Citrus Sinensis ID: 001460
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1074 | 2.2.26 [Sep-21-2011] | |||||||
| Q6PDQ2 | 1915 | Chromodomain-helicase-DNA | yes | no | 0.059 | 0.033 | 0.430 | 7e-11 | |
| O97159 | 1982 | Chromodomain-helicase-DNA | yes | no | 0.039 | 0.021 | 0.522 | 2e-10 | |
| O16102 | 892 | Chromodomain-helicase-DNA | no | no | 0.040 | 0.049 | 0.5 | 2e-10 | |
| Q14839 | 1912 | Chromodomain-helicase-DNA | yes | no | 0.045 | 0.025 | 0.490 | 2e-10 | |
| Q99PP7 | 1142 | E3 ubiquitin-protein liga | no | no | 0.069 | 0.065 | 0.409 | 6e-10 | |
| Q9UPN9 | 1127 | E3 ubiquitin-protein liga | no | no | 0.054 | 0.051 | 0.446 | 6e-10 | |
| Q8TDI0 | 1954 | Chromodomain-helicase-DNA | no | no | 0.039 | 0.021 | 0.522 | 7e-10 | |
| Q96QT6 | 1004 | PHD finger protein 12 OS= | no | no | 0.043 | 0.046 | 0.509 | 3e-09 | |
| Q5SPL2 | 1003 | PHD finger protein 12 OS= | no | no | 0.043 | 0.046 | 0.509 | 3e-09 | |
| Q6E2N3 | 1163 | E3 ubiquitin-protein liga | no | no | 0.043 | 0.040 | 0.489 | 7e-09 |
| >sp|Q6PDQ2|CHD4_MOUSE Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus GN=Chd4 PE=1 SV=1 | Back alignment and function desciption |
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Score = 70.5 bits (171), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Query: 699 KESESIGFESVDVDGDDPNDDT------CGICGDGGDLICCDGCPSTFHQSCLDIQM--L 750
KE S G E ++ G DP ++ C +C DGG+L+CCD CPS++H CL+ + +
Sbjct: 417 KEDNSEGEEILEEVGGDPEEEDDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEI 476
Query: 751 PPGDWHCPNCTC 762
P G+W CP CTC
Sbjct: 477 PNGEWLCPRCTC 488
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Component of the histone deacetylase NuRD complex which participates in the remodeling of chromatin by deacetylating histones. Mus musculus (taxid: 10090) EC: 3EC: .EC: 6EC: .EC: 4EC: .EC: 1EC: 2 |
| >sp|O97159|CHDM_DROME Chromodomain-helicase-DNA-binding protein Mi-2 homolog OS=Drosophila melanogaster GN=Mi-2 PE=1 SV=2 | Back alignment and function description |
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| >sp|O16102|CHD3_DROME Chromodomain-helicase-DNA-binding protein 3 OS=Drosophila melanogaster GN=Chd3 PE=2 SV=3 | Back alignment and function description |
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| >sp|Q14839|CHD4_HUMAN Chromodomain-helicase-DNA-binding protein 4 OS=Homo sapiens GN=CHD4 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q99PP7|TRI33_MOUSE E3 ubiquitin-protein ligase TRIM33 OS=Mus musculus GN=Trim33 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q9UPN9|TRI33_HUMAN E3 ubiquitin-protein ligase TRIM33 OS=Homo sapiens GN=TRIM33 PE=1 SV=3 | Back alignment and function description |
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| >sp|Q8TDI0|CHD5_HUMAN Chromodomain-helicase-DNA-binding protein 5 OS=Homo sapiens GN=CHD5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q96QT6|PHF12_HUMAN PHD finger protein 12 OS=Homo sapiens GN=PHF12 PE=1 SV=2 | Back alignment and function description |
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| >sp|Q5SPL2|PHF12_MOUSE PHD finger protein 12 OS=Mus musculus GN=Phf12 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6E2N3|TRI33_DANRE E3 ubiquitin-protein ligase TRIM33 OS=Danio rerio GN=trim33 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1074 | ||||||
| 255552191 | 1604 | hypothetical protein RCOM_0912170 [Ricin | 0.950 | 0.636 | 0.641 | 0.0 | |
| 449444240 | 1314 | PREDICTED: uncharacterized protein LOC10 | 0.946 | 0.773 | 0.635 | 0.0 | |
| 359477348 | 1547 | PREDICTED: uncharacterized protein LOC10 | 0.910 | 0.632 | 0.641 | 0.0 | |
| 356540325 | 1254 | PREDICTED: uncharacterized protein LOC10 | 0.908 | 0.778 | 0.627 | 0.0 | |
| 356540327 | 1301 | PREDICTED: uncharacterized protein LOC10 | 0.927 | 0.765 | 0.613 | 0.0 | |
| 356495799 | 1314 | PREDICTED: uncharacterized protein LOC10 | 0.927 | 0.757 | 0.606 | 0.0 | |
| 449492632 | 1213 | PREDICTED: uncharacterized LOC101210263 | 0.831 | 0.736 | 0.650 | 0.0 | |
| 297737048 | 1264 | unnamed protein product [Vitis vinifera] | 0.761 | 0.647 | 0.562 | 0.0 | |
| 334186543 | 1138 | Acyl-CoA N-acyltransferase with RING/FYV | 0.901 | 0.850 | 0.518 | 0.0 | |
| 110741207 | 1138 | hypothetical protein [Arabidopsis thalia | 0.855 | 0.807 | 0.502 | 0.0 |
| >gi|255552191|ref|XP_002517140.1| hypothetical protein RCOM_0912170 [Ricinus communis] gi|223543775|gb|EEF45303.1| hypothetical protein RCOM_0912170 [Ricinus communis] | Back alignment and taxonomy information |
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Score = 1270 bits (3287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/1094 (64%), Positives = 800/1094 (73%), Gaps = 73/1094 (6%)
Query: 1 MAESRRSGDQSGIVVKNRSSSGCLIVRKKSDDVSVAGSSGA-----QKGFRSKKGKKRPR 55
M E RRSGD SG +VKNRSSSGCLIVRKK ++ + +K SKK KKR R
Sbjct: 1 MEEGRRSGDPSGFMVKNRSSSGCLIVRKKGNNDGIGIGGVVGSSGSRKFSGSKKEKKRAR 60
Query: 56 MVMSDSGSSDELLMPPRRRVGPETIRVCNGLSGLEKVVVG-EESDFGRNRER-DRDRDTV 113
+ SDSGSSDELL+PP+RRVGPETIRVCNGLS +K + EE+D GR R R D +
Sbjct: 61 LDFSDSGSSDELLIPPQRRVGPETIRVCNGLSLFDKGGINLEENDIGRKRSRGDITGRSS 120
Query: 114 ERVRRNEDGLFGRTEGQSDRKRNRLDVFEFDEYDGSDKEIM-MSQKHLGDTRRD------ 166
+V N G G E S RKRNRLDVFEFDEY+G+D E+M +KH D D
Sbjct: 121 NKVDANVVGRNGE-EDFSARKRNRLDVFEFDEYEGNDVEMMRRRRKHFDDDDDDNNDDDG 179
Query: 167 IGGRRFFGGSMALGRGGIERELESGSGRQVVVDKRKNLYFERTNSFNQGGMNRFGMDRDA 226
I GR GSM +GR GI E ESGS R ++D+RK+ YFERT+ Q G + + R+
Sbjct: 180 IQGRGRLVGSMMMGRSGINMEYESGSSRHPIIDRRKSSYFERTSGLIQEGHHNRDVTRNH 239
Query: 227 GRSPISLLREKYSGNSDGPIRLQGKNGVLKVMVNKKKKVGEPVKSFDHAGTEANCSSSRI 286
R +S R+KY +SD PIR+QGKNGVLKVMVNKKKKVG E N R
Sbjct: 240 PRQ-MSFYRDKY--DSDEPIRVQGKNGVLKVMVNKKKKVG-------GMEVEENRKGLRP 289
Query: 287 EDKVKRNVPIHHSSYLETEVLEKPCSFLRKEKNQLNLRKS-------------------- 326
E+ VKRNV I Y E++ EK S + K+ +N+ +S
Sbjct: 290 EEAVKRNVLIRPPLYSESKSAEKSSSVVGTLKSSMNMLRSSPAKNSSSRNGKVRYHDSED 349
Query: 327 ---------------------LSTKKSKDDDSDSADSDTAPKLGPKRMEACKSVKEVSSE 365
STK K D+ DS DSDT+ KLGPK E KS K SS
Sbjct: 350 SDTSLKLGPKKLDSHNSMKMPPSTKNLKGDEVDSEDSDTSLKLGPKNEEPHKSTKGASSS 409
Query: 366 SEKTPGGKLTLSRIKEGKARRGSGTEKQKLRERIRGMLVEAGWTIDYRPRKNRDYLDAVY 425
E TP + +R KEGK +RG+GTEKQKLRERIR ML+ AGWTIDYRPR+NRDYLDAVY
Sbjct: 410 GEITPSNQRLPTRSKEGKIKRGTGTEKQKLRERIREMLLNAGWTIDYRPRRNRDYLDAVY 469
Query: 426 INPTGTAYWSIIKAYDALTKQLNDEEDEAKPSADGSPFTPLPDEVLSQLTRKTR--KKIE 483
INPTGTAYWSIIKAYDAL KQLNDEE+EA+ S D S F PL DEVLSQLTRKTR + E
Sbjct: 470 INPTGTAYWSIIKAYDALLKQLNDEEEEAR-SKDES-FMPLSDEVLSQLTRKTRKKMEKE 527
Query: 484 KEMKKKQRDGSQSFSTRETSARRTSSARRDEDSMGSGNHEEKLSSFLKQGGKSSKSKMNE 543
+MKKKQRD S+S + RET+AR++SS+R DE+SM SG+HEEKLSSF+KQGGKS KS+MN
Sbjct: 528 MKMKKKQRDVSESENARETAARKSSSSRHDEESMDSGSHEEKLSSFIKQGGKSLKSRMNG 587
Query: 544 NGVVSQNPKGLSSTH-LPDTDENPSSTSGSHQLHGRKSRKLGRCTLLIRNSNVGPNSETD 602
N + N K +S H L E S S SHQ GRKSRKLGRCTLL+RNSN G NSE+D
Sbjct: 588 NSSFNLNTKNQNSIHPLHGAVEQTFSGSNSHQ--GRKSRKLGRCTLLVRNSNEGLNSESD 645
Query: 603 GFVPYAGKLTLLSWLIDSGTVQLSQKVQYMNRRRTKVMLEGWITRDGIHCGCCSKILTVS 662
GFVPYAGK TLLSWLID G VQLSQKV+YMNRRRTKVMLEGW+TRDGIHCGCCSKILTVS
Sbjct: 646 GFVPYAGKRTLLSWLIDCGAVQLSQKVRYMNRRRTKVMLEGWVTRDGIHCGCCSKILTVS 705
Query: 663 KFEIHAGSKLRQPFQNIYLDSGVSLLQCQIDAWNKLKESESIGFESVDVDGDDPNDDTCG 722
KFEIHAGSKLRQPFQNIYLDSGVSLL+CQIDAWN+ + E IGF SV+ DGDDPNDDTCG
Sbjct: 706 KFEIHAGSKLRQPFQNIYLDSGVSLLECQIDAWNRQESIERIGFHSVNTDGDDPNDDTCG 765
Query: 723 ICGDGGDLICCDGCPSTFHQSCLDIQMLPPGDWHCPNCTCKFCGLAGEDDAEGDDTTTSA 782
ICGDGGDLICCDGCPSTFHQSCLDI MLPPGDWHCPNCTCKFCG+A ED + D T S
Sbjct: 766 ICGDGGDLICCDGCPSTFHQSCLDIMMLPPGDWHCPNCTCKFCGIASEDFVQEDGTNVSE 825
Query: 783 LLPCAMCEKKYHKLCMQEMDALSDNLTGLVTSFCGRKCQELSEHLQKYLGVKHELEAGLS 842
LL C++C KKYHK C+Q++DA + FCG+ C+EL E LQKYLG+KHELE+G S
Sbjct: 826 LLTCSLCAKKYHKSCLQDVDAPCIDFNNSTPCFCGKTCRELFEQLQKYLGIKHELESGFS 885
