Citrus Sinensis ID: 001488

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050------1060------107
MSSDSDEDELLQMALKEQAQRRVVYDTPQPRKPVTNYVQQPKSAATQKGGRSQGKKYEEEEESEVEMLSISSGDEEVSRDRGLAAKNRARGRRDDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR
ccccccHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccHHHHHHcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHccccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHHHcHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHccccccccccccccccccccccccccccccccccccccccccc
ccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccHEEEEEEcccccccccccccccccccccccHcccccccccccccccccHHHHHHHHHHHHHccccHHHHHHcccccccccccccccccccccccccccccccccccccEEEEcccccccccHHHHccccHHHHHccccccccccHHHHHHHHcccccHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHcccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHccccccHcHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEccccccccccccccHcHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccHHHHEEEEHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHccccccEEEEEEHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHcccccccccccccccHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHccccccccccccccccccccccccccccccccccccccccccc
MSSDSDEDELLQMALKEQAQrrvvydtpqprkpvtnyvqqpksaatqkggrsqgkkyeeeeESEVEMLSIssgdeevsrdrglaaknrargrrdddgtwdgdepncwkrvDEAELARRVREMREtrtapvaqkyekkpsmaagikgfstlqsfprgmecidplglgiidnktlrlitdssgstpksdrdnvdNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRieedpegsgtAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTlfnlpstirgsiskgEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKsmedphidltnLENTVRLLLElepesdpvwhYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDlnqssgadysvtcgniqpidslpvelsgeevDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAkaeekvgegkysiHSLDEVAGMIRNTISVYEIKVhntfndledsnILRSYMRDAIEEISKACQAfeakesapPVAVMVLRTLQAEITKIYIGRLcswmqgstdgiskdetwipvsilernkspytisylPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELaqnksnkesqhlqngyssdpcteslsdipgsvvdphqRLLIVISNIGYCKDELSSELYNKYKDIWLQsrekdqegtdiQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLdsgvqwgaapavkGVRDVAVELLHTLVAVHAEVFagakplldKTLGILVEGLIDTFLSLFdenqsnnlksldaNGFCQLMLELDYFEtilnpyftHDARESLKNLQGVLLEKATVSVAEAvenpghhrrptrgsedALADErqqgmtvspDDLIALAQQYSSELLQAELERTRIntacfveslpldsvpesakvaygfrgsmdpsgrnypamdspsrnyrnaqptgspsfarhrrr
MSSDSDEDELLQMALkeqaqrrvvydtpqprkpvtnyvqqpksaatqkggrsqgkkyeeeeesevemlsissgdeevsrdrglaaknrargrrdddgtwdgdepncwkrvdeaelarrvremretrtapvaqkyekkpsmaagIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRlitdssgstpksdrdnvDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKqlvkdnfdcfvsCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLfnlpstirgsiskGEFDLAVREYKKaksialpshvNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNiqpidslpvelSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKAeekvgegkysihsldEVAGMIRNTISVYEIKVhntfndledsnILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSIlernkspytISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEavenpghhrrptrgsedALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFveslpldsvpESAKVAYGfrgsmdpsgrNYPAMdspsrnyrnaqptgspsfarhrrr
MSSDSDEDELLQMALKEQAQRRVVYDTPQPRKPVTNYVQQPKSAATQKGGRSQGKKYeeeeesevemlsissGDEEVSRDRGLAAKNRArgrrdddgtwdgdEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR
***********************************************************************************************************************************************IKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLI**********************LMYFSDSFNAKLFLSRVH***********ALAL***********KQLVKDNFDCFVSCKTTIDDIE******************F**************************IRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSL********DMYAQLLEIQESVRLSFLNRFLDFAGHLEHIA**********************************VVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQS*******TDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSV***********************************LIALAQQYSSELLQAELERTRINTACFVESLPLD**************************************************
*****DE*ELLQMAL******************************************************************************************************************************************************G************************************SDSFNAKLFLSRVHQNTSSADLEAGALALK************LVKDNFDCFVSCKTTIDDIE************************V*************************GMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYK**E*******NLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARME**************************************************EEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFS************************GMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFE**********MVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSIL*****PYTISYLPLAFRSIMKSSMDQISLMIH******************IQESVRLSFLNRFLDFAGHLEHI************************************VDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKA**************************************DLIALAQQ*****************************************************************************
**********LQMALKEQAQRRVVYDTPQPRKPVT***********************************************LAAK**********GTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLITDS***********VDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQN********************SLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVE******************ERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSP*********************
********ELLQMALKEQAQRRVVYD************************************SEVE**********************************GDEPNCWKRVDEAELARRVREMRETRT****QK**************STL*SFPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQ*Q*************************VELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFA*************HSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASE*******************************SVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKA*********************************TVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPL***************************************************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MSSDSDEDELLQMALKEQAQRRVVYDTPQPRKPVTNYVQQPKSAATQKGGRSQGKKYEEEEESEVEMLSISSGDEEVSRDRGLAAKNRARGRRDDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIALPSHxxxxxxxxxxxxxxxxxxxxxLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1068 2.2.26 [Sep-21-2011]
Q8S3U91090 Exocyst complex component yes no 0.979 0.959 0.668 0.0
O54921924 Exocyst complex component yes no 0.644 0.744 0.233 2e-32
Q96KP1924 Exocyst complex component yes no 0.640 0.740 0.231 2e-32
Q9D4H1924 Exocyst complex component yes no 0.639 0.739 0.234 3e-32
Q54VX5 1095 Exocyst complex component yes no 0.214 0.209 0.280 2e-28
Q22706884 Exocyst complex component yes no 0.294 0.356 0.207 7e-18
Q9VQQ9894 Exocyst complex component yes no 0.248 0.296 0.233 9e-12
Q4V9Y0760 Vacuolar protein sorting- no no 0.181 0.255 0.24 4e-10
P89102971 Exocyst complex component yes no 0.246 0.270 0.212 2e-08
Q505L3757 Vacuolar protein sorting- N/A no 0.181 0.256 0.23 7e-08
>sp|Q8S3U9|EXOC2_ARATH Exocyst complex component 2 OS=Arabidopsis thaliana GN=SEC5A PE=1 SV=1 Back     alignment and function desciption
 Score = 1489 bits (3856), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 743/1112 (66%), Positives = 876/1112 (78%), Gaps = 66/1112 (5%)

Query: 1    MSSDS---DEDELLQMALKEQAQRRVVYDTP---QPRKPVTNYVQQPKSAATQKGGRS-- 52
            MSSDS   DEDELLQMALKEQA+R + Y  P     RKPV N VQQP+         +  
Sbjct: 1    MSSDSNDLDEDELLQMALKEQAKRDLTYQKPPSSSARKPVANLVQQPRQQKPVAAAAAPP 60

Query: 53   -------QGKKYEEEEESEVEMLSISSGDEEVSRDRGLA-------------AKNRARGR 92
                   +    +E+EESEVE+LSISSGD+++ R+R +               + + R R
Sbjct: 61   KKSAAAVRKPSMDEDEESEVELLSISSGDDDLEREREIGGSSGGAGRGRGSDVREKGRAR 120

Query: 93   RDDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQS 152
            ++DDG WDG EP+CWKRV+EAELARRVR+MRE+RTAPV QK E K          ++LQS
Sbjct: 121  KEDDGAWDGGEPDCWKRVNEAELARRVRDMRESRTAPVVQKVEGKAPAPGKKVALTSLQS 180

Query: 153  FPRGMECIDPLGLGIIDNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFL 212
             PRGMECIDPL LGIIDNKTLRLIT+SSGS  K+++  VDN+LREKL+YFSD F+ KLFL
Sbjct: 181  LPRGMECIDPLKLGIIDNKTLRLITESSGSPSKAEK--VDNTLREKLVYFSDHFDPKLFL 238

Query: 213  SRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEE 272
            SR+HQ+T++ADLEAGAL LK+DLKGR  QRKQLVKDNFDCFVSCKTTIDDIESKLKRIEE
Sbjct: 239  SRIHQDTTAADLEAGALGLKSDLKGRNLQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEE 298

