~~--~E~~k--~Li~~~a~~~K~~~~~--~~~iH~a  194 (929)
T KOG0510|consen  123 APLHLAADSGNYSCLKLLLDYGAD--VNLEDENGFTPLHLAARKNK--VEAKK--ELINKGADPCKSDIDG--NFPIHEA  194 (929)
T ss_pred             CchhhccccchHHHHHHHHHhcCC--ccccccCCCchhhHHHhcCh--HHHHH--HHHhcCCCCCcccCcC--CchHHHH
Confidence            457799999999999999999988  77778899999999999988  66444  5667788887777777  667776 


Q ss_pred             ----HHHHHHHHHh-----CCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccC------------cCcch
Q 001410          607 ----HLRLERILSM-----RSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLS------------QHVEK  665 (1082)
Q Consensus       607 ----~~rlvkLLl~-----~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~------------~~~~~  665 (1082)
                          +.+..++.+.     .+...+..++.+.+|||.|...+.+  +.++.+++.+..+...-            ..+..
T Consensus       195 a~s~s~e~mEi~l~~~g~~r~~~in~~~n~~~~pLhlAve~g~~--e~lk~~L~n~~~~a~~~~~~~~q~kelv~~~d~d  272 (929)
T KOG0510|consen  195 ARSGSKECMEIFLPEHGYERQTHINFDNNEKATPLHLAVEGGDI--EMLKMCLQNGKKIADVQLDAMQQEKELVNDEDND  272 (929)
T ss_pred             HHhcchhhhhhhhccccchhhcccccccCCCCcchhhhhhcCCH--HHHHHHHhCccccchhhhHHHHHHHHHhhccccc
Confidence                4566666665     4467788889999999999999995  77777776655433321            01123


Q ss_pred             hHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHh-CC-CCccccCCCCCCHHHHHHHcC
Q 001410          666 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT-AG-VSINFRDLSGWTALHWAAYCG  743 (1082)
Q Consensus       666 ~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~-~G-advn~~D~~G~TpLH~Aa~~G  743 (1082)
                      +.+++|.+...|....+..|+..|++++.+++++.||||.||..|+..+|+-||+ .| ..+|..|..|.||||+|+..|
T Consensus       273 g~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~g  352 (929)
T KOG0510|consen  273 GCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSG  352 (929)
T ss_pred             CCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcC
Confidence            4577777777888888999999999999999999999999999999999999998 55 467999999999999999999


Q ss_pred             CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHH
Q 001410          744 REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALED  815 (1082)
Q Consensus       744 ~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~  815 (1082)
                      |.+++++||.+||......   ..|.+|.||||+|+..|+..+|++|+.+|++     ++.++..|.+|+++
T Consensus       353 H~~v~qlLl~~GA~~~~~~---e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~-----I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  353 HDRVVQLLLNKGALFLNMS---EADSDGNTALHLAAKYGNTSAVQKLISHGAD-----IGVKNKKGKSAFDT  416 (929)
T ss_pred             HHHHHHHHHhcChhhhccc---ccccCCchhhhHHHHhccHHHHHHHHHcCCc-----eeeccccccccccc
Confidence            9999999999999987422   1478999999999999999999999998855     88888888888773

>KOG4412 consensus 26S proteasome regulatory complex, subunit PSMD10 [Posttranslational modification, protein turnover, chaperones]

Probab=99.92  E-value=2.1e-25  Score=223.08  Aligned_cols=187  Identities=20%  Similarity=0.161  Sum_probs=154.7

Q ss_pred             HHHHHHhcccchHHHHHHHhhcC-CCCccCcCcchhHHHHHHHHHhcHHHHHHHHH-HCCCCCCccCCCCCcHHHHHHHc
Q 001410          632 QKLISKIIQLKEEEESYQMVEAN-PEKNLSQHVEKYQILQKIMKEKLYSWLLRKVC-EDGKGPCILDDEGQGVLHLAASL  709 (1082)
Q Consensus       632 lh~A~~~~~l~~e~~~~Ll~~ga-~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Ll-e~Gad~n~~d~~G~TpLHlAa~~  709 (1082)
                      .+.++....  ...++.+++... ..+..+.  ..+.+++|++..-++..++++|+ +.+..+|.+|..||||||.||..
T Consensus         7 ~~~~~~~~~--~~kveel~~s~~kSL~~r~d--qD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaGWtPlhia~s~   82 (226)
T KOG4412|consen    7 GKAICENCE--EFKVEELIQSDPKSLNARDD--QDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAGWTPLHIAASN   82 (226)
T ss_pred             HHHHHhhch--HHHHHHHHhcChhhhhcccc--ccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccCCchhhhhhhc
Confidence            334444443  245566664333 3333332  23468888888899999999999 67889999999999999999999


Q ss_pred             CCHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Q 001410          710 GYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISG  788 (1082)
Q Consensus       710 G~~~iv~~LL~~-Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~  788 (1082)
                      |+.++|+.|+.+ |+|+|..++.|.|+|||||..|+.+|+.+|++.|+.+++      +|..|.||||-|+..|...+++
T Consensus        83 g~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~------kD~~~qtplHRAAavGklkvie  156 (226)
T KOG4412|consen   83 GNDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRI------KDKQGQTPLHRAAAVGKLKVIE  156 (226)
T ss_pred             CcHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcc------cccccCchhHHHHhccchhhHH
Confidence            999999999998 999999999999999999999999999999999999998      6789999999999999999999


Q ss_pred             HHHHcCCCcccccCccCCCCCCcHHHHHH----HHHHHHHHHhcCCCCC
Q 001410          789 FLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPAN  833 (1082)
Q Consensus       789 ~LLe~Ga~~~~adln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~a  833 (1082)
                      +|+..|+     .+|..|+.|.||||.+-    .....+|++.+++...
T Consensus       157 ~Li~~~a-----~~n~qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~  200 (226)
T KOG4412|consen  157 YLISQGA-----PLNTQDKYGFTPLHHALAEGHPDVAVLLVRAGADTDR  200 (226)
T ss_pred             HHHhcCC-----CCCcccccCccHHHHHHhccCchHHHHHHHhccceee
Confidence            9999984     49999999999999984    3445566777765543

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.92  E-value=3.8e-25  Score=257.17  Aligned_cols=207  Identities=21%  Similarity=0.242  Sum_probs=177.8

Q ss_pred             cchhhccCCcHHHHHHHHC-CCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHHH
Q 001410          530 CKWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHL  608 (1082)
Q Consensus       530 ~~~ac~fG~veVv~~LLq~-Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~~  608 (1082)
                      ...||..|+++.++++++. |..  .+.++..|.|+||+|+.|+.  .                                
T Consensus        48 ~v~A~q~G~l~~v~~lve~~g~~--v~~~D~~g~tlLHWAAiNNr--l--------------------------------   91 (600)
T KOG0509|consen   48 IVKATQYGELETVKELVESEGES--VNNPDREGVTLLHWAAINNR--L--------------------------------   91 (600)
T ss_pred             hhhHhhcchHHHHHHHHhhcCcC--CCCCCcCCccceeHHHHcCc--H--------------------------------
Confidence            3478999999999999998 766  77788888889998887766  2                                


Q ss_pred             HHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHC
Q 001410          609 RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED  688 (1082)
Q Consensus       609 rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~  688 (1082)
                                                         +++++|+++|+++|...  +..+.+++|+|..+++..++.+|+++
T Consensus        92 -----------------------------------~v~r~li~~gadvn~~g--G~l~stPLHWAar~G~~~vv~lLlqh  134 (600)
T KOG0509|consen   92 -----------------------------------DVARYLISHGADVNAIG--GVLGSTPLHWAARNGHISVVDLLLQH  134 (600)
T ss_pred             -----------------------------------HHHHHHHHcCCCccccC--CCCCCCcchHHHHcCcHHHHHHHHHc
Confidence                                               44555666666666553  24456677777777777889999999


Q ss_pred             CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCC
Q 001410          689 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEF  768 (1082)
Q Consensus       689 Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D  768 (1082)
                      ||+|+.+|.+|.||||+||..|+.-+|.+||.+|+++|.+|.+|+|||||||..|+...+..||..|+.++..++     
T Consensus       135 GAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~-----  209 (600)
T KOG0509|consen  135 GADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGASLLLTDD-----  209 (600)
T ss_pred             CCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccccccccc-----
Confidence            999999999999999999999999999999999999999999999999999999999989999999999998653     


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHH
Q 001410          769 PLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAK  819 (1082)
Q Consensus       769 ~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~  819 (1082)
                      ..|.||||+|+..|+..++.+|++.|+     +.+..|.+|.||+.+|...
T Consensus       210 ~~g~TpLHwa~~~gN~~~v~Ll~~g~~-----~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  210 NHGNTPLHWAVVGGNLTAVKLLLEGGA-----DLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ccCCchHHHHHhcCCcceEehhhhcCC-----cccccccCCCCHHHHHHHh
Confidence            899999999999999999997777664     4788888899999998755

>PHA02730 ankyrin-like protein; Provisional

Probab=99.92  E-value=7e-24  Score=255.89  Aligned_cols=283  Identities=13%  Similarity=-0.002  Sum_probs=208.3

Q ss_pred             cchhhc--cCCcHHHHHHHHCC-CCcccCCC---CCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcc-------cCC
Q 001410          530 CKWSCM--FAEVEVPAEVLADG-VLCCRIPP---HAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADI-------SDI  596 (1082)
Q Consensus       530 ~~~ac~--fG~veVv~~LLq~G-v~~C~~p~---~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~-------~d~  596 (1082)
                      +..+|.  .|++++++.|+..| .+.-.+..   +..|.+|+|+|..+++  .+|++  +++..|++++.       .+.
T Consensus       118 l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~--~eIvk--lLi~~g~~v~g~~~~~~~~~~  193 (672)
T PHA02730        118 LYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPR--PEVLL--WLLKSECYSTGYVFRSCMYDS  193 (672)
T ss_pred             HHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCc--hHHHH--HHHHcCCcccccccccccccC
Confidence            345555  78888888888644 44222211   2368899999998888  77766  66777787752       122


Q ss_pred             CCCCcchhHH-----------HHHHHHHHHhCCCCCCCCccccccHHHHHHHh--cccchHHHHHHHh------------
Q 001410          597 YGSSTSESFL-----------HLRLERILSMRSSPQNHLSEGLCEKQKLISKI--IQLKEEEESYQMV------------  651 (1082)
Q Consensus       597 ~g~~~t~Lhl-----------~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~--~~l~~e~~~~Ll~------------  651 (1082)
                      .. ..+.||+           ..+++++|++.|++.+..+..|.||||++...  ++  .++++.|++            
T Consensus       194 ~~-c~~~l~~~il~~~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~--~eiv~~Li~~~~~~~~~~~~~  270 (672)
T PHA02730        194 DR-CKNSLHYYILSHRESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTID--IEIVKLLIKDVDTCSVYDDIS  270 (672)
T ss_pred             Cc-cchhHHHHHHhhhhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCccc--HHHHHHHHhcccccccccccc
Confidence            22 3455553           46888999999988888888999999863332  33  377788886            


Q ss_pred             --------------------hcCCCCc--------------------cCcCcc-------------------hhHHHHHH
Q 001410          652 --------------------EANPEKN--------------------LSQHVE-------------------KYQILQKI  672 (1082)
Q Consensus       652 --------------------~ga~~n~--------------------~~~~~~-------------------~~~~l~~~  672 (1082)
                                          +|++...                    .+..+.                   ...+++..
T Consensus       271 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~i~~~~~~~~~~~~q~~l~~Y  350 (672)
T PHA02730        271 QPYIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRSITSYDSREYNHYIIDNILKRFRQQDESIVQAMLINY  350 (672)
T ss_pred             chhhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhccccccccccchhHHHHHHHhhhccchhHHHHHHHHH
Confidence                                4554422                    111111                   11244555


Q ss_pred             HHHh--cHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC----HHHHHHHHhCCC--CccccCCCCCCHHHH---HHH
Q 001410          673 MKEK--LYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGV--SINFRDLSGWTALHW---AAY  741 (1082)
Q Consensus       673 a~~~--~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~----~~iv~~LL~~Ga--dvn~~D~~G~TpLH~---Aa~  741 (1082)
                      ....  ....++++|+++||++|.. ..|.||||+|+..++    .+++++||++|+  ++|.+|..|.||||.   |+.
T Consensus       351 ~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd~~G~T~Lh~~i~a~~  429 (672)
T PHA02730        351 LHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVSNNGRLCMYGLILSRF  429 (672)
T ss_pred             HhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccccCCCchHhHHHHHHh
Confidence            5544  5788999999999999985 799999999998875    899999999998  699999999999994   333


Q ss_pred             cC---------CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCC-CCCc
Q 001410          742 CG---------REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDS-ADDG  811 (1082)
Q Consensus       742 ~G---------~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~-~g~t  811 (1082)
                      .+         ..+++++|+.+||++|+      +|..|.||||+|+..++.+++++|+++|++     ++.++. .|.|
T Consensus       430 ~n~~~~~~e~~~~~ivk~LIs~GADINa------kD~~G~TPLh~Aa~~~~~eive~LI~~GAd-----IN~~d~~~g~T  498 (672)
T PHA02730        430 NNCGYHCYETILIDVFDILSKYMDDIDM------IDNENKTLLYYAVDVNNIQFARRLLEYGAS-----VNTTSRSIINT  498 (672)
T ss_pred             ccccccccchhHHHHHHHHHhcccchhc------cCCCCCCHHHHHHHhCCHHHHHHHHHCCCC-----CCCCCCcCCcC
Confidence            32         23579999999999998      567999999999999999999999999954     888886 5899


Q ss_pred             HHHHHHH------HHHHHHHHhcCCC
Q 001410          812 ALEDSIA------KAVQTVSEKTATP  831 (1082)
Q Consensus       812 al~~a~~------~~v~~Lle~~a~~  831 (1082)
                      |+|.++.      ..++.|++.++..
T Consensus       499 aL~~Aa~~~~~~~eIv~~LLs~ga~i  524 (672)
T PHA02730        499 AIQKSSYRRENKTKLVDLLLSYHPTL  524 (672)
T ss_pred             HHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence            9999864      3777777777643

>PHA02875 ankyrin repeat protein; Provisional

Probab=99.92  E-value=1.6e-23  Score=245.84  Aligned_cols=209  Identities=19%  Similarity=0.102  Sum_probs=173.2

Q ss_pred             HHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHC
Q 001410          609 RLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCED  688 (1082)
Q Consensus       609 rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~  688 (1082)
                      +++++|+..|++.+.....|.+|||+|+..++  .+.+++|++.|++.+..+..+   .++++.+...+...+++.|++.
T Consensus        16 ~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~--~~~v~~Ll~~ga~~~~~~~~~---~t~L~~A~~~g~~~~v~~Ll~~   90 (413)
T PHA02875         16 DIARRLLDIGINPNFEIYDGISPIKLAMKFRD--SEAIKLLMKHGAIPDVKYPDI---ESELHDAVEEGDVKAVEELLDL   90 (413)
T ss_pred             HHHHHHHHCCCCCCccCCCCCCHHHHHHHcCC--HHHHHHHHhCCCCccccCCCc---ccHHHHHHHCCCHHHHHHHHHc
Confidence            33444444444444445566899999999998  499999999998876654322   3566667777888889999999


Q ss_pred             CCCCC-ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 001410          689 GKGPC-ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE  767 (1082)
Q Consensus       689 Gad~n-~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~  767 (1082)
                      |+.++ ..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.      +
T Consensus        91 ~~~~~~~~~~~g~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~------~  164 (413)
T PHA02875         91 GKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI------E  164 (413)
T ss_pred             CCcccccccCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC------C
Confidence            98764 4577899999999999999999999999999999999999999999999999999999999999988      5


Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCC-cHHHHHH----HHHHHHHHHhcCCCCC
Q 001410          768 FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADD-GALEDSI----AKAVQTVSEKTATPAN  833 (1082)
Q Consensus       768 D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~-tal~~a~----~~~v~~Lle~~a~~~a  833 (1082)
                      |..|.||||+|+..|+.+++++|++.|++     ++..+..|. ||++.|.    .+.++.|++.|++++.
T Consensus       165 d~~g~TpL~~A~~~g~~eiv~~Ll~~ga~-----~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~  230 (413)
T PHA02875        165 DCCGCTPLIIAMAKGDIAICKMLLDSGAN-----IDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNI  230 (413)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----CCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcch
Confidence            67999999999999999999999999965     666776664 6777665    5778888888887764

>KOG4177 consensus Ankyrin [Cell wall/membrane/envelope biogenesis]

Probab=99.92  E-value=5.8e-25  Score=273.69  Aligned_cols=315  Identities=18%  Similarity=0.179  Sum_probs=262.9

Q ss_pred             ccccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH
Q 001410          527 VAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL  606 (1082)
Q Consensus       527 ~~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl  606 (1082)
                      .+..++++.+|+.++...+...+..  ....+..|.+|+|+||..+.  .++++  ++...++++|.....|  .|++|+
T Consensus       342 ~t~lHlaa~~~~~~~~~~l~~~~~~--~~~a~~k~~~pl~la~~~g~--~~~v~--Lll~~ga~~~~~gk~g--vTplh~  413 (1143)
T KOG4177|consen  342 YTPLHLAAKEGQVEVAGALLEHGAQ--RRQAEEKGFTPLHLAVKSGR--VSVVE--LLLEAGADPNSAGKNG--VTPLHV  413 (1143)
T ss_pred             cccccHhhhhhhHHHHHHhhccccc--cCcccccCCcchhhhcccCc--hhHHH--hhhhccCCcccCCCCC--cceeee
Confidence            3557899999999988877776665  66678999999999999888  66766  6677778888777777  999999


Q ss_pred             -----HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHH
Q 001410          607 -----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL  681 (1082)
Q Consensus       607 -----~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~l  681 (1082)
                           ..+++++++..++..+.....|.|++|+++..+.. .+....++..+.+.+.....   +.++++.+...++..+
T Consensus       414 aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~-~~~~~~l~~~g~~~n~~s~~---G~T~Lhlaaq~Gh~~~  489 (1143)
T KOG4177|consen  414 AAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRY-LQIARLLLQYGADPNAVSKQ---GFTPLHLAAQEGHTEV  489 (1143)
T ss_pred             hhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccH-hhhhhhHhhcCCCcchhccc---cCcchhhhhccCCchH
Confidence                 56888999999989999999999999999999843 47777777889999988844   4588889999999999


Q ss_pred             HHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 001410          682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL  761 (1082)
Q Consensus       682 v~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~  761 (1082)
                      +..|++.++..+...+.|-|+||+|+..++..+++.++++|++++.++..|.||||.||.+|+.++|++||++||++++ 
T Consensus       490 ~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~a-  568 (1143)
T KOG4177|consen  490 VQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNA-  568 (1143)
T ss_pred             HHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccc-
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999999999 


Q ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHH----HHHHHhcCCCCCCCCc
Q 001410          762 TDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAV----QTVSEKTATPANDNDE  837 (1082)
Q Consensus       762 ~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v----~~Lle~~a~~~a~~~~  837 (1082)
                           +|+.|+||||.||..|+.+|+.+|+++|+.     +|..+..|.||++++...+.    +.+...++.+.+   .
T Consensus       569 -----k~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~-----vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~~~~---~  635 (1143)
T KOG4177|consen  569 -----KDKLGYTPLHQAAQQGHNDIAELLLKHGAS-----VNAADLDGFTPLHIAVRLGYLSVVKLLKVVTATPAA---T  635 (1143)
T ss_pred             -----cCCCCCChhhHHHHcChHHHHHHHHHcCCC-----CCcccccCcchhHHHHHhcccchhhHHHhccCcccc---c
Confidence                 557999999999999999999999999955     88899999999999886554    444444444311   1


Q ss_pred             ccccccccchhhhhhhhhhhHHHHHHHhhh
Q 001410          838 SDVLSLKDSLTAICNATQAADRIHQIFRMQ  867 (1082)
Q Consensus       838 e~~~~lkdsltav~~AaqaaarIq~afR~~  867 (1082)
                      .....-..+.++...+......++..++..
T Consensus       636 ~~~~e~~~g~~p~~v~e~~~~~~~~~i~~~  665 (1143)
T KOG4177|consen  636 DPVKENRKGAVPEDVAEELDTDRQDLIRGK  665 (1143)
T ss_pred             cchhhhhcccChhhHHHHhhhhhhhhhccc
Confidence            234445566677776666666666555544

>PHA02798 ankyrin-like protein; Provisional

Probab=99.91  E-value=2.6e-23  Score=249.73  Aligned_cols=269  Identities=10%  Similarity=-0.005  Sum_probs=214.5

Q ss_pred             cHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH----------HH
Q 001410          539 VEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL----------HL  608 (1082)
Q Consensus       539 veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl----------~~  608 (1082)
                      +++|+.|+..+....    ...|.|+++.+........++++  +++..|+++|..|..|  .||||.          +.
T Consensus        18 ~~~v~~ll~~~~~~~----~~~~~~~~~~yl~~~~~~~~iv~--~Ll~~Gadvn~~d~~g--~TpL~~~~~n~~~~~~~~   89 (489)
T PHA02798         18 LSTVKLLIKSCNPNE----IVNEYSIFQKYLQRDSPSTDIVK--LFINLGANVNGLDNEY--STPLCTILSNIKDYKHML   89 (489)
T ss_pred             HHHHHHHHhcCChhh----hcccchHHHHHHhCCCCCHHHHH--HHHHCCCCCCCCCCCC--CChHHHHHHhHHhHHhHH
Confidence            479999998654422    24577888766554442255555  7888999999998887  888876          26


Q ss_pred             HHHHHHHhCCCCCCCCccccccHHHHHHHhccc-chHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcH---HHHHHH
Q 001410          609 RLERILSMRSSPQNHLSEGLCEKQKLISKIIQL-KEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLY---SWLLRK  684 (1082)
Q Consensus       609 rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l-~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~---~~lv~~  684 (1082)
                      +++++|+..|++.+..+..|.||||+|+..+.. -.+.+++|++.|++++..+..+.   ++++.+...+.   ..++++
T Consensus        90 ~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~---tpL~~a~~~~~~~~~~vv~~  166 (489)
T PHA02798         90 DIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGF---TMLQVYLQSNHHIDIEIIKL  166 (489)
T ss_pred             HHHHHHHHCCCCCCCCCCCcCcHHHHHHHcCCcChHHHHHHHHHcCCCccccCCCCC---cHHHHHHHcCCcchHHHHHH
Confidence            899999999999999999999999999986521 04899999999999998875443   45555444444   789999


Q ss_pred             HHHCCCCCCccC-CCCCcHHHHHHHc----CCHHHHHHHHhCCCCccccCCCCCCHHH-------HHHHcCCHHHHHHHH
Q 001410          685 VCEDGKGPCILD-DEGQGVLHLAASL----GYDWAIKPTVTAGVSINFRDLSGWTALH-------WAAYCGREKTVAVLL  752 (1082)
Q Consensus       685 Lle~Gad~n~~d-~~G~TpLHlAa~~----G~~~iv~~LL~~Gadvn~~D~~G~TpLH-------~Aa~~G~~~iV~~LL  752 (1082)
                      |++.|++++..+ ..|.||||.++..    ++.+++++|+++|++++..|..|.|+++       ++...++.+++.+|+
T Consensus       167 Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~  246 (489)
T PHA02798        167 LLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIF  246 (489)
T ss_pred             HHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHH
Confidence            999999999885 5799999998764    4789999999999999999999999987       345567788888877


Q ss_pred             HcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHH----HHHHHHhc
Q 001410          753 SLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA----VQTVSEKT  828 (1082)
Q Consensus       753 ~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~----v~~Lle~~  828 (1082)
                      . |+++|.      +|..|.||||+|+..|+.+++++|++.|++     ++..+..|.||++.|....    +..|++.+
T Consensus       247 ~-~~dvN~------~d~~G~TPL~~A~~~~~~~~v~~LL~~GAd-----in~~d~~G~TpL~~A~~~~~~~iv~~lL~~~  314 (489)
T PHA02798        247 S-YIDINQ------VDELGFNPLYYSVSHNNRKIFEYLLQLGGD-----INIITELGNTCLFTAFENESKFIFNSILNKK  314 (489)
T ss_pred             h-cCCCCC------cCcCCccHHHHHHHcCcHHHHHHHHHcCCc-----ccccCCCCCcHHHHHHHcCcHHHHHHHHccC
Confidence            6 688888      567999999999999999999999999954     8899999999999998644    44555544


Q ss_pred             CC
Q 001410          829 AT  830 (1082)
Q Consensus       829 a~  830 (1082)
                      ++
T Consensus       315 ~~  316 (489)
T PHA02798        315 PN  316 (489)
T ss_pred             CC
Confidence            43

>PHA02878 ankyrin repeat protein; Provisional

Probab=99.91  E-value=5.4e-24  Score=254.75  Aligned_cols=237  Identities=16%  Similarity=0.040  Sum_probs=161.7

Q ss_pred             cccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHH
Q 001410          528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH  607 (1082)
Q Consensus       528 ~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~  607 (1082)
                      +++++||..|+.+++..|++.+...  .  ...+.+||+.|+..++  .+++.+.  +..+.+.... .+.     ..+ 
T Consensus        72 TpLh~A~~~g~~~~v~~Ll~~~~~~--~--~~~~~~~l~~a~~~~~--~ei~~~L--l~~~~~~~~~-~~~-----~~~-  136 (477)
T PHA02878         72 TPLHIICKEPNKLGMKEMIRSINKC--S--VFYTLVAIKDAFNNRN--VEIFKII--LTNRYKNIQT-IDL-----VYI-  136 (477)
T ss_pred             CHHHHHHHCccHhHHHHHHHHHhcc--c--cccchhhHHHHHHcCC--HHHHHHH--HhCcccCccc-CcH-----HHH-
Confidence            3477999999999999999987651  1  2567899999999988  6776533  3322111100 000     000 


Q ss_pred             HHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHH
Q 001410          608 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE  687 (1082)
Q Consensus       608 ~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle  687 (1082)
                             .                  ........-.+.++.|++.|++++..+..  .+.++++.+...+...++++|++
T Consensus       137 -------~------------------~~~~~~~~~~~iv~~Ll~~gadin~~~~~--~g~tpLh~A~~~~~~~iv~~Ll~  189 (477)
T PHA02878        137 -------D------------------KKSKDDIIEAEITKLLLSYGADINMKDRH--KGNTALHYATENKDQRLTELLLS  189 (477)
T ss_pred             -------h------------------hccchhhHHHHHHHHHHHcCCCCCccCCC--CCCCHHHHHHhCCCHHHHHHHHH
Confidence                   0                  00000000023556666666666655432  12345555555566667778888


Q ss_pred             CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHc-CCHHHHHHHHHcCCCCCCCCCCCC
Q 001410          688 DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC-GREKTVAVLLSLGAAPGLLTDPSP  766 (1082)
Q Consensus       688 ~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~-G~~~iV~~LL~~GAd~n~~~d~~~  766 (1082)
                      .|+++|.+|..|.||||+|+..|+.+++++|++.|++++.+|..|+||||+|+.. ++.+++++|+++|++++..++   
T Consensus       190 ~gad~n~~d~~g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~---  266 (477)
T PHA02878        190 YGANVNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSY---  266 (477)
T ss_pred             CCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCC---
Confidence            8888888888888888888888888888888888888888888888888888865 678888888888888877431   


Q ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHH
Q 001410          767 EFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA  818 (1082)
Q Consensus       767 ~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~  818 (1082)
                        ..|.||||+|  .++.+++++|++.|++     ++..|..|.||++.|..
T Consensus       267 --~~g~TpLh~A--~~~~~~v~~Ll~~gad-----in~~d~~g~TpL~~A~~  309 (477)
T PHA02878        267 --ILGLTALHSS--IKSERKLKLLLEYGAD-----INSLNSYKLTPLSSAVK  309 (477)
T ss_pred             --CCCCCHHHHH--ccCHHHHHHHHHCCCC-----CCCcCCCCCCHHHHHHH
Confidence              3688888888  4677888888888744     77788888888888764

>PHA02917 ankyrin-like protein; Provisional

Probab=99.91  E-value=4.1e-23  Score=254.32  Aligned_cols=280  Identities=11%  Similarity=-0.011  Sum_probs=183.1

Q ss_pred             chhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHH--hcCCcccceeeeeeccCCCCCCcccCCCC-C--------
Q 001410          531 KWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITC--SNRLACSEVREFDYIVGSVKDADISDIYG-S--------  599 (1082)
Q Consensus       531 ~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~--~~g~~csevv~feyl~~~~a~vn~~d~~g-~--------  599 (1082)
                      .+|+..|++++++.|++.|++  .+..+..|+||||+|+  .+++  .+|++  +++.+|++++..|..+ .        
T Consensus       108 ~~a~~~~~~e~vk~Ll~~Gad--in~~d~~g~T~L~~~~a~~~~~--~eivk--lLi~~Ga~vn~~d~~~~~g~~~~~~~  181 (661)
T PHA02917        108 YMKSKNVDVDLIKVLVEHGFD--LSVKCENHRSVIENYVMTDDPV--PEIID--LFIENGCSVLYEDEDDEYGYAYDDYQ  181 (661)
T ss_pred             HHHhhcCCHHHHHHHHHcCCC--CCccCCCCccHHHHHHHccCCC--HHHHH--HHHHcCCCcccccccccccccccccc
Confidence            356666666666666666666  5555666666666433  3444  55544  5555666665543321 0        


Q ss_pred             ---CcchhHHH----------------HHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccC
Q 001410          600 ---STSESFLH----------------LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLS  660 (1082)
Q Consensus       600 ---~~t~Lhl~----------------~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~  660 (1082)
                         ..|+||+.                .+++++|+..|++.+..+..|.||||+|+..++.-.++++.|+ +|++.+...
T Consensus       182 ~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk~Li-~g~d~~~~~  260 (661)
T PHA02917        182 PRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVKLLM-KGIDNTAYS  260 (661)
T ss_pred             ccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHHHHH-hCCcccccc
Confidence               13666552                2466666666666666666666666666666653014555554 344332100


Q ss_pred             ---------------------------------------------------cCcchhHH-----------HHH----HHH
Q 001410          661 ---------------------------------------------------QHVEKYQI-----------LQK----IMK  674 (1082)
Q Consensus       661 ---------------------------------------------------~~~~~~~~-----------l~~----~a~  674 (1082)
                                                                         ..+..+..           +++    ++.
T Consensus       261 ~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  340 (661)
T PHA02917        261 YIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPHGIMCSIVPLWRNDKETISLILKTMNSDVLQHILIEYMT  340 (661)
T ss_pred             cccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCCceeEeeecccccchHHHHHHHHHhchHHHHHHHHHHHH
Confidence                                                               00000001           100    111


Q ss_pred             Hhc-HHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHh-CCCCccccCCCCCCHHHHHHHcC---------
Q 001410          675 EKL-YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT-AGVSINFRDLSGWTALHWAAYCG---------  743 (1082)
Q Consensus       675 ~~~-~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~-~Gadvn~~D~~G~TpLH~Aa~~G---------  743 (1082)
                      .+. ...++++|++.|+++|.++..|.|+.    .....++++.||. .|++++..+.+|+||||.||..+         
T Consensus       341 ~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~G~TpL~~a~~~~~~~~~~~~~  416 (661)
T PHA02917        341 FGDIDIPLVECMLEYGAVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDDGEIPIGHLCKSNYGCYNFYTY  416 (661)
T ss_pred             cCCCcHHHHHHHHHcCCCCCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCCCCChhHHHHHhcccchhhhhh
Confidence            111 24478888889999988888888754    3556677777776 68888777888999999997432         


Q ss_pred             --------------CHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCC
Q 001410          744 --------------REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD  809 (1082)
Q Consensus       744 --------------~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g  809 (1082)
                                    ..+++++|+.+||++|.      +|..|.||||+|+..++.+++++|++.|+     +++.++..|
T Consensus       417 ~~~~~~~~~~~~~~~~~~v~~Ll~~GAdIN~------kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GA-----din~~d~~G  485 (661)
T PHA02917        417 TYKKGLCDMSYACPILSTINICLPYLKDINM------IDKRGETLLHKAVRYNKQSLVSLLLESGS-----DVNIRSNNG  485 (661)
T ss_pred             hhhhccchhhhhhhhHHHHHHHHHCCCCCCC------CCCCCcCHHHHHHHcCCHHHHHHHHHCcC-----CCCCCCCCC
Confidence                          35678999999999998      56799999999999999999999999995     488999999


Q ss_pred             CcHHHHHHH-----HHHHHHHHhcCCCC
Q 001410          810 DGALEDSIA-----KAVQTVSEKTATPA  832 (1082)
Q Consensus       810 ~tal~~a~~-----~~v~~Lle~~a~~~  832 (1082)
                      .||++++..     ..+..|+..++...
T Consensus       486 ~T~L~~A~~~~~~~~iv~~LL~~ga~i~  513 (661)
T PHA02917        486 YTCIAIAINESRNIELLKMLLCHKPTLD  513 (661)
T ss_pred             CCHHHHHHHhCCCHHHHHHHHHcCCChh
Confidence            999999873     55666776665443

>PHA02792 ankyrin-like protein; Provisional

Probab=99.88  E-value=1.4e-21  Score=233.82  Aligned_cols=265  Identities=7%  Similarity=-0.032  Sum_probs=196.0

Q ss_pred             hhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHh-cCCcccceeeeeeccCCCCCCc------------------
Q 001410          532 WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCS-NRLACSEVREFDYIVGSVKDAD------------------  592 (1082)
Q Consensus       532 ~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~-~g~~csevv~feyl~~~~a~vn------------------  592 (1082)
                      +|+..|++|++++|+.+|++  .+.++..|.||||+|.. +++  .+|++  +++..|++++                  
T Consensus        78 ~~s~n~~lElvk~LI~~GAd--vN~~~n~~~~~l~ya~~~~~~--~eivk--~Ll~~Gad~~~~~~~g~~~~~~~~~~~~  151 (631)
T PHA02792         78 LCSDNIDIELLKLLISKGLE--INSIKNGINIVEKYATTSNPN--VDVFK--LLLDKGIPTCSNIQYGYKIIIEQITRAE  151 (631)
T ss_pred             HHHhcccHHHHHHHHHcCCC--cccccCCCCcceeEeecCCCC--hHHHH--HHHHCCCCcccccccCcchhhhhccccc
Confidence            56777888888888888887  55566667788777754 455  67765  4555565432                  


Q ss_pred             ------------------ccCCCCCCcchhHH----H--------HHHHHHHHhCCCCCCCCccccccHHHHHHHhcccc
Q 001410          593 ------------------ISDIYGSSTSESFL----H--------LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLK  642 (1082)
Q Consensus       593 ------------------~~d~~g~~~t~Lhl----~--------~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~  642 (1082)
                                        ..|..  +.|+||+    +        .+++++|+..|+..+..+..|.+|||++.....+-
T Consensus       152 ~~~~~~~~~~~~~~~~i~~~~~~--g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~  229 (631)
T PHA02792        152 YYNWDDELDDYDYDYTTDYDDRM--GKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIK  229 (631)
T ss_pred             ccchhhhccccccccccccCCCC--CCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccch
Confidence                              23333  4889988    4        68999999999888888889999999999988332


Q ss_pred             hHHHHHHHhhcCCCC--------------------ccCc---------Cc--------------------------chhH
Q 001410          643 EEEESYQMVEANPEK--------------------NLSQ---------HV--------------------------EKYQ  667 (1082)
Q Consensus       643 ~e~~~~Ll~~ga~~n--------------------~~~~---------~~--------------------------~~~~  667 (1082)
                      .++++.|+. .....                    ..+.         .+                          ....
T Consensus       230 ~ei~~~L~~-~~~~~~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~  308 (631)
T PHA02792        230 REIFDALFD-SNYSGNELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQD  308 (631)
T ss_pred             HHHHHHHHh-ccccccchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHH
Confidence            466666652 22100                    0000         00                          0111


Q ss_pred             HHHHHHHHh-cHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCC--CCHHHHHHHcCC
Q 001410          668 ILQKIMKEK-LYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSG--WTALHWAAYCGR  744 (1082)
Q Consensus       668 ~l~~~a~~~-~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G--~TpLH~Aa~~G~  744 (1082)
                      .++...... .+..++++|++.|++++ + ..+..++|.||..|+.++|++|+++||+++.+|..|  .||||+|+....
T Consensus       309 ~l~~Yl~~~~v~ieiIK~LId~Ga~~~-r-~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~  386 (631)
T PHA02792        309 LLSEYVSYHTVYINVIKCMIDEGATLY-R-FKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHE  386 (631)
T ss_pred             HHHHHHhcCCccHHHHHHHHHCCCccc-c-CCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhcc
Confidence            222222222 35678999999999875 2 235667999999999999999999999999999885  699999887766


Q ss_pred             HH---HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHH
Q 001410          745 EK---TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA  818 (1082)
Q Consensus       745 ~~---iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~  818 (1082)
                      .+   ++++|+++||++|.      +|..|.||||+|+..++.+++++|+++|+     +++.++..|.||+++|..
T Consensus       387 ~~v~~IlklLIs~GADIN~------kD~~G~TPLh~Aa~~~n~eivelLLs~GA-----DIN~kD~~G~TpL~~A~~  452 (631)
T PHA02792        387 SDVLSILKLCKPYIDDINK------IDKHGRSILYYCIESHSVSLVEWLIDNGA-----DINITTKYGSTCIGICVI  452 (631)
T ss_pred             HhHHHHHHHHHhcCCcccc------ccccCcchHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCCCCCHHHHHHH
Confidence            54   57889999999988      56799999999999999999999999985     488999999999999864

>KOG0509 consensus Ankyrin repeat and DHHC-type Zn-finger domain containing proteins [General function prediction only]

Probab=99.88  E-value=2.3e-22  Score=234.19  Aligned_cols=204  Identities=21%  Similarity=0.126  Sum_probs=172.6

Q ss_pred             ccHHHHHHHhcccchHHHHHHHhh-cCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccC-CCCCcHHHHH
Q 001410          629 CEKQKLISKIIQLKEEEESYQMVE-ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD-DEGQGVLHLA  706 (1082)
Q Consensus       629 ~t~lh~A~~~~~l~~e~~~~Ll~~-ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d-~~G~TpLHlA  706 (1082)
                      ..-...|++.+.+  +.++.|++. +.+++..+.   .+.+++|+++-++...++++|+++|+++|..+ .-|.||||+|
T Consensus        45 ~~~~v~A~q~G~l--~~v~~lve~~g~~v~~~D~---~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWA  119 (600)
T KOG0509|consen   45 LDDIVKATQYGEL--ETVKELVESEGESVNNPDR---EGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWA  119 (600)
T ss_pred             hhhhhhHhhcchH--HHHHHHHhhcCcCCCCCCc---CCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHH
Confidence            3445678888885  888889877 788887774   45688899999999999999999999999998 7799999999


Q ss_pred             HHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHH
Q 001410          707 ASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI  786 (1082)
Q Consensus       707 a~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~i  786 (1082)
                      |..|+..+|.+|+++|||++.+|..|.||||+||..|+.-+|.+||..|+++|.      +|.+|+||||+|+.+|+...
T Consensus       120 ar~G~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~------~D~~grTpLmwAaykg~~~~  193 (600)
T KOG0509|consen  120 ARNGHISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDL------RDNNGRTPLMWAAYKGFALF  193 (600)
T ss_pred             HHcCcHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCC------cCCCCCCHHHHHHHhcccHH
Confidence            999999999999999999999999999999999999999999999999999988      66899999999999999988


Q ss_pred             HHHHHHcCCCcccccCccCC-CCCCcHHHHHHHHH----HHHHHHhcCCCCCCCCcccccccccchhhhhhhhhh
Q 001410          787 SGFLAESSLTSLLLSLKMND-SADDGALEDSIAKA----VQTVSEKTATPANDNDESDVLSLKDSLTAICNATQA  856 (1082)
Q Consensus       787 v~~LLe~Ga~~~~adln~~d-~~g~tal~~a~~~~----v~~Lle~~a~~~a~~~~e~~~~lkdsltav~~Aaqa  856 (1082)
                      +..||..|+.     ++.+| +.|.||||.+...+    +..|++.++        +.+.....+.++...|.+.
T Consensus       194 v~~LL~f~a~-----~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~--------~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  194 VRRLLKFGAS-----LLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGA--------DLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             HHHHHHhccc-----ccccccccCCchHHHHHhcCCcceEehhhhcCC--------cccccccCCCCHHHHHHHh
Confidence            9999998854     77777 78999999988544    443333333        2334455577888777554

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.87  E-value=1.8e-22  Score=225.59  Aligned_cols=221  Identities=19%  Similarity=0.171  Sum_probs=180.8

Q ss_pred             hhccCCcHHHHHHHHCCC----CcccCCCCCCCChhHHHHHhcCCcccceeeeeeccC-CCCCCcccCCCCCCcchhHHH
Q 001410          533 SCMFAEVEVPAEVLADGV----LCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVG-SVKDADISDIYGSSTSESFLH  607 (1082)
Q Consensus       533 ac~fG~veVv~~LLq~Gv----~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~-~~a~vn~~d~~g~~~t~Lhl~  607 (1082)
                      |+.+|.+...+.|+-...    ..|. .....|.|||-+||.+||  .+|++  |++. -++++...   |  .      
T Consensus        11 aa~~g~l~~l~~ll~~~s~~ei~~l~-~~~~~g~tPL~iaaRnGH--~~vVe--yLle~~~a~~e~~---G--s------   74 (615)
T KOG0508|consen   11 AARDGKLQLLAKLLINSSNEEIISLI-GEVQNGGTPLLIAARNGH--ADVVE--YLLEHCRASPEQG---G--S------   74 (615)
T ss_pred             HhhhhhHHHHHHHHhCCchHHHHHHh-ccccCCCCceeeehhcCc--HHHHH--HHHHHhcCCccCC---c--e------
Confidence            567888877777765432    2222 235678899999999999  78876  5554 23333221   1  0      


Q ss_pred             HHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHH
Q 001410          608 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE  687 (1082)
Q Consensus       608 ~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle  687 (1082)
                                 .........|.+|+-.|+.-+++  ++++.|+++|+++|..+..+   .+++.++.-.++..++++|++
T Consensus        75 -----------V~FDge~IegappLWaAsaAGHl--~vVk~L~~~ga~VN~tT~TN---StPLraACfDG~leivKyLvE  138 (615)
T KOG0508|consen   75 -----------VRFDGETIEGAPPLWAASAAGHL--EVVKLLLRRGASVNDTTRTN---STPLRAACFDGHLEIVKYLVE  138 (615)
T ss_pred             -----------EEeCCcccCCCchhhHHhccCcH--HHHHHHHHhcCccccccccC---CccHHHHHhcchhHHHHHHHH
Confidence                       00111234577888888899996  99999999999999877433   477777888889999999999


Q ss_pred             CCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 001410          688 DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE  767 (1082)
Q Consensus       688 ~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~  767 (1082)
                      +|+|+++.|..|.|.||+||..|+.+++++|++.|+|+|.++..|.|+||.|+..|+.+++++|+++|+.+..       
T Consensus       139 ~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-------  211 (615)
T KOG0508|consen  139 HGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSVDIVQLLLKHGAKIDV-------  211 (615)
T ss_pred             cCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccHHHHHHHHhCCceeee-------
Confidence            9999999999999999999999999999999999999999999999999999999999999999999998865       


Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHH
Q 001410          768 FPLSRTPSDLASSNGHKGISGFLAE  792 (1082)
Q Consensus       768 D~~G~TPLhlAa~~G~~~iv~~LLe  792 (1082)
                      |..|.|||..|+..|+.++|.+|+.
T Consensus       212 d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  212 DGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             cCCCCchHHHHhhhcchHHHHHHhc
Confidence            5689999999999999999999996

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.86  E-value=1.1e-20  Score=202.26  Aligned_cols=176  Identities=15%  Similarity=0.058  Sum_probs=146.2

Q ss_pred             cccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHH--hcHHHHHHHHHHCCCCCCccC-CCCCcH
Q 001410          626 EGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKE--KLYSWLLRKVCEDGKGPCILD-DEGQGV  702 (1082)
Q Consensus       626 ~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~--~~~~~lv~~Lle~Gad~n~~d-~~G~Tp  702 (1082)
                      ..+.+||+.|+..+.+  +.++.|+..   .+..+..   +.++++.+..  .+...++++|++.|+++|.++ ..|.||
T Consensus        19 ~~~~~pL~~A~~~~~~--~~vk~Li~~---~n~~~~~---g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~Tp   90 (209)
T PHA02859         19 YRYCNPLFYYVEKDDI--EGVKKWIKF---VNDCNDL---YETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSA   90 (209)
T ss_pred             hccCcHHHHHHHhCcH--HHHHHHHHh---hhccCcc---CCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCH
Confidence            4558899999999995  888888844   2333322   2344444443  247789999999999999997 489999


Q ss_pred             HHHHHHc---CCHHHHHHHHhCCCCccccCCCCCCHHHHHHH--cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHH
Q 001410          703 LHLAASL---GYDWAIKPTVTAGVSINFRDLSGWTALHWAAY--CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL  777 (1082)
Q Consensus       703 LHlAa~~---G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~--~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhl  777 (1082)
                      ||+|+..   ++.+++++|+++|+++|.+|..|.||||+|+.  .++.+++++|+++|++++.      +|..|.||||.
T Consensus        91 Lh~a~~~~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~------~d~~g~t~Lh~  164 (209)
T PHA02859         91 LHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLN------KDFDNNNILYS  164 (209)
T ss_pred             HHHHHHhCccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccc------ccCCCCcHHHH
Confidence            9998864   47999999999999999999999999999976  4789999999999999988      56799999995


Q ss_pred             -HHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHH
Q 001410          778 -ASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKA  820 (1082)
Q Consensus       778 -Aa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~  820 (1082)
                       |+..|+.+++++|++.|++     ++.+|..|.||+++|....
T Consensus       165 ~a~~~~~~~iv~~Ll~~Gad-----i~~~d~~g~tpl~la~~~~  203 (209)
T PHA02859        165 YILFHSDKKIFDFLTSLGID-----INETNKSGYNCYDLIKFRN  203 (209)
T ss_pred             HHHhcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHhhhh
Confidence             5678899999999999954     8889999999999987543

>PHA02795 ankyrin-like protein; Provisional

Probab=99.85  E-value=4.2e-21  Score=222.63  Aligned_cols=202  Identities=15%  Similarity=-0.025  Sum_probs=169.0

Q ss_pred             eeeeccCCCCCCcccCCCCCCcchhHHHHHHHHHHHhCCCCCC------CCccccccHHHHHHH--hcccchHHHHHHHh
Q 001410          580 EFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQN------HLSEGLCEKQKLISK--IIQLKEEEESYQMV  651 (1082)
Q Consensus       580 ~feyl~~~~a~vn~~d~~g~~~t~Lhl~~rlvkLLl~~ga~~~------~~~~~g~t~lh~A~~--~~~l~~e~~~~Ll~  651 (1082)
                      .++|...+|+++|....+|  ..+..-..+++++|++.+++.+      .....+.++||+++.  .++  .+.+++|++
T Consensus        64 ~~~~~~~~~~~i~~~~~~~--~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~--~eiV~~LI~  139 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVDR--LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVE--IDIVDFMVD  139 (437)
T ss_pred             HHHHHHHcCcchhhhhhhh--HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCC--HHHHHHHHH
Confidence            4568888888888887776  2222226788999999997655      566778999999999  666  599999999


Q ss_pred             hcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccC------CCCCcHHHHHHHcCCHHHHHHHHhCCCCc
Q 001410          652 EANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD------DEGQGVLHLAASLGYDWAIKPTVTAGVSI  725 (1082)
Q Consensus       652 ~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d------~~G~TpLHlAa~~G~~~iv~~LL~~Gadv  725 (1082)
                      +|++++..+.     .++++.+...+...++++|+.+|++.+...      ..|.|++|.|+..++.+++++|+.+|+++
T Consensus       140 ~GADIn~~~~-----~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADI  214 (437)
T PHA02795        140 HGAVIYKIEC-----LNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDI  214 (437)
T ss_pred             CCCCCCCCCC-----CCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCc
Confidence            9999987542     345566777778889999999998543222      34889999999999999999999999999


Q ss_pred             cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC--------CHHHHHHHHHcCCC
Q 001410          726 NFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG--------HKGISGFLAESSLT  796 (1082)
Q Consensus       726 n~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G--------~~~iv~~LLe~Ga~  796 (1082)
                      |.+|..|.||||+|+..|+.++|++|+++||++++      +|..|.||||+|+..|        |.+++++|+++|++
T Consensus       215 N~kD~~G~TpLh~Aa~~g~~eiVelLL~~GAdIN~------~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gad  287 (437)
T PHA02795        215 NQLDAGGRTLLYRAIYAGYIDLVSWLLENGANVNA------VMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLS  287 (437)
T ss_pred             CcCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC------cCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCC
Confidence            99999999999999999999999999999999998      5579999999999998        47999999999865

>KOG0508 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.84  E-value=4.4e-21  Score=214.68  Aligned_cols=194  Identities=13%  Similarity=0.026  Sum_probs=168.7

Q ss_pred             ccccccHHHHHHHhcccchHHHHHHHh-hcCCCCc-----cCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCC
Q 001410          625 SEGLCEKQKLISKIIQLKEEEESYQMV-EANPEKN-----LSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDE  698 (1082)
Q Consensus       625 ~~~g~t~lh~A~~~~~l~~e~~~~Ll~-~ga~~n~-----~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~  698 (1082)
                      ..+|.+|+-+|+..++.  ++++||++ .+++...     .+...-.+.+++.++...++..+|+.|+++|+++|.....
T Consensus        39 ~~~g~tPL~iaaRnGH~--~vVeyLle~~~a~~e~~GsV~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~T  116 (615)
T KOG0508|consen   39 VQNGGTPLLIAARNGHA--DVVEYLLEHCRASPEQGGSVRFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRT  116 (615)
T ss_pred             ccCCCCceeeehhcCcH--HHHHHHHHHhcCCccCCceEEeCCcccCCCchhhHHhccCcHHHHHHHHHhcCcccccccc
Confidence            34567999999999996  99999996 3333322     1212225667888889999999999999999999999999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001410          699 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA  778 (1082)
Q Consensus       699 G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlA  778 (1082)
                      ..|||-.||.-|+.++|++|+++|+|++..|..|.|.||+||+.||.+|+++|++.|||+|.      ++..|.|+||.|
T Consensus       117 NStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qyLle~gADvn~------ks~kGNTALH~c  190 (615)
T KOG0508|consen  117 NSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQYLLEQGADVNA------KSYKGNTALHDC  190 (615)
T ss_pred             CCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHHHHHhCCCcch------hcccCchHHHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999      457999999999


Q ss_pred             HHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHHhcCCCC
Q 001410          779 SSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPA  832 (1082)
Q Consensus       779 a~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle~~a~~~  832 (1082)
                      +..|+.+++++|+.+|+.     ++. |..|.||+..|+..++..++++++...
T Consensus       191 aEsG~vdivq~Ll~~ga~-----i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~~~  238 (615)
T KOG0508|consen  191 AESGSVDIVQLLLKHGAK-----IDV-DGHGMTPLLLAAVTGHTDIVERLLQCE  238 (615)
T ss_pred             hhcccHHHHHHHHhCCce-----eee-cCCCCchHHHHhhhcchHHHHHHhcCC
Confidence            999999999999999855     554 444999999999999988888887533

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.84  E-value=1.6e-20  Score=201.15  Aligned_cols=176  Identities=14%  Similarity=0.074  Sum_probs=133.9

Q ss_pred             ccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHHH
Q 001410          529 KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHL  608 (1082)
Q Consensus       529 ~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~~  608 (1082)
                      ++++||..|++++++.|+..+     +..+..|.||||+|+.++..                                +.
T Consensus        24 pL~~A~~~~~~~~vk~Li~~~-----n~~~~~g~TpLh~a~~~~~~--------------------------------~~   66 (209)
T PHA02859         24 PLFYYVEKDDIEGVKKWIKFV-----NDCNDLYETPIFSCLEKDKV--------------------------------NV   66 (209)
T ss_pred             HHHHHHHhCcHHHHHHHHHhh-----hccCccCCCHHHHHHHcCCC--------------------------------CH
Confidence            467888899999888888642     33567788999988875431                                12


Q ss_pred             HHHHHHHhCCCCCCCCc-cccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHH
Q 001410          609 RLERILSMRSSPQNHLS-EGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE  687 (1082)
Q Consensus       609 rlvkLLl~~ga~~~~~~-~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle  687 (1082)
                      .++++|+..|++.+..+ ..|.||+|+++.....                                   +...++++|++
T Consensus        67 eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~-----------------------------------~~~eiv~~Ll~  111 (209)
T PHA02859         67 EILKFLIENGADVNFKTRDNNLSALHHYLSFNKN-----------------------------------VEPEILKILID  111 (209)
T ss_pred             HHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCcc-----------------------------------ccHHHHHHHHH
Confidence            33344444443333332 2456666665443320                                   12356888999


Q ss_pred             CCCCCCccCCCCCcHHHHHHH--cCCHHHHHHHHhCCCCccccCCCCCCHHHH-HHHcCCHHHHHHHHHcCCCCCCCCCC
Q 001410          688 DGKGPCILDDEGQGVLHLAAS--LGYDWAIKPTVTAGVSINFRDLSGWTALHW-AAYCGREKTVAVLLSLGAAPGLLTDP  764 (1082)
Q Consensus       688 ~Gad~n~~d~~G~TpLHlAa~--~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~-Aa~~G~~~iV~~LL~~GAd~n~~~d~  764 (1082)
                      +|+++|.+|..|.||||+|+.  .++.+++++|+++|++++.+|..|.||||. |+..|+.+++++|+++|++++.    
T Consensus       112 ~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~----  187 (209)
T PHA02859        112 SGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINE----  187 (209)
T ss_pred             CCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCC----
Confidence            999999999999999999876  468999999999999999999999999995 6678899999999999999988    


Q ss_pred             CCCCCCCCCHHHHHHHcC
Q 001410          765 SPEFPLSRTPSDLASSNG  782 (1082)
Q Consensus       765 ~~~D~~G~TPLhlAa~~G  782 (1082)
                        +|..|.||||+|..++
T Consensus       188 --~d~~g~tpl~la~~~~  203 (209)
T PHA02859        188 --TNKSGYNCYDLIKFRN  203 (209)
T ss_pred             --CCCCCCCHHHHHhhhh
Confidence              5579999999998764

>PHA02795 ankyrin-like protein; Provisional

Probab=99.82  E-value=2.6e-19  Score=207.77  Aligned_cols=202  Identities=9%  Similarity=-0.022  Sum_probs=163.9

Q ss_pred             HHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCC------ccCcCcchhHHHHHHHH-HhcHHHHH
Q 001410          610 LERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEK------NLSQHVEKYQILQKIMK-EKLYSWLL  682 (1082)
Q Consensus       610 lvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n------~~~~~~~~~~~l~~~a~-~~~~~~lv  682 (1082)
                      +-++++..|++.+....++     +++..+.  .+.++.|++++++++      ..+  ....++++.++. ..++..++
T Consensus        64 ~~~~~~~~~~~i~~~~~~~-----~~~~~~~--k~~~~~l~s~~~~~~~~~~~~~~~--~~~~~~L~~~~~n~~n~~eiV  134 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVDR-----LFAYITY--KDIISALVSKNYMEDIFSIIIKNC--NSVQDLLLYYLSNAYVEIDIV  134 (437)
T ss_pred             HHHHHHHcCcchhhhhhhh-----HHhhcch--HHHHHHHHhcccccchhhhhhhcc--ccccHHHHHHHHhcCCCHHHH
Confidence            4467788886666555555     7777777  599999999999987      322  223344444444 26888999


Q ss_pred             HHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCcccc------CCCCCCHHHHHHHcCCHHHHHHHHHcCC
Q 001410          683 RKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFR------DLSGWTALHWAAYCGREKTVAVLLSLGA  756 (1082)
Q Consensus       683 ~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~------D~~G~TpLH~Aa~~G~~~iV~~LL~~GA  756 (1082)
                      ++|+++||+++.+  .+.||||.|+..|+.+++++|+++|++.+..      +..|.||+|.|+..++.+++++|+++||
T Consensus       135 ~~LI~~GADIn~~--~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GA  212 (437)
T PHA02795        135 DFMVDHGAVIYKI--ECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIE  212 (437)
T ss_pred             HHHHHCCCCCCCC--CCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcC
Confidence            9999999999984  4589999999999999999999999854322      2458899999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHH------------HHHHHH
Q 001410          757 APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA------------KAVQTV  824 (1082)
Q Consensus       757 d~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~------------~~v~~L  824 (1082)
                      ++|.      +|..|.||||+|+..|+.+++++|+++|+     +++.++..|.||+|.|+.            +.++.|
T Consensus       213 DIN~------kD~~G~TpLh~Aa~~g~~eiVelLL~~GA-----dIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelL  281 (437)
T PHA02795        213 DINQ------LDAGGRTLLYRAIYAGYIDLVSWLLENGA-----NVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEIL  281 (437)
T ss_pred             CcCc------CCCCCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHH
Confidence            9998      56799999999999999999999999995     488999999999999875            456777


Q ss_pred             HHhcCCCCC
Q 001410          825 SEKTATPAN  833 (1082)
Q Consensus       825 le~~a~~~a  833 (1082)
                      ++.+++.+.
T Consensus       282 L~~gadI~~  290 (437)
T PHA02795        282 LREPLSIDC  290 (437)
T ss_pred             HhCCCCCCc
Confidence            777665554

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.80  E-value=9.7e-19  Score=222.31  Aligned_cols=190  Identities=13%  Similarity=-0.021  Sum_probs=156.4

Q ss_pred             HHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCC
Q 001410          610 LERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDG  689 (1082)
Q Consensus       610 lvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~G  689 (1082)
                      +..+|...+..  ..+..+.++++.|+..++  .+.++.|+..|++.+..+..   +.+++|.|+..++.+++++|+++|
T Consensus       509 v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~--~~~l~~Ll~~G~d~n~~d~~---G~TpLh~Aa~~g~~~~v~~Ll~~g  581 (823)
T PLN03192        509 VGDLLGDNGGE--HDDPNMASNLLTVASTGN--AALLEELLKAKLDPDIGDSK---GRTPLHIAASKGYEDCVLVLLKHA  581 (823)
T ss_pred             HHHHHhhcccc--cCCccchhHHHHHHHcCC--HHHHHHHHHCCCCCCCCCCC---CCCHHHHHHHcChHHHHHHHHhcC
Confidence            33444444432  223345688899998888  48899999999998887644   447777777888999999999999


Q ss_pred             CCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCC
Q 001410          690 KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFP  769 (1082)
Q Consensus       690 ad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~  769 (1082)
                      +++|.+|..|.||||+|+..|+.+++++|+..++..+.  ..|.|+||+||..|+.++++.|+++|+++|.      +|.
T Consensus       582 adin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~------~d~  653 (823)
T PLN03192        582 CNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDS------EDH  653 (823)
T ss_pred             CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCC------CCC
Confidence            99999999999999999999999999999988876553  4677999999999999999999999999988      567


Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCC-CcHHHHHHHH
Q 001410          770 LSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD-DGALEDSIAK  819 (1082)
Q Consensus       770 ~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g-~tal~~a~~~  819 (1082)
                      .|.||||+|+..|+.+++++|+++|++     ++..|..| .+|.+++...
T Consensus       654 ~G~TpLh~A~~~g~~~iv~~Ll~~GAd-----v~~~~~~g~~t~~~l~~~~  699 (823)
T PLN03192        654 QGATALQVAMAEDHVDMVRLLIMNGAD-----VDKANTDDDFSPTELRELL  699 (823)
T ss_pred             CCCCHHHHHHHCCcHHHHHHHHHcCCC-----CCCCCCCCCCCHHHHHHHH
Confidence            999999999999999999999999955     77777777 8888776543

>PHA02792 ankyrin-like protein; Provisional

Probab=99.78  E-value=5.2e-18  Score=203.41  Aligned_cols=287  Identities=11%  Similarity=-0.025  Sum_probs=202.4

Q ss_pred             HHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCC--cccceeeeeeccCCCCCCcccCCCCCCcchhHH------HHHHH
Q 001410          540 EVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRL--ACSEVREFDYIVGSVKDADISDIYGSSTSESFL------HLRLE  611 (1082)
Q Consensus       540 eVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~--~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl------~~rlv  611 (1082)
                      .-...|++.|+.+-+   ...|.||||.-...++  .-.+++..+     +...+.++-+|  .+++|+      +++++
T Consensus        19 ~~~~~l~~~g~~~~~---~~~~~t~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~n~~~--~~~~~~~~s~n~~lElv   88 (631)
T PHA02792         19 CSAQSLIESGANPLY---EYDGETPLKAYVTKKNNNIKNDVVILL-----LSSVDYKNIND--FDIFEYLCSDNIDIELL   88 (631)
T ss_pred             HHHHHHHHcCCCccc---ccCCCccHHHHHhhhhhhHHHHHHHHH-----HhCCCcCccCC--ccHHHHHHHhcccHHHH
Confidence            345677899988443   4678899998765444  112232211     12233444444  456665      78999