Query: 843 WSLIHRSDEDSDTSLRGLPQRVECNSKLAVALNVMDECFLPIVDRRSGINLIHNVLYNSG 902
WSL+HR D D D SL+GLPQRVECNSKLAVAL+VMDECFLPIVDRRSGIN+I NVLYN G
Sbjct: 886 WSLVHRMDIDLDMSLQGLPQRVECNSKLAVALSVMDECFLPIVDRRSGINIIQNVLYNCG 945
Query: 903 SNFNRLNYSGFYTAILERGDEIISAASIRFHGTQLAEMPFIGTRHIYRRQGMCRRLFCAL 962
SNFNRLNYSGFY AILERGDEIISAASIRFHGTQLAEMPFIGTRH+YRRQGMCRRLF A+
Sbjct: 946 SNFNRLNYSGFYAAILERGDEIISAASIRFHGTQLAEMPFIGTRHVYRRQGMCRRLFSAI 1005
Query: 963 ESALCSLKVEKLIIPAIAELMHTWTRVFGFTSLEESLKQEMRSLNMLVFPGIDMLQKLLL 1022
ESALCSLKV+KLIIPAI+EL HTWT VFGFT+L +SLKQE++S+NMLVFPGIDMLQK LL
Sbjct: 1006 ESALCSLKVQKLIIPAISELTHTWTGVFGFTTLSDSLKQELKSMNMLVFPGIDMLQKQLL 1065
Query: 1023 EQEGIKENISASQG 1036
E+E N++ S G
Sbjct: 1066 EKENTDGNMTLSAG 1079
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Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|449444240|ref|XP_004139883.1| PREDICTED: uncharacterized protein LOC101210263 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|359477348|ref|XP_002278432.2| PREDICTED: uncharacterized protein LOC100247619 [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|356540325|ref|XP_003538640.1| PREDICTED: uncharacterized protein LOC100801320 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356540327|ref|XP_003538641.1| PREDICTED: uncharacterized protein LOC100801863 [Glycine max] | Back alignment and taxonomy information |
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| >gi|356495799|ref|XP_003516760.1| PREDICTED: uncharacterized protein LOC100814247 [Glycine max] | Back alignment and taxonomy information |
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| >gi|449492632|ref|XP_004159054.1| PREDICTED: uncharacterized LOC101210263 [Cucumis sativus] | Back alignment and taxonomy information |
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| >gi|297737048|emb|CBI26249.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
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| >gi|334186543|ref|NP_193228.6| Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] gi|225898777|dbj|BAH30519.1| hypothetical protein [Arabidopsis thaliana] gi|332658123|gb|AEE83523.1| Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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| >gi|110741207|dbj|BAF02154.1| hypothetical protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
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Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1074 | ||||||
| TAIR|locus:2201021 | 1138 | AT1G05380 "AT1G05380" [Arabido | 0.601 | 0.567 | 0.560 | 4.7e-208 | |
| TAIR|locus:2147391 | 1179 | AT5G36740 [Arabidopsis thalian | 0.448 | 0.408 | 0.439 | 5.7e-133 | |
| TAIR|locus:2832118 | 1193 | AT5G36670 [Arabidopsis thalian | 0.448 | 0.404 | 0.406 | 1.5e-120 | |
| TAIR|locus:2086395 | 1189 | ROS4 "AT3G14980" [Arabidopsis | 0.408 | 0.369 | 0.373 | 2e-83 | |
| TAIR|locus:2178828 | 1065 | AT5G58610 "AT5G58610" [Arabido | 0.197 | 0.199 | 0.354 | 4e-43 | |
| TAIR|locus:2040550 | 1007 | AT2G36720 "AT2G36720" [Arabido | 0.250 | 0.267 | 0.300 | 4.4e-30 | |
| TAIR|locus:2163961 | 557 | AT5G63900 "AT5G63900" [Arabido | 0.224 | 0.432 | 0.305 | 4.3e-28 |
| TAIR|locus:2201021 AT1G05380 "AT1G05380" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1863 (660.9 bits), Expect = 4.7e-208, Sum P(3) = 4.7e-208
Identities = 371/662 (56%), Positives = 450/662 (67%)
Query: 380 KEGKARRGSGTEKQKLRERIRGMLVEAGWTIDYRPRKNRDYLDAVYINPTGTAYWSIIKA 439
+E + RRG GT+KQ+LRERI+GML +AGWTIDY+PR+N+ YLDAVY+NP+GTAYWSIIKA
Sbjct: 300 EERRGRRGGGTDKQRLRERIKGMLTDAGWTIDYKPRRNQSYLDAVYVNPSGTAYWSIIKA 359
Query: 440 YDALTKQLNDEEDEAKPSADGSPFTPLPDEVLSQLXXXXXXXXXXXXXXXQRDGSQSFXX 499
YDAL KQL DE +A+P D + + +E++++L +++ S S
Sbjct: 360 YDALLKQLKDEGVDARPRKDTAAVASVSEEIVNKLARKAKKTRSEMTKKWKQNSSGSDSE 419
Query: 500 XXXXXXXXXXXXXXXXXMGSGNHEEKLSSFLKQGGKSSKSKMNENGVVSQNPKGLSSTHL 559
EE++ S +K GGKS+K NG S L
Sbjct: 420 NKSEGGAYTDTS-----------EERIRSSIKLGGKSTKK--GRNGADWDELHKKSKRSL 466
Query: 560 PDTDENPSSTSGSHQLHGRKSRKLGRCTLLIRNSNVGPNSETDGFVPYAGKLTLLSWLID 619
+ PS S SH LHGRK++K+GRCTLL+R+S N +GF PY+GK TLLSWLI+
Sbjct: 467 YYNNARPSCGSDSHYLHGRKTKKIGRCTLLVRSSKDKKNPAINGFNPYSGKRTLLSWLIE 526
Query: 620 SGTVQLSQKVQYMNRRRTKVMLEGWITRDGIHCGCCSKILTVSKFEIHAGSKLRQPFQNI 679
SG VQL QKVQYM RR KVMLEGWITR+GIHC CCSKILTVS+FEIHAGSK QPFQNI
Sbjct: 527 SGVVQLRQKVQYMRRRGAKVMLEGWITREGIHCDCCSKILTVSRFEIHAGSKSCQPFQNI 586
Query: 680 YLDSGVSLLQCQIDAWNKLKESESIGFESVXXXXXXXXXXXXXXXXXXXXXXXXXXXPST 739
YL+SG SLLQCQ+ AWN K++ ++ V PST
Sbjct: 587 YLESGASLLQCQVRAWNMQKDATNLALHQVDTDGDDPNDDACGICGDGGDLICCDGCPST 646
Query: 740 FHQSCLDIQMLPPGDWHCPNCTCKFCGLXXXXXXXXXXXXXSALLPCAMCEKKYHKLCMQ 799
+HQ+CL +Q+LP GDWHCPNCTCKFC +LL C MCE++YH+LC+
Sbjct: 647 YHQNCLGMQVLPSGDWHCPNCTCKFCDAAVASGGKDGNFI--SLLSCGMCERRYHQLCLN 704
Query: 800 EMDALSDNLTGLVTSFCGRKCQELSEHLQKYLGVKHELEAGLSWSLIHRSDEDSDTSLRG 859
+ +A G +SFCG KC EL E LQKYLGVK E+E G SWSLIHR D DSDT+ +
Sbjct: 705 D-EAHKVQSFGSASSFCGPKCLELFEKLQKYLGVKTEIEGGYSWSLIHRVDTDSDTNSQM 763
Query: 860 LPQRVECNSKLAVALNVMDECFLPIVDRRSGINLIHNVLYNSGSNFNRLNYSGFYTAILE 919
QR+E NSKLAV L +MDECFLPIVDRRSG++LI NVLYN GSNFNR+NY+GFYTAILE
Sbjct: 764 SAQRIENNSKLAVGLAIMDECFLPIVDRRSGVDLIRNVLYNCGSNFNRINYTGFYTAILE 823
Query: 920 RGDEIISAASIRFHGTQLAEMPFIGTRHIYRRQGMCRRLFCALESALCSLKVEKLIIPAI 979
RGDEIISAAS+RFHG QLAEMPFIGTRHIYRRQGMCRRLF A+ESA+ SLKVEKL+IPAI
Sbjct: 824 RGDEIISAASLRFHGMQLAEMPFIGTRHIYRRQGMCRRLFDAIESAMRSLKVEKLVIPAI 883
Query: 980 AELMHTWTRVFGFTSLEESLKQEMRSLNMLVFPGIDMLQKLLLEQEGIKENISASQGSIS 1039
+ +H WT FGFT L++S+++EMRSLN LVFPGIDMLQK LL +E I +A IS
Sbjct: 884 PDFLHAWTGNFGFTPLDDSVRKEMRSLNTLVFPGIDMLQKPLLHEENIIAPAAAGDAMIS 943
Query: 1040 HM 1041
+
Sbjct: 944 EV 945
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| TAIR|locus:2147391 AT5G36740 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2832118 AT5G36670 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2086395 ROS4 "AT3G14980" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2178828 AT5G58610 "AT5G58610" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2040550 AT2G36720 "AT2G36720" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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| TAIR|locus:2163961 AT5G63900 "AT5G63900" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
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 | GSVIVG00019987001 | SubName- Full=Chromosome chr5 scaffold_2, whole genome shotgun sequence; (1391 aa) | ||||||
(Vitis vinifera) | ||||||||
| Sorry, there are no predicted associations at the current settings. |
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1074 | |||
| pfam00628 | 51 | pfam00628, PHD, PHD-finger | 8e-14 | |
| smart00249 | 47 | smart00249, PHD, PHD zinc finger | 2e-11 | |
| cd11726 | 127 | cd11726, ADDz_ATRX, ADDz domain of ATRX (alpha-tha | 3e-06 | |
| COG5141 | 669 | COG5141, COG5141, PHD zinc finger-containing prote | 9e-06 | |
| cd11672 | 120 | cd11672, ADDz, ADDz for ATRX, Dnmt3 and Dnmt3l PHD | 6e-04 |
| >gnl|CDD|201356 pfam00628, PHD, PHD-finger | Back alignment and domain information |
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Score = 66.4 bits (162), Expect = 8e-14
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 721 CGICG---DGGDLICCDGCPSTFHQSCLDIQM----LPPGDWHCPNCTCK 763
C +CG D G+L+ CDGC FH +CL + +P G+W+CP C K
Sbjct: 2 CAVCGKVDDDGELLLCDGCDRWFHLACLGPPLEPEEIPEGEWYCPECKPK 51
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PHD folds into an interleaved type of Zn-finger chelating 2 Zn ions in a similar manner to that of the RING and FYVE domains. Several PHD fingers have been identified as binding modules of methylated histone H3. Length = 51 |
| >gnl|CDD|214584 smart00249, PHD, PHD zinc finger | Back alignment and domain information |