Query: 273  DPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRG 332
            DPEGSGT HLF  M+ V+S+AN AFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPS IR 
Sbjct: 299  DPEGSGTTHLFNCMKSVTSRANLAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSIIRS 358

Query: 333  SISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTN 392
            SISKGE+DLAVREYKKAKSIALPSHVNILKRVLEEVEKVM EFK  LYKSMEDP ID T+
Sbjct: 359  SISKGEYDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMLEFKGTLYKSMEDPKIDFTS 418

Query: 393  LENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDAR 452
            LENTVRLLLELEPESDPVWHYLNVQNHRI GL EKCT DHEAR+E L N+ HE+A+SDA+
Sbjct: 419  LENTVRLLLELEPESDPVWHYLNVQNHRIHGLLEKCTYDHEARVEILRNDTHEKAISDAK 478

Query: 453  WLQIQQDLNQSSGADYSVTC----GNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHH 508
            W QIQQ+     G  YS T      N   +D   VE   EE+D  +GRYI+RLTAVL+HH
Sbjct: 479  WQQIQQN-----GVSYSDTASSNENNAVQVDLQSVEFPSEEIDILKGRYIKRLTAVLVHH 533

Query: 509  IPAFWKVALSVFSGKFA-----------KAEEKVGEGKYSIHSLDEVAGMIRNTISVYEI 557
            IP FWK A+S+FSGKFA           KAEEKV E +YS HSL+EVAGMIR TISVYE 
Sbjct: 534  IPVFWKTAISIFSGKFAKSSQVTDTSANKAEEKVTEARYSTHSLEEVAGMIRKTISVYEA 593

Query: 558  KVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIG 617
            KV++TF D ++S ILR +M DAI E+SKACQAFEAKES P  AV+ LR +QAEITKIYI 
Sbjct: 594  KVNSTFCDFDESCILRPFMSDAINEVSKACQAFEAKESTPHSAVVALRKIQAEITKIYIQ 653

Query: 618  RLCSWMQGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLR 677
            RLCSWM+ ST+GISK+ETWIPVSILERN+SPY ISYLPLAFRS++ S M+Q++LMI S++
Sbjct: 654  RLCSWMRASTEGISKEETWIPVSILERNRSPYAISYLPLAFRSVIVSGMEQVNLMILSVK 713

Query: 678  SEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSS 737
            SEA KSEDM+AQ+ EI  SVRL+FLN FLDFA HLE I ++L+Q+ S ++  + +NGYS 
Sbjct: 714  SEAAKSEDMFAQIEEIIISVRLAFLNCFLDFAAHLEQIGADLSQSTSRQD--NWKNGYSD 771

Query: 738  DPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDI 797
            +   E  ++  GSV+DPH+RLL+V+SNIGYCKDEL+SELYNK+K  WLQSR+K+++ +D+
Sbjct: 772  EHQEEPSANTYGSVIDPHRRLLMVLSNIGYCKDELASELYNKFKYTWLQSRDKNEDSSDL 831

Query: 798  QDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHT 857
            QDL+MSFSGL EKVLE YTFAKANLIRTAAT +LLDSG+QWG+AP VKG+RD AVELLHT
Sbjct: 832  QDLIMSFSGLGEKVLEHYTFAKANLIRTAATNYLLDSGIQWGSAPQVKGIRDAAVELLHT 891

Query: 858  LVAVHAEVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDY 917
            LVAVHAEVFAGAKPLLDK LG+L+EGLIDTFLS+ +EN+S++L+S+DANGFCQLM EL+Y
Sbjct: 892  LVAVHAEVFAGAKPLLDKILGVLIEGLIDTFLSVVEENRSSDLRSIDANGFCQLMFELEY 951

Query: 918  FETILNPYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQG 977
            FET+L  YFT  A ESLK+LQG +LE A  S++EAVE PGH+RRPTRGSED ++D++Q  
Sbjct: 952  FETVLYSYFTSAATESLKSLQGTVLEIAIESISEAVETPGHNRRPTRGSEDTVSDDKQ-- 1009

Query: 978  MTVSPDDLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAY-GFRGSMDP 1036
             +VS DDL+AL +Q S+ELLQ ELERTR+NTACF ES PL+S P   K  Y  FRGS   
Sbjct: 1010 -SVSADDLLALTKQCSNELLQQELERTRVNTACFAESAPLESTPPLPKATYSSFRGS--- 1065

Query: 1037 SGRNYPAMDSPSRNYRNAQPTGSPSFARHRRR 1068
                   MDSPSRNYR +Q +GSP  AR RRR
Sbjct: 1066 -------MDSPSRNYRGSQSSGSPINARPRRR 1090
Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
Arabidopsis thaliana (taxid: 3702)
>sp|O54921|EXOC2_RAT Exocyst complex component 2 OS=Rattus norvegicus GN=Exoc2 PE=1 SV=1 Back     alignment and function description
>sp|Q96KP1|EXOC2_HUMAN Exocyst complex component 2 OS=Homo sapiens GN=EXOC2 PE=1 SV=1 Back     alignment and function description
>sp|Q9D4H1|EXOC2_MOUSE Exocyst complex component 2 OS=Mus musculus GN=Exoc2 PE=1 SV=1 Back     alignment and function description
>sp|Q54VX5|EXOC2_DICDI Exocyst complex component 2 OS=Dictyostelium discoideum GN=exoc2 PE=3 SV=1 Back     alignment and function description
>sp|Q22706|EXOC2_CAEEL Exocyst complex component 2 OS=Caenorhabditis elegans GN=sec-5 PE=3 SV=1 Back     alignment and function description
>sp|Q9VQQ9|EXOC2_DROME Exocyst complex component 2 OS=Drosophila melanogaster GN=sec5 PE=2 SV=1 Back     alignment and function description
>sp|Q4V9Y0|VPS51_XENTR Vacuolar protein sorting-associated protein 51 homolog OS=Xenopus tropicalis GN=vps51 PE=2 SV=1 Back     alignment and function description
>sp|P89102|SEC5_YEAST Exocyst complex component SEC5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SEC5 PE=1 SV=1 Back     alignment and function description
>sp|Q505L3|VPS51_XENLA Vacuolar protein sorting-associated protein 51 homolog OS=Xenopus laevis GN=vps51 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1068
2240667011101 predicted protein [Populus trichocarpa] 0.996 0.966 0.782 0.0
2555833441094 Exocyst complex component, putative [Ric 0.965 0.942 0.771 0.0
2960811711096 unnamed protein product [Vitis vinifera] 0.985 0.960 0.740 0.0
3594931091095 PREDICTED: LOW QUALITY PROTEIN: exocyst 0.970 0.946 0.745 0.0
3565357131085 PREDICTED: exocyst complex component 2-l 0.985 0.970 0.698 0.0
4494438341089 PREDICTED: exocyst complex component 2-l 0.972 0.954 0.708 0.0
3565761431087 PREDICTED: exocyst complex component 2-l 0.985 0.968 0.700 0.0
2978395531089 hypothetical protein ARALYDRAFT_476843 [ 0.982 0.963 0.674 0.0
223306751090 exocyst complex component 2 [Arabidopsis 0.979 0.959 0.668 0.0
2978450961085 hypothetical protein ARALYDRAFT_889573 [ 0.982 0.966 0.674 0.0
>gi|224066701|ref|XP_002302182.1| predicted protein [Populus trichocarpa] gi|222843908|gb|EEE81455.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
 Score = 1683 bits (4358), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 865/1105 (78%), Positives = 954/1105 (86%), Gaps = 41/1105 (3%)

Query: 1    MSSDSD-EDELLQMALKEQAQRRVVYDTP--QPRKPVTNYVQQPKSA------ATQKGGR 51
            MSSDSD EDELLQMALKEQ+QR + Y  P    RKPV N+VQQP+        A  K   
Sbjct: 1    MSSDSDDEDELLQMALKEQSQRDLNYQRPPSNQRKPVVNFVQQPRQPPPPQRPAPTKNMA 60