Q ss_pred             HHHHhCCCCCCCCccccccHHHHHHH-hcccchHHHHHHHhhcCCCCccC------------------------------
Q 001410          612 RILSMRSSPQNHLSEGLCEKQKLISK-IIQLKEEEESYQMVEANPEKNLS------------------------------  660 (1082)
Q Consensus       612 kLLl~~ga~~~~~~~~g~t~lh~A~~-~~~l~~e~~~~Ll~~ga~~n~~~------------------------------  660 (1082)
                      ++|+..|++.+..++++.+++++|.. .++  .++++.|++.|++.....                              
T Consensus        89 k~LI~~GAdvN~~~n~~~~~l~ya~~~~~~--~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~  166 (631)
T PHA02792         89 KLLISKGLEINSIKNGINIVEKYATTSNPN--VDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYDYDY  166 (631)
T ss_pred             HHHHHcCCCcccccCCCCcceeEeecCCCC--hHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhcccccccc
Confidence            99999998888888888898899865 466  489999999998743211                              


Q ss_pred             ---cCcchhHHHHHHHHHhc-------HHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcC--CHHHH-------------
Q 001410          661 ---QHVEKYQILQKIMKEKL-------YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG--YDWAI-------------  715 (1082)
Q Consensus       661 ---~~~~~~~~l~~~a~~~~-------~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G--~~~iv-------------  715 (1082)
                         .++..+.++++.+....       ...+++.|+.+|++++.+|..|.||||+|+...  ..+++             
T Consensus       167 ~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~~~~~  246 (631)
T PHA02792        167 TTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYSGNEL  246 (631)
T ss_pred             ccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhccccccch
Confidence               11122445555554444       578999999999999999999999999999888  33333             


Q ss_pred             ------------------------------------------------------------------------------HH
Q 001410          716 ------------------------------------------------------------------------------KP  717 (1082)
Q Consensus       716 ------------------------------------------------------------------------------~~  717 (1082)
                                                                                                    ++
T Consensus       247 ~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~q~~l~~Yl~~~~v~ieiIK~  326 (631)
T PHA02792        247 MNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYILELCNSLRNNIIISSILKRYTDSIQDLLSEYVSYHTVYINVIKC  326 (631)
T ss_pred             HhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchhhhhhhhhhhhHHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHH
Confidence                                                                                          34


Q ss_pred             HHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHH---HHHHHHHcC
Q 001410          718 TVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKG---ISGFLAESS  794 (1082)
Q Consensus       718 LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~---iv~~LLe~G  794 (1082)
                      |+++|++++  ...+..++|.||..|+.++|++|+++||+++..+.    +..+.||||+|+..+..+   ++++|+++|
T Consensus       327 LId~Ga~~~--r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~----~g~~~TpLh~A~~n~~~~v~~IlklLIs~G  400 (631)
T PHA02792        327 MIDEGATLY--RFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDD----NIINIMPLFPTLSIHESDVLSILKLCKPYI  400 (631)
T ss_pred             HHHCCCccc--cCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcC----CCCChhHHHHHHHhccHhHHHHHHHHHhcC
Confidence            444454443  11256678999999999999999999999988441    223579999988776654   578889888


Q ss_pred             CCcccccCccCCCCCCcHHHHHH----HHHHHHHHHhcCCCCCCCCcccccccccchhhhhhhhhhh
Q 001410          795 LTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAA  857 (1082)
Q Consensus       795 a~~~~adln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~a~~~~e~~~~lkdsltav~~Aaqaa  857 (1082)
                      +     ++|.+|..|.||+|.|.    .+.++.|++.|++.+.        ....+.|+++.|..++
T Consensus       401 A-----DIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~--------kD~~G~TpL~~A~~~~  454 (631)
T PHA02792        401 D-----DINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINI--------TTKYGSTCIGICVILA  454 (631)
T ss_pred             C-----ccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCC--------cCCCCCCHHHHHHHHH
Confidence            4     58999999999999987    4566677777765554        3557788998886644

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.77  E-value=1.1e-18  Score=179.49  Aligned_cols=215  Identities=17%  Similarity=0.061  Sum_probs=142.6

Q ss_pred             chhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHHHHHH
Q 001410          531 KWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRL  610 (1082)
Q Consensus       531 ~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl~~rl  610 (1082)
                      .-+...|+.+++...++-... |...++..|+..+++++-.++  ...+.  ..+..++..|..+.-+  |+++.+.+  
T Consensus        67 ~~~~~s~nsd~~v~s~~~~~~-~~~~t~p~g~~~~~v~ap~~s--~~k~s--ttltN~~rgnevs~~p--~s~~slsV--  137 (296)
T KOG0502|consen   67 TVAVRSGNSDVAVQSAQLDPD-AIDETDPEGWSALLVAAPCGS--VDKVS--TTLTNGARGNEVSLMP--WSPLSLSV--  137 (296)
T ss_pred             chhhhcCCcHHHHHhhccCCC-CCCCCCchhhhhhhhcCCCCC--cceee--eeecccccCCcccccc--CChhhHHH--
Confidence            345667788888777776666 555566669999999987666  44443  3445556556555444  44443322  


Q ss_pred             HHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCC
Q 001410          611 ERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGK  690 (1082)
Q Consensus       611 vkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Ga  690 (1082)
                                                ...++  ++...+.  ...+|..   +..+.+++.+++.+++..++++|++.|+
T Consensus       138 --------------------------hql~L--~~~~~~~--~n~VN~~---De~GfTpLiWAaa~G~i~vV~fLL~~GA  184 (296)
T KOG0502|consen  138 --------------------------HQLHL--DVVDLLV--NNKVNAC---DEFGFTPLIWAAAKGHIPVVQFLLNSGA  184 (296)
T ss_pred             --------------------------HHHHH--HHHHHHh--hccccCc---cccCchHhHHHHhcCchHHHHHHHHcCC
Confidence                                      11121  1221111  1222332   2445566677777777777777777788


Q ss_pred             CCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 001410          691 GPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL  770 (1082)
Q Consensus       691 d~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~  770 (1082)
                      +|+...+...|+|.+|+..|+.++|++||.+++|+|.-|.+|-|||-||+..||.+||+.||..||+++..+      ..
T Consensus       185 dp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGAd~t~e~------ds  258 (296)
T KOG0502|consen  185 DPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGADVTQED------DS  258 (296)
T ss_pred             ChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCCCccccc------cc
Confidence            887777777788888888888888888888888888888888888888888888888888888888777744      47


Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcC
Q 001410          771 SRTPSDLASSNGHKGISGFLAESS  794 (1082)
Q Consensus       771 G~TPLhlAa~~G~~~iv~~LLe~G  794 (1082)
                      |++++.+|+..|+. +|+..+++-
T Consensus       259 Gy~~mdlAValGyr-~Vqqvie~h  281 (296)
T KOG0502|consen  259 GYWIMDLAVALGYR-IVQQVIEKH  281 (296)
T ss_pred             CCcHHHHHHHhhhH-HHHHHHHHH
Confidence            78888888887777 666666654

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.77  E-value=1.9e-19  Score=214.52  Aligned_cols=288  Identities=13%  Similarity=0.027  Sum_probs=243.2

Q ss_pred             cccccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhH
Q 001410          526 EVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESF  605 (1082)
Q Consensus       526 ~~~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lh  605 (1082)
                      +.+++..+|.-|+.|.+..||..|+.  +.-.+..|+|||.+|+..||  +.++.  .++++.+++++..... .-|+|.
T Consensus       757 ~~t~LT~acaggh~e~vellv~rgan--iehrdkkgf~plImaatagh--~tvV~--~llk~ha~veaQsdrt-kdt~lS  829 (2131)
T KOG4369|consen  757 IKTNLTSACAGGHREEVELLVVRGAN--IEHRDKKGFVPLIMAATAGH--ITVVQ--DLLKAHADVEAQSDRT-KDTMLS  829 (2131)
T ss_pred             ccccccccccCccHHHHHHHHHhccc--ccccccccchhhhhhcccCc--hHHHH--HHHhhhhhhhhhcccc-cCceEE
Confidence            34567899999999999999999998  77789999999999999999  66765  5666668887763322 466666


Q ss_pred             H-----HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHH
Q 001410          606 L-----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSW  680 (1082)
Q Consensus       606 l-----~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~  680 (1082)
                      |     ..++|.+|+..+++..+.+....+|+.+|..-+.  .+++..|+..|..+|..... .++..++.++.-.++..
T Consensus       830 lacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy--~~iI~~llS~GseInSrtgS-klgisPLmlatmngh~~  906 (2131)
T KOG4369|consen  830 LACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGY--TKIIHALLSSGSEINSRTGS-KLGISPLMLATMNGHQA  906 (2131)
T ss_pred             EecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcch--HHHHHHHhhccccccccccc-ccCcchhhhhhhccccH
Confidence            6     6799999999998888888889999999988888  58999999999999887633 45677888888899999


Q ss_pred             HHHHHHHCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Q 001410          681 LLRKVCEDGKGPCILD-DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPG  759 (1082)
Q Consensus       681 lv~~Lle~Gad~n~~d-~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n  759 (1082)
                      .++.|++.|.++|+.- .+-+|+|-+|+..|+.++|.+||.+.+++..+-+.|.|||+-+|..|.+++-++||..|||+|
T Consensus       907 at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~n  986 (2131)
T KOG4369|consen  907 ATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTN  986 (2131)
T ss_pred             HHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccc
Confidence            9999999999999864 456899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHH----HHHHHHHHHhcCCCC
Q 001410          760 LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPA  832 (1082)
Q Consensus       760 ~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~----~~~v~~Lle~~a~~~  832 (1082)
                      +.--+    ..-.|+|-+++..||...+..|+...+.     ++++|++|.|+|-+++    ...+..|++.++++.
T Consensus       987 asPvp----~T~dtalti~a~kGh~kfv~~lln~~at-----v~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d 1054 (2131)
T KOG4369|consen  987 ASPVP----NTWDTALTIPANKGHTKFVPKLLNGDAT-----VRVPNKKGCTVLWLASAGGALSSCPILVSSVADAD 1054 (2131)
T ss_pred             cCCCC----CcCCccceeecCCCchhhhHHhhCCccc-----eecccCCCCcccchhccCCccccchHHhhcccChh
Confidence            85432    2446899999999999999999987744     8889999999887755    445566666666554

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.77  E-value=3e-18  Score=216.01  Aligned_cols=225  Identities=15%  Similarity=0.011  Sum_probs=156.5

Q ss_pred             ccchhhccCCcHHHHHHHHC--CCCcccCCCCCCCChhHH-HHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhH
Q 001410          529 KCKWSCMFAEVEVPAEVLAD--GVLCCRIPPHAVGRVPFY-ITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESF  605 (1082)
Q Consensus       529 ~~~~ac~fG~veVv~~LLq~--Gv~~C~~p~~~~G~TPLh-vA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lh  605 (1082)
                      ....||..|+++.+..+++.  +.+  .+..+..|+|||| .|+.+++  .++++                         
T Consensus        20 ~~l~A~~~g~~~~v~~lL~~~~~~~--in~~d~~G~t~Lh~~A~~~~~--~eiv~-------------------------   70 (743)
T TIGR00870        20 AFLPAAERGDLASVYRDLEEPKKLN--INCPDRLGRSALFVAAIENEN--LELTE-------------------------   70 (743)
T ss_pred             HHHHHHHcCCHHHHHHHhccccccC--CCCcCccchhHHHHHHHhcCh--HHHHH-------------------------
Confidence            35679999999999999998  666  6667888999999 7777766  44443                         


Q ss_pred             HHHHHHHHHHhCCCCCCCCccccccHHHHHHHhc--ccchHHHHHHHhhcCC------CCccC-cCcchhHHHHHHHHHh
Q 001410          606 LHLRLERILSMRSSPQNHLSEGLCEKQKLISKII--QLKEEEESYQMVEANP------EKNLS-QHVEKYQILQKIMKEK  676 (1082)
Q Consensus       606 l~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~--~l~~e~~~~Ll~~ga~------~n~~~-~~~~~~~~l~~~a~~~  676 (1082)
                             +|+..++    .+..|.|+||.|+...  .. ...+..+...+..      .+... .....+.++++.|...
T Consensus        71 -------lLl~~g~----~~~~G~T~Lh~A~~~~~~~v-~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~G~TpLhlAa~~  138 (743)
T TIGR00870        71 -------LLLNLSC----RGAVGDTLLHAISLEYVDAV-EAILLHLLAAFRKSGPLELANDQYTSEFTPGITALHLAAHR  138 (743)
T ss_pred             -------HHHhCCC----CCCcChHHHHHHHhccHHHH-HHHHHHHhhcccccCchhhhccccccccCCCCcHHHHHHHh
Confidence                   3333332    2334556666665521  11 1222222211111      00100 0112345666666667


Q ss_pred             cHHHHHHHHHHCCCCCCccC--------------CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHc
Q 001410          677 LYSWLLRKVCEDGKGPCILD--------------DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYC  742 (1082)
Q Consensus       677 ~~~~lv~~Lle~Gad~n~~d--------------~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~  742 (1082)
                      ++..++++|+++|++++.++              ..|.||||+|+..|+.+++++|+++|+|+|.+|..|+||||+|+..
T Consensus       139 ~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~gadin~~d~~g~T~Lh~A~~~  218 (743)
T TIGR00870       139 QNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPADILTADSLGNTLLHLLVME  218 (743)
T ss_pred             CCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCcchhhHhhhhhHHHHHHHhh
Confidence            77777777777777777543              3599999999999999999999999999999999999999999998


Q ss_pred             C---------CHHHHHHHHHcCCCCCCCCC-CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 001410          743 G---------REKTVAVLLSLGAAPGLLTD-PSPEFPLSRTPSDLASSNGHKGISGFLAESS  794 (1082)
Q Consensus       743 G---------~~~iV~~LL~~GAd~n~~~d-~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~G  794 (1082)
                      +         ...+.++++..++....... .+..|..|.||||+|+..|+.+++++|++.+
T Consensus       219 ~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~~  280 (743)
T TIGR00870       219 NEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAIK  280 (743)
T ss_pred             hhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHHH
Confidence            7         34567777777776532100 0236789999999999999999999999843

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.76  E-value=4.5e-18  Score=175.72  Aligned_cols=132  Identities=21%  Similarity=0.132  Sum_probs=113.9

Q ss_pred             HHHHHHHHHhcHH---HHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHH---HHHHHhCCCCccccC-CCCCCHHHHH
Q 001410          667 QILQKIMKEKLYS---WLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWA---IKPTVTAGVSINFRD-LSGWTALHWA  739 (1082)
Q Consensus       667 ~~l~~~a~~~~~~---~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~i---v~~LL~~Gadvn~~D-~~G~TpLH~A  739 (1082)
                      ..++++++.+...   .+++.|++.|++++.+|..|+||||+||..|+.++   +++|+..|+++|.+| ..|.||||+|
T Consensus        22 ~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpLh~A  101 (166)
T PHA02743         22 NTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLLHIA  101 (166)
T ss_pred             cHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Confidence            5677777766654   45557788999999999999999999999998654   789999999999998 5899999999


Q ss_pred             HHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCC
Q 001410          740 AYCGREKTVAVLLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD  809 (1082)
Q Consensus       740 a~~G~~~iV~~LL~-~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g  809 (1082)
                      +..|+.+++++|+. .|++++.      +|..|.||||+|+..|+.+++++|+++|++     ++.++..|
T Consensus       102 ~~~g~~~iv~~Ll~~~gad~~~------~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~-----~~~~~~~~  161 (166)
T PHA02743        102 ASTKNYELAEWLCRQLGVNLGA------INYQHETAYHIAYKMRDRRMMEILRANGAV-----CDDPLSIG  161 (166)
T ss_pred             HHhCCHHHHHHHHhccCCCccC------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcccCC
Confidence            99999999999995 8999988      557999999999999999999999999955     56565544

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.76  E-value=9.5e-18  Score=213.32  Aligned_cols=154  Identities=20%  Similarity=0.192  Sum_probs=136.1

Q ss_pred             HHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHH
Q 001410          667 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK  746 (1082)
Q Consensus       667 ~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~  746 (1082)
                      ..++.++ ..+...+++.|++.|+++|..|..|+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+
T Consensus       527 ~~L~~Aa-~~g~~~~l~~Ll~~G~d~n~~d~~G~TpLh~Aa~~g~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~  605 (823)
T PLN03192        527 SNLLTVA-STGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHK  605 (823)
T ss_pred             hHHHHHH-HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcChHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHH
Confidence            4455544 566778899999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHH----HHHHH
Q 001410          747 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQ  822 (1082)
Q Consensus       747 iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~----~~~v~  822 (1082)
                      ++++|+..++..+.        ..|.+|||+|+.+|+.+++++|+++|++     +|.+|..|.||+|.|.    .+.++
T Consensus       606 iv~~L~~~~~~~~~--------~~~~~~L~~Aa~~g~~~~v~~Ll~~Gad-----in~~d~~G~TpLh~A~~~g~~~iv~  672 (823)
T PLN03192        606 IFRILYHFASISDP--------HAAGDLLCTAAKRNDLTAMKELLKQGLN-----VDSEDHQGATALQVAMAEDHVDMVR  672 (823)
T ss_pred             HHHHHHhcCcccCc--------ccCchHHHHHHHhCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCcHHHHH
Confidence            99999998876544        4678999999999999999999999954     8889999999999987    56677


Q ss_pred             HHHHhcCCCCCC
Q 001410          823 TVSEKTATPAND  834 (1082)
Q Consensus       823 ~Lle~~a~~~a~  834 (1082)
                      .|++.+++.+..
T Consensus       673 ~Ll~~GAdv~~~  684 (823)
T PLN03192        673 LLIMNGADVDKA  684 (823)
T ss_pred             HHHHcCCCCCCC
Confidence            777777766653

>KOG0502 consensus Integral membrane ankyrin-repeat protein Kidins220 (protein kinase D substrate) [General function prediction only]

Probab=99.75  E-value=4e-18  Score=175.44  Aligned_cols=187  Identities=16%  Similarity=0.014  Sum_probs=155.2

Q ss_pred             cccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHH
Q 001410          626 EGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHL  705 (1082)
Q Consensus       626 ~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHl  705 (1082)
                      ..|..+++.++-..+  ......++..+...|..+   ...+.+..+....++...+..+  ...-+|..|+.|.|||.|
T Consensus        94 p~g~~~~~v~ap~~s--~~k~sttltN~~rgnevs---~~p~s~~slsVhql~L~~~~~~--~~n~VN~~De~GfTpLiW  166 (296)
T KOG0502|consen   94 PEGWSALLVAAPCGS--VDKVSTTLTNGARGNEVS---LMPWSPLSLSVHQLHLDVVDLL--VNNKVNACDEFGFTPLIW  166 (296)
T ss_pred             chhhhhhhhcCCCCC--cceeeeeecccccCCccc---cccCChhhHHHHHHHHHHHHHH--hhccccCccccCchHhHH
Confidence            337777777776666  366677777888888776   3445666676666665554333  345689999999999999


Q ss_pred             HHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHH
Q 001410          706 AASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKG  785 (1082)
Q Consensus       706 Aa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~  785 (1082)
                      |+..|++.+|++||+.||+++...+...|+|.+|+..|..+||++||.++.|+|.      .|.+|-|||-+|+..||.+
T Consensus       167 Aaa~G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNv------yDwNGgTpLlyAvrgnhvk  240 (296)
T KOG0502|consen  167 AAAKGHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNV------YDWNGGTPLLYAVRGNHVK  240 (296)
T ss_pred             HHhcCchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcce------eccCCCceeeeeecCChHH
Confidence            9999999999999999999999999999999999999999999999999999998      5689999999999999999


Q ss_pred             HHHHHHHcCCCcccccCccCCCCCCcHHHHHH---HHHHHHHHHhcCC
Q 001410          786 ISGFLAESSLTSLLLSLKMNDSADDGALEDSI---AKAVQTVSEKTAT  830 (1082)
Q Consensus       786 iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~---~~~v~~Lle~~a~  830 (1082)
                      |++.|++.|++     ++..+..|.++...|.   ...|+.+++..+.
T Consensus       241 cve~Ll~sGAd-----~t~e~dsGy~~mdlAValGyr~Vqqvie~h~l  283 (296)
T KOG0502|consen  241 CVESLLNSGAD-----VTQEDDSGYWIMDLAVALGYRIVQQVIEKHAL  283 (296)
T ss_pred             HHHHHHhcCCC-----cccccccCCcHHHHHHHhhhHHHHHHHHHHHH
Confidence            99999999955     8888888999988765   4566666666543

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.73  E-value=3.3e-17  Score=163.42  Aligned_cols=140  Identities=20%  Similarity=0.166  Sum_probs=116.7

Q ss_pred             HHHHHHHhcHHHHHHHHHHCCCC-CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHH
Q 001410          669 LQKIMKEKLYSWLLRKVCEDGKG-PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT  747 (1082)
Q Consensus       669 l~~~a~~~~~~~lv~~Lle~Gad-~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~i  747 (1082)
                      +...+++++....|+.|++..++ +|.+|.+|.||||-|+.+|+.++|..|+..||+++++...||||||-||...+.+|
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v  145 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV  145 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence            44455556655666777766554 99999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCH-HHHHHHHHc-CCCcccccCccCCCCCCcHHHHHHHH
Q 001410          748 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK-GISGFLAES-SLTSLLLSLKMNDSADDGALEDSIAK  819 (1082)
Q Consensus       748 V~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~-~iv~~LLe~-Ga~~~~adln~~d~~g~tal~~a~~~  819 (1082)
                      +..||++|||+|+.+      ....||||+||...+. ..+.+|+.. ++     ....++..+.||+.+|...
T Consensus       146 a~~LLqhgaDVnA~t------~g~ltpLhlaa~~rn~r~t~~~Ll~dryi-----~pg~~nn~eeta~~iARRT  208 (228)
T KOG0512|consen  146 AGRLLQHGADVNAQT------KGLLTPLHLAAGNRNSRDTLELLLHDRYI-----HPGLKNNLEETAFDIARRT  208 (228)
T ss_pred             HHHHHhccCcccccc------cccchhhHHhhcccchHHHHHHHhhcccc-----ChhhhcCccchHHHHHHHh
Confidence            999999999999977      4779999999988764 456666543 32     3455777789999998754

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.71  E-value=2.4e-17  Score=188.98  Aligned_cols=223  Identities=21%  Similarity=0.226  Sum_probs=175.7

Q ss_pred             chhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH----
Q 001410          531 KWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL----  606 (1082)
Q Consensus       531 ~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl----  606 (1082)
                      -=||+.|+.+-+..||..|+.  .+..+.+|.|+||=+|...+  .+|+.  |++..+++||..|.+|  |+|+|-    
T Consensus        45 l~A~~~~d~~ev~~ll~~ga~--~~~~n~DglTalhq~~id~~--~e~v~--~l~e~ga~Vn~~d~e~--wtPlhaaasc  116 (527)
T KOG0505|consen   45 LEACSRGDLEEVRKLLNRGAS--PNLCNVDGLTALHQACIDDN--LEMVK--FLVENGANVNAQDNEG--WTPLHAAASC  116 (527)
T ss_pred             HhccccccHHHHHHHhccCCC--ccccCCccchhHHHHHhccc--HHHHH--HHHHhcCCcccccccc--CCcchhhccc
Confidence            348999999999999999987  56678899999999999888  77776  7888899999999998  999998    


Q ss_pred             -HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHH-hhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHH
Q 001410          607 -HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQM-VEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK  684 (1082)
Q Consensus       607 -~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll-~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~  684 (1082)
                       |+.++.+|+..|+.....+..|..|..++..-..+  ++....+ ..+.++..     .....-...     ... +..
T Consensus       117 g~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~--~~l~~~~~r~gi~iea-----~R~~~e~~m-----l~D-~~q  183 (527)
T KOG0505|consen  117 GYLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATL--DVLETEMARQGIDIEA-----ARKAEEQTM-----LDD-ARQ  183 (527)
T ss_pred             ccHHHHHHHHHhhhhhhhccCCCCCccccccCcchh--HHHHHHHHHhcccHHH-----HhhhhHHHH-----HHH-HHH
Confidence             88999999999987777777777776665444332  2222222 01111110     000000000     111 223


Q ss_pred             HHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 001410          685 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP  764 (1082)
Q Consensus       685 Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~  764 (1082)
                      .+..|...++.+..|-|.||.|+..|+.++.++||.+|.+++.+|.+||||||.||..|..+++++|+.+|++.+..+  
T Consensus       184 ~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t--  261 (527)
T KOG0505|consen  184 WLNAGAELDARHARGATALHVAAANGYTEVAALLLQAGYSVNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKT--  261 (527)
T ss_pred             HHhccccccccccccchHHHHHHhhhHHHHHHHHHHhccCcccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhh--
Confidence            445899999999889999999999999999999999999999999999999999999999999999999999999965  


Q ss_pred             CCCCCCCCCHHHHHHH
Q 001410          765 SPEFPLSRTPSDLASS  780 (1082)
Q Consensus       765 ~~~D~~G~TPLhlAa~  780 (1082)
                          ..|.||+.+|..
T Consensus       262 ----~~g~~p~dv~de  273 (527)
T KOG0505|consen  262 ----KMGETPLDVADE  273 (527)
T ss_pred             ----hcCCCCccchhh
Confidence                699999999875

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.71  E-value=3.5e-17  Score=192.57  Aligned_cols=237  Identities=15%  Similarity=0.097  Sum_probs=176.1

Q ss_pred             cchhhccCCcHHHHHHHHCCCC-----c------ccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCC
Q 001410          530 CKWSCMFAEVEVPAEVLADGVL-----C------CRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYG  598 (1082)
Q Consensus       530 ~~~ac~fG~veVv~~LLq~Gv~-----~------C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g  598 (1082)
                      ..=||..|+++.++.||+..--     -      -++-.|-.|.|.||.||.+|+  +++..  +++...+-+++.|   
T Consensus         7 l~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~--~~is~--llle~ea~ldl~d---   79 (854)
T KOG0507|consen    7 LIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQ--NQISK--LLLDYEALLDLCD---   79 (854)
T ss_pred             HHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCc--hHHHH--HHhcchhhhhhhh---
Confidence            3458999999999999974311     0      011124468888888888777  56554  2333333334433   


Q ss_pred             CCcchhHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcH
Q 001410          599 SSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLY  678 (1082)
Q Consensus       599 ~~~t~Lhl~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~  678 (1082)
                                                 ..|..++|+|+..++.  +.++.++.++...|..+.   .+.+++|.++..++
T Consensus        80 ---------------------------~kg~~plhlaaw~g~~--e~vkmll~q~d~~na~~~---e~~tplhlaaqhgh  127 (854)
T KOG0507|consen   80 ---------------------------TKGILPLHLAAWNGNL--EIVKMLLLQTDILNAVNI---ENETPLHLAAQHGH  127 (854)
T ss_pred             ---------------------------ccCcceEEehhhcCcc--hHHHHHHhcccCCCcccc---cCcCccchhhhhcc
Confidence                                       4456667777777773  666666655544454442   23466667777777


Q ss_pred             HHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--------ccccCCCCCCHHHHHHHcCCHHHHHH
Q 001410          679 SWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS--------INFRDLSGWTALHWAAYCGREKTVAV  750 (1082)
Q Consensus       679 ~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gad--------vn~~D~~G~TpLH~Aa~~G~~~iV~~  750 (1082)
                      ..++.+|+.+|+++-.+|..+.|+|-+||+.|...+|+.|+.....        -..++..+-+|||+|+.+||.+|++.
T Consensus       128 ~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~  207 (854)
T KOG0507|consen  128 LEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQA  207 (854)
T ss_pred             hHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHH
Confidence            7888889999999999999999999999999999999999876322        23456788999999999999999999


Q ss_pred             HHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHH
Q 001410          751 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI  817 (1082)
Q Consensus       751 LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~  817 (1082)
                      |+++|.++|..+       ..-|+||.|+..|..++|.+|++.|..     ..+++..|.|++.+-.
T Consensus       208 ll~ag~din~~t-------~~gtalheaalcgk~evvr~ll~~gin-----~h~~n~~~qtaldil~  262 (854)
T KOG0507|consen  208 LLEAGFDINYTT-------EDGTALHEAALCGKAEVVRFLLEIGIN-----THIKNQHGQTALDIII  262 (854)
T ss_pred             HHhcCCCccccc-------ccchhhhhHhhcCcchhhhHHHhhccc-----cccccccchHHHHHHH
Confidence            999999999976       467999999999999999999999966     4558888999988643

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.71  E-value=1.5e-16  Score=178.34  Aligned_cols=147  Identities=16%  Similarity=0.060  Sum_probs=121.1

Q ss_pred             HHHHHHHHHhcHHHHHHHHHHCCCCCCccC----CCCCcHHHHHHHcCCHHHHHHHHhCCCCcccc-CCCCCCHHHHHHH
Q 001410          667 QILQKIMKEKLYSWLLRKVCEDGKGPCILD----DEGQGVLHLAASLGYDWAIKPTVTAGVSINFR-DLSGWTALHWAAY  741 (1082)
Q Consensus       667 ~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d----~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~-D~~G~TpLH~Aa~  741 (1082)
                      .++++.+...+...++++|+++|+++|.++    ..|.||||+|+..|+.+++++|+++||++|.+ +..|.||||+|+.
T Consensus        34 ~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~  113 (300)
T PHA02884         34 ANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVL  113 (300)
T ss_pred             CHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHH
Confidence            467777777778889999999999999874    58999999999999999999999999999986 4689999999999


Q ss_pred             cCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHH-HHHH
Q 001410          742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDS-IAKA  820 (1082)
Q Consensus       742 ~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a-~~~~  820 (1082)
                      .|+.+++++|+.+|++++.      +|..|.||||+|+..++..++.++...+          .+..+.+|.+.. ..+.
T Consensus       114 ~~~~eivklLL~~GAdin~------kd~~G~TpL~~A~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~n~ei  177 (300)
T PHA02884        114 HGCLKCLEILLSYGADINI------QTNDMVTPIELALMICNNFLAFMICDNE----------ISNFYKHPKKILINFDI  177 (300)
T ss_pred             cCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHhCChhHHHHhcCCc----------ccccccChhhhhccHHH
Confidence            9999999999999999988      5579999999999999998886665322          233355666543 3466


Q ss_pred             HHHHHHhcC
Q 001410          821 VQTVSEKTA  829 (1082)
Q Consensus       821 v~~Lle~~a  829 (1082)
                      ++.|+.++.
T Consensus       178 ~~~Lish~v  186 (300)
T PHA02884        178 LKILVSHFI  186 (300)
T ss_pred             HHHHHHHHH
Confidence            666666665

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.70  E-value=6.4e-17  Score=204.02  Aligned_cols=190  Identities=15%  Similarity=-0.064  Sum_probs=139.3

Q ss_pred             CCCCccccccHHH-HHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHH---hcHHHHHHHHHHCCCC-----
Q 001410          621 QNHLSEGLCEKQK-LISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKE---KLYSWLLRKVCEDGKG-----  691 (1082)
Q Consensus       621 ~~~~~~~g~t~lh-~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~---~~~~~lv~~Lle~Gad-----  691 (1082)
                      .+..+..|.+||| .|+..++  .+.++.|+..+.    .+   ..+.+++|++..   .+...++..+...+.+     
T Consensus        45 in~~d~~G~t~Lh~~A~~~~~--~eiv~lLl~~g~----~~---~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~~~~  115 (743)
T TIGR00870        45 INCPDRLGRSALFVAAIENEN--LELTELLLNLSC----RG---AVGDTLLHAISLEYVDAVEAILLHLLAAFRKSGPLE  115 (743)
T ss_pred             CCCcCccchhHHHHHHHhcCh--HHHHHHHHhCCC----CC---CcChHHHHHHHhccHHHHHHHHHHHhhcccccCchh
Confidence            3344455688999 5666665  588888886665    11   223455555554   4444566666655532     


Q ss_pred             -CCc----cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccC--------------CCCCCHHHHHHHcCCHHHHHHHH
Q 001410          692 -PCI----LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD--------------LSGWTALHWAAYCGREKTVAVLL  752 (1082)
Q Consensus       692 -~n~----~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D--------------~~G~TpLH~Aa~~G~~~iV~~LL  752 (1082)
                       ++.    .+..|.||||+||..|+.++|++||++|++++.++              ..|.||||+|+..|+.+++++|+
T Consensus       116 ~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl  195 (743)
T TIGR00870       116 LANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLS  195 (743)
T ss_pred             hhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHh
Confidence             111    23569999999999999999999999999999764              36999999999999999999999


Q ss_pred             HcCCCCCCCCCCCCCCCCCCCHHHHHHHcC---------CHHHHHHHHHcCCCcccccC----ccCCCCCCcHHHHHHH-
Q 001410          753 SLGAAPGLLTDPSPEFPLSRTPSDLASSNG---------HKGISGFLAESSLTSLLLSL----KMNDSADDGALEDSIA-  818 (1082)
Q Consensus       753 ~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G---------~~~iv~~LLe~Ga~~~~adl----n~~d~~g~tal~~a~~-  818 (1082)
                      +.|++++.      +|..|+||||+|+..+         ...+.+++++.++..  .+.    ++.|..|.||+++|+. 
T Consensus       196 ~~gadin~------~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~--~~~~el~~i~N~~g~TPL~~A~~~  267 (743)
T TIGR00870       196 EDPADILT------ADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKL--RDSKELEVILNHQGLTPLKLAAKE  267 (743)
T ss_pred             cCCcchhh------HhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhcc--CChHhhhhhcCCCCCCchhhhhhc
Confidence            99999988      5679999999999987         345677777766432  223    6788899999999875 


Q ss_pred             ---HHHHHHHHh
Q 001410          819 ---KAVQTVSEK  827 (1082)
Q Consensus       819 ---~~v~~Lle~  827 (1082)
                         ..++.|++.
T Consensus       268 g~~~l~~lLL~~  279 (743)
T TIGR00870       268 GRIVLFRLKLAI  279 (743)
T ss_pred             CCccHHHHHHHH
Confidence               455556553

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.70  E-value=1.5e-16  Score=164.34  Aligned_cols=136  Identities=15%  Similarity=0.171  Sum_probs=118.3

Q ss_pred             CCCCCCccCCCCCcHHHHHHHcCCH----HHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHH---HHHHHHcCCCCCC
Q 001410          688 DGKGPCILDDEGQGVLHLAASLGYD----WAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT---VAVLLSLGAAPGL  760 (1082)
Q Consensus       688 ~Gad~n~~d~~G~TpLHlAa~~G~~----~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~i---V~~LL~~GAd~n~  760 (1082)
                      +|++++..+..+.++||.||..|+.    +++++|++.|++++.+|..|+||||+||..|+.++   +++|+..|++++.
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~   88 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINA   88 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCC
Confidence            4678888899999999999999998    56678889999999999999999999999998654   8999999999988


Q ss_pred             CCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHH-cCCCcccccCccCCCCCCcHHHHHHH----HHHHHHHHhcCCCCCC
Q 001410          761 LTDPSPEF-PLSRTPSDLASSNGHKGISGFLAE-SSLTSLLLSLKMNDSADDGALEDSIA----KAVQTVSEKTATPAND  834 (1082)
Q Consensus       761 ~~d~~~~D-~~G~TPLhlAa~~G~~~iv~~LLe-~Ga~~~~adln~~d~~g~tal~~a~~----~~v~~Lle~~a~~~a~  834 (1082)
                            +| ..|.||||+|+..|+.+++++|++ .|+     +++.++..|.||+|++..    ..+..|++.++..+..
T Consensus        89 ------~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~ga-----d~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~  157 (166)
T PHA02743         89 ------RELGTGNTLLHIAASTKNYELAEWLCRQLGV-----NLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDP  157 (166)
T ss_pred             ------CCCCCCCcHHHHHHHhCCHHHHHHHHhccCC-----CccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc
Confidence                  44 479999999999999999999995 674     478899999999999874    6778888888776653

>KOG4369 consensus RTK signaling protein MASK/UNC-44 [Signal transduction mechanisms]

Probab=99.69  E-value=5.8e-18  Score=202.07  Aligned_cols=272  Identities=16%  Similarity=0.080  Sum_probs=225.6

Q ss_pred             CCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH-----HHHHHHHHHhCC-CCCCCCccccccHHH
Q 001410          560 VGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-----HLRLERILSMRS-SPQNHLSEGLCEKQK  633 (1082)
Q Consensus       560 ~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl-----~~rlvkLLl~~g-a~~~~~~~~g~t~lh  633 (1082)
                      .=.|+|.+||.+||  -++++  +++..|+++...|+.|  .+++-+     |..+|+.|+... +.....+..+.++|.
T Consensus       756 n~~t~LT~acaggh--~e~ve--llv~rganiehrdkkg--f~plImaatagh~tvV~~llk~ha~veaQsdrtkdt~lS  829 (2131)
T KOG4369|consen  756 NIKTNLTSACAGGH--REEVE--LLVVRGANIEHRDKKG--FVPLIMAATAGHITVVQDLLKAHADVEAQSDRTKDTMLS  829 (2131)
T ss_pred             cccccccccccCcc--HHHHH--HHHHhccccccccccc--chhhhhhcccCchHHHHHHHhhhhhhhhhcccccCceEE
Confidence            34799999999999  77766  6777889999999888  777766     889999999887 667788899999999


Q ss_pred             HHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccC--CCCCcHHHHHHHcCC
Q 001410          634 LISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD--DEGQGVLHLAASLGY  711 (1082)
Q Consensus       634 ~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d--~~G~TpLHlAa~~G~  711 (1082)
                      +++..+.  .++++.||..|++....+   ..+++++.++..+++..+++.|+..|+.+|.+.  +.|-.||++|++.||
T Consensus       830 lacsggr--~~vvelLl~~gankehrn---vsDytPlsla~Sggy~~iI~~llS~GseInSrtgSklgisPLmlatmngh  904 (2131)
T KOG4369|consen  830 LACSGGR--TRVVELLLNAGANKEHRN---VSDYTPLSLARSGGYTKIIHALLSSGSEINSRTGSKLGISPLMLATMNGH  904 (2131)
T ss_pred             EecCCCc--chHHHHHHHhhccccccc---hhhcCchhhhcCcchHHHHHHHhhcccccccccccccCcchhhhhhhccc
Confidence            9999998  599999999998877665   345788999999999999999999999999874  679999999999999


Q ss_pred             HHHHHHHHhCCCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHH
Q 001410          712 DWAIKPTVTAGVSINFR-DLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL  790 (1082)
Q Consensus       712 ~~iv~~LL~~Gadvn~~-D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~L  790 (1082)
                      ...+..||+.|.|||.. ..+-+|+|-+|+..|+.++|.+||.+.+++..+      -+.|.|||+-++..|..++-.+|
T Consensus       905 ~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehR------aktgltplme~AsgGyvdvg~~l  978 (2131)
T KOG4369|consen  905 QAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHR------AKTGLTPLMEMASGGYVDVGNLL  978 (2131)
T ss_pred             cHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhh------cccCCcccchhhcCCccccchhh
Confidence            99999999999999975 456789999999999999999999999998774      47999999999999999999999


Q ss_pred             HHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHHhcCCCCCCCCcccccccccchhhhhhhhh
Q 001410          791 AESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ  855 (1082)
Q Consensus       791 Le~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle~~a~~~a~~~~e~~~~lkdsltav~~Aaq  855 (1082)
                      |.+|++.+.+-+-   +.-.|++-+++.+++...++.+...++    -..+..|.+.|++..|+.
T Consensus       979 i~~gad~nasPvp---~T~dtalti~a~kGh~kfv~~lln~~a----tv~v~NkkG~T~Lwla~~ 1036 (2131)
T KOG4369|consen  979 IAAGADTNASPVP---NTWDTALTIPANKGHTKFVPKLLNGDA----TVRVPNKKGCTVLWLASA 1036 (2131)
T ss_pred             hhcccccccCCCC---CcCCccceeecCCCchhhhHHhhCCcc----ceecccCCCCcccchhcc
Confidence            9999875543221   113466666666666666666655444    345666777777776654

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.69  E-value=3.7e-17  Score=178.95  Aligned_cols=160  Identities=21%  Similarity=0.163  Sum_probs=120.1

Q ss_pred             CCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHH-----HHHHhcHHHHHHHHHHCCCCCCccC
Q 001410          622 NHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQK-----IMKEKLYSWLLRKVCEDGKGPCILD  696 (1082)
Q Consensus       622 ~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~-----~a~~~~~~~lv~~Lle~Gad~n~~d  696 (1082)
                      +..+.+|+|+|||+....++  ++++.|+..|  +...+..+.-++++..     .++......+|..|...| |+|++.
T Consensus       262 NlaDsNGNTALHYsVSHaNF--~VV~~LLDSg--vC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKA  336 (452)
T KOG0514|consen  262 NLADSNGNTALHYAVSHANF--DVVSILLDSG--VCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKA  336 (452)
T ss_pred             hhhcCCCCeeeeeeecccch--HHHHHHhccC--cccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhh
Confidence            44556667777777766665  6666666333  2222222222222221     122233445677777766 888885


Q ss_pred             -CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCCH
Q 001410          697 -DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL-GAAPGLLTDPSPEFPLSRTP  774 (1082)
Q Consensus       697 -~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~-GAd~n~~~d~~~~D~~G~TP  774 (1082)
                       ..|+|+|++|+.+|+.++|+.||..|||||.+|.+|-|+|+.||.+||.+||++||.. ++|+.+      .|.+|.|+
T Consensus       337 sQ~gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sL------tD~DgSTA  410 (452)
T KOG0514|consen  337 SQHGQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISL------TDVDGSTA  410 (452)
T ss_pred             hhhcchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCccccee------ecCCCchh
Confidence             5699999999999999999999999999999999999999999999999999999974 556655      56899999


Q ss_pred             HHHHHHcCCHHHHHHHHH
Q 001410          775 SDLASSNGHKGISGFLAE  792 (1082)
Q Consensus       775 LhlAa~~G~~~iv~~LLe  792 (1082)
                      |.+|...||.+|.-+|-.
T Consensus       411 l~IAleagh~eIa~mlYa  428 (452)
T KOG0514|consen  411 LSIALEAGHREIAVMLYA  428 (452)
T ss_pred             hhhHHhcCchHHHHHHHH
Confidence            999999999999988864

>PHA02741 hypothetical protein; Provisional

Probab=99.69  E-value=1.9e-16  Score=164.02  Aligned_cols=126  Identities=21%  Similarity=0.235  Sum_probs=75.4

Q ss_pred             CccCCCCCcHHHHHHHcCCHHHHHHHHh------CCCCccccCCCCCCHHHHHHHcCC----HHHHHHHHHcCCCCCCCC
Q 001410          693 CILDDEGQGVLHLAASLGYDWAIKPTVT------AGVSINFRDLSGWTALHWAAYCGR----EKTVAVLLSLGAAPGLLT  762 (1082)
Q Consensus       693 n~~d~~G~TpLHlAa~~G~~~iv~~LL~------~Gadvn~~D~~G~TpLH~Aa~~G~----~~iV~~LL~~GAd~n~~~  762 (1082)
                      +.+|..|.||||+||..|+.++++.|+.      .|++++.+|..|+||||+|+..|+    .+++++|+.+|++++.  
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~--   92 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINA--   92 (169)
T ss_pred             hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCC--
Confidence            3455666666666666666666666532      246666666666666666666666    3566666666666655  


Q ss_pred             CCCCCCC-CCCCHHHHHHHcCCHHHHHHHHH-cCCCcccccCccCCCCCCcHHHHHHH----HHHHHHHHhcC
Q 001410          763 DPSPEFP-LSRTPSDLASSNGHKGISGFLAE-SSLTSLLLSLKMNDSADDGALEDSIA----KAVQTVSEKTA  829 (1082)
Q Consensus       763 d~~~~D~-~G~TPLhlAa~~G~~~iv~~LLe-~Ga~~~~adln~~d~~g~tal~~a~~----~~v~~Lle~~a  829 (1082)
                          +|. .|+||||+|+..++.+++++|+. .|+     +++.+|..|.||+++|..    ..++.|.+..+
T Consensus        93 ----~~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~-----~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~  156 (169)
T PHA02741         93 ----QEMLEGDTALHLAAHRRDHDLAEWLCCQPGI-----DLHFCNADNKSPFELAIDNEDVAMMQILREIVA  156 (169)
T ss_pred             ----CCcCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----CCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHH
Confidence                332 56666666666666666666665 353     355566666666666553    44444444443

>PHA02741 hypothetical protein; Provisional

Probab=99.68  E-value=2.1e-16  Score=163.68  Aligned_cols=124  Identities=22%  Similarity=0.158  Sum_probs=107.7

Q ss_pred             HHHHHHHHHhcHHHHHHHHHH------CCCCCCccCCCCCcHHHHHHHcCC----HHHHHHHHhCCCCccccCC-CCCCH
Q 001410          667 QILQKIMKEKLYSWLLRKVCE------DGKGPCILDDEGQGVLHLAASLGY----DWAIKPTVTAGVSINFRDL-SGWTA  735 (1082)
Q Consensus       667 ~~l~~~a~~~~~~~lv~~Lle------~Gad~n~~d~~G~TpLHlAa~~G~----~~iv~~LL~~Gadvn~~D~-~G~Tp  735 (1082)
                      .++++.+...+...+++.|+.      .|++++.+|..|+||||+|+..|+    .+++++|+.+|+++|.+|. .|+||
T Consensus        22 ~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~~g~Tp  101 (169)
T PHA02741         22 ENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEMLEGDTA  101 (169)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcCCCCCH
Confidence            355555666666666776643      368899999999999999999999    5889999999999999995 99999


Q ss_pred             HHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 001410          736 LHWAAYCGREKTVAVLLS-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  796 (1082)
Q Consensus       736 LH~Aa~~G~~~iV~~LL~-~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~  796 (1082)
                      ||+|+..|+.+++++|+. .|++++.      +|..|.||||+|+..|+.+++++|++.++.
T Consensus       102 Lh~A~~~~~~~iv~~Ll~~~g~~~~~------~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741        102 LHLAAHRRDHDLAEWLCCQPGIDLHF------CNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCc------CCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            999999999999999997 5999887      557999999999999999999999998754

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.66  E-value=8.8e-17  Score=170.76  Aligned_cols=147  Identities=21%  Similarity=0.142  Sum_probs=123.6

Q ss_pred             HHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHH
Q 001410          670 QKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA  749 (1082)
Q Consensus       670 ~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~  749 (1082)
                      +..|.+++...+---|-+..-|.|.-|..|.+|||+||..|+..+++.||..|+.+|..+....||||+||..||-++|.
T Consensus         5 f~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivq   84 (448)
T KOG0195|consen    5 FGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQ   84 (448)
T ss_pred             hhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHH
Confidence            34445444332211233445678889999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHHh
Q 001410          750 VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEK  827 (1082)
Q Consensus       750 ~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle~  827 (1082)
                      .||+..+|+|+++      ..|.||||+||.-|...|++-|+..|+.     +++.++.|.||++.|.......|++.
T Consensus        85 kll~~kadvnavn------ehgntplhyacfwgydqiaedli~~ga~-----v~icnk~g~tpldkakp~l~~~l~e~  151 (448)
T KOG0195|consen   85 KLLSRKADVNAVN------EHGNTPLHYACFWGYDQIAEDLISCGAA-----VNICNKKGMTPLDKAKPMLKNTLLEI  151 (448)
T ss_pred             HHHHHhcccchhh------ccCCCchhhhhhhcHHHHHHHHHhccce-----eeecccCCCCchhhhchHHHHHHHHH
Confidence            9999999999976      5999999999999999999999999855     88899999999999875555555443

>KOG0505 consensus Myosin phosphatase, regulatory subunit [Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]

Probab=99.64  E-value=1.2e-15  Score=175.23  Aligned_cols=165  Identities=22%  Similarity=0.261  Sum_probs=112.7

Q ss_pred             HHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 001410          682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL  761 (1082)
Q Consensus       682 v~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~  761 (1082)
                      +..|+..|+++|..+.+|.|+||-||.-.+.+||++|+++|++||..|..||||||-|+.+||..++.+|+.+||++.++
T Consensus        56 v~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~wtPlhaaascg~~~i~~~li~~gA~~~av  135 (527)
T KOG0505|consen   56 VRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGWTPLHAAASCGYLNIVEYLIQHGANLLAV  135 (527)
T ss_pred             HHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccCCcchhhcccccHHHHHHHHHhhhhhhhc
Confidence            45566666666666666666666666666666666666666666666666666666666666666666666666665444


Q ss_pred             C-----------------------------------------------------CCCCCCCCCCCHHHHHHHcCCHHHHH
Q 001410          762 T-----------------------------------------------------DPSPEFPLSRTPSDLASSNGHKGISG  788 (1082)
Q Consensus       762 ~-----------------------------------------------------d~~~~D~~G~TPLhlAa~~G~~~iv~  788 (1082)
                      +                                                     +....+..|-|+||+|+.+|..++++
T Consensus       136 Nsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~rG~T~lHvAaa~Gy~e~~~  215 (527)
T KOG0505|consen  136 NSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHARGATALHVAAANGYTEVAA  215 (527)
T ss_pred             cCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccccchHHHHHHhhhHHHHHH
Confidence            3                                                     01225556999999999999999999


Q ss_pred             HHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHHhcCCCCCCCCcccccccccchhhhhhhhh
Q 001410          789 FLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQ  855 (1082)
Q Consensus       789 ~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle~~a~~~a~~~~e~~~~lkdsltav~~Aaq  855 (1082)
                      +|++.|..     ++++|.+|.||+|.++.-++..+.+.+...++    +.....+.+.+++..+..
T Consensus       216 lLl~ag~~-----~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga----~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  216 LLLQAGYS-----VNIKDYDGWTPLHAAAHWGQEDACELLVEHGA----DMDAKTKMGETPLDVADE  273 (527)
T ss_pred             HHHHhccC-----cccccccCCCcccHHHHhhhHhHHHHHHHhhc----ccchhhhcCCCCccchhh
Confidence            99999955     88899999999999886666555555544444    112233445555555544

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.62  E-value=3.5e-15  Score=167.28  Aligned_cols=123  Identities=13%  Similarity=0.071  Sum_probs=106.1

Q ss_pred             CccCCCCCcH-HHHHHHcCCHHHHHHHHhCCCCccccC----CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCC
Q 001410          693 CILDDEGQGV-LHLAASLGYDWAIKPTVTAGVSINFRD----LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE  767 (1082)
Q Consensus       693 n~~d~~G~Tp-LHlAa~~G~~~iv~~LL~~Gadvn~~D----~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~  767 (1082)
                      -.+|..|.|+ ||.|+..|+.+++++|+++|+++|.++    ..|.||||+|+..|+.+++++|+++||++|..+     
T Consensus        26 ~~~d~~~~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~-----  100 (300)
T PHA02884         26 KKKNKICIANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYA-----  100 (300)
T ss_pred             hccCcCCCCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCccc-----
Confidence            3578888875 566677799999999999999999974    689999999999999999999999999999843     


Q ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHH
Q 001410          768 FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS  825 (1082)
Q Consensus       768 D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Ll  825 (1082)
                      +..|.||||+|+..|+.+++++|++.|+     +++.+|..|.||++.|.......+.
T Consensus       101 ~~~g~TpLh~Aa~~~~~eivklLL~~GA-----din~kd~~G~TpL~~A~~~~~~~~~  153 (300)
T PHA02884        101 EEAKITPLYISVLHGCLKCLEILLSYGA-----DINIQTNDMVTPIELALMICNNFLA  153 (300)
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHhCChhHH
Confidence            2479999999999999999999999995     4888999999999998765444433

>KOG0507 consensus CASK-interacting adaptor protein (caskin) and related proteins with ankyrin repeats and SAM domain [Signal transduction mechanisms]

Probab=99.62  E-value=6.2e-16  Score=182.22  Aligned_cols=221  Identities=19%  Similarity=0.179  Sum_probs=179.2

Q ss_pred             cccchhhccCCcHHHHHHHHCCCCcccCCCCCCCChhHHHHHhcCCcccceeeeeeccCCCCCCcccCCCCCCcchhHH-
Q 001410          528 AKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-  606 (1082)
Q Consensus       528 ~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~csevv~feyl~~~~a~vn~~d~~g~~~t~Lhl-  606 (1082)
                      +.++-||+.|+.+++++|++.-..  +.-++..|.+|||+|+.+|+  .+++...++  .+..+|+...+|  .+++|+ 
T Consensus        51 Talhha~Lng~~~is~llle~ea~--ldl~d~kg~~plhlaaw~g~--~e~vkmll~--q~d~~na~~~e~--~tplhla  122 (854)
T KOG0507|consen   51 TLLHHAVLNGQNQISKLLLDYEAL--LDLCDTKGILPLHLAAWNGN--LEIVKMLLL--QTDILNAVNIEN--ETPLHLA  122 (854)
T ss_pred             hHHHHHHhcCchHHHHHHhcchhh--hhhhhccCcceEEehhhcCc--chHHHHHHh--cccCCCcccccC--cCccchh
Confidence            346799999999999999999887  55556899999999999999  888885444  446677777777  888887 


Q ss_pred             ----HHHHHHHHHhCCCCCCCCccccccHHHHHHHhcccchHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHH
Q 001410          607 ----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLL  682 (1082)
Q Consensus       607 ----~~rlvkLLl~~ga~~~~~~~~g~t~lh~A~~~~~l~~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv  682 (1082)
                          |..++.||+..+++....++.+.+++.+|++++..  ++++.|++...+                          +
T Consensus       123 aqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~--~Vvq~ll~~~~~--------------------------~  174 (854)
T KOG0507|consen  123 AQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRA--EVVQMLLQKKFP--------------------------V  174 (854)
T ss_pred             hhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhh--HHHHHHhhhccc--------------------------h
Confidence                78999999999988888999999999999999994  888888743110                          0


Q ss_pred             HHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 001410          683 RKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT  762 (1082)
Q Consensus       683 ~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~  762 (1082)
                      .++...|  -..++-.+.+|||+|+.+|+.++++.|+++|.++|.....| |+||-|+.+|..+||.+|++.|.+..+  
T Consensus       175 ~~~~~~~--~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~~gin~h~--  249 (854)
T KOG0507|consen  175 QSSLRVG--DIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLEIGINTHI--  249 (854)
T ss_pred             hhcccCC--CCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHhhcccccc--
Confidence            1122233  34577889999999999999999999999999999988776 899999999999999999999999988  


Q ss_pred             CCCCCCCCCCCHHHHHHHcC---CHHHHHHHHHc
Q 001410          763 DPSPEFPLSRTPSDLASSNG---HKGISGFLAES  793 (1082)
Q Consensus       763 d~~~~D~~G~TPLhlAa~~G---~~~iv~~LLe~  793 (1082)
                          +|.+|.|+|.+-...-   ..+++.++...
T Consensus       250 ----~n~~~qtaldil~d~~~~~~~ei~ga~~~~  279 (854)
T KOG0507|consen  250 ----KNQHGQTALDIIIDLQENRRYEIAGAVKNF  279 (854)
T ss_pred             ----ccccchHHHHHHHhcchhhhhhhhhhhhcc
Confidence                5579999998765432   24555555543

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.62  E-value=8.7e-16  Score=156.19  Aligned_cols=97  Identities=19%  Similarity=0.180  Sum_probs=89.1

Q ss_pred             ccCCCCCcHHHHHHHcCCHH---HHHHHHhCCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCC
Q 001410          694 ILDDEGQGVLHLAASLGYDW---AIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLS-LGAAPGLLTDPSPEF  768 (1082)
Q Consensus       694 ~~d~~G~TpLHlAa~~G~~~---iv~~LL~~Gadvn~~D-~~G~TpLH~Aa~~G~~~iV~~LL~-~GAd~n~~~d~~~~D  768 (1082)
                      .+|..|+||||+||..|+.+   ++++|++.|+++|.+| ..|+||||+|+..|+.+++++|+. .|++++.      +|
T Consensus        50 ~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~------~~  123 (154)
T PHA02736         50 EYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEI------LN  123 (154)
T ss_pred             HhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcc------cc
Confidence            46889999999999999874   6889999999999998 599999999999999999999998 5999987      55


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 001410          769 PLSRTPSDLASSNGHKGISGFLAESSLT  796 (1082)
Q Consensus       769 ~~G~TPLhlAa~~G~~~iv~~LLe~Ga~  796 (1082)
                      ..|.||||+|+..|+.+++++|++.|+.
T Consensus       124 ~~g~tpL~~A~~~~~~~i~~~Ll~~ga~  151 (154)
T PHA02736        124 YAFKTPYYVACERHDAKMMNILRAKGAQ  151 (154)
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            7999999999999999999999999965

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.61  E-value=1.8e-15  Score=153.83  Aligned_cols=127  Identities=15%  Similarity=0.144  Sum_probs=101.5

Q ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCC-------CccccCCCCCCHHHHHHHcCCH---HHHHHHHHcCCCCCCC
Q 001410          692 PCILDDEGQGVLHLAASLGYDWAIKPTVTAGV-------SINFRDLSGWTALHWAAYCGRE---KTVAVLLSLGAAPGLL  761 (1082)
Q Consensus       692 ~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Ga-------dvn~~D~~G~TpLH~Aa~~G~~---~iV~~LL~~GAd~n~~  761 (1082)
                      ++.+|..|.||||+||..|+.  +.+++..++       .++.+|..|+||||+|+..|+.   +++++|+..|++++..
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~   87 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK   87 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence            456789999999999999983  344433322       2446799999999999999987   4688999999999884


Q ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCcccccCccCCCCCCcHHHHHHH----HHHHHHHHhcCC
Q 001410          762 TDPSPEFPLSRTPSDLASSNGHKGISGFLAES-SLTSLLLSLKMNDSADDGALEDSIA----KAVQTVSEKTAT  830 (1082)
Q Consensus       762 ~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~-Ga~~~~adln~~d~~g~tal~~a~~----~~v~~Lle~~a~  830 (1082)
                      ++     ..|.||||+|+..|+.+++++|+.. |+     +++.++..|.||+++|..    ..+..|+..++.
T Consensus        88 ~~-----~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~-----d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~  151 (154)
T PHA02736         88 ER-----VFGNTPLHIAVYTQNYELATWLCNQPGV-----NMEILNYAFKTPYYVACERHDAKMMNILRAKGAQ  151 (154)
T ss_pred             CC-----CCCCcHHHHHHHhCCHHHHHHHHhCCCC-----CCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            31     4899999999999999999999974 64     488899999999999885    455666666553

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.57  E-value=1.4e-14  Score=133.26  Aligned_cols=84  Identities=35%  Similarity=0.353  Sum_probs=74.3

Q ss_pred             HHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcC
Q 001410          703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG  782 (1082)
Q Consensus       703 LHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G  782 (1082)
                      ||+||..|+.++++.|++.+++++.    |.||||+||..|+.+++++|++.|++++.      +|..|+||||+|+.+|
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~------~~~~g~t~L~~A~~~~   70 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINS------QDKNGNTALHYAAENG   70 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-------BSTTSSBHHHHHHHTT
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccc------cCCCCCCHHHHHHHcC
Confidence            7999999999999999999988877    88999999999999999999999999887      4578999999999999


Q ss_pred             CHHHHHHHHHcCCC
Q 001410          783 HKGISGFLAESSLT  796 (1082)
Q Consensus       783 ~~~iv~~LLe~Ga~  796 (1082)
                      +.+++++|+++|++
T Consensus        71 ~~~~~~~Ll~~g~~   84 (89)
T PF12796_consen   71 NLEIVKLLLEHGAD   84 (89)
T ss_dssp             HHHHHHHHHHTTT-
T ss_pred             CHHHHHHHHHcCCC
Confidence            99999999998855

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0514 consensus Ankyrin repeat protein [General function prediction only]

Probab=99.54  E-value=2.3e-14  Score=157.24  Aligned_cols=143  Identities=17%  Similarity=0.108  Sum_probs=117.0

Q ss_pred             HHHHHHHhCC-CCCCCCccccccHHHHHHHhc--ccc-hHHHHHHHhhcCCCCccCcCcchhHHHHHHHHHhcHHHHHHH
Q 001410          609 RLERILSMRS-SPQNHLSEGLCEKQKLISKII--QLK-EEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK  684 (1082)
Q Consensus       609 rlvkLLl~~g-a~~~~~~~~g~t~lh~A~~~~--~l~-~e~~~~Ll~~ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~  684 (1082)
                      .+|++|+..+ ++.+..++-|.++..+++...  .-+ ..++..|. ...++|.+...  -+++.+.++...+...+++.
T Consensus       282 ~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF-~mgnVNaKAsQ--~gQTALMLAVSHGr~d~vk~  358 (452)
T KOG0514|consen  282 DVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLF-KMGDVNAKASQ--HGQTALMLAVSHGRVDMVKA  358 (452)
T ss_pred             HHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHH-hccCcchhhhh--hcchhhhhhhhcCcHHHHHH
Confidence            4566666666 666666677777776665322  110 46777777 66677776532  35788899999999999999


Q ss_pred             HHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 001410          685 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVAVLLSL  754 (1082)
Q Consensus       685 Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~-Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~  754 (1082)
                      |+.+|+|+|++|.+|.|+|+.||.+||.+++++||.. ++|+...|.+|-|+|.+|...||.+|.-+|..+
T Consensus       359 LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  359 LLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             HHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence            9999999999999999999999999999999999986 899999999999999999999999999998865

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.53  E-value=2e-14  Score=153.02  Aligned_cols=126  Identities=18%  Similarity=0.138  Sum_probs=109.3