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| >gnl|CDD|213034 cd11726, ADDz_ATRX, ADDz domain of ATRX (alpha-thalassemia/mental retardation, X-linked) | Back alignment and domain information |
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| >gnl|CDD|227470 COG5141, COG5141, PHD zinc finger-containing protein [General function prediction only] | Back alignment and domain information |
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| >gnl|CDD|213032 cd11672, ADDz, ADDz for ATRX, Dnmt3 and Dnmt3l PHD-like zinc finger domain | Back alignment and domain information |
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Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1074 | |||
| PF13508 | 79 | Acetyltransf_7: Acetyltransferase (GNAT) domain; P | 98.9 | |
| PF00583 | 83 | Acetyltransf_1: Acetyltransferase (GNAT) family; I | 98.87 | |
| KOG1512 | 381 | consensus PHD Zn-finger protein [General function | 98.85 | |
| PF13673 | 117 | Acetyltransf_10: Acetyltransferase (GNAT) domain; | 98.84 | |
| COG1246 | 153 | ArgA N-acetylglutamate synthase and related acetyl | 98.83 | |
| KOG0956 | 900 | consensus PHD finger protein AF10 [General functio | 98.83 | |
| KOG1244 | 336 | consensus Predicted transcription factor Requiem/N | 98.73 | |
| PRK07757 | 152 | acetyltransferase; Provisional | 98.73 | |
| PRK10314 | 153 | putative acyltransferase; Provisional | 98.7 | |
| PTZ00330 | 147 | acetyltransferase; Provisional | 98.61 | |
| PRK10146 | 144 | aminoalkylphosphonic acid N-acetyltransferase; Pro | 98.54 | |
| PRK03624 | 140 | putative acetyltransferase; Provisional | 98.52 | |
| PLN02706 | 150 | glucosamine 6-phosphate N-acetyltransferase | 98.49 | |
| PF13527 | 127 | Acetyltransf_9: Acetyltransferase (GNAT) domain; P | 98.45 | |
| PRK07922 | 169 | N-acetylglutamate synthase; Validated | 98.44 | |
| TIGR01575 | 131 | rimI ribosomal-protein-alanine acetyltransferase. | 98.44 | |
| cd02169 | 297 | Citrate_lyase_ligase Citrate lyase ligase. Citrate | 98.42 | |
| PRK09491 | 146 | rimI ribosomal-protein-alanine N-acetyltransferase | 98.37 | |
| KOG4443 | 694 | consensus Putative transcription factor HALR/MLL3, | 98.37 | |
| COG5141 | 669 | PHD zinc finger-containing protein [General functi | 98.33 | |
| KOG4299 | 613 | consensus PHD Zn-finger protein [General function | 98.31 | |
| PLN02825 | 515 | amino-acid N-acetyltransferase | 98.3 | |
| KOG1244 | 336 | consensus Predicted transcription factor Requiem/N | 98.3 | |
| TIGR03827 | 266 | GNAT_ablB putative beta-lysine N-acetyltransferase | 98.29 | |
| PRK10975 | 194 | TDP-fucosamine acetyltransferase; Provisional | 98.28 | |
| TIGR01890 | 429 | N-Ac-Glu-synth amino-acid N-acetyltransferase. Thi | 98.27 | |
| TIGR00124 | 332 | cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP | 98.26 | |
| PRK05279 | 441 | N-acetylglutamate synthase; Validated | 98.22 | |
| TIGR02382 | 191 | wecD_rffC TDP-D-fucosamine acetyltransferase. This | 98.21 | |
| KOG1473 | 1414 | consensus Nucleosome remodeling factor, subunit NU | 98.18 | |
| KOG4443 | 694 | consensus Putative transcription factor HALR/MLL3, | 98.18 | |
| PRK12308 | 614 | bifunctional argininosuccinate lyase/N-acetylgluta | 98.17 | |
| PHA00673 | 154 | acetyltransferase domain containing protein | 98.13 | |
| PRK10140 | 162 | putative acetyltransferase YhhY; Provisional | 98.08 | |
| PRK09831 | 147 | putative acyltransferase; Provisional | 98.05 | |
| PRK13688 | 156 | hypothetical protein; Provisional | 98.02 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 98.0 | |
| KOG0955 | 1051 | consensus PHD finger protein BR140/LIN-49 [General | 97.96 | |
| TIGR02406 | 157 | ectoine_EctA L-2,4-diaminobutyric acid acetyltrans | 97.95 | |
| KOG0954 | 893 | consensus PHD finger protein [General function pre | 97.94 | |
| cd04301 | 65 | NAT_SF N-Acyltransferase superfamily: Various enzy | 97.92 | |
| COG0456 | 177 | RimI Acetyltransferases [General function predicti | 97.88 | |
| TIGR03448 | 292 | mycothiol_MshD mycothiol biosynthesis acetyltransf | 97.87 | |
| KOG1512 | 381 | consensus PHD Zn-finger protein [General function | 97.86 | |
| PF00628 | 51 | PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( | 97.86 | |
| PF13420 | 155 | Acetyltransf_4: Acetyltransferase (GNAT) domain; P | 97.85 | |
| smart00249 | 47 | PHD PHD zinc finger. The plant homeodomain (PHD) f | 97.83 | |
| TIGR03103 | 547 | trio_acet_GNAT GNAT-family acetyltransferase TIGR0 | 97.83 | |
| KOG3139 | 165 | consensus N-acetyltransferase [General function pr | 97.79 | |
| KOG0825 | 1134 | consensus PHD Zn-finger protein [General function | 97.78 | |
| PRK01346 | 411 | hypothetical protein; Provisional | 97.76 | |
| KOG1973 | 274 | consensus Chromatin remodeling protein, contains P | 97.71 | |
| KOG3396 | 150 | consensus Glucosamine-phosphate N-acetyltransferas | 97.69 | |
| PRK10514 | 145 | putative acetyltransferase; Provisional | 97.68 | |
| KOG4299 | 613 | consensus PHD Zn-finger protein [General function | 97.65 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 97.61 | |
| PRK10562 | 145 | putative acetyltransferase; Provisional | 97.6 | |
| KOG0383 | 696 | consensus Predicted helicase [General function pre | 97.59 | |
| PRK15130 | 186 | spermidine N1-acetyltransferase; Provisional | 97.57 | |
| PF08445 | 86 | FR47: FR47-like protein; InterPro: IPR013653 Prote | 97.53 | |
| PHA01807 | 153 | hypothetical protein | 97.52 | |
| KOG4323 | 464 | consensus Polycomb-like PHD Zn-finger protein [Gen | 97.47 | |
| TIGR03585 | 156 | PseH pseudaminic acid biosynthesis N-acetyl transf | 97.42 | |
| PF15446 | 175 | zf-PHD-like: PHD/FYVE-zinc-finger like domain | 97.4 | |
| COG3393 | 268 | Predicted acetyltransferase [General function pred | 97.34 | |
| PF13523 | 152 | Acetyltransf_8: Acetyltransferase (GNAT) domain; P | 97.32 | |
| TIGR01211 | 522 | ELP3 histone acetyltransferase, ELP3 family. The S | 97.32 | |
| COG5034 | 271 | TNG2 Chromatin remodeling protein, contains PhD zi | 97.3 | |
| PF13302 | 142 | Acetyltransf_3: Acetyltransferase (GNAT) domain; P | 97.29 | |
| COG2153 | 155 | ElaA Predicted acyltransferase [General function p | 97.27 | |
| PRK10809 | 194 | ribosomal-protein-S5-alanine N-acetyltransferase; | 97.17 | |
| PRK10151 | 179 | ribosomal-protein-L7/L12-serine acetyltransferase; | 96.97 | |
| PF13718 | 196 | GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2Z | 96.91 | |
| KOG0383 | 696 | consensus Predicted helicase [General function pre | 96.81 | |
| COG3153 | 171 | Predicted acetyltransferase [General function pred | 96.57 | |
| cd04718 | 148 | BAH_plant_2 BAH, or Bromo Adjacent Homology domain | 96.4 | |
| PF08444 | 89 | Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acylt | 96.25 | |
| COG1247 | 169 | Sortase and related acyltransferases [Cell envelop | 96.22 | |
| smart00249 | 47 | PHD PHD zinc finger. The plant homeodomain (PHD) f | 96.0 | |
| PF12746 | 265 | GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S | 95.84 | |
| PF00628 | 51 | PHD: PHD-finger; InterPro: IPR019787 Zinc finger ( | 95.79 | |
| KOG0957 | 707 | consensus PHD finger protein [General function pre | 95.75 | |
| PF12568 | 128 | DUF3749: Acetyltransferase (GNAT) domain; InterPro | 95.64 | |
| KOG1245 | 1404 | consensus Chromatin remodeling complex WSTF-ISWI, | 95.51 | |
| COG0454 | 156 | WecD Histone acetyltransferase HPA2 and related ac | 95.5 | |
| KOG0825 | 1134 | consensus PHD Zn-finger protein [General function | 95.37 | |
| PF13831 | 36 | PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A. | 95.26 | |
| KOG1973 | 274 | consensus Chromatin remodeling protein, contains P | 95.16 | |
| KOG4323 | 464 | consensus Polycomb-like PHD Zn-finger protein [Gen | 95.14 | |