Query: 52   SQGKK---YEEEEESEVEMLSISSGDEEVSRDRGLAAKNRARGRRDDDGT-------WDG 101
            +Q K     E++++SEVEMLSISSGDEEVS+DRG      ARGR             WDG
Sbjct: 61   NQTKSRIAVEDDDDSEVEMLSISSGDEEVSKDRGGGGGAAARGRGGRGAGGREEERGWDG 120

Query: 102  DEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIKGFSTLQSFPRGMECID 161
            +EP+CWKRVDEAELARRVR+MRE+RTAPVAQK+E+KPS A   KG +TLQSFPRGMECID
Sbjct: 121  EEPDCWKRVDEAELARRVRDMRESRTAPVAQKFERKPS-ALARKGLNTLQSFPRGMECID 179

Query: 162  PLGLGIIDNKTLRLITDSSGSTPKS-DRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTS 220
            PLGLGIIDNK+LRLITDSS S+P   DRD++DN LREKL+YFS++F+AKLFLSR+HQ+TS
Sbjct: 180  PLGLGIIDNKSLRLITDSSESSPSKSDRDHLDNILREKLLYFSENFDAKLFLSRIHQDTS 239

Query: 221  SADLEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTA 280
            +A+LEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKL+RIEEDPEGSGT+
Sbjct: 240  AAELEAGALALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLRRIEEDPEGSGTS 299

Query: 281  HLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFD 340
            HL+  MQGVSS ANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSI KGE+D
Sbjct: 300  HLYNCMQGVSSLANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSIGKGEYD 359

Query: 341  LAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLL 400
            LAVREYKKAKSIALPSHVNILKRVLEEVEKVM EFK  LYKSMEDP IDLTNLENTVRLL
Sbjct: 360  LAVREYKKAKSIALPSHVNILKRVLEEVEKVMNEFKGTLYKSMEDPQIDLTNLENTVRLL 419

Query: 401  LELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDL 460
            LELEPESDPVWHYLNVQNHRIRGL EKCTLDHEARMETLHNE+ ERA+SDA+W QIQQ+L
Sbjct: 420  LELEPESDPVWHYLNVQNHRIRGLLEKCTLDHEARMETLHNEMRERALSDAKWRQIQQNL 479

Query: 461  NQSSGADYSVTCGNIQP-IDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSV 519
            NQSS  D+S+  GNI P +DS PV+LSGEEVDA RG+YIRRLTAVL HHIPAFWKVALSV
Sbjct: 480  NQSSDVDHSLMMGNIPPPVDSQPVDLSGEEVDALRGKYIRRLTAVLTHHIPAFWKVALSV 539

Query: 520  FSGKFAKA----------------EEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTF 563
            FSGKFAK+                EEKVG+G+YS HSLDEVAGMIR TIS YE KVHNTF
Sbjct: 540  FSGKFAKSSQVSAESNVNASATKSEEKVGDGRYSAHSLDEVAGMIRGTISAYETKVHNTF 599

Query: 564  NDLEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWM 623
            +DLE+SNIL+SYM DAI+EISKACQAFE KESAPP AVM LRTLQAEITKIYI RLCSWM
Sbjct: 600  HDLEESNILQSYMSDAIKEISKACQAFEVKESAPPTAVMALRTLQAEITKIYIIRLCSWM 659

Query: 624  QGSTDGISKDETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKS 683
            +  T+ ISK+ETWIPVSILERNKSPYTIS+LPLAFRS++ S+MDQIS MI SLRSEA +S
Sbjct: 660  RAMTEEISKEETWIPVSILERNKSPYTISFLPLAFRSVIASAMDQISQMIQSLRSEAGRS 719

Query: 684  EDMYAQLLEIQESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTES 743
            EDM+A L EIQESVRL+FLN FLDFAGHLE I SELAQNKS+KES HLQNGYS +   + 
Sbjct: 720  EDMFALLQEIQESVRLAFLNCFLDFAGHLEQIGSELAQNKSSKESLHLQNGYSHESEEKL 779

Query: 744  LSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMS 803
             S++ GSVVD HQ+LL+V+SNIG+CKDELS EL+NKYK IWLQSREKD+EG+DIQDLVMS
Sbjct: 780  SSNLQGSVVDSHQQLLLVLSNIGFCKDELSYELFNKYKTIWLQSREKDEEGSDIQDLVMS 839

Query: 804  FSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHA 863
            FSGLEEKVL QYTFAKANLIRTAA  +LL+SGVQWGAAPAVKGVRD AVELLHTLVAVH+
Sbjct: 840  FSGLEEKVLAQYTFAKANLIRTAAMNYLLNSGVQWGAAPAVKGVRDAAVELLHTLVAVHS 899

Query: 864  EVFAGAKPLLDKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILN 923
            EVFAGAKPLLDKTLGILVEGLIDTFLSLF EN+S +L+SLDANGFCQLMLEL+YFETILN
Sbjct: 900  EVFAGAKPLLDKTLGILVEGLIDTFLSLFHENKSKDLRSLDANGFCQLMLELEYFETILN 959

Query: 924  PYFTHDARESLKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPD 983
            PY T DARESLK+LQGVLLEKAT +V EAVENPGH RRPTRGSEDALAD+R QGM VSPD
Sbjct: 960  PYLTPDARESLKSLQGVLLEKATENVTEAVENPGHQRRPTRGSEDALADDRLQGMAVSPD 1019

Query: 984  DLIALAQQYSSELLQAELERTRINTACFVESLPLDSVPESAKVAYGFRGSMDPSGRNYPA 1043
            DLIALA+Q SSELLQ+ELERTRINTACF+ES+PLDSVPESAK AY +RGSMD S R+Y  
Sbjct: 1020 DLIALAEQCSSELLQSELERTRINTACFIESIPLDSVPESAKAAYAYRGSMD-SPRSY-- 1076

Query: 1044 MDSPSRNYRNAQPTGSPSFARHRRR 1068
            MDSP RNYR +Q  GSP F+RHRRR
Sbjct: 1077 MDSPGRNYRGSQAMGSPGFSRHRRR 1101

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255583344|ref|XP_002532433.1| Exocyst complex component, putative [Ricinus communis] gi|223527853|gb|EEF29948.1| Exocyst complex component, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296081171|emb|CBI18197.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|359493109|ref|XP_002269025.2| PREDICTED: LOW QUALITY PROTEIN: exocyst complex component 2 [Vitis vinifera] Back     alignment and taxonomy information
>gi|356535713|ref|XP_003536388.1| PREDICTED: exocyst complex component 2-like [Glycine max] Back     alignment and taxonomy information
>gi|449443834|ref|XP_004139681.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] gi|449503239|ref|XP_004161903.1| PREDICTED: exocyst complex component 2-like [Cucumis sativus] Back     alignment and taxonomy information
>gi|356576143|ref|XP_003556193.1| PREDICTED: exocyst complex component 2-like [Glycine max] Back     alignment and taxonomy information
>gi|297839553|ref|XP_002887658.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] gi|297333499|gb|EFH63917.1| hypothetical protein ARALYDRAFT_476843 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|22330675|ref|NP_177811.2| exocyst complex component 2 [Arabidopsis thaliana] gi|24638217|sp|Q8S3U9.1|EXOC2_ARATH RecName: Full=Exocyst complex component 2; AltName: Full=Exocyst complex component Sec5 gi|19387170|gb|AAL87121.1|AF479278_1 SEC5a [Arabidopsis thaliana] gi|26452107|dbj|BAC43143.1| unknown protein [Arabidopsis thaliana] gi|29029068|gb|AAO64913.1| At1g76850 [Arabidopsis thaliana] gi|332197774|gb|AEE35895.1| exocyst complex component 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|297845096|ref|XP_002890429.1| hypothetical protein ARALYDRAFT_889573 [Arabidopsis lyrata subsp. lyrata] gi|297336271|gb|EFH66688.1| hypothetical protein ARALYDRAFT_889573 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1068
TAIR|locus:20300561090 SEC5A "AT1G76850" [Arabidopsis 0.978 0.958 0.647 0.0
TAIR|locus:21995521090 SEC5B "AT1G21170" [Arabidopsis 0.914 0.896 0.688 0.0
MGI|MGI:1913732924 Exoc2 "exocyst complex compone 0.304 0.351 0.266 1.6e-35
UNIPROTKB|F1P2A7925 EXOC2 "Uncharacterized protein 0.657 0.758 0.232 3.1e-35
RGD|619961924 Exoc2 "exocyst complex compone 0.300 0.347 0.263 3.4e-35
UNIPROTKB|O54921924 Exoc2 "Exocyst complex compone 0.300 0.347 0.263 3.4e-35
UNIPROTKB|E1BDW9924 EXOC2 "Uncharacterized protein 0.295 0.341 0.267 1.1e-33
UNIPROTKB|F1RXP8924 EXOC2 "Uncharacterized protein 0.298 0.345 0.275 1.6e-33
UNIPROTKB|Q96KP1924 EXOC2 "Exocyst complex compone 0.297 0.344 0.273 1.8e-33
DICTYBASE|DDB_G0280081 1095 exoc2 "exocyst complex subunit 0.214 0.209 0.284 6.1e-32
TAIR|locus:2030056 SEC5A "AT1G76850" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3458 (1222.3 bits), Expect = 0., Sum P(2) = 0.
 Identities = 710/1096 (64%), Positives = 840/1096 (76%)