Q ss_pred             hhHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCC
Q 001410          665 KYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR  744 (1082)
Q Consensus       665 ~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~  744 (1082)
                      -+..++|+++..++..+++.|+.+|+.+|..+....||||+||..||.++|+.||+..+|+|+.+..|.|||||||..|.
T Consensus        33 hgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhyacfwgy  112 (448)
T KOG0195|consen   33 HGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYACFWGY  112 (448)
T ss_pred             cCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhhhhhcH
Confidence            34577888888899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 001410          745 EKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  796 (1082)
Q Consensus       745 ~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~  796 (1082)
                      ..+++-|+..||.+++.      ++.|.|||..|.-.-...+.++--+.|-.
T Consensus       113 dqiaedli~~ga~v~ic------nk~g~tpldkakp~l~~~l~e~aek~gq~  158 (448)
T KOG0195|consen  113 DQIAEDLISCGAAVNIC------NKKGMTPLDKAKPMLKNTLLEIAEKHGQS  158 (448)
T ss_pred             HHHHHHHHhccceeeec------ccCCCCchhhhchHHHHHHHHHHHHhCCC
Confidence            99999999999999994      47999999988543333333333345544

>KOG0512 consensus Fetal globin-inducing factor (contains ankyrin repeats) [Transcription]

Probab=99.51  E-value=5.9e-14  Score=140.44  Aligned_cols=105  Identities=24%  Similarity=0.192  Sum_probs=96.5

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCC-ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 001410          702 VLHLAASLGYDWAIKPTVTAGVS-INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  780 (1082)
Q Consensus       702 pLHlAa~~G~~~iv~~LL~~Gad-vn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~  780 (1082)
                      .+-+|+..+....|+.||+..++ +|.+|.+|+||||-|+++||.+||..|+..||++++++      ..||||||-||.
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T------~~GWTPLhSAck  139 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKT------NEGWTPLHSACK  139 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCccccc------ccCccchhhhhc
Confidence            45689999999999999998774 89999999999999999999999999999999999977      599999999999


Q ss_pred             cCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHH
Q 001410          781 NGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI  817 (1082)
Q Consensus       781 ~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~  817 (1082)
                      -++.+|+.+||++|+     |+|.......||||+++
T Consensus       140 WnN~~va~~LLqhga-----DVnA~t~g~ltpLhlaa  171 (228)
T KOG0512|consen  140 WNNFEVAGRLLQHGA-----DVNAQTKGLLTPLHLAA  171 (228)
T ss_pred             ccchhHHHHHHhccC-----cccccccccchhhHHhh
Confidence            999999999999884     58888887899999976

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.50  E-value=1.2e-13  Score=127.11  Aligned_cols=87  Identities=32%  Similarity=0.349  Sum_probs=79.4

Q ss_pred             HHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHH
Q 001410          671 KIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAV  750 (1082)
Q Consensus       671 ~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~  750 (1082)
                      +.+...+...+++.|++.+.+++.    |.||||+||..|+.+++++|++.|++++.+|..|+||||+|+..|+.+++++
T Consensus         2 ~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~   77 (89)
T PF12796_consen    2 HIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVKL   77 (89)
T ss_dssp             HHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHHH
T ss_pred             HHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHHH
Confidence            556677778889999999988886    9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHcCCCCCCC
Q 001410          751 LLSLGAAPGLL  761 (1082)
Q Consensus       751 LL~~GAd~n~~  761 (1082)
                      |+++|++++.+
T Consensus        78 Ll~~g~~~~~~   88 (89)
T PF12796_consen   78 LLEHGADVNIR   88 (89)
T ss_dssp             HHHTTT-TTSS
T ss_pred             HHHcCCCCCCc
Confidence            99999999873

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.46  E-value=1.1e-12  Score=125.05  Aligned_cols=121  Identities=29%  Similarity=0.324  Sum_probs=96.3

Q ss_pred             ccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCC
Q 001410          694 ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRT  773 (1082)
Q Consensus       694 ~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~T  773 (1082)
                      .+|..|.||||+|+..|+.++++.|+..|++++.++..|.||||+|+..+..+++++|+..|++++.      .+..|.|
T Consensus         2 ~~~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~------~~~~~~~   75 (126)
T cd00204           2 ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA------RDKDGNT   75 (126)
T ss_pred             CcCcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccc------cCCCCCC
Confidence            3567788888888888888888888888888888888888888888888888888888888876665      4467888


Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHH
Q 001410          774 PSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS  825 (1082)
Q Consensus       774 PLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Ll  825 (1082)
                      |+|+|+..++.+++++|+..|.     +++..+..+.||++.+.......++
T Consensus        76 ~l~~a~~~~~~~~~~~L~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~  122 (126)
T cd00204          76 PLHLAARNGNLDVVKLLLKHGA-----DVNARDKDGRTPLHLAAKNGHLEVV  122 (126)
T ss_pred             HHHHHHHcCcHHHHHHHHHcCC-----CCcccCCCCCCHHHHHHhcCCHHHH
Confidence            8888888888888888888773     3666777788888887655443333

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.40  E-value=1.9e-12  Score=136.05  Aligned_cols=122  Identities=30%  Similarity=0.340  Sum_probs=109.1

Q ss_pred             HHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC-----HHHHHHHHhCCC---CccccCCCCCCHHHH
Q 001410          667 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGY-----DWAIKPTVTAGV---SINFRDLSGWTALHW  738 (1082)
Q Consensus       667 ~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~-----~~iv~~LL~~Ga---dvn~~D~~G~TpLH~  738 (1082)
                      ....+.+...+...++..++..|++++.+|..|.||||+|+..|+     .++++.||+.|+   +.+.+|..|+||||+
T Consensus        74 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~~  153 (235)
T COG0666          74 RLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLHW  153 (235)
T ss_pred             cCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhHH
Confidence            345555555566666788999999999999999999999999999     999999999999   666679999999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Q 001410          739 AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESS  794 (1082)
Q Consensus       739 Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~G  794 (1082)
                      |+..|+.+++.+|+..|++++.      ++..|.||+++|+..|+..++..|+..+
T Consensus       154 A~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         154 AALNGDADIVELLLEAGADPNS------RNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             HHHcCchHHHHHHHhcCCCCcc------cccCCCcchhhhcccchHHHHHHHHhcC
Confidence            9999999999999999999988      4579999999999999999999999876

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.38  E-value=1.7e-12  Score=117.74  Aligned_cols=112  Identities=21%  Similarity=0.233  Sum_probs=90.4

Q ss_pred             HHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHc
Q 001410          702 VLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSN  781 (1082)
Q Consensus       702 pLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~  781 (1082)
                      -+.|+..+|..+-|+-.+..|.++|..- .|+||||+||-+|..+++++|+..||+++.      +|+.|-|||-.|+..
T Consensus         5 ~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~------kDKygITPLLsAvwE   77 (117)
T KOG4214|consen    5 SVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQD------KDKYGITPLLSAVWE   77 (117)
T ss_pred             hHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCC------ccccCCcHHHHHHHH
Confidence            4678888899999988888888888665 889999999999999999999999999887      668999999999999


Q ss_pred             CCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHH
Q 001410          782 GHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS  825 (1082)
Q Consensus       782 G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Ll  825 (1082)
                      ||..||++||..|++     -+++..+|.+.++.+-.+.++.|+
T Consensus        78 GH~~cVklLL~~GAd-----rt~~~PdG~~~~eate~edIr~LL  116 (117)
T KOG4214|consen   78 GHRDCVKLLLQNGAD-----RTIHAPDGTALIEATEEEDIRELL  116 (117)
T ss_pred             hhHHHHHHHHHcCcc-----cceeCCCchhHHhhccHHHHHHHh
Confidence            999999999988865     555666676666665555555443

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.38  E-value=5.7e-12  Score=120.18  Aligned_cols=119  Identities=30%  Similarity=0.328  Sum_probs=107.1

Q ss_pred             HHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHH
Q 001410          667 QILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK  746 (1082)
Q Consensus       667 ~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~  746 (1082)
                      .++++.+...+...+++.|++.|.+.+..+..|.||||+|+..+..++++.|+..|++++..+..|.||+|+|+..++.+
T Consensus         8 ~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~~~~~~   87 (126)
T cd00204           8 RTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLD   87 (126)
T ss_pred             CCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCcHH
Confidence            35555555666668889999999988899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001410          747 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLA  791 (1082)
Q Consensus       747 iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LL  791 (1082)
                      ++++|+..|.+++.      .|..|.||+++|...++.+++++|+
T Consensus        88 ~~~~L~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          88 VVKLLLKHGADVNA------RDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             HHHHHHHcCCCCcc------cCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            99999999977766      5578999999999999999999884

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown]

Probab=99.36  E-value=5.8e-13  Score=163.30  Aligned_cols=318  Identities=16%  Similarity=0.104  Sum_probs=182.0

Q ss_pred             CCCccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCCCCCC
Q 001410          691 GPCILDDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVAVLL-SLGAAPGLLTDPSPEF  768 (1082)
Q Consensus       691 d~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~-Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL-~~GAd~n~~~d~~~~D  768 (1082)
                      ......-.|+|.||+++..++.|+++.+++- |-..+..|.+|.-.+|++| .++.+++-+|+ -.|..+++      +|
T Consensus       566 ~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca-~lg~ewA~ll~~~~~~ai~i------~D  638 (975)
T KOG0520|consen  566 LSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCA-ALGYEWAFLPISADGVAIDI------RD  638 (975)
T ss_pred             ccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhh-hcCCceeEEEEeeccccccc------cc
Confidence            3445667899999999999999999999986 7777888889999999954 55555555554 46777777      66


Q ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-ccCccCCCCCCcHHHHHHHHHHHHHHHhcCCCCCCCCccccccccc--
Q 001410          769 PLSRTPSDLASSNGHKGISGFLAESSLTSLL-LSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKD--  845 (1082)
Q Consensus       769 ~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~-adln~~d~~g~tal~~a~~~~v~~Lle~~a~~~a~~~~e~~~~lkd--  845 (1082)
                      ..|+||||||+..|+..++..|++.|+.+.+ .+.+-....|.|+..++...++.-+..+++..--. .....+.+.+  
T Consensus       639 ~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~~L~-~~~~~~~~~~~~  717 (975)
T KOG0520|consen  639 RNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEKALS-AHLSNLELADPN  717 (975)
T ss_pred             CCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhhHHH-HHHhhccccccc
Confidence            7999999999999999999999999987663 24444455688998887755544443333211000 0000000000  


Q ss_pred             --chhhhhhhhhh--------------------h--HHHHHHHhhhhHHHHHHHHhhhhhccchhhHHHHHHhhhcCCCc
Q 001410          846 --SLTAICNATQA--------------------A--DRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQ  901 (1082)
Q Consensus       846 --sltav~~Aaqa--------------------a--arIq~afR~~s~~rk~~~~~~de~~~~de~a~sl~A~k~~k~~~  901 (1082)
                        .-++...|.+.                    |  ..-++|.|.+..-+-+.....        ++..+....    -.
T Consensus       718 ~s~~~~~~~~~~t~~e~s~~~~~~~~sl~Dtl~avrdAa~aa~r~q~vfr~~~~~~~--------~a~~i~~~~----~~  785 (975)
T KOG0520|consen  718 LSADSEEDKAEKTSSEGSPNPDEDSDSLKDTLAAVRDAAQAAARIQAVFRAQSFQKK--------QAREIMDAT----KE  785 (975)
T ss_pred             cCCCchhhhhhhccCCCCCCCCccccccccccccccchHHHHHhhhhhhhhhhhhhh--------hHHHHHhhc----ch
Confidence              00000000000                    0  001111111111000000000        000000000    00


Q ss_pred             chHHHHHHHHHHHHHhhhHHHHHHHHhhcCeEeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhcc
Q 001410          902 GDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGFRRDAL  981 (1082)
Q Consensus       902 r~~~l~~Aa~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~~R~~~~rr~~lRg~~~~~~  981 (1082)
                      +........+.++..++++..|.    .-.++..||.++|||+.|+.|..+++-+++||+.+|++..|+.+..--..   
T Consensus       786 ~i~~~~~~~m~~~~a~~~~~~r~----~~~aa~~iq~~f~~yk~r~~~l~tr~p~v~iqa~~rg~q~r~dy~ki~wS---  858 (975)
T KOG0520|consen  786 QISEELAVSMKASSAFSMCDDRS----DPAAASRIQKKFRGYKQRKEFLSTRQPIVKIQAAVRGYQVRKDYRKITWS---  858 (975)
T ss_pred             hhhhhhhhhhhcccchhcCcccc----chhHHHHhhhhhhhHHhhhhhcccCCccccchhhhhchhHhhhhheechh---
Confidence            01111223333333333222211    12478899999999999999999999999999999999988764322111   


Q ss_pred             CCCCCCCCCCCCcchHHHHHHHHHHH----------HHHHHHHHHHHHHhhccHHHH--HHHHHHHHHHHHHHHhh
Q 001410          982 GMNPNPQHMPLKEDDYDFLKDGRKQT----------EERLQKALGRVKSMVQYPEAR--AQYRRLLTVVEGSRETK 1045 (1082)
Q Consensus       982 ~~~~~~~~~~~~~~e~~~lk~~rkq~----------e~r~~~a~~riqs~~R~~~AR--~~y~rl~~~~~~~q~~~ 1045 (1082)
                                ..+-|.-+++.+++++          .+.-+.|.+.++...|.++.-  +-|+||-+++..+|..=
T Consensus       859 ----------v~~lek~~lrwR~k~~g~Rgfk~~~~~e~~~~a~t~~e~~yd~yKq~~~~~~~r~~~A~~~VQsm~  924 (975)
T KOG0520|consen  859 ----------VGVLEKLILRWRRKGKGFRGFKGRALFEEQETAATVIEDCYDFYKQLRKQTEERLTRAVVRVQSMF  924 (975)
T ss_pred             ----------hhHHHHHHHHHHHhhhhhcccccccchhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence                      1122233344334432          222334667778787777666  66888877777766543

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.31  E-value=3.3e-11  Score=126.60  Aligned_cols=128  Identities=27%  Similarity=0.251  Sum_probs=111.1

Q ss_pred             CCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCC-----HHHHHHHHHcCC--CCCCCCC
Q 001410          691 GPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGR-----EKTVAVLLSLGA--APGLLTD  763 (1082)
Q Consensus       691 d~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~-----~~iV~~LL~~GA--d~n~~~d  763 (1082)
                      .....+..+.+++|.++..+...++.+|+..|++++.+|..|.||||+|+..|+     .+++++||..|+  ++..   
T Consensus        65 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~---  141 (235)
T COG0666          65 HLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNN---  141 (235)
T ss_pred             ccccCCccccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCcc---
Confidence            344567789999999999999999999999999999999999999999999999     999999999999  3333   


Q ss_pred             CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHHhc
Q 001410          764 PSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKT  828 (1082)
Q Consensus       764 ~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle~~  828 (1082)
                        .+|..|.||||+|+..|+.+++++|++.|++     ++..+..|.|+++.+.......+....
T Consensus       142 --~~~~~g~tpl~~A~~~~~~~~~~~ll~~~~~-----~~~~~~~g~t~l~~a~~~~~~~~~~~l  199 (235)
T COG0666         142 --LRDEDGNTPLHWAALNGDADIVELLLEAGAD-----PNSRNSYGVTALDPAAKNGRIELVKLL  199 (235)
T ss_pred             --ccCCCCCchhHHHHHcCchHHHHHHHhcCCC-----CcccccCCCcchhhhcccchHHHHHHH
Confidence              2578999999999999999999999999855     777788899999998765555554444

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.30  E-value=5.7e-12  Score=143.29  Aligned_cols=120  Identities=26%  Similarity=0.235  Sum_probs=105.6

Q ss_pred             HHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHH
Q 001410          668 ILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT  747 (1082)
Q Consensus       668 ~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~i  747 (1082)
                      .++.-+.-.+...+|+.++..--|+...+..|-|+||-|+..||.+||++||+.|+|||+.|.+||||||+||.++++.+
T Consensus       552 aLLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~  631 (752)
T KOG0515|consen  552 ALLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPM  631 (752)
T ss_pred             HHHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHH
Confidence            44455555677778888888888999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH--HcCCHHHHHHHHH
Q 001410          748 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLAS--SNGHKGISGFLAE  792 (1082)
Q Consensus       748 V~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa--~~G~~~iv~~LLe  792 (1082)
                      ++.|++.||.+-+.+-     .++.||..-+-  ..|..+|.+||..
T Consensus       632 ckqLVe~GaavfAsTl-----SDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  632 CKQLVESGAAVFASTL-----SDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHHhccceEEeeec-----ccccchhhhcchhhhhHHHHHHHHHH
Confidence            9999999999988664     67889988654  4588999999974

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.26  E-value=3.6e-11  Score=144.50  Aligned_cols=162  Identities=19%  Similarity=0.052  Sum_probs=94.1

Q ss_pred             ccccccHHHHHHHhccc-chHHHHHHHhh---cCCCCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCcc-----
Q 001410          625 SEGLCEKQKLISKIIQL-KEEEESYQMVE---ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCIL-----  695 (1082)
Q Consensus       625 ~~~g~t~lh~A~~~~~l-~~e~~~~Ll~~---ga~~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~-----  695 (1082)
                      ...|.|.||.|.-..+- .++.+..|++-   ..++--.+ +...+.+++|.+..+....+|++|++.||||+++     
T Consensus       140 Ga~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~-eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~F  218 (782)
T KOG3676|consen  140 GATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTS-EEYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAF  218 (782)
T ss_pred             cchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhh-HhhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccc
Confidence            45677777777664321 13555555521   11111111 2224455555555555556666666666666643     


Q ss_pred             ---CC---------------CCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Q 001410          696 ---DD---------------EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAA  757 (1082)
Q Consensus       696 ---d~---------------~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd  757 (1082)
                         +.               .|..||-+||..++.+++++|+++|||++++|.+|+|.||..+.+-..++-.++|.+|++
T Consensus       219 F~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~  298 (782)
T KOG3676|consen  219 FCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGAN  298 (782)
T ss_pred             cCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCC
Confidence               11               145566666666666666666666666666666666666666666666666666666666


Q ss_pred             --CCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 001410          758 --PGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAES  793 (1082)
Q Consensus       758 --~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~  793 (1082)
                        ..+      +|..|.|||-+|+..|..++.+.+++.
T Consensus       299 ~l~~v------~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  299 ALEHV------RNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             ccccc------cccCCCChHHHHHHhhhHHHHHHHHHh
Confidence              322      445666666666666666666666665

>KOG3676 consensus Ca2+-permeable cation channel OSM-9 and related channels (OTRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=99.26  E-value=2.5e-11  Score=145.83  Aligned_cols=111  Identities=20%  Similarity=0.164  Sum_probs=77.4

Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCcccc---------CC--------------CCCCHHHHHHHcCCHHHHHHHHH
Q 001410          697 DEGQGVLHLAASLGYDWAIKPTVTAGVSINFR---------DL--------------SGWTALHWAAYCGREKTVAVLLS  753 (1082)
Q Consensus       697 ~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~---------D~--------------~G~TpLH~Aa~~G~~~iV~~LL~  753 (1082)
                      -.|+||||+|..+.+.++|++||+.||||+++         |.              .|..||.+||..+..+|+++|++
T Consensus       182 Y~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~  261 (782)
T KOG3676|consen  182 YYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLA  261 (782)
T ss_pred             hcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHHh
Confidence            35777777777777777777777777777654         11              35667777777777777777777


Q ss_pred             cCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC--cccccCccCCCCCCcHHHHHHH
Q 001410          754 LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT--SLLLSLKMNDSADDGALEDSIA  818 (1082)
Q Consensus       754 ~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~--~~~adln~~d~~g~tal~~a~~  818 (1082)
                      +|||+++      +|..|+|.||..+.+-..++..++++.|+.  .+.     .|+.|-||+.+|+.
T Consensus       262 ~gAd~~a------qDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v-----~N~qgLTPLtLAak  317 (782)
T KOG3676|consen  262 HGADPNA------QDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV-----RNNQGLTPLTLAAK  317 (782)
T ss_pred             cCCCCCc------cccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc-----cccCCCChHHHHHH
Confidence            7777766      556777777777777667777777777777  777     45556677776663

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.24  E-value=2.7e-11  Score=150.73  Aligned_cols=104  Identities=21%  Similarity=0.171  Sum_probs=62.1

Q ss_pred             HhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 001410          675 EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL  754 (1082)
Q Consensus       675 ~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~  754 (1082)
                      ..+...+++.|++.|+++|.+|..|+||||+||..|+.+++++|+++|+++|.+|..|+||||+|+..|+.+++++|+.+
T Consensus        91 ~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~  170 (664)
T PTZ00322         91 ASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLLSRH  170 (664)
T ss_pred             HcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHhC
Confidence            34445556666666666666666666666666666666666666666666666666666666666666666666666665


Q ss_pred             -CCCCCCCCCCCCCCCCCCCHHHHH
Q 001410          755 -GAAPGLLTDPSPEFPLSRTPSDLA  778 (1082)
Q Consensus       755 -GAd~n~~~d~~~~D~~G~TPLhlA  778 (1082)
                       +++.+...++++.+..|.+|+..+
T Consensus       171 ~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        171 SQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             CCcccccCCCCCccccCCCCccchh
Confidence             111111112223566666665543

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.24  E-value=6.6e-12  Score=106.28  Aligned_cols=54  Identities=31%  Similarity=0.391  Sum_probs=19.3

Q ss_pred             HHCC-CCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHH
Q 001410          686 CEDG-KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWA  739 (1082)
Q Consensus       686 le~G-ad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~A  739 (1082)
                      ++.| +++|.+|..|.||||+||..|+.++|++||..|++++.+|..|+||||+|
T Consensus         2 L~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    2 LEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             ----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            3444 55555555555555555555555555555555555555555555555554

>KOG4214 consensus Myotrophin and similar proteins [Transcription]

Probab=99.23  E-value=2.1e-11  Score=110.79  Aligned_cols=97  Identities=22%  Similarity=0.211  Sum_probs=82.7

Q ss_pred             HhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 001410          675 EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL  754 (1082)
Q Consensus       675 ~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~  754 (1082)
                      .++...-|+.....|.++|..- .|+||||+||-.|...++++|+..||+++.+|+.|-|||.-|+..||.+||++||..
T Consensus        11 kNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVklLL~~   89 (117)
T KOG4214|consen   11 KNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKLLLQN   89 (117)
T ss_pred             ccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHHHHHc
Confidence            3444444666677778887544 899999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHH
Q 001410          755 GAAPGLLTDPSPEFPLSRTPSDLA  778 (1082)
Q Consensus       755 GAd~n~~~d~~~~D~~G~TPLhlA  778 (1082)
                      ||+-....      ++|.+.+..+
T Consensus        90 GAdrt~~~------PdG~~~~eat  107 (117)
T KOG4214|consen   90 GADRTIHA------PDGTALIEAT  107 (117)
T ss_pred             CcccceeC------CCchhHHhhc
Confidence            99987643      6887776644

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.22  E-value=9.1e-12  Score=105.42  Aligned_cols=55  Identities=36%  Similarity=0.515  Sum_probs=33.4

Q ss_pred             HHhCC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001410          718 TVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA  778 (1082)
Q Consensus       718 LL~~G-advn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlA  778 (1082)
                      ||++| +++|.+|..|.||||+||.+|+.++|++||..|+++++      +|..|+||||+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~------~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNA------KDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---------TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCC------CcCCCCCHHHhC
Confidence            67888 99999999999999999999999999999999999998      567999999997

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.21  E-value=5.2e-11  Score=127.51  Aligned_cols=104  Identities=23%  Similarity=0.254  Sum_probs=93.6

Q ss_pred             HHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccc-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 001410          683 RKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINF-RDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL  761 (1082)
Q Consensus       683 ~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~-~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~  761 (1082)
                      ..|+..--++|.+|..|+|+|..|+..|+.++|++||+.|+|||. ++..+.||||+||..|+.++.++|++.|+.+..+
T Consensus        29 ~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn~dvcrllldaGa~~~~v  108 (396)
T KOG1710|consen   29 LALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGNQDVCRLLLDAGARMYLV  108 (396)
T ss_pred             HHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCCchHHHHHHhccCccccc
Confidence            345554446899999999999999999999999999999999986 5678999999999999999999999999999986


Q ss_pred             CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001410          762 TDPSPEFPLSRTPSDLASSNGHKGISGFLAE  792 (1082)
Q Consensus       762 ~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe  792 (1082)
                      +      .-|+|+..+|+.-||.+||.++-.
T Consensus       109 N------svgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen  109 N------SVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             c------chhhhHHHHHHHhcchHHHHHHhc
Confidence            6      589999999999999999988743

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.20  E-value=2.6e-11  Score=101.65  Aligned_cols=54  Identities=39%  Similarity=0.441  Sum_probs=35.7

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHH
Q 001410          699 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL  752 (1082)
Q Consensus       699 G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL  752 (1082)
                      |+||||+||..|+.+++++|+++|+++|.+|.+|+||||+|+..|+.+++++||
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            567777777777777777777777777777777777777777777777777765

...

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.18  E-value=7.5e-11  Score=146.83  Aligned_cols=96  Identities=31%  Similarity=0.352  Sum_probs=89.3

Q ss_pred             cHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHH
Q 001410          701 GVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  780 (1082)
Q Consensus       701 TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~  780 (1082)
                      +.||.||..|+.+++++|+..|+++|.+|..|+||||+||..|+.++|++|+++|++++.      +|..|.||||+|+.
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~------~d~~G~TpLh~A~~  157 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTL------LDKDGKTPLELAEE  157 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHH
Confidence            458999999999999999999999999999999999999999999999999999999988      56799999999999


Q ss_pred             cCCHHHHHHHHHc-------CCCcccccC
Q 001410          781 NGHKGISGFLAES-------SLTSLLLSL  802 (1082)
Q Consensus       781 ~G~~~iv~~LLe~-------Ga~~~~adl  802 (1082)
                      .|+.+++++|+++       |++....+.
T Consensus       158 ~g~~~iv~~Ll~~~~~~~~~ga~~~~~~~  186 (664)
T PTZ00322        158 NGFREVVQLLSRHSQCHFELGANAKPDSF  186 (664)
T ss_pred             CCcHHHHHHHHhCCCcccccCCCCCcccc
Confidence            9999999999998       777776443

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.10  E-value=1.5e-10  Score=97.05  Aligned_cols=54  Identities=41%  Similarity=0.540  Sum_probs=45.8

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Q 001410          732 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLA  791 (1082)
Q Consensus       732 G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LL  791 (1082)
                      |+||||+||..|+.+++++|++.|++++.      +|..|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~------~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINA------QDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-------B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHccCHHHHHHHC
Confidence            78999999999999999999999999988      4579999999999999999999996

...

>KOG0515 consensus p53-interacting protein 53BP/ASPP, contains ankyrin and SH3 domains [Cell cycle control, cell division, chromosome partitioning]

Probab=99.07  E-value=2.5e-10  Score=130.15  Aligned_cols=104  Identities=23%  Similarity=0.116  Sum_probs=90.3

Q ss_pred             HHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC
Q 001410          704 HLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH  783 (1082)
Q Consensus       704 HlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~  783 (1082)
                      .=|+..|-+++|+-++..--|+...+..|.||||-|+..||.+||++||.+|+++|+      .|.+||||||+|+.+++
T Consensus       555 LDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa------~DSdGWTPLHCAASCNn  628 (752)
T KOG0515|consen  555 LDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNA------ADSDGWTPLHCAASCNN  628 (752)
T ss_pred             HhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccC------ccCCCCchhhhhhhcCc
Confidence            347888999999999988889999999999999999999999999999999999999      66899999999999999


Q ss_pred             HHHHHHHHHcCCCcccccCccCCCCCCcHHHHHH
Q 001410          784 KGISGFLAESSLTSLLLSLKMNDSADDGALEDSI  817 (1082)
Q Consensus       784 ~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~  817 (1082)
                      ..+++.|++.|+....  .++  .++.||++.|-
T Consensus       629 v~~ckqLVe~GaavfA--sTl--SDmeTa~eKCe  658 (752)
T KOG0515|consen  629 VPMCKQLVESGAAVFA--STL--SDMETAAEKCE  658 (752)
T ss_pred             hHHHHHHHhccceEEe--eec--ccccchhhhcc
Confidence            9999999999976332  222  33677877654

>KOG1710 consensus MYND Zn-finger and ankyrin repeat protein [General function prediction only]

Probab=99.04  E-value=7.8e-10  Score=118.66  Aligned_cols=115  Identities=23%  Similarity=0.195  Sum_probs=101.0

Q ss_pred             CCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001410          699 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA  778 (1082)
Q Consensus       699 G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlA  778 (1082)
                      -..||.-+...|..+....||..--++|.+|..|.|+|..|++.|+.++|++||+.|||+|..     ++..+.||||.|
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~-----qhg~~YTpLmFA   86 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDK-----QHGTLYTPLMFA   86 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcc-----cccccccHHHHH
Confidence            457888888899999988888876679999999999999999999999999999999999985     457899999999


Q ss_pred             HHcCCHHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHH
Q 001410          779 SSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQT  823 (1082)
Q Consensus       779 a~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~  823 (1082)
                      +..|+.++.++|++.|+.     +.+.|.-|.||+..|+--++..
T Consensus        87 ALSGn~dvcrllldaGa~-----~~~vNsvgrTAaqmAAFVG~H~  126 (396)
T KOG1710|consen   87 ALSGNQDVCRLLLDAGAR-----MYLVNSVGRTAAQMAAFVGHHE  126 (396)
T ss_pred             HHcCCchHHHHHHhccCc-----cccccchhhhHHHHHHHhcchH
Confidence            999999999999999966     6667778899999887544433

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.78  E-value=4.6e-08  Score=111.44  Aligned_cols=95  Identities=29%  Similarity=0.319  Sum_probs=86.3

Q ss_pred             CCccCCCCCcH------HHHHHHcCCHHHHHHHHhCCCCccccC-CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC
Q 001410          692 PCILDDEGQGV------LHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP  764 (1082)
Q Consensus       692 ~n~~d~~G~Tp------LHlAa~~G~~~iv~~LL~~Gadvn~~D-~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~  764 (1082)
                      +-.+|.+|.|.      ||..+..|+.+..-.||..||++|+.+ ..|.||||.||..|...-+++|+-+|||+++    
T Consensus       120 ~~~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a----  195 (669)
T KOG0818|consen  120 LPCRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGA----  195 (669)
T ss_pred             CCCCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCC----
Confidence            34567777765      899999999999988999999999887 5799999999999999999999999999998    


Q ss_pred             CCCCCCCCCHHHHHHHcCCHHHHHHHHH
Q 001410          765 SPEFPLSRTPSDLASSNGHKGISGFLAE  792 (1082)
Q Consensus       765 ~~~D~~G~TPLhlAa~~G~~~iv~~LLe  792 (1082)
                        .|.+|.||+.+|-..||.++++.|++
T Consensus       196 --~d~~GmtP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  196 --QDSSGMTPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             --CCCCCCcHHHHHHhcCchHHHHHHHH
Confidence              66899999999999999999998887

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.58  E-value=2.5e-08  Score=118.92  Aligned_cols=83  Identities=29%  Similarity=0.370  Sum_probs=78.2

Q ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCC
Q 001410          692 PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL-SGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL  770 (1082)
Q Consensus       692 ~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~-~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~  770 (1082)
                      .|.+|..|+|+||+|+..|...++++||++|++++.+|. .|+||||-|.++|+++|+-+||.+|+...+      +|++
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i------~Dke  118 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRI------KDKE  118 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEE------eccc
Confidence            678999999999999999999999999999999999995 799999999999999999999999998877      7789


Q ss_pred             CCCHHHHHHH
Q 001410          771 SRTPSDLASS  780 (1082)
Q Consensus       771 G~TPLhlAa~  780 (1082)
                      |..||..-++
T Consensus       119 glsplq~~~r  128 (1267)
T KOG0783|consen  119 GLSPLQFLSR  128 (1267)
T ss_pred             CCCHHHHHhh
Confidence            9999998776

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=98.47  E-value=1.4e-07  Score=107.23  Aligned_cols=94  Identities=28%  Similarity=0.270  Sum_probs=84.9

Q ss_pred             cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCCCCCCC
Q 001410          695 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL-GAAPGLLTDPSPEFPLSRT  773 (1082)
Q Consensus       695 ~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~-GAd~n~~~d~~~~D~~G~T  773 (1082)
                      ++.++.-++++||..|....++.+.-.|.|++.+|.+.+|+||.||..|+++++++||.. +.+++.      +|.+|+|
T Consensus       502 ~~~~~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~------kDRw~rt  575 (622)
T KOG0506|consen  502 RENDTVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDP------KDRWGRT  575 (622)
T ss_pred             ccccchhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCCh------hhccCCC
Confidence            345677889999999999999999999999999999999999999999999999999974 555555      7899999


Q ss_pred             HHHHHHHcCCHHHHHHHHHcC
Q 001410          774 PSDLASSNGHKGISGFLAESS  794 (1082)
Q Consensus       774 PLhlAa~~G~~~iv~~LLe~G  794 (1082)
                      ||+-|...+|.+++++|-+.-
T Consensus       576 PlDdA~~F~h~~v~k~L~~~~  596 (622)
T KOG0506|consen  576 PLDDAKHFKHKEVVKLLEEAQ  596 (622)
T ss_pred             cchHhHhcCcHHHHHHHHHHh
Confidence            999999999999999998764

>PF13606 Ank_3: Ankyrin repeat

Probab=98.35  E-value=4.7e-07  Score=66.81  Aligned_cols=29  Identities=41%  Similarity=0.431  Sum_probs=21.0

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Q 001410          731 SGWTALHWAAYCGREKTVAVLLSLGAAPG  759 (1082)
Q Consensus       731 ~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n  759 (1082)
                      +|+||||+||..|+.++|++||++|+++|
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            46777777777777777777777777765

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=98.35  E-value=6.4e-07  Score=111.14  Aligned_cols=71  Identities=25%  Similarity=0.309  Sum_probs=62.9

Q ss_pred             chHHHHHHHHHHHHHhhhHHHHHHHHhhcCeEeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 001410          902 GDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGL  973 (1082)
Q Consensus       902 r~~~l~~Aa~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~~R~~~~rr~~l  973 (1082)
                      |...+..+++.||+.+|+|..|+.|+.+|++++.||+.+||+.+|+.+. ...|++.||+.+|+|..||++.
T Consensus       668 R~~vl~~~~~~iq~~~r~~~~r~~f~~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~~y~  738 (862)
T KOG0160|consen  668 RSDVLSAAKVLIQRQIRGYLARKKFLQLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRRRYR  738 (862)
T ss_pred             HHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHHHHH
Confidence            4567888999999999999999999999999999999999999998444 5569999999999998877543

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.26  E-value=2.2e-06  Score=99.71  Aligned_cols=85  Identities=21%  Similarity=0.109  Sum_probs=43.8

Q ss_pred             HHHcCCHHHHHHHHhCCCC--cc--ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHc
Q 001410          706 AASLGYDWAIKPTVTAGVS--IN--FRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSN  781 (1082)
Q Consensus       706 Aa~~G~~~iv~~LL~~Gad--vn--~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~  781 (1082)
                      |+.......+-+||.+|..  +|  ..+-+|+||||+||..|++.+.++|+-+|+|+.+      +|..|+|||.+|-..
T Consensus       631 A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~------rda~g~t~l~yar~a  704 (749)
T KOG0705|consen  631 AVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMA------RDAHGRTALFYARQA  704 (749)
T ss_pred             HHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCcccee------cccCCchhhhhHhhc
Confidence            3333344444455555432  11  2334455555555555555555555555555544      334555555555555


Q ss_pred             CCHHHHHHHHHcCCC
Q 001410          782 GHKGISGFLAESSLT  796 (1082)
Q Consensus       782 G~~~iv~~LLe~Ga~  796 (1082)
                      |..+|+.+|+.+|+-
T Consensus       705 ~sqec~d~llq~gcp  719 (749)
T KOG0705|consen  705 GSQECIDVLLQYGCP  719 (749)
T ss_pred             ccHHHHHHHHHcCCC
Confidence            555555555555554

>KOG0783 consensus Uncharacterized conserved protein, contains ankyrin and BTB/POZ domains [Function unknown]

Probab=98.25  E-value=5.2e-07  Score=108.08  Aligned_cols=83  Identities=23%  Similarity=0.179  Sum_probs=76.1

Q ss_pred             ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcc
Q 001410          725 INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKM  804 (1082)
Q Consensus       725 vn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~  804 (1082)
                      +|.+|..|+|+||+|+..|...++++||.+|++++..+.     ..|+||||-|...|+.+|+-+||.+|     +.+.+
T Consensus        45 anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~-----ESG~taLHRaiyyG~idca~lLL~~g-----~SL~i  114 (1267)
T KOG0783|consen   45 ANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDE-----ESGYTALHRAIYYGNIDCASLLLSKG-----RSLRI  114 (1267)
T ss_pred             hhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccc-----cccchHhhHhhhhchHHHHHHHHhcC-----CceEE
Confidence            688999999999999999999999999999999998664     57999999999999999999999999     45889


Q ss_pred             CCCCCCcHHHHHH
Q 001410          805 NDSADDGALEDSI  817 (1082)
Q Consensus       805 ~d~~g~tal~~a~  817 (1082)
                      +|++|..|++.-.
T Consensus       115 ~Dkeglsplq~~~  127 (1267)
T KOG0783|consen  115 KDKEGLSPLQFLS  127 (1267)
T ss_pred             ecccCCCHHHHHh
Confidence            9999999988643

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.24  E-value=1.3e-06  Score=65.72  Aligned_cols=31  Identities=39%  Similarity=0.453  Sum_probs=20.5

Q ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q 001410          731 SGWTALHWAAYCGREKTVAVLLSLGAAPGLL  761 (1082)
Q Consensus       731 ~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~  761 (1082)
                      +|+||||+||..|+.+++++||++|++++++
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~   31 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINAR   31 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCB
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCC
Confidence            3666666666666666666666666666653

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=98.20  E-value=3.8e-06  Score=97.00  Aligned_cols=102  Identities=25%  Similarity=0.307  Sum_probs=92.6

Q ss_pred             HHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCC--ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC
Q 001410          686 CEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS--INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTD  763 (1082)
Q Consensus       686 le~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gad--vn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d  763 (1082)
                      -..|.++-.++.+..|.||+|+..|+-++|++||.+|..  ++..|..|.|+||-||..++-.+..+|++.||....   
T Consensus       886 h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~elld~~de~get~lhkaa~~~~r~vc~~lvdagasl~k---  962 (1004)
T KOG0782|consen  886 HLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSELLDMADETGETALHKAACQRNRAVCQLLVDAGASLRK---  962 (1004)
T ss_pred             HhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHHHHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhhee---
Confidence            345778888999999999999999999999999999864  578899999999999999999999999999998866   


Q ss_pred             CCCCCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 001410          764 PSPEFPLSRTPSDLASSNGHKGISGFLAES  793 (1082)
Q Consensus       764 ~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~  793 (1082)
                         .|..|.||-.-|-..|..+++.||-.+
T Consensus       963 ---td~kg~tp~eraqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  963 ---TDSKGKTPQERAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             ---cccCCCChHHHHHhcCCchHHHHHhhh
Confidence               457999999999999999999999764

>KOG0818 consensus GTPase-activating proteins of the GIT family [Signal transduction mechanisms]

Probab=98.20  E-value=4e-06  Score=96.08  Aligned_cols=85  Identities=18%  Similarity=0.153  Sum_probs=72.8

Q ss_pred             HHHHHHhcHHHHHHHHHHCCCCCCccC-CCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHH
Q 001410          670 QKIMKEKLYSWLLRKVCEDGKGPCILD-DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTV  748 (1082)
Q Consensus       670 ~~~a~~~~~~~lv~~Lle~Gad~n~~d-~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV  748 (1082)
                      ++++...+...+.-.|+..|+++|..+ ..|.||||.||..|...-+++|+-+|||++..|.+|.||+.+|-..||-++.
T Consensus       137 LhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~la  216 (669)
T KOG0818|consen  137 LHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHELA  216 (669)
T ss_pred             HHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchHHH
Confidence            344444444455556888999999987 4699999999999999999999999999999999999999999999999988


Q ss_pred             HHHHHc
Q 001410          749 AVLLSL  754 (1082)
Q Consensus       749 ~~LL~~  754 (1082)
                      +-|++.
T Consensus       217 eRl~e~  222 (669)
T KOG0818|consen  217 ERLVEI  222 (669)
T ss_pred             HHHHHH
Confidence            877764

>KOG0705 consensus GTPase-activating protein Centaurin gamma (contains Ras-like GTPase, PH and ankyrin repeat domains) [Signal transduction mechanisms]

Probab=98.19  E-value=3.1e-06  Score=98.52  Aligned_cols=95  Identities=25%  Similarity=0.243  Sum_probs=75.2

Q ss_pred             hhHHHHHHHHHhcHHHHHHHHHHCCCC--CCc--cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHH
Q 001410          665 KYQILQKIMKEKLYSWLLRKVCEDGKG--PCI--LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA  740 (1082)
Q Consensus       665 ~~~~l~~~a~~~~~~~lv~~Lle~Gad--~n~--~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa  740 (1082)
                      .+.-++.+...... ..+-+|+.+|..  +|.  -+.+|+|+||+||..|+..+.++||.+|+|+-.+|.+|.|||.||-
T Consensus       624 lgqqLl~A~~~~Dl-~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar  702 (749)
T KOG0705|consen  624 LGQQLLRAVAAEDL-QTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYAR  702 (749)
T ss_pred             hHHHHHHHHHHHHH-HHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHh
Confidence            33444444333332 234567788754  332  3567899999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHHcCCCCCC
Q 001410          741 YCGREKTVAVLLSLGAAPGL  760 (1082)
Q Consensus       741 ~~G~~~iV~~LL~~GAd~n~  760 (1082)
                      ..|.-+|+.+||.+|+....
T Consensus       703 ~a~sqec~d~llq~gcp~e~  722 (749)
T KOG0705|consen  703 QAGSQECIDVLLQYGCPDEC  722 (749)
T ss_pred             hcccHHHHHHHHHcCCCccc
Confidence            99999999999999986533

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.16  E-value=2.3e-06  Score=64.38  Aligned_cols=33  Identities=36%  Similarity=0.410  Sum_probs=31.3

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCccccCC
Q 001410          698 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL  730 (1082)
Q Consensus       698 ~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~  730 (1082)
                      +|+||||+||..|+.+++++||++|++++.+|+
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~   33 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARDN   33 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBCT
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCCC
Confidence            589999999999999999999999999999874

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF13606 Ank_3: Ankyrin repeat

Probab=98.14  E-value=2.4e-06  Score=63.09  Aligned_cols=30  Identities=37%  Similarity=0.381  Sum_probs=28.4

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCccc
Q 001410          698 EGQGVLHLAASLGYDWAIKPTVTAGVSINF  727 (1082)
Q Consensus       698 ~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~  727 (1082)
                      +|+||||+||..|+.++|++||++|+|||.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            589999999999999999999999999984

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.13  E-value=4.5e-06  Score=97.06  Aligned_cols=68  Identities=28%  Similarity=0.368  Sum_probs=58.9

Q ss_pred             HCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 001410          687 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL  754 (1082)
Q Consensus       687 e~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~  754 (1082)
                      +.+..++.+|..|.||||+|+..|+...++.|+.+|+++..+|+.||+|||-|+..|+..++..+|.+
T Consensus        43 ~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~i~~vlr~  110 (560)
T KOG0522|consen   43 KVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQIITEVLRH  110 (560)
T ss_pred             hhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHHHHHHHHH
Confidence            34567888899999999999999999999999999999999999999999999999998888777754

>cd01175 IPT_COE IPT domain of the COE family (Col/Olf-1/EBF) of non-basic, helix-loop-helix (HLH)-containing transcription factors

Probab=98.11  E-value=5.4e-07  Score=80.49  Aligned_cols=66  Identities=21%  Similarity=0.310  Sum_probs=58.8

Q ss_pred             EEEeecCCCCCCCCCeEEEEEcccccccccccccchhhccCCcHHHHHHHHCCCCcccCCC-CCCCChhHHHHH
Q 001410          497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP-HAVGRVPFYITC  569 (1082)
Q Consensus       497 sI~d~sP~wa~~~ggtkVlI~G~~~~~~~~~~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~-~~~G~TPLhvA~  569 (1082)
                      .|+.++|.|+++.||++|+|+|..|.+.       +.|+||+..+..+++...+++|.+|| +.+|-+...+.-
T Consensus         2 ~I~ai~P~eG~~tGGt~VtI~GenF~~g-------l~V~FG~~~~w~e~isp~~i~~~tPP~~~pG~V~Vtl~~   68 (85)
T cd01175           2 CIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVVFGTMLVWSELITPHAIRVQTPPRHIPGVVEVTLSY   68 (85)
T ss_pred             cccEecCCCCcccCCeEEEEECCCCCCC-------cEEEECCEeEEEEEeccceEEEecCCCCCCceEEEEEEE
Confidence            5899999999999999999999888776       67999999999999999999999999 999987665544

COE family proteins are all transcription factors and play an important role in variety of developmental processes. Mouse EBF is involved in the regulation of the early stages of B-cell differentiation, Drosophila collier is a regulator of the head patterning, and a related protein in Xenopus is involved in primary neurogenesis. All COE family members have a well conserved DNA binding domain that contains an atypical Zn finger motif. The function of the IPT domain is unknown.

>KOG0522 consensus Ankyrin repeat protein [General function prediction only]

Probab=98.08  E-value=5.9e-06  Score=96.15  Aligned_cols=86  Identities=26%  Similarity=0.261  Sum_probs=73.2

Q ss_pred             cHHHHHHHcCCHHHHHH-H-HhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHH
Q 001410          701 GVLHLAASLGYDWAIKP-T-VTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA  778 (1082)
Q Consensus       701 TpLHlAa~~G~~~iv~~-L-L~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlA  778 (1082)
                      -|||+++.....+-+.. | .+.+..|+.+|..|.||||+|+..|+...++.|+.+||++..      +|..|++|||-|
T Consensus        22 ~~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~------kN~~gWs~L~EA   95 (560)
T KOG0522|consen   22 KPLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSI------KNNEGWSPLHEA   95 (560)
T ss_pred             cccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccc------cccccccHHHHH
Confidence            45999998877665544 3 334678899999999999999999999999999999999988      668999999999


Q ss_pred             HHcCCHHHHHHHHH
Q 001410          779 SSNGHKGISGFLAE  792 (1082)
Q Consensus       779 a~~G~~~iv~~LLe  792 (1082)
                      +..|+..++..++.
T Consensus        96 v~~g~~q~i~~vlr  109 (560)
T KOG0522|consen   96 VSTGNEQIITEVLR  109 (560)
T ss_pred             HHcCCHHHHHHHHH
Confidence            99999987776655

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=97.91  E-value=2.5e-05  Score=93.06  Aligned_cols=67  Identities=16%  Similarity=0.177  Sum_probs=56.3

Q ss_pred             chHHHHHHHHHHHHHhhhHHHHHHHHhhcCeEeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch
Q 001410          902 GDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKGSGLRGF  976 (1082)
Q Consensus       902 r~~~l~~Aa~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~~R~~~~rr~~lRg~  976 (1082)
                      |...+...++.||+.||||.+|.+|+++|+++++|+ |||.       -++++.+..||..+|+|+.+|.+-+.+
T Consensus       691 r~~~l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~-------~K~ks~v~el~~~~rg~k~~r~ygk~~  757 (1001)
T KOG0164|consen  691 RAERLPSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRR-------YKLKSYVQELQRRFRGAKQMRDYGKSI  757 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHH-------HHHHHHHHHHHHHHHhhhhccccCCCC
Confidence            344577789999999999999999999999999999 8883       346678889999999999888665444

>KOG0506 consensus Glutaminase (contains ankyrin repeat) [Amino acid transport and metabolism]

Probab=97.88  E-value=1.2e-05  Score=91.87  Aligned_cols=87  Identities=23%  Similarity=0.111  Sum_probs=75.8

Q ss_pred             HHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHH
Q 001410          669 LQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKT  747 (1082)
Q Consensus       669 l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~-Gadvn~~D~~G~TpLH~Aa~~G~~~i  747 (1082)
                      +.++++ .+....++.+.-.|.|++.+|.+.+|+||.||..|+..++++||+. +++++.+|..|+|||.-|..++|.++
T Consensus       510 ~~~aa~-~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h~~v  588 (622)
T KOG0506|consen  510 VMYAAK-NGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKHKEV  588 (622)
T ss_pred             hhhhhh-cCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCcHHH
Confidence            344444 4455556777778999999999999999999999999999999985 89999999999999999999999999


Q ss_pred             HHHHHHcCC
Q 001410          748 VAVLLSLGA  756 (1082)
Q Consensus       748 V~~LL~~GA  756 (1082)
                      +++|-++-.
T Consensus       589 ~k~L~~~~~  597 (622)
T KOG0506|consen  589 VKLLEEAQY  597 (622)
T ss_pred             HHHHHHHhc
Confidence            999988644

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.86  E-value=4.2e-05  Score=78.91  Aligned_cols=65  Identities=23%  Similarity=0.115  Sum_probs=40.0

Q ss_pred             CCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCC-CCccccCCCCCCHHHHHHHcCCHHHHHHHHHc
Q 001410          690 KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSL  754 (1082)
Q Consensus       690 ad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~G-advn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~  754 (1082)
                      .++|++|..|||+|+.|+..|..+++.+|+.+| +.|...|..|.+++.+|-..|+.++|..|.+.
T Consensus         3 ~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~   68 (223)
T KOG2384|consen    3 GNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEN   68 (223)
T ss_pred             CCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHH
Confidence            455666666666666666666666666666666 55666666666666666666666666666554

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=97.82  E-value=1.6e-05  Score=99.88  Aligned_cols=97  Identities=28%  Similarity=0.335  Sum_probs=85.1

Q ss_pred             CCCCCc--cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC
Q 001410          689 GKGPCI--LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSP  766 (1082)
Q Consensus       689 Gad~n~--~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~  766 (1082)
                      |+.+|.  .-..|.|+||.|+..|..-++++|++.|+++|..|..|.||||.+...|+...+..|++.||++++.     
T Consensus       644 ~~~~n~~~~~~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~-----  718 (785)
T KOG0521|consen  644 GCCENWPVVLCIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAF-----  718 (785)
T ss_pred             hhhhccchhhhcccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhcccccccccc-----
Confidence            444443  3356899999999999999999999999999999999999999999999999999999999999994     


Q ss_pred             CCCCCCCHHHHHHHcCCHHHHHHHH
Q 001410          767 EFPLSRTPSDLASSNGHKGISGFLA  791 (1082)
Q Consensus       767 ~D~~G~TPLhlAa~~G~~~iv~~LL  791 (1082)
                       |..|.+||++|....+.+++-+|.
T Consensus       719 -~~~~~~~l~~a~~~~~~d~~~l~~  742 (785)
T KOG0521|consen  719 -DPDGKLPLDIAMEAANADIVLLLR  742 (785)
T ss_pred             -CccCcchhhHHhhhccccHHHHHh
Confidence             479999999998877777766654

>KOG0782 consensus Predicted diacylglycerol kinase [Signal transduction mechanisms]

Probab=97.68  E-value=5.5e-05  Score=87.73  Aligned_cols=116  Identities=18%  Similarity=0.175  Sum_probs=89.5

Q ss_pred             HHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCC
Q 001410          704 HLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH  783 (1082)
Q Consensus       704 HlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~  783 (1082)
                      .-|+..+..--+.-+-..|.++-.++.+..|-||+|+..|+-++|++||.+|..- +.   ++.|..|.|+||-|+..++
T Consensus       871 l~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~e-ll---d~~de~get~lhkaa~~~~  946 (1004)
T KOG0782|consen  871 LRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSE-LL---DMADETGETALHKAACQRN  946 (1004)
T ss_pred             HHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHH-HH---HHHhhhhhHHHHHHHHhcc
Confidence            3445555443344445578899999999999999999999999999999998642 11   2356799999999999999


Q ss_pred             HHHHHHHHHcCCCcccccCccCCCCCCcHHHHHHHHHHHHHHHhc
Q 001410          784 KGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKT  828 (1082)
Q Consensus       784 ~~iv~~LLe~Ga~~~~adln~~d~~g~tal~~a~~~~v~~Lle~~  828 (1082)
                      ..++.+|++.|+.     +...|..|.||-+-+...+-..|..++
T Consensus       947 r~vc~~lvdagas-----l~ktd~kg~tp~eraqqa~d~dlaayl  986 (1004)
T KOG0782|consen  947 RAVCQLLVDAGAS-----LRKTDSKGKTPQERAQQAGDPDLAAYL  986 (1004)
T ss_pred             hHHHHHHHhcchh-----heecccCCCChHHHHHhcCCchHHHHH
Confidence            9999999999954     777888999998776655444444443

>KOG2384 consensus Major histocompatibility complex protein BAT4, contains G-patch and ankyrin domains [General function prediction only]

Probab=97.58  E-value=0.00012  Score=75.57  Aligned_cols=89  Identities=28%  Similarity=0.241  Sum_probs=73.0

Q ss_pred             CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc
Q 001410          722 GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG-AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLL  800 (1082)
Q Consensus       722 Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~G-Ad~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~a  800 (1082)
                      +.+||.+|..|||||+.||..|..+.|.+|+.+| +.|.+      .|..|.+++.+|-..|+.+++..|.+.-.+.. .
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv------~d~ssldaaqlaek~g~~~fvh~lfe~~~ets-~   74 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGV------TDESSLDAAQLAEKGGAQAFVHSLFENDRETS-H   74 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccc------cccccchHHHHHHhcChHHHHHHHHHHhccCC-C
Confidence            5689999999999999999999999999999999 77877      55799999999999999999999988643322 2


Q ss_pred             cCccCCCCCCcHHHHHH
Q 001410          801 SLKMNDSADDGALEDSI  817 (1082)
Q Consensus       801 dln~~d~~g~tal~~a~  817 (1082)
                      -.|..+.+..+.+++|-
T Consensus        75 p~nss~~e~lfyCE~Cd   91 (223)
T KOG2384|consen   75 PMNSSRDEALFYCEVCD   91 (223)
T ss_pred             cccCCCCCccchhhhhh
Confidence            35555554556666654

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=97.55  E-value=0.00027  Score=86.91  Aligned_cols=121  Identities=21%  Similarity=0.025  Sum_probs=94.1

Q ss_pred             HHHHHhcHHHHHHHHHH-CC---CCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHH
Q 001410          671 KIMKEKLYSWLLRKVCE-DG---KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK  746 (1082)
Q Consensus       671 ~~a~~~~~~~lv~~Lle-~G---ad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~  746 (1082)
                      ..+.+++..-.|+..++ .+   .++|..|.-|+++||+|..+-+.+++++|+.++..+       .-+|.+|...|..+
T Consensus        30 L~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~v~  102 (822)
T KOG3609|consen   30 LLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGSVP  102 (822)
T ss_pred             HHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHHHH
Confidence            34445555555555554 32   478899999999999999999999999999997766       34899999999999


Q ss_pred             HHHHHHHcCCCCC----CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Q 001410          747 TVAVLLSLGAAPG----LLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL  798 (1082)
Q Consensus       747 iV~~LL~~GAd~n----~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~  798 (1082)
                      +|++|+.+-....    ..++..+....+.|||.+||..++.+|+++|+.+|+..+
T Consensus       103 ~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~  158 (822)
T KOG3609|consen  103 LVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIP  158 (822)
T ss_pred             HHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCC
Confidence            9999998743321    112223455678999999999999999999999997643

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.53  E-value=0.00017  Score=80.96  Aligned_cols=86  Identities=27%  Similarity=0.208  Sum_probs=66.8

Q ss_pred             CcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 001410          700 QGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLAS  779 (1082)
Q Consensus       700 ~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa  779 (1082)
                      ..-|..||+.|..+.|+.|++.|++||.+|.....||.+|+.+||+.+|++||+.||-..--+      ..|.-. |+++
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdt------f~G~RC-~Yga  109 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDT------FDGDRC-HYGA  109 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccc------cCcchh-hhhh
Confidence            456889999999999999999999999999999999999999999999999999998664422      344443 4555


Q ss_pred             HcCCHHHHHHHHHcC
Q 001410          780 SNGHKGISGFLAESS  794 (1082)
Q Consensus       780 ~~G~~~iv~~LLe~G  794 (1082)
                      .+  ..|-+.|+...
T Consensus       110 Ln--d~IR~mllsyd  122 (516)
T KOG0511|consen  110 LN--DRIRRMLLSYD  122 (516)
T ss_pred             hh--HHHHHHHHHHH
Confidence            44  34445555543

>KOG0511 consensus Ankyrin repeat protein [General function prediction only]

Probab=97.35  E-value=0.00061  Score=76.58  Aligned_cols=74  Identities=22%  Similarity=0.212  Sum_probs=61.8

Q ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCccCCCCCCcH
Q 001410          733 WTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGA  812 (1082)
Q Consensus       733 ~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa~~G~~~iv~~LLe~Ga~~~~adln~~d~~g~ta  812 (1082)
                      .--|..||+.|..+.|+.|++.|.++|.+      |.....||.+|+..||..+|++||++|+.      -.+|.-...-
T Consensus        37 f~elceacR~GD~d~v~~LVetgvnVN~v------D~fD~spL~lAsLcGHe~vvklLLenGAi------C~rdtf~G~R  104 (516)
T KOG0511|consen   37 FGELCEACRAGDVDRVRYLVETGVNVNAV------DRFDSSPLYLASLCGHEDVVKLLLENGAI------CSRDTFDGDR  104 (516)
T ss_pred             hHHHHHHhhcccHHHHHHHHHhCCCcchh------hcccccHHHHHHHcCcHHHHHHHHHcCCc------ccccccCcch
Confidence            34588999999999999999999999995      47899999999999999999999999975      3344444456


Q ss_pred             HHHHHH
Q 001410          813 LEDSIA  818 (1082)
Q Consensus       813 l~~a~~  818 (1082)
                      +|+++.
T Consensus       105 C~YgaL  110 (516)
T KOG0511|consen  105 CHYGAL  110 (516)
T ss_pred             hhhhhh
Confidence            677663

>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton]

Probab=97.29  E-value=0.00051  Score=86.03  Aligned_cols=65  Identities=25%  Similarity=0.232  Sum_probs=59.1

Q ss_pred             HHHHHHHHHHHHhhhHHHHHHHHhhcCeEeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001410          905 LAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKG  970 (1082)
Q Consensus       905 ~l~~Aa~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~~R~~~~rr  970 (1082)
                      .++.+++.||+.+||++.|+... ...|+|.||+.||++..|++|..++.+++.+|+.+|++..|+
T Consensus       694 ~~r~~~~~~Q~~~rG~~~r~~~~-~~~aai~~q~~~r~~~~r~~y~~~~~~~~~~qs~~r~~~~r~  758 (862)
T KOG0160|consen  694 QLRSAVIIIQAYSRGVLARRETE-REAAAIGIQKECRSYLNRRRYRALIPASITIQSGVRAMLARN  758 (862)
T ss_pred             HHHHHHHHHhhhhhHHHHHHhhH-HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence            56789999999999999998444 667899999999999999999999999999999999998876

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=97.00  E-value=0.00014  Score=49.27  Aligned_cols=19  Identities=47%  Similarity=0.730  Sum_probs=11.7

Q ss_pred             HHHHHHHHHhhhHHHHHHH
Q 001410          908 SAAIQIQKKFRGWKKRKEF  926 (1082)
Q Consensus       908 ~Aa~~IQ~~~Rg~~~Rk~f  926 (1082)
                      .||+.||+.||||++|+.|
T Consensus         2 ~aai~iQ~~~R~~~~Rk~~   20 (21)
T PF00612_consen    2 KAAIIIQSYWRGYLARKRY   20 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhc
Confidence            4566666666666666655

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>KOG0521 consensus Putative GTPase activating proteins (GAPs) [Signal transduction mechanisms]

Probab=96.97  E-value=0.00059  Score=86.01  Aligned_cols=89  Identities=20%  Similarity=0.093  Sum_probs=80.0

Q ss_pred             hHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCH
Q 001410          666 YQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  745 (1082)
Q Consensus       666 ~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa~~G~~  745 (1082)
                      +.+++|.+...+...++++|++.|+++|.+|..|.||||.+...|+...+..|+++|++.++.|.+|.+||++|....+.
T Consensus       656 ~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~~~~  735 (785)
T KOG0521|consen  656 GCSLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEAANA  735 (785)
T ss_pred             ccchhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhhccc
Confidence            35677888888888899999999999999999999999999999999999999999999999999999999999887777


Q ss_pred             HHHHHHHHc
Q 001410          746 KTVAVLLSL  754 (1082)
Q Consensus       746 ~iV~~LL~~  754 (1082)
                      +++-+|...
T Consensus       736 d~~~l~~l~  744 (785)
T KOG0521|consen  736 DIVLLLRLA  744 (785)
T ss_pred             cHHHHHhhh
Confidence            776665543

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=96.89  E-value=0.0047  Score=80.07  Aligned_cols=144  Identities=19%  Similarity=0.116  Sum_probs=71.7

Q ss_pred             chHHHHHHHHHHHHHhhhHHHHHHHHhhcCeEeeehhhhhhHHHHHHHHHHHH--HHHHHHHHHHHHHHHhhcccch---
Q 001410          902 GDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIW--SVGILEKVILRWRRKGSGLRGF---  976 (1082)
Q Consensus       902 r~~~l~~Aa~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~aRk~y~~~r~--aa~~IQ~~~R~~~~rr~~lRg~---  976 (1082)
                      |...++..++.||+.|||+..||+|+...+.+..||..-+|+..|+++..-.|  +++.+|..++....|.......   
T Consensus       740 Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i  819 (1463)
T COG5022         740 RDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACI  819 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHH
Confidence            45568899999999999999999998876554444444444444443322222  4444444443322221100000   


Q ss_pred             -------hhhccCCCC-CCC-CCCCCcchHHHHHHHH-HHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHhh
Q 001410          977 -------RRDALGMNP-NPQ-HMPLKEDDYDFLKDGR-KQTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETK 1045 (1082)
Q Consensus       977 -------~~~~~~~~~-~~~-~~~~~~~e~~~lk~~r-kq~e~r~~~a~~riqs~~R~~~AR~~y~rl~~~~~~~q~~~ 1045 (1082)
                             ..+...... +.. ......-.+.+.+... +.....+.+.++.+|+.+|...|++++..++..++++.+-.
T Consensus       820 ~~lq~~i~~~~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i~~~~~~r~~~a~r~~~e~k~~~~~~~~l~  898 (1463)
T COG5022         820 IKLQKTIKREKKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQRVELAERQLQELKIDVKSISSLK  898 (1463)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence                   000000000 000 0000000001111111 11233555677778888888888888888877776555443

>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K

Probab=96.62  E-value=0.0023  Score=43.25  Aligned_cols=21  Identities=43%  Similarity=0.632  Sum_probs=18.7

Q ss_pred             cCeEeeehhhhhhHHHHHHHH
Q 001410          930 RQRIVKIQAHVRGHQARKKYR  950 (1082)
Q Consensus       930 r~aai~IQa~~Rg~~aRk~y~  950 (1082)
                      ++++|+||++|||+++|++|+
T Consensus         1 ~~aai~iQ~~~R~~~~Rk~~k   21 (21)
T PF00612_consen    1 RKAAIIIQSYWRGYLARKRYK   21 (21)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHHHhcC
Confidence            357899999999999999985

The IQ motif, which can be present in one or more copies, serves as a binding site for different EF-hand proteins including the essential and regulatory myosin light chains, calmodulin (CaM), and CaM-like proteins [, ].Many IQ motifs are protein kinase C (PKC) phosphorylation sites [, ]. Resolution of the 3D structure of scallop myosin has shown that the IQ motif forms a basic amphipathic helix []. Some proteins known to contain an IQ motif are listed below: A number of conventional and unconventional myosins. Neuromodulin (GAP-43). This protein is associated with nerve growth. It is a major component of the motile "growth cones" that form the tips of elongating axons. Neurogranin (NG/p17). Acts as a "third messenger" substrate of protein kinase C-mediated molecular cascades during synaptic development and remodeling. Sperm surface protein Sp17. Ras GTPase-activating-like protein IQGAP1. IQGAP1 contains 4 IQ motifs. This entry covers the entire IQ motif.; GO: 0005515 protein binding; PDB: 2DFS_A 2IX7_C 1OE9_A 1W7J_A 1W7I_A 1KQM_A 1KK7_A 1WDC_A 1DFL_A 1B7T_A ....