| KOG0957 | 707 | consensus PHD finger protein [General function pre | 95.08 | |
| COG3053 | 352 | CitC Citrate lyase synthetase [Energy production a | 95.02 | |
| COG1444 | 758 | Predicted P-loop ATPase fused to an acetyltransfer | 94.88 | |
| KOG3216 | 163 | consensus Diamine acetyltransferase [Amino acid tr | 94.77 | |
| COG1670 | 187 | RimL Acetyltransferases, including N-acetylases of | 94.39 | |
| KOG3397 | 225 | consensus Acetyltransferases [General function pre | 94.36 | |
| PF14542 | 78 | Acetyltransf_CG: GCN5-related N-acetyl-transferase | 93.97 | |
| KOG2488 | 202 | consensus Acetyltransferase (GNAT) domain-containi | 93.85 | |
| COG2388 | 99 | Predicted acetyltransferase [General function pred | 93.5 | |
| KOG4144 | 190 | consensus Arylalkylamine N-acetyltransferase [Gene | 92.99 | |
| PF13480 | 142 | Acetyltransf_6: Acetyltransferase (GNAT) domain | 92.51 | |
| KOG3138 | 187 | consensus Predicted N-acetyltransferase [General f | 91.66 | |
| COG4552 | 389 | Eis Predicted acetyltransferase involved in intrac | 89.3 | |
| KOG3234 | 173 | consensus Acetyltransferase, (GNAT) family [Genera | 89.17 | |
| COG5034 | 271 | TNG2 Chromatin remodeling protein, contains PhD zi | 87.69 | |
| KOG3235 | 193 | consensus Subunit of the major N alpha-acetyltrans | 85.49 | |
| PF01429 | 77 | MBD: Methyl-CpG binding domain; InterPro: IPR00173 | 83.85 | |
| PF07227 | 446 | DUF1423: Protein of unknown function (DUF1423); In | 83.4 | |
| PF06852 | 181 | DUF1248: Protein of unknown function (DUF1248); In | 83.22 | |
| KOG0955 | 1051 | consensus PHD finger protein BR140/LIN-49 [General | 82.73 | |
| KOG1245 | 1404 | consensus Chromatin remodeling complex WSTF-ISWI, | 81.79 | |
| COG1243 | 515 | ELP3 Histone acetyltransferase [Transcription / Ch | 81.47 | |
| cd01396 | 77 | MeCP2_MBD MeCP2, MBD1, MBD2, MBD3, and MBD4 are me | 80.64 | |
| COG3981 | 174 | Predicted acetyltransferase [General function pred | 80.46 |
| >PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A | Back alignment and domain information |
|---|
Probab=98.90 E-value=1.1e-08 Score=89.81 Aligned_cols=77 Identities=17% Similarity=0.242 Sum_probs=67.1
Q ss_pred ceEEEEeeCCeEEEEEEEEEecCeeEEeeeeeeeccccccChhHHHHHHHHHHHhhcCceEEEEcchhhhHHHhhhccCc
Q 001460 913 FYTAILERGDEIISAASIRFHGTQLAEMPFIGTRHIYRRQGMCRRLFCALESALCSLKVEKLIIPAIAELMHTWTRVFGF 992 (1074)
Q Consensus 913 FYT~VLe~~devVsaAsiRV~G~~~AElPlvAT~~~yRrQGmgR~Lv~aIE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF 992 (1074)
-+.+|++.+++|||++.+.-.+ +.+.|..|||.|+||+||+|+.||+.+++.+.. ..+++-+.+.++++|+ ++||
T Consensus 3 ~~~~~~~~~~~ivG~~~~~~~~-~~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~~~---~~i~l~~~~~~~~fY~-~~GF 77 (79)
T PF13508_consen 3 ERFFVAEDDGEIVGFIRLWPNE-DFAYIGYLAVDPEYRGKGIGSKLLNYLLEKAKS---KKIFLFTNPAAIKFYE-KLGF 77 (79)
T ss_dssp EEEEEEEETTEEEEEEEEEETT-TEEEEEEEEE-GGGTTSSHHHHHHHHHHHHHTC---SEEEEEEEHHHHHHHH-HTTE
T ss_pred cEEEEEEECCEEEEEEEEEEcC-CEEEEEEEEECHHHcCCCHHHHHHHHHHHHcCC---CcEEEEEcHHHHHHHH-HCcC
Confidence 4678899999999999997666 589999999999999999999999999888854 5567888899999999 6999
Q ss_pred EE
Q 001460 993 TS 994 (1074)
Q Consensus 993 ~~ 994 (1074)
++
T Consensus 78 ~~ 79 (79)
T PF13508_consen 78 EE 79 (79)
T ss_dssp EE
T ss_pred CC
Confidence 85
|
... |
| >PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2 | Back alignment and domain information |
|---|
| >KOG1512 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A | Back alignment and domain information |
|---|
| >COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >KOG0956 consensus PHD finger protein AF10 [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription] | Back alignment and domain information |
|---|
| >PRK07757 acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK10314 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
| >PTZ00330 acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK03624 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PLN02706 glucosamine 6-phosphate N-acetyltransferase | Back alignment and domain information |
|---|
| >PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B | Back alignment and domain information |
|---|
| >PRK07922 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
| >TIGR01575 rimI ribosomal-protein-alanine acetyltransferase | Back alignment and domain information |
|---|
| >cd02169 Citrate_lyase_ligase Citrate lyase ligase | Back alignment and domain information |
|---|
| >PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only] | Back alignment and domain information |
|---|
| >COG5141 PHD zinc finger-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4299 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PLN02825 amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
| >KOG1244 consensus Predicted transcription factor Requiem/NEURO-D4 [Transcription] | Back alignment and domain information |
|---|
| >TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase | Back alignment and domain information |
|---|
| >PRK10975 TDP-fucosamine acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase | Back alignment and domain information |
|---|
| >TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase | Back alignment and domain information |
|---|
| >PRK05279 N-acetylglutamate synthase; Validated | Back alignment and domain information |
|---|
| >TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase | Back alignment and domain information |
|---|
| >KOG1473 consensus Nucleosome remodeling factor, subunit NURF301/BPTF [Chromatin structure and dynamics; Transcription] | Back alignment and domain information |
|---|
| >KOG4443 consensus Putative transcription factor HALR/MLL3, involved in embryonic development [General function prediction only] | Back alignment and domain information |
|---|
| >PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional | Back alignment and domain information |
|---|
| >PHA00673 acetyltransferase domain containing protein | Back alignment and domain information |
|---|
| >PRK10140 putative acetyltransferase YhhY; Provisional | Back alignment and domain information |
|---|
| >PRK09831 putative acyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK13688 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
| >KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase | Back alignment and domain information |
|---|
| >KOG0954 consensus PHD finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate | Back alignment and domain information |
|---|
| >COG0456 RimI Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase | Back alignment and domain information |
|---|
| >KOG1512 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A | Back alignment and domain information |
|---|
| >smart00249 PHD PHD zinc finger | Back alignment and domain information |
|---|
| >TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103 | Back alignment and domain information |
|---|
| >KOG3139 consensus N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0825 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PRK01346 hypothetical protein; Provisional | Back alignment and domain information |
|---|
| >KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >PRK10514 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >KOG4299 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
| >PRK10562 putative acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >KOG0383 consensus Predicted helicase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK15130 spermidine N1-acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT) | Back alignment and domain information |
|---|
| >PHA01807 hypothetical protein | Back alignment and domain information |
|---|
