Citrus Sinensis ID: 001541
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
ID ![]() | Alignment graph ![]() | Length ![]() |
Definition ![]() |
RBH(Q2H) ![]() |
RBH(H2Q) ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1057 | 2.2.26 [Sep-21-2011] | |||||||
| O22060 | 1057 | Probable sucrose-phosphat | N/A | no | 1.0 | 1.0 | 0.996 | 0.0 | |
| Q43845 | 1053 | Probable sucrose-phosphat | N/A | no | 0.993 | 0.997 | 0.807 | 0.0 | |
| Q43876 | 1059 | Probable sucrose-phosphat | N/A | no | 0.998 | 0.996 | 0.816 | 0.0 | |
| O04932 | 1054 | Probable sucrose-phosphat | N/A | no | 0.988 | 0.991 | 0.790 | 0.0 | |
| Q94BT0 | 1043 | Sucrose-phosphate synthas | yes | no | 0.983 | 0.997 | 0.789 | 0.0 | |
| P49031 | 1045 | Probable sucrose-phosphat | N/A | no | 0.982 | 0.993 | 0.770 | 0.0 | |
| P31928 | 1056 | Sucrose-phosphate synthas | N/A | no | 0.986 | 0.987 | 0.741 | 0.0 | |
| Q6ZHZ1 | 1066 | Probable sucrose-phosphat | yes | no | 0.981 | 0.972 | 0.697 | 0.0 | |
| Q9FY54 | 1047 | Probable sucrose-phosphat | no | no | 0.973 | 0.982 | 0.716 | 0.0 | |
| O04933 | 1081 | Probable sucrose-phosphat | N/A | no | 0.984 | 0.962 | 0.575 | 0.0 |
| >sp|O22060|SPSA1_CITUN Probable sucrose-phosphate synthase 1 OS=Citrus unshiu GN=SPS1 PE=2 SV=1 | Back alignment and function desciption |
|---|
Score = 2179 bits (5647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1053/1057 (99%), Positives = 1055/1057 (99%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE
Sbjct: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE
Sbjct: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG
Sbjct: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA
Sbjct: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK
Sbjct: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA
Sbjct: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY
Sbjct: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG
Sbjct: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNGLLVDPHDQQS+ADALLKLVA KQLWARCRQNGLKNIHLFSWPEHCKTY
Sbjct: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVAGKQLWARCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
LSRIAGCKPRHPQWQR DDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS
Sbjct: 661 LSRIAGCKPRHPQWQRTDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
Query: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS
Sbjct: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
Query: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI
Sbjct: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
Query: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV
Sbjct: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
Query: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASR 960
LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR+NVIPVLASR
Sbjct: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRVNVIPVLASR 960
Query: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY
Sbjct: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
Query: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057
PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV
Sbjct: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057
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Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Citrus unshiu (taxid: 55188) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 4 |
| >sp|Q43845|SPSA_SOLTU Probable sucrose-phosphate synthase OS=Solanum tuberosum GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1778 bits (4604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 854/1058 (80%), Positives = 958/1058 (90%), Gaps = 8/1058 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDD KSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSW+
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDKKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWI 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+AQATRSPQ RNTRLENMCWRIWNLARQKKQLEGE AQ MAKRR ERERGRREA ADMSE
Sbjct: 61 RAQATRSPQRRNTRLENMCWRIWNLARQKKQLEGEQAQWMAKRRQERERGRREAVADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGDIV+D+S+HG+STR RLPRISSV+ ME W+SQQ+GKKLYIVLIS+HGLIRGE
Sbjct: 121 DLSEGEKGDIVADMSSHGESTRGRLPRISSVETMEAWVSQQRGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+P+VDWSYGEPTE L P +
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGEPTE-LAPIS 239
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
+D M +MGESSGAYIIRIPFGP++KYI KE LWP+IPEFVDGALNHII+MS VLGEQIG