>PF01833 TIG: IPT/TIG domain; InterPro: IPR002909 This family consists of a domain that has an immunoglobulin like fold

Probab=96.41  E-value=6.8e-05  Score=67.96  Aligned_cols=83  Identities=19%  Similarity=0.283  Sum_probs=62.8

Q ss_pred             EEEeecCCCCCCCCCeEEEEEcccccccccccccchhhccCCcHHHHH-HHHCCCCcccCCCCCCCChhHHHHHhcCCcc
Q 001410          497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAE-VLADGVLCCRIPPHAVGRVPFYITCSNRLAC  575 (1082)
Q Consensus       497 sI~d~sP~wa~~~ggtkVlI~G~~~~~~~~~~~~~~ac~fG~veVv~~-LLq~Gv~~C~~p~~~~G~TPLhvA~~~g~~c  575 (1082)
                      .|+.++|.|++..||.+|+|.|.+|...    ...+.|.+|+...... .+....+.|..|+...|..++.+...+...+
T Consensus         2 ~I~si~P~~~~~~gg~~ItI~G~~f~~~----~~~~~v~i~~~~~~~~~~~~~~~i~c~~p~~~~~~~~v~v~~~~~~~~   77 (85)
T PF01833_consen    2 VITSISPNSGSISGGTNITITGSNFGSN----SSNISVKIGGSQCTVITVVSSTQITCTSPALPSGNVNVSVTVNGQQIY   77 (85)
T ss_dssp             EEEEEESSEEETTCTSEEEEEEESSESS----STTEEEEETTEEEEEEGEEETTEEEEE--SCSSEEEEEEEEETTSEEE
T ss_pred             EEEEEECCeEecCCCEEEEEEEEeeccc----CCceEEEECCEeeeEEEEECCcEEEEEECCCCCccEEEEEEECCcCeE
Confidence            6899999999999999999999999221    2458899999977777 8899999999999887777766665553434


Q ss_pred             cceeeeee
Q 001410          576 SEVREFDY  583 (1082)
Q Consensus       576 sevv~fey  583 (1082)
                      ++-..|.|
T Consensus        78 ~~~~~F~Y   85 (85)
T PF01833_consen   78 SNNTSFTY   85 (85)
T ss_dssp             EEEEEEEE
T ss_pred             ECCeeeEC
Confidence            45545444

These domains are found in cell surface receptors such as Met and Ron as well as in intracellular transcription factors where it is involved in DNA binding. The Ron tyrosine kinase receptor shares with the members of its subfamily (Met and Sea) a unique functional feature: the control of cell dissociation, motility, and invasion of extracellular matrices (scattering) [].; GO: 0005515 protein binding; PDB: 3HRP_A 1UAD_D 3MLP_E 9CGT_A 3CGT_A 6CGT_A 4CGT_A 1CGT_A 7CGT_A 1CGU_A ....

>cd01179 IPT_plexin_repeat2 Second repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)

Probab=96.10  E-value=0.0008  Score=61.99  Aligned_cols=70  Identities=19%  Similarity=0.315  Sum_probs=53.5

Q ss_pred             EEEeecCCCCCCCCCeEEEEEcccccccccccccchhhccCCcHHHHHHHHCCCCcccCCCCC-CCChhHHHHHhc
Q 001410          497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHA-VGRVPFYITCSN  571 (1082)
Q Consensus       497 sI~d~sP~wa~~~ggtkVlI~G~~~~~~~~~~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~-~G~TPLhvA~~~  571 (1082)
                      .|+.|+|..|+..|||.|+|.|.+|...     ....|++|..+....-.....+.|..|+.. .|..++.+...+
T Consensus         2 ~I~~i~P~~Gp~~GGT~vtI~G~~~~~~-----~~~~V~ig~~~C~~~~~~~~~i~C~tp~~~~~~~~~v~V~~d~   72 (85)
T cd01179           2 SITSLSPSYGPQSGGTRLTITGKHLNAG-----SSVRVTVGGQPCKILSVSSSQIVCLTPPSASPGEAPVKVLIDG   72 (85)
T ss_pred             eeeEEcCCCCCCCCCEEEEEEEECCCCC-----CeEEEEECCeEeeEEEecCCEEEEECCCCCCCceEEEEEEECC
Confidence            6999999999999999999999999764     236789999866554456778899999853 355455554433

Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>PTZ00014 myosin-A; Provisional

Probab=96.09  E-value=0.003  Score=80.42  Aligned_cols=40  Identities=15%  Similarity=0.086  Sum_probs=28.5

Q ss_pred             CeEeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001410          931 QRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKG  970 (1082)
Q Consensus       931 ~aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~~R~~~~rr  970 (1082)
                      ..++.||++|||+++|++|++++.++++||+.+|+|..++
T Consensus       778 ~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~  817 (821)
T PTZ00014        778 PLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIA  817 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            4456677777777777777777777777777777776654

>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton]

Probab=96.06  E-value=0.0054  Score=73.87  Aligned_cols=89  Identities=18%  Similarity=0.157  Sum_probs=59.3

Q ss_pred             hcCeEeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh------hcccchhhhccCCCCCCCCCCCCcchHHHHHH
Q 001410          929 IRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKG------SGLRGFRRDALGMNPNPQHMPLKEDDYDFLKD 1002 (1082)
Q Consensus       929 ~r~aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~~R~~~~rr------~~lRg~~~~~~~~~~~~~~~~~~~~e~~~lk~ 1002 (1082)
                      +..-++.||+.|||+.+|.+|++++.++++|+ ++|+++.|-      +.+|+++.++.-.....=+...          
T Consensus       695 l~~lvtllQK~~RG~~~R~ry~rmka~~~ii~-wyR~~K~ks~v~el~~~~rg~k~~r~ygk~~~WP~pP----------  763 (1001)
T KOG0164|consen  695 LPSLVTLLQKAWRGWLARQRYRRMKASATIIR-WYRRYKLKSYVQELQRRFRGAKQMRDYGKSIRWPAPP----------  763 (1001)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhhccccCCCCCCCCCc----------
Confidence            34567889999999999999999999999999 778775442      3456665554321000000000          


Q ss_pred             HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 001410         1003 GRKQTEERLQKALGRVKSMVQYPEARAQYRRL 1034 (1082)
Q Consensus      1003 ~rkq~e~r~~~a~~riqs~~R~~~AR~~y~rl 1034 (1082)
                            .-++++..+++.|+-.+.|++-.+++
T Consensus       764 ------~~Lr~~~~~L~~lf~rwra~~~~~~i  789 (1001)
T KOG0164|consen  764 ------LVLREFEELLRELFIRWRAWQILKSI  789 (1001)
T ss_pred             ------hHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence                  02346677788888888888777776

>cd00102 IPT Immunoglobulin-like fold, Plexins, Transcription factors (IPT)

Probab=96.04  E-value=0.00089  Score=61.39  Aligned_cols=59  Identities=24%  Similarity=0.313  Sum_probs=48.8

Q ss_pred             EEEeecCCCCCCCCCeEEEEEcccccccccccccchhhcc-CCcHHHHHHHHCCCCcccCCCCCC
Q 001410          497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMF-AEVEVPAEVLADGVLCCRIPPHAV  560 (1082)
Q Consensus       497 sI~d~sP~wa~~~ggtkVlI~G~~~~~~~~~~~~~~ac~f-G~veVv~~LLq~Gv~~C~~p~~~~  560 (1082)
                      .|+.++|.+++..||++|+|.|.+|....     .+.|+| |...+....+....+.|..|+...
T Consensus         2 ~I~~i~P~~g~~~GGt~itI~G~~f~~~~-----~~~v~~~g~~~c~~~~~~~~~i~C~~p~~~~   61 (89)
T cd00102           2 VITSISPSSGPVSGGTEVTITGSNFGSGS-----NLRVTFGGGVPCSVLSVSSTAIVCTTPPYAN   61 (89)
T ss_pred             EEeEEECCcCCCCCCeEEEEEEECCCCCC-----cEEEEEeCCCeEEEEEecCCEEEEECCCCCC
Confidence            68999999999999999999999987652     467999 888666555678889999998554

IPTs are also known as Transcription factor ImmunoGlobin (TIG) domains. They are present in intracellular transcription factors, cell surface receptors (such as plexins and scatter factor receptors), as well as, cyclodextrin glycosyltransferase and similar enzymes. Although they are involved in DNA binding in transcription factors, their function in other proteins is unknown. In these transcription factors, IPTs form homo- or heterodimers with the exception of the nuclear factor of activated Tcells (NFAT) transcription factors which are mainly monomers.

>smart00248 ANK ankyrin repeats

Probab=95.82  E-value=0.014  Score=39.90  Aligned_cols=27  Identities=44%  Similarity=0.495  Sum_probs=16.6

Q ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Q 001410          732 GWTALHWAAYCGREKTVAVLLSLGAAP  758 (1082)
Q Consensus       732 G~TpLH~Aa~~G~~~iV~~LL~~GAd~  758 (1082)
                      |.||||+|+..|+.++++.|+..|.++
T Consensus         2 ~~~~l~~~~~~~~~~~~~~ll~~~~~~   28 (30)
T smart00248        2 GRTPLHLAAENGNLEVVKLLLDKGADI   28 (30)
T ss_pred             CCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            556666666666666666666665544

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PTZ00014 myosin-A; Provisional

Probab=95.75  E-value=0.0077  Score=76.81  Aligned_cols=42  Identities=21%  Similarity=0.253  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHhhhHHHHHHHHhhcCeEeeehhhhhhHHHHHH
Q 001410          907 HSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKK  948 (1082)
Q Consensus       907 ~~Aa~~IQ~~~Rg~~~Rk~f~~~r~aai~IQa~~Rg~~aRk~  948 (1082)
                      ...+..||++||||+.|++|+++++++++||++||+|++++.
T Consensus       777 ~~~~~~iq~~~r~~~~r~~~~~~~~~~~~iQ~~~R~~l~~~~  818 (821)
T PTZ00014        777 EPLVSVLEALILKIKKKRKVRKNIKSLVRIQAHLRRHLVIAE  818 (821)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence            457899999999999999999999999999999999999864

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=95.58  E-value=0.0026  Score=45.36  Aligned_cols=19  Identities=47%  Similarity=0.616  Sum_probs=9.9

Q ss_pred             CeEeeehhhhhhHHHHHHH
Q 001410          931 QRIVKIQAHVRGHQARKKY  949 (1082)
Q Consensus       931 ~aai~IQa~~Rg~~aRk~y  949 (1082)
                      .++++||++|||+.+|++|
T Consensus         4 ~aa~~IQa~~Rg~~~r~~y   22 (26)
T smart00015        4 RAAIIIQAAWRGYLARKRY   22 (26)
T ss_pred             HHHHHHHHHHHHHHHHHhh
Confidence            3445555555555555554

Calmodulin-binding motif.

>KOG3609 consensus Receptor-activated Ca2+-permeable cation channels (STRPC family) [Inorganic ion transport and metabolism; Signal transduction mechanisms]

Probab=95.48  E-value=0.055  Score=67.34  Aligned_cols=121  Identities=13%  Similarity=-0.021  Sum_probs=85.8

Q ss_pred             HHHHHhcccchHHHHHHHhhcCC-CCccCcCcchhHHHHHHHHHhcHHHHHHHHHHCCCCCCccCCCCCcHHHHHHHcCC
Q 001410          633 KLISKIIQLKEEEESYQMVEANP-EKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGY  711 (1082)
Q Consensus       633 h~A~~~~~l~~e~~~~Ll~~ga~-~n~~~~~~~~~~~l~~~a~~~~~~~lv~~Lle~Gad~n~~d~~G~TpLHlAa~~G~  711 (1082)
                      -.++..+..  ..++..++.... ....+..+..+..+.+.+.++-+..++++|++.+..+       .-+|-+|...|+
T Consensus        30 L~a~E~gd~--~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~-------gdALL~aI~~~~  100 (822)
T KOG3609|consen   30 LLAHENGDV--PLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE-------GDALLLAIAVGS  100 (822)
T ss_pred             HHHHHcCCh--HHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc-------chHHHHHHHHHH
Confidence            345555553  444444422222 1222233467778888888888889999999886554       356778899999


Q ss_pred             HHHHHHHHhCCCCc----------cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q 001410          712 DWAIKPTVTAGVSI----------NFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT  762 (1082)
Q Consensus       712 ~~iv~~LL~~Gadv----------n~~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~  762 (1082)
                      ..+|+.++.+-...          ...-.-+.|||.+||..++.+|+++||..|+.+....
T Consensus       101 v~~VE~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~PH  161 (822)
T KOG3609|consen  101 VPLVELLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPIPH  161 (822)
T ss_pred             HHHHHHHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCCCc
Confidence            99999999874322          1223457899999999999999999999999986643

>smart00248 ANK ankyrin repeats

Probab=95.05  E-value=0.034  Score=37.91  Aligned_cols=29  Identities=38%  Similarity=0.461  Sum_probs=26.5

Q ss_pred             CCCcHHHHHHHcCCHHHHHHHHhCCCCcc
Q 001410          698 EGQGVLHLAASLGYDWAIKPTVTAGVSIN  726 (1082)
Q Consensus       698 ~G~TpLHlAa~~G~~~iv~~LL~~Gadvn  726 (1082)
                      .|.||||+|+..|+.++++.|+..|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            47899999999999999999999998765

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.02  E-value=0.28  Score=57.80  Aligned_cols=62  Identities=32%  Similarity=0.313  Sum_probs=44.7

Q ss_pred             HHHHHHHHhCCCCccc------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCCCCCCHHHHHH
Q 001410          712 DWAIKPTVTAGVSINF------RDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLAS  779 (1082)
Q Consensus       712 ~~iv~~LL~~Gadvn~------~D~~G~TpLH~Aa~~G~~~iV~~LL~~GAd~n~~~d~~~~D~~G~TPLhlAa  779 (1082)
                      ...|++|.+++++.|+      .+..--|+||+|+..|..++|.+||..|+|+.+      +|..|.||..++.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~------kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPST------KDGAGRTPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchh------cccCCCCcccccc
Confidence            5567777777776654      344566778888888888888888887777655      5567888877776

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]

Probab=95.02  E-value=0.042  Score=71.31  Aligned_cols=95  Identities=23%  Similarity=0.224  Sum_probs=73.3

Q ss_pred             HHHHHHhhhHHHHHHHHhhc-------CeEeeehhhhhhHHH---HHHH-HHHHHHHHHHHHHHHHHHHHhhcccchhhh
Q 001410          911 IQIQKKFRGWKKRKEFLLIR-------QRIVKIQAHVRGHQA---RKKY-RPIIWSVGILEKVILRWRRKGSGLRGFRRD  979 (1082)
Q Consensus       911 ~~IQ~~~Rg~~~Rk~f~~~r-------~aai~IQa~~Rg~~a---Rk~y-~~~r~aa~~IQ~~~R~~~~rr~~lRg~~~~  979 (1082)
                      .++|+..||+..|..|...-       ..++.||+.|||+..   |..| .....-++.+|+..|+...|+++.|     
T Consensus       539 ~~~qa~~rg~~~r~~~~~~~~fl~~~~P~~~diq~~vr~~~~~~~~~~~~~~~~~evv~~qs~~R~~lsrk~~~~-----  613 (1401)
T KOG2128|consen  539 LRIQASERGFSTRNKFRSRLDFLKKQTPFVVDIQALVRGILQYIPRDVYLDSAKKEVVKFQSLTRGALSRKKYSR-----  613 (1401)
T ss_pred             hhhhhhccccchHHHHHhhhhHHHhcCchHHHHHHHHHHHhhhchHHHHHHHhhHHHHHHHHHHHHHHHHhhHHH-----
Confidence            34599999998887665432       478899999999985   2222 3334488999999999998876654     


Q ss_pred             ccCCCCCCCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Q 001410          980 ALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQYPEARAQYRRL 1034 (1082)
Q Consensus       980 ~~~~~~~~~~~~~~~~e~~~lk~~rkq~e~r~~~a~~riqs~~R~~~AR~~y~rl 1034 (1082)
                                              +.|...+....++++|+..|...+|..|+.+
T Consensus       614 ------------------------~~q~~~~~~~~~i~iqs~~r~f~~r~~y~~L  644 (1401)
T KOG2128|consen  614 ------------------------KLQYFKDNMTKIIKIQSKIRKFPNRKDYKLL  644 (1401)
T ss_pred             ------------------------HHHHHHHhhhhHHHHHHHHHhcccchHHHHH
Confidence                                    4455566678899999999999999999998

>KOG2505 consensus Ankyrin repeat protein [General function prediction only]

Probab=95.02  E-value=0.044  Score=64.23  Aligned_cols=71  Identities=21%  Similarity=0.112  Sum_probs=58.6

Q ss_pred             HHHHHHhcHHHHHHHHHHCCCCCCc------cCCCCCcHHHHHHHcCCHHHHHHHHhCCCCccccCCCCCCHHHHHH
Q 001410          670 QKIMKEKLYSWLLRKVCEDGKGPCI------LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA  740 (1082)
Q Consensus       670 ~~~a~~~~~~~lv~~Lle~Gad~n~------~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadvn~~D~~G~TpLH~Aa  740 (1082)
                      ....+.+.....+..|.+++++.|.      .+..--|+||+|+..|...+|.+||+.|+|+..+|..|.||..+++
T Consensus       395 ~s~lkk~~~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  395 ISRLKKKPEPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             HHHHhccCchhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            3344455556678888888877654      3445679999999999999999999999999999999999999887

>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues

Probab=94.88  E-value=0.028  Score=40.03  Aligned_cols=22  Identities=41%  Similarity=0.590  Sum_probs=19.6

Q ss_pred             HHHHHHHHHHHhhhHHHHHHHH
Q 001410          906 AHSAAIQIQKKFRGWKKRKEFL  927 (1082)
Q Consensus       906 l~~Aa~~IQ~~~Rg~~~Rk~f~  927 (1082)
                      +..+|+.||+.||||+.|+.|.
T Consensus         2 ~~~aa~~IQa~~Rg~~~r~~y~   23 (26)
T smart00015        2 LTRAAIIIQAAWRGYLARKRYK   23 (26)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhh
Confidence            3578999999999999999984

Calmodulin-binding motif.

>cd00603 IPT_PCSR IPT domain of Plexins and Cell Surface Receptors (PCSR) and related proteins

Probab=94.45  E-value=0.0075  Score=55.78  Aligned_cols=59  Identities=20%  Similarity=0.216  Sum_probs=48.3

Q ss_pred             EEEeecCCCCCCCCCeEEEEEcccccccccccccchhhccCCcHHHHHHHHCCCCcccCCCCC
Q 001410          497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHA  559 (1082)
Q Consensus       497 sI~d~sP~wa~~~ggtkVlI~G~~~~~~~~~~~~~~ac~fG~veVv~~LLq~Gv~~C~~p~~~  559 (1082)
                      .|+.|+|.+++..||+.|.|.|.+|....    ....|.||..+....-+....+.|..|+..
T Consensus         2 ~I~~i~P~~g~~~Ggt~vtI~G~~f~~~~----~~~~V~ig~~~C~~~~~~~~~i~C~~p~~~   60 (90)
T cd00603           2 VITSISPSSGPLSGGTRLTITGSNLGSGS----PRVRVTVGGVPCKVLNVSSTEIVCRTPAAA   60 (90)
T ss_pred             eEEEEcCCCCCCCCCeEEEEEEECCCCCC----ceEEEEECCEECcEEecCCCEEEEECCCCC
Confidence            69999999999999999999999987753    246789999866654556778899998843

This subgroup contains IPT domains of plexins, receptors, like the plasminogen-related growth factor receptors, the hepatocyte growth factor-scatter factors, and the macrophage-stimulating receptors and of fibrocystin. Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT_PCSR domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>cd01180 IPT_plexin_repeat1 First repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)

Probab=93.83  E-value=0.012  Score=55.24  Aligned_cols=61  Identities=15%  Similarity=0.211  Sum_probs=44.8

Q ss_pred             EEEeecCCCCCCCCCeEEEEEcccccccccccccchhhccCCcHHHHH---HHHCCCCcccCCCCC
Q 001410          497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAE---VLADGVLCCRIPPHA  559 (1082)
Q Consensus       497 sI~d~sP~wa~~~ggtkVlI~G~~~~~~~~~~~~~~ac~fG~veVv~~---LLq~Gv~~C~~p~~~  559 (1082)
                      .|+.|+|..|+..|||.|+|.|.+|.....  .....++.|..+..-.   -.....+.|..++..
T Consensus         2 ~I~~i~P~~Gp~~GGT~vTI~G~nl~~~~~--~~~~~V~ig~~~C~i~~~~~~~~~~I~C~t~~~~   65 (94)
T cd01180           2 VITEFFPLSGPLEGGTRLTICGSNLGLRKN--DVRHGVRVGGVPCNPEPPEYSSSEKIVCTTGPAG   65 (94)
T ss_pred             eeEEEeCCCCCCCCCEEEEEEEEcCCCCcc--cceeEEEECCEECcccCCCcCcCCEEEEECCCCC
Confidence            699999999999999999999999987531  1235577787743322   234457889888743

Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>cd01181 IPT_plexin_repeat3 Third repeat of the IPT domain of Plexins and Cell Surface Receptors (PCSR)

Probab=92.56  E-value=0.07  Score=50.79  Aligned_cols=58  Identities=24%  Similarity=0.495  Sum_probs=41.4

Q ss_pred             EEEeecCCCCCCCCCeEEEEEcccccccccccccchhhccCCcH-HHHHHHHCCCCcccCCC
Q 001410          497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVE-VPAEVLADGVLCCRIPP  557 (1082)
Q Consensus       497 sI~d~sP~wa~~~ggtkVlI~G~~~~~~~~~~~~~~ac~fG~ve-Vv~~LLq~Gv~~C~~p~  557 (1082)
                      +|++++|.|++..||+.|+|+|.+|.....   -.+.+.+++.. +.-.+.....+.|..|+
T Consensus         2 ~I~~i~P~~g~~SGGt~itV~G~~Lds~q~---p~~~V~~~~~~~~~C~v~s~~~i~C~tP~   60 (99)
T cd01181           2 TITRIEPEWSFLSGGTPITVTGTNLNTVQE---PRIRVKYGGVEKTSCKVRNSTLMTCPAPS   60 (99)
T ss_pred             EEEEeccCCCccCCCEEEEEEeeccCcccc---cEEEEEECCceeccceeCCCCEEEeCCCC
Confidence            699999999999999999999999987541   13566677642 11112345566787776

Plexins are involved in the regulation of cell proliferation and of cellular adhesion and repulsion receptors. In general, there are three copies of the IPT domain present preceeded by SEMA (semaphorin) and PSI (plexin, semaphorin, integrin) domains.

>COG5022 Myosin heavy chain [Cytoskeleton]

Probab=92.49  E-value=0.21  Score=65.59  Aligned_cols=52  Identities=13%  Similarity=0.192  Sum_probs=41.2

Q ss_pred             hHHHHHHHHhhcCeEeeehhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 001410          919 GWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWRRKG  970 (1082)
Q Consensus       919 g~~~Rk~f~~~r~aai~IQa~~Rg~~aRk~y~~~r~aa~~IQ~~~R~~~~rr  970 (1082)
                      +.+.-++=..+...++.||+.|||+..||+|....+....+|...++|+.++
T Consensus       734 ~~LE~~Rd~~~~~~~~~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~  785 (1463)
T COG5022         734 AALEDMRDAKLDNIATRIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRR  785 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhh
Confidence            3344444456677889999999999999999999888888888888776654

>smart00429 IPT ig-like, plexins, transcription factors

Probab=91.71  E-value=0.027  Score=52.01  Aligned_cols=58  Identities=22%  Similarity=0.265  Sum_probs=39.5

Q ss_pred             eEEEeecCCCCCCCCCeEEEEEcccccccccccccchhhccCCcHHHHHHH--HCCCCcccCCCC
Q 001410          496 FSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVL--ADGVLCCRIPPH  558 (1082)
Q Consensus       496 fsI~d~sP~wa~~~ggtkVlI~G~~~~~~~~~~~~~~ac~fG~veVv~~LL--q~Gv~~C~~p~~  558 (1082)
                      ..|+.|+|.+++..||++|+|.|..|.....     ..+.++.-.+...++  ....+.|..|+.
T Consensus         2 P~I~~i~P~~g~~~GGt~iti~G~nf~~~~~-----~~~~~~~~~~~c~~~~~~~~~i~C~tp~~   61 (90)
T smart00429        2 PVITRISPTSGPVSGGTEITLCGKNLDSISV-----VFVEVGVGEAPCTFLPSSSTAIVCKTPPY   61 (90)
T ss_pred             CEEEEEccCcCcCCCCeEEEEeeecCCcceE-----EEEEEEeCCEEeEEeCCcceEEEEECCCC
Confidence            3799999999999999999999999887433     333333311222222  345678888763

>PF08549 SWI-SNF_Ssr4: Fungal domain of unknown function (DUF1750); InterPro: IPR013859 This is a fungal protein of unknown function

Probab=89.87  E-value=0.68  Score=56.91  Aligned_cols=104  Identities=22%  Similarity=0.385  Sum_probs=68.1

Q ss_pred             CChHHHHHHHhcccce-----eecccCCCCCCCCcEEe-ee--hhhhhhhhccCccceecCCCcchHhhhhhcccCCEee
Q 001410           27 LRPAEICEILCNYQKF-----HIASEPPSRPPSGSLFL-FD--RKVLRYFRKDGHNWRKKKDGKTVREAHEKLKVGSVDV   98 (1082)
Q Consensus        27 ~~~~e~~~~l~~~~~~-----~~~~~~~~~p~~g~~~l-~~--r~~~~~~r~dg~~w~~~~~~~~~~e~h~~lk~~~~~~   98 (1082)
                      |..++|+++|..-.+.     .+.-.=-.+|+-|+||| |-  -++.-.|-.|||.|.-       -|.--+..|+|..+
T Consensus        30 l~~~~~~~~Ll~ap~i~r~~~P~~WtylD~P~DGtv~L~wqp~~~lg~~fasDGy~wad-------~E~~y~~~~~G~~l  102 (669)
T PF08549_consen   30 LPPETVVEYLLKAPQIARDTAPFFWTYLDKPPDGTVLLTWQPLNRLGTNFASDGYVWAD-------PEQAYTHEVNGYTL  102 (669)
T ss_pred             CCHHHHHHHHHhchhhhccCCCeEeecccCCCCCcEEEEecCchhcCCcCCCCcceecC-------hhheeeecCCCeEE
Confidence            5666777777654321     01111146789999986 43  2445779999999974       25555666666542


Q ss_pred             --EE---EEeecccCCcccceeeeecccCCC---------CceEEEEeeecCC
Q 001410           99 --LH---CYYAHGEDNENFQRRCYWMLEQDL---------MHIVFVHYLEVQG  137 (1082)
Q Consensus        99 --~~---~~y~~~~~~~~f~rr~y~~~~~~~---------~~ivlvhy~~~~~  137 (1082)
                        .+   .|+-=+|.....-||.|-|+-...         +.++||||---..
T Consensus       103 Ei~~~k~G~~p~~e~~a~h~RrRyRL~~~~~p~pn~P~~DpsLwiVHY~~a~~  155 (669)
T PF08549_consen  103 EIYEHKSGYHPPGEQYASHSRRRYRLVPGKVPNPNAPPPDPSLWIVHYGPAPP  155 (669)
T ss_pred             EEEEeecCcCCCCCchhheeeeeeEecCCCCCCCCCCCCCCcEEEEEecCCCc
Confidence              21   233336888899999999996543         4689999987654

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	1082
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		6e-10
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-09
2cxk_A	95	Crystal Structure Of The Tig Domain Of Human Calmod		4e-08
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-07
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		6e-07
2xee_A	157	Structural Determinants For Improved Thermal Stabil		7e-07
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-06
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-06
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		3e-06
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-06
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		5e-06
1ycs_B	239	P53-53bp2 Complex Length = 239		5e-06
2dfs_A	1080	3-D Structure Of Myosin-V Inhibited State Length =		7e-06
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		7e-06
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		7e-06
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		1e-05
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		2e-05
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		4e-05
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		4e-05
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		5e-05
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		5e-05
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		6e-05
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		6e-05
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		8e-05
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		9e-05
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		1e-04
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		1e-04
1uoh_A	226	Human Gankyrin Length = 226		2e-04
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-04
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		2e-04
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		2e-04
2ix7_C	58	Structure Of Apo-Calmodulin Bound To Unconventional		2e-04
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		4e-04
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		5e-04

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 63.5 bits (153), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/109 (35%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 741
           ++ + E+G  P   D +G+  LH AA  G+   +K  ++ G   N +D  G T LH+AA 
Sbjct: 20  VKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAE 79
Query: 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            G ++ V +LLS GA      DP+ +    RTP   A+ NGHK I   L
Sbjct: 80  NGHKEIVKLLLSKGA------DPNAKDSDGRTPLHYAAENGHKEIVKLL 122

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 57/109 (52%), Gaps = 6/109 (5%)
Query: 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 741
           ++ + E+G      D +G+  LHLAA  G+   +K  ++ G   N +D  G T LH AA 
Sbjct: 20  VKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAE 79
Query: 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            G ++ V +LLS GA      DP+ +    +TP  LA+ NGHK +   L
Sbjct: 80  NGHKEVVKLLLSQGA------DPNAKDSDGKTPLHLAAENGHKEVVKLL 122

>pdb|2CXK|A Chain A, Crystal Structure Of The Tig Domain Of Human Calmodulin- Binding Transcription Activator 1 (Camta1) Length = 95

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-08,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 6/89 (6%)
Query: 498 IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP 557
           + D+SP+W+Y +  ++V++TG +    QE A   +SC+F ++ VPA ++  GVL C  P 
Sbjct: 9   VTDYSPEWSYPEGGVKVLITGPW----QE-ASNNYSCLFDQISVPASLIQPGVLRCYCPA 63
Query: 558 HAVGRVPFYITCSNRLACSEVREFDYIVG 586
           H  G V   +  +N++  + V  F+Y  G
Sbjct: 64  HDTGLVTLQVAFNNQIISNSV-VFEYKSG 91

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-07,   Method: Composition-based stats.
 Identities = 34/88 (38%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD+G   LHLAA +G+   ++  +  G  +N RD  GWT LH AA  G  + V VLL  G
Sbjct: 44  DDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNGHLEIVEVLLKYG 103
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGH 783
           A      D + +     TP  LA+  GH
Sbjct: 104 A------DVNAQDAYGLTPLHLAADRGH 125

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-07,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D +G   LHLAA  G+   ++  + AG  +N +D  G+T LH AA  G  + V VLL  G
Sbjct: 65  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 124
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +    +TP DLA   GH+ I+  L
Sbjct: 125 A------DVNAQDKFGKTPFDLAIREGHEDIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 53.5 bits (127), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 35/95 (36%), Positives = 50/95 (52%), Gaps = 6/95 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D +G   LHLAA  G+   ++  + AG  +N +D  G+T LH AA  G  + V VLL  G
Sbjct: 65  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 124
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +    +TP DLA  NG++ I+  L
Sbjct: 125 A------DVNAQDKFGKTPFDLAIDNGNEDIAEVL 153

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 36/97 (37%), Positives = 49/97 (50%), Gaps = 6/97 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G+  LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  G
Sbjct: 32  DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
           A      D + +    RTP  LA+ NGH  +   L E
Sbjct: 92  A------DVNAKDKNGRTPLHLAARNGHLEVVKLLLE 122

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 741
           ++ + E+G      D +G+  LH AA  G+   +K  ++ G  +N +D  G T LH+AA 
Sbjct: 20  VKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAK 79
Query: 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            G ++ V +L+S GA      D + +    RTP   A+  GHK I   L
Sbjct: 80  EGHKEIVKLLISKGA------DVNAKDSDGRTPLHYAAKEGHKEIVKLL 122

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-06,   Method: Composition-based stats.
 Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 6/94 (6%)
Query: 699 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 758
           G+  LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  GA  
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA-- 59
Query: 759 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
               D + +    RTP  LA+ NGH  +   L E
Sbjct: 60  ----DVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 50.8 bits (120), Expect = 4e-06,   Method: Composition-based stats.
 Identities = 35/109 (32%), Positives = 55/109 (50%), Gaps = 6/109 (5%)
Query: 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 741
           ++ + E+G      D +G+  LH AA  G+   +K  ++ G  +N +D  G T LH AA 
Sbjct: 20  VKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAE 79
Query: 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            G ++ V +L+S GA      D + +    RTP   A+ NGHK +   L
Sbjct: 80  NGHKEVVKLLISKGA------DVNAKDSDGRTPLHHAAENGHKEVVKLL 122

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 681 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 740
           L++++  +   P + +DEG   LH A   G+   +K  V  GV++N  D  GWT LH AA
Sbjct: 52  LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAA 111
Query: 741 YCGREKTVAVLLSLGAAPGLLT 762
            C   +    L+  GAA   +T
Sbjct: 112 SCNNVQVCKFLVESGAAVFAMT 133

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 50.4 bits (119), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 42/82 (51%)
Query: 681 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 740
           L++++  +   P + +DEG   LH A   G+   +K  V  GV++N  D  GWT LH AA
Sbjct: 52  LVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAA 111
Query: 741 YCGREKTVAVLLSLGAAPGLLT 762
            C   +    L+  GAA   +T
Sbjct: 112 SCNNVQVCKFLVESGAAVFAMT 133

>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 897 LRPVQGDGLAHSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR 946
           L  ++ D L  +A I+IQK  RGW  RK+++ +R+  + IQ +VRGHQAR
Sbjct: 759 LEKIRADKL-RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQAR 807

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 741
           +R +  +G     +DD G   LHLAA  G+   ++  +  G  +N RD+ G T LH AA 
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARDIWGRTPLHLAAT 89
Query: 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            G  + V VLL  GA      D + +    +T  D++  NG++ ++  L
Sbjct: 90  VGHLEIVEVLLEYGA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-06,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 697 DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
           D G+ +L  AA  G D  ++  +  G  +N RD +GWT LH AA+ G  + V VLL  GA
Sbjct: 13  DLGKKLLE-AARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGA 71
Query: 757 APGLLTDPSPEFPLSRTPSDLASSNGH 783
                 D + +  L  TP  LA+  GH
Sbjct: 72  ------DVNAKDSLGVTPLHLAARRGH 92

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D+ G   LHLAA  G+   ++  +  G  +N +D  G+T LH AAY G  + V VLL  G
Sbjct: 77  DNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYG 136
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 699 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 758
           G   LH+AA+ GY   +K  + A   +N +D  GWT LH AA+ G+E+   +L+      
Sbjct: 199 GGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE----- 253
Query: 759 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
             L D      + +T  D+A  +    I G+L E
Sbjct: 254 -NLCDMEAVNKVGQTAFDVADED----ILGYLEE 282

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 47.8 bits (112), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 33/87 (37%), Positives = 43/87 (49%), Gaps = 7/87 (8%)
Query: 697 DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
           D G+ +L  AA  G D  ++  +  G  +N  D  GWT LH AAY G  + V VLL  GA
Sbjct: 13  DLGKKLLE-AARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGA 71
Query: 757 APGLLTDPSPEFPLSRTPSDLASSNGH 783
                 D + +  L  TP  LA+  GH
Sbjct: 72  ------DVNADDSLGVTPLHLAADRGH 92

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 43.1 bits (100), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Query: 695 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 754
           LD  G   LHLAA  G+   ++  +  G  +N  D  G T LH AA  G  + V VLL  
Sbjct: 76  LDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKY 135
Query: 755 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA      D + +    +T  D++  NG++ ++  L
Sbjct: 136 GA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 741
           +R +  +G     +DD G   LHLAA  G+   ++  +  G  +N  D+ G T LH AA 
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDIWGRTPLHLAAT 89
Query: 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            G  + V VLL  GA      D + +    +T  D++  NG++ ++  L
Sbjct: 90  VGHLEIVEVLLEYGA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 49/95 (51%), Gaps = 6/95 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D +G   LHLAA  G+   ++  + AG  +N +D  G+T LH AA  G  + V VLL  G
Sbjct: 77  DKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAG 136
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-05,   Method: Composition-based stats.
 Identities = 31/96 (32%), Positives = 50/96 (52%), Gaps = 6/96 (6%)
Query: 695 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 754
           +D  G   LHLAASLG+   ++  +  G  +N +D +G T L+ AAY G  + V VLL  
Sbjct: 64  VDTNGTTPLHLAASLGHLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKH 123
Query: 755 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA      D + +    +T  D++   G++ ++  L
Sbjct: 124 GA------DVNAQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-04,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   LHLAA  G+   ++  +  G  +N +D +G T LH AA  G  + V VLL  G
Sbjct: 77  DTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYG 136
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +    +T  D++ +NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISINNGNEDLAEIL 165

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-05,   Method: Composition-based stats.
 Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 6/109 (5%)
Query: 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 741
           +R +  +G     LD++G   LHLAA LG+   ++  +  G  +N  D  G T LH AA 
Sbjct: 30  VRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAEDNFGITPLHLAAI 89
Query: 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            G  + V VLL  GA      D + +    +T  D++  NG++ ++  L
Sbjct: 90  RGHLEIVEVLLKHGA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 46.2 bits (108), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 6/88 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D++G   LHLAAS G+   ++  +  G  +N  DL+G T LH AA  G  + V VLL  G
Sbjct: 44  DNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATGHLEIVEVLLKHG 103
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGH 783
           A      D +       TP  LA+  GH
Sbjct: 104 A------DVNAYDNDGHTPLHLAAKYGH 125

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 70  DDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129
Query: 756 AAP 758
           A P
Sbjct: 130 ANP 132

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 70  DDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129
Query: 756 AAP 758
           A P
Sbjct: 130 ANP 132

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 70  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129
Query: 756 AAP 758
           A P
Sbjct: 130 ANP 132

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/63 (39%), Positives = 34/63 (53%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 71  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 130
Query: 756 AAP 758
           A P
Sbjct: 131 ANP 133

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY 741
           +R +  +G     +DD G   LHLAA  G+   ++  +  G  +N  D  G T LH AA 
Sbjct: 30  VRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASDSWGRTPLHLAAT 89
Query: 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            G  + V VLL  GA      D + +    +T  D++  NG++ ++  L
Sbjct: 90  VGHLEIVEVLLEYGA------DVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 31/95 (32%), Positives = 47/95 (49%), Gaps = 6/95 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   LHLAA  G+   ++  +  G  +N  D +GWT LH AA  G+ + V VLL  G
Sbjct: 69  DSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHG 128
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +  L  T  D++ + G + ++  L
Sbjct: 129 A------DVNAQDALGLTAFDISINQGQEDLAEIL 157

>pdb|2IX7|C Chain C, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 58

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Composition-based stats.
 Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 908 SAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQAR 946
           +A I+IQK  RGW  RK +L +++  + +Q +VRG+QAR
Sbjct: 6   AACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQAR 44

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   LHLAA  G+   ++  +  G  +N  D  G+T LH AA  G  + V VLL  G
Sbjct: 77  DKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYG 136
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   LHLAA  G+   ++  +  G  +N  D  G+T LH AA  G  + V VLL  G
Sbjct: 77  DKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYG 136
Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 137 A------DVNAQDKFGKTAFDISIDNGNEDLAEIL 165

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	1082
2cxk_A	95	Camta1, calmodulin binding transcription activator	1e-31
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	2e-18
2ix7_C	58	Myosin-5A; contractIle protein/metal binding, acti	4e-04
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	5e-13
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	8e-11
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-06
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-06
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-13
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-10
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	6e-09
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-13
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	8e-11
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	9e-10
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-12
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-10
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-09
3v30_A	172	DNA-binding protein rfxank; structural genomics co	7e-08
3v30_A	172	DNA-binding protein rfxank; structural genomics co	7e-05
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-12
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-12
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-11
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-09
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-08
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	7e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-12
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-11
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-10
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	7e-08
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-05
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	7e-12
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-10
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	2e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-07
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	4e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-12
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	1e-10
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-09
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	9e-07
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	9e-06
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-04
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-11
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	9e-08
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-11
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-10
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	8e-09
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-08
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-05
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	6e-04
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-11
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-10
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-09
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-05
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-11
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-10
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-10
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-10
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-11
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	5e-11
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-04
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	1e-11
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	9e-11
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-10
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-08
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	8e-08
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-06
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-11
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-10
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	3e-10
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-09
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-09
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-08
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-11
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	4e-11
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	6e-11
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-09
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-09
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-11
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-09
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-05
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-11
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-10
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-09
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	7e-09
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	3e-07
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	8e-05
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-11
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-09
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-09
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	4e-08
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-08
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-06
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	8e-04
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-11
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	3e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	5e-10
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-07
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	2e-06
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-11
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-11
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-09
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	6e-09
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-08
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-06
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	3e-06
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-11
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-09
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-09
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	6e-07
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-04
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	5e-11
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-08
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-04
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	7e-11
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-10
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-09
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	1e-06
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	8e-11
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-10
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-09
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	3e-09
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-08
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	9e-11
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-09
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-08
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-11
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-10
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-10
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-09
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	1e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	8e-08
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-07
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	9e-07
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-10
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-10
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	3e-09
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-08
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-05
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-10
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-10
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	9e-08
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	3e-07
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-10
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	8e-10
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-09
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	3e-06
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-04
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-10
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	8e-09
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-08
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	2e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-10
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-10
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-09
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-08
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	1e-06
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-10
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-10
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-09
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	1e-04
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	8e-10
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-09
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-10
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-09
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-07
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-06
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-04
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-10
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-09
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	6e-05
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-04
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	4e-10
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-08
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	5e-06
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-10
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	9e-10
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	5e-09
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-06
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-10
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-09
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-06
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-09
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	4e-09
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-08
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-07
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	7e-09
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-08
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-08
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	5e-07
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-09
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-09
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-09
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	2e-09
2dfs_A	1080	Myosin-5A; myosin-V, inhibited state, cryoelectron	3e-06
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-09
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-08
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-05
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	8e-04
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-09
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	5e-08
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	3e-06
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-04
2rfa_A	232	Transient receptor potential cation channel subfa	3e-09
2rfa_A	232	Transient receptor potential cation channel subfa	1e-08
2rfa_A	232	Transient receptor potential cation channel subfa	2e-08
2rfa_A	232	Transient receptor potential cation channel subfa	6e-08
2rfa_A	232	Transient receptor potential cation channel subfa	6e-06
1kk8_A	837	Myosin heavy chain, striated muscle; actin-detache	3e-09
2ycu_A	995	Non muscle myosin 2C, alpha-actinin; motor protein	9e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-08
1i84_S	1184	Smooth muscle myosin heavy chain; muscle protein,	3e-08
2pnn_A	273	Transient receptor potential cation channel subfa	3e-07
2pnn_A	273	Transient receptor potential cation channel subfa	3e-07
2pnn_A	273	Transient receptor potential cation channel subfa	7e-07
2pnn_A	273	Transient receptor potential cation channel subfa	2e-05
2etb_A	256	Transient receptor potential cation channel subfam	3e-07
2etb_A	256	Transient receptor potential cation channel subfam	4e-07
2etb_A	256	Transient receptor potential cation channel subfam	2e-06
2etb_A	256	Transient receptor potential cation channel subfam	5e-06
1g8x_A	1010	Myosin II heavy chain fused to alpha-actinin 3; mo	6e-07
3jxi_A	260	Vanilloid receptor-related osmotically activated p	9e-07
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-05
3jxi_A	260	Vanilloid receptor-related osmotically activated p	6e-05
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-05
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	1e-05
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-05
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-05
3muj_A	138	Transcription factor COE3; immunoglobulin like fol	6e-05

>2cxk_A Camta1, calmodulin binding transcription activator 1; structural genomics, TIG/IPT domain, NPPSFA; 1.85A {Homo sapiens} SCOP: b.1.18.1 Length = 95

 Score =  118 bits (296), Expect = 1e-31
 Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 6/93 (6%)

Query: 491 SQDQLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGV 550
           S      + D+SP+W+Y +  ++V++TG + ++        +SC+F ++ VPA ++  GV
Sbjct: 2   SSGSSGMVTDYSPEWSYPEGGVKVLITGPWQEA-----SNNYSCLFDQISVPASLIQPGV 56

Query: 551 LCCRIPPHAVGRVPFYITCSNRLACSEVREFDY 583
           L C  P H  G V   +  +N++  + V  F+Y
Sbjct: 57  LRCYCPAHDTGLVTLQVAFNNQIISNSV-VFEY 88

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 79.1 bits (196), Expect = 2e-18
 Identities = 18/44 (40%), Positives = 29/44 (65%)

Query: 907 HSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYR 950
            +A I+IQK  RGW  RK +L +++  + +Q +VRG+QAR   +
Sbjct: 5   RAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAK 48

>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 11/48 (22%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 929 IRQRIVKIQAHVRGHQARKKYRPIIWSVGILEKVILRW--RRKGSGLR 974
           +R   ++IQ  +RG   RK+Y  +  +   +++ +  +  R     LR
Sbjct: 4   LRAACIRIQKTIRGWLLRKRYLCMQRAAITVQRYVRGYQARCYAKFLR 51

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 66.3 bits (163), Expect = 5e-13
 Identities = 21/91 (23%), Positives = 32/91 (35%), Gaps = 6/91 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   LH A + G+   ++  +     +N       + LH AA  G    V +LLS G
Sbjct: 40  DHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYG 99

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
           A+   +            P D       K +
Sbjct: 100 ASRNAVNI------FGLRPVDYTDDESMKSL 124

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 60.1 bits (147), Expect = 8e-11
 Identities = 26/97 (26%), Positives = 40/97 (41%), Gaps = 18/97 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +  G+ +LH+A+  G   +++  +  G   N +D +GWT LH A   G  K V +LL   
Sbjct: 7   NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK 66

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 786
           A                      +P   A+ NGH  I
Sbjct: 67  ALVNTTGYQN------------DSPLHDAAKNGHVDI 91

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 48.2 bits (116), Expect = 1e-06
 Identities = 10/61 (16%), Positives = 23/61 (37%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +    LH AA  G+   +K  ++ G S N  ++ G   + +      +  + +     
Sbjct: 73  GYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNE 132

Query: 756 A 756
           +
Sbjct: 133 S 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 48.2 bits (116), Expect = 1e-06
 Identities = 19/75 (25%), Positives = 27/75 (36%), Gaps = 19/75 (25%)

Query: 722 GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPS 775
           G+     +  G T LH A+  G   +V  LL  G+ P      G             TP 
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAG------------WTPL 47

Query: 776 DLASSNGHKGISGFL 790
             A ++GH  +   L
Sbjct: 48  HEACNHGHLKVVELL 62

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 69.2 bits (170), Expect = 5e-13
 Identities = 28/98 (28%), Positives = 41/98 (41%), Gaps = 7/98 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL-SGWTALHWAAYCGREKTVAVLLSL 754
           D+ G+  L   A LG D  ++    AG  ++ RD+  G TALH AA   R + V  L+ L
Sbjct: 74  DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 133

Query: 755 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
           GA   +  +         T  +LA         G   +
Sbjct: 134 GADIEVEDE------RGLTALELAREILKTTPKGNPMQ 165

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 62.2 bits (152), Expect = 1e-10
 Identities = 20/102 (19%), Positives = 35/102 (34%), Gaps = 14/102 (13%)

Query: 695 LDDEGQGVLHLAASLGYDWAIKPTVT---AGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           +  E +     AA        +  ++       ++  D +G TAL + A  G +K V +L
Sbjct: 41  VVSEYETPWWTAARKAD----EQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLL 96

Query: 752 LSLGAAPGLLTDP-SPEFPLSRTPSDLASSNGHKGISGFLAE 792
              GA      D    +     T   +A+      +   L E
Sbjct: 97  AEAGA------DLDHRDMRGGLTALHMAAGYVRPEVVEALVE 132

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 56.8 bits (138), Expect = 6e-09
 Identities = 14/58 (24%), Positives = 17/58 (29%), Gaps = 8/58 (13%)

Query: 703 LHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
           LH+AA           V      G  I   D  G TAL  A    +       +  G 
Sbjct: 115 LHMAAGYVR----PEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 168

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 67.5 bits (166), Expect = 5e-13
 Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 19/104 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL-SGWTALHWAAYCGREKTVAVLLSL 754
           D+ G+  L   A LG D  ++    AG  ++ RD+  G TALH AA   R + V  L+ L
Sbjct: 73  DENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 132

Query: 755 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
           GA        G             T  +LA         G   +
Sbjct: 133 GADIEVEDERG------------LTALELAREILKTTPKGNPMQ 164

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 61.4 bits (150), Expect = 8e-11
 Identities = 19/105 (18%), Positives = 32/105 (30%), Gaps = 26/105 (24%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVT---AGVSINFRDLSGWTALHWAAYCGREKTVAVLL 752
             E +     AA        +  ++       ++  D +G TAL + A  G +K V +L 
Sbjct: 41  VSEYETPWWTAARKAD----EQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLA 96

Query: 753 SLGAAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             GA         G             T   +A+      +   L
Sbjct: 97  EAGADLDHRDMRGG------------LTALHMAAGYVRPEVVEAL 129

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 58.3 bits (142), Expect = 9e-10
 Identities = 14/54 (25%), Positives = 19/54 (35%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
           LH+AA       ++  V  G  I   D  G TAL  A    +       +  G 
Sbjct: 114 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGR 167

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 65.5 bits (161), Expect = 2e-12
 Identities = 28/91 (30%), Positives = 41/91 (45%), Gaps = 6/91 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             E +  L LA++ GY   +   +   V IN  D +G T L +A      K V  LL+ G
Sbjct: 66  AKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 125

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
           A      D + E     TP DLA + G++ +
Sbjct: 126 A------DLTTEADSGYTPMDLAVALGYRKV 150

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 58.6 bits (143), Expect = 5e-10
 Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 7/89 (7%)

Query: 703 LHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL 761
           +H  A+ G    +K  +  G   +N  D  G+T L WA+  G  +TV  LL  GA P +L
Sbjct: 6   IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHIL 65

Query: 762 TDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                      +   LAS+ G+  I G L
Sbjct: 66  AK------ERESALSLASTGGYTDIVGLL 88

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 56.3 bits (137), Expect = 3e-09
 Identities = 18/97 (18%), Positives = 28/97 (28%), Gaps = 18/97 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D+ G   L  A++ G    ++  +  G   +       +AL  A+  G    V +LL   
Sbjct: 33  DERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERD 92

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 786
                    G             TP   A    H   
Sbjct: 93  VDINIYDWNG------------GTPLLYAVRGNHVKC 117

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 52.4 bits (127), Expect = 7e-08
 Identities = 12/61 (19%), Positives = 21/61 (34%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   L  A    +   ++  +  G  +     SG+T +  A   G  K   V+ +  
Sbjct: 99  DWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHI 158

Query: 756 A 756
            
Sbjct: 159 L 159

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 43.6 bits (104), Expect = 7e-05
 Identities = 11/55 (20%), Positives = 15/55 (27%), Gaps = 5/55 (9%)

Query: 732 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
              ++H  A  G    +   L  G       D         TP   AS+ G    
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDER-----GFTPLIWASAFGEIET 51

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 63.4 bits (155), Expect = 3e-12
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +    L  AA  G D  ++  +  G  +  +D +G T LH AA  G  + V +LL  G
Sbjct: 21  GSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAG 80

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D   +    +T  D++  NG++ ++  L
Sbjct: 81  A------DVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 64.7 bits (159), Expect = 4e-12
 Identities = 28/95 (29%), Positives = 42/95 (44%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
               +  L LA S GY   +K  +  GV +N  D +G T L +A +    K V +LL  G
Sbjct: 66  GKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      DP+ E        DLA + G++ +   +
Sbjct: 126 A------DPTIETDSGYNSMDLAVALGYRSVQQVI 154

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 62.8 bits (154), Expect = 1e-11
 Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 6/84 (7%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762
           +H  A+ G    +   +     IN  D  G+T L WAA  G+   V  LL  GA P LL 
Sbjct: 7   VHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLG 66

Query: 763 DPSPEFPLSRTPSDLASSNGHKGI 786
                     +   LA S G+  I
Sbjct: 67  K------GRESALSLACSKGYTDI 84

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 56.2 bits (137), Expect = 3e-09
 Identities = 22/101 (21%), Positives = 29/101 (28%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D+EG   L  AA+ G    ++  +  G           +AL  A   G    V +LL  G
Sbjct: 33  DEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCG 92

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                    G             TP   A    H      L
Sbjct: 93  VDVNEYDWNG------------GTPLLYAVHGNHVKCVKML 121

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 53.5 bits (130), Expect = 2e-08
 Identities = 12/61 (19%), Positives = 20/61 (32%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   L  A    +   +K  + +G        SG+ ++  A   G      V+ S  
Sbjct: 99  DWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHL 158

Query: 756 A 756
            
Sbjct: 159 L 159

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 46.6 bits (112), Expect = 7e-06
 Identities = 11/66 (16%), Positives = 20/66 (30%), Gaps = 18/66 (27%)

Query: 731 SGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHK 784
           +   ++H  A  G    +A  +            G             TP   A+++G  
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEG------------FTPLMWAAAHGQI 49

Query: 785 GISGFL 790
            +  FL
Sbjct: 50  AVVEFL 55

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 66.0 bits (162), Expect = 7e-12
 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD G+  LH AA++    A    +  G + + ++    T L  AA  G  +T  VLL   
Sbjct: 154 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 213

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A                     R P D+A    H  I   L
Sbjct: 214 ANRDITDHMD------------RLPRDIAQERMHHDIVRLL 242

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 63.3 bits (155), Expect = 6e-11
 Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +G   L LAA L  +  ++  + +   +N  D  G +ALHWAA         VLL  G
Sbjct: 121 MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 180

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A   +  +         TP  LA+  G    +  L
Sbjct: 181 ANKDMQNN------REETPLFLAAREGSYETAKVL 209

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 62.5 bits (153), Expect = 1e-10
 Identities = 26/102 (25%), Positives = 35/102 (34%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G+  LHLAA      A K  + A    N +D  G T LH A     +    +L+   
Sbjct: 54  DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 113

Query: 756 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A         G             TP  LA+    +G+   L
Sbjct: 114 ATDLDARMHDG------------TTPLILAARLAVEGMLEDL 143

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 54.4 bits (132), Expect = 4e-08
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 15/100 (15%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 750
           D+ G+  LH A S       +             ++ R   G T L  AA    E  +  
Sbjct: 87  DNMGRTPLHAAVSADA----QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 142

Query: 751 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           L++  A    + D      L ++    A++  +   +  L
Sbjct: 143 LINSHADVNAVDD------LGKSALHWAAAVNNVDAAVVL 176

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 53.6 bits (130), Expect = 7e-08
 Identities = 27/115 (23%), Positives = 35/115 (30%), Gaps = 32/115 (27%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTA-------------GVSI-NFRDLSGWTALHWAAY 741
             +G   L +A+  G       +                G S+ N  D +G TALH AA 
Sbjct: 7   GPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAAR 66

Query: 742 CGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             R      LL   A        G            RTP   A S   +G+   L
Sbjct: 67  YSRSDAAKRLLEASADANIQDNMG------------RTPLHAAVSADAQGVFQIL 109

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 50.2 bits (121), Expect = 1e-06
 Identities = 10/67 (14%), Positives = 16/67 (23%), Gaps = 8/67 (11%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           ++  +  L LAA  G       T         + +  D         A        V +L
Sbjct: 187 NNREETPLFLAAREGS----YETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLL 242

Query: 752 LSLGAAP 758
                  
Sbjct: 243 DLEHHHH 249

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 45.9 bits (110), Expect = 3e-05
 Identities = 16/81 (19%), Positives = 27/81 (33%), Gaps = 18/81 (22%)

Query: 723 VSINFRDLSGWTALHWAAYCG-------------REKTVAVLLSLGAAPGLLTDPSPEFP 769
           + +N R   G+T L  A+  G                 ++  +  GA+    TD + E  
Sbjct: 1   MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETA 60

Query: 770 LSRTPSDLASSNGHKGISGFL 790
           L      LA+       +  L
Sbjct: 61  LH-----LAARYSRSDAAKRL 76

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 66.4 bits (163), Expect = 7e-12
 Identities = 27/115 (23%), Positives = 44/115 (38%), Gaps = 15/115 (13%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G   LH+AA+ GY   +K  + A   +N +D  GWT LH AA+ G+E+   +L+   
Sbjct: 196 AKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENL 255

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADD 810
                +        + +T  D+A  +             L  L     +  S   
Sbjct: 256 CDMEAVNK------VGQTAFDVADEDILG---------YLEELQKKQNLLHSEKR 295

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 62.5 bits (153), Expect = 2e-10
 Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           + +G   LH A        +K  V  G +IN  D  GW  LH AA CG       L+S G
Sbjct: 70  NVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQG 129

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A  G +           TP D+A     + +    
Sbjct: 130 AHVGAVNS------EGDTPLDIAEEEAMEELLQNE 158

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 53.3 bits (129), Expect = 2e-07
 Identities = 18/96 (18%), Positives = 29/96 (30%), Gaps = 18/96 (18%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 758
                 +    A +   +  ++      SG TALH AA  G  + + +L+          
Sbjct: 170 RKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKD 229

Query: 759 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
             G             TP   A+  G +     L E
Sbjct: 230 YDG------------WTPLHAAAHWGKEEACRILVE 253

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 52.5 bits (127), Expect = 3e-07
 Identities = 24/100 (24%), Positives = 35/100 (35%), Gaps = 18/100 (18%)

Query: 697 DEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
            +   V   A S G    +   +  G  IN+ ++ G TALH A        V  L+  GA
Sbjct: 38  FDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGA 97

Query: 757 AP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                   G              P   A+S G+  I+ +L
Sbjct: 98  NINQPDNEG------------WIPLHAAASCGYLDIAEYL 125

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 51.7 bits (125), Expect = 5e-07
 Identities = 21/116 (18%), Positives = 37/116 (31%), Gaps = 21/116 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D+EG   LH AAS GY    +  ++ G  +   +  G T L  A     E+ +   ++  
Sbjct: 103 DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162

Query: 756 AAPGLLTDPSPEFPLS---------------------RTPSDLASSNGHKGISGFL 790
                      E  +                       T   +A++ G+  +   L
Sbjct: 163 GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score = 49.0 bits (118), Expect = 4e-06
 Identities = 20/101 (19%), Positives = 31/101 (30%), Gaps = 19/101 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D + +    L   +G +  ++P V        +   G   L  A   G  + V  LL  G
Sbjct: 5   DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLA-ACSSGDTEEVLRLLERG 63

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A        GL            T    A  + +  +  FL
Sbjct: 64  ADINYANVDGL------------TALHQACIDDNVDMVKFL 92