| >KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase | Back alignment and domain information |
|---|
| >PF15446 zf-PHD-like: PHD/FYVE-zinc-finger like domain | Back alignment and domain information |
|---|
| >COG3393 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A | Back alignment and domain information |
|---|
| >TIGR01211 ELP3 histone acetyltransferase, ELP3 family | Back alignment and domain information |
|---|
| >COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A | Back alignment and domain information |
|---|
| >COG2153 ElaA Predicted acyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional | Back alignment and domain information |
|---|
| >PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B | Back alignment and domain information |
|---|
| >KOG0383 consensus Predicted helicase [General function prediction only] | Back alignment and domain information |
|---|
| >COG3153 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >cd04718 BAH_plant_2 BAH, or Bromo Adjacent Homology domain, plant-specific sub-family with unknown function | Back alignment and domain information |
|---|
| >PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2 | Back alignment and domain information |
|---|
| >COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >smart00249 PHD PHD zinc finger | Back alignment and domain information |
|---|
| >PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B | Back alignment and domain information |
|---|
| >PF00628 PHD: PHD-finger; InterPro: IPR019787 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule | Back alignment and domain information |
|---|
| >KOG0957 consensus PHD finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length | Back alignment and domain information |
|---|
| >KOG1245 consensus Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains) [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only] | Back alignment and domain information |
|---|
| >KOG0825 consensus PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >PF13831 PHD_2: PHD-finger; PDB: 2L43_A 2KU3_A | Back alignment and domain information |
|---|
| >KOG1973 consensus Chromatin remodeling protein, contains PHD Zn-finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG4323 consensus Polycomb-like PHD Zn-finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >KOG0957 consensus PHD finger protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG3053 CitC Citrate lyase synthetase [Energy production and conversion] | Back alignment and domain information |
|---|
| >COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
| >COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
| >KOG3397 consensus Acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A | Back alignment and domain information |
|---|
| >KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only] | Back alignment and domain information |
|---|
| >COG2388 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain | Back alignment and domain information |
|---|
| >KOG3138 consensus Predicted N-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only] | Back alignment and domain information |
|---|
| >COG5034 TNG2 Chromatin remodeling protein, contains PhD zinc finger [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
| >PF01429 MBD: Methyl-CpG binding domain; InterPro: IPR001739 Methylation at CpG dinucleotide, the most common DNA modification in eukaryotes, has been correlated with gene silencing associated with various phenomena such as genomic imprinting, transposon and chromosome X inactivation, differentiation, and cancer | Back alignment and domain information |
|---|
| >PF07227 DUF1423: Protein of unknown function (DUF1423); InterPro: IPR004082 A total of 715 potential protein-coding genes have been identified in the nucleotide sequence of Arabidopsis thaliana chromosome 5, with an average gene density of 1 gene per 4001 bp [] | Back alignment and domain information |
|---|
| >PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans | Back alignment and domain information |
|---|
| >KOG0955 consensus PHD finger protein BR140/LIN-49 [General function prediction only] | Back alignment and domain information |
|---|
| >KOG1245 consensus Chromatin remodeling complex WSTF-ISWI, large subunit (contains heterochromatin localization, PHD and BROMO domains) [Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics] | Back alignment and domain information |
|---|
| >cd01396 MeCP2_MBD MeCP2, MBD1, MBD2, MBD3, and MBD4 are members of a protein family that share the methyl-CpG-binding domain (MBD) | Back alignment and domain information |
|---|
| >COG3981 Predicted acetyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A Length = 61 | Back alignment and structure |
|---|
Score = 102 bits (256), Expect = 1e-26
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 712 DGDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQM--LPPGDWHCPNCTCKFC 765
G D + + C +C DGG+L+CCD CPS++H CL+ + +P G+W CP CTC
Sbjct: 3 LGSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCPAL 58
|
| >1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A Length = 66 | Back alignment and structure |
|---|
| >2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 56 | Back alignment and structure |
|---|
| >2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens} Length = 61 | Back alignment and structure |
|---|
| >1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 88 | Back alignment and structure |
|---|
| >2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens} Length = 60 | Back alignment and structure |
|---|
| >2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A Length = 142 | Back alignment and structure |
|---|
| >3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A Length = 129 | Back alignment and structure |
|---|
| >2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
| >2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens} Length = 111 | Back alignment and structure |
|---|
| >2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens} Length = 189 | Back alignment and structure |
|---|
| >2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens} Length = 88 | Back alignment and structure |
|---|
| >3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A Length = 184 | Back alignment and structure |
|---|
| >3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A* Length = 207 | Back alignment and structure |
|---|
| >2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens} Length = 71 | Back alignment and structure |
|---|
| >2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus} Length = 62 | Back alignment and structure |
|---|
| >3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A* Length = 159 | Back alignment and structure |
|---|
| >2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 92 | Back alignment and structure |
|---|
| >2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A* Length = 75 | Back alignment and structure |
|---|
| >3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A Length = 112 | Back alignment and structure |
|---|
| >3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A Length = 112 | Back alignment and structure |
|---|
| >1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2 Length = 51 | Back alignment and structure |
|---|
| >2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B* Length = 386 | Back alignment and structure |
|---|
| >2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A* Length = 60 | Back alignment and structure |
|---|
| >1x4i_A Inhibitor of growth protein 3; structural genomics, PHD domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70 | Back alignment and structure |
|---|