Query:     1 MSSDSDEDELLQMALKEQAQRRVVYDTPQPR--KPVTNYVQQPK--SAATQKGGRSQGKK 56
             +   +  D   Q      A++ V     QPR  KPV      PK  +AA +K    + ++
Sbjct:    18 LKEQAKRDLTYQKPPSSSARKPVANLVQQPRQQKPVAAAAAPPKKSAAAVRKPSMDEDEE 77

Query:    57 YXXXXXXXXXXXXXXXGDEEVS-------RDRGLAAKNRAXXXXXXXXXXXXXEPNCWKR 109
                              + E+        R RG   + +              EP+CWKR
Sbjct:    78 SEVELLSISSGDDDLEREREIGGSSGGAGRGRGSDVREKGRARKEDDGAWDGGEPDCWKR 137

Query:   110 VDEAELARRVREMRETRTAPVAQKYEKKPSMAAGIK-GFSTLQSFPRGMECIDPLGLGII 168
             V+EAELARRVR+MRE+RTAPV QK E K + A G K   ++LQS PRGMECIDPL LGII
Sbjct:   138 VNEAELARRVRDMRESRTAPVVQKVEGK-APAPGKKVALTSLQSLPRGMECIDPLKLGII 196

Query:   169 DNKTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGA 228
             DNKTLRLIT+SSGS  K+++  VDN+LREKL+YFSD F+ KLFLSR+HQ+T++ADLEAGA
Sbjct:   197 DNKTLRLITESSGSPSKAEK--VDNTLREKLVYFSDHFDPKLFLSRIHQDTTAADLEAGA 254

Query:   229 LALKTDLKGRTQQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQG 288
             L LK+DLKGR  QRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGT HLF  M+ 
Sbjct:   255 LGLKSDLKGRNLQRKQLVKDNFDCFVSCKTTIDDIESKLKRIEEDPEGSGTTHLFNCMKS 314

Query:   289 VSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKK 348
             V+S+AN AFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPS IR SISKGE+DLAVREYKK
Sbjct:   315 VTSRANLAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSIIRSSISKGEYDLAVREYKK 374

Query:   349 AKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESD 408
             AKSIALPSHVNILKRVLEEVEKVM EFK  LYKSMEDP ID T+LENTVRLLLELEPESD
Sbjct:   375 AKSIALPSHVNILKRVLEEVEKVMLEFKGTLYKSMEDPKIDFTSLENTVRLLLELEPESD 434

Query:   409 PVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADY 468
             PVWHYLNVQNHRI GL EKCT DHEAR+E L N+ HE+A+SDA+W QIQQ+     G  Y
Sbjct:   435 PVWHYLNVQNHRIHGLLEKCTYDHEARVEILRNDTHEKAISDAKWQQIQQN-----GVSY 489

Query:   469 SVTCG----NIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKF 524
             S T      N   +D   VE   EE+D  +GRYI+RLTAVL+HHIP FWK A+S+FSGKF
Sbjct:   490 SDTASSNENNAVQVDLQSVEFPSEEIDILKGRYIKRLTAVLVHHIPVFWKTAISIFSGKF 549

Query:   525 AK-----------AEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFNDLEDSNILR 573
             AK           AEEKV E +YS HSL+EVAGMIR TISVYE KV++TF D ++S ILR
Sbjct:   550 AKSSQVTDTSANKAEEKVTEARYSTHSLEEVAGMIRKTISVYEAKVNSTFCDFDESCILR 609

Query:   574 SYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGISKD 633
              +M DAI E+SKACQAFEAKES P  AV+ LR +QAEITKIYI RLCSWM+ ST+GISK+
Sbjct:   610 PFMSDAINEVSKACQAFEAKESTPHSAVVALRKIQAEITKIYIQRLCSWMRASTEGISKE 669

Query:   634 ETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEI 693
             ETWIPVSILERN+SPY ISYLPLAFRS++ S M+Q++LMI S++SEA KSEDM+AQ+ EI
Sbjct:   670 ETWIPVSILERNRSPYAISYLPLAFRSVIVSGMEQVNLMILSVKSEAAKSEDMFAQIEEI 729

Query:   694 QESVRLSFLNRFLDFAGHLEHIASELAQNKSNKESQHLQNGYSSDPCTESLSDIPGSVVD 753
               SVRL+FLN FLDFA HLE I ++L+Q+ S +++   +NGYS +   E  ++  GSV+D
Sbjct:   730 IISVRLAFLNCFLDFAAHLEQIGADLSQSTSRQDNW--KNGYSDEHQEEPSANTYGSVID 787

Query:   754 PHQRLLIVISNIGYCKDELSSELYNKYKDIWLQSREKDQEGTDIQDLVMSFSGLEEKVLE 813
             PH+RLL+V+SNIGYCKDEL+SELYNK+K  WLQSR+K+++ +D+QDL+MSFSGL EKVLE
Sbjct:   788 PHRRLLMVLSNIGYCKDELASELYNKFKYTWLQSRDKNEDSSDLQDLIMSFSGLGEKVLE 847

Query:   814 QYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFAGAKPLL 873
              YTFAKANLIRTAAT +LLDSG+QWG+AP VKG+RD AVELLHTLVAVHAEVFAGAKPLL
Sbjct:   848 HYTFAKANLIRTAATNYLLDSGIQWGSAPQVKGIRDAAVELLHTLVAVHAEVFAGAKPLL 907

Query:   874 DKTLGILVEGLIDTFLSLFDENQSNNLKSLDANGFCQLMLELDYFETILNPYFTHDARES 933
             DK LG+L+EGLIDTFLS+ +EN+S++L+S+DANGFCQLM EL+YFET+L  YFT  A ES
Sbjct:   908 DKILGVLIEGLIDTFLSVVEENRSSDLRSIDANGFCQLMFELEYFETVLYSYFTSAATES 967

Query:   934 LKNLQGVLLEKATVSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYS 993
             LK+LQG +LE A  S++EAVE PGH+RRPTRGSED ++D++Q   +VS DDL+AL +Q S
Sbjct:   968 LKSLQGTVLEIAIESISEAVETPGHNRRPTRGSEDTVSDDKQ---SVSADDLLALTKQCS 1024

Query:   994 SELLQAELERTRINTACFVESLPLDSVPESAKVAYG-FRGSMDPSGRNYPAMDSPSRNYR 1052
             +ELLQ ELERTR+NTACF ES PL+S P   K  Y  FRGSMD          SPSRNYR
Sbjct:  1025 NELLQQELERTRVNTACFAESAPLESTPPLPKATYSSFRGSMD----------SPSRNYR 1074