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 67.1 bits (165), Expect = 8e-12
 Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   LH A S G+    +  +  G  +N  DL  +T LH AA   R +  ++LLS G
Sbjct: 88  DKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHG 147

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A P L+          ++  D+A +   +    + 
Sbjct: 148 ADPTLVNC------HGKSAVDMAPTPELRERLTYE 176

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 63.3 bits (155), Expect = 1e-10
 Identities = 22/99 (22%), Positives = 32/99 (32%), Gaps = 11/99 (11%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
               +  LH A +  +    K         G ++N ++    T LH AA       + VL
Sbjct: 208 PQSHETALHCAVASLHP-KRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVL 266

Query: 752 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
              GA    L        L +T    A+  GH      L
Sbjct: 267 HKHGAKMNALDS------LGQTALHRAALAGHLQTCRLL 299

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 58.7 bits (143), Expect = 4e-09
 Identities = 22/95 (23%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D      LHLAA       ++  +  G  ++ +D  G   LH A   G  +   +LL  G
Sbjct: 55  DGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHG 114

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A        +       TP   A+S     +   L
Sbjct: 115 A------CVNAMDLWQFTPLHEAASKNRVEVCSLL 143

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 57.9 bits (141), Expect = 6e-09
 Identities = 20/61 (32%), Positives = 31/61 (50%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           + +    LH+AA   ++  ++     G  +N  D  G TALH AA  G  +T  +LLS G
Sbjct: 244 NKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYG 303

Query: 756 A 756
           +
Sbjct: 304 S 304

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 57.9 bits (141), Expect = 8e-09
 Identities = 24/102 (23%), Positives = 34/102 (33%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLG-YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 754
            +  +  L  AA  G  +  +       V+ +  D    T LH AA   R + V +LL  
Sbjct: 21  GEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQH 80

Query: 755 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA        G              P   A S GH  ++  L
Sbjct: 81  GADVHAKDKGG------------LVPLHNACSYGHYEVTELL 110

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 51.3 bits (124), Expect = 9e-07
 Identities = 10/62 (16%), Positives = 18/62 (29%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D      LH AAS          ++ G      +  G +A+  A      + +       
Sbjct: 121 DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGH 180

Query: 756 AA 757
           + 
Sbjct: 181 SL 182

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 48.6 bits (117), Expect = 7e-06
 Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 5/61 (8%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  GQ  LH AA  G+    +  ++ G   +   L G+TA          + V  +LS  
Sbjct: 277 DSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN-----EAVQQILSES 331

Query: 756 A 756
            
Sbjct: 332 T 332

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 48.3 bits (116), Expect = 9e-06
 Identities = 21/94 (22%), Positives = 32/94 (34%), Gaps = 9/94 (9%)

Query: 700 QGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA---YCGREKTVAVLLSLGA 756
              L  AA       +K T+   +    +  S  TALH A    +  R++   +LL  GA
Sbjct: 179 GHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGA 238

Query: 757 APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                           TP  +A+   H  +   L
Sbjct: 239 NVNEKNK------DFMTPLHVAAERAHNDVMEVL 266

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 43.3 bits (103), Expect = 3e-04
 Identities = 18/93 (19%), Positives = 23/93 (24%), Gaps = 20/93 (21%)

Query: 699 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA-YCGREKTVAVLLSLGAA 757
           G+  L LA                             L  AA     EK +A+L  L   
Sbjct: 4   GKSALDLADP-------------SAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNV- 49

Query: 758 PGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                +         TP  LA+      I   L
Sbjct: 50  -----NCHASDGRKSTPLHLAAGYNRVRIVQLL 77

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 68.3 bits (166), Expect = 1e-11
 Identities = 105/719 (14%), Positives = 209/719 (29%), Gaps = 239/719 (33%)

Query: 175 ITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPRMEKMDSGLS--Y 232
           + D         LS E+ D    ++D+   + R  L++ L         + ++  L   Y
Sbjct: 38  VQDMPKSI----LSKEEIDHIIMSKDAVSGTLR--LFWTLLSKQEEMVQKFVEEVLRINY 91

Query: 233 SYFLSPSSGCPEVRSSIPGDYVSHAGHIPNDNQDLMIECQKALGLASWEEVLEHCSGEND 292
            + +SP        S +   Y+     + NDNQ                           
Sbjct: 92  KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF----------------------AKY 129

Query: 293 NVP---PHAKLESNVQK----ENIF-DGELLSREASEENSGSSLPVQFNWQIPLADNSSH 344
           NV    P+ KL   + +    +N+  DG L          GS                  
Sbjct: 130 NVSRLQPYLKLRQALLELRPAKNVLIDGVL----------GSG----------------- 162

Query: 345 FLKSIM--DLSRDLEPAYDLGDGLF-----EQRTHDACLLGAPEPFCAFLDQQNELPVQN 397
             K+ +  D+    +    +   +F        + +             L+   +L  Q 
Sbjct: 163 --KTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETV-----------LEMLQKLLYQI 209

Query: 398 NLQMQQRDVESHSQTKSNSESEIHGEGTINFSFSVKQKLLNGEGNLEKVDSFSRWMSKEL 457
           +     R  +  S  K    S       +  S   +  LL     L  V       +K  
Sbjct: 210 DPNWTSR-SDHSSNIKLRIHSIQAELRRLLKSKPYENCLL----VLLNV-----QNAKAW 259

Query: 458 EEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQLFSIIDFSPKWTYTDPEIEVVVT 517
              +               C  ++         ++ +   + DF    T T   ++    
Sbjct: 260 NAFNL-------------SCKILL--------TTRFK--QVTDFLSAATTTHISLDHHSM 296

Query: 518 GMFLKSHQEVAKCKWSCMFAE-VEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACS 576
            +   +  EV       +  + ++   + L         P   +   P           S
Sbjct: 297 TL---TPDEVKS-----LLLKYLDCRPQDL---------PREVLTTNP--------RRLS 331

Query: 577 EVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKL-- 634
                  I+       I D  G +T +++ H+  +++ ++  S  N L     E +K+  
Sbjct: 332 -------IIA----ESIRD--GLATWDNWKHVNCDKLTTIIESSLNVLEPA--EYRKMFD 376

Query: 635 ---I----SKI---------IQLKEEEE--------SYQMVEANPEKN----------LS 660
              +    + I           + + +          Y +VE  P+++          L 
Sbjct: 377 RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436

Query: 661 QHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT 720
             +E    L + + +  Y+ + +    D   P  LD       +  + +G+   +K    
Sbjct: 437 VKLENEYALHRSIVDH-YN-IPKTFDSDDLIPPYLDQ------YFYSHIGHH--LKNIEH 486

Query: 721 AGVSINFRDLSGWTALHW---------AAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLS 771
                 FR +  +    +          A+      +  L  L      + D  P++   
Sbjct: 487 PERMTLFRMV--FLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKY--E 542

Query: 772 RTPSDLASSNGHKGISGFL--AESSL-----TSLL-LSLKMNDSADDGALEDSIAKAVQ 822
           R  + +           FL   E +L     T LL ++L M +  D+   E++  K VQ
Sbjct: 543 RLVNAILD---------FLPKIEENLICSKYTDLLRIAL-MAE--DEAIFEEA-HKQVQ 588

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.6 bits (151), Expect = 6e-10
 Identities = 81/619 (13%), Positives = 174/619 (28%), Gaps = 186/619 (30%)

Query: 573  LACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERIL-SMRSSPQNHLSEGLCEK 631
              C +V+  D     +   +I  I  S  + S       R+  ++ S  +  + + + E 
Sbjct: 33   FDCKDVQ--DMPKSILSKEEIDHIIMSKDAVS----GTLRLFWTLLSKQEEMVQKFVEEV 86

Query: 632  QK-----LISKI----IQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLL 682
             +     L+S I     Q       Y + + +   N +Q   KY + +     KL   LL
Sbjct: 87   LRINYKFLMSPIKTEQRQPSMMTRMY-IEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL 145

Query: 683  R-----KVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALH 737
                   V  DG         G+    +A  +   + ++  +   +              
Sbjct: 146  ELRPAKNVLIDGVLGS-----GKTW--VALDVCLSYKVQCKMDFKI-------------F 185

Query: 738  WA--AYCGREKTV-AVLLSL--GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
            W     C   +TV  +L  L     P   +       +      + +      +   L  
Sbjct: 186  WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAE-----LRRLLKS 240

Query: 793  SSLTSLLLSLKMNDSADDGALEDS-IAKA--------VQT--------VSEKTATPANDN 835
                + LL L       +  ++++    A        + T        +S  T T  + +
Sbjct: 241  KPYENCLLVL------LN--VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLD 292

Query: 836  DESDVLSLKDSLTAICNAT---------QA-----------ADRIHQ-IFRMQSFQRKQL 874
              S  L+  +  + +             +            A+ I   +    +++    
Sbjct: 293  HHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNC 352

Query: 875  TEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQIQKKFRG------------WKK 922
             +    +  S            L P +   +    ++     F              W  
Sbjct: 353  DKLTTIIESSLNV---------LEPAEYRKMFDRLSV-----FPPSAHIPTILLSLIWFD 398

Query: 923  RKEF-------------LLIRQ------RIVKIQAHVRGHQARKKYRPIIWSVGILEKVI 963
              +              L+ +Q       I  I   ++     +           L + I
Sbjct: 399  VIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYA---------LHRSI 449

Query: 964  LRWRRKGSGLRGFRRDALGMNPNPQ--------HMPLKED------------DYDFLKDG 1003
            +         + F  D L      Q        H+   E             D+ FL+  
Sbjct: 450  VDHYNI---PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLE-- 504

Query: 1004 RK-QTEERLQKALGRVKSMVQYPEARAQYRRLLTVVEGSRETKES---NMVPNGLEDIAD 1059
            +K + +     A G + + +Q  +    Y+  +   +   E   +   + +P   E++  
Sbjct: 505  QKIRHDSTAWNASGSILNTLQQLK---FYKPYICDNDPKYERLVNAILDFLPKIEENLIC 561

Query: 1060 GD-LDLIDIDSLLDDDTFM 1077
                DL+ I +L+ +D  +
Sbjct: 562  SKYTDLLRI-ALMAEDEAI 579

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.6 bits (133), Expect = 9e-08
 Identities = 75/585 (12%), Positives = 166/585 (28%), Gaps = 194/585 (33%)

Query: 38  NYQKF---HIASEPPSRPPSGSLFLFDRKVLRYFR-----KDGHNWRKKKDGKTVREAHE 89
           NY KF    I +E   R PS    ++  +  R +         +  R +     +R+A  
Sbjct: 90  NY-KFLMSPIKTEQ--RQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPY-LKLRQALL 145

Query: 90  KLKVGSVDVLH--------CYYAHGEDNENFQRR----CYWM-----------LE--QDL 124
           +L+     ++                 +   Q +     +W+           LE  Q L
Sbjct: 146 ELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205

Query: 125 MHIVFVHYLEVQGNKSN-------VGDRESNEVTSNPGKHSSL------------TFSFP 165
           ++ +  ++     + SN       +       + S P ++  L             F+  
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNL- 264

Query: 166 GNR---TKAPSGITDSTSPTSTLTLSCEDADSGYDAEDSHQASSRAHLYYELPQMGNGPR 222
             +   T     +TD  S  +T  +S +        ++      +               
Sbjct: 265 SCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKY-------------- 310

Query: 223 MEKMDSGLSYSYFLSPSSGC---PEVRSSIPG---DYVSHAG---HIPNDNQDLMIE-CQ 272
                  L       P       P   S I     D ++      H+  D    +IE   
Sbjct: 311 -------LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSL 363

Query: 273 KALGLASWEEVLEHCS--GENDNVPPHAKLESNVQKENIFDGELLSREASE---ENSGSS 327
             L  A + ++ +  S    + ++P    L        +   +++  +      +    S
Sbjct: 364 NVLEPAEYRKMFDRLSVFPPSAHIPTIL-LS-------LIWFDVIKSDVMVVVNKLHKYS 415

Query: 328 LPVQFNWQIPLADNSSHFLKSIMDLSRDLEPAYDLGDGLFEQRTHDACLLGAPEPFCAFL 387
           L         +         SI  +  +L                               
Sbjct: 416 L---------VEKQPKESTISIPSIYLEL------------------------------- 435

Query: 388 DQQNELPVQNNLQMQQRDVESHSQTK---SNSESEIHGEGTINFSFSVKQKL---LNGEG 441
               ++ ++N   + +  V+ ++  K   S+     + +    +S      +   L    
Sbjct: 436 ----KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYF-YSH-----IGHHLKNIE 485

Query: 442 NLEKVDSFS------RWMSKELEEVDNLHVQSSGIEWSTEECGNVVDDSSLSPSLSQDQL 495
           + E++  F       R++ +++              W+           S+  +L Q + 
Sbjct: 486 HPERMTLFRMVFLDFRFLEQKIR--------HDSTAWNAS--------GSILNTLQQLKF 529

Query: 496 FS--IIDFSPKWTYTDPEIEVVVTGM--FLKSHQE-VAKCKWSCM 535
           +   I D        DP+ E +V  +  FL   +E +   K++ +
Sbjct: 530 YKPYICD-------NDPKYERLVNAILDFLPKIEENLICSKYTDL 567

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 64.6 bits (158), Expect = 1e-11
 Identities = 24/96 (25%), Positives = 38/96 (39%), Gaps = 15/96 (15%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 750
           D  G   L+ A   G+    K  V        + +N ++  G TALH AA+ G    V +
Sbjct: 103 DKAGSTALYWACHGGH----KDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQL 158

Query: 751 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
           LL+ GA   L           +   D+A++     +
Sbjct: 159 LLAKGARTDLRNI------EKKLAFDMATNAACASL 188

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 61.9 bits (151), Expect = 1e-10
 Identities = 22/91 (24%), Positives = 38/91 (41%), Gaps = 5/91 (5%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
            +     LH AA  G    ++  +   V +N  D +G TAL+WA + G +  V +L +  
Sbjct: 70  AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQP 129

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
                  + + +  L  T    A+  G+  I
Sbjct: 130 NI-----ELNQQNKLGDTALHAAAWKGYADI 155

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 56.1 bits (136), Expect = 8e-09
 Identities = 14/88 (15%), Positives = 24/88 (27%), Gaps = 6/88 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +  G   LH AA  GY   ++  +  G   + R++    A   A        +       
Sbjct: 137 NKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTD 196

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGH 783
           A   L               + +    H
Sbjct: 197 AVRTLSNAE------DYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 54.2 bits (131), Expect = 4e-08
 Identities = 17/91 (18%), Positives = 21/91 (23%), Gaps = 11/91 (12%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
            D          S G    I         +  +  S    LH AA  G    +   L   
Sbjct: 42  TDMSDTNWWKGTSKGRTGLIP-----SNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNR 96

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
                    +       T    A   GHK I
Sbjct: 97  V------GVNGLDKAGSTALYWACHGGHKDI 121

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 46.1 bits (110), Expect = 2e-05
 Identities = 11/56 (19%), Positives = 16/56 (28%), Gaps = 6/56 (10%)

Query: 732 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGIS 787
           G   +  A Y    +T   L           D      +S T     +S G  G+ 
Sbjct: 12  GQVKVFRALYTFEPRTPDELYIEEG------DIIYITDMSDTNWWKGTSKGRTGLI 61

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 41.5 bits (98), Expect = 6e-04
 Identities = 10/88 (11%), Positives = 15/88 (17%), Gaps = 11/88 (12%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762
           +  A                  I +      T        GR   +         P    
Sbjct: 16  VFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI---------PSNYV 66

Query: 763 DPSPEFPLSRTPSDLASSNGHKGISGFL 790
               E      P   A+  G+       
Sbjct: 67  AEQAES--IDNPLHEAAKRGNLSWLREC 92

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 64.9 bits (159), Expect = 1e-11
 Identities = 29/99 (29%), Positives = 38/99 (38%), Gaps = 11/99 (11%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           +DEG   LH A   G+       V      GV++N  D  GWT LH AA C   +    L
Sbjct: 67  NDEGITALHNAVCAGH----TEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFL 122

Query: 752 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           +  GAA   +T    +              G+   S FL
Sbjct: 123 VESGAAVFAMTYSDMQTA---ADKCEEMEEGYTQCSQFL 158

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 60.7 bits (148), Expect = 3e-10
 Identities = 19/95 (20%), Positives = 27/95 (28%), Gaps = 7/95 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +  GQ  L               +  G+ + F  L     L  ++  G    V  ++   
Sbjct: 2   EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFNPL-PLALLLDSSLEGEFDLVQRIIYEV 60

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                  DPS       T    A   GH  I  FL
Sbjct: 61  D------DPSLPNDEGITALHNAVCAGHTEIVKFL 89

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 58.0 bits (141), Expect = 3e-09
 Identities = 19/101 (18%), Positives = 33/101 (32%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +     +L  ++  G    ++  +      +  +  G TALH A   G  + V  L+  G
Sbjct: 34  NPLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFG 93

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                    G             TP   A+S  +  +  FL
Sbjct: 94  VNVNAADSDG------------WTPLHCAASCNNVQVCKFL 122

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 45.7 bits (109), Expect = 3e-05
 Identities = 14/92 (15%), Positives = 22/92 (23%), Gaps = 9/92 (9%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSG---WTALHWAAYCGREKTVAVLL 752
           D +G   LH AAS       K  V +G ++     S              G  +    L 
Sbjct: 100 DSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 159

Query: 753 SLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 784
            +    G++                       
Sbjct: 160 GVQEKMGIMNKG------VIYALWDYEPQNDD 185

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 63.6 bits (156), Expect = 1e-11
 Identities = 22/107 (20%), Positives = 37/107 (34%), Gaps = 26/107 (24%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           +      LHLAAS G+    +  V         IN  +  G   LH+A + G+++    L
Sbjct: 69  NRGDDTPLHLAASHGH----RDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDL 124

Query: 752 LSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
           ++ GA        G              P D A +   + +     +
Sbjct: 125 VANGALVSICNKYG------------EMPVDKAKAPLRELLRERAEK 159

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 60.9 bits (149), Expect = 1e-10
 Identities = 16/88 (18%), Positives = 24/88 (27%), Gaps = 12/88 (13%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           ++ G   LH A   G D   +  V  G  ++  +  G   +  A    RE        +G
Sbjct: 102 NEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG 161

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGH 783
                           R P       G 
Sbjct: 162 QNLN------------RIPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 60.1 bits (147), Expect = 2e-10
 Identities = 25/102 (24%), Positives = 37/102 (36%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSL 754
             E    +      G   A++  +      +N  D  G++ LHWA   GR   V +L+  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 755 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA                      TP  LA+S+GH+ I   L
Sbjct: 62  GARINVMNRGD------------DTPLHLAASHGHRDIVQKL 91

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 58.6 bits (143), Expect = 6e-10
 Identities = 25/101 (24%), Positives = 31/101 (30%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD G   LH A   G    ++  +  G  IN  +    T LH AA  G    V  LL   
Sbjct: 36  DDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYK 95

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A        G              P   A   G   ++  L
Sbjct: 96  ADINAVNEHG------------NVPLHYACFWGQDQVAEDL 124

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 62.8 bits (154), Expect = 1e-11
 Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
               +  LH+AAS G+   ++  +  G  +N +D+   TALHWA     ++ V +L+  G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A                     +T  D++  NG++ ++  L
Sbjct: 124 ADVHTQSKFC------------KTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 60.9 bits (149), Expect = 5e-11
 Identities = 32/99 (32%), Positives = 40/99 (40%), Gaps = 14/99 (14%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           D  G   LHLAA  G+      T      AGVS + R     T LH AA  G    V VL
Sbjct: 31  DWLGTSPLHLAAQYGH----FSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVL 86

Query: 752 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           L  GA      D + +  L  T    A+ + H+ +   L
Sbjct: 87  LKHGA------DVNAKDMLKMTALHWATEHNHQEVVELL 119

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 42.0 bits (100), Expect = 2e-04
 Identities = 15/64 (23%), Positives = 23/64 (35%), Gaps = 17/64 (26%)

Query: 732 GWTALHWAAYCGREKTVAVLLSLGA-----APGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
               L  AA  G++  V +L++ GA       G             +P  LA+  GH   
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTTDWLG------------TSPLHLAAQYGHFST 49

Query: 787 SGFL 790
           +  L
Sbjct: 50  TEVL 53

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 64.4 bits (158), Expect = 1e-11
 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD G+  LH AA++    A    +  G + + ++    T L  AA  G  +T  VLL   
Sbjct: 122 DDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF 181

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A                     R P D+A    H  I   L
Sbjct: 182 ANRDITDHMD------------RLPRDIAQERMHHDIVRLL 210

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 62.0 bits (152), Expect = 9e-11
 Identities = 26/102 (25%), Positives = 35/102 (34%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G+  LHLAA      A K  + A    N +D  G T LH A     +    +L+   
Sbjct: 22  DRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNR 81

Query: 756 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A         G             TP  LA+    +G+   L
Sbjct: 82  ATDLDARMHDG------------TTPLILAARLAVEGMLEDL 111

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 60.5 bits (148), Expect = 3e-10
 Identities = 26/101 (25%), Positives = 36/101 (35%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +G   L LAA L  +  ++  + +   +N  D  G +ALHWAA         VLL  G
Sbjct: 89  MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG 148

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A                      TP  LA+  G    +  L
Sbjct: 149 ANKDMQNNRE------------ETPLFLAAREGSYETAKVL 177

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 53.2 bits (129), Expect = 7e-08
 Identities = 19/100 (19%), Positives = 34/100 (34%), Gaps = 15/100 (15%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTA-----GVSINFRDLSGWTALHWAAYCGREKTVAV 750
           D+ G+  LH A S       +             ++ R   G T L  AA    E  +  
Sbjct: 55  DNMGRTPLHAAVSADA----QGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 110

Query: 751 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           L++  A      D +    L ++    A++  +   +  L
Sbjct: 111 LINSHA------DVNAVDDLGKSALHWAAAVNNVDAAVVL 144

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 53.2 bits (129), Expect = 8e-08
 Identities = 10/61 (16%), Positives = 17/61 (27%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           ++  +  L LAA  G     K  +    + +  D         A        V +L    
Sbjct: 155 NNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214

Query: 756 A 756
            
Sbjct: 215 L 215

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 47.8 bits (115), Expect = 5e-06
 Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 722 GVSI-NFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 780
           G S+ N  D +G TALH AA   R      LL   A      D + +  + RTP   A S
Sbjct: 14  GASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA------DANIQDNMGRTPLHAAVS 67

Query: 781 NGHKGISGFL 790
              +G+   L
Sbjct: 68  ADAQGVFQIL 77

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 64.0 bits (157), Expect = 2e-11
 Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 10/99 (10%)

Query: 696 DDEGQGVLHLAASLGYDWA----IKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           D++G   LH+A   G   A    +      G  ++  +    T LH A        V +L
Sbjct: 6   DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLL 65

Query: 752 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           ++ GA       P       +T + LA  +        L
Sbjct: 66  VTAGA------SPMALDRHGQTAAHLACEHRSPTCLRAL 98

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 60.5 bits (148), Expect = 3e-10
 Identities = 23/95 (24%), Positives = 32/95 (33%), Gaps = 2/95 (2%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           ++  Q  LHLA        ++  VTAG S    D  G TA H A        +  LL   
Sbjct: 43  NNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSA 102

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A   L  +         T   +A +   +     L
Sbjct: 103 APGTLDLEARNYD--GLTALHVAVNTECQETVQLL 135

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 60.5 bits (148), Expect = 3e-10
 Identities = 21/88 (23%), Positives = 32/88 (36%), Gaps = 6/88 (6%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762
           L  A        ++  +  G ++N +  SG +ALH A+  G    V  L+  GA   L  
Sbjct: 154 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 213

Query: 763 DPSPEFPLSRTPSDLASSNGHKGISGFL 790
                   + TP  +A S     I    
Sbjct: 214 C------HNDTPLMVARSRRVIDILRGK 235

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 58.2 bits (142), Expect = 2e-09
 Identities = 25/104 (24%), Positives = 36/104 (34%), Gaps = 19/104 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV--------TAGVSINFRDLSGWTALHWAAYCGREKT 747
           D  GQ   HLA            +           + +  R+  G TALH A     ++T
Sbjct: 76  DRHGQTAAHLACEHRS----PTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET 131

Query: 748 VAVLLSLGAAPGLLTDP-SPEFPLSRTPSDLASSNGHKGISGFL 790
           V +LL  GA      D  + +    R+P   A  N    +   L
Sbjct: 132 VQLLLERGA------DIDAVDIKSGRSPLIHAVENNSLSMVQLL 169

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 56.3 bits (137), Expect = 9e-09
 Identities = 21/102 (20%), Positives = 34/102 (33%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL-SGWTALHWAAYCGREKTVAVLLSL 754
           + +G   LH+A +      ++  +  G  I+  D+ SG + L  A        V +LL  
Sbjct: 113 NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH 172

Query: 755 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA        G             +    AS  G   +   L
Sbjct: 173 GANVNAQMYSG------------SSALHSASGRGLLPLVRTL 202

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 54.0 bits (131), Expect = 5e-08
 Identities = 11/61 (18%), Positives = 20/61 (32%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G   LH A+  G    ++  V +G   + ++    T L  A        +    +  
Sbjct: 180 MYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRP 239

Query: 756 A 756
           A
Sbjct: 240 A 240

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 64.1 bits (157), Expect = 2e-11
 Identities = 23/99 (23%), Positives = 31/99 (31%), Gaps = 10/99 (10%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
            ++G   LHLA            +         +NF++    T LH A    + +    L
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 752 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           L  G  P L            TP  LA   G     G L
Sbjct: 65  LGAGCDPELRDF------RGNTPLHLACEQGCLASVGVL 97

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 63.3 bits (155), Expect = 4e-11
 Identities = 28/95 (29%), Positives = 36/95 (37%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           ++  Q  LHLA         +  + AG     RD  G T LH A   G   +V VL    
Sbjct: 42  NNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSC 101

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             P L +          T   LAS +G+ GI   L
Sbjct: 102 TTPHLHSILKATNYNGHTCLHLASIHGYLGIVELL 136

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 62.6 bits (153), Expect = 6e-11
 Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSL 754
           +  G   LHLA+  GY   ++  V+ G  +N ++  +G TALH A        V++LL  
Sbjct: 114 NYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC 173

Query: 755 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA        G             +P  L        I   L
Sbjct: 174 GADVNRVTYQG------------YSPYQLTWGRPSTRIQQQL 203

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 58.7 bits (143), Expect = 2e-09
 Identities = 26/105 (24%), Positives = 38/105 (36%), Gaps = 11/105 (10%)

Query: 692 PCILDDEGQGVLHLAASLGYDWAIK------PTVTAGVSINFRDLSGWTALHWAAYCGRE 745
           P + D  G   LHLA   G   ++        T      +   + +G T LH A+  G  
Sbjct: 71  PELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYL 130

Query: 746 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             V +L+SLGA        +      RT   LA    +  +   L
Sbjct: 131 GIVELLVSLGADVNAQEPCN-----GRTALHLAVDLQNPDLVSLL 170

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 56.8 bits (138), Expect = 7e-09
 Identities = 13/92 (14%), Positives = 24/92 (26%), Gaps = 6/92 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G+  LHLA  L     +   +  G  +N     G++           +    L  L 
Sbjct: 148 PCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLT 207

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGIS 787
                  +     P S       + +     +
Sbjct: 208 L------ENLQMLPESEDEESYDTESEFTEFT 233

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 60.9 bits (149), Expect = 3e-11
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 6/91 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
            + G+  LH AA  G    ++  +  G  IN  D    T L  A Y G    V +LLS G
Sbjct: 37  LEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKG 96

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
           A      D + + P   T  +   +   K +
Sbjct: 97  A------DKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 56.3 bits (137), Expect = 1e-09
 Identities = 24/90 (26%), Positives = 30/90 (33%), Gaps = 18/90 (20%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA---AP- 758
              A   G    +K  V  G  +N     G   LH+AA CG+ + +  LL  GA   AP 
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70

Query: 759 --GLLTDPSPEFPLSRTPSDLASSNGHKGI 786
                           TP   A   GH   
Sbjct: 71  KHH------------ITPLLSAVYEGHVSC 88

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 43.2 bits (103), Expect = 5e-05
 Identities = 11/55 (20%), Positives = 15/55 (27%), Gaps = 6/55 (10%)

Query: 732 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
                 WA   G    V   ++ G       D +      R P   A+  G   I
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGE------DVNRTLEGGRKPLHYAADCGQLEI 55

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 64.4 bits (158), Expect = 3e-11
 Identities = 22/95 (23%), Positives = 32/95 (33%), Gaps = 7/95 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +    LH A   G+   +K  +  G  +N       T L  A   G    V +LL  G
Sbjct: 89  TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG 148

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A+    +D         +P   A+  GH      L
Sbjct: 149 ASVQPESD-------LASPIHEAARRGHVECVNSL 176

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 62.9 bits (154), Expect = 1e-10
 Identities = 16/95 (16%), Positives = 31/95 (32%), Gaps = 7/95 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           + +    +H AA  G+   +   +  G +I+ +     T L+ A    +   V  LL  G
Sbjct: 154 ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG 213

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A                +P         + ++  L
Sbjct: 214 ADVNQGKG-------QDSPLHAVVRTASEELACLL 241

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 59.8 bits (146), Expect = 1e-09
 Identities = 21/88 (23%), Positives = 34/88 (38%), Gaps = 6/88 (6%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762
           +H AA  G+  +++  ++ G ++N       + LH A   G    V +LL  GA    +T
Sbjct: 63  MHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVT 122

Query: 763 DPSPEFPLSRTPSDLASSNGHKGISGFL 790
                     TP   A  +G       L
Sbjct: 123 A------DWHTPLFNACVSGSWDCVNLL 144

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 57.1 bits (139), Expect = 7e-09
 Identities = 14/88 (15%), Positives = 26/88 (29%), Gaps = 7/88 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
                  L+LA        +K  + +G  +N +     + LH       E+   +L+  G
Sbjct: 187 ISHLGTPLYLACENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFG 245

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGH 783
           A               + P +L      
Sbjct: 246 ADTQAKNA------EGKRPVELVPPESP 267

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 52.5 bits (127), Expect = 3e-07
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 9/95 (9%)

Query: 697 DEGQGVLHLAASLGY-DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  QG +  +   G  D+     ++  +  +      W+ +H AA  G + ++  L+S G
Sbjct: 25  DGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVS--DWSPMHEAAIHGHQLSLRNLISQG 82

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            A  ++T          +P   A   GH      L
Sbjct: 83  WAVNIITA------DHVSPLHEACLGGHLSCVKIL 111

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 44.8 bits (107), Expect = 8e-05
 Identities = 7/61 (11%), Positives = 13/61 (21%), Gaps = 1/61 (1%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
                  LH       +      +  G     ++  G   +           +  L   G
Sbjct: 219 GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQL-FLEREG 277

Query: 756 A 756
           A
Sbjct: 278 A 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 64.4 bits (158), Expect = 3e-11
 Identities = 25/99 (25%), Positives = 34/99 (34%), Gaps = 4/99 (4%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G     LAA  G    +K  ++ G  +N  D  G+TA   AA  G+ K +  L   G
Sbjct: 69  KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 128

Query: 756 AAP----GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A          D         T    A+  GH  +   L
Sbjct: 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKIL 167

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 58.6 bits (143), Expect = 2e-09
 Identities = 22/106 (20%), Positives = 29/106 (27%), Gaps = 23/106 (21%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           D+ G+  L  A     D  ++         G  +N R   G T L  A        V  L
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238

Query: 752 LS-LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           L             G            +T   LA     K I+  L
Sbjct: 239 LEQEHIEINDTDSDG------------KTALLLAVELKLKKIAELL 272

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 57.5 bits (140), Expect = 5e-09
 Identities = 22/95 (23%), Positives = 34/95 (35%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           ++ G   LH A  +  +  ++  +  G     R  +G T    AA  G  K + + LS G
Sbjct: 36  EEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKG 95

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D +       T    A+  G      FL
Sbjct: 96  A------DVNECDFYGFTAFMEAAVYGKVKALKFL 124

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 54.8 bits (133), Expect = 4e-08
 Identities = 17/66 (25%), Positives = 23/66 (34%), Gaps = 9/66 (13%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 750
            + G+  L LA    +       V        + IN  D  G TAL  A     +K   +
Sbjct: 216 GERGKTPLILAVEKKH----LGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAEL 271

Query: 751 LLSLGA 756
           L   GA
Sbjct: 272 LCKRGA 277

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 54.8 bits (133), Expect = 5e-08
 Identities = 25/119 (21%), Positives = 34/119 (28%), Gaps = 31/119 (26%)

Query: 687 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAY 741
           +  +    L   G   L  AA  G+       +       G  +N  D  G  AL  A  
Sbjct: 136 KTKEDQERLRKGGATALMDAAEKGH----VEVLKILLDEMGADVNACDNMGRNALIHALL 191

Query: 742 CGREKT----VAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
              +        +LL  GA        G            +TP  LA    H G+   L
Sbjct: 192 SSDDSDVEAITHLLLDHGADVNVRGERG------------KTPLILAVEKKHLGLVQRL 238

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 48.6 bits (117), Expect = 5e-06
 Identities = 27/123 (21%), Positives = 36/123 (29%), Gaps = 34/123 (27%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD----------LSGWTALHWAAYCGRE 745
           D  G      AA  G   A+K     G ++N R             G TAL  AA  G  
Sbjct: 102 DFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHV 161

Query: 746 KTVAVLLS-LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSL 798
           + + +LL  +GA        G            R     A  +        +       L
Sbjct: 162 EVLKILLDEMGADVNACDNMG------------RNALIHALLSSDDSDVEAITH-----L 204

Query: 799 LLS 801
           LL 
Sbjct: 205 LLD 207

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score = 41.7 bits (99), Expect = 8e-04
 Identities = 12/59 (20%), Positives = 14/59 (23%), Gaps = 5/59 (8%)

Query: 732 GWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
               L  A        V  LL  GA      +     PL       A     + I   L
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLH-----NAVQMSREDIVELL 58

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 65.6 bits (161), Expect = 3e-11
 Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             + Q  LH AA +G+   +K  +    + N    +G T LH AA  G  +TV  LL   
Sbjct: 77  AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 136

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A        +       TP  +A+  G   ++  L
Sbjct: 137 A------SQACMTKKGFTPLHVAAKYGKVRVAELL 165

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 65.6 bits (161), Expect = 4e-11
 Identities = 24/95 (25%), Positives = 40/95 (42%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G   LH+A+  G    +K  +     +N +   G++ LH AA  G    V +LL  G
Sbjct: 308 TRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNG 367

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A+P  ++          TP  +A   G+  ++  L
Sbjct: 368 ASPNEVSS------DGTTPLAIAKRLGYISVTDVL 396

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 64.4 bits (158), Expect = 9e-11
 Identities = 26/95 (27%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           + + +  LH+AA  G+    K  +     +N +     T LH AA  G    V +LL   
Sbjct: 44  NVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN 103

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A P L T          TP  +A+  GH      L
Sbjct: 104 ANPNLATT------AGHTPLHIAAREGHVETVLAL 132

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 64.1 bits (157), Expect = 1e-10
 Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G   LH+AA  G+   +   +    S       G+T LH AA  G+ +   +LL   
Sbjct: 110 TTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERD 169

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A       P+       TP  +A  + +  I   L
Sbjct: 170 A------HPNAAGKNGLTPLHVAVHHNNLDIVKLL 198

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 64.1 bits (157), Expect = 1e-10
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +  G   LHL A  G+       +  GV ++     G+T LH A++ G  K V  LL   
Sbjct: 275 NKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQ 334

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +  L  +P   A+  GH  I   L
Sbjct: 335 A------DVNAKTKLGYSPLHQAAQQGHTDIVTLL 363

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 63.3 bits (155), Expect = 2e-10
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
            + G   LH+A+ +G+   +K  +  G S N  ++   T LH AA  G  +    LL   
Sbjct: 11  GESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNK 70

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A               +TP   A+  GH  +   L
Sbjct: 71  AKVNAKAK------DDQTPLHCAARIGHTNMVKLL 99

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 63.3 bits (155), Expect = 2e-10
 Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +G   LHLAA  G+   +   ++   + N  + SG T LH  A  G      VL+  G
Sbjct: 242 SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG 301

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                         +  TP  +AS  G+  +  FL
Sbjct: 302 V------MVDATTRMGYTPLHVASHYGNIKLVKFL 330

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 62.9 bits (154), Expect = 3e-10
 Identities = 23/95 (24%), Positives = 35/95 (36%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G   LH+A        +K  +  G S +    +G+T LH AA   + +    LL  G
Sbjct: 176 GKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG 235

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            +    +          TP  LA+  GH  +   L
Sbjct: 236 GSANAESV------QGVTPLHLAAQEGHAEMVALL 264

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 62.5 bits (153), Expect = 3e-10
 Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G   LH+AA        +  +  G S N   + G T LH AA  G  + VA+LLS  
Sbjct: 209 AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQ 268

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A   L            TP  L +  GH  ++  L
Sbjct: 269 ANGNLGNK------SGLTPLHLVAQEGHVPVADVL 297

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 62.1 bits (152), Expect = 5e-10
 Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +G   LH+AA  G     +  +      N    +G T LH A +      V +LL  G
Sbjct: 143 TKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRG 202

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            +P              TP  +A+      ++  L
Sbjct: 203 GSPHSPAW------NGYTPLHIAAKQNQVEVARSL 231

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 54.8 bits (133), Expect = 1e-07
 Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 722 GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSN 781
           G+S      SG T LH A++ G    V  LL  GA       P+       TP  +A+  
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGA------SPNVSNVKVETPLHMAARA 57

Query: 782 GHKGISGFL 790
           GH  ++ +L
Sbjct: 58  GHTEVAKYL 66

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score = 50.6 bits (122), Expect = 2e-06
 Identities = 16/61 (26%), Positives = 20/61 (32%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G   LH AA  G+   +   +  G S N     G T L  A   G      VL  + 
Sbjct: 341 TKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVT 400

Query: 756 A 756
            
Sbjct: 401 D 401

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 61.6 bits (151), Expect = 4e-11
 Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   L LAA  G+   ++  +  G  +N  D+ G T LH AA  G  + V VLL  G
Sbjct: 77  DHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A        G            +T  D++  NG++ ++  L
Sbjct: 137 ADVNAQDKFG------------KTAFDISIDNGNEDLAEIL 165

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 57.4 bits (140), Expect = 1e-09
 Identities = 32/95 (33%), Positives = 41/95 (43%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   LHLAA  G+   ++  +  G  +N  D +G T L  AA  G  + V VLL  G
Sbjct: 44  DASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNG 103

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D +       TP  LA+  GH  I   L
Sbjct: 104 A------DVNANDMEGHTPLHLAAMFGHLEIVEVL 132

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 55.8 bits (136), Expect = 4e-09
 Identities = 32/94 (34%), Positives = 39/94 (41%), Gaps = 18/94 (19%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 758
           L  AA  G D  ++  +  G  +N  D SGWT LH AA+ G  + V VLL  GA      
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77

Query: 759 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             G             TP  LA+  GH  I   L
Sbjct: 78  HAG------------MTPLRLAALFGHLEIVEVL 99

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 49.7 bits (120), Expect = 6e-07
 Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 8/62 (12%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           D EG   LHLAA  G+       V      G  +N +D  G TA   +   G E    +L
Sbjct: 110 DMEGHTPLHLAAMFGH----LEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEIL 165

Query: 752 LS 753
             
Sbjct: 166 QK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 41.2 bits (98), Expect = 4e-04
 Identities = 19/65 (29%), Positives = 24/65 (36%), Gaps = 18/65 (27%)

Query: 732 GWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKG 785
               L  AA  GR+  V +L++ GA        G             TP  LA+ NGH  
Sbjct: 14  LGKKLLEAARAGRDDEVRILMANGADVNAEDASG------------WTPLHLAAFNGHLE 61

Query: 786 ISGFL 790
           I   L
Sbjct: 62  IVEVL 66

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 60.5 bits (148), Expect = 5e-11
 Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D+ G   L+LA + G+   ++  +  G  +N  D  G+T LH AA+ G  +   VLL  G
Sbjct: 44  DEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHG 103

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + +    +T  D++  NG++ ++  L
Sbjct: 104 A------DVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 52.8 bits (128), Expect = 2e-08
 Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 18/94 (19%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 758
           L  AA  G D  ++  +  G  +N +D  G T L+ A   G  + V VLL  GA      
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77

Query: 759 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             G             TP  LA+  GH  I+  L
Sbjct: 78  AIG------------FTPLHLAAFIGHLEIAEVL 99

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 50.1 bits (121), Expect = 2e-07
 Identities = 17/58 (29%), Positives = 25/58 (43%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 753
           D  G   LHLAA +G+    +  +  G  +N +D  G TA   +   G E    +L  
Sbjct: 77  DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 40.1 bits (95), Expect = 6e-04
 Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 18/65 (27%)

Query: 732 GWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKG 785
               L  AA  G++  V +L++ GA        G             TP  LA+++GH  
Sbjct: 14  LGKKLLEAARAGQDDEVRILMANGADVNAKDEYG------------LTPLYLATAHGHLE 61

Query: 786 ISGFL 790
           I   L
Sbjct: 62  IVEVL 66

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 62.4 bits (153), Expect = 7e-11
 Identities = 23/97 (23%), Positives = 33/97 (34%), Gaps = 18/97 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D+E    LH AA  G     +  + A   ++  ++ G + LH AA   R   V + LS  
Sbjct: 141 DNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRD 200

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 786
           +        G             TP   AS N     
Sbjct: 201 SDVTLKNKEG------------ETPLQCASLNSQVWS 225

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 61.3 bits (150), Expect = 2e-10
 Identities = 26/102 (25%), Positives = 38/102 (37%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
            ++ +  L  AA   +  A+K  + AG  ++ +D  G T LH AA  G  + V  LLS G
Sbjct: 41  SEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNG 100

Query: 756 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                     G             TP   A+   H  +   L
Sbjct: 101 QMDVNCQDDGG------------WTPMIWATEYKHVDLVKLL 130

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 61.3 bits (150), Expect = 2e-10
 Identities = 24/101 (23%), Positives = 33/101 (32%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
               +  LH AA  G+       V AG +I+       T L  AA     + V  L+  G
Sbjct: 8   HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG 67

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A        G             T   LA+  GH  +  +L
Sbjct: 68  ALVDPKDAEG------------STCLHLAAKKGHYEVVQYL 96

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 59.7 bits (146), Expect = 6e-10
 Identities = 21/95 (22%), Positives = 32/95 (33%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD G   +  A    +   +K  ++ G  IN RD      LHWAA+ G      +LL+  
Sbjct: 108 DDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK 167

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                  D         +P  +A+           
Sbjct: 168 C------DLHAVNIHGDSPLHIAARENRYDCVVLF 196

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 56.7 bits (138), Expect = 6e-09
 Identities = 26/102 (25%), Positives = 40/102 (39%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSL 754
           D EG   LHLAA  G+   ++  ++ G + +N +D  GWT + WA        V +LLS 
Sbjct: 74  DAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSK 133

Query: 755 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           G+                           A+ +G   I+  L
Sbjct: 134 GSDINIRDNEE------------NICLHWAAFSGCVDIAEIL 163

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 49.7 bits (120), Expect = 1e-06
 Identities = 10/65 (15%), Positives = 19/65 (29%), Gaps = 8/65 (12%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           +  G   LH+AA           V         +  ++  G T L  A+   +  +   +
Sbjct: 174 NIHGDSPLHIAARENR----YDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQM 229

Query: 752 LSLGA 756
                
Sbjct: 230 SKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 48.9 bits (118), Expect = 2e-06
 Identities = 15/68 (22%), Positives = 25/68 (36%), Gaps = 6/68 (8%)

Query: 723 VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNG 782
           ++      +  + LH AA  G      +L+  GA     ++        RTP   A+ N 
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSE------DQRTPLMEAAENN 55

Query: 783 HKGISGFL 790
           H     +L
Sbjct: 56  HLEAVKYL 63

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 61.3 bits (150), Expect = 8e-11
 Identities = 26/108 (24%), Positives = 40/108 (37%), Gaps = 15/108 (13%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G+  L  +   GY       +  G ++N R+L G T L  A+  GR + V  LL LG
Sbjct: 98  DFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG 157

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLK 803
           A      D S       T    A   G + +     +     +   ++
Sbjct: 158 A------DISARDLTGLTAEASARIFGRQEV----IK-----IFTEVR 190

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 59.3 bits (145), Expect = 4e-10
 Identities = 19/103 (18%), Positives = 26/103 (25%), Gaps = 24/103 (23%)

Query: 694 ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 753
            +D  G+ V  +                    N+RD    T L  A   G E  +  L+ 
Sbjct: 3   HMDKNGEIVEKIKDEKSI------NQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVE 56

Query: 754 LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                      G             T    A  N   GI+  L
Sbjct: 57  NFDKLEDKDIEG------------STALIWAVKNNRLGIAEKL 87

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 57.8 bits (141), Expect = 1e-09
 Identities = 26/101 (25%), Positives = 35/101 (34%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D EG   L  A         +  ++ G ++N +D SG T L W+   G  +    LL  G
Sbjct: 65  DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHG 124

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A        G             TP  +AS  G   I   L
Sbjct: 125 ANVNDRNLEG------------ETPLIVASKYGRSEIVKKL 153

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 57.0 bits (139), Expect = 3e-09
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D   +  L +A  LG + AI   V     +  +D+ G TAL WA    R      LLS G
Sbjct: 32  DSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKG 91

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           +        G            +TP   +   G+  +S FL
Sbjct: 92  SNVNTKDFSG------------KTPLMWSIIFGYSEMSYFL 120

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 53.2 bits (129), Expect = 5e-08
 Identities = 18/66 (27%), Positives = 29/66 (43%), Gaps = 8/66 (12%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           + EG+  L +A+  G        V      G  I+ RDL+G TA   A   GR++ + + 
Sbjct: 131 NLEGETPLIVASKYGR----SEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIF 186

Query: 752 LSLGAA 757
             +  A
Sbjct: 187 TEVRRA 192

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 60.5 bits (148), Expect = 9e-11
 Identities = 24/102 (23%), Positives = 35/102 (34%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G  V+H AA  G+   ++  +     +N  D  G   LH AA  G  + V  L+   
Sbjct: 67  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 126

Query: 756 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A+        G             T  DLA   G   +   +
Sbjct: 127 ASNVGHRNHKG------------DTACDLARLYGRNEVVSLM 156

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 56.2 bits (137), Expect = 2e-09
 Identities = 24/95 (25%), Positives = 38/95 (40%), Gaps = 7/95 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +  G+  L     LG     +  +  G + + +D +G+  +H AA  G   T+  LL   
Sbjct: 35  NGFGRTALQ-VMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ 93

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A      D + E      P  LA+  GH  +  FL
Sbjct: 94  A------DVNIEDNEGNLPLHLAAKEGHLRVVEFL 122

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 54.3 bits (132), Expect = 1e-08
 Identities = 20/102 (19%), Positives = 31/102 (30%), Gaps = 19/102 (18%)

Query: 695 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 754
           + +     L  AA+ G    +   +   V++N ++  G TAL      G  +    LL  
Sbjct: 1   MAEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLR 59

Query: 755 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA P      G                  A+  G       L
Sbjct: 60  GANPDLKDRTG------------FAVIHDAARAGFLDTLQTL 89

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 53.9 bits (131), Expect = 2e-08
 Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 1/63 (1%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLSL 754
           D+EG   LHLAA  G+   ++  V     ++  R+  G TA   A   GR + V+++ + 
Sbjct: 100 DNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 159

Query: 755 GAA 757
           GA 
Sbjct: 160 GAG 162

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 64.1 bits (157), Expect = 9e-11
 Identities = 15/119 (12%), Positives = 37/119 (31%), Gaps = 11/119 (9%)

Query: 696 DDEGQGVLHLAASLGYDWAIK-----PTVTAGVSINFRDLSGWTALHWAAYCGREKTVAV 750
           D   +  L  A       A+          + + +++ +  G + LHWA     E     
Sbjct: 170 DKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMR 229

Query: 751 LLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD 809
            + +G    +  +          P  L+       ++  L + +   L+ +   ++   
Sbjct: 230 FVEMGIDVNMEDN------EHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTT 282

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 62.2 bits (152), Expect = 3e-10
 Identities = 28/118 (23%), Positives = 40/118 (33%), Gaps = 20/118 (16%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DDE    +H+AA  G    ++  +  GVS   ++  G TALH A   G   T   L S+G
Sbjct: 17  DDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVG 76

Query: 756 AAP----GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL----AESSLTSLLLSLKMN 805
                  G            + P  LA       +   L     E       L  + +
Sbjct: 77  EVHSLWHG------------QKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECD 122

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 60.7 bits (148), Expect = 9e-10
 Identities = 16/97 (16%), Positives = 28/97 (28%), Gaps = 14/97 (14%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +  G   LHLA   G     K   + G   +     G   +H A    +   V  L+   
Sbjct: 50  NRFGCTALHLACKFGCVDTAKYLASVGEVHSLWH--GQKPIHLAVMANKTDLVVALVEGA 107

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
              G            + P  L +    + ++   + 
Sbjct: 108 KERG------------QMPESLLNECDEREVNEIGSH 132

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 58.0 bits (141), Expect = 7e-09
 Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 14/97 (14%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE--KTVAVLLS 753
            + GQ    L                 +  + +   G TALHW    G E  + + +L+ 
Sbjct: 108 KERGQMPESLLNECDE------REVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQ 161

Query: 754 LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           LGA       P+ +     TP   A    ++     +
Sbjct: 162 LGA------SPTAKDKADETPLMRAMEFRNREALDLM 192

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 57.2 bits (139), Expect = 1e-08
 Identities = 6/70 (8%), Positives = 14/70 (20%)

Query: 687 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 746
            +G             +  AA       ++        +     +G              
Sbjct: 278 HNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPA 337

Query: 747 TVAVLLSLGA 756
              + L+  A
Sbjct: 338 VKRMKLAPSA 347

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 54.9 bits (133), Expect = 8e-08
 Identities = 14/110 (12%), Positives = 30/110 (27%), Gaps = 29/110 (26%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
             +GQ  LH    LG ++     +      G S   +D +  T L  A      + + ++
Sbjct: 135 HCKGQTALHWCVGLGPEY--LEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLM 192

Query: 752 LSLGAAP-----------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           +    +            G             +    A     + ++   
Sbjct: 193 MDTVPSKSSLRLDYANKQG------------NSHLHWAILINWEDVAMRF 230

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 51.8 bits (125), Expect = 7e-07
 Identities = 18/91 (19%), Positives = 27/91 (29%), Gaps = 15/91 (16%)

Query: 721 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 780
             ++    D      +H AA  G+   V  L+  G +P +            T   LA  
Sbjct: 9   PKLNRIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNR------FGCTALHLACK 62

Query: 781 NGHKGISGFLAESSLTSLLLSLKMNDSADDG 811
            G        A+      L S+    S   G
Sbjct: 63  FGCVDT----AK-----YLASVGEVHSLWHG 84

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score = 51.4 bits (124), Expect = 9e-07
 Identities = 9/108 (8%), Positives = 26/108 (24%), Gaps = 19/108 (17%)

Query: 696 DDEGQGVLHLAA------------SLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYC 742
           D+E    L+L+                  + I+      G ++    +     +  AA  
Sbjct: 241 DNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADP 300

Query: 743 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            +++ + +L           +           +          +    
Sbjct: 301 SKQEVLQLLQEKLD------EVVRSLNTGAGGAVKRKKKAAPAVKRMK 342

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 62.1 bits (152), Expect = 1e-10
 Identities = 26/95 (27%), Positives = 32/95 (33%), Gaps = 5/95 (5%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD     +  A   G     +  V AG  +   D    T LHWAA   R   V   +S G
Sbjct: 6   DDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG 65

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A    L       PL       A+  GH  +   L
Sbjct: 66  AIVDQLGGDLNSTPLH-----WATRQGHLSMVVQL 95

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 60.9 bits (149), Expect = 2e-10
 Identities = 27/126 (21%), Positives = 38/126 (30%), Gaps = 35/126 (27%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRD-LSGWTALHWAAYCGREKTVAV 750
           D  G   L  AA   +            T  VS+N  D     TALHWA   G    +++
Sbjct: 139 DQNGMTPLMWAAYRTHS---VDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISL 195

Query: 751 LLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKM 804
           LL  GA        G             +  DLA    +  +          + L   + 
Sbjct: 196 LLEAGANVDAQNIKG------------ESALDLAKQRKNVWM---------INHLQEARQ 234

Query: 805 NDSADD 810
               D+
Sbjct: 235 AKGYDN 240

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 57.8 bits (141), Expect = 3e-09
 Identities = 24/96 (25%), Positives = 36/96 (37%), Gaps = 6/96 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK-TVAVLLSL 754
           D EG   +HLAA  G+   +   +  G  ++  D +G T L WAAY         +LL+ 
Sbjct: 106 DGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF 165

Query: 755 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             +  L            T    A   G+  +   L
Sbjct: 166 NVSVNLGDKYH-----KNTALHWAVLAGNTTVISLL 196

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 55.9 bits (136), Expect = 1e-08
 Identities = 22/93 (23%), Positives = 29/93 (31%), Gaps = 14/93 (15%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
            D     LH A   G+       V      G   +  D  G + +H AA  G    VA L
Sbjct: 73  GDLNSTPLHWATRQGH----LSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYL 128

Query: 752 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 784
           ++ G       D         TP   A+   H 
Sbjct: 129 IAKGQ------DVDMMDQNGMTPLMWAAYRTHS 155

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 46.7 bits (112), Expect = 1e-05
 Identities = 8/72 (11%), Positives = 15/72 (20%), Gaps = 18/72 (25%)

Query: 725 INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLA 778
           +   D      +  A   G  +    L+  G                       T    A
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN------------VTLLHWA 49

Query: 779 SSNGHKGISGFL 790
           + N    +  + 
Sbjct: 50  AINNRIDLVKYY 61

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 63.8 bits (156), Expect = 1e-10
 Identities = 25/103 (24%), Positives = 37/103 (35%), Gaps = 14/103 (13%)

Query: 696 DDEGQGVLHLAASLGY--------DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT 747
               + VLH  AS               K  + AG  +N  D    T L  A    R + 
Sbjct: 122 PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRL 181

Query: 748 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           VA L+  GA      DP+      R+    A++N   G+  ++
Sbjct: 182 VAYLMKAGA------DPTIYNKSERSALHQAAANRDFGMMVYM 218

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 62.7 bits (153), Expect = 2e-10
 Identities = 25/106 (23%), Positives = 36/106 (33%), Gaps = 27/106 (25%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 750
             +G+  LH AA +       P V       G + + +D  G T +  AA  GR + V  
Sbjct: 276 KYKGRTALHYAAQVSN----MPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMY 331

Query: 751 LLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           L+  GA+                     T   LA +N H  I    
Sbjct: 332 LIQQGASVEAVDATD------------HTARQLAQANNHHNIVDIF 365

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 54.6 bits (132), Expect = 9e-08
 Identities = 21/107 (19%), Positives = 32/107 (29%), Gaps = 16/107 (14%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV-------TAGVSINFRDLSGWTALHWAAYCGREKTV 748
           +   +  LH AA+          +            I   D +G TAL   A+      V
Sbjct: 196 NKSERSALHQAAANRD----FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQV 251

Query: 749 AV---LLSLGAAPGLLTDPSPEFPLS--RTPSDLASSNGHKGISGFL 790
           A    L+  GA          +      RT    A+   +  I  +L
Sbjct: 252 ASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYL 298

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 53.8 bits (130), Expect = 2e-07
 Identities = 14/110 (12%), Positives = 19/110 (17%), Gaps = 18/110 (16%)

Query: 695 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSL 754
           L              G D+      T        +      LH  A  G       +   
Sbjct: 57  LQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRE 115

Query: 755 GAAP-----GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLL 799
                                 RT     +SN     S  L        +
Sbjct: 116 SVNIIDPRHN------------RTVLHWIASNSSAEKSEDLIVHEAKECI 153

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 53.8 bits (130), Expect = 2e-07
 Identities = 17/100 (17%), Positives = 28/100 (28%), Gaps = 21/100 (21%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS-- 753
           D +    L LA        +   + AG      + S  +ALH AA       +  +L+  
Sbjct: 163 DCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNST 222

Query: 754 -LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 786
            L          G             T   + + N  +  
Sbjct: 223 KLKGDIEELDRNG------------MTALMIVAHNEGRDQ 250

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 52.6 bits (127), Expect = 3e-07
 Identities = 13/61 (21%), Positives = 22/61 (36%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D++G+  + LAA  G    +   +  G S+   D +  TA   A        V +     
Sbjct: 310 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCR 369

Query: 756 A 756
            
Sbjct: 370 P 370

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 50.7 bits (122), Expect = 1e-06
 Identities = 23/113 (20%), Positives = 35/113 (30%), Gaps = 30/113 (26%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPT---VTAGVSINFR--------DLSGWTALHWAAYCGR 744
           D  G   L + A       +      V  G  +++            G TALH+AA    
Sbjct: 232 DRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSN 291

Query: 745 EKTVAVLLS-LGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
              V  L+   G+        G            +TP  LA+  G   +  +L
Sbjct: 292 MPIVKYLVGEKGSNKDKQDEDG------------KTPIMLAAQEGRIEVVMYL 332

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 62.6 bits (153), Expect = 1e-10
 Identities = 17/89 (19%), Positives = 27/89 (30%), Gaps = 6/89 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
              G+  LHLA        ++  + AG     R   G T L  A          +L + G
Sbjct: 189 PTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHG 248

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHK 784
           A          +     +P   + S+   
Sbjct: 249 A------PEPEDGGDKLSPCSSSGSDSDS 271

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 60.3 bits (147), Expect = 8e-10
 Identities = 20/102 (19%), Positives = 30/102 (29%), Gaps = 8/102 (7%)

Query: 691 GPCILDDEGQGVLHLAASLGYDWAIKPT-VTAGVSINFRDLSGWTALHWAAYCGREKTVA 749
                 D       + +    +   +P      + +   +  G T LH A      + V 
Sbjct: 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVR 175

Query: 750 VLLSLGAAPGLLTDP-SPEFPLSRTPSDLASSNGHKGISGFL 790
           +L   GA      D   PE    RTP  LA       +   L
Sbjct: 176 LLRDAGA------DLNKPEPTCGRTPLHLAVEAQAASVLELL 211

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 59.9 bits (146), Expect = 1e-09
 Identities = 25/103 (24%), Positives = 33/103 (32%), Gaps = 8/103 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +D GQ  LHLAA LG    ++    AG  +   +  G TALH A          VLL   
Sbjct: 42  NDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPR 101

Query: 756 AAPGL-LTDPSPEFPLSRTPSDL-------ASSNGHKGISGFL 790
            +     +D         TP          +  N         
Sbjct: 102 PSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRD 144

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 58.7 bits (143), Expect = 2e-09
 Identities = 34/169 (20%), Positives = 52/169 (30%), Gaps = 32/169 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAG---VSINFRDLSGWTALHWAAYCGREKTVAVLL 752
            ++G   LHLA    ++  +   +        ++ ++  G TALH AA  G   TV  L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 753 SLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMND 806
           + GA        G             T   LA            A      +LL  + + 
Sbjct: 66  AAGAGVLVAERGG------------HTALHLACRVRAHTC----AC-----VLLQPRPSH 104

Query: 807 SAD--DGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNA 853
             D  D  L  S      T     A  +  N E++     +       A
Sbjct: 105 PRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEA 153

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 57.9 bits (141), Expect = 4e-09
 Identities = 23/102 (22%), Positives = 35/102 (34%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSL 754
           + +G   LH+A        ++    AG  +N  +   G T LH A        + +LL  
Sbjct: 155 NYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA 214

Query: 755 GAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA P      G            RTP   A    +  ++  L
Sbjct: 215 GADPTARMYGG------------RTPLGSALLRPNPILARLL 244

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 49.1 bits (118), Expect = 3e-06
 Identities = 16/66 (24%), Positives = 21/66 (31%), Gaps = 3/66 (4%)

Query: 725 INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 784
             +    G TALH A     E  +  LL   A    L   +      +T   LA+  G  
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL---GQTALHLAAILGEA 58

Query: 785 GISGFL 790
                L
Sbjct: 59  STVEKL 64

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 42.5 bits (101), Expect = 4e-04
 Identities = 4/53 (7%), Positives = 8/53 (15%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTV 748
              G+  L  A         +     G           +    +         
Sbjct: 222 MYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNR 274

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 61.0 bits (148), Expect = 2e-10
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D + +  LH A S G+   ++  +  GV +N +D +GW+ LH AA  G ++ V  LL  G
Sbjct: 37  DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKG 96

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
           A        +       TP   A+S     I+  L E
Sbjct: 97  A------HVNAVNQNGCTPLHYAASKNRHEIAVMLLE 127

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 56.4 bits (136), Expect = 8e-09
 Identities = 29/97 (29%), Positives = 44/97 (45%), Gaps = 6/97 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           DD G   LH+AAS G D  +K  +  G  +N  + +G T LH+AA   R +   +LL  G
Sbjct: 70  DDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 129

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
           A      +P  +     T    A++ G+  +   L  
Sbjct: 130 A------NPDAKDHYDATAMHRAAAKGNLKMVHILLF 160

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 54.9 bits (132), Expect = 3e-08
 Identities = 17/54 (31%), Positives = 21/54 (38%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
            +LA S   D   +  +         D    TALHWA   G  + V  LL LG 
Sbjct: 11  CNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGV 64