| >2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* Length = 114 | Back alignment and structure |
|---|
| >2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A* Length = 114 | Back alignment and structure |
|---|
| >2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 77 | Back alignment and structure |
|---|
| >2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 77 | Back alignment and structure |
|---|
| >3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens} Length = 77 | Back alignment and structure |
|---|
| >3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens} Length = 77 | Back alignment and structure |
|---|
| >1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A Length = 71 | Back alignment and structure |
|---|
| >1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2 Length = 91 | Back alignment and structure |
|---|
| >3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B Length = 70 | Back alignment and structure |
|---|
| >3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B Length = 70 | Back alignment and structure |
|---|
| >1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2 Length = 88 | Back alignment and structure |
|---|
| >1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Length = 64 | Back alignment and structure |
|---|
| >2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus} Length = 66 | Back alignment and structure |
|---|
| >3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A* Length = 59 | Back alignment and structure |
|---|
| >3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens} Length = 226 | Back alignment and structure |
|---|
| >3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens} Length = 226 | Back alignment and structure |
|---|
| >2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A* Length = 90 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2 Length = 76 | Back alignment and structure |
|---|
| >2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A* Length = 174 | Back alignment and structure |
|---|
| >3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens} Length = 68 | Back alignment and structure |
|---|
| >1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Length = 72 | Back alignment and structure |
|---|
| >2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A* Length = 52 | Back alignment and structure |
|---|
| >2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens} Length = 105 | Back alignment and structure |
|---|
| >3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens} Length = 52 | Back alignment and structure |
|---|
| >3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} Length = 75 | Back alignment and structure |
|---|
| >3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A Length = 183 | Back alignment and structure |
|---|
| >1qst_A TGCN5 histone acetyl transferase; GCN5-related N-acetyltransferase, COA binding protein; HET: EPE; 1.70A {Tetrahymena thermophila} SCOP: d.108.1.1 PDB: 1m1d_A* 1pu9_A* 1pua_A* 5gcn_A* 1qsr_A* 1q2d_A* 1q2c_A* 1qsn_A* Length = 160 | Back alignment and structure |
|---|
| >1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2 Length = 78 | Back alignment and structure |
|---|
| >3pur_A Lysine-specific demethylase 7 homolog; oxidoreductase-oxidoreductase inhibitor complex; HET: 2HG; 2.10A {Caenorhabditis elegans} PDB: 3n9l_A 3n9m_A* 3n9o_A* 3n9p_A* 3n9q_A* 3n9n_A* 3puq_A* Length = 528 | Back alignment and structure |
|---|
| >1z4r_A General control of amino acid synthesis protein 5-like 2; GCN5, acetyltransferase, SGC, structural genomics, structural genomics consortium; HET: ACO; 1.74A {Homo sapiens} SCOP: d.108.1.1 PDB: 1cm0_B* Length = 168 | Back alignment and structure |
|---|
| >2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A* Length = 65 | Back alignment and structure |
|---|
| >2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group} Length = 68 | Back alignment and structure |
|---|
| >1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2 Length = 79 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1074 | ||||
| d1mm2a_ | 61 | g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens | 2e-19 | |
| d1fp0a1 | 70 | g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF- | 4e-16 | |
| d1we9a_ | 64 | g.50.1.2 (A:) PHD finger protein At5g26210 {Thale | 2e-13 | |
| d1f62a_ | 51 | g.50.1.2 (A:) Williams-Beuren syndrome transcripti | 5e-13 | |
| d1wema_ | 76 | g.50.1.2 (A:) Death associated transcription facto | 8e-12 | |
| d1weea_ | 72 | g.50.1.2 (A:) PHD finger protein At1g33420 {Thale | 6e-11 | |
| d1wesa_ | 71 | g.50.1.2 (A:) PHD Inhibitor of growth protein 2, I | 2e-10 | |
| d1weva_ | 88 | g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus mu | 7e-10 | |
| d2pnxa1 | 51 | g.50.1.2 (A:195-245) Inhibitor of growth protein 4 | 9e-08 | |
| d1wewa_ | 78 | g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale c | 4e-06 | |
| d1wepa_ | 79 | g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus mus | 1e-05 | |
| d1vyxa_ | 60 | g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal do | 4e-05 |
| >d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} Length = 61 | Back information, alignment and structure |
|---|
class: Small proteins fold: FYVE/PHD zinc finger superfamily: FYVE/PHD zinc finger family: PHD domain domain: Mi2-beta (CHD4) species: Human (Homo sapiens) [TaxId: 9606]
Score = 81.1 bits (200), Expect = 2e-19
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 713 GDDPNDDTCGICGDGGDLICCDGCPSTFHQSCLDIQM--LPPGDWHCPNCTCK 763
G D + + C +C DGG+L+CCD CPS++H CL+ + +P G+W CP CTC
Sbjct: 4 GSDHHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56
|
| >d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} Length = 70 | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 64 | Back information, alignment and structure |
|---|
| >d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 76 | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 72 | Back information, alignment and structure |
|---|
| >d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 71 | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} Length = 88 | Back information, alignment and structure |
|---|
| >d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} Length = 51 | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 78 | Back information, alignment and structure |
|---|
| >d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} Length = 79 | Back information, alignment and structure |
|---|
| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} Length = 60 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1074 | |||
| d1z4ra1 | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.57 | |
| d1qsra_ | 162 | Catalytic domain of GCN5 histone acetyltransferase | 99.45 | |
| d1ygha_ | 164 | Catalytic domain of GCN5 histone acetyltransferase | 99.41 | |
| d1q2ya_ | 140 | Probable acetyltransferase YjcF {Bacillus subtilis | 99.18 | |
| d2jdca1 | 145 | Probable acetyltransferase YitI {Bacillus lichenif | 99.12 | |
| d1y9ka1 | 152 | IAA acetyltransferase {Bacillus cereus [TaxId: 139 | 98.99 | |
| d1y7ra1 | 133 | Hypothetical protein SA2161 {Staphylococcus aureus | 98.97 | |
| d1yvka1 | 152 | Hypothetical protein YvbK (BSu33890) {Bacillus sub | 98.97 | |
| d2atra1 | 137 | Probable acetyltransferase SP0256 {Streptococcus p | 98.94 | |
| d1yx0a1 | 151 | Hypothetical protein YsnE {Bacillus subtilis [TaxI | 98.87 | |
| d2fiwa1 | 156 | Probable N-acetyltransferase RPA1999 {Rhodopseudom | 98.86 | |
| d1y9wa1 | 140 | Probable acetyltransferase BC2806 {Bacillus cereus | 98.85 | |
| d1xeba_ | 149 | Hypothetical protein PA0115 {Pseudomonas aeruginos | 98.81 | |