Query:  1053 NAQPTGSPSFARHRRR 1068
              +Q +GSP  AR RRR
Sbjct:  1075 GSQSSGSPINARPRRR 1090
GO:0003674 "molecular_function" evidence=ND
GO:0005886 "plasma membrane" evidence=IDA
GO:0005829 "cytosol" evidence=IDA
GO:0009846 "pollen germination" evidence=IGI
GO:0009860 "pollen tube growth" evidence=IGI
GO:0009506 "plasmodesma" evidence=IDA
GO:0007155 "cell adhesion" evidence=RCA
GO:0010090 "trichome morphogenesis" evidence=RCA
GO:0045010 "actin nucleation" evidence=RCA
GO:0048765 "root hair cell differentiation" evidence=RCA
GO:0071555 "cell wall organization" evidence=RCA
TAIR|locus:2199552 SEC5B "AT1G21170" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
MGI|MGI:1913732 Exoc2 "exocyst complex component 2" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
UNIPROTKB|F1P2A7 EXOC2 "Uncharacterized protein" [Gallus gallus (taxid:9031)] Back     alignment and assigned GO terms
RGD|619961 Exoc2 "exocyst complex component 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|O54921 Exoc2 "Exocyst complex component 2" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|E1BDW9 EXOC2 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F1RXP8 EXOC2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] Back     alignment and assigned GO terms
UNIPROTKB|Q96KP1 EXOC2 "Exocyst complex component 2" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0280081 exoc2 "exocyst complex subunit 2" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8S3U9EXOC2_ARATHNo assigned EC number0.66810.97940.9596yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
fgenesh4_pm.C_LG_II000319
hypothetical protein (1101 aa)
(Populus trichocarpa)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1068
KOG2347934 consensus Sec5 subunit of exocyst complex [Intrace 100.0
KOG2346636 consensus Uncharacterized conserved protein [Funct 100.0
PF15469182 Sec5: Exocyst complex component Sec5 100.0
PF04124338 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 99.53
KOG2069581 consensus Golgi transport complex subunit [Intrace 99.04
PF0870087 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT te 98.86
KOG2033863 consensus Low density lipoprotein B-like protein [ 98.56
PF10475291 DUF2450: Protein of unknown function N-terminal do 98.27
KOG2176800 consensus Exocyst complex, subunit SEC15 [Intracel 98.11
PF04100383 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007 97.79
PF06248593 Zw10: Centromere/kinetochore Zw10; InterPro: IPR00 97.68
KOG2307705 consensus Low density lipoprotein receptor [Intrac 97.55
PF10392132 COG5: Golgi transport complex subunit 5; InterPro: 97.21
PF04091311 Sec15: Exocyst complex subunit Sec15-like ; InterP 97.08
PF06148133 COG2: COG (conserved oligomeric Golgi) complex com 96.52
PF10191766 COG7: Golgi complex component 7 (COG7); InterPro: 96.03
PF04048142 Sec8_exocyst: Sec8 exocyst complex component speci 95.71
KOG3691982 consensus Exocyst complex subunit Sec8 [Intracellu 95.22
KOG2180793 consensus Late Golgi protein sorting complex, subu 95.12
PF04437494 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR00 94.55
PF06046566 Sec6: Exocyst complex component Sec6; InterPro: IP 89.17
>KOG2347 consensus Sec5 subunit of exocyst complex [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=4.1e-125  Score=1103.93  Aligned_cols=890  Identities=42%  Similarity=0.612  Sum_probs=727.3

Q ss_pred             CCCCCcccccCCCCCc-------cccCCCCCCCCCcccccccceeeecccCCccccchh---------hhhhh-cccCCc
Q 001488           30 PRKPVTNYVQQPKSAA-------TQKGGRSQGKKYEEEEESEVEMLSISSGDEEVSRDR---------GLAAK-NRARGR   92 (1068)
Q Consensus        30 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~-~~~~~~   92 (1068)
                      .++||.+++|||++..       |+.+..-+++.+. +|+|+|++|+|+++||+.++.+         +++++ .+|+++
T Consensus         2 ~~np~~~~~q~p~vtg~s~~e~~p~t~~~ir~e~l~-~~~sd~~~l~i~g~D~lls~~~~s~~~~~~~~g~a~~~~G~~r   80 (934)
T KOG2347|consen    2 TRNPVARLAQQPRVTGLSPNEGGPGTAVTIRKEFLG-NDESDVIGLSICGGDELLSAERKSPNGIIARVGLAKREKGDIR   80 (934)
T ss_pred             CCCchhhccCCccccCCCCCCCCCCcceeecCCccC-cchhhHhhhhhcccchhhhhhcCCCCccccccccccCCCCceE
Confidence            4789999999877662       2222355667777 9999999999999999877664         23233 278888


Q ss_pred             cCCCCCCCCCCCCccccccHHHHHHHHHHhhhccCcccccccccccchhhcc-cccccccccCCCCCCCCCCCCCc-cch
Q 001488           93 RDDDGTWDGDEPNCWKRVDEAELARRVREMRETRTAPVAQKYEKKPSMAAGI-KGFSTLQSFPRGMECIDPLGLGI-IDN  170 (1068)
Q Consensus        93 ~~~~~~~~~~~p~~w~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~DPLGl~~-~~~  170 (1068)
                      ..++..|+|-.|.+|.+|+.+++.  +++|+..+..|  ++++.++. ...+ ++...+|..|+.+...+|+-..+ ++.
T Consensus        81 ~~~~~~~~g~s~~~f~r~~~~qi~--~l~~s~~~~d~--~~~~~~~~-~~~~~~~~t~l~~~~~l~~~i~~~k~~~~~d~  155 (934)
T KOG2347|consen   81 VTTLSGGKGTSTVCFRRVNHEQIG--PLDESAVRVDE--QQDQRKVP-GRLKGVALTSLQSEPPLGECIEPLKLKINEDN  155 (934)
T ss_pred             EeeccCccccCchhhhhhhHhhhc--cchhhhhhccc--cccccccc-ccccccCCcccccCCCcccccCchhhcchhhh
Confidence            899999999999999999999998  99999999888  66666544 3322 37777777777677777776544 333


Q ss_pred             hhhhhhcccCCCCCCCCcCCCCchhhcccCCCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHhhh
Q 001488          171 KTLRLITDSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNTSSADLEAGALALKTDLKGRTQQRKQLVKDNF  250 (1068)
Q Consensus       171 ~~L~~~~~~~~~~P~~~~~~~~p~lr~~~disS~~FdP~~FLs~vH~~tS~~dL~~gl~~L~r~I~~~~~~LK~LV~eNf  250 (1068)
                      +                  .++|..  .+||.+++|+|+|||.++|+++||+||+.|...|++..+..++.-+.||++||
T Consensus       156 ~------------------~lfp~~--~~Dl~se~Fspkw~L~enH~~ts~edLk~~i~~lK~~~n~~~~~~~~lvK~n~  215 (934)
T KOG2347|consen  156 K------------------TLFPIT--SVDLRSEHFSPKWFLLENHQDTSFEDLKAGILNLKRDLNGRKEGSLQLVKDNF  215 (934)
T ss_pred             h------------------hhcccc--ccccccccCChhHHHHhhhhhccHHHHHHHHHHHHHhhcchhhhhHHHHhcch
Confidence            3                  345554  57899999999999999999999999999999999999999999999999999