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 54.1 bits (130), Expect = 5e-08
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 6/110 (5%)

Query: 681 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 740
           +++ +   G     ++  G   LH AAS          +  G + + +D    TA+H AA
Sbjct: 88  IVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAA 147

Query: 741 YCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             G  K V +LL   A        + +     TP  LA        + FL
Sbjct: 148 AKGNLKMVHILLFYKA------STNIQDTEGNTPLHLACDEERVEEAKFL 191

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 49.1 bits (117), Expect = 2e-06
 Identities = 23/95 (24%), Positives = 34/95 (35%), Gaps = 8/95 (8%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D      +H AA+ G    +   +    S N +D  G T LH A    R +    L++ G
Sbjct: 136 DHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQG 195

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A          E    +TP  +A   G  G+    
Sbjct: 196 A------SIYIENKEEKTPLQVAK--GGLGLILKR 222

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 60.9 bits (149), Expect = 2e-10
 Identities = 24/102 (23%), Positives = 36/102 (35%), Gaps = 19/102 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
            ++G   LHLA    +    +  +  G S+  +D      LH AA  G  K + +L  LG
Sbjct: 104 TNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG 163

Query: 756 AAP-------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            +        G             TP   A + GH   +  L
Sbjct: 164 KSAVNWQDKQG------------WTPLFHALAEGHGDAAVLL 193

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 59.8 bits (146), Expect = 5e-10
 Identities = 22/101 (21%), Positives = 32/101 (31%), Gaps = 16/101 (15%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV------TAGVSINFRDLSGWTALHWAAYCGREKTVA 749
           DD G    H+A S+G        V           +N     G T LH A      +   
Sbjct: 69  DDSGWTPFHIACSVGN----LEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 124

Query: 750 VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            L+  GA          +   ++ P   A+S G   +   L
Sbjct: 125 FLIENGA------SVRIKDKFNQIPLHRAASVGSLKLIELL 159

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 57.8 bits (141), Expect = 2e-09
 Identities = 19/89 (21%), Positives = 30/89 (33%), Gaps = 4/89 (4%)

Query: 703 LHLAASLG-YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLL 761
           LH A     +    +   +    +  +D  G   LHW+      +  + LLS      L 
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65

Query: 762 TDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             P        TP  +A S G+  +   L
Sbjct: 66  DYPDDS---GWTPFHIACSVGNLEVVKSL 91

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 53.2 bits (129), Expect = 8e-08
 Identities = 24/106 (22%), Positives = 33/106 (31%), Gaps = 23/106 (21%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDL---SGWTALHWAAYCGREKTVAVLL 752
           D +G+  LH + S          ++   ++N  D    SGWT  H A   G  + V  L 
Sbjct: 33  DQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY 92

Query: 753 SLGAAP--------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                P        G             T   LA       +S FL
Sbjct: 93  DRPLKPDLNKITNQG------------VTCLHLAVGKKWFEVSQFL 126

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score = 49.8 bits (120), Expect = 1e-06
 Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVS-INFRDLSGWTALHWAAYCGREKTVAVLLSL 754
           D   Q  LH AAS+G    I+     G S +N++D  GWT L  A   G      +L+  
Sbjct: 137 DKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEK 196

Query: 755 GAA 757
             A
Sbjct: 197 YGA 199

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 59.0 bits (144), Expect = 3e-10
 Identities = 14/84 (16%), Positives = 25/84 (29%), Gaps = 11/84 (13%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762
           +H AA  G+   +     AG  ++ RD  G   +  A   G       L +         
Sbjct: 82  VHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAG------ 135

Query: 763 DPSPEFPLSRTPSDLASSNGHKGI 786
                       + + ++ G   I
Sbjct: 136 GTR-----GSNHARIDAAEGPSDI 154

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 57.9 bits (141), Expect = 7e-10
 Identities = 18/95 (18%), Positives = 31/95 (32%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
            +     L  AA+ G    ++  + AG + N  +  G   +      G  +   +LL  G
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMM-GSARVAELLLLHG 67

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A P      +   P+       A+  G       L
Sbjct: 68  AEPNCADPATLTRPVH-----DAAREGFLDTLVVL 97

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 57.5 bits (140), Expect = 1e-09
 Identities = 23/96 (23%), Positives = 38/96 (39%), Gaps = 8/96 (8%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT-ALHWAAYCGREKTVAVLLSL 754
           +  G+  + +   +G     +  +  G   N  D +  T  +H AA  G   T+ VL   
Sbjct: 42  NSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

Query: 755 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA   +           R P DLA   GH+ ++ +L
Sbjct: 101 GARLDVRDA------WGRLPVDLAEELGHRDVARYL 130

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 42.8 bits (102), Expect = 1e-04
 Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 4/38 (10%)

Query: 721 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 758
           AG S+          L  AA  GR + V  LL  GA P
Sbjct: 5   AGSSME----PSADWLATAAARGRVEEVRALLEAGANP 38

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 59.0 bits (144), Expect = 3e-10
 Identities = 23/105 (21%), Positives = 35/105 (33%), Gaps = 27/105 (25%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           D  G   +H AA  G+      T+      G  +N  D +G   +H A   G    V+ L
Sbjct: 65  DTSGTSPVHDAARTGF----LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFL 120

Query: 752 LSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            +  +        G             TP +LA   G + +   L
Sbjct: 121 AA-ESDLHRRDARG------------LTPLELALQRGAQDLVDIL 152

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 57.8 bits (141), Expect = 8e-10
 Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 7/97 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +  G+  L +    G        +  G S N +D SG + +H AA  G   T+ VL+  G
Sbjct: 33  NRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHG 91

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
           A      D +        P  LA   GH  +  FLA 
Sbjct: 92  A------DVNVPDGTGALPIHLAVQEGHTAVVSFLAA 122

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 55.5 bits (135), Expect = 4e-09
 Identities = 20/95 (21%), Positives = 30/95 (31%), Gaps = 20/95 (21%)

Query: 703 LHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP--- 758
           L  AA+ G    ++  +    V  +  +  G TAL    + G       LL  GA+P   
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQ 64

Query: 759 ---GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
              G             +P   A+  G       L
Sbjct: 65  DTSG------------TSPVHDAARTGFLDTLKVL 87

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 51.3 bits (124), Expect = 1e-07
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 7/61 (11%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVT---AGVSINFRDLSGWTALHWAAYCGREKTVAVLL 752
           D  G   +HLA   G+       V+   A   ++ RD  G T L  A   G +  V +L 
Sbjct: 98  DGTGALPIHLAVQEGH----TAVVSFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

Query: 753 S 753
            
Sbjct: 154 G 154

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 60.2 bits (147), Expect = 3e-10
 Identities = 17/91 (18%), Positives = 30/91 (32%), Gaps = 6/91 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             E   +L  A         +        ++  D  G T L+ A +    +    L+  G
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRG 62

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
           A      D + +  +S +P   A + G   I
Sbjct: 63  A------DINLQNSISDSPYLYAGAQGRTEI 87

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 58.6 bits (143), Expect = 1e-09
 Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 5/91 (5%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D EG   L++A         K  +  G  IN ++    +   +A   GR + +A +L   
Sbjct: 36  DTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHA 95

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
                  D +            A+  GH   
Sbjct: 96  TP-----DLNKHNRYGGNALIPAAEKGHIDN 121

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 51.7 bits (125), Expect = 2e-07
 Identities = 27/111 (24%), Positives = 38/111 (34%), Gaps = 32/111 (28%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAG-VSINFRDLSGWTALHWAAYC-----GRE 745
           +  G   L  AA  G+       V      G   I+F++  G+TAL  A          +
Sbjct: 103 NRYGGNALIPAAEKGH----IDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQ 158

Query: 746 KTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             V +L+  GA        G            RT  D A+  G+  IS  L
Sbjct: 159 DIVKLLMENGADQSIKDNSG------------RTAMDYANQKGYTEISKIL 197

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 51.7 bits (125), Expect = 2e-07
 Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 9/67 (13%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 750
           +         A + G        +      A   +N  +  G  AL  AA  G    V +
Sbjct: 69  NSISDSPYLYAGAQGR----TEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKL 124

Query: 751 LLSLGAA 757
           LL  G  
Sbjct: 125 LLEDGRE 131

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 47.4 bits (114), Expect = 5e-06
 Identities = 14/63 (22%), Positives = 23/63 (36%), Gaps = 5/63 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVT-----AGVSINFRDLSGWTALHWAAYCGREKTVAV 750
           +D G   L  A  L     +   +       G   + +D SG TA+ +A   G  +   +
Sbjct: 137 NDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKI 196

Query: 751 LLS 753
           L  
Sbjct: 197 LAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 42.8 bits (102), Expect = 2e-04
 Identities = 11/69 (15%), Positives = 17/69 (24%), Gaps = 18/69 (26%)

Query: 728 RDLSGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSN 781
           +       L  A     +K   +L             G             TP ++A  N
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEG------------NTPLNIAVHN 49

Query: 782 GHKGISGFL 790
               I+  L
Sbjct: 50  NDIEIAKAL 58

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 60.4 bits (147), Expect = 3e-10
 Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 7/99 (7%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           ++EG   LH A        +   +TAG ++N  D  GWT LH AA C        L+  G
Sbjct: 51  NEEGITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHG 110

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASS--NGHKGISGFLAE 792
           AA    T          T  +       G+   + +LA+
Sbjct: 111 AAIFATTLSD-----GATAFEKCDPYREGYADCATYLAD 144

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 56.5 bits (137), Expect = 8e-09
 Identities = 21/92 (22%), Positives = 31/92 (33%), Gaps = 6/92 (6%)

Query: 699 GQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 758
              +L  AA  G    ++  V      +  +  G TALH A        V  L++ GA  
Sbjct: 21  PLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGA-- 78

Query: 759 GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
               + +       TP   A+S     I   L
Sbjct: 79  ----NVNSPDSHGWTPLHCAASCNDTVICMAL 106

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 44.6 bits (106), Expect = 6e-05
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 2/63 (3%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +      L   ++  +   +       V++  RD    T   WAA  G+E  V      G
Sbjct: 153 NSGAVYALWDYSA-EFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNY-FG 210

Query: 756 AAP 758
             P
Sbjct: 211 LFP 213

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 41.9 bits (99), Expect = 5e-04
 Identities = 14/94 (14%), Positives = 24/94 (25%), Gaps = 11/94 (11%)

Query: 696 DDEGQGVLHLAASL--GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 753
             +G            GY            S+   +     AL   +    E    +   
Sbjct: 118 LSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYS---AEFGDELSFR 174

Query: 754 LGAAPGLLT-DPSPEFPLSRTPSDLASSNGHKGI 786
            G +  +L  D         T    A+ +G +G 
Sbjct: 175 EGESVTVLRRDGP-----EETDWWWAALHGQEGY 203

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 57.4 bits (140), Expect = 4e-10
 Identities = 32/101 (31%), Positives = 41/101 (40%), Gaps = 18/101 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +G   LH AA  G+   +K  ++ G  +N R   G T LH AA  G  + V +LL+ G
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKG 65

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A        G             TP  LA  NGH  I   L
Sbjct: 66  ADVNARSKDG------------NTPEHLAKKNGHHEIVKLL 94

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 52.8 bits (128), Expect = 2e-08
 Identities = 20/61 (32%), Positives = 28/61 (45%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +G   LHLAA  G+   +K  +  G  +N R   G T  H A   G  + V +L + G
Sbjct: 39  SKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKG 98

Query: 756 A 756
           A
Sbjct: 99  A 99

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 45.8 bits (110), Expect = 5e-06
 Identities = 25/75 (33%), Positives = 28/75 (37%), Gaps = 20/75 (26%)

Query: 722 GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPS 775
           G     +D  G T LH AA  G  + V  LLS GA        G             TP 
Sbjct: 1   GHMWGSKD--GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDG------------NTPL 46

Query: 776 DLASSNGHKGISGFL 790
            LA+ NGH  I   L
Sbjct: 47  HLAAKNGHAEIVKLL 61

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 57.0 bits (139), Expect = 7e-10
 Identities = 34/101 (33%), Positives = 43/101 (42%), Gaps = 26/101 (25%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           D  G+  LHLAA  G+       V     AG  +N +D +G T LH AA  G  + V +L
Sbjct: 32  DKNGRTPLHLAARNGH----LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLL 87

Query: 752 LSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGI 786
           L  GA        G            RTP  LA+ NGH  +
Sbjct: 88  LEAGADVNAKDKNG------------RTPLHLAARNGHLEV 116

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 56.6 bits (138), Expect = 9e-10
 Identities = 33/94 (35%), Positives = 43/94 (45%), Gaps = 18/94 (19%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 758
           LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  GA      
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65

Query: 759 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             G            RTP  LA+ NGH  +   L
Sbjct: 66  KNG------------RTPLHLAARNGHLEVVKLL 87

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 54.3 bits (132), Expect = 5e-09
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G+  LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  G
Sbjct: 65  DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 124

Query: 756 A 756
           A
Sbjct: 125 A 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 45.4 bits (109), Expect = 7e-06
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 18/62 (29%)

Query: 731 SGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHK 784
           +G T LH AA  G  + V +LL  GA        G            RTP  LA+ NGH 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG------------RTPLHLAARNGHL 48

Query: 785 GI 786
            +
Sbjct: 49  EV 50

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 55.8 bits (136), Expect = 7e-10
 Identities = 32/90 (35%), Positives = 42/90 (46%), Gaps = 18/90 (20%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 758
           LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  GA      
Sbjct: 6   LHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKD 65

Query: 759 --GLLTDPSPEFPLSRTPSDLASSNGHKGI 786
             G            RTP  LA+ NGH  +
Sbjct: 66  KNG------------RTPLHLAARNGHLEV 83

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 53.1 bits (129), Expect = 7e-09
 Identities = 25/61 (40%), Positives = 34/61 (55%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G+  LHLAA  G+   +K  + AG  +N +D +G T LH AA  G  + V +LL  G
Sbjct: 32  DKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAG 91

Query: 756 A 756
           A
Sbjct: 92  A 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 45.4 bits (109), Expect = 4e-06
 Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 18/62 (29%)

Query: 731 SGWTALHWAAYCGREKTVAVLLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHK 784
           +G T LH AA  G  + V +LL  GA        G            RTP  LA+ NGH 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG------------RTPLHLAARNGHL 48

Query: 785 GI 786
            +
Sbjct: 49  EV 50

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 56.7 bits (138), Expect = 1e-09
 Identities = 18/95 (18%), Positives = 29/95 (30%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
                  L  AA+ G    ++  + AG   N  +  G   +      G  +   +LL  G
Sbjct: 9   GGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHG 67

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A P      +   P+       A+  G       L
Sbjct: 68  AEPNCADPATLTRPVH-----DAAREGFLDTLVVL 97

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 55.1 bits (134), Expect = 4e-09
 Identities = 24/96 (25%), Positives = 37/96 (38%), Gaps = 8/96 (8%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT-ALHWAAYCGREKTVAVLLSL 754
           +  G+  + +    G     +  +  G   N  D +  T  +H AA  G   T+ VL   
Sbjct: 42  NRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA 100

Query: 755 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           GA   +           R P DLA   GH+ I+ +L
Sbjct: 101 GARLDVCDA------WGRLPVDLAEEQGHRDIARYL 130

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 54.0 bits (131), Expect = 1e-08
 Identities = 11/54 (20%), Positives = 18/54 (33%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
           +H AA  G+   +     AG  ++  D  G   +  A   G       L +   
Sbjct: 82  VHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 50.9 bits (123), Expect = 1e-07
 Identities = 12/36 (33%), Positives = 15/36 (41%)

Query: 721 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
               I+    S    L  AA  G+ +TV  LL  GA
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGA 36

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 59.5 bits (145), Expect = 2e-09
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 17/94 (18%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP---- 758
           LH AA+L     +K  + +G+  +  D  G TAL++A   G  +TV + +          
Sbjct: 66  LHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYG 125

Query: 759 --GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             G            +T    A       I  + 
Sbjct: 126 KTGW-----------KTSFYHAVMLNDVSIVSYF 148

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 57.9 bits (141), Expect = 4e-09
 Identities = 21/96 (21%), Positives = 33/96 (34%), Gaps = 8/96 (8%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGW-TALHWAAYCGREKTVAVLLSL 754
           DD+G   L+ A   G    +K  V     + F   +GW T+ + A        V+  LS 
Sbjct: 92  DDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSE 151

Query: 755 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
             +   L           +   +   NGH  +   L
Sbjct: 152 IPSTFDLAI-------LLSCIHITIKNGHVDMMILL 180

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 57.5 bits (140), Expect = 7e-09
 Identities = 19/101 (18%), Positives = 27/101 (26%), Gaps = 20/101 (19%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G    + A +      +   + AG   N  +      LH AA     K V +LL  G
Sbjct: 28  DVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSG 85

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                    G             T    A  +G+       
Sbjct: 86  LDDSQFDDKG------------NTALYYAVDSGNMQTVKLF 114

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 54.8 bits (133), Expect = 5e-08
 Identities = 7/96 (7%), Positives = 22/96 (22%), Gaps = 14/96 (14%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT-ALHWAAYCGREKTVAVLLSL 754
                  +H+    G+   +   +    S N  +   +   +  A      + +  L   
Sbjct: 158 LAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKY 217

Query: 755 GAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                   +         + +          I+  +
Sbjct: 218 DI------NIY-------SANLENVLLDDAEIAKMI 240

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 54.5 bits (132), Expect = 6e-08
 Identities = 15/70 (21%), Positives = 25/70 (35%), Gaps = 8/70 (11%)

Query: 721 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 780
           +       D+ G +A ++A      + V  LL+ GA   LL +          P   A++
Sbjct: 20  SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLEN--------EFPLHQAAT 71

Query: 781 NGHKGISGFL 790
                I   L
Sbjct: 72  LEDTKIVKIL 81

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 51.8 bits (125), Expect = 5e-07
 Identities = 13/89 (14%), Positives = 23/89 (25%), Gaps = 8/89 (8%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762
            + A  L     +   ++      F      + +H     G    + +LL    +     
Sbjct: 133 FYHAVMLNDVSIVSYFLSEI-PSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNN 191

Query: 763 DPSPEFPLSRTPS-DLASSNGHKGISGFL 790
                  L   P   LA  N    +   L
Sbjct: 192 S------LLFIPDIKLAIDNKDIEMLQAL 214

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 57.0 bits (139), Expect = 2e-09
 Identities = 21/105 (20%), Positives = 30/105 (28%), Gaps = 26/105 (24%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTALHWAAYCGREKTVAVL 751
           +      LH AA           V      G  ++ +D  G   LH A   G  +   +L
Sbjct: 39  EGRQSTPLHFAAGYNR----VSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELL 94

Query: 752 LSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           +  GA                      TP   A++ G   I   L
Sbjct: 95  VKHGAVVNVADLWK------------FTPLHEAAAKGKYEICKLL 127

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 57.0 bits (139), Expect = 2e-09
 Identities = 31/101 (30%), Positives = 39/101 (38%), Gaps = 19/101 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G   LH A S G+    +  V  G  +N  DL  +T LH AA  G+ +   +LL  G
Sbjct: 72  DKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG 131

Query: 756 AAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A P      G             TP DL   +G   I   L
Sbjct: 132 ADPTKKNRDG------------NTPLDLV-KDGDTDIQDLL 159

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 55.5 bits (135), Expect = 5e-09
 Identities = 26/106 (24%), Positives = 32/106 (30%), Gaps = 27/106 (25%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV-----TAGVSINFRDLSGWTALHWAAYCGREKTVAV 750
           + E    L  AA  G       TV        V+    +    T LH+AA   R   V  
Sbjct: 5   NSEADRQLLEAAKAGD----VETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEY 60

Query: 751 LLSLGAAP------GLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           LL  GA        G              P   A S GH  ++  L
Sbjct: 61  LLQHGADVHAKDKGG------------LVPLHNACSYGHYEVAELL 94

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 60.9 bits (148), Expect = 2e-09
 Identities = 32/143 (22%), Positives = 60/143 (41%), Gaps = 16/143 (11%)

Query: 907  HSAAIQIQKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYRPI--IWSVGILEKVIL 964
             +A I+IQK  RGW  RK+++ +R+  + IQ +VRGHQAR     +    +  I++K   
Sbjct: 768  RAACIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQR 827

Query: 965  RWR-RK------------GSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERL 1011
             +  RK             + LRG+           +H  +    +      R      L
Sbjct: 828  MYVVRKRYQCMRDATIALQALLRGYLVRNKYQMMLREHKSIIIQKHVRGWLARVHYHRTL 887

Query: 1012 QKALGRVKSMVQYPEARAQYRRL 1034
            +  +  ++   +   A+ + ++L
Sbjct: 888  KAIV-YLQCCYRRMMAKRELKKL 909

>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080

 Score = 50.5 bits (121), Expect = 3e-06
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 5/97 (5%)

Query: 854 TQAADRIHQIFRMQSFQRKQLTEFNNELGISYEHALSLVAAKSLRPVQGDGLAHSAAIQI 913
           T+AA  I +  RM    RK+       +  +     +L+    +R      L    +I I
Sbjct: 816 TRAAIIIQKFQRMY-VVRKRY----QCMRDATIALQALLRGYLVRNKYQMMLREHKSIII 870

Query: 914 QKKFRGWKKRKEFLLIRQRIVKIQAHVRGHQARKKYR 950
           QK  RGW  R  +    + IV +Q   R   A+++ +
Sbjct: 871 QKHVRGWLARVHYHRTLKAIVYLQCCYRRMMAKRELK 907

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 57.4 bits (139), Expect = 2e-09
 Identities = 8/68 (11%), Positives = 21/68 (30%), Gaps = 7/68 (10%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPT-------VTAGVSINFRDLSGWTALHWAAYCGREKTV 748
               + V+       +    +           +G+ +  +D  G TAL +   C +   +
Sbjct: 111 YKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIAL 170

Query: 749 AVLLSLGA 756
            ++     
Sbjct: 171 KMMEDYIK 178

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 8/110 (7%), Positives = 17/110 (15%), Gaps = 19/110 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTA------GVSINFRDLSGWTALHWAAYCGREKTV- 748
             EG  +       G +     T         G  I          +    +        
Sbjct: 72  TKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENE 131

Query: 749 ------AVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
                  +    G           +     T  +             + +
Sbjct: 132 MIPLYKLIFSQSGL------QLLIKDKWGLTALEFVKRCQKPIALKMMED 175

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 46.2 bits (110), Expect = 1e-05
 Identities = 17/116 (14%), Positives = 24/116 (20%), Gaps = 19/116 (16%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYCGREKTVA-- 749
                 +L+       D A           G  I  R   G T        G        
Sbjct: 35  SVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTT 94

Query: 750 ----VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLS 801
               + L  GA    L          +        N     +  +    L  L+ S
Sbjct: 95  ELCKIFLEKGADITALYK------PYKIVVFKNIFNYFVDENEMIP---LYKLIFS 141

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 10/61 (16%), Positives = 18/61 (29%), Gaps = 3/61 (4%)

Query: 730 LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGF 789
           +S +  +  AA  G  +    L   G       +   +  +        +      IS F
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMF 60

Query: 790 L 790
           L
Sbjct: 61  L 61

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 58.9 bits (142), Expect = 3e-09
 Identities = 25/166 (15%), Positives = 45/166 (27%), Gaps = 21/166 (12%)

Query: 695 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAY---CGREKTVAVL 751
           +D+ G   LH   S+     +K  V  G +  + D  G + L  A          T   L
Sbjct: 127 VDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEAL 186

Query: 752 LSLGAAPGLLTDPSPEFPLSRTP----SDLASSNGHKGISGFLAESSLTSLLLSLKMNDS 807
           L       +L D       +RT        +   G    + +  +  +  +         
Sbjct: 187 LDYLYPCLILEDSM-----NRTILHHIIITSGMTGCSAAAKYYLDILMGWI--------- 232

Query: 808 ADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNA 853
                         +            +   + L LK  +  + NA
Sbjct: 233 VKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNA 278

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 55.0 bits (132), Expect = 5e-08
 Identities = 16/80 (20%), Positives = 27/80 (33%), Gaps = 4/80 (5%)

Query: 681 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTV----TAGVSINFRDLSGWTAL 736
           L+  + +    P       +       +     +I   +         +N +D +G T L
Sbjct: 228 LMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCL 287

Query: 737 HWAAYCGREKTVAVLLSLGA 756
           + AA  G    V  LL  GA
Sbjct: 288 NIAARLGNISIVDALLDYGA 307

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 49.6 bits (118), Expect = 3e-06
 Identities = 17/105 (16%), Positives = 34/105 (32%), Gaps = 5/105 (4%)

Query: 653 ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYD 712
            + E+ +       ++L   ++E   S        + +G        Q   H++      
Sbjct: 55  NDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEG----GSSNQQQQHVSFDSLLQ 110

Query: 713 WAIKPTVTAGVSINF-RDLSGWTALHWAAYCGREKTVAVLLSLGA 756
                     +++N   D  G T LHW       + V  L+  G+
Sbjct: 111 EVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS 155

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 44.6 bits (105), Expect = 1e-04
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 740
           D  G   L++AA LG    +   +  G      + SG   + + A
Sbjct: 280 DSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 324

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 57.6 bits (140), Expect = 3e-09
 Identities = 24/105 (22%), Positives = 36/105 (34%), Gaps = 4/105 (3%)

Query: 690 KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVA 749
             P  L   G+  L  AA +G +  ++  +  G  I  +D  G T LH       +    
Sbjct: 112 YRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFAC 171

Query: 750 ----VLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
               +LLS      L +          TP  LA   G+  +   L
Sbjct: 172 QMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHL 216

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 55.7 bits (135), Expect = 1e-08
 Identities = 28/126 (22%), Positives = 43/126 (34%), Gaps = 24/126 (19%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-------------LSGWTALHWAAYC 742
             EGQ  LH+A        ++  +  G S++ R                G   L +AA  
Sbjct: 72  LYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACV 131

Query: 743 GREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSL 802
           G E+ V +L+  GA      D   +  L  T   +     +K  +  +       LLLS 
Sbjct: 132 GSEEIVRLLIEHGA------DIRAQDSLGNTVLHILILQPNKTFACQMYN-----LLLSY 180

Query: 803 KMNDSA 808
              D  
Sbjct: 181 DGGDHL 186

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 54.9 bits (133), Expect = 2e-08
 Identities = 24/107 (22%), Positives = 31/107 (28%), Gaps = 12/107 (11%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSI-----NFRDLSGWTALHWAAYCGREKTVAV 750
              G+  LH+AA      A    + A   +           G TALH A        V  
Sbjct: 34  GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQNVNLVRA 93

Query: 751 LLSLGA-------APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           LL+ GA              P         P   A+  G + I   L
Sbjct: 94  LLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLL 140

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 53.8 bits (130), Expect = 6e-08
 Identities = 21/98 (21%), Positives = 32/98 (32%), Gaps = 20/98 (20%)

Query: 703 LHLAASLGYDWAIKPTVT-----AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAA 757
           L LAA           ++      G  ++ R   G TALH AA     +   VL+     
Sbjct: 7   LLLAAKEND----VQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAP- 61

Query: 758 PGLLTDPSPEFPLS-----RTPSDLASSNGHKGISGFL 790
                +   E   S     +T   +A  N +  +   L
Sbjct: 62  -----ELVFEPMTSELYEGQTALHIAVINQNVNLVRAL 94

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 47.6 bits (114), Expect = 6e-06
 Identities = 10/71 (14%), Positives = 15/71 (21%), Gaps = 10/71 (14%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTV----TAGVSIN------FRDLSGWTALHWAAYCGRE 745
           D  G  VLH+                  +     +        +  G T    A   G  
Sbjct: 151 DSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFKLAGVEGNI 210

Query: 746 KTVAVLLSLGA 756
                L+    
Sbjct: 211 VMFQHLMQKRK 221

>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837

 Score = 60.0 bits (146), Expect = 3e-09
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 907 HSAAIQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYR 950
                  Q   RG+  RK +  ++ +   +  IQ ++R     + ++
Sbjct: 779 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 825

>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995

 Score = 58.9 bits (143), Expect = 9e-09
 Identities = 20/147 (13%), Positives = 48/147 (32%), Gaps = 10/147 (6%)

Query: 911  IQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYRPIIWSVGILEKVILRWR 967
             +  +  +    ++  L  R     I  +Q+ +  H+  KK         +  ++   + 
Sbjct: 765  KRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVS-ELEAIYN 823

Query: 968  RKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTE------ERLQKALGRVKSM 1021
               + LR  +R+            +        K  ++  E      +R +K    ++  
Sbjct: 824  SLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKY 883

Query: 1022 VQYPEARAQYRRLLTVVEGSRETKESN 1048
             +  +    +    +V  GS ET +S 
Sbjct: 884  NRILKKLENWATTKSVYLGSNETGDSI 910

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 55.8 bits (134), Expect = 2e-08
 Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 18/117 (15%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPT---VTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL 752
            +  +  LHLA       ++      V    +++ +   G TALH+       + + +LL
Sbjct: 166 HEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLL 225

Query: 753 SLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSAD 809
              A+  +            TP D+A    H+             LL          
Sbjct: 226 RGKASIEIAN------ESGETPLDIAKRLKHEHC---------EELLTQALSGRFNS 267

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 55.8 bits (134), Expect = 3e-08
 Identities = 24/114 (21%), Positives = 40/114 (35%), Gaps = 18/114 (15%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPT---VTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL 752
               + VLHLA  +    ++      +  G  ++ +   G TALH+AA   +   + +LL
Sbjct: 187 QAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLL 246

Query: 753 SLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMND 806
              A  G + +         T  D+A    HK             LL   +   
Sbjct: 247 KGRALVGTVNE------AGETALDIARKKHHKEC---------EELLEQAQAGT 285

>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184

 Score = 57.2 bits (138), Expect = 3e-08
 Identities = 25/132 (18%), Positives = 45/132 (34%), Gaps = 29/132 (21%)

Query: 907  HSAAIQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYRPIIWSVGILEKVI 963
                I  Q + RG+  RK F   +Q+   I  IQ +VR       +      +      +
Sbjct: 792  TDVIIAFQAQCRGYLARKAFAKRQQQLESIFCIQYNVRSFMNVXHWP--WMXLFFXIXPL 849

Query: 964  LRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGRVKSMVQ 1023
            L+  R+   ++    +                         ++T+ER QKA   +K + Q
Sbjct: 850  LKVTRQEEEMQAKDEE------------------------LQRTKERQQKAEAELKELEQ 885

Query: 1024 YPEARAQYRRLL 1035
                  + + LL
Sbjct: 886  KHTQLCEEKNLL 897

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 52.5 bits (126), Expect = 3e-07
 Identities = 25/117 (21%), Positives = 32/117 (27%), Gaps = 22/117 (18%)

Query: 696 DDEGQGVLHLA---ASLGYDWAIKPTVTAG-----------VSINFRDLSGWTALHWAAY 741
            + G+  L  A      G +  I   +               S       G TALH A  
Sbjct: 51  PETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIE 110

Query: 742 CGREKTVAVLLSLGA--------APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
                 V +L+  GA             T   P F     P  LA+      I  FL
Sbjct: 111 RRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 52.1 bits (125), Expect = 3e-07
 Identities = 15/105 (14%), Positives = 23/105 (21%), Gaps = 29/105 (27%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTA----------------GVSINFRDLSGWTALHWA 739
           D  G  VLH    +  +                                +  G T L  A
Sbjct: 181 DSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALA 240

Query: 740 AYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHK 784
           A  G+   +A +L                         A+ + H 
Sbjct: 241 ASSGKIGVLAYILQREIH-------------EPECRHAAAHHHHH 272

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 50.9 bits (122), Expect = 7e-07
 Identities = 20/120 (16%), Positives = 31/120 (25%), Gaps = 17/120 (14%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD--------------LSGWTALHWAAY 741
             +GQ  LH+A        +   V  G  +                    G   L  AA 
Sbjct: 98  YYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAAC 157

Query: 742 CGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLS 801
             +   V  LL     P    D S    +  T            +      +S+ + +L 
Sbjct: 158 TNQLAIVKFLLQNSWQP---ADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILI 214

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 46.3 bits (110), Expect = 2e-05
 Identities = 22/115 (19%), Positives = 34/115 (29%), Gaps = 13/115 (11%)

Query: 689 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVS---INFRDLSGWTALHWAAYCGRE 745
                     G+  L LAA       +K  +        I+ RD  G T LH        
Sbjct: 138 KTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADN 197

Query: 746 KTVAVLLSLGAAPGLLT-----DPSPEFPLS-----RTPSDLASSNGHKGISGFL 790
                         +L       P+ +          TP  LA+S+G  G+  ++
Sbjct: 198 TVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYI 252

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 51.7 bits (124), Expect = 3e-07
 Identities = 9/63 (14%), Positives = 16/63 (25%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +      L +    G                  +  G T L  AA  G+ +    +L   
Sbjct: 185 NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQRE 244

Query: 756 AAP 758
            + 
Sbjct: 245 FSG 247

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 51.7 bits (124), Expect = 4e-07
 Identities = 23/135 (17%), Positives = 34/135 (25%), Gaps = 25/135 (18%)

Query: 681 LLRKVCEDGKGPCIL----DDEGQGVLHLAASLGYD--------------WAIKPTVTAG 722
           LL  +  + K            G+  L  A     D               +  P     
Sbjct: 21  LLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVN 80

Query: 723 VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA-----APGLLTDPSPEFPLS--RTPS 775
                    G +ALH A      + V +L+  GA     A G                P 
Sbjct: 81  AQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPL 140

Query: 776 DLASSNGHKGISGFL 790
            LA+      +  +L
Sbjct: 141 SLAACTKQWDVVTYL 155

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 49.8 bits (119), Expect = 2e-06
 Identities = 16/76 (21%), Positives = 22/76 (28%), Gaps = 13/76 (17%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLS-------------GWTALHWAAYC 742
             +G   LH+A        +K  V  G  ++ R                G   L  AA  
Sbjct: 87  FYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT 146

Query: 743 GREKTVAVLLSLGAAP 758
            +   V  LL     P
Sbjct: 147 KQWDVVTYLLENPHQP 162

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 48.2 bits (115), Expect = 5e-06
 Identities = 19/113 (16%), Positives = 29/113 (25%), Gaps = 32/113 (28%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D  G  VLH                    +   +    +AL    Y G  +  A L    
Sbjct: 169 DSLGNTVLHALV-----------------MIADNSPENSALVIHMYDGLLQMGARLCPTV 211

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSA 808
               +            TP  LA+  G   I            +L  + + +A
Sbjct: 212 QLEEISNH------QGLTPLKLAAKEGKIEI---------FRHILQREFSGAA 249

>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010

 Score = 52.7 bits (127), Expect = 6e-07
 Identities = 23/152 (15%), Positives = 50/152 (32%), Gaps = 14/152 (9%)

Query: 907  HSAAIQIQKKFRGWKKRKEFLLIRQR---------IVKIQAHVRGHQARKKYRPIIWSVG 957
             S   +     R  +  +     +           I  +Q+ +  H+  KK         
Sbjct: 763  GSEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQE 822

Query: 958  ILEKVILRWRRKGSGLRGFRRDALGMNPNPQHMPLKEDDYDFLKDGRKQTEERLQKALGR 1017
            +  ++   +    + LR  +R+   + P        +  +  L+   ++  E L+  L R
Sbjct: 823  VS-ELEAIYNSLQTKLRLIKREPF-VAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKR 880

Query: 1018 VKSMVQYPEARAQYRRLLTVVEGSRETKESNM 1049
             K +        +Y R+L  +E    TK   +
Sbjct: 881  QKKIA---VLLQKYNRILKKLENWATTKSVYL 909

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 50.5 bits (121), Expect = 9e-07
 Identities = 23/117 (19%), Positives = 31/117 (26%), Gaps = 22/117 (18%)

Query: 696 DDEGQGVLHLAA---SLGYDWAIKPTVTAG-----------VSINFRDLSGWTALHWAAY 741
              G+  L  A    S G +  I   +                       G TALH A  
Sbjct: 43  PSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIE 102

Query: 742 CGREKTVAVLLSLGA--------APGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
              +  V +L+  GA              D    F     P  LA+      I  +L
Sbjct: 103 RRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYL 159

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 46.7 bits (111), Expect = 2e-05
 Identities = 14/77 (18%), Positives = 21/77 (27%), Gaps = 14/77 (18%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD--------------LSGWTALHWAAY 741
              GQ  LH+A        ++  V  G  ++ +                 G   L  AA 
Sbjct: 90  YYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAAC 149

Query: 742 CGREKTVAVLLSLGAAP 758
             +   V  L   G   
Sbjct: 150 TNQPHIVHYLTENGHKQ 166

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 45.9 bits (109), Expect = 3e-05
 Identities = 11/78 (14%), Positives = 21/78 (26%), Gaps = 16/78 (20%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPT---------VTAGVSIN-------FRDLSGWTALHWA 739
           D  G  VLH   ++  +               +     +          +  G + L  A
Sbjct: 173 DSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMA 232

Query: 740 AYCGREKTVAVLLSLGAA 757
           A  G+      ++    A
Sbjct: 233 AKTGKIGIFQHIIRREIA 250

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 45.2 bits (107), Expect = 6e-05
 Identities = 25/131 (19%), Positives = 39/131 (29%), Gaps = 34/131 (25%)

Query: 695 LDDEGQGVLHLAASLGYDWAIKPTV-------TAGVSINFRDLSGWTALHWAAYCGRE-- 745
               G+  L LAA           V            +  +D  G T LH          
Sbjct: 136 YFYFGELPLSLAACTNQ----PHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTR 191

Query: 746 -------KTVAVLLSLGAAPGLLTDPSPEFPLS---RTPSDLASSNGHKGISGFLAESSL 795
                  K   +LL   A   L  D + E  L+    +P  +A+  G  GI     +   
Sbjct: 192 ENTKFVTKMYDLLLIKCAK--LFPDTNLEALLNNDGLSPLMMAAKTGKIGI----FQ--- 242

Query: 796 TSLLLSLKMND 806
              ++  ++ D
Sbjct: 243 --HIIRREIAD 251

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 48.0 bits (114), Expect = 1e-05
 Identities = 31/231 (13%), Positives = 62/231 (26%), Gaps = 44/231 (19%)

Query: 589 KDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESY 648
            D  +  I        F H      LS+ +                +     +++  +  
Sbjct: 14  NDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIH------IFLPGTKNMEQVRQLL 67

Query: 649 QMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEG-QGVLHLAA 707
            +  A+  +N                ++L+S   +K  +      +    G    L    
Sbjct: 68  CLYYAHYNRN---------------AKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLC 112

Query: 708 SLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPE 767
            L         +T+   +       + A   AA  G    +  L  L     ++     E
Sbjct: 113 LL---------LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTE-IMAMIQAE 162

Query: 768 FPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA 818
              +     LA+ NGH  +          + L  L   ++      E+  A
Sbjct: 163 ---NYHAFRLAAENGHLHV---------LNRLCELAPTEATAMIQAENYYA 201

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 47.6 bits (113), Expect = 1e-05
 Identities = 18/147 (12%), Positives = 38/147 (25%), Gaps = 21/147 (14%)

Query: 657 KNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDE---GQGVLHLAASLGYDW 713
           +   ++V  +        +++     +    DG    +   E   G  +L        + 
Sbjct: 234 EYGEKYVNPFIARHVNRLKEM-HDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEV 292

Query: 714 AIK--------PTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPS 765
            +         P + A              L  A   G +   A+LLS+ +   L     
Sbjct: 293 LLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVLALTKA-- 350

Query: 766 PEFPLSRTPSDLASSNGHKGISGFLAE 792
                      +  + G   +     E
Sbjct: 351 -------NNYYINETGGRLDLRAVALE 370

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 47.1 bits (111), Expect = 2e-05
 Identities = 25/128 (19%), Positives = 37/128 (28%), Gaps = 14/128 (10%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             +    L  A +     A +  +  G ++N  D +G   LH A   G      + L  G
Sbjct: 232 GQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRG 291

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALED 815
           A  G            R P  +A    +  I         T L L+      A  G   D
Sbjct: 292 ADLGARD------SEGRDPLTIAMETANADIV--------TLLRLAKMREAEAAQGQAGD 337

Query: 816 SIAKAVQT 823
                +  
Sbjct: 338 ETYLDIFR 345

>3muj_A Transcription factor COE3; immunoglobulin like fold, helix-loop-helix, structural genom consortium, SGC, DNA binding protein; 1.92A {Homo sapiens} PDB: 3mqi_A Length = 138

 Score = 43.1 bits (101), Expect = 6e-05
 Identities = 15/81 (18%), Positives = 29/81 (35%), Gaps = 8/81 (9%)

Query: 497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIP 556
            I   SP   +T     V++ G                +F  + V +E++    +  + P
Sbjct: 7   CIKAISPSEGWTTGGATVIIIGDNFFDG-------LQVVFGTMLVWSELITPHAIRVQTP 59

Query: 557 P-HAVGRVPFYITCSNRLACS 576
           P H  G V   ++  ++  C 
Sbjct: 60  PRHIPGVVEVTLSYKSKQFCK 80

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	1082
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-11
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-09
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-08
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	8e-08
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	5e-06
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-05
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-04
d2cxka1	82	b.1.18.1 (A:872-953) Calmodulin binding transcript	2e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-10
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-06
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-04
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	0.003
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-08
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-07
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-04
d2mysa2	794	c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain	1e-08
d1kk8a2	789	c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain	2e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-08
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	4e-05
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	7e-05
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-04
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-07
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	0.003
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-07
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	6e-06
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-05
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-07
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	6e-07
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	6e-06
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-04
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-05
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	0.004
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-05
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	0.003
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	3e-05
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-05
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.001
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.002
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.002
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-04
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	4e-04
d1qhoa1	81	b.1.18.2 (A:496-576) Five domain "maltogenic" alph	0.001
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	0.001

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 65.0 bits (157), Expect = 2e-11
 Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 6/90 (6%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT 762
           LH+A+ +G+   +K  +  G S N  ++   T LH AA  G  +    LL   A      
Sbjct: 4   LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKA------ 57

Query: 763 DPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
             + +    +TP   A+  GH  +   L E
Sbjct: 58  KVNAKAKDDQTPLHCAARIGHTNMVKLLLE 87

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.3 bits (137), Expect = 6e-09
 Identities = 25/104 (24%), Positives = 42/104 (40%), Gaps = 6/104 (5%)

Query: 687 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 746
           + G         G   LH+A+  G    +K  +     +N +   G++ LH AA  G   
Sbjct: 285 KHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTD 344

Query: 747 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
            V +LL  GA+P  ++          TP  +A   G+  ++  L
Sbjct: 345 IVTLLLKNGASPNEVSS------DGTTPLAIAKRLGYISVTDVL 382

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 8e-08
 Identities = 17/77 (22%), Positives = 25/77 (32%)

Query: 678 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALH 737
              L++ + +           G   LH AA  G+   +   +  G S N     G T L 
Sbjct: 309 NIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLA 368

Query: 738 WAAYCGREKTVAVLLSL 754
            A   G      VL  +
Sbjct: 369 IAKRLGYISVTDVLKVV 385

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.4 bits (127), Expect = 8e-08
 Identities = 20/78 (25%), Positives = 35/78 (44%)

Query: 681 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 740
           +++ + + G  P + + + +  LH+AA  G+    K  +     +N +     T LH AA
Sbjct: 15  IVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQTPLHCAA 74

Query: 741 YCGREKTVAVLLSLGAAP 758
             G    V +LL   A P
Sbjct: 75  RIGHTNMVKLLLENNANP 92

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.7 bits (112), Expect = 5e-06
 Identities = 20/101 (19%), Positives = 34/101 (33%)

Query: 658 NLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKP 717
           N +           I   + +   +  + E       +  +G   LH+AA  G     + 
Sbjct: 91  NPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAEL 150

Query: 718 TVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 758
            +      N    +G T LH A +      V +LL  G +P
Sbjct: 151 LLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSP 191

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (105), Expect = 4e-05
 Identities = 23/104 (22%), Positives = 36/104 (34%), Gaps = 4/104 (3%)

Query: 653 ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYD 712
            +P            I  K  + ++   LL+              +G   LHLAA  G+ 
Sbjct: 189 GSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS----ANAESVQGVTPLHLAAQEGHA 244

Query: 713 WAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
             +   ++   + N  + SG T LH  A  G      VL+  G 
Sbjct: 245 EMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV 288

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (104), Expect = 6e-05
 Identities = 24/100 (24%), Positives = 36/100 (36%), Gaps = 6/100 (6%)

Query: 687 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 746
           E    P      G   LH+A        +K  +  G S +    +G+T LH AA   + +
Sbjct: 153 ERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVE 212

Query: 747 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGI 786
               LL  G +    +          TP  LA+  GH  +
Sbjct: 213 VARSLLQYGGSANAESVQGV------TPLHLAAQEGHAEM 246

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 2e-04
 Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 6/59 (10%)

Query: 734 TALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
           T LH A++ G    V  LL  GA       P+       TP  +A+  GH  ++ +L +
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGA------SPNVSNVKVETPLHMAARAGHTEVAKYLLQ 54

>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 82

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: Calmodulin binding transcription activator 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.1 bits (134), Expect = 2e-10
 Identities = 26/86 (30%), Positives = 50/86 (58%), Gaps = 6/86 (6%)

Query: 498 IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPP 557
           + D+SP+W+Y +  ++V++TG + ++        +SC+F ++ VPA ++  GVL C  P 
Sbjct: 2   VTDYSPEWSYPEGGVKVLITGPWQEAS-----NNYSCLFDQISVPASLIQPGVLRCYCPA 56

Query: 558 HAVGRVPFYITCSNRLACSEVREFDY 583
           H  G V   +  +N++  + V  F+Y
Sbjct: 57  HDTGLVTLQVAFNNQIISNSV-VFEY 81

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.6 bits (143), Expect = 5e-10
 Identities = 22/109 (20%), Positives = 36/109 (33%), Gaps = 5/109 (4%)

Query: 651 VEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLG 710
           V A      +  +           E +   LL      G    +  + G+  L LA    
Sbjct: 175 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDH----GADVNVRGERGKTPLILAVEKK 230

Query: 711 YDWAIKPTVT-AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 758
           +   ++  +    + IN  D  G TAL  A     +K   +L   GA+ 
Sbjct: 231 HLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (113), Expect = 3e-06
 Identities = 18/72 (25%), Positives = 22/72 (30%), Gaps = 5/72 (6%)

Query: 721 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 780
            G  +N R   G T L  A        V  LL         TD        +T   LA  
Sbjct: 208 HGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSD-----GKTALLLAVE 262

Query: 781 NGHKGISGFLAE 792
              K I+  L +
Sbjct: 263 LKLKKIAELLCK 274

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (98), Expect = 2e-04
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 698 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLL 752
           E   +L  A        ++  +  G ++NF++   GWT LH A    RE  V +LL
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLL 59

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 0.003
 Identities = 23/90 (25%), Positives = 30/90 (33%), Gaps = 10/90 (11%)

Query: 678 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD-------- 729
              LL+     G      D  G      AA  G   A+K     G ++N R         
Sbjct: 84  SVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQER 143

Query: 730 --LSGWTALHWAAYCGREKTVAVLLSLGAA 757
               G TAL  AA  G  + + +LL    A
Sbjct: 144 LRKGGATALMDAAEKGHVEVLKILLDEMGA 173

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 55.5 bits (132), Expect = 1e-08
 Identities = 17/84 (20%), Positives = 28/84 (33%)

Query: 669 LQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFR 728
           L    +      +   V E G      D++G+  + LAA  G    +   +  G S+   
Sbjct: 191 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAV 250

Query: 729 DLSGWTALHWAAYCGREKTVAVLL 752
           D +  TA   A        V +  
Sbjct: 251 DATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 51.3 bits (121), Expect = 2e-07
 Identities = 18/80 (22%), Positives = 25/80 (31%), Gaps = 6/80 (7%)

Query: 711 YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL 770
                      G + + +D  G T +  AA  GR + V  L+  GA              
Sbjct: 200 MPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA------SVEAVDAT 253

Query: 771 SRTPSDLASSNGHKGISGFL 790
             T   LA +N H  I    
Sbjct: 254 DHTARQLAQANNHHNIVDIF 273

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 42.4 bits (98), Expect = 2e-04
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 2/58 (3%)

Query: 703 LHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGL 760
           LH  A+ G     +P     V+I        T LHW A     +    L+   A   +
Sbjct: 6   LHTEAA-GSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKECI 61

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

 Score = 57.0 bits (137), Expect = 1e-08
 Identities = 12/47 (25%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 907 HSAAIQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYR 950
                  Q + RG+  R E+  + +R   I  IQ +VR     K + 
Sbjct: 735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWP 781

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 56.3 bits (135), Expect = 2e-08
 Identities = 8/47 (17%), Positives = 19/47 (40%), Gaps = 3/47 (6%)

Query: 907 HSAAIQIQKKFRGWKKRKEFLLIRQR---IVKIQAHVRGHQARKKYR 950
                  Q   RG+  RK +  ++ +   +  IQ ++R     + ++
Sbjct: 731 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ 777

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 54.5 bits (130), Expect = 3e-08
 Identities = 20/155 (12%), Positives = 50/155 (32%), Gaps = 10/155 (6%)

Query: 607 HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKY 666
           +L +  I +  + PQ  L         L   + Q         ++  + ++ +   +   
Sbjct: 1   NLTIHNIENYENDPQLRL-----IPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGT 55

Query: 667 QILQKIMKE--KLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIK---PTVTA 721
           + ++++ +     Y+   R   +          + + +  +AA  G   A+      +T+
Sbjct: 56  KNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTS 115

Query: 722 GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA 756
              +       + A   AA  G    +  L  L  
Sbjct: 116 DEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAP 150

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 44.5 bits (104), Expect = 4e-05
 Identities = 11/65 (16%), Positives = 17/65 (26%), Gaps = 2/65 (3%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLS--GWTALHWAAYCGREKTVAVLLS 753
             E      LAA  G+   +        +     +    + A   AA  G    +  L  
Sbjct: 123 QAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCE 182

Query: 754 LGAAP 758
           L    
Sbjct: 183 LAPTE 187

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 44.1 bits (103), Expect = 7e-05
 Identities = 13/71 (18%), Positives = 19/71 (26%), Gaps = 5/71 (7%)

Query: 690 KGPCILDDEGQGVLHLAASLGYDWAIK-----PTVTAGVSINFRDLSGWTALHWAAYCGR 744
           K  C+        L           I+     P + A              L  A   G 
Sbjct: 270 KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGN 329

Query: 745 EKTVAVLLSLG 755
           +   A+LLS+ 
Sbjct: 330 QGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 42.2 bits (98), Expect = 3e-04
 Identities = 17/107 (15%), Positives = 27/107 (25%), Gaps = 16/107 (14%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
             E      L+   G             S   +       L           +  LLS+ 
Sbjct: 249 LKEMHDAFKLSNPDGV------FDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIP 302

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSL 802
               L    +     +     LA   G++G           +LLLS+
Sbjct: 303 GIKALAPTATIP-GDANELLRLALRLGNQGA---------CALLLSI 339

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 52.4 bits (124), Expect = 1e-07
 Identities = 26/138 (18%), Positives = 54/138 (39%), Gaps = 6/138 (4%)

Query: 647 SYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLA 706
             + +E   +  +++     +  +K  +  +     + +             G   LH+A
Sbjct: 147 EEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVA 206

Query: 707 ASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSP 766
           A+ GY   +K  + A   +N +D  GWT LH AA+ G+E+   +L+        +     
Sbjct: 207 AAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNK--- 263

Query: 767 EFPLSRTPSDLASSNGHK 784
              + +T  D+A  +   
Sbjct: 264 ---VGQTAFDVADEDILG 278

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 38.5 bits (88), Expect = 0.003
 Identities = 13/53 (24%), Positives = 20/53 (37%)

Query: 695 LDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT 747
           +  +   V   A S G    +   +  G  IN+ ++ G TALH A        
Sbjct: 36  VKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDM 88

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 51.2 bits (121), Expect = 2e-07
 Identities = 21/112 (18%), Positives = 34/112 (30%), Gaps = 9/112 (8%)

Query: 670 QKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT---AGVSIN 726
               K  L   +   V +  +      +E +   +       D  ++           +N
Sbjct: 194 SAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLN 253

Query: 727 FRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA 778
            +D +G T L+ AA  G    V  LL  GA P +             P D  
Sbjct: 254 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANK------SGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 47.0 bits (110), Expect = 6e-06
 Identities = 39/250 (15%), Positives = 77/250 (30%), Gaps = 23/250 (9%)

Query: 612 RILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQK 671
           +I+    SP  + +E   + +  + +++  + +E    +   +  +N S+     Q  Q 
Sbjct: 20  KIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRN-SEGGSSNQQQQH 78

Query: 672 IMKEKLYSWLLRKVCEDGKGPCI-----LDDEGQGVLHLAASLGYDWAIKPTVTAGVSIN 726
           +  + L    L++V +      +     +D+ G   LH   S+     +K  V  G +  
Sbjct: 79  VSFDSL----LQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRL 134

Query: 727 FRDLSGWTALHWA---AYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH 783
           + D  G + L  A          T   LL       +L D        RT          
Sbjct: 135 YGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN-----RTILHHIIITSG 189

Query: 784 KGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTATPANDNDESDVLSL 843
                  A+  L  L+  +                   +            +   + L L
Sbjct: 190 MTGCSAAAKYYLDILMGWI-----VKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDL 244

Query: 844 KDSLTAICNA 853
           K  +  + NA
Sbjct: 245 KWIIANMLNA 254

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 45.4 bits (106), Expect = 2e-05
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 740
           D  G   L++AA LG    +   +  G      + SG   + + A
Sbjct: 256 DSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.9 bits (120), Expect = 3e-07
 Identities = 31/182 (17%), Positives = 50/182 (27%), Gaps = 16/182 (8%)

Query: 695 LDDEGQGVLHLAASLGYDWAIKPTVTAGVS---INFRDLSGWTALHWAAYCGREKTVAVL 751
           + ++G   LHLA    ++  +   +        ++ ++  G TALH AA  G   TV  L
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKL 64

Query: 752 LSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDG 811
            + G                 T   LA        +  L       L         A D 
Sbjct: 65  YAAG------AGVLVAERGGHTALHLACRVRAHTCACVL-------LQPRPSHPRDASDT 111

Query: 812 ALEDSIAKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNATQAADRIHQIFRMQSFQR 871
            L  S      T     A  +  N E++     +       A            +     
Sbjct: 112 YLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDA 171

Query: 872 KQ 873
           + 
Sbjct: 172 EM 173

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.7 bits (117), Expect = 6e-07
 Identities = 10/51 (19%), Positives = 15/51 (29%)

Query: 707 ASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAA 757
                   ++  + AG     R   G T L  A          +L + GA 
Sbjct: 200 VEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.4 bits (111), Expect = 4e-06
 Identities = 15/59 (25%), Positives = 20/59 (33%), Gaps = 3/59 (5%)

Query: 725 INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGH 783
             +    G TALH A     E  +  LL   A    L   +      +T   LA+  G 
Sbjct: 2   FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDL---GQTALHLAAILGE 57

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (109), Expect = 5e-06
 Identities = 12/74 (16%), Positives = 25/74 (33%)

Query: 675 EKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWT 734
           E     +++ + + G         G   LH A+  G    ++  V +G   + ++    T
Sbjct: 153 ENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDT 212

Query: 735 ALHWAAYCGREKTV 748
            L  A        +
Sbjct: 213 PLMVARSRRVIDIL 226

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.4 bits (108), Expect = 6e-06
 Identities = 24/126 (19%), Positives = 45/126 (35%), Gaps = 6/126 (4%)

Query: 661 QHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT 720
           ++ +    L   +  +    +   +        +    G+  L  A        ++  + 
Sbjct: 106 RNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQ 165

Query: 721 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS 780
            G ++N +  SG +ALH A+  G    V  L+  GA      D S +   + TP  +A S
Sbjct: 166 HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGA------DSSLKNCHNDTPLMVARS 219

Query: 781 NGHKGI 786
                I
Sbjct: 220 RRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (94), Expect = 3e-04
 Identities = 11/50 (22%), Positives = 18/50 (36%), Gaps = 4/50 (8%)

Query: 697 DEGQGVLHLAASLGYDWA----IKPTVTAGVSINFRDLSGWTALHWAAYC 742
           ++G   LH+A   G   A    +      G  ++  +    T LH A   
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVIT 50

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 44.8 bits (104), Expect = 2e-05
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           D+ G+  LH AA++    A+   +    + + +D    T L  AA  G  +    LL   
Sbjct: 120 DNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNF 179

Query: 756 AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL 790
           A   +         + R P D+AS   H  I   L
Sbjct: 180 ANREITDH------MDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 37.5 bits (85), Expect = 0.004
 Identities = 11/34 (32%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 719 VTAGVSINFR-DLSGWTALHWAAYCGREKTVAVL 751
           +  G  +N   D +G T+LH AA   R      L
Sbjct: 9   LAQGAELNATMDKTGETSLHLAARFARADAAKRL 42

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (104), Expect = 2e-05
 Identities = 12/79 (15%), Positives = 20/79 (25%)

Query: 678 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALH 737
              +   V             G+  LHLA  L     +   +  G  +N     G++   
Sbjct: 124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 183

Query: 738 WAAYCGREKTVAVLLSLGA 756
                   +    L  L  
Sbjct: 184 LTWGRPSTRIQQQLGQLTL 202

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.0 bits (86), Expect = 0.003
 Identities = 11/49 (22%), Positives = 16/49 (32%), Gaps = 4/49 (8%)

Query: 698 EGQGVLHLAASLGYDWAIKPTVT----AGVSINFRDLSGWTALHWAAYC 742
           +G   LHLA            +         +NF++    T LH A   
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVIT 49

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (100), Expect = 3e-05
 Identities = 19/93 (20%), Positives = 30/93 (32%), Gaps = 1/93 (1%)

Query: 661 QHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT 720
                            +   L+ + E G    + D  G   +HLA   G+   +     
Sbjct: 63  VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA- 121

Query: 721 AGVSINFRDLSGWTALHWAAYCGREKTVAVLLS 753
           A   ++ RD  G T L  A   G +  V +L  
Sbjct: 122 AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.9 bits (99), Expect = 3e-05
 Identities = 11/74 (14%), Positives = 26/74 (35%)

Query: 678 YSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALH 737
           ++ ++  + + G      D      LH A    +   ++  +  G  ++ +     TA  
Sbjct: 79  HANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFD 138

Query: 738 WAAYCGREKTVAVL 751
            +   G E    +L
Sbjct: 139 ISIDNGNEDLAEIL 152

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.9 bits (97), Expect = 2e-04
 Identities = 29/106 (27%), Positives = 39/106 (36%), Gaps = 7/106 (6%)

Query: 687 EDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREK 746
           E G  P   D      +H AA+ G    I   +    S N +D  G T LH A    R +
Sbjct: 124 EGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVE 183

Query: 747 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE 792
              +L+S GA          E    +TP  +A   G   I   + E
Sbjct: 184 EAKLLVSQGA------SIYIENKEEKTPLQVA-KGGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 0.001
 Identities = 18/81 (22%), Positives = 26/81 (32%), Gaps = 1/81 (1%)

Query: 672 IMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLS 731
               K    ++  +        I D EG   LHLA         K  V+ G SI   +  
Sbjct: 142 RAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKE 201

Query: 732 GWTALHWAAYCGREKTVAVLL 752
             T L  A   G    +  ++
Sbjct: 202 EKTPLQVAKG-GLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (90), Expect = 0.002
 Identities = 20/96 (20%), Positives = 32/96 (33%), Gaps = 33/96 (34%)

Query: 696 DDEGQGVLHLAASLGYDWAIKPT---------------------------------VTAG 722
           D + +  LH A S G+   ++                                   +  G
Sbjct: 34  DQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKG 93

Query: 723 VSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAP 758
             +N  + +G T LH+AA   R +   +LL  GA P
Sbjct: 94  AQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANP 129

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (88), Expect = 0.002
 Identities = 17/63 (26%), Positives = 26/63 (41%)

Query: 689 GKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTV 748
           G     ++  G   LH AAS          +  G + + +D    TA+H AA  G  K +
Sbjct: 93  GAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMI 152

Query: 749 AVL 751
            +L
Sbjct: 153 HIL 155

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.0 bits (94), Expect = 3e-04
 Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 1/54 (1%)

Query: 703 LHLAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           LH A      + ++  + +    +  +D  G   LHW+      +  + LLS  
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKM 57

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (92), Expect = 4e-04
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query: 725 INFRDLSGWTALHWAAYCGREKTVAVLLSLG 755
           +  R+  G TA   A   GR + V+++ + G
Sbjct: 126 VGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1qhoa1 b.1.18.2 (A:496-576) Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D {Bacillus stearothermophilus [TaxId: 1422]} Length = 81

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 36.5 bits (84), Expect = 0.001
 Identities = 12/75 (16%), Positives = 19/75 (25%), Gaps = 8/75 (10%)

Query: 497 SIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIP 556
            I   +P      P   V + G    + Q          F  V    +      +   +P
Sbjct: 5   QIGSVAP--NMGIPGNVVTIDGKGFGTTQGT------VTFGGVTATVKSWTSNRIEVYVP 56

Query: 557 PHAVGRVPFYITCSN 571
             A G     +T   
Sbjct: 57  NMAAGLTDVKVTAGG 71

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.0 bits (87), Expect = 0.001
 Identities = 13/76 (17%), Positives = 24/76 (31%)