| d1n71a_ | 180 | Aminoglycoside 6'-N-acetyltransferase {Enterococcu | 98.78 | |
| d1mm2a_ | 61 | Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 | 98.75 | |
| d2g3aa1 | 137 | Probable acetyltransferase Atu2258 {Agrobacterium | 98.74 | |
| d1i12a_ | 157 | Glucosamine-phosphate N-acetyltransferase GNA1 {Ba | 98.69 | |
| d1ghea_ | 170 | Tabtoxin resistance protein {Pseudomonas syringae | 98.68 | |
| d1fp0a1 | 70 | Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo | 98.66 | |
| d2gana1 | 182 | Hypothetical protein PH0736 {Pyrococcus horikoshii | 98.66 | |
| d2fe7a1 | 156 | Probable N-acetyltransferase PA0478 {Pseudomonas a | 98.63 | |
| d1u6ma_ | 189 | Putative acetyltransferase EF0945 {Enterococcus fa | 98.59 | |
| d1vkca_ | 149 | Putative acetyltransferase PF0028 {Pyrococcus furi | 98.58 | |
| d1s3za_ | 147 | Aminoglycoside N-acetyltransferase AAC(6')-IY {Sal | 98.58 | |
| d2fiaa1 | 157 | Probable acetyltransferase EF1919 {Enterococcus fa | 98.56 | |
| d1tiqa_ | 173 | Protease synthase and sporulation negative regulat | 98.54 | |
| d1mk4a_ | 157 | Hypothetical protein YqiY {Bacillus subtilis [TaxI | 98.51 | |
| d2ozga2 | 283 | Putative acetyltransferase Ava4977 {Anabaena varia | 98.49 | |
| d2fl4a1 | 146 | Probable spermine/spermidine acetyltransferase EF1 | 98.48 | |
| d1z4ea1 | 150 | Transcriptional regulator BH1968 {Bacillus halodur | 98.45 | |
| d1m4ia_ | 181 | Aminoglycoside 2'-N-acetyltransferase {Mycobacteri | 98.41 | |
| d2hv2a2 | 285 | Hypothetical protein EF1021 {Enterococcus faecalis | 98.4 | |
| d1cjwa_ | 166 | Serotonin N-acetyltranferase {Sheep (Ovis aries) [ | 98.4 | |
| d2cy2a1 | 174 | Probable acetyltransferase TTHA1209 {Thermus therm | 98.37 | |
| d2i6ca1 | 160 | Putative acetyltransferase PA4794 {Pseudomonas aer | 98.37 | |
| d1yr0a1 | 163 | Phosphinothricin acetyltransferase {Agrobacterium | 98.35 | |
| d1ufha_ | 155 | Putative acetyltransferase YycN {Bacillus subtilis | 98.33 | |
| d1vhsa_ | 165 | Putative phosphinothricin acetyltransferase YwnH { | 98.29 | |
| d1wwza1 | 157 | Hypothetical protein PH1933 {Pyrococcus horikoshii | 98.29 | |
| d2i00a2 | 291 | Putative acetyltransferase EF2353 {Enterococcus fa | 98.28 | |
| d2ae6a1 | 161 | Putative acetyltransferase EF0244 {Enterococcus fa | 98.26 | |
| d1yvoa1 | 169 | Hypothetical protein PA4866 {Pseudomonas aeruginos | 98.25 | |
| d2euia1 | 153 | Probable acetyltransferase PA4026 {Pseudomonas aer | 98.23 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 98.17 | |
| d2b5ga1 | 167 | Diamine acetyltransferase 1 {Human (Homo sapiens) | 98.13 | |
| d1bo4a_ | 137 | Aminoglycoside 3-N-acetyltransferase {Serratia mar | 98.12 | |
| d2beia1 | 167 | Diamine acetyltransferase 2 {Human (Homo sapiens) | 98.09 | |
| d1qsma_ | 150 | Histone acetyltransferase HPA2 {Baker's yeast (Sac | 98.04 | |
| d2ge3a1 | 164 | Probable acetyltransferase Atu2290 {Agrobacterium | 98.03 | |
| d1sqha_ | 297 | Hypothetical protein cg14615-pa {Fruit fly (Drosop | 97.95 | |
| d2aj6a1 | 118 | Hypothetical protein MW0638 {Staphylococcus aureus | 97.95 | |
| d1f62a_ | 51 | Williams-Beuren syndrome transcription factor, WST | 97.89 | |
| d1weva_ | 88 | PHD finger protein 22 {Mouse (Mus musculus) [TaxId | 97.89 | |
| d1r57a_ | 102 | Hypothetical protein SA2309 {Staphylococcus aureus | 97.83 | |
| d1wesa_ | 71 | PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu | 97.69 | |
| d1yrea1 | 183 | Hypothetical protein PA3270 {Pseudomonas aeruginos | 97.23 | |
| d1nsla_ | 180 | Probable acetyltransferase YdaF {Bacillus subtilis | 97.19 | |
| d1ro5a_ | 197 | Autoinducer synthesis protein LasI {Pseudomonas ae | 97.12 | |
| d1s7ka1 | 174 | L7/L12-Ribosomal-protein-serine acetyltransferase | 97.05 | |
| d2pnxa1 | 51 | Inhibitor of growth protein 4, Ing4 {Homo sapiens | 96.95 | |
| d1weea_ | 72 | PHD finger protein At1g33420 {Thale cress (Arabido | 96.94 | |
| d1we9a_ | 64 | PHD finger protein At5g26210 {Thale cress (Arabido | 96.9 | |
| d2fcka1 | 178 | Putative ribosomal-protein-serine acetyltransferas | 96.71 | |
| d1p0ha_ | 308 | Mycothiol synthase MshD {Mycobacterium tuberculosi | 96.67 | |
| d1f62a_ | 51 | Williams-Beuren syndrome transcription factor, WST | 96.41 | |
| d1yk3a1 | 198 | Hypothetical protein Rv1347c/MT1389 {Mycobacterium | 96.38 | |
| d1wepa_ | 79 | PHD finger protein 8 {Mouse (Mus musculus) [TaxId: | 96.24 | |
| d1wema_ | 76 | Death associated transcription factor 1, Datf1 (DI | 96.23 | |
| d1weva_ | 88 | PHD finger protein 22 {Mouse (Mus musculus) [TaxId | 96.16 | |
| d1fp0a1 | 70 | Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo | 95.74 | |
| d1mm2a_ | 61 | Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606 | 95.46 | |
| d2fsra1 | 164 | Probable acetyltranferase Atu2435 {Agrobacterium t | 94.75 | |
| d1weea_ | 72 | PHD finger protein At1g33420 {Thale cress (Arabido | 94.41 | |
| d1wewa_ | 78 | Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop | 94.25 | |
| d1wepa_ | 79 | PHD finger protein 8 {Mouse (Mus musculus) [TaxId: | 92.92 | |
| d1we9a_ | 64 | PHD finger protein At5g26210 {Thale cress (Arabido | 92.87 | |
| d1kzfa_ | 210 | Acyl-homoserinelactone synthase EsaI {Pantoea stew | 91.93 | |
| d1wema_ | 76 | Death associated transcription factor 1, Datf1 (DI | 90.95 | |
| d1wila_ | 89 | Hypothetical protein KIAA1045 {Human (Homo sapiens | 89.99 | |
| d1wesa_ | 71 | PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mu | 88.48 | |
| d1ig4a_ | 75 | Methylation-dependent transcriptional repressor MB | 84.32 | |
| d1wewa_ | 78 | Sumoylation ligase E3, SIZ1 {Thale cress (Arabidop | 81.87 |
| >d1z4ra1 d.108.1.1 (A:497-658) Catalytic domain of GCN5 histone acetyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a+b) fold: Acyl-CoA N-acyltransferases (Nat) superfamily: Acyl-CoA N-acyltransferases (Nat) family: N-acetyl transferase, NAT domain: Catalytic domain of GCN5 histone acetyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.57 E-value=2.4e-14 Score=112.55 Aligned_cols=138 Identities=14% Similarity=0.144 Sum_probs=108.7
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCEEEEEEECCEEEEEEEEEEE-CCEEEEEEEEEEEC
Q ss_conf 24577853200256323467787520112112588886334574269998329948899999873-67037865434413
Q 001460 869 KLAVALNVMDECFLPIVDRRSGINLIHNVLYNSGSNFNRLNYSGFYTAILERGDEIISAASIRFH-GTQLAEMPFIGTRH 947 (1074)
Q Consensus 869 KLAvALsIl~ECF~PIvD~rSGiDLIpdvVYN~GSnfkRLdF~GfYt~VLe~~~eiVsaAsiRV~-G~~~AElPlvAT~~ 947 (1074)
.|..+..+|...| +....+.|+.++|+ ....++|+..+++||++++++.+ ..++|||.++||.+
T Consensus 23 ~L~~~~~iF~~~l-----p~m~~~yi~r~~~d----------~~~~~~v~~~~~~iIG~i~~~~~~~~~~aeI~~laV~~ 87 (162)
T d1z4ra1 23 WLVGLQNVFSHQL-----PRMPKEYIARLVFD----------PKHKTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTS 87 (162)
T ss_dssp HHHHHHHHHHHHC-----TTSCHHHHHHHHTC----------TTCEEEEEEETTEEEEEEEEEEETTTTEEEEEEEEECG
T ss_pred HHHHHHHHHHHHC-----CCCCHHHHHHHHCC----------CCCEEEEEEECCEEEEEEEEEEECCCCEEEEEEEEECH
T ss_conf 9999899998767-----89739999999659----------88469999999999999999997889989999999980
Q ss_pred CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHCCCCEECCHHHHHHHHCCCEEEECCCCEEEECCCC
Q ss_conf 3125681499999999997525941999836042699856124817755888985420452320684200110222
Q 001460 948 IYRRQGMCRRLFCALESALCSLKVEKLIIPAIAELMHTWTRVFGFTSLEESLKQEMRSLNMLVFPGIDMLQKLLLE 1023 (1074)
Q Consensus 948 ~yRrQGmgR~Lv~aIE~~L~~LgVe~LvlpA~~ea~~~Wt~kFGF~~i~~~~k~~~~~~~ll~FpGt~~LqK~L~~ 1023 (1074)
+||+||+|+.||+.+++.++..|+..+++.|...|++||. |+||+.-.......|..+ +-.+.|.++||=.|.+
T Consensus 88 ~~qgkGiG~~Lm~~l~~~~~~~g~~~i~~~~~~~A~~fY~-k~GF~~~~~~~~~~~~~~-ikdy~~~~lm~~~~~p 161 (162)
T d1z4ra1 88 NEQVKGYGTHLMNHLKEYHIKHNILYFLTYADEYAIGYFK-KQGFSKDIKVPKSRYLGY-IKDYEGATLMECELNP 161 (162)