Q ss_pred             hhhHhhhhhHHHHHHHhhhhcCCCCCCCchhHHhhHHHHHHHHHhhhhhHHHhHHHHHHHHHHHHHHHHHHHHhcCchhh
Q 001488          251 DCFVSCKTTIDDIESKLKRIEEDPEGSGTAHLFKLMQGVSSQANRAFEPLFERQAQAEKIRSVQGMLQRFRTLFNLPSTI  330 (1068)
Q Consensus       251 ~kFI~akdTId~m~~~~k~~e~~~~~~~t~~L~~~L~~i~~~a~~i~~pLler~~KaekLr~vl~~L~R~kfLFeLP~~L  330 (1068)
                      +.||.|++|+++|+.++++.+.+..+++|.+|.+.|+++.+.|+.+|.+|++|++|||++|+++++|+||+|||+||+++
T Consensus       216 ~~fi~~~dtl~~i~~kLe~~e~~~~gs~t~~l~n~i~~~~s~ad~iF~~vl~Rk~~ADstRsvL~~lqRfkfLFnLp~~i  295 (934)
T KOG2347|consen  216 DSFISCKDTLDNIHQKLERGEEDPHGSGTTKLENCIKNSTSRADLIFEDVLERKDKADSTRSVLGVLQRFKFLFNLPSNI  295 (934)
T ss_pred             hHHHHHHHHHHHHHHHHhccccCccchHHHHHHHHHHHhhhHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHhcchhh
Confidence            99999999999999999998888899999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhhcCChHHHHHHHHHhhhhccCcchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCChhHHHHHHHHHhcCCCCCChH
Q 001488          331 RGSISKGEFDLAVREYKKAKSIALPSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPV  410 (1068)
Q Consensus       331 ~~~I~~gdYe~aV~dY~kAk~L~~~~~v~vf~kV~~EVE~ii~~~k~~L~~~L~~~~~s~ee~~~lI~lLleL~~~~dPi  410 (1068)
                      +++|++|+|+.+|++|+|||+++.+++|++|+++++|||..|+.||..|+++|.+++.+.++++++|++|.+|++++||+
T Consensus       296 er~i~kGeYd~vvndYekAKsl~~~t~v~~Fkk~l~Eve~~m~~~k~~l~~kli~~p~t~~dq~~~ir~L~~L~~~~dP~  375 (934)
T KOG2347|consen  296 ERSIKKGEYDTVVNDYEKAKSLFGKTEVNLFKKVLEEVEKRMQSFKETLYRKLIDTPITFEDQSKLIRYLSELEPESDPV  375 (934)
T ss_pred             hhHhhcCCceeeccchhhHHHhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHhCcccCch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHhhhccCCCcccccccCCCCCCCCCCCCCChhhH
Q 001488          411 WHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGADYSVTCGNIQPIDSLPVELSGEEV  490 (1068)
Q Consensus       411 w~~L~sq~~~I~~~le~~~~~~~~r~e~l~~~l~~~~~s~~~~~~l~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~ev  490 (1068)
                      |+||..|++||..+++.|...|+++++.++       .++ +|.+.+++....|.-+.....+ .-  .. ....++.+.
T Consensus       376 wq~I~~q~k~i~~L~~s~~~~~~~~l~~~~-------~~~-~~~q~s~~g~~~S~t~s~~~~~-~~--q~-~~~~~~~~k  443 (934)
T KOG2347|consen  376 WQCIGVQNKRILGLLESCWDDHVARLEGLR-------LSD-KWTQPSQNGVHLSDTASSMENS-QN--QV-INEWKIREK  443 (934)
T ss_pred             hhhccccchHHHhhhhhcchhHHHHhhccc-------ccc-cccchhhcccccCchHHHHhhh-hh--hh-ccchhhhhh
Confidence            999999999999999999999999999875       133 5665554442211111111111 00  10 112334455


Q ss_pred             HHHHHHHHHHHHHHHHhhchHHHHHHHHhhcC-ccccccccccCCccccCCHHHHHHHHHHHHHHHHHHhhhhcCC----
Q 001488          491 DAFRGRYIRRLTAVLIHHIPAFWKVALSVFSG-KFAKAEEKVGEGKYSIHSLDEVAGMIRNTISVYEIKVHNTFND----  565 (1068)
Q Consensus       491 ~~l~~~fi~~Lt~vil~~lp~FWklaqs~~~G-k~~k~~e~~~~~~~s~~~~~e~~~mi~e~i~~y~~~vs~~F~~----  565 (1068)
                      ...++.||++||+++++++|.|||+|++||+| .|..... .........-.+.++.|++++....+.+....|+.    
T Consensus       444 ~~~r~~fiekL~~l~~s~lP~fWKl~~sy~~G~~~~~~sq-~~~s~~~k~~qn~~~~~~~~v~~sLv~~~~~~~~t~s~~  522 (934)
T KOG2347|consen  444 TPERVNFIEKLTDLLLSQLPIFWKLAISYFNGDLFSPSSQ-VQDSDINKMEQNNEVREKREVFHSLVELALMDRFTLSQS  522 (934)
T ss_pred             chHHHHHHHHHHHHHHHhCcHHHHHHHHHhcccccCcccc-cChhHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhh
Confidence            56788999999999999999999999999999 4433220 00000111112244556655554444333322222    


Q ss_pred             ----------CCCCccchHHHHHHHHHHHHHHHhhccccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc---c
Q 001488          566 ----------LEDSNILRSYMRDAIEEISKACQAFEAKESAPPVAVMVLRTLQAEITKIYIGRLCSWMQGSTDGIS---K  632 (1068)
Q Consensus       566 ----------l~~~n~~~~yL~~~L~~v~~~~~sL~~~~~~p~~~~~~L~~L~~~~r~~~v~~lca~~~~~ae~i~---~  632 (1068)
                                .|......|||+.+++.|+.+|++|+....+|..+++.|+.|+.+   .++.|+|+|++..+|.|+   .
T Consensus       523 ~~~a~~~~~~~dis~~~~~~~~~~i~~vr~~~~sL~ale~~P~~~lq~Iq~li~~---~rl~~~~~~~~~~~e~is~l~~  599 (934)
T KOG2347|consen  523 DGKAKSPFGDADISRSLLPWMPLAIKTVRKACQSLEALESLPHDALQPIQKLITE---ARLQCLSSWMRASTERISTLAK  599 (934)
T ss_pred             cccccCCcCCcccccccCccchhHHHHhHHHHHHHHHhhhChHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHh
Confidence                      222222237999999999999999999555998888888888777   788889999999999999   7


Q ss_pred             ccccccccccccCCCCCccccchHHHHHHHHHHHHHHHHHHhhcccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHhH
Q 001488          633 DETWIPVSILERNKSPYTISYLPLAFRSIMKSSMDQISLMIHSLRSEATKSEDMYAQLLEIQESVRLSFLNRFLDFAGHL  712 (1068)
Q Consensus       633 lEDW~~~~~~e~~~~~~~iT~LP~~Fe~~i~s~mqki~~~l~~~~~E~~~~~dv~~~l~~~~~~Vr~~F~~~~~af~~~L  712 (1068)
                      .|+|+++...+|+   .++|+||.+||++|+++|+.+..++.+..+|..    +|. ...|+++|...+++...+|..|+
T Consensus       600 re~W~~~s~~~rn---~s~t~LP~~fEt~ivssl~q~~~~~l~~~gEa~----~f~-~~~~~~~i~el~I~~~~~fl~c~  671 (934)
T KOG2347|consen  600 RETWIPDSILERN---RSITYLPLAFETVIVSSLEQVNSVLLSFEGEAA----LFE-QPDMQAEIEELSISVRLAFLNCF  671 (934)
T ss_pred             hhccccchhhhcc---cchhhhhHHHHHHHhhhHHhhhhHHhhcccccc----ccC-chHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999777876   569999999999999999999999877777665    333 25666667777777777777777


Q ss_pred             HHHhhhhhhccCCccccc-----cccCCCCCCCCCCcCCCCCCCCCCCceeeeeecchhHHHhhhHHHHHHHHHhhcccc
Q 001488          713 EHIASELAQNKSNKESQH-----LQNGYSSDPCTESLSDIPGSVVDPHQRLLIVISNIGYCKDELSSELYNKYKDIWLQS  787 (1068)
Q Consensus       713 e~la~~~~~~~~~~e~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~RLLltLSN~~~lr~~viP~L~~~fe~~f~~~  787 (1068)
                      |+++.-.++-. -+.+..     .++++....++.++.+.+..+++|++|||+||||++||+...+|+|.+.|+.-|--.
T Consensus       672 e~L~~h~~~~~-~~~~q~~t~~~~~~~~~~~~qed~~~ns~~~~~~~~qrlLi~LsN~~yc~~~~~~~l~n~fk~~~~~~  750 (934)
T KOG2347|consen  672 EDLAIHLEQIG-ADLSQLTTQIEGQNGFSNAHQEDISINSADSVVDPEQRLLIVLSNIGYCKDILAPTLLNIFKYTWLLS  750 (934)
T ss_pred             HHhhhcccccC-CchhhcccccccccccccccchhhhcccccccCChhheeEEEeccHHHHHHHHHHHHHHHHHHHhhcc
Confidence            77775111100 111111     133444444444555566778899999999999999999999999999996655443