Query: 681 LLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAA 740
           ++  + ++         +G   LH          +K  +    SI   + SG T L  A 
Sbjct: 63  IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122

Query: 741 YCGREKTVAVLLSLGA 756
               E    +L    +
Sbjct: 123 RLKHEHCEELLTQALS 138

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	1082
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.96
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.96
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.96
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	99.96
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.95
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.95
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	99.95
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.95
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	99.94
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.93
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.93
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.93
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.91
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.9
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.9
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.87
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.87
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.84
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.84
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.83
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.83
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.82
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.82
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.82
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.81
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.81
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.8
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.8
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.79
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.79
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.78
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.77
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.76
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.66
d2cxka1	82	Calmodulin binding transcription activator 1 {Huma	98.55
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	98.51
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	98.51
d2mysa2	794	Myosin S1, motor domain {Chicken (Gallus gallus),	98.04
d1kk8a2	789	Myosin S1, motor domain {Bay scallop (Aequipecten	98.04
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	95.91
d1w7ja2	730	Myosin S1, motor domain {Chicken (Gallus gallus),	94.25
d1p7hl1	103	T-cell transcription factor NFAT1 (NFATC2) {Human	92.67
d1qhoa1	81	Five domain "maltogenic" alpha-amylase (glucan 1,4	91.37
d1uadc_	92	Exocyst complex component Sec5, Ral-binding domain	88.62
d1cxla1	87	Cyclomaltodextrin glycanotransferase, domain D {Ba	88.5

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.3e-32  Score=233.17  Aligned_cols=295  Identities=16%  Similarity=0.160  Sum_probs=145.8

Q ss_pred             CCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH--
Q ss_conf             442534049917899999879986568999999716999995699645435542002889997555788998036679--
Q 001410          529 KCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL--  606 (1082)
Q Consensus       529 ~~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l--  606 (1082)
                      +++.||.+|+.+++..|++.|+.  .+..+..|.||||+||..|+  .++++  +++.+|++++..+..|  .+++++  
T Consensus         3 pL~~Aa~~g~~~~v~~Ll~~g~~--in~~d~~g~TpL~~A~~~g~--~~iv~--~Ll~~gadi~~~~~~g--~t~L~~A~   74 (408)
T d1n11a_           3 PLHVASFMGHLPIVKNLLQRGAS--PNVSNVKVETPLHMAARAGH--TEVAK--YLLQNKAKVNAKAKDD--QTPLHCAA   74 (408)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCC--SCCSSSCCCCHHHHHHHHTC--HHHHH--HHHHHTCCSSCCCTTS--CCHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCHHHHHH
T ss_conf             69999988489999999978789--99889999889999998688--99999--9998859988779998--99999999


Q ss_pred             ---HH------------------------------------------------------------------HHHHHHHHC
Q ss_conf             ---89------------------------------------------------------------------999999809
Q 001410          607 ---HL------------------------------------------------------------------RLERILSMR  617 (1082)
Q Consensus       607 ---~~------------------------------------------------------------------rivkLLl~~  617 (1082)
                         +.                                                                  ++++.|+..
T Consensus        75 ~~g~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~  154 (408)
T d1n11a_          75 RIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLER  154 (408)
T ss_dssp             HHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             HCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHC
T ss_conf             86997799999874100123211122024555430332222222211001001456464289999875989999999976


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99987776360209999999616306789988761299876675741259999999982699999999978999985579
Q 001410          618 SSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDD  697 (1082)
Q Consensus       618 g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~  697 (1082)
                      +...+..+..+.+++++|...+.+  +.+++|+.++++.+..+..+.   ++++.+...........++..+......+.
T Consensus       155 ~~~~~~~~~~~~~~L~~A~~~~~~--~~~~~Ll~~g~~~~~~~~~~~---t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~  229 (408)
T d1n11a_         155 DAHPNAAGKNGLTPLHVAVHHNNL--DIVKLLLPRGGSPHSPAWNGY---TPLHIAAKQNQVEVARSLLQYGGSANAESV  229 (408)
T ss_dssp             TCCTTCCCSSCCCHHHHHHHTTCH--HHHHHHGGGTCCSCCCCTTCC---CHHHHHHHTTCHHHHHHHHHTTCCTTCCCT
T ss_pred             CCCCCCCCCCCCHHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCCC---CCCHHHHCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf             998886787674099999985999--999999865884004577899---710243202104555554320012212477


Q ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             99939999998299888999986799953038999977789998299999999997499999888999999999989999
Q 001410          698 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL  777 (1082)
Q Consensus       698 ~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhl  777 (1082)
                      .|.||||+|+..+...+++.++..+..++..+..|.|||+.|+..++.+++++|++.|++++..      +..+.|||+.
T Consensus       230 ~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~------~~~~~t~L~~  303 (408)
T d1n11a_         230 QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDAT------TRMGYTPLHV  303 (408)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCC------CSSCCCHHHH
T ss_pred             CCCCHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCC------CCCCCCCCHH
T ss_conf             8999999999808676754420022111112478997334543028489999999779965621------0234453022


Q ss_pred             HHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             9974979999999983897434457558898996999889----999999998227999999963100012321266556
Q 001410          778 ASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDNDESDVLSLKDSLTAICNA  853 (1082)
Q Consensus       778 Aa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa----~~~v~~Lle~~a~~~a~~~~e~~~slkdsltal~~A  853 (1082)
                      |+..++..+++++++.|+     +++.++..|.||+|.|.    .++++.|+++|++++.        .+++|.||++.|
T Consensus       304 ~~~~~~~~~~~~ll~~g~-----~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~--------~d~~G~t~L~~A  370 (408)
T d1n11a_         304 ASHYGNIKLVKFLLQHQA-----DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE--------VSSDGTTPLAIA  370 (408)
T ss_dssp             HHHSSCSHHHHHHHHTTC-----CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC--------CCSSSCCHHHHH
T ss_pred             HCCCCCCEEEEEECCCCC-----CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC--------CCCCCCCHHHHH
T ss_conf             100586213553013333-----2234689999999999986889999999987889988--------799998999999


Q ss_pred             HH
Q ss_conf             64
Q 001410          854 TQ  855 (1082)
Q Consensus       854 aq  855 (1082)
                      +.
T Consensus       371 ~~  372 (408)
T d1n11a_         371 KR  372 (408)
T ss_dssp             HH
T ss_pred             HH
T ss_conf             98

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.7e-31  Score=223.40  Aligned_cols=245  Identities=15%  Similarity=0.110  Sum_probs=210.5

Q ss_pred             CCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf             42534049917899999879986568999999716999995699645435542002889997555788998036679---
Q 001410          530 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL---  606 (1082)
Q Consensus       530 ~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l---  606 (1082)
                      ..+++..|+.+++..|++.|+.  ....+..|.+||++|+..++  .++++  +++..+++++..+..|  .+++++   
T Consensus       136 l~~a~~~~~~~~v~~ll~~~~~--~~~~~~~~~~~L~~A~~~~~--~~~~~--~Ll~~g~~~~~~~~~~--~t~l~~~~~  207 (408)
T d1n11a_         136 LHVAAKYGKVRVAELLLERDAH--PNAAGKNGLTPLHVAVHHNN--LDIVK--LLLPRGGSPHSPAWNG--YTPLHIAAK  207 (408)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC--TTCCCSSCCCHHHHHHHTTC--HHHHH--HHGGGTCCSCCCCTTC--CCHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCHHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCCCHHHHC
T ss_conf             9999875989999999976998--88678767409999998599--99999--9986588400457789--971024320


Q ss_pred             --HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHH
Q ss_conf             --899999998099998777636020999999961630678998876129987667574125999999998269999999
Q 001410          607 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK  684 (1082)
Q Consensus       607 --~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~  684 (1082)
                        ...+...|+............+.+++++++..+.  .+.++.++......+..+..+.   ++++.+...+...++++
T Consensus       208 ~~~~~~~~~l~~~~~~~~~~~~~~~t~l~~a~~~~~--~~~~~~~~~~~~~~~~~~~~g~---~~l~~a~~~~~~~i~~~  282 (408)
T d1n11a_         208 QNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGH--AEMVALLLSKQANGNLGNKSGL---TPLHLVAQEGHVPVADV  282 (408)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTC--HHHHHHHHTTTCCTTCCCTTCC---CHHHHHHHHTCHHHHHH
T ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC--HHHHHHHHCCCCCCCCCCCCCC---CHHHHHHHCCCHHHHHH
T ss_conf             210455555432001221247789999999998086--7675442002211111247899---73345430284899999


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             99789999855799993999999829988899998679995303899997778999829999999999749999988899
Q 001410          685 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP  764 (1082)
Q Consensus       685 Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp  764 (1082)
                      |++.|++++..+..+.||||.++..+..++++.++..|+++|.+|..|.||||+|+.+|+.++|++|+++||++++    
T Consensus       283 Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~----  358 (408)
T d1n11a_         283 LIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE----  358 (408)
T ss_dssp             HHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC----
T ss_pred             HHHCCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC----
T ss_conf             9977996562102344530221005862135530133332234689999999999986889999999987889988----


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             99999999899999974979999999983
Q 001410          765 SPEFPLSRTPSDLASSNGHKGISGFLAES  793 (1082)
Q Consensus       765 ~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~  793 (1082)
                        +|..|.||||+|+.+||.++|++|...
T Consensus       359 --~d~~G~t~L~~A~~~~~~~iv~~L~~~  385 (408)
T d1n11a_         359 --VSSDGTTPLAIAKRLGYISVTDVLKVV  385 (408)
T ss_dssp             --CCSSSCCHHHHHHHTTCHHHHHHHHHH
T ss_pred             --CCCCCCCHHHHHHHCCCHHHHHHHHHH
T ss_conf             --799998999999983999999999998

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2.7e-28  Score=204.15  Aligned_cols=213  Identities=20%  Similarity=0.124  Sum_probs=133.3

Q ss_pred             HHHCCCCCHHHHHHHH-CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             5340499178999998-799865689999997169999956996454355420028899975557889980366798999
Q 001410          532 WSCMFAEVEVPAEVLA-DGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRL  610 (1082)
Q Consensus       532 ~ac~fG~veVv~~LLq-~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l~~ri  610 (1082)
                      -.|..|+++.++.+++ .+.+  ....+..|+||||+||..|+  .++++  |+..........+.              
T Consensus         9 ~~a~~G~~~~v~~~l~~~~~~--~~~~D~~G~TpLh~Aa~~g~--~e~~~--~l~~~~~~~~~~~~--------------   68 (223)
T d1uoha_           9 NLAYSGKLEELKESILADKSL--ATRTDQDSRTALHWACSAGH--TEIVE--FLLQLGVPVNDKDD--------------   68 (223)
T ss_dssp             HHHHTTCHHHHHHHHHHCGGG--GGCCCTTSCCHHHHHHHHTC--HHHHH--HHHHHTCCSCCCCT--------------
T ss_pred             HHHHHCCHHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHHHH--HCCCC--CCCCCCCCCCCCCC--------------
T ss_conf             999969999999999949974--76748999888999998511--02433--22222333332222--------------


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCC
Q ss_conf             99998099998777636020999999961630678998876129987667574125999999998269999999997899
Q 001410          611 ERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGK  690 (1082)
Q Consensus       611 vkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Ga  690 (1082)
                                      .+.++++.+...++  .+.+++|++.+++.+..+..+.   ++++.+...+...++++|++.|+
T Consensus        69 ----------------~~~~~~~~~~~~~~--~~i~~~Ll~~~~d~~~~d~~g~---tpL~~A~~~~~~e~~~~Ll~~g~  127 (223)
T d1uoha_          69 ----------------AGWSPLHIAASAGR--DEIVKALLGKGAQVNAVNQNGC---TPLHYAASKNRHEIAVMLLEGGA  127 (223)
T ss_dssp             ----------------TCCCHHHHHHHHTC--HHHHHHHHHTTCCTTCCCTTCC---CHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             ----------------CCCCCCCCCCCCCC--CCHHHHHHCCCCEEEEECCCCC---CHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             ----------------22233222222111--1016777406864675489999---66269887698999999998789


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             99855799993999999829988899998679995303899997778999829999999999749999988899999999
Q 001410          691 GPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL  770 (1082)
Q Consensus       691 din~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~  770 (1082)
                      +++.++..|.||||+|+..++..++++|+..|++++.+|..|+||||+|+..|+.++|++|++.||+++.      +|..
T Consensus       128 d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~------~d~~  201 (223)
T d1uoha_         128 NPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYI------ENKE  201 (223)
T ss_dssp             CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCTT
T ss_pred             CCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCEEEECCCCCCCEECCCCCCCCHHHHHHHHHCCCCCCC------CCCC
T ss_conf             9987689999501023213874202332022320120368887411210025849999999987799988------7999


Q ss_pred             CCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             9989999997497999999998
Q 001410          771 SRTPSDLASSNGHKGISGFLAE  792 (1082)
Q Consensus       771 G~TPLhlAa~~Gh~eiv~~Lle  792 (1082)
                      |+||||+| ..|+.+++++|++
T Consensus       202 g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         202 EKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             SCCHHHHC-CTTHHHHHHHHHC
T ss_pred             CCCHHHHH-HCCCHHHHHCCCC
T ss_conf             99999998-7789999830047

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=5.1e-27  Score=195.53  Aligned_cols=258  Identities=14%  Similarity=0.042  Sum_probs=200.0

Q ss_pred             CCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf             42534049917899999879986568999999716999995699645435542002889997555788998036679---
Q 001410          530 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL---  606 (1082)
Q Consensus       530 ~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l---  606 (1082)
                      +.+||..|+++++..||+.|++.. ...+..|.||||+|+.+++  .+++.  ++...+...+..+..+  .++...   
T Consensus         9 L~~Ai~~~~~e~vk~Ll~~G~din-~~~~~~g~tpL~~A~~~~~--~eiv~--~L~~~~~~~~~~~~~~--~~~~~~~~~   81 (285)
T d1wdya_           9 LIKAVQNEDVDLVQQLLEGGANVN-FQEEEGGWTPLHNAVQMSR--EDIVE--LLLRHGADPVLRKKNG--ATPFLLAAI   81 (285)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTT-CCCTTTCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTC--CCHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHCCC--HHHHH--HHCCCCCCCCCCCCCC--CHHHHHHHH
T ss_conf             999998299999999998798968-2489999799999998599--98865--5202343222222111--114677764


Q ss_pred             --HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCC-------HHHHHHHHHHHHC
Q ss_conf             --8999999980999987776360209999999616306789988761299876675741-------2599999999826
Q 001410          607 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVE-------KYQILQKIMKEKL  677 (1082)
Q Consensus       607 --~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~-------~~~~l~~~a~~~~  677 (1082)
                        ......+++............+.+.++.+...+..  ..+..++....+.+.......       .+.++++.+...+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~  159 (285)
T d1wdya_          82 AGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKV--KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG  159 (285)
T ss_dssp             HTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCH--HHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHT
T ss_pred             CCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCH--HHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCC
T ss_conf             3875322113431022101356898636788874001--25445443100113232101222220146856999999868


Q ss_pred             HHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCC----CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             9999999997-89999855799993999999829----988899998679995303899997778999829999999999
Q 001410          678 YSWLLRKVCE-DGKGPCILDDEGQGVLHLAASLG----YDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLL  752 (1082)
Q Consensus       678 ~~~lv~~Ll~-~Gadin~~d~~G~TpLHlAa~~G----~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL  752 (1082)
                      ...+++.|++ .|++++..+..|.++++.+...+    ...+++.|++.|++++.+|..|.||||+|+..|+.++|++||
T Consensus       160 ~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL  239 (285)
T d1wdya_         160 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL  239 (285)
T ss_dssp             CHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCHHHHHHHH
T ss_conf             99999999845698945546789833223322343017999999999779998866899998241122138699999999


Q ss_pred             H-CCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf             7-499999888999999999989999997497999999998389743445755889
Q 001410          753 S-LGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDS  807 (1082)
Q Consensus       753 ~-~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~  807 (1082)
                      . .|++++.      +|..|.||||+|+..|+.+++++|+++|++     ++++|.
T Consensus       240 ~~~g~din~------~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd-----~n~~d~  284 (285)
T d1wdya_         240 EQEHIEIND------TDSDGKTALLLAVELKLKKIAELLCKRGAS-----TDCGDL  284 (285)
T ss_dssp             HSSSCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSSC-----SCCSSC
T ss_pred             HCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCC
T ss_conf             808999868------799998999999985979999999987989-----986017

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.96  E-value=1.1e-28  Score=206.69  Aligned_cols=233  Identities=12%  Similarity=0.001  Sum_probs=163.4

Q ss_pred             CCCCHHHCCCCCHHHHHHHHCCCCCC-CCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             34425340499178999998799865-68999999716999995699645435542002889997555788998036679
Q 001410          528 AKCKWSCMFAEVEVPAEVLADGVLCC-RIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL  606 (1082)
Q Consensus       528 ~~~~~ac~fG~veVv~~LLq~GvlrC-~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l  606 (1082)
                      +.+++||..|+.+++..||+.|+... ....+..|.||||+||.+|+  .++++  +++..|++++..+..|  .+++++
T Consensus        11 t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~--~~iv~--~Ll~~ga~i~~~d~~g--~tpL~~   84 (255)
T d1oy3d_          11 TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGE--ASTVE--KLYAAGAGVLVAERGG--HTALHL   84 (255)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTC--HHHHH--HHHHTTCCSSCCCTTS--CCHHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCC--CCCCC--CCCCCCCCCCCCCCCC--CHHHHH
T ss_conf             89999998588999999998699900115758999972406876245--43232--2223333322322222--102333


Q ss_pred             -----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHH
Q ss_conf             -----899999998099998777636020999999961630678998876129987667574125999999998269999
Q 001410          607 -----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWL  681 (1082)
Q Consensus       607 -----~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~l  681 (1082)
                           +..++++|+................                    ........    .....+............
T Consensus        85 A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~--------------------~~~~~~~~----~~~~~~~~~~~~~~~~~~  140 (255)
T d1oy3d_          85 ACRVRAHTCACVLLQPRPSHPRDASDTYLT--------------------QSQDCTPD----TSHAPAAVDSQPNPENEE  140 (255)
T ss_dssp             HTTTTCHHHHHHHSSSCCSSCCCC--------------------------------------------------------
T ss_pred             HHCCCCHHHHHHHHHHCCCHHCCCCHHHHH--------------------HHHHHCCC----CHHHHHHHHHHCCHHHHH
T ss_conf             322682589999986142010122025666--------------------77652243----067799998620306789


Q ss_pred             HHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC
Q ss_conf             9999978999985579999399999982998889999867999530-389999777899982999999999974999998
Q 001410          682 LRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINF-RDLSGWTALHWAAYCGREKTVAVLLSLGAAPGL  760 (1082)
Q Consensus       682 v~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~-~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna  760 (1082)
                      .......+.+++.++..|.||||+|+..|+.+++++|++.+++++. .+..|+||||+|+..|+.+++++|+++|++++.
T Consensus       141 ~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~  220 (255)
T d1oy3d_         141 EPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA  220 (255)
T ss_dssp             ---CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCC
T ss_conf             98765328663310046763223332232222221000013331221334443322001233399999999987899888


Q ss_pred             CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             889999999999899999974979999999983897
Q 001410          761 LTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  796 (1082)
Q Consensus       761 ~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~  796 (1082)
                            +|..|.||||+|+..|+.+++++|+++|+.
T Consensus       221 ------~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         221 ------RMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             ------CCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             ------CCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             ------799999999999987889999999976989

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.4e-26  Score=192.55  Aligned_cols=199  Identities=15%  Similarity=0.108  Sum_probs=168.7

Q ss_pred             HHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCC
Q ss_conf             99980999987776360209999999616306789988761299876675741259999999982699999999978999
Q 001410          612 RILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKG  691 (1082)
Q Consensus       612 kLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gad  691 (1082)
                      ++|...+...+..+..|.+++|+|+..++.  +.+++++..+..........   .++...+...++..+++.|++.|++
T Consensus        21 ~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~--e~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~~Ll~~~~d   95 (223)
T d1uoha_          21 ESILADKSLATRTDQDSRTALHWACSAGHT--EIVEFLLQLGVPVNDKDDAG---WSPLHIAASAGRDEIVKALLGKGAQ   95 (223)
T ss_dssp             HHHHHCGGGGGCCCTTSCCHHHHHHHHTCH--HHHHHHHHHTCCSCCCCTTC---CCHHHHHHHHTCHHHHHHHHHTTCC
T ss_pred             HHHHHCCCCCCCCCCCCCCHHHHHHHHHHH--CCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCHHHHHHCCCCE
T ss_conf             999949974767489998889999985110--24332222233333222222---2332222221111016777406864


Q ss_pred             CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC
Q ss_conf             98557999939999998299888999986799953038999977789998299999999997499999888999999999
Q 001410          692 PCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLS  771 (1082)
Q Consensus       692 in~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G  771 (1082)
                      ++..|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+..|++++.      +|..|
T Consensus        96 ~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i~~------~d~~g  169 (223)
T d1uoha_          96 VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNI------QDTEG  169 (223)
T ss_dssp             TTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC------CCTTC
T ss_pred             EEEECCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHCCCCCEEEE------CCCCC
T ss_conf             675489999662698876989999999987899987689999501023213874202332022320120------36888


Q ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             98999999749799999999838974344575588989969998899999999982
Q 001410          772 RTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEK  827 (1082)
Q Consensus       772 ~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~~~v~~Lle~  827 (1082)
                      +||||+|+..|+.+++++|++.|++     ++.+|..|.||+++|. .++..++..
T Consensus       170 ~TpL~~Aa~~g~~~~v~~LL~~Gad-----~~~~d~~g~tpl~~A~-~~~~~i~~~  219 (223)
T d1uoha_         170 NTPLHLACDEERVEEAKLLVSQGAS-----IYIENKEEKTPLQVAK-GGLGLILKR  219 (223)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHTTCC-----SCCCCTTSCCHHHHCC-TTHHHHHHH
T ss_pred             CCEECCCCCCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHH-CCCHHHHHC
T ss_conf             7411210025849999999987799-----9887999999999987-789999830

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.95  E-value=1.2e-27  Score=199.80  Aligned_cols=236  Identities=18%  Similarity=0.181  Sum_probs=186.5

Q ss_pred             CCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH---
Q ss_conf             42534049917899999879986568999999716999995699645435542002889997555788998036679---
Q 001410          530 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL---  606 (1082)
Q Consensus       530 ~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l---  606 (1082)
                      +.+||..|+++++..||+.|++  .+..+..|.||||+|+.+|+  .+++.  +++..+.+....+..+  .++++.   
T Consensus        44 l~~A~~~G~~~~v~~Ll~~Gad--vn~~d~~G~T~L~~A~~~g~--~eiv~--~Ll~~~~~~~~~~~~~--~~~L~~a~~  115 (291)
T d1s70b_          44 FLAACSSGDTEEVLRLLERGAD--INYANVDGLTALHQACIDDN--VDMVK--FLVENGANINQPDNEG--WIPLHAAAS  115 (291)
T ss_dssp             HHHHHHHTCHHHHHHHHHHCCC--TTCBCTTCCBHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--CCHHHHHHH
T ss_pred             HHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCC--CEEEE--EECCCCCCCCCCCCCC--CCCCCCCCC
T ss_conf             9999985889999999987999--88668999969999986197--31211--0012223333322232--333333322


Q ss_pred             --HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHH
Q ss_conf             --899999998099998777636020999999961630678998876129987667574125999999998269999999
Q 001410          607 --HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRK  684 (1082)
Q Consensus       607 --~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~  684 (1082)
                        +.++++.|+..+......+..+.++++++...+.  .+.+..++........         .................
T Consensus       116 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~--~~~~~~ll~~~~~~~~---------~~~~~~~~~~~~~~~~~  184 (291)
T d1s70b_         116 CGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM--EELLQNEVNRQGVDIE---------AARKEEERIMLRDARQW  184 (291)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHH--HHHHHHHHHHHTCCHH---------HHHHHHHHHHHHHHHHH
T ss_pred             CCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CHHCCCCCCCCCCCCC---------CCCCCCCCCCCCCCHHH
T ss_conf             221100110124676422222467642222111222--0001000002465321---------10000133322110011


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC
Q ss_conf             99789999855799993999999829988899998679995303899997778999829999999999749999988899
Q 001410          685 VCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDP  764 (1082)
Q Consensus       685 Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp  764 (1082)
                      +.....+....+..|.||||.|+..|+.++++.|+..|+++|.++..|+||||+|+..|+.++|++|+++||++++    
T Consensus       185 ~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~----  260 (291)
T d1s70b_         185 LNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEA----  260 (291)
T ss_dssp             HHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC----
T ss_pred             HCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC----
T ss_conf             0123211002467898730488876995441013441011242125798899999985989999999987999988----


Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHCC
Q ss_conf             999999998999999749799999999838
Q 001410          765 SPEFPLSRTPSDLASSNGHKGISGFLAESS  794 (1082)
Q Consensus       765 ~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g  794 (1082)
                        +|..|.||||+|+.    +++++|.+..
T Consensus       261 --~d~~G~TaL~~A~e----~~~~~L~~~~  284 (291)
T d1s70b_         261 --VNKVGQTAFDVADE----DILGYLEELQ  284 (291)
T ss_dssp             --CCTTSCCTTTSCCS----GGGHHHHHHH
T ss_pred             --CCCCCCCHHHHHHH----HHHHHHHHHH
T ss_conf             --68999999999999----8999999986

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.95  E-value=2.7e-27  Score=197.35  Aligned_cols=223  Identities=19%  Similarity=0.205  Sum_probs=169.5

Q ss_pred             CCCHHHCCCCCHHHHHHHHC-CCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             44253404991789999987-99865689999997169999956996454355420028899975557889980366798
Q 001410          529 KCKWSCMFAEVEVPAEVLAD-GVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLH  607 (1082)
Q Consensus       529 ~~~~ac~fG~veVv~~LLq~-GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l~  607 (1082)
                      +++|||+.|+++++..|+.. +.+  ....+..|+||||+|+..|+  .++++  +++..+++++..+..+         
T Consensus         3 pLh~A~~~g~~~~v~~Ll~~~~~~--~~~~d~~G~TpL~~A~~~g~--~~iv~--~Ll~~ga~~~~~~~~~---------   67 (229)
T d1ixva_           3 PLHQACMENEFFKVQELLHSKPSL--LLQKDQDGRIPLHWSVSFQA--HEITS--FLLSKMENVNLDDYPD---------   67 (229)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHCGGG--TTCCCTTSCCHHHHHHHTTC--HHHHH--HHHTTCTTCCGGGCCC---------
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCCC--CCCCCCCCCCHHHHHHHCCC--CCCCC--HHHHHHCCCCCCCCCC---------
T ss_conf             699999868999999999809986--65659999989999998699--65441--3544301233322232---------


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf             99999998099998777636020999999961630678998876129987667574125999999998269999999997
Q 001410          608 LRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE  687 (1082)
Q Consensus       608 ~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~  687 (1082)
                                        ..+.++++++.....+  +.+..++..+......... ....++...+.......++..|+.
T Consensus        68 ------------------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~~l~~  126 (229)
T d1ixva_          68 ------------------DSGWTPFHIACSVGNL--EVVKSLYDRPLKPDLNKIT-NQGVTCLHLAVGKKWFEVSQFLIE  126 (229)
T ss_dssp             ------------------TTSCCHHHHHHHHTCH--HHHHHHHSSSSCCCTTCCC-TTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             ------------------CCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             ------------------2222222211112332--3333322222222222232-233443322123200343222211


Q ss_pred             CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH-CCCCCCCCCCCC
Q ss_conf             89999855799993999999829988899998679-9953038999977789998299999999997-499999888999
Q 001410          688 DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAG-VSINFRDLSGWTALHWAAYCGREKTVAVLLS-LGAAPGLLTDPS  765 (1082)
Q Consensus       688 ~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~G-adin~~D~~G~TpLH~AA~~G~~eiV~~LL~-~GAdvna~tdp~  765 (1082)
                      .|...+..+..|.||||+|+..|+..+++.|+..| .+++.+|..|+||||+|+..|+.++|++||+ .|+++++     
T Consensus       127 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~-----  201 (229)
T d1ixva_         127 NGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDL-----  201 (229)
T ss_dssp             TTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCC-----
T ss_pred             HCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCCCCCC-----
T ss_conf             002321247889973502321245332333322222222235666678102210125199999999965999888-----


Q ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             9999999899999974979999999983897
Q 001410          766 PEFPLSRTPSDLASSNGHKGISGFLAESSLT  796 (1082)
Q Consensus       766 ~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~  796 (1082)
                       +|..|+||||+|+.   .+++++|+++|++
T Consensus       202 -~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         202 -VDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             -CCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             -CCCCCCCHHHHHHH---HHHHHHHHHCCCC
T ss_conf             -58999999999846---7899999976999

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.95  E-value=5.3e-26  Score=188.69  Aligned_cols=233  Identities=12%  Similarity=0.083  Sum_probs=148.4

Q ss_pred             CCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCC---CCCCCCCCCCCCHHHH-----HHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             9999971699999569964543554200288999---7555788998036679-----8999999980999987776360
Q 001410          557 PHAVGRVPFYITCSNRLACSEVREFDYIVGSVKD---ADISDIYGSSTSESFL-----HLRLERILSMRSSPQNHLSEGL  628 (1082)
Q Consensus       557 ~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~---in~~d~~g~~~t~L~l-----~~rivkLLl~~g~~~~~~~~~g  628 (1082)
                      .++.|.||||+||..++  .++++  +++.++++   ++..+..|  .|+||+     +.+++++|+..|+..+..+..|
T Consensus         5 i~~~G~t~Lh~A~~~~~--~~~v~--~Ll~~~a~~~~i~~~~~~g--~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g   78 (255)
T d1oy3d_           5 VTEDGDTALHLAVIHQH--EPFLD--FLLGFSAGHEYLDLQNDLG--QTALHLAAILGEASTVEKLYAAGAGVLVAERGG   78 (255)
T ss_dssp             CCTTCCCHHHHHHHTTC--HHHHH--HHHHHHTTSGGGGCCCTTS--CCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTS
T ss_pred             CCCCCCCHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCCCCC--CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             89599789999998588--99999--9998699900115758999--972406876245432322223333322322222


Q ss_pred             CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             20999999961630678998876129987667574125999999998269999999997899998557999939999998
Q 001410          629 CEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS  708 (1082)
Q Consensus       629 ~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~  708 (1082)
                      .+++++|...+.  .+.+++|++......... ..   ...... ...                  .......++.....
T Consensus        79 ~tpL~~A~~~~~--~~~~~~Ll~~~~~~~~~~-~~---~~~~~~-~~~------------------~~~~~~~~~~~~~~  133 (255)
T d1oy3d_          79 HTALHLACRVRA--HTCACVLLQPRPSHPRDA-SD---TYLTQS-QDC------------------TPDTSHAPAAVDSQ  133 (255)
T ss_dssp             CCHHHHHTTTTC--HHHHHHHSSSCCSSCCCC------------------------------------------------
T ss_pred             CHHHHHHHCCCC--HHHHHHHHHHCCCHHCCC-CH---HHHHHH-HHH------------------CCCCHHHHHHHHHH
T ss_conf             102333322682--589999986142010122-02---566677-652------------------24306779999862


Q ss_pred             CCC-HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHH
Q ss_conf             299-8889999867999530389999777899982999999999974999998889999999999899999974979999
Q 001410          709 LGY-DWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGIS  787 (1082)
Q Consensus       709 ~G~-~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv  787 (1082)
                      ... ......+...+.+++.+|..|+||||+||..|+.+++++|++.|++++..     ++..|.||||+|+..|+.+++
T Consensus       134 ~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~g~TpL~~A~~~~~~~~v  208 (255)
T d1oy3d_         134 PNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP-----EPTCGRTPLHLAVEAQAASVL  208 (255)
T ss_dssp             ----------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCC-----CTTTCCCHHHHHHHTTCHHHH
T ss_pred             CCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCC-----CCCCCCCCCCCCCCCCHHHHH
T ss_conf             030678998765328663310046763223332232222221000013331221-----334443322001233399999


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHCCC
Q ss_conf             999983897434457558898996999889----9999999982279
Q 001410          788 GFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTAT  830 (1082)
Q Consensus       788 ~~Lle~g~~~~~adln~~d~~g~tal~~aa----~~~v~~Lle~~a~  830 (1082)
                      ++|+++|+     +++.++..|.||++.|.    .++++.|+++||.
T Consensus       209 ~~Ll~~ga-----din~~d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         209 ELLLKAGA-----DPTARMYGGRTPLGSALLRPNPILARLLRAHGAP  250 (255)
T ss_dssp             HHHHHTTC-----CTTCCCTTSCCHHHHHHTSSCHHHHHHHHHTTCC
T ss_pred             HHHHHCCC-----CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
T ss_conf             99998789-----9888799999999999987889999999976989

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.95  E-value=1.1e-26  Score=193.31  Aligned_cols=242  Identities=18%  Similarity=0.110  Sum_probs=180.9

Q ss_pred             HHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEE------ECCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             534049917899999879986568999999716999995699645435542------00288999755578899803667
Q 001410          532 WSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFD------YIVGSVKDADISDIYGSSTSESF  605 (1082)
Q Consensus       532 ~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~fe------yl~~~~a~in~~d~~g~~~t~L~  605 (1082)
                      .++ -|..++...|.+.++.  ... ...|+||||+||.+|+  .++++++      +++..|+++|..+.+|  .||||
T Consensus         8 ~~~-~~~~~~~~~l~~~~~n--~~~-~~~g~T~Lh~A~~~g~--~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G--~TpLh   79 (277)
T d2fo1e1           8 TEA-AGSYAITEPITRESVN--IID-PRHNRTVLHWIASNSS--AEKSEDLIVHEAKECIAAGADVNAMDCDE--NTPLM   79 (277)
T ss_dssp             HHH-HSSSCCCSCCSTTTTT--TCC-CSSCCCHHHHHHCTTC--CSCCTTHHHHHHHHHHHTCCCTTCCCTTS--CCHHH
T ss_pred             HHH-CCCHHHHHHHHHCCCC--CCC-CCCCCCHHHHHHHCCC--HHHHHHHHHCCHHHHHHCCCCCCCCCCCC--CEEEC
T ss_conf             981-7988899999866998--677-9999669999998689--99999999652367987699764547888--85100


Q ss_pred             H-----HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHC---CCCCCCCCCCCHHHHHHHHHHH--
Q ss_conf             9-----89999999809999877763602099999996163067899887612---9987667574125999999998--
Q 001410          606 L-----HLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEA---NPEKNLSQHVEKYQILQKIMKE--  675 (1082)
Q Consensus       606 l-----~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~g---ad~n~~s~~~~~~~~l~~~a~~--  675 (1082)
                      +     +.+++++|+..|++.+..+..|.++++.+...+..  +....+....   ..++..+....   +....+..  
T Consensus        80 ~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~--~~~~~l~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  154 (277)
T d2fo1e1          80 LAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF--GMMVYMLNSTKLKGDIEELDRNGM---TALMIVAHNE  154 (277)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCH--HHHHHHTTSHHHHHTTSCCCTTSC---CHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCH--HHHHHHHHCCCCCCCCCCCCCCCC---HHHHHHHHCC
T ss_conf             34333333333333223222332222222222100110000--123444311454222222222110---3678887503


Q ss_pred             -HCHHHHHHHHHHCC--------CCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf             -26999999999789--------999855799993999999829988899998-67999530389999777899982999
Q 001410          676 -KLYSWLLRKVCEDG--------KGPCILDDEGQGVLHLAASLGYDWAIKPTV-TAGVSINFRDLSGWTALHWAAYCGRE  745 (1082)
Q Consensus       676 -~~~~~lv~~Ll~~G--------adin~~d~~G~TpLHlAa~~G~~~iv~~LL-~~Gadin~~D~~G~TpLH~AA~~G~~  745 (1082)
                       ......+..+....        ...+..+..|.|+||+++..++...+..++ ..+.+++.+|..|+||||+|+..|+.
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~tpL~~A~~~g~~  234 (277)
T d2fo1e1         155 GRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRI  234 (277)
T ss_dssp             STTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCH
T ss_conf             43322222100112332222223455544668987000012233322222322234543334689999899999985989


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             99999997499999888999999999989999997497999999998
Q 001410          746 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAE  792 (1082)
Q Consensus       746 eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle  792 (1082)
                      ++|++|+++|+++++      +|..|.||||+|+.+|+.+++++|++
T Consensus       235 ~iv~~Ll~~gadin~------~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         235 EVVMYLIQQGASVEA------VDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             HHHHHHHHTTCCSSC------CCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf             999999987699988------69999999999998598999999997

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=7.7e-24  Score=174.09  Aligned_cols=255  Identities=15%  Similarity=0.058  Sum_probs=204.8

Q ss_pred             CCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHH-----HHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf             99716999995699645435542002889997555788998036679-----8999999980999987776360209999
Q 001410          560 VGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFL-----HLRLERILSMRSSPQNHLSEGLCEKQKL  634 (1082)
Q Consensus       560 ~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l-----~~rivkLLl~~g~~~~~~~~~g~t~lh~  634 (1082)
                      .|.++|+.|+.+|+  .++++  +++..|++++..+..+ +.||+|+     +.+++++|+..+.........+..+.+.
T Consensus         4 ~~~~~L~~Ai~~~~--~e~vk--~Ll~~G~din~~~~~~-g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~~~~~~   78 (285)
T d1wdya_           4 EDNHLLIKAVQNED--VDLVQ--QLLEGGANVNFQEEEG-GWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFLL   78 (285)
T ss_dssp             HHHHHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTT-CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHH
T ss_pred             CCCHHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC-CCCHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCHHHHH
T ss_conf             88489999998299--99999--9998798968248999-9799999998599988655202343222222111114677


Q ss_pred             HHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCC----------CCCCCCHHH
Q ss_conf             9996163067899887612998766757412599999999826999999999789999855----------799993999
Q 001410          635 ISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCIL----------DDEGQGVLH  704 (1082)
Q Consensus       635 a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~----------d~~G~TpLH  704 (1082)
                      +...+..  +....++....+....+..+.   +....+...+...++..++....+++..          +..|.||||
T Consensus        79 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~  153 (285)
T d1wdya_          79 AAIAGSV--KLLKLFLSKGADVNECDFYGF---TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALM  153 (285)
T ss_dssp             HHHHTCH--HHHHHHHHTTCCTTCBCTTCC---BHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHH
T ss_pred             HHHCCCC--CCCCHHHHHCCCCCCCCCCCC---CHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCHHHH
T ss_conf             7643875--322113431022101356898---63678887400125445443100113232101222220146856999


Q ss_pred             HHHHCCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHCC----CHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99982998889999867-9995303899997778999829----999999999749999988899999999998999999
Q 001410          705 LAASLGYDWAIKPTVTA-GVSINFRDLSGWTALHWAAYCG----REKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLAS  779 (1082)
Q Consensus       705 lAa~~G~~~iv~~LL~~-Gadin~~D~~G~TpLH~AA~~G----~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa  779 (1082)
                      +|+..|+.++++.|+.. |++++..+..|.++++.+...+    ...+++.|++.|++++.      +|..|.||||+|+
T Consensus       154 ~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~------~~~~g~t~L~~a~  227 (285)
T d1wdya_         154 DAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNV------RGERGKTPLILAV  227 (285)
T ss_dssp             HHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCCSSC------CCTTSCCHHHHHH
T ss_pred             HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCC------CCCCCCCCCCHHH
T ss_conf             9998689999999984569894554678983322332234301799999999977999886------6899998241122


Q ss_pred             HCCCHHHHHHHHHC-CCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHCCCCCCCC
Q ss_conf             74979999999983-897434457558898996999889----999999998227999999
Q 001410          780 SNGHKGISGFLAES-SLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTATPANDN  835 (1082)
Q Consensus       780 ~~Gh~eiv~~Lle~-g~~~~~adln~~d~~g~tal~~aa----~~~v~~Lle~~a~~~a~~  835 (1082)
                      ..|+.+++++|++. |     ++++.++..|.||+++|.    .++++.|++.||++++.|
T Consensus       228 ~~~~~~~v~~lL~~~g-----~din~~d~~G~TpL~~A~~~~~~eiv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         228 EKKHLGLVQRLLEQEH-----IEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGD  283 (285)
T ss_dssp             HTTCHHHHHHHHHSSS-----CCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCSCCSS
T ss_pred             HCCCHHHHHHHHHCCC-----CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
T ss_conf             1386999999998089-----9986879999899999998597999999998798998601

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.93  E-value=2.5e-25  Score=184.17  Aligned_cols=219  Identities=15%  Similarity=0.100  Sum_probs=155.0

Q ss_pred             CCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             97169999956996454355420028899975557889980366798999999980999987776360209999999616
Q 001410          561 GRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQ  640 (1082)
Q Consensus       561 G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~  640 (1082)
                      |.|+|+.||..|+  .++++  +++..|+++|..+.+|  .|+                            +|+|+..++
T Consensus        40 ~~t~l~~A~~~G~--~~~v~--~Ll~~Gadvn~~d~~G--~T~----------------------------L~~A~~~g~   85 (291)
T d1s70b_          40 DGAVFLAACSSGD--TEEVL--RLLERGADINYANVDG--LTA----------------------------LHQACIDDN   85 (291)
T ss_dssp             HHHHHHHHHHHTC--HHHHH--HHHHHCCCTTCBCTTC--CBH----------------------------HHHHHHTTC
T ss_pred             CCHHHHHHHHCCC--HHHHH--HHHHCCCCCCCCCCCC--CCH----------------------------HHHHHHCCC
T ss_conf             9669999998588--99999--9998799988668999--969----------------------------999986197


Q ss_pred             CCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHH
Q ss_conf             30678998876129987667574125999999998269999999997899998557999939999998299888999986
Q 001410          641 LKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVT  720 (1082)
Q Consensus       641 l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~  720 (1082)
                      .  +.+++|++++.+.......+   .++++.+...+...+++.|++.|+..+..+..|.+++++|+..+....+..++.
T Consensus        86 ~--eiv~~Ll~~~~~~~~~~~~~---~~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ll~  160 (291)
T d1s70b_          86 V--DMVKFLVENGANINQPDNEG---WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVN  160 (291)
T ss_dssp             H--HHHHHHHHTTCCTTCCCTTS---CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHH
T ss_pred             C--EEEEEECCCCCCCCCCCCCC---CCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCC
T ss_conf             3--12110012223333322232---333333322221100110124676422222467642222111222000100000


Q ss_pred             ---------------------------CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             ---------------------------79995303899997778999829999999999749999988899999999998
Q 001410          721 ---------------------------AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRT  773 (1082)
Q Consensus       721 ---------------------------~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~T  773 (1082)
                                                 ...+....+..|.||||+|+..|+.++++.|+..|++++.      ++..|+|
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~------~~~~g~T  234 (291)
T d1s70b_         161 RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNI------KDYDGWT  234 (291)
T ss_dssp             HHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTC------CCTTCCC
T ss_pred             CCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHCCCCCCEECCCC------CCCCCCC
T ss_conf             2465321100001333221100110123211002467898730488876995441013441011242------1257988


Q ss_pred             HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
Q ss_conf             99999974979999999983897434457558898996999889999999998227
Q 001410          774 PSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTA  829 (1082)
Q Consensus       774 PLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~~~v~~Lle~~a  829 (1082)
                      |||+|+..|+.+++++|+++|++     ++++|..|.||+++|+..++..|.+...
T Consensus       235 pL~~A~~~g~~~iv~lLl~~Gad-----v~~~d~~G~TaL~~A~e~~~~~L~~~~~  285 (291)
T d1s70b_         235 PLHAAAHWGKEEACRILVENLCD-----MEAVNKVGQTAFDVADEDILGYLEELQK  285 (291)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCTTTSCCSGGGHHHHHHHH
T ss_pred             HHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf             99999985989999999987999-----9886899999999999989999999863

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.93  E-value=2.3e-25  Score=184.36  Aligned_cols=206  Identities=17%  Similarity=0.127  Sum_probs=158.4

Q ss_pred             CHHHHHHHHCCCCCCCCC-CCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf             178999998799865689-9999971699999569964543554200288999755578899803667989999999809
Q 001410          539 VEVPAEVLADGVLCCRIP-PHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMR  617 (1082)
Q Consensus       539 veVv~~LLq~GvlrC~~p-~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l~~rivkLLl~~  617 (1082)
                      -+|+..||+.|++  .+. .+..|.||||+||.+|+  .++++  +++..+++++..+..+  .+++             
T Consensus         2 ~~~v~~Ll~~g~d--in~~~d~~G~t~L~~A~~~g~--~e~v~--~Ll~~g~~~n~~~~~~--~~~~-------------   60 (209)
T d1ot8a_           2 AQVISDLLAQGAE--LNATMDKTGETSLHLAARFAR--ADAAK--RLLDAGADANSQDNTG--RTPL-------------   60 (209)
T ss_dssp             HHHHHHHHHHHHH--HHHHHHHHCCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS--CCHH-------------
T ss_pred             HHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHCCC--HHHHH--HHHHHCCCCCCCCCCC--CCCC-------------
T ss_conf             8999999987898--686769999889999998399--99999--9875022332222222--2222-------------


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCC
Q ss_conf             99987776360209999999616306789988761299876675741259999999982699999999978999985579
Q 001410          618 SSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDD  697 (1082)
Q Consensus       618 g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~  697 (1082)
                                     +.+......  .................  ...+......+.......+.+.|...+++++..+.
T Consensus        61 ---------------~~~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~  121 (209)
T d1ot8a_          61 ---------------HAAVAADAM--GVFQILLRNRATNLNAR--MHDGTTPLILAARLAIEGMVEDLITADADINAADN  121 (209)
T ss_dssp             ---------------HHHHHTTCH--HHHHHHHTCTTCCTTCC--CTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCT
T ss_pred             ---------------CCCCCCCCC--CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCC
T ss_conf             ---------------222222222--22222222222223222--22233322222222101235555310146555577


Q ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHH
Q ss_conf             99939999998299888999986799953038999977789998299999999997499999888999999999989999
Q 001410          698 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDL  777 (1082)
Q Consensus       698 ~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhl  777 (1082)
                      .|.||||.++..+...++..++..+++++.+|..|.||||+||..|+.++|++||++||+++.      +|..|+||||+
T Consensus       122 ~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~------~d~~g~Tpl~~  195 (209)
T d1ot8a_         122 SGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREI------TDHMDRLPRDV  195 (209)
T ss_dssp             TSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHH
T ss_pred             CCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHCCCCCCC------CCCCCCCHHHH
T ss_conf             999823000036863145320122223454434445521121032499999999987999988------68999999999


Q ss_pred             HHHCCCHHHHHHH
Q ss_conf             9974979999999
Q 001410          778 ASSNGHKGISGFL  790 (1082)
Q Consensus       778 Aa~~Gh~eiv~~L  790 (1082)
                      |+.+|+.++|++|
T Consensus       196 A~~~~~~~iv~lL  208 (209)
T d1ot8a_         196 ASERLHHDIVRLL  208 (209)
T ss_dssp             HHHTTCHHHHHHH
T ss_pred             HHHCCCHHHHHHC
T ss_conf             9986879899643

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.93  E-value=5.9e-24  Score=174.90  Aligned_cols=222  Identities=14%  Similarity=0.060  Sum_probs=179.3

Q ss_pred             HHHHHHHHCCCCCCCEEEEEECCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCC
Q ss_conf             169999956996454355420028-8999755578899803667989999999809999877763602099999996163
Q 001410          563 VPFYITCSNRLACSEVREFDYIVG-SVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQL  641 (1082)
Q Consensus       563 tPL~vA~~ng~~csevv~feyl~~-~~a~in~~d~~g~~~t~L~l~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l  641 (1082)
                      +|||.||..|+  .+++.  .++. .+..++.                              .+..|.+++|+|+..+..
T Consensus         2 ~pLh~A~~~g~--~~~v~--~Ll~~~~~~~~~------------------------------~d~~G~TpL~~A~~~g~~   47 (229)
T d1ixva_           2 YPLHQACMENE--FFKVQ--ELLHSKPSLLLQ------------------------------KDQDGRIPLHWSVSFQAH   47 (229)
T ss_dssp             CHHHHHHHHTC--HHHHH--HHHHHCGGGTTC------------------------------CCTTSCCHHHHHHHTTCH
T ss_pred             HHHHHHHHCCC--HHHHH--HHHHCCCCCCCC------------------------------CCCCCCCHHHHHHHCCCC
T ss_conf             76999998689--99999--999809986656------------------------------599999899999986996


Q ss_pred             CHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCHHHHHHHH
Q ss_conf             06789988761299876675741259999999982699999999978999--9855799993999999829988899998
Q 001410          642 KEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKG--PCILDDEGQGVLHLAASLGYDWAIKPTV  719 (1082)
Q Consensus       642 ~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gad--in~~d~~G~TpLHlAa~~G~~~iv~~LL  719 (1082)
                        +++++|++.+++++..+..+..+.++.+.+.......+++.++..+..  ....+..+.++|+.++..++.++++.|+
T Consensus        48 --~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~  125 (229)
T d1ixva_          48 --EITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLI  125 (229)
T ss_dssp             --HHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             --CCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             --544135443012333222322222222211112332333332222222222223223344332212320034322221


Q ss_pred             HCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCC-CCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCC
Q ss_conf             679995303899997778999829999999999749-99998889999999999899999974979999999983-8974
Q 001410          720 TAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLG-AAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAES-SLTS  797 (1082)
Q Consensus       720 ~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~G-Advna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~-g~~~  797 (1082)
                      ..|.+++.+|..|+||||+|+..|+.++++.|+..| .+++.      +|..|.||||+|+..|+.+++++|++. |+  
T Consensus       126 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~------~d~~g~TpLh~A~~~~~~~~v~~Ll~~~ga--  197 (229)
T d1ixva_         126 ENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW------QDKQGWTPLFHALAEGHGDAAVLLVEKYGA--  197 (229)
T ss_dssp             HTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTTCCCSCC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHCC--
T ss_pred             HHCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC------CCCCCCCCHHHHCCCCCHHHHHHHHHHCCC--
T ss_conf             100232124788997350232124533233332222222223------566667810221012519999999996599--


Q ss_pred             CCCCCCCCCCCCCCHHHHHH-HHHHHHHHHHCCCC
Q ss_conf             34457558898996999889-99999999822799
Q 001410          798 LLLSLKMNDSADDGALEDSI-AKAVQTVSEKTATP  831 (1082)
Q Consensus       798 ~~adln~~d~~g~tal~~aa-~~~v~~Lle~~a~~  831 (1082)
                         +++.+|..|.||++++. ..+++.|++.|++.
T Consensus       198 ---d~~~~d~~g~t~l~~A~~~~~~~~Ll~~g~d~  229 (229)
T d1ixva_         198 ---EYDLVDNKGAKAEDVALNEQVKKFFLNNVVDA  229 (229)
T ss_dssp             ---CSCCCCTTSCCTGGGCSCHHHHHHHHHHCCCC
T ss_pred             ---CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf             ---98885899999999984678999999769999

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=4.7e-23  Score=168.79  Aligned_cols=194  Identities=17%  Similarity=0.106  Sum_probs=134.9

Q ss_pred             CCCHHHHHHHHCCCCCCCEEE--EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             997169999956996454355--420028899975557889980366798999999980999987776360209999999
Q 001410          560 VGRVPFYITCSNRLACSEVRE--FDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISK  637 (1082)
Q Consensus       560 ~G~tPL~vA~~ng~~csevv~--feyl~~~~a~in~~d~~g~~~t~L~l~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~  637 (1082)
                      +|.||||+|+.++.  .+++.  +.++...++++|..+.+|                              .+++|+|+.
T Consensus         1 dG~t~Lh~A~~~g~--~~~~~~li~~~~~~~~~in~~d~~g------------------------------~TpLh~A~~   48 (221)
T d1iknd_           1 DGDSFLHLAIIHEE--KALTMEVIRQVKGDLAFLNFQNNLQ------------------------------QTPLHLAVI   48 (221)
T ss_dssp             CCCCTTHHHHHTTC--SSSSSCCCC-----CCCCCCCCTTC------------------------------CCHHHHHHH
T ss_pred             CCCHHHHHHHHCCC--HHHHHHHHHHHHHCCCCCCCCCCCC------------------------------CCCCCCCCC
T ss_conf             98729999998589--9999999999986799753678999------------------------------954634334


Q ss_pred             HCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCC------CCCCCCCCCHHHHHHHCCC
Q ss_conf             6163067899887612998766757412599999999826999999999789999------8557999939999998299
Q 001410          638 IIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGP------CILDDEGQGVLHLAASLGY  711 (1082)
Q Consensus       638 ~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadi------n~~d~~G~TpLHlAa~~G~  711 (1082)
                      .+.  .+++++|++.+++.+..+..+.   ++++.+...+...+++.++..+...      ......|.||||.|+..++
T Consensus        49 ~~~--~~iv~~L~~~g~d~~~~d~~g~---t~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~  123 (221)
T d1iknd_          49 TNQ--PEIAEALLGAGCDPELRDFRGN---TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGY  123 (221)
T ss_dssp             TTC--HHHHHCCCSCCCCSCCCCTTCC---CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTC
T ss_pred             CCC--CCCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
T ss_conf             332--2233332222222222322322---22222333222221110111013233322222223343213567755598


Q ss_pred             HHHHHHHHHCCCCCCCCC-CCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHH
Q ss_conf             888999986799953038-9999777899982999999999974999998889999999999899999974979999999
Q 001410          712 DWAIKPTVTAGVSINFRD-LSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFL  790 (1082)
Q Consensus       712 ~~iv~~LL~~Gadin~~D-~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~L  790 (1082)
                      ...+.+|+..|+.++..+ .+|+||||+|+..|+.+++++|+++|+++++      +|..|.||||+|+..++.+++++|
T Consensus       124 ~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~------~~~~G~tpl~~A~~~~~~~~~~~l  197 (221)
T d1iknd_         124 LGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR------VTYQGYSPYQLTWGRPSTRIQQQL  197 (221)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCC------CCTTCCCGGGGCTTSSCHHHHHHH
T ss_pred             HHHEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHH
T ss_conf             22301001368631122446777843111122248988889863886456------699998999999987889999999


Q ss_pred             HHCCCC
Q ss_conf             983897
Q 001410          791 AESSLT  796 (1082)
Q Consensus       791 le~g~~  796 (1082)
                      ++.+..
T Consensus       198 ~~~~~~  203 (221)
T d1iknd_         198 GQLTLE  203 (221)
T ss_dssp             HTTSCG
T ss_pred             HHCCCC
T ss_conf             982873

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=1.2e-22  Score=166.17  Aligned_cols=216  Identities=16%  Similarity=0.043  Sum_probs=146.0

Q ss_pred             CCCHHHCCCCCHHHHHHHH----CCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHH
Q ss_conf             4425340499178999998----799865689999997169999956996454355420028899975557889980366
Q 001410          529 KCKWSCMFAEVEVPAEVLA----DGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSES  604 (1082)
Q Consensus       529 ~~~~ac~fG~veVv~~LLq----~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L  604 (1082)
                      ++++||..|+.+++..|+.    .|+.  ...++..|.||||+|+.+++  .++++  +++..+++.+.....+      
T Consensus         6 pLh~A~~~g~~~~v~~Ll~~~~~~g~~--in~~d~~g~TpL~~A~~~~~--~~iv~--~Ll~~ga~~~~~~~~~------   73 (228)
T d1k1aa_           6 PLHIAVVQGNLPAVHRLVNLFQQGGRE--LDIYNNLRQTPLHLAVITTL--PSVVR--LLVTAGASPMALDRHG------   73 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHTTCC--SCCCCTTSCCHHHHHHHTTC--HHHHH--HHHHTTCCTTCCCTTS------
T ss_pred             HHHHHHHCCCHHHHHHHHHHHHHCCCC--CCCCCCCCCCCCEEHHCCCC--CCCCC--CCCCCCCCCCCCCCCC------
T ss_conf             999999839999999999989977997--77668999962410001355--33333--3322222334333322------


Q ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCC-CCCHHHHHHHHHHHHCHHHHHH
Q ss_conf             798999999980999987776360209999999616306789988761299876675-7412599999999826999999
Q 001410          605 FLHLRLERILSMRSSPQNHLSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQ-HVEKYQILQKIMKEKLYSWLLR  683 (1082)
Q Consensus       605 ~l~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~-~~~~~~~l~~~a~~~~~~~lv~  683 (1082)
                                              ....+.+......  +.+..+............ .......+++............
T Consensus        74 ------------------------~~~~~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  127 (228)
T d1k1aa_          74 ------------------------QTAAHLACEHRSP--TCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQ  127 (228)
T ss_dssp             ------------------------CCHHHHHHHTTCH--HHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHH
T ss_pred             ------------------------CCCCCCCCCCCCC--CCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             ------------------------2333222223452--10023442045432232233332222222222222100134


Q ss_pred             HHHHCCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC
Q ss_conf             9997899998-557999939999998299888999986799953038999977789998299999999997499999888
Q 001410          684 KVCEDGKGPC-ILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLT  762 (1082)
Q Consensus       684 ~Ll~~Gadin-~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~t  762 (1082)
                      .|.....+.. .....|.++|+.|+..+...+++.++..|.+++.+|..|.||||+|+..|+.+++++|+++||+++.  
T Consensus       128 ~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~--  205 (228)
T d1k1aa_         128 LLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL--  205 (228)
T ss_dssp             HHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC--
T ss_pred             HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC--
T ss_conf             430012332222100025578898875100234432220223222123686168999985879999999987899988--


Q ss_pred             CCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             99999999998999999749799999
Q 001410          763 DPSPEFPLSRTPSDLASSNGHKGISG  788 (1082)
Q Consensus       763 dp~~~D~~G~TPLhlAa~~Gh~eiv~  788 (1082)
                          +|..|.||||+|+.+|+.++++
T Consensus       206 ----~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         206 ----KNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             ----CCTTSCCTTTTCSSHHHHHHHT
T ss_pred             ----CCCCCCCHHHHHHHCCCCCCCC
T ss_conf             ----7899999999998687703538

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.90  E-value=7.6e-23  Score=167.40  Aligned_cols=239  Identities=16%  Similarity=0.079  Sum_probs=137.1

Q ss_pred             HHHHHHHH-CCCCCCCEEEEEECCCCCCCCCCCC-CCCCCCCHHHHH-----H--------HHHHHHHHCCCCCCCCCCC
Q ss_conf             16999995-6996454355420028899975557-889980366798-----9--------9999998099998777636
Q 001410          563 VPFYITCS-NRLACSEVREFDYIVGSVKDADISD-IYGSSTSESFLH-----L--------RLERILSMRSSPQNHLSEG  627 (1082)
Q Consensus       563 tPL~vA~~-ng~~csevv~feyl~~~~a~in~~d-~~g~~~t~L~l~-----~--------rivkLLl~~g~~~~~~~~~  627 (1082)
                      ||||+++. .+.  .++++  .+...+  +|..+ .+|  .|+||+.     .        ...+.++..|++.+..+..
T Consensus         2 ~p~~~~~~~~~~--~~~~~--~l~~~~--~n~~~~~~g--~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~   73 (277)
T d2fo1e1           2 SPIKLHTEAAGS--YAITE--PITRES--VNIIDPRHN--RTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCD   73 (277)
T ss_dssp             CCCHHHHHHHSS--SCCCS--CCSTTT--TTTCCCSSC--CCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTT
T ss_pred             CHHHHHHHHCCC--HHHHH--HHHHCC--CCCCCCCCC--CCHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCCCCCC
T ss_conf             869999981798--88999--998669--986779999--6699999986899999999965236798769976454788


Q ss_pred             CCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCC---CCCCCCCCCCCCHHH
Q ss_conf             02099999996163067899887612998766757412599999999826999999999789---999855799993999
Q 001410          628 LCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDG---KGPCILDDEGQGVLH  704 (1082)
Q Consensus       628 g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~G---adin~~d~~G~TpLH  704 (1082)
                      |.+++|+|+..++.  +.+++|+++|++++..+..+.   ++++.+...++..+...+...+   ..++..+..+.++.+
T Consensus        74 G~TpLh~A~~~g~~--~iv~~Ll~~Gad~n~~~~~g~---t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  148 (277)
T d2fo1e1          74 ENTPLMLAVLARRR--RLVAYLMKAGADPTIYNKSER---SALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALM  148 (277)
T ss_dssp             SCCHHHHHHHHTCH--HHHHHHHHTTCCSCCCCTTCC---CHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHH
T ss_pred             CCEEECCCCCCCCC--CCCCCCCCCCCCCCCCCCCCC---CCCCCHHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf             88510034333333--333333223222332222222---2221001100001234443114542222222221103678


Q ss_pred             HHHHCCCHH---HHHHHHHCC--------CCCCCCCCCCCCHHHHHHHCCCHHHHHHHH-HCCCCCCCCCCCCCCCCCCC
Q ss_conf             999829988---899998679--------995303899997778999829999999999-74999998889999999999
Q 001410          705 LAASLGYDW---AIKPTVTAG--------VSINFRDLSGWTALHWAAYCGREKTVAVLL-SLGAAPGLLTDPSPEFPLSR  772 (1082)
Q Consensus       705 lAa~~G~~~---iv~~LL~~G--------adin~~D~~G~TpLH~AA~~G~~eiV~~LL-~~GAdvna~tdp~~~D~~G~  772 (1082)
                      .+...+...   .+..+....        ...+..+..|+||||+++..++.+++..++ ..+.+.+.      +|..|.
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~------~d~~g~  222 (277)
T d2fo1e1         149 IVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK------QDEDGK  222 (277)
T ss_dssp             HHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC------CCTTCC
T ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCC
T ss_conf             88750343322222100112332222223455544668987000012233322222322234543334------689999