T ss_dssp GGCSSSHHHHHHHHHHHHHHHTTCCEEEEEECGGGHHHHH-HTTEESCCCSCHHHHTTT-SCCCTTCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHH-HCCCEEECCCCHHHHCCC-CCCCCCEEEEEEECCC
T ss_conf 3655258999999999999877986999925841677898-579867233766676287-6688983999986479
|
| >d1qsra_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Tetrahymena thermophila [TaxId: 5911]} | Back information, alignment and structure |
|---|
| >d1ygha_ d.108.1.1 (A:) Catalytic domain of GCN5 histone acetyltransferase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1q2ya_ d.108.1.1 (A:) Probable acetyltransferase YjcF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2jdca1 d.108.1.1 (A:2-146) Probable acetyltransferase YitI {Bacillus licheniformis [TaxId: 1402]} | Back information, alignment and structure |
|---|
| >d1y9ka1 d.108.1.1 (A:1-152) IAA acetyltransferase {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1y7ra1 d.108.1.1 (A:1-133) Hypothetical protein SA2161 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1yvka1 d.108.1.1 (A:5-156) Hypothetical protein YvbK (BSu33890) {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2atra1 d.108.1.1 (A:1-137) Probable acetyltransferase SP0256 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
| >d1yx0a1 d.108.1.1 (A:1-151) Hypothetical protein YsnE {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2fiwa1 d.108.1.1 (A:2-157) Probable N-acetyltransferase RPA1999 {Rhodopseudomonas palustris [TaxId: 1076]} | Back information, alignment and structure |
|---|
| >d1y9wa1 d.108.1.1 (A:1-140) Probable acetyltransferase BC2806 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
| >d1xeba_ d.108.1.1 (A:) Hypothetical protein PA0115 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1n71a_ d.108.1.1 (A:) Aminoglycoside 6'-N-acetyltransferase {Enterococcus faecium [TaxId: 1352]} | Back information, alignment and structure |
|---|
| >d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2g3aa1 d.108.1.1 (A:1-137) Probable acetyltransferase Atu2258 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1i12a_ d.108.1.1 (A:) Glucosamine-phosphate N-acetyltransferase GNA1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d1ghea_ d.108.1.1 (A:) Tabtoxin resistance protein {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
| >d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2gana1 d.108.1.1 (A:1-182) Hypothetical protein PH0736 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d2fe7a1 d.108.1.1 (A:3-158) Probable N-acetyltransferase PA0478 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1u6ma_ d.108.1.1 (A:) Putative acetyltransferase EF0945 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1vkca_ d.108.1.1 (A:) Putative acetyltransferase PF0028 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
| >d1s3za_ d.108.1.1 (A:) Aminoglycoside N-acetyltransferase AAC(6')-IY {Salmonella enteritidis [TaxId: 149539]} | Back information, alignment and structure |
|---|
| >d2fiaa1 d.108.1.1 (A:1-157) Probable acetyltransferase EF1919 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1tiqa_ d.108.1.1 (A:) Protease synthase and sporulation negative regulatory protein PaiA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1mk4a_ d.108.1.1 (A:) Hypothetical protein YqiY {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d2ozga2 d.108.1.10 (A:8-290) Putative acetyltransferase Ava4977 {Anabaena variabilis [TaxId: 1172]} | Back information, alignment and structure |
|---|
| >d2fl4a1 d.108.1.1 (A:1-146) Probable spermine/spermidine acetyltransferase EF1086 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1z4ea1 d.108.1.1 (A:4-153) Transcriptional regulator BH1968 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
| >d1m4ia_ d.108.1.1 (A:) Aminoglycoside 2'-N-acetyltransferase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2hv2a2 d.108.1.10 (A:2-286) Hypothetical protein EF1021 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1cjwa_ d.108.1.1 (A:) Serotonin N-acetyltranferase {Sheep (Ovis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
| >d2cy2a1 d.108.1.1 (A:1-174) Probable acetyltransferase TTHA1209 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
| >d2i6ca1 d.108.1.1 (A:1001-1160) Putative acetyltransferase PA4794 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1yr0a1 d.108.1.1 (A:4-166) Phosphinothricin acetyltransferase {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1ufha_ d.108.1.1 (A:) Putative acetyltransferase YycN {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1vhsa_ d.108.1.1 (A:) Putative phosphinothricin acetyltransferase YwnH {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1wwza1 d.108.1.1 (A:1-157) Hypothetical protein PH1933 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
| >d2i00a2 d.108.1.10 (A:10-300) Putative acetyltransferase EF2353 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d2ae6a1 d.108.1.1 (A:1-161) Putative acetyltransferase EF0244 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
| >d1yvoa1 d.108.1.1 (A:4-172) Hypothetical protein PA4866 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d2euia1 d.108.1.1 (A:1-153) Probable acetyltransferase PA4026 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d2b5ga1 d.108.1.1 (A:3-169) Diamine acetyltransferase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1bo4a_ d.108.1.1 (A:) Aminoglycoside 3-N-acetyltransferase {Serratia marcescens [TaxId: 615]} | Back information, alignment and structure |
|---|
| >d2beia1 d.108.1.1 (A:3-169) Diamine acetyltransferase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1qsma_ d.108.1.1 (A:) Histone acetyltransferase HPA2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
| >d2ge3a1 d.108.1.1 (A:6-169) Probable acetyltransferase Atu2290 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1sqha_ d.108.1.5 (A:) Hypothetical protein cg14615-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
| >d2aj6a1 d.108.1.1 (A:1-118) Hypothetical protein MW0638 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1r57a_ d.108.1.1 (A:) Hypothetical protein SA2309 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
| >d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1yrea1 d.108.1.1 (A:11-193) Hypothetical protein PA3270 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1nsla_ d.108.1.1 (A:) Probable acetyltransferase YdaF {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1ro5a_ d.108.1.3 (A:) Autoinducer synthesis protein LasI {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
| >d1s7ka1 d.108.1.1 (A:3-176) L7/L12-Ribosomal-protein-serine acetyltransferase RimL {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
| >d2pnxa1 g.50.1.2 (A:195-245) Inhibitor of growth protein 4, Ing4 {Homo sapiens [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d2fcka1 d.108.1.1 (A:1-178) Putative ribosomal-protein-serine acetyltransferase VC1889 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
| >d1p0ha_ d.108.1.1 (A:) Mycothiol synthase MshD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1yk3a1 d.108.1.1 (A:10-207) Hypothetical protein Rv1347c/MT1389 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
| >d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2fsra1 d.108.1.1 (A:4-167) Probable acetyltranferase Atu2435 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
| >d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
| >d1kzfa_ d.108.1.3 (A:) Acyl-homoserinelactone synthase EsaI {Pantoea stewartii subsp. stewartii [TaxId: 66271]} | Back information, alignment and structure |
|---|
| >d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ig4a_ d.10.1.3 (A:) Methylation-dependent transcriptional repressor MBD1/PCM1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|