Q ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHHHhhhHhHHHHHHhhhhcCCCCCCCCCCCCccchHHHHHHHHHHHHHHHHhh
Q 001488          788 REKDQEGTDIQDLVMSFSGLEEKVLEQYTFAKANLIRTAATTFLLDSGVQWGAAPAVKGVRDVAVELLHTLVAVHAEVFA  867 (1068)
Q Consensus       788 ~~l~~~~~~i~~v~~~l~qLd~rLfe~Y~~~Ka~~L~~~I~~gil~~g~dW~~~~~P~~VRpYv~E~Ll~LV~VHAEV~t  867 (1068)
                      .      +-+.+....|++|+.+||+.||+.|+++|+++++||||.+||+|..+|+|++||+|++|+|++||+||||||+
T Consensus       751 ~------k~iE~is~s~s~l~s~l~e~Yi~~k~~~i~~alEp~~~~~~~~W~~~~~~~~irdYa~E~l~~lV~VhaEvf~  824 (934)
T KOG2347|consen  751 R------KNIEDISMSLSGLGSKLFENYIEDKADPIRGALEPYLLDGGIQWGMAPPVKGIRDYAKEALHNLVAVHAEVFA  824 (934)
T ss_pred             c------ccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccchhhccccccccCCCccchHHHHHHHHHHHHHHHHHHHh
Confidence            2      2333445689999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cchhhHHHHHHHHHHHHHHHHHHhhhhhcccc-ccccCchhhHHHHhhHHHHHHhhcccCChhHHHHHHHHHHHHHHHHH
Q 001488          868 GAKPLLDKTLGILVEGLIDTFLSLFDENQSNN-LKSLDANGFCQLMLELDYFETILNPYFTHDARESLKNLQGVLLEKAT  946 (1068)
Q Consensus       868 ia~~Lv~rvLs~Lve~vaeelL~~F~~~~~~~-v~~fs~~G~lQAtLDIefl~qtLs~Y~T~~A~~~~~~l~~~~~~~a~  946 (1068)
                      ++|+|+++||..+++.++++|+++|+     | |++|+.+|.+|+++|||||+++|+.|.|+.|++.|++        |.
T Consensus       825 iap~Ll~kiL~~~ve~i~d~L~~l~~-----~~v~s~S~nG~lQi~vdl~~l~~~l~~Ylt~~a~~slkq--------al  891 (934)
T KOG2347|consen  825 IAPQLLDKILGETVEGISDELLRLFS-----CDVQSFSANGALQIMVDLEYLEDVLGPYLTKDAKESLKQ--------AL  891 (934)
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHHHhh-----hhhhccCCCcceeeeeeHHHHHHHHHHhccHHHHHHHHH--------HH
Confidence            99999999999999999999999998     6 9999999999999999999999999999999999995        88


Q ss_pred             hHHHhhhcCCCCCCCCCCCCchhhhhhhcCCCCCChHHHHHHHHHHHHHHHHHHHhhhhcch
Q 001488          947 VSVAEAVENPGHHRRPTRGSEDALADERQQGMTVSPDDLIALAQQYSSELLQAELERTRINT 1008 (1068)
Q Consensus       947 e~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1008 (1068)
                      |.+++.+.+     +++|+.++...+++++         ..|+.||.     .++++||+|+
T Consensus       892 e~l~~~~~g-----~dtr~lee~ln~~k~s---------m~l~Lqc~-----~a~~~t~~~t  934 (934)
T KOG2347|consen  892 EALSECLSG-----GDTRRLEECLNDDKQS---------MRLQLQCF-----QALEDTRFNT  934 (934)
T ss_pred             HHhhhhccC-----cchhhHHHHHHHhhHH---------HHHHHHHH-----HHhhhhhcCC
Confidence            888888888     5999999999999998         67899996     7899999985

>KOG2346 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PF15469 Sec5: Exocyst complex component Sec5 Back     alignment and domain information
>PF04124 Dor1: Dor1-like family ; InterPro: IPR007255 Dor1 is involved in vesicle targeting to the yeast Golgi apparatus and complexes with a number of other trafficking proteins, which include Sec34 and Sec35 [] Back     alignment and domain information
>KOG2069 consensus Golgi transport complex subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF08700 Vps51: Vps51/Vps67; InterPro: IPR014812 The VFT tethering complex (also known as GARP complex, Golgi associated retrograde protein complex, Vps53 tethering complex) is a conserved eukaryotic docking complex which is involved in recycling of proteins from endosomes to the late Golgi Back     alignment and domain information
>KOG2033 consensus Low density lipoprotein B-like protein [Lipid transport and metabolism] Back     alignment and domain information
>PF10475 DUF2450: Protein of unknown function N-terminal domain (DUF2450) ; InterPro: IPR019515 This entry represents Vacuolar protein sorting-associated protein 54, and is thought to be involved in retrograde transport from early and late endosomes to late Golgi found in eukaryotes, but its function is not known Back     alignment and domain information
>KOG2176 consensus Exocyst complex, subunit SEC15 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04100 Vps53_N: Vps53-like, N-terminal ; InterPro: IPR007234 Vps53 complexes with Vps52 and Vps54 to form a multi-subunit complex involved in regulating membrane trafficking events [] Back     alignment and domain information
>PF06248 Zw10: Centromere/kinetochore Zw10; InterPro: IPR009361 Zeste white 10 (ZW10) was initially identified as a mitotic checkpoint protein involved in chromosome segregation, and then implicated in targeting cytoplasmic dynein and dynactin to mitotic kinetochores, but it is also important in non-dividing cells Back     alignment and domain information
>KOG2307 consensus Low density lipoprotein receptor [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10392 COG5: Golgi transport complex subunit 5; InterPro: IPR019465 The conserved oligomeric Golgi (COG) complex is a peripheral membrane complex involved in intra-Golgi protein trafficking Back     alignment and domain information
>PF04091 Sec15: Exocyst complex subunit Sec15-like ; InterPro: IPR007225 Sec15 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>PF06148 COG2: COG (conserved oligomeric Golgi) complex component, COG2; InterPro: IPR024602 This entry represents the uncharacterised N-terminal domain of subunit 2 of the COG complex Back     alignment and domain information
>PF10191 COG7: Golgi complex component 7 (COG7); InterPro: IPR019335 The conserved oligomeric Golgi (COG) complex is an eight-subunit (Cog1-8) peripheral Golgi protein involved in membrane trafficking and glycoconjugate synthesis [] Back     alignment and domain information
>PF04048 Sec8_exocyst: Sec8 exocyst complex component specific domain; InterPro: IPR007191 Sec8 is a component of the exocyst complex involved in the docking of exocystic vesicles with a fusion site on the plasma membrane Back     alignment and domain information
>KOG3691 consensus Exocyst complex subunit Sec8 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2180 consensus Late Golgi protein sorting complex, subunit Vps53 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04437 RINT1_TIP1: RINT-1 / TIP-1 family; InterPro: IPR007528 This family includes RINT-1, a Rad50 interacting protein which participates in radiation induced checkpoint control [], that interacts with Rad50 only during late S and G2/M phases Back     alignment and domain information
>PF06046 Sec6: Exocyst complex component Sec6; InterPro: IPR010326 Sec6 is a component of the multiprotein exocyst complex Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1068
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 7e-18
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-16
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
 Score = 88.8 bits (219), Expect = 7e-18
 Identities = 92/645 (14%), Positives = 191/645 (29%), Gaps = 201/645 (31%)

Query: 3   SDSDEDELLQMALKEQAQRRVVYDTPQPRKPVTNYVQQPKSAATQKGGRSQGKKYEEEEE 62
           S  + D ++          R ++ T          + + +    +         Y+    
Sbjct: 47  SKEEIDHIIMSKDAVSGTLR-LFWT---------LLSKQEEMVQKFVEEVLRINYK---- 92