Q ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             89999997497999999998389743445755889899699988999999999
Q 001410          773 TPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVS  825 (1082)
Q Consensus       773 TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~~~v~~Ll  825 (1082)
                      ||||+|+..|+.+++++|++.|+     +++.+|..|.||+++|...+...++
T Consensus       223 tpL~~A~~~g~~~iv~~Ll~~ga-----din~~d~~G~T~L~~A~~~~~~~iv  270 (277)
T d2fo1e1         223 TPIMLAAQEGRIEVVMYLIQQGA-----SVEAVDATDHTARQLAQANNHHNIV  270 (277)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTC-----CSSCCCSSSCCHHHHHHHTTCHHHH
T ss_pred             CHHHHHHHCCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHCCCHHHH
T ss_conf             89999998598999999998769-----9988699999999999985989999

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.87  E-value=7.6e-21  Score=153.93  Aligned_cols=204  Identities=18%  Similarity=0.156  Sum_probs=165.1

Q ss_pred             HHHHHHHHHCCCCCCC-CCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHH
Q ss_conf             9999999809999877-763602099999996163067899887612998766757412599999999826999999999
Q 001410          608 LRLERILSMRSSPQNH-LSEGLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVC  686 (1082)
Q Consensus       608 ~rivkLLl~~g~~~~~-~~~~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll  686 (1082)
                      .+++++|+..|++.+. .+..|.+++|+|+..++.  +.++.|+..+++++..+..+.  ..+...+..... .......
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~--e~v~~Ll~~g~~~n~~~~~~~--~~~~~~~~~~~~-~~~~~~~   76 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARA--DAAKRLLDAGADANSQDNTGR--TPLHAAVAADAM-GVFQILL   76 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCH--HHHHHHHHTTCCTTCCCTTSC--CHHHHHHHTTCH-HHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCH--HHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCCC-CCCCCCC
T ss_conf             89999999878986867699998899999983999--999998750223322222222--222222222222-2222222


Q ss_pred             HCC-CCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             789-9998557999939999998299888999986799953038999977789998299999999997499999888999
Q 001410          687 EDG-KGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPS  765 (1082)
Q Consensus       687 ~~G-adin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~  765 (1082)
                      ... .........|.++.+.+.........+.|+..+++++.++..|+|||++++..|..+++..|+..+++++.     
T Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~-----  151 (209)
T d1ot8a_          77 RNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDA-----  151 (209)
T ss_dssp             TCTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC-----
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCC-----
T ss_conf             222222322222233322222222101235555310146555577999823000036863145320122223454-----


Q ss_pred             CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99999998999999749799999999838974344575588989969998899999999982
Q 001410          766 PEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEK  827 (1082)
Q Consensus       766 ~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~~~v~~Lle~  827 (1082)
                       +|..|.||||+|+..|+.+++++|++.|++     ++.+|..|.||+++|...+...+++.
T Consensus       152 -~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad-----~n~~d~~g~Tpl~~A~~~~~~~iv~l  207 (209)
T d1ot8a_         152 -QDDKDETPLFLAAREGSYEASKALLDNFAN-----REITDHMDRLPRDVASERLHHDIVRL  207 (209)
T ss_dssp             -CCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             -CCCCCCCCCCHHCCCCHHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHH
T ss_conf             -434445521121032499999999987999-----98868999999999998687989964

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2e-21  Score=157.78  Aligned_cols=190  Identities=16%  Similarity=0.056  Sum_probs=107.8

Q ss_pred             CCCCHHHHHHHHCCCC--HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHH
Q ss_conf             6020999999961630--67899887612998766757412599999999826999999999789999855799993999
Q 001410          627 GLCEKQKLISKIIQLK--EEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLH  704 (1082)
Q Consensus       627 ~g~t~lh~a~~~~~l~--~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLH  704 (1082)
                      +|.+++|+|+..+...  .+.++++...++++|..+..|.   ++++.+...+...++++|++.|++++..|..|.||||
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~---TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~t~l~   77 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ---TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLH   77 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCC---CHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHHH
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9872999999858999999999999867997536789999---5463433433222333322222222223223222222


Q ss_pred             HHHHCCCHHHHHHHHHCCCC------CCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             99982998889999867999------530389999777899982999999999974999998889999999999899999
Q 001410          705 LAASLGYDWAIKPTVTAGVS------INFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA  778 (1082)
Q Consensus       705 lAa~~G~~~iv~~LL~~Gad------in~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlA  778 (1082)
                      +++..|+..+++.|+..+..      .+.....|.||||+|+..|+.+++.+|+..|+.++..++     ..|.||||+|
T Consensus        78 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~-----~~G~T~L~~A  152 (221)
T d1iknd_          78 LACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEP-----CNGRTALHLA  152 (221)
T ss_dssp             HHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCT-----TTCCCHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHEEEECCCCCCCCCCCC-----CCCCCCCCCC
T ss_conf             23332222211101110132333222222233432135677555982230100136863112244-----6777843111


Q ss_pred             HHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHHHHHHCC
Q ss_conf             974979999999983897434457558898996999889----999999998227
Q 001410          779 SSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQTVSEKTA  829 (1082)
Q Consensus       779 a~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa----~~~v~~Lle~~a  829 (1082)
                      +..|+.+++++|++.|+     +++.++..|.||++++.    ...++.|.+...
T Consensus       153 ~~~g~~~~v~~Ll~~ga-----d~~~~~~~G~tpl~~A~~~~~~~~~~~l~~~~~  202 (221)
T d1iknd_         153 VDLQNPDLVSLLLKCGA-----DVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTL  202 (221)
T ss_dssp             HHTTCHHHHHHHHTTTC-----CSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSC
T ss_pred             CCCCCHHHHHHHHHCCC-----CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC
T ss_conf             12224898888986388-----645669999899999998788999999998287

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=4e-21  Score=155.78  Aligned_cols=221  Identities=14%  Similarity=0.093  Sum_probs=168.3

Q ss_pred             CCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             99971699999569964543554200288999755578899803667989999999809999877763602099999996
Q 001410          559 AVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLRLERILSMRSSPQNHLSEGLCEKQKLISKI  638 (1082)
Q Consensus       559 ~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l~~rivkLLl~~g~~~~~~~~~g~t~lh~a~~~  638 (1082)
                      ..|.||||+||..|+  .+++++  +                          ++++...+.+.+..+..|.+++|+|+..
T Consensus         1 ~dG~TpLh~A~~~g~--~~~v~~--L--------------------------l~~~~~~g~~in~~d~~g~TpL~~A~~~   50 (228)
T d1k1aa_           1 EDGDTPLHIAVVQGN--LPAVHR--L--------------------------VNLFQQGGRELDIYNNLRQTPLHLAVIT   50 (228)
T ss_dssp             CTTCCHHHHHHHTTC--HHHHHH--H--------------------------HHHHHHTTCCSCCCCTTSCCHHHHHHHT
T ss_pred             CCCCCHHHHHHHCCC--HHHHHH--H--------------------------HHHHHHCCCCCCCCCCCCCCCCEEHHCC
T ss_conf             988429999998399--999999--9--------------------------9989977997776689999624100013


Q ss_pred             CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCC----CCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             163067899887612998766757412599999999826999999999789----9998557999939999998299888
Q 001410          639 IQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDG----KGPCILDDEGQGVLHLAASLGYDWA  714 (1082)
Q Consensus       639 ~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~G----adin~~d~~G~TpLHlAa~~G~~~i  714 (1082)
                      +..  +++++|++.+++.+.....+.   .....+.......+++.+....    ...+.......++||.+........
T Consensus        51 ~~~--~iv~~Ll~~ga~~~~~~~~~~---~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  125 (228)
T d1k1aa_          51 TLP--SVVRLLVTAGASPMALDRHGQ---TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET  125 (228)
T ss_dssp             TCH--HHHHHHHHTTCCTTCCCTTSC---CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             CCC--CCCCCCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf             553--333333222223343333222---333222223452100234420454322322333322222222222221001


Q ss_pred             HHHHHHCCCCCC-CCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             999986799953-0389999777899982999999999974999998889999999999899999974979999999983
Q 001410          715 IKPTVTAGVSIN-FRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAES  793 (1082)
Q Consensus       715 v~~LL~~Gadin-~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~  793 (1082)
                      ...|.....+.. ..+..|.++|++|+..+...+++.++..|..++.      +|..|.||||+|+..|+.+++++|+++
T Consensus       126 ~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~------~d~~g~t~L~~A~~~g~~~~v~~Ll~~  199 (228)
T d1k1aa_         126 VQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA------QMYSGSSALHSASGRGLLPLVRTLVRS  199 (228)
T ss_dssp             HHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC------BCTTSCBHHHHHHHHTCHHHHHHHHHT
T ss_pred             HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHC
T ss_conf             34430012332222100025578898875100234432220223222------123686168999985879999999987


Q ss_pred             CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             89743445755889899699988999999999
Q 001410          794 SLTSLLLSLKMNDSADDGALEDSIAKAVQTVS  825 (1082)
Q Consensus       794 g~~~~~adln~~d~~g~tal~~aa~~~v~~Ll  825 (1082)
                      |++     ++.+|..|.||+++|.......++
T Consensus       200 Gad-----~n~~d~~G~TpL~~A~~~~~~div  226 (228)
T d1k1aa_         200 GAD-----SSLKNCHNDTPLMVARSRRVIDIL  226 (228)
T ss_dssp             TCC-----TTCCCTTSCCTTTTCSSHHHHHHH
T ss_pred             CCC-----CCCCCCCCCCHHHHHHHCCCCCCC
T ss_conf             899-----988789999999999868770353

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=6.4e-20  Score=147.70  Aligned_cols=151  Identities=19%  Similarity=0.180  Sum_probs=117.9

Q ss_pred             CHHHHHHHHCCCCHHHHHHHHHH-CCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             09999999616306789988761-29987667574125999999998269999999997899998557999939999998
Q 001410          630 EKQKLISKIIQLKEEEESYQMVE-ANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS  708 (1082)
Q Consensus       630 t~lh~a~~~~~l~~e~~~~Ll~~-gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~  708 (1082)
                      +.++.|+..+.+  +.+++|+.. +.+++..+..+.   ++++++.. ++..+++.|++.+.+++..+..|.+||+.++.
T Consensus         4 ~~L~~Aa~~g~~--~~vk~lL~~~~~~~n~~d~~g~---t~L~~A~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~   77 (156)
T d1bd8a_           4 DRLSGAAARGDV--QEVRRLLHRELVHPDALNRFGK---TALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAAR   77 (156)
T ss_dssp             HHHHHHHHHTCH--HHHHHHHHTTCCCTTCCCTTSC---CHHHHSCT-TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             HHHHHHHHCCCH--HHHHHHHHHCCCCCCCCCCCCC---CCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             799999995899--9999999958999886489998---41334322-22222222222222222222222222222222


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             29988899998679995303899997778999829999999999749999988899999999998999999749799999
Q 001410          709 LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISG  788 (1082)
Q Consensus       709 ~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~  788 (1082)
                      .++..+++.+++.|++++.+|..|+||||+||..|+.+++++|+ .|++++.      +|..|.||||+|+..|+.++++
T Consensus        78 ~~~~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~------~d~~G~TpL~~A~~~g~~~iv~  150 (156)
T d1bd8a_          78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHR------RDARGLTPLELALQRGAQDLVD  150 (156)
T ss_dssp             TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTC------CCTTSCCHHHHHHHSCCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCC-CCCCCCC------CCCCCCCHHHHHHHCCCHHHHH
T ss_conf             22222222222221221123677872221222233222211112-2256646------6899999999999859899999


Q ss_pred             HHHHC
Q ss_conf             99983
Q 001410          789 FLAES  793 (1082)
Q Consensus       789 ~Lle~  793 (1082)
                      +|+++
T Consensus       151 ~Ll~h  155 (156)
T d1bd8a_         151 ILQGH  155 (156)
T ss_dssp             HHHTT
T ss_pred             HHHHH
T ss_conf             99966

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.84  E-value=7.3e-20  Score=147.30  Aligned_cols=153  Identities=20%  Similarity=0.197  Sum_probs=113.8

Q ss_pred             CHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             09999999616306789988761299876675741259999999982699999999978999985579999399999982
Q 001410          630 EKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASL  709 (1082)
Q Consensus       630 t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~  709 (1082)
                      +++|.|+..+++  +.++.|+++|++++..+..+.   ++++++. .++..++++|++.|++++..+..|.++|+.++..
T Consensus         3 ~~Lh~Aa~~g~~--~~v~~Ll~~g~d~n~~d~~g~---TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~   76 (156)
T d1ihba_           3 NELASAAARGDL--EQLTSLLQNNVNVNAQNGFGR---TALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARA   76 (156)
T ss_dssp             HHHHHHHHHTCH--HHHHHHTTSCCCTTCCCTTSC---CHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHHHHCCCH--HHHHHHHHCCCCCCCCCCCCC---CCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             899999986799--999999987879674677445---3212222-2222222222222222212123575322233222


Q ss_pred             CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCC-CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             99888999986799953038999977789998299999999997499-99988899999999998999999749799999
Q 001410          710 GYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGA-APGLLTDPSPEFPLSRTPSDLASSNGHKGISG  788 (1082)
Q Consensus       710 G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GA-dvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~  788 (1082)
                      ++...+..|+..+.+++..|..|.+|||+|+..++.+++++|+.+|+ +++.      +|..|.||||+|+..|+.++++
T Consensus        77 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~------~d~~g~TpL~~A~~~~~~~iv~  150 (156)
T d1ihba_          77 GFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH------RNHKGDTACDLARLYGRNEVVS  150 (156)
T ss_dssp             TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC------CCTTSCCHHHHHHHTTCHHHHH
T ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHH
T ss_conf             2222222221122222235644321122333322122222222122011224------5899989999999839899999


Q ss_pred             HHHHCC
Q ss_conf             999838
Q 001410          789 FLAESS  794 (1082)
Q Consensus       789 ~Lle~g  794 (1082)
                      +|+++|
T Consensus       151 ~Ll~~G  156 (156)
T d1ihba_         151 LMQANG  156 (156)
T ss_dssp             HHHHTC
T ss_pred             HHHHCC
T ss_conf             999667

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=4.8e-19  Score=141.80  Aligned_cols=150  Identities=20%  Similarity=0.195  Sum_probs=118.9

Q ss_pred             CCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             20999999961630678998876129987667574125999999998269999999997899998557999939999998
Q 001410          629 CEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAAS  708 (1082)
Q Consensus       629 ~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~  708 (1082)
                      .++|+.|++.++.  +.++.|++++++.+ .+..|   .++++.+.......++..++.........+..+.++++.++.
T Consensus         3 ~t~L~~Aa~~g~~--~~v~~LL~~ga~~~-~~~~g---~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (153)
T d1awcb_           3 GKKLLEAARAGQD--DEVRILMANGAPFT-TDWLG---TSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAAS   76 (153)
T ss_dssp             HHHHHHHHHHTCH--HHHHHHHHHTCCCC-CCTTC---CCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHH
T ss_pred             CHHHHHHHHCCCH--HHHHHHHHCCCCCC-CCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             9799999987899--99999998699834-24478---753334323222222222222222222122223332322223


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHH
Q ss_conf             29988899998679995303899997778999829999999999749999988899999999998999999749799999
Q 001410          709 LGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISG  788 (1082)
Q Consensus       709 ~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~  788 (1082)
                      ..+...++.++..|++++.+|..|+||||+||..|+.++|++|++.|++++.      +|..|.||||+|+.+|+.++++
T Consensus        77 ~~~~~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~------~d~~g~Tpl~~A~~~g~~eiv~  150 (153)
T d1awcb_          77 EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT------QSKFCKTAFDISIDNGNEDLAE  150 (153)
T ss_dssp             HTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHH
T ss_pred             CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHEEEECCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHH
T ss_conf             3110122122246876123224673477766430222412311434467726------6898999999999859999998


Q ss_pred             HH
Q ss_conf             99
Q 001410          789 FL  790 (1082)
Q Consensus       789 ~L  790 (1082)
                      +|
T Consensus       151 lL  152 (153)
T d1awcb_         151 IL  152 (153)
T ss_dssp             HH
T ss_pred             HC
T ss_conf             67

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=4.2e-19  Score=142.19  Aligned_cols=150  Identities=18%  Similarity=0.188  Sum_probs=133.2

Q ss_pred             HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             99999998269999999997899998557999939999998299888999986799953038999977789998299999
Q 001410          668 ILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT  747 (1082)
Q Consensus       668 ~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~ei  747 (1082)
                      .+++.|+..+...+++.|++.|++++.+|..|.||||+|+ .|+.+++++|+..|++++.++..|.++|++++..++.++
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~~   81 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDT   81 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             8999999867999999999878796746774453212222-222222222222222221212357532223322222222


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH----HHHHHH
Q ss_conf             9999974999998889999999999899999974979999999983897434457558898996999889----999999
Q 001410          748 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI----AKAVQT  823 (1082)
Q Consensus       748 V~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa----~~~v~~  823 (1082)
                      +..|+..+.+++.      .|..|.+|+++|+..|+.+++++|++++.    .+.+.++..|.||++++.    .++++.
T Consensus        82 ~~~l~~~~~~~~~------~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~----~~~~~~d~~g~TpL~~A~~~~~~~iv~~  151 (156)
T d1ihba_          82 LQTLLEFQADVNI------EDNEGNLPLHLAAKEGHLRVVEFLVKHTA----SNVGHRNHKGDTACDLARLYGRNEVVSL  151 (156)
T ss_dssp             HHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHSC----CCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             CCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCCCCCCCHHHHHHHCCCHHHHHH
T ss_conf             2222112222223------56443211223333221222222221220----1122458999899999998398999999


Q ss_pred             HHHHC
Q ss_conf             99822
Q 001410          824 VSEKT  828 (1082)
Q Consensus       824 Lle~~  828 (1082)
                      |++.|
T Consensus       152 Ll~~G  156 (156)
T d1ihba_         152 MQANG  156 (156)
T ss_dssp             HHHTC
T ss_pred             HHHCC
T ss_conf             99667

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=3.3e-20  Score=149.63  Aligned_cols=122  Identities=29%  Similarity=0.297  Sum_probs=108.9

Q ss_pred             HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             99999998269999999997899998557999939999998299888999986799953038999977789998299999
Q 001410          668 ILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT  747 (1082)
Q Consensus       668 ~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~ei  747 (1082)
                      .+++.+...++..+++.|++.|++++.+|..|+||||+|+..|+.+++++|++.|++++.+|.+|+||||+|+.+|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf             99999999399999999998699756100211111122222222222222222222222212367642223210268899


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHH--HHCCCHHHHHHHHHCC
Q ss_conf             9999974999998889999999999899999--9749799999999838
Q 001410          748 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLA--SSNGHKGISGFLAESS  794 (1082)
Q Consensus       748 V~~LL~~GAdvna~tdp~~~D~~G~TPLhlA--a~~Gh~eiv~~Lle~g  794 (1082)
                      |++|+++||+++..+.     ..|.||++++  ...||.+++++|++.+
T Consensus        83 v~~Ll~~ga~v~~~~~-----~~~~~~~~~~~a~~~g~~eiv~~L~~~~  126 (130)
T d1ycsb1          83 CKFLVESGAAVFAMTY-----SDMQTAADKCEEMEEGYTQCSQFLYGVQ  126 (130)
T ss_dssp             HHHHHHTTCCTTCCCS-----SSCCCHHHHCCSSSTTCCCHHHHHHHHH
T ss_pred             HHHHHHCCCCCCCCCC-----CCCCCHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf             9999986998664668-----9998899999999868299999998678

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.82  E-value=4.9e-23  Score=168.66  Aligned_cols=128  Identities=14%  Similarity=0.063  Sum_probs=70.5

Q ss_pred             HHHHHHHHHHHCHHHHHH---HHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCC--CCCCCHHHHHH
Q ss_conf             599999999826999999---9997899998557999939999998299888999986799953038--99997778999
Q 001410          666 YQILQKIMKEKLYSWLLR---KVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRD--LSGWTALHWAA  740 (1082)
Q Consensus       666 ~~~l~~~a~~~~~~~lv~---~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D--~~G~TpLH~AA  740 (1082)
                      +.++++.++..|+..+++   .|+..|++++.++..|.||||+||..|+.++|++|++.|++++..+  ..|+||||+||
T Consensus        90 ~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa  169 (346)
T d2ajaa1          90 SEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAA  169 (346)
T ss_dssp             HHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHH
T ss_conf             88499999985998899999999838985533689999799999987899999999986997021455569987438998


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             82999999999974999998889999999999899999974979999999983897
Q 001410          741 YCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  796 (1082)
Q Consensus       741 ~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~  796 (1082)
                      ..||.++|++|++.|+++...+.   .+..+.||++.|+.+||.+++++|++.|++
T Consensus       170 ~~g~~~iv~~Ll~~~~~~~~~~~---~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~  222 (346)
T d2ajaa1         170 ENGHLHVLNRLCELAPTEATAMI---QAENYYAFRWAAVGRGHHNVINFLLDCPVM  222 (346)
T ss_dssp             HTTCHHHHHHHHHSCGGGHHHHH---HHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred             HHHHHHHHHHHHHCCCCCCCCCC---CCCCCCCHHHHHHHCCHHHHHHHHHHCCCC
T ss_conf             87567999999976994201200---168996311577624889999999968998

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.82  E-value=1.9e-18  Score=137.80  Aligned_cols=146  Identities=24%  Similarity=0.242  Sum_probs=124.4

Q ss_pred             HHHHHHHHHHCHHHHHHHHHH-CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Q ss_conf             999999998269999999997-8999985579999399999982998889999867999530389999777899982999
Q 001410          667 QILQKIMKEKLYSWLLRKVCE-DGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGRE  745 (1082)
Q Consensus       667 ~~l~~~a~~~~~~~lv~~Ll~-~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~  745 (1082)
                      .+++.++.. +...+++.|+. .+++++..|..|.||||+|+ .|+.++++.|+..+++++..+..|.+||+.++..++.
T Consensus         4 ~~L~~Aa~~-g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~   81 (156)
T d1bd8a_           4 DRLSGAAAR-GDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFL   81 (156)
T ss_dssp             HHHHHHHHH-TCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             HHHHHHHHC-CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             799999995-89999999999589998864899984133432-2222222222222222222222222222222222222


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH----HHH
Q ss_conf             9999999749999988899999999998999999749799999999838974344575588989969998899----999
Q 001410          746 KTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA----KAV  821 (1082)
Q Consensus       746 eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~----~~v  821 (1082)
                      ++++.+++.|++++.      +|..|.||||+|+..|+.+++++|+ .|     ++++.++..|.||+++|..    +++
T Consensus        82 ~~~~~~l~~~~~~n~------~~~~~~t~L~~A~~~~~~~i~~~L~-~~-----~~~~~~d~~G~TpL~~A~~~g~~~iv  149 (156)
T d1bd8a_          82 DTLKVLVEHGADVNV------PDGTGALPIHLAVQEGHTAVVSFLA-AE-----SDLHRRDARGLTPLELALQRGAQDLV  149 (156)
T ss_dssp             HHHHHHHHTTCCSCC------CCTTSCCHHHHHHHHTCHHHHHHHH-TT-----SCTTCCCTTSCCHHHHHHHSCCHHHH
T ss_pred             CCCCCCCCCCCCCCC------CCCCCCEEECCCCCCCCCCCCCCCC-CC-----CCCCCCCCCCCCHHHHHHHCCCHHHH
T ss_conf             222222222122112------3677872221222233222211112-22-----56646689999999999985989999


Q ss_pred             HHHHH
Q ss_conf             99998
Q 001410          822 QTVSE  826 (1082)
Q Consensus       822 ~~Lle  826 (1082)
                      +.|++
T Consensus       150 ~~Ll~  154 (156)
T d1bd8a_         150 DILQG  154 (156)
T ss_dssp             HHHHT
T ss_pred             HHHHH
T ss_conf             99996

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=7.2e-19  Score=140.62  Aligned_cols=121  Identities=20%  Similarity=0.166  Sum_probs=101.9

Q ss_pred             HHHHHHHHCHHHHHHHHHHCCCCCCCC------CCCCCCHHHHHHHC---CCHHHHHHHHHCCCCCCCCCCCCCCHHHHH
Q ss_conf             999999826999999999789999855------79999399999982---998889999867999530389999777899
Q 001410          669 LQKIMKEKLYSWLLRKVCEDGKGPCIL------DDEGQGVLHLAASL---GYDWAIKPTVTAGVSINFRDLSGWTALHWA  739 (1082)
Q Consensus       669 l~~~a~~~~~~~lv~~Ll~~Gadin~~------d~~G~TpLHlAa~~---G~~~iv~~LL~~Gadin~~D~~G~TpLH~A  739 (1082)
                      +..+++.+.... +..++..|.+++..      +..|+||||+|+..   |+.+++++|+++|+++|.+|..|+||||+|
T Consensus        10 L~~Av~~~dl~~-l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A   88 (154)
T d1dcqa1          10 LCEAVKTRDIFG-LLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC   88 (154)
T ss_dssp             HHHHHHTTCHHH-HHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHH
T ss_pred             HHHHHHHCCHHH-HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCC
T ss_conf             999999588999-9999986998677777545789998269999983289989999999974997333131210100011


Q ss_pred             HHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Q ss_conf             982999999999974999998889999999999899999974979999999983897
Q 001410          740 AYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLT  796 (1082)
Q Consensus       740 A~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~  796 (1082)
                      |..|+.+++++|+++|++++.      +|..|.||||+|+..|+.+++++|++.+..
T Consensus        89 ~~~~~~~~v~~Ll~~gad~~~------~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~  139 (154)
T d1dcqa1          89 CLTDNAECLKLLLRGKASIEI------ANESGETPLDIAKRLKHEHCEELLTQALSG  139 (154)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHHCCC
T ss_conf             112333322122135755024------478999999999993999999999993889

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=7.2e-20  Score=147.34  Aligned_cols=119  Identities=22%  Similarity=0.233  Sum_probs=105.5

Q ss_pred             HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHCCCHH
Q ss_conf             999999982699999999978999985579999399999982998889999867999530389999-7778999829999
Q 001410          668 ILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGW-TALHWAAYCGREK  746 (1082)
Q Consensus       668 ~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~-TpLH~AA~~G~~e  746 (1082)
                      .+++.+...++..+++.|++.|++++.++..|.||||+|+ .|+.+++++|+++|++++.++..|. ||||+||..|+.+
T Consensus         5 ~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~~~   83 (125)
T d1bi7b_           5 DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD   83 (125)
T ss_dssp             THHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf             5999999877999999999859741332221222222222-222222221222222222222222222222222322222


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             99999974999998889999999999899999974979999999983
Q 001410          747 TVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAES  793 (1082)
Q Consensus       747 iV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~  793 (1082)
                      ++++|+++|++++.      +|..|+||||+|+.+|+.+++++|+..
T Consensus        84 ~v~~Ll~~ga~~~~------~d~~G~T~l~~A~~~g~~~~v~~Llsa  124 (125)
T d1bi7b_          84 TLVVLHRAGARLDV------RDAWGRLPVDLAEELGHRDVARYLRAA  124 (125)
T ss_dssp             HHHHHHHHTCCSSC------CCTTCCCHHHHHHHHTCHHHHHHHSSC
T ss_pred             CCCCCCCCCCCCCC------CCCCCCCHHHHHHHCCCHHHHHHHHHC
T ss_conf             22222122222332------457898999999986879999999956

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.80  E-value=1.9e-21  Score=157.95  Aligned_cols=164  Identities=10%  Similarity=-0.079  Sum_probs=85.0

Q ss_pred             CCCCHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCCC-------CCC
Q ss_conf             6020999999961630678998876129987667574125999999998269999999997899998557-------999
Q 001410          627 GLCEKQKLISKIIQLKEEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCEDGKGPCILD-------DEG  699 (1082)
Q Consensus       627 ~g~t~lh~a~~~~~l~~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~~Gadin~~d-------~~G  699 (1082)
                      .|.+++|+|+..+++  +++++|++.+++....+.....++++++.+...++..++++|++.|++++..+       ..+
T Consensus       160 ~g~t~L~~Aa~~g~~--~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~  237 (346)
T d2ajaa1         160 ENYHAFRLAAENGHL--HVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKY  237 (346)
T ss_dssp             HHHHHHHHHHHTTCH--HHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTT
T ss_pred             CCCCHHHHHHHHHHH--HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHH
T ss_conf             998743899887567--999999976994201200168996311577624889999999968998663779998759476


Q ss_pred             CCHHHHHHHCCCHHHHHHHHHCCC--CCCCCCC-------CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             939999998299888999986799--9530389-------9997778999829999999999749999988899999999
Q 001410          700 QGVLHLAASLGYDWAIKPTVTAGV--SINFRDL-------SGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPL  770 (1082)
Q Consensus       700 ~TpLHlAa~~G~~~iv~~LL~~Ga--din~~D~-------~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~  770 (1082)
                      .++++.++..+.......+.....  ..+..+.       .+.++|+.|+..|+.+++++|+..++....... ...+.+
T Consensus       238 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~-~~~~~~  316 (346)
T d2ajaa1         238 VNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPT-ATIPGD  316 (346)
T ss_dssp             HHHHHHHHHHHHHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSC-CSSTTC
T ss_pred             HHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCC-CCCCCC
T ss_conf             6688997630443789999973626567677333323562442299998617959999999868675553644-567999


Q ss_pred             CCCHHHHHHHCCCHHHHHHHHHC
Q ss_conf             99899999974979999999983
Q 001410          771 SRTPSDLASSNGHKGISGFLAES  793 (1082)
Q Consensus       771 G~TPLhlAa~~Gh~eiv~~Lle~  793 (1082)
                      |.||||+|+..||.+++++|++.
T Consensus       317 g~T~LhlA~~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         317 ANELLRLALRLGNQGACALLLSI  339 (346)
T ss_dssp             CCHHHHHHHHHTCTTHHHHHTTS
T ss_pred             CCCHHHHHHHCCCHHHHHHHHCC
T ss_conf             98199999984819999998589

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.80  E-value=4e-19  Score=142.36  Aligned_cols=184  Identities=16%  Similarity=0.110  Sum_probs=98.6

Q ss_pred             CCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             42534049917899999879986568999999716999995699645435542002889997555788998036679899
Q 001410          530 CKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSEVREFDYIVGSVKDADISDIYGSSTSESFLHLR  609 (1082)
Q Consensus       530 ~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~csevv~feyl~~~~a~in~~d~~g~~~t~L~l~~r  609 (1082)
                      ++|||..|+++++..||+.|++  ....+..|.||||.||..++. .+...|+                          .
T Consensus       111 LH~Aa~~g~~~~v~~Ll~~gad--~~~~d~~G~TpL~~A~~~~~~-~~~~~~~--------------------------~  161 (301)
T d1sw6a_         111 LHWLTSIANLELVKHLVKHGSN--RLYGDNMGESCLVKAVKSVNN-YDSGTFE--------------------------A  161 (301)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCC--TTBCCTTCCCHHHHHHHSSHH-HHTTCHH--------------------------H
T ss_pred             HHHHHHCCCHHHHHHHHHCCCC--CCCCCCCCCCHHHHHHHCCCC-HHHHHHH--------------------------H
T ss_conf             9999986799999999987899--776776435177774220220-2466699--------------------------9


Q ss_pred             HHHHHHHCCCCCCCCCCCCCCHHHHHHHHCCCC--HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHH
Q ss_conf             999998099998777636020999999961630--678998876129987667574125999999998269999999997
Q 001410          610 LERILSMRSSPQNHLSEGLCEKQKLISKIIQLK--EEEESYQMVEANPEKNLSQHVEKYQILQKIMKEKLYSWLLRKVCE  687 (1082)
Q Consensus       610 ivkLLl~~g~~~~~~~~~g~t~lh~a~~~~~l~--~e~~~~Ll~~gad~n~~s~~~~~~~~l~~~a~~~~~~~lv~~Ll~  687 (1082)
                      ++++|...   ....+..|.+++|.+.......  ....++.                            ...++..+..
T Consensus       162 ll~~l~~~---~~~~d~~g~t~lh~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~l~~  210 (301)
T d1sw6a_         162 LLDYLYPC---LILEDSMNRTILHHIIITSGMTGCSAAAKYY----------------------------LDILMGWIVK  210 (301)
T ss_dssp             HHHHHGGG---GGEECTTCCCHHHHHHHHHTSTTCHHHHHHH----------------------------HHHHHHHHHH
T ss_pred             HHHHHHHH---HHHCCCCCCCHHHHHHHHHCCCCCHHHHHHH----------------------------HHHHHHHHHH
T ss_conf             99997645---5513453277879999983755418999998----------------------------9999999986


Q ss_pred             CCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHH-HH--CCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCC
Q ss_conf             8999-985579999399999982998889999-86--7999530389999777899982999999999974999998889
Q 001410          688 DGKG-PCILDDEGQGVLHLAASLGYDWAIKPT-VT--AGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTD  763 (1082)
Q Consensus       688 ~Gad-in~~d~~G~TpLHlAa~~G~~~iv~~L-L~--~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~td  763 (1082)
                      .+.. .......+.++++.+........+..+ +.  .+..+|.+|..|+||||+||..|+.++|++||++||++++   
T Consensus       211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~---  287 (301)
T d1sw6a_         211 KQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFI---  287 (301)
T ss_dssp             GGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTC---
T ss_pred             CCCCCHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCC---
T ss_conf             58720000245664046898860148899998667788607668789998899999986879999999987999999---


Q ss_pred             CCCCCCCCCCHHHHHH
Q ss_conf             9999999998999999
Q 001410          764 PSPEFPLSRTPSDLAS  779 (1082)
Q Consensus       764 p~~~D~~G~TPLhlAa  779 (1082)
                         +|..|.|||++|+
T Consensus       288 ---~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         288 ---ANKSGLRPVDFGA  300 (301)
T ss_dssp             ---CCTTSCCGGGGTC
T ss_pred             ---CCCCCCCHHHHCC
T ss_conf             ---8999999999737

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.79  E-value=2.4e-20  Score=150.57  Aligned_cols=108  Identities=24%  Similarity=0.181  Sum_probs=84.8

Q ss_pred             CCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             93999999829988899998679995303899997778999829999999999749999988899999999998999999
Q 001410          700 QGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLAS  779 (1082)
Q Consensus       700 ~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa  779 (1082)
                      .|||++|+..|+.++++.|++.|++++.+|..|+||||+|+..|+.+++++|+..|++++.      +|..|+||||+|+
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~------~d~~g~tpLh~A~   76 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA------PDKHHITPLLSAV   76 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTC------CSSSCSCHHHHHH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE------CCCCCCCCHHHHH
T ss_conf             7289999987799999999984201223222222222222222222222223343202331------0123321022332


Q ss_pred             HCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             749799999999838974344575588989969998899
Q 001410          780 SNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIA  818 (1082)
Q Consensus       780 ~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~  818 (1082)
                      ..|+.+++++|++.|+     +++.++..|.||++.+..
T Consensus        77 ~~~~~~~v~~Ll~~Ga-----d~~~~d~~G~t~l~~a~~  110 (118)
T d1myoa_          77 YEGHVSCVKLLLSKGA-----DKTVKGPDGLTALEATDN  110 (118)
T ss_dssp             TTTCCHHHHHHHTTCC-----CSSSSSSSTCCCCCTCSS
T ss_pred             HCCCHHHHHHHHCCCC-----CCEEECCCCCCHHHHHHH
T ss_conf             0473243243310200-----000038999999999868

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=7.5e-18  Score=133.75  Aligned_cols=148  Identities=24%  Similarity=0.170  Sum_probs=111.2

Q ss_pred             HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             99999998269999999997899998557999939999998299888999986799953038999977789998299999
Q 001410          668 ILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT  747 (1082)
Q Consensus       668 ~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~ei  747 (1082)
                      ++++.|...+...+++.|++.|++++ .|..|+||||+|+..++..++..++.........+..+.+++++++...+.++
T Consensus         4 t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (153)
T d1awcb_           4 KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANI   82 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
T ss_conf             79999998789999999998699834-24478753334323222222222222222222122223332322223311012


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             99999749999988899999999998999999749799999999838974344575588989969998899999999982
Q 001410          748 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEK  827 (1082)
Q Consensus       748 V~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~~~v~~Lle~  827 (1082)
                      +++|+..|++++.      +|..|.||||+|+..|+.+++++|++.|++     ++.++..|.||++++...+...+++.
T Consensus        83 ~~~l~~~~~~~~~------~~~~g~T~L~~A~~~g~~~iv~~ll~~gad-----~~~~d~~g~Tpl~~A~~~g~~eiv~l  151 (153)
T d1awcb_          83 VEVLLKHGADVNA------KDMLKMTALHWATEHNHQEVVELLIKYGAD-----VHTQSKFCKTAFDISIDNGNEDLAEI  151 (153)
T ss_dssp             HHHHHTTTCCTTC------CCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred             EECCCCCCCCCCC------CCCCCCHHHHHHHHCCHHHEEEECCCCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHH
T ss_conf             2122246876123------224673477766430222412311434467-----72668989999999998599999986

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=1.3e-18  Score=138.96  Aligned_cols=48  Identities=10%  Similarity=0.025  Sum_probs=39.2

Q ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH
Q ss_conf             99999999899999974979999999983897434457558898996999889
Q 001410          765 SPEFPLSRTPSDLASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSI  817 (1082)
Q Consensus       765 ~~~D~~G~TPLhlAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa  817 (1082)
                      +.+|..|+||||+|+..|+.+++++|++.|++     ++++|+.|.||+++|+
T Consensus       253 n~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd-----~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         253 NAQDSNGDTCLNIAARLGNISIVDALLDYGAD-----PFIANKSGLRPVDFGA  300 (301)
T ss_dssp             TCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCC-----TTCCCTTSCCGGGGTC
T ss_pred             CCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHCC
T ss_conf             68789998899999986879999999987999-----9998999999999737

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.77  E-value=7.4e-20  Score=147.28  Aligned_cols=107  Identities=22%  Similarity=0.116  Sum_probs=99.9

Q ss_pred             HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHH
Q ss_conf             99999998269999999997899998557999939999998299888999986799953038999977789998299999
Q 001410          668 ILQKIMKEKLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKT  747 (1082)
Q Consensus       668 ~l~~~a~~~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~ei  747 (1082)
                      +++.+|...++..+++.|++.|++++.++..|+||||+|+..|+.+++++|+..|++++.+|..|+||||+|+.+|+.++
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~~   83 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSC   83 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHCCCHHH
T ss_conf             28999998779999999998420122322222222222222222222222334320233101233210223320473243


Q ss_pred             HHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             999997499999888999999999989999997
Q 001410          748 VAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  780 (1082)
Q Consensus       748 V~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~  780 (1082)
                      +++|+++|++++.      +|..|.||||+|..
T Consensus        84 v~~Ll~~Gad~~~------~d~~G~t~l~~a~~  110 (118)
T d1myoa_          84 VKLLLSKGADKTV------KGPDGLTALEATDN  110 (118)
T ss_dssp             HHHHHTTCCCSSS------SSSSTCCCCCTCSS
T ss_pred             HHHHHCCCCCCEE------ECCCCCCHHHHHHH
T ss_conf             2433102000000------38999999999868

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=3e-18  Score=136.41  Aligned_cols=105  Identities=20%  Similarity=0.136  Sum_probs=95.4

Q ss_pred             CHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             39999998299888999986799953038999977789998299999999997499999888999999999989999997
Q 001410          701 GVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSRTPSDLASS  780 (1082)
Q Consensus       701 TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~TPLhlAa~  780 (1082)
                      ++||.||..|+.++++.|++.|+++|.+|..|+||||+|+..|+.+++++|+++|++++.      +|..|+||||+|+.
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~------~d~~g~tpLh~A~~   76 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA------ADSDGWTPLHCAAS   76 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTC------CCTTCCCHHHHHHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCCCCCCCCCH
T ss_conf             999999993999999999986997561002111111222222222222222222222222------12367642223210


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCC-CCCCHHHHH
Q ss_conf             497999999998389743445755889-899699988
Q 001410          781 NGHKGISGFLAESSLTSLLLSLKMNDS-ADDGALEDS  816 (1082)
Q Consensus       781 ~Gh~eiv~~Lle~g~~~~~adln~~d~-~g~tal~~a  816 (1082)
                      .|+.+++++|+++|++     ++..+. .+.+++.++
T Consensus        77 ~g~~~~v~~Ll~~ga~-----v~~~~~~~~~~~~~~~  108 (130)
T d1ycsb1          77 CNNVQVCKFLVESGAA-----VFAMTYSDMQTAADKC  108 (130)
T ss_dssp             TTCHHHHHHHHHTTCC-----TTCCCSSSCCCHHHHC
T ss_pred             HHHHHHHHHHHHCCCC-----CCCCCCCCCCCHHHHH
T ss_conf             2688999999986998-----6646689998899999

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=4.8e-18  Score=135.07  Aligned_cols=121  Identities=18%  Similarity=0.179  Sum_probs=106.6

Q ss_pred             CCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCC-CHHH
Q ss_conf             999399999982998889999867999530389999777899982999999999974999998889999999999-8999
Q 001410          698 EGQGVLHLAASLGYDWAIKPTVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPGLLTDPSPEFPLSR-TPSD  776 (1082)
Q Consensus       698 ~G~TpLHlAa~~G~~~iv~~LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvna~tdp~~~D~~G~-TPLh  776 (1082)
                      .+.++||+||..|+.+++++|+++|+++|.+|..|+||||+|+ .|+.+++++|+.+|++++..+      ..+. ||||
T Consensus         2 p~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~------~~~~~~~L~   74 (125)
T d1bi7b_           2 PSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCAD------PATLTRPVH   74 (125)
T ss_dssp             CSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCC------TTTCCCHHH
T ss_pred             CCHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCC------CCCCCCCCC
T ss_conf             8705999999877999999999859741332221222222222-222222221222222222222------222222222


Q ss_pred             HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf             999749799999999838974344575588989969998899999999982279
Q 001410          777 LASSNGHKGISGFLAESSLTSLLLSLKMNDSADDGALEDSIAKAVQTVSEKTAT  830 (1082)
Q Consensus       777 lAa~~Gh~eiv~~Lle~g~~~~~adln~~d~~g~tal~~aa~~~v~~Lle~~a~  830 (1082)
                      +|+..|+.+++++|++.|++     ++.++..|.||++.+...+...+++.+.+
T Consensus        75 ~A~~~g~~~~v~~Ll~~ga~-----~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          75 DAAREGFLDTLVVLHRAGAR-----LDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHTCHHHHHHHHHHTCC-----SSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             CCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCHHHHHHHCCCHHHHHHHHH
T ss_conf             22232222222222122222-----33245789899999998687999999995

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.66  E-value=3.4e-15  Score=115.84  Aligned_cols=116  Identities=12%  Similarity=-0.005  Sum_probs=78.9

Q ss_pred             HHHHHHHHHCCCCCCCCC---CCCHHHHHHHHHHH---HCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHH
Q ss_conf             789988761299876675---74125999999998---269999999997899998557999939999998299888999
Q 001410          644 EEESYQMVEANPEKNLSQ---HVEKYQILQKIMKE---KLYSWLLRKVCEDGKGPCILDDEGQGVLHLAASLGYDWAIKP  717 (1082)
Q Consensus       644 e~~~~Ll~~gad~n~~s~---~~~~~~~l~~~a~~---~~~~~lv~~Ll~~Gadin~~d~~G~TpLHlAa~~G~~~iv~~  717 (1082)
                      ..+..++..+.+.+....   ....+.++++.+..   .+...++++|++.|++++.+|..|+||||+||..|+.+++++
T Consensus        20 ~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~   99 (154)
T d1dcqa1          20 FGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKL   99 (154)
T ss_dssp             HHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf             99999998699867777754578999826999998328998999999997499733313121010001111233332212


Q ss_pred             HHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCC
Q ss_conf             986799953038999977789998299999999997499999
Q 001410          718 TVTAGVSINFRDLSGWTALHWAAYCGREKTVAVLLSLGAAPG  759 (1082)
Q Consensus       718 LL~~Gadin~~D~~G~TpLH~AA~~G~~eiV~~LL~~GAdvn  759 (1082)
                      |+++|++++.+|..|+||||+|+..|+.+++++|++.++..-
T Consensus       100 Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~~  141 (154)
T d1dcqa1         100 LLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRF  141 (154)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCC
T ss_pred             CCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCCC
T ss_conf             213575502447899999999999399999999999388977

>d2cxka1 b.1.18.1 (A:872-953) Calmodulin binding transcription activator 1 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: Calmodulin binding transcription activator 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=1.6e-10  Score=84.43  Aligned_cols=81  Identities=32%  Similarity=0.776  Sum_probs=70.2

Q ss_pred             EEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
Q ss_conf             88515998778997289998146666111234425340499178999998799865689999997169999956996454
Q 001410          498 IIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSNRLACSE  577 (1082)
Q Consensus       498 I~d~sP~wa~~~ggtkVlI~G~f~~~~~~~~~~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~ng~~cse  577 (1082)
                      |++++|.|+++.|||+|.|.|.+|....     .+.|+||+..+.+..+..+.++|..|+|.+|.+++.++..+... +.
T Consensus         2 It~isP~~G~~~GGt~V~I~G~~f~~~~-----~~~c~fG~~~~~~~~vs~~~i~C~tP~~~~G~v~v~Vs~ng~~~-s~   75 (82)
T d2cxka1           2 VTDYSPEWSYPEGGVKVLITGPWQEASN-----NYSCLFDQISVPASLIQPGVLRCYCPAHDTGLVTLQVAFNNQII-SN   75 (82)
T ss_dssp             CCEEECSEECTTCCCEEEEESSCCCCSS-----CEEEEETTEEEECEEEETTEEEEECCCCCSEEEEEEEEETTEEC-SC
T ss_pred             EEEECCCCEECCCCEEEEEEECCCCCCC-----EEEEEEEEEECCEEEEEEEEEEEECCCCCCEEEEEEEEECCEEE-CC
T ss_conf             9398189660899999999973666445-----07999972003059971259999847535615899999899981-36


Q ss_pred             EEEEEEC
Q ss_conf             3554200
Q 001410          578 VREFDYI  584 (1082)
Q Consensus       578 vv~feyl  584 (1082)
                      .+.|+|+
T Consensus        76 ~~~F~Yr   82 (82)
T d2cxka1          76 SVVFEYK   82 (82)
T ss_dssp             CEEEEEC
T ss_pred             CCEEEEC
T ss_conf             7088859

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.51  E-value=2e-08  Score=70.30  Aligned_cols=48  Identities=19%  Similarity=0.306  Sum_probs=39.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCC---EEEEEHHHHHHHHHHHHHH
Q ss_conf             48999999988778662999999996427---0756344342199999899
Q 001410          903 DGLAHSAAIQIQKKFRGWKKRKEFLLIRQ---RIVKIQAHVRGHQARKKYR  950 (1082)
Q Consensus       903 ~~~l~~aAi~IQ~~~Rg~~~Rk~f~~~R~---aai~IQa~~Rg~~aRk~y~  950 (1082)
                      ...+..+|+.||++||||++||+|+++|.   ++++||++||+|++||+|+
T Consensus       727 ~~~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~  777 (789)
T d1kk8a2         727 DERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  777 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             999999999999999999999999999999999999999999999980369

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=98.51  E-value=1.5e-08  Score=71.19  Aligned_cols=49  Identities=27%  Similarity=0.305  Sum_probs=36.9

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHH---CCEEEEEHHHHHHHHHHHHHHH
Q ss_conf             489999999887786629999999964---2707563443421999998999
Q 001410          903 DGLAHSAAIQIQKKFRGWKKRKEFLLI---RQRIVKIQAHVRGHQARKKYRP  951 (1082)
Q Consensus       903 ~~~l~~aAi~IQ~~~Rg~~~Rk~f~~~---R~aai~IQa~~Rg~~aRk~y~~  951 (1082)
                      .+.+..+++.||++||||++|++|+++   |.|+++||++||+|++||.|..
T Consensus       731 ~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~~~  782 (794)
T d2mysa2         731 DDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHWPW  782 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
T ss_conf             9999999999999999999999999999999999999999999999823699

>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]

Probab=98.04  E-value=2e-06  Score=56.87  Aligned_cols=52  Identities=17%  Similarity=0.098  Sum_probs=37.5

Q ss_pred             HHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHC
Q ss_conf             99999996427075634434219999989999---99999999999999998201
Q 001410          921 KKRKEFLLIRQRIVKIQAHVRGHQARKKYRPI---IWSVGILEKVILRWRRKGSG  972 (1082)
Q Consensus       921 ~~Rk~f~~~R~aai~IQa~~Rg~~aRk~y~~~---~~aa~~IQ~~~R~~~~rr~~  972 (1082)
                      +.+++-..+.+++++||++||||++|++|+++   +.|+++||+.||+|+.||.+
T Consensus       726 LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~  780 (794)
T d2mysa2         726 LEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW  780 (794)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             9999999999999999999999999999999999999999999999999998236

>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.04  E-value=2.2e-06  Score=56.49  Aligned_cols=47  Identities=23%  Similarity=0.361  Sum_probs=36.0

Q ss_pred             HHHCCEEEEEHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHCC
Q ss_conf             9642707563443421999998999999---9999999999999982011
Q 001410          927 LLIRQRIVKIQAHVRGHQARKKYRPIIW---SVGILEKVILRWRRKGSGL  973 (1082)
Q Consensus       927 ~~~R~aai~IQa~~Rg~~aRk~y~~~~~---aa~~IQ~~~R~~~~rr~~~  973 (1082)
                      ..+.+++++||++||||++||+|++++.   ++..||+.||+|+.||++.
T Consensus       728 ~~l~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~  777 (789)
T d1kk8a2         728 ERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQ  777 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             99999999999999999999999999999999999999999999980369

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=95.91  E-value=0.003  Score=35.46  Aligned_cols=30  Identities=20%  Similarity=0.256  Sum_probs=24.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Q ss_conf             999999999999997206589999999999
Q 001410         1006 QTEERLQKALGRVKSMVQYPEARAQYRRLL 1035 (1082)
Q Consensus      1006 q~e~r~~~a~~riqs~~r~~~AR~~yrrl~ 1035 (1082)
                      +.++++.+++++||++||++.+|++|.|++
T Consensus       700 ~r~~~l~~~~~~iQ~~~R~~l~Rk~~~r~r  729 (730)
T d1w7ja2         700 IRADKLRAACIRIQKTIRGWLMRKKYMRMR  729 (730)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             999999999999999999999999999861

>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Chicken (Gallus gallus), Va isoform [TaxId: 9031]

Probab=94.25  E-value=0.006  Score=33.38  Aligned_cols=52  Identities=10%  Similarity=0.222  Sum_probs=24.8

Q ss_pred             CCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCEEECCCCCCCCCCCCEEEEEHHHHHHHH
Q ss_conf             981019999999987119947999998402350511269999999847854124243320
Q 001410           10 APRLDMQQLQMEAQHRWLRPAEICEILCNYQKFHIASEPPSRPPSGSLFLFDRKVLRYFR   69 (1082)
Q Consensus        10 ~~~~d~~~~~~~~~~rw~~~~e~~~~l~~~~~~~~~~~~~~~p~~g~~~l~~r~~~~~~r   69 (1082)
                      .+.|+=..++..-+.|..+...|+-    +----+-.-.|.++-.    +|+.++++.|+
T Consensus        15 L~~l~e~~vl~~L~~Ry~~~~~iYT----~~G~iLiaiNP~~~~~----~y~~~~~~~y~   66 (730)
T d1w7ja2          15 LSYLHEPAVLHNLKVRFIDSKLIYT----YCGIVLVAINPYEQLP----IYGEDIINAYS   66 (730)
T ss_dssp             CSCCSHHHHHHHHHHHHHHHCCCEE----EETTEEEEECCSSCCS----CCSHHHHHHHT
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCEEE----EECCEEEEECCCCCCC----CCCHHHHHHHC
T ss_conf             8989989999999998661796056----4888899978998889----99989999970

>d1p7hl1 b.1.18.1 (L:576-678) T-cell transcription factor NFAT1 (NFATC2) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain
domain: T-cell transcription factor NFAT1 (NFATC2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.67  E-value=0.0011  Score=38.33  Aligned_cols=83  Identities=18%  Similarity=0.225  Sum_probs=54.3

Q ss_pred             CCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCHH------------HHHHHHCCCCCCCCCC-CCC
Q ss_conf             842888515998778997289998146666111234425340499178------------9999987998656899-999
Q 001410          494 QLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEV------------PAEVLADGVLCCRIPP-HAV  560 (1082)
Q Consensus       494 q~fsI~d~sP~wa~~~ggtkVlI~G~f~~~~~~~~~~~~ac~fG~veV------------v~~LLq~GvlrC~~p~-~~~  560 (1082)
                      ++..|+++||.-++..||++|.|+|..+...       ..|.||+...            ...+....+++|..|+ +..
T Consensus         1 ~~P~I~~~s~~sgpv~GG~ev~llg~~f~~~-------~~V~F~e~~~~~~~~We~~~~~~~~v~~q~aIv~~tPpy~~~   73 (103)
T d1p7hl1           1 ELPMVERQDTDSCLVYGGQQMILTGQNFTSE-------SKVVFTEKTTDGQQIWEMEATVDKDKSQPNMLFVEIPEYRNK   73 (103)
T ss_dssp             CCCEEEEESCSEEETTCCCEEEEEEESCCSS-------CEEEEEEECSSSCEEEEEEECBCTTTCBTTEEEEECCCCSCT
T ss_pred             CCCEEEEECCCCCCCCCCCEEEEEECCCCCC-------CEEEEEECCCCCCEEEEEEEECCCCCEEEEEEEEECCCCCCC
T ss_conf             9986999869973048983899996663898-------789987107886287899631381016100799977998799


Q ss_pred             CC---HH--HHHHHHCCCCCCCEEEEEEC
Q ss_conf             97---16--99999569964543554200
Q 001410          561 GR---VP--FYITCSNRLACSEVREFDYI  584 (1082)
Q Consensus       561 G~---tP--L~vA~~ng~~csevv~feyl  584 (1082)
                      +.   |.  +++.. +...+++...|.|.
T Consensus        74 ~i~~pV~V~v~l~~-s~~~~S~~~~FtY~  101 (103)
T d1p7hl1          74 HIRTPVKVNFYVIN-GKRKRSQPQHFTYH  101 (103)
T ss_dssp             TCSSCEEEEEEEEE-TTTEECCCEEEEEE
T ss_pred             CCCCCEEEEEEEEC-CCCCCCCCCCEEEE
T ss_conf             87525799999982-99830698787996

>d1qhoa1 b.1.18.2 (A:496-576) Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Five domain "maltogenic" alpha-amylase (glucan 1,4-alpha-maltohydrolase), domain D
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=91.37  E-value=0.00092  Score=38.89  Aligned_cols=68  Identities=16%  Similarity=0.194  Sum_probs=54.1

Q ss_pred             EEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf             2888515998778997289998146666111234425340499178999998799865689999997169999956
Q 001410          496 FSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEVPAEVLADGVLCCRIPPHAVGRVPFYITCSN  571 (1082)
Q Consensus       496 fsI~d~sP~wa~~~ggtkVlI~G~f~~~~~~~~~~~~ac~fG~veVv~~LLq~GvlrC~~p~~~~G~tPL~vA~~n  571 (1082)
                      ..|+.++|..+.  +|+.|.|.|.+|.+.      ...|.+|...+....+....++|..|++..|.+++.+...+
T Consensus         4 P~I~si~P~~g~--~Gt~VtI~G~~F~~~------~~~v~~g~~~~~v~~~s~t~I~c~vP~~~~g~~~v~V~~~g   71 (81)
T d1qhoa1           4 PQIGSVAPNMGI--PGNVVTIDGKGFGTT------QGTVTFGGVTATVKSWTSNRIEVYVPNMAAGLTDVKVTAGG   71 (81)
T ss_dssp             CEEEEEESSEEC--TTCEEEEEEECCCSS------CCEEEETTEECCEEEECSSEEEEECCSCCCEEEEEEEEETT
T ss_pred             CEEEEEECCCCC--CCCEEEEEEECCCCC------CEEEEECCEEEEEEEECCCEEEEEECCCCCCEEEEEEEECC
T ss_conf             999389799779--998999999899899------75899799888999978997999907999934899999799

>d1uadc_ b.1.18.18 (C:) Exocyst complex component Sec5, Ral-binding domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: Other IPT/TIG domains
domain: Exocyst complex component Sec5, Ral-binding domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=88.62  E-value=0.0036  Score=34.85  Aligned_cols=87  Identities=15%  Similarity=0.148  Sum_probs=57.4

Q ss_pred             CCEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCH--HHHHHHHCCCCCCCCCCCCCCCHHHHHHHHC
Q ss_conf             84288851599877899728999814666611123442534049917--8999998799865689999997169999956
Q 001410          494 QLFSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVE--VPAEVLADGVLCCRIPPHAVGRVPFYITCSN  571 (1082)
Q Consensus       494 q~fsI~d~sP~wa~~~ggtkVlI~G~f~~~~~~~~~~~~ac~fG~ve--Vv~~LLq~GvlrC~~p~~~~G~tPL~vA~~n  571 (1082)
                      +-..|+.++|..+.  +||.|.|.|..|.....   .-..+.+|..+  +....+....++|..|++..|..++.+...+
T Consensus         3 ~PP~ItsisP~~G~--gGT~VTI~G~~f~~~~s---~~~~V~v~g~~~~~~~~~~s~~~I~c~tp~~~~g~~~v~v~~~~   77 (92)
T d1uadc_           3 QPPLVTGISPNEGI--PWTKVTIRGENLGTGPT---DLIGLTICGHNCLLTAEWMSASKIVCRVGQAKNDKGDIIVTTKS   77 (92)
T ss_dssp             CCCEEEEEESSEES--TTCEEEEEEECSCSSGG---GEEEEEETTEECGGGCEEEETTEEEEECCCCSSSSCCEEEEETT
T ss_pred             CCCEEEEEECCCCC--CCCEEEEEEECCCCCCC---CCEEEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCEEEEECC
T ss_conf             89997699599789--99599999978789877---53489990643588760278619999768988852189999929


Q ss_pred             CCCCCCEEEEEECC
Q ss_conf             99645435542002
Q 001410          572 RLACSEVREFDYIV  585 (1082)
Q Consensus       572 g~~csevv~feyl~  585 (1082)
                      +-.......|+|+.
T Consensus        78 g~~~ts~~~F~y~~   91 (92)
T d1uadc_          78 GGRGTSTVSFKLLK   91 (92)
T ss_dssp             TEECEESSCCEECC
T ss_pred             CCEEEECCEEEEEC
T ss_conf             98699818899729

>d1cxla1 b.1.18.2 (A:497-583) Cyclomaltodextrin glycanotransferase, domain D {Bacillus circulans, different strains [TaxId: 1397]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: E set domains
family: E-set domains of sugar-utilizing enzymes
domain: Cyclomaltodextrin glycanotransferase, domain D
species: Bacillus circulans, different strains [TaxId: 1397]

Probab=88.50  E-value=0.0077  Score=32.67  Aligned_cols=81  Identities=19%  Similarity=0.274  Sum_probs=57.4

Q ss_pred             EEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCHHHCCCCCHH-HHHH--HHCCCCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             2888515998778997289998146666111234425340499178-9999--987998656899999971699999569
Q 001410          496 FSIIDFSPKWTYTDPEIEVVVTGMFLKSHQEVAKCKWSCMFAEVEV-PAEV--LADGVLCCRIPPHAVGRVPFYITCSNR  572 (1082)
Q Consensus       496 fsI~d~sP~wa~~~ggtkVlI~G~f~~~~~~~~~~~~ac~fG~veV-v~~L--Lq~GvlrC~~p~~~~G~tPL~vA~~ng  572 (1082)
                      ..|+.++|.++.  +|+.|.|.|..|....      -.+.+|.... +..+  +.+..++|..|++.+|..++.+...++
T Consensus         3 P~I~sisP~~g~--~Gt~VTI~G~~F~~~~------~~V~v~~~~~~~~~v~s~s~t~I~~~vP~~~~g~~~v~V~~~~g   74 (87)
T d1cxla1           3 PTIGHVGPMMAK--PGVTITIDGRGFGSSK------GTVYFGTTAVSGADITSWEDTQIKVKIPAVAGGNYNIKVANAAG   74 (87)
T ss_dssp             CEEEEEECSEEC--TTCEEEEEEECCCSSC------CEEEETTEEEEGGGEEEEETTEEEEECCCCCSEEEEEEEECTTC
T ss_pred             CEEEEEECCCCC--CCCEEEEEEECCCCCC------CEEEEEEECCCEEEEEEECCCEEEEEECCCCCCEEEEEEEECCC
T ss_conf             999798489789--9989999989978998------55999613572799999689999999789998207999996999


Q ss_pred             CCCCCEEEEEEC
Q ss_conf             964543554200
Q 001410          573 LACSEVREFDYI  584 (1082)
Q Consensus       573 ~~csevv~feyl  584 (1082)
                      ........|+||
T Consensus        75 ~~s~~~~~F~~l   86 (87)
T d1cxla1          75 TASNVYDNFEVL   86 (87)
T ss_dssp             CBCCCEEEEEEC
T ss_pred             CEEEECCCEEEE
T ss_conf             378003766990