Query: 63  SEVEMLSISSGDEEVSRDRGLAAKNRARGRRDDDGTWDGDEPNCWKRVDEAELARRVREM 122
                  + S  +   R   +  +     R   D  ++ ++      V       R++  
Sbjct: 93  ------FLMSPIKTEQRQPSMMTRMYIEQR---DRLYNDNQVFAKYNV------SRLQPY 137

Query: 123 RETRTAPVAQKYEKKPSMAA-GIKGF--STL-----------QSFPRGM------ECIDP 162
            + R A    +     ++   G+ G   + +                 +       C  P
Sbjct: 138 LKLRQA--LLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSP 195

Query: 163 LGLGIIDNKTLRLIT---DSSGSTPKSDRDNVDNSLREKLMYFSDSFNAKLFLSRVHQNT 219
             +  +  K L  I     S      + +  + +S++ +L         +L  S+ ++N 
Sbjct: 196 ETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI-HSIQAEL--------RRLLKSKPYEN- 245

Query: 220 SSADLEAGALALKTDLKGRTQQRKQLVKDN---------FDCFVSCK---TT-----IDD 262
                    L               LV  N         F+  +SCK   TT      D 
Sbjct: 246 --------CL---------------LVLLNVQNAKAWNAFN--LSCKILLTTRFKQVTDF 280

Query: 263 I-ESKLKRIEEDPEGSG-----TAHLFKLMQGVSSQANRAFEPLFERQAQ---------- 306
           +  +    I  D             L         Q      P   R+            
Sbjct: 281 LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQD----LP---REVLTTNPRRLSII 333

Query: 307 AEKIRSVQGMLQRFRTLFN--LPSTIRGSISKGEFDLAVREYKKAKSIALPSHVNILKRV 364
           AE IR        ++ +    L + I  S++  E     R+     S+  P   +I   +
Sbjct: 334 AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE-YRKMFDRLSV-FPPSAHIPTIL 391

Query: 365 L---------EEVEKVMQEF--KAMLYKSMEDPHIDLTNLENTVRLLLELEPESDPVWHY 413
           L          +V  V+ +    +++ K  ++  I + ++     L L+++ E++   H 
Sbjct: 392 LSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIY----LELKVKLENEYALHR 447

Query: 414 LNVQNHRIRGLFE-----KCTLD---------HEARMETLHN-ELHERAMSDARWLQIQQ 458
             V ++ I   F+        LD         H   +E      L      D R+  ++Q
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRF--LEQ 505

Query: 459 DLNQSSGADYSVTCGNIQPIDSLPVELSGEEVDAFRGRYIR-------RLTAVLIHHIPA 511
            +   S A       +   +++L      +++  ++  YI        RL   ++  +P 
Sbjct: 506 KIRHDSTA----WNASGSILNTL------QQLKFYK-PYICDNDPKYERLVNAILDFLP- 553

Query: 512 FWKVALSVFSGKFAKAEEKVGEGKYSIHSLDEVAGMIRNTISVYE 556
                         K EE +   KY+   L  +A M  +  +++E
Sbjct: 554 --------------KIEENLICSKYT--DLLRIALMAEDE-AIFE 581
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1068
d2d2sa1229 Exocyst complex component EXO84 {Baker's yeast (Sa 97.61
>d2d2sa1 a.118.17.2 (A:525-753) Exocyst complex component EXO84 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Cullin repeat-like
family: Exocyst complex component
domain: Exocyst complex component EXO84
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=97.61  E-value=0.0021  Score=38.04  Aligned_cols=201  Identities=13%  Similarity=0.133  Sum_probs=138.2

Q ss_pred             HHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHCC-------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             9999978976395434762103883799999999632106-------763156999999999999999999999614999
Q 001488          315 GMLQRFRTLFNLPSTIRGSISKGEFDLAVREYKKAKSIAL-------PSHVNILKRVLEEVEKVMQEFKAMLYKSMEDPH  387 (1068)
Q Consensus       315 ~~L~R~kfLFeLP~~L~~~I~~gdYd~aV~dY~kAk~L~~-------~~~v~vf~kV~~EVE~ii~~~k~~L~~kL~~~~  387 (1068)
                      +.-++.+++-++|..|.-+|.+++|+.|+.-..+++.+..       .........+-..|+...+.+...|-..+... 
T Consensus         4 ~~~~~~~wl~d~~d~LDv~Ia~~~feeAl~ll~~~e~~l~~~~~~~~~~~~~~~~~i~~kv~~r~~~L~~~L~~~l~~~-   82 (229)
T d2d2sa1           4 STAQRLKFLDEGVEEIDIELARLRFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSILSS-   82 (229)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHTC-
T ss_pred             HHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_conf             0876441372661888999998609999999999999997363456753278999999999999999999999998525-


Q ss_pred             CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Q ss_conf             99567999999986179999759899997699999999897988999999987888784321579999986311577754
Q 001488          388 IDLTNLENTVRLLLELEPESDPVWHYLNVQNHRIRGLFEKCTLDHEARMETLHNELHERAMSDARWLQIQQDLNQSSGAD  467 (1068)
Q Consensus       388 ~s~ee~~~lI~lLleL~~~~dPiw~~L~sq~~~L~~~le~~~~~~~~k~e~l~~kl~~~~~s~~~~~~lq~~~~~~~~v~  467 (1068)
                      .+..++.+.|.+|..||..+.-.-.||.++..||...+..+.                               .      
T Consensus        83 ~~~~~~~~~v~~L~rLg~~~~A~~lfL~~rs~~l~~~i~~~~-------------------------------~------  125 (229)
T d2d2sa1          83 NEIVHLKSGTENMIKLGLPEQALDLFLQNRSNFIQDLILQIG-------------------------------S------  125 (229)
T ss_dssp             SSHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCC---------------------------------------
T ss_pred             CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC-------------------------------C------
T ss_conf             883899999999999288369999999999999999998457-------------------------------6------


Q ss_pred             CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             33335898888889877872567799999999999999720168999987851684233000126776666898999999
Q 001488          468 YSVTCGNIQPIDSLPVELSGEEVDAFRGRYIRRLTAVLIHHIPAFWKVALSVFSGKFAKAEEKVGEGKYSIHSLDEVAGM  547 (1068)
Q Consensus       468 ~~l~~~~~~~~~~~~~~~~~~ev~~l~~~fi~~Lt~vil~~lp~FWklaqs~~~Gk~~k~~ek~~~~r~s~~~~~e~~~m  547 (1068)
                                     ...        -..|+.+++.+.-..+-+--.--+..|.|.-    +.         ....|..+
T Consensus       126 ---------------~~~--------~~~Yi~~l~~i~f~~i~~t~~~y~aiF~~~~----~~---------~sS~lv~W  169 (229)
T d2d2sa1         126 ---------------VDN--------PTNYLTQLAVIRFQTIKKTVEDFQDIFKELG----AK---------ISSILVDW  169 (229)
T ss_dssp             ---------------CCS--------HHHHHHHHHHHHHHHHHHHHHHHHHHSTTCC----HH---------HHHHHHHH
T ss_pred             ---------------CCC--------HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC----CH---------HHHHHHHH
T ss_conf             ---------------898--------9999999999999999999999999928999----04---------56599999


Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf             999999999986621179988821159999999999999986100138
Q 001488          548 IRNTISVYEIKVHNTFNDLEDSNILRSYMRDAIEEISKACQAFEAKES  595 (1068)
Q Consensus       548 i~e~i~~y~~~i~~~F~~l~~~n~~~~yL~~~L~~i~~~~~sL~~~~~  595 (1068)
                      +.+-++.|+..++--... ...     -...|+..+...|..|..++-
T Consensus       170 a~~ei~~f~~~l~r~l~~-~~~-----~~~~~i~~~~~~c~~L~~vGl  211 (229)
T d2d2sa1         170 CSDEVDNHFKLIDKQLLN-DEM-----LSPGSIKSSRKQIDGLKAVGL  211 (229)
T ss_dssp             HHHHHHHHHHHHHHHTTC---------CCHHHHHHHHHHHHGGGGGTC
T ss_pred             HHHHHHHHHHHHHHHCCC-CHH-----HHHHHHHHHHHHHHHHHHCCC
T ss_conf             999999999999998564-226-----899999999999999987390