Sbjct: 240 TDGLMTEMGESSGAYIIRIPFGPREKYIPKEQLWPYIPEFVDGALNHIIQMSKVLGEQIG 299
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
G PVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL Q R S+DEIN+
Sbjct: 300 SGYPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLAQGRKSKDEINS 359
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEEL+LDASEIVITSTRQEI+EQWRLYDGFDP+LERKLRARIKRNVSCYG+
Sbjct: 360 TYKIMRRIEAEELTLDASEIVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVSCYGR 419
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
FMPRMA+IPPGMEFHHIVP +GDMDGETEG+ED +PDPPIW+EIMRFF+NPRKP+ILA
Sbjct: 420 FMPRMAVIPPGMEFHHIVPHEGDMDGETEGSEDG-KTPDPPIWAEIMRFFSNPRKPMILA 478
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKN+TTLVKAFGECRPLR+LANLTLIMGNRD IDEMSST++++LLS+LK+IDKY
Sbjct: 479 LARPDPKKNLTTLVKAFGECRPLRDLANLTLIMGNRDNIDEMSSTNSALLLSILKMIDKY 538
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLP+VATKNG
Sbjct: 539 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATKNG 598
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNGLLVDPHDQQ++ADALLKLVADKQLWA+CR NGLKNIHLFSWPEHCKTY
Sbjct: 599 GPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAKCRANGLKNIHLFSWPEHCKTY 658
Query: 661 LSRIAGCKPRHPQWQRN-DDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGN-D 718
LSRIA CKPR P+W R+ DD E SE+DSP DSLRDI DISLNL+FSLDGEK+ N D
Sbjct: 659 LSRIASCKPRQPRWLRSIDDDDENSETDSPSDSLRDIHDISLNLRFSLDGEKNDNKENAD 718
Query: 719 DSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFV 778
++LD E R+S+LENAVL+ SKG LK T KS S+DK DQN GA KFPA+RRR+HIFV
Sbjct: 719 NTLDPEV----RRSKLENAVLSLSKGALKSTSKSWSSDKADQNPGAGKFPAIRRRRHIFV 774
Query: 779 ISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDA 838
I+VDCD+++GL + KKI EAVEKER EGSIGFIL+TS ISE+ SFL+S ++P+DFDA
Sbjct: 775 IAVDCDASSGLSGSVKKIFEAVEKERAEGSIGFILATSFNISEVQSFLLSEGMNPTDFDA 834
Query: 839 FICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGE 898
+ICNSG DLYYS+ +SE PFVVD YYHSHIEYRWGGEGLRKTLVRWA+ + DK E+G+
Sbjct: 835 YICNSGGDLYYSSFHSEQNPFVVDLYYHSHIEYRWGGEGLRKTLVRWAASIIDKNGENGD 894
Query: 899 KVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLA 958
++ E S +YCY F V KPG PP KELRKV+RIQALRCH +YCQNGSRINVIPVLA
Sbjct: 895 HIVVEDEDNSADYCYTFKVCKPGTVPPSKELRKVMRIQALRCHAVYCQNGSRINVIPVLA 954
Query: 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 1018
SRSQALRYLYLRWG++LSK+VVFVGESGDTDYEGL+GG+ K VI+KG+C+++S+ IH NR
Sbjct: 955 SRSQALRYLYLRWGMDLSKLVVFVGESGDTDYEGLIGGLRKAVIMKGLCTNASSLIHGNR 1014
Query: 1019 SYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
+YPLSDV+P DSPN++Q E+C++++IR LE+L +LK
Sbjct: 1015 NYPLSDVLPFDSPNVIQADEECSSTEIRCLLEKLAVLK 1052
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Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Solanum tuberosum (taxid: 4113) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q43876|SPSA_VICFA Probable sucrose-phosphate synthase OS=Vicia faba GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1754 bits (4544), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 865/1059 (81%), Positives = 971/1059 (91%), Gaps = 4/1059 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDW+NSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVI GFDETDL+RSWV
Sbjct: 1 MAGNDWLNSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVI-GFDETDLYRSWV 59
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+A ++RSPQERNTRLENMCWRIWNLARQKKQLE EA QR+ KRRLERERGRREATADMSE
Sbjct: 60 RASSSRSPQERNTRLENMCWRIWNLARQKKQLESEAVQRVNKRRLERERGRREATADMSE 119
Query: 121 DLSEGEKGDIVSDVSAHG--DSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIR 178
DLSEGE+GD VSDVS HG DS +SRLPRISS DAMETW++ QKGKKLYIVLISIHGLIR
Sbjct: 120 DLSEGERGDPVSDVSTHGGGDSVKSRLPRISSADAMETWVNSQKGKKLYIVLISIHGLIR 179
Query: 179 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP 238
GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDWSYGEPTEML P
Sbjct: 180 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLAP 239
Query: 239 RNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQ 298
RN+D+F DDMGESSGAYIIRIPFGP++KYI KE LWP+IPEFVDGA+ HII+MS LGEQ
Sbjct: 240 RNTDEFGDDMGESSGAYIIRIPFGPRNKYIPKEELWPYIPEFVDGAMGHIIQMSKALGEQ 299
Query: 299 IGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEI 358
IG G VWPVAIHGHYADAGDSAALLSGALNVPM+FTGHSLGRDKLEQLLKQ RLS DEI
Sbjct: 300 IGSGHAVWPVAIHGHYADAGDSAALLSGALNVPMIFTGHSLGRDKLEQLLKQGRLSTDEI 359
Query: 359 NATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCY 418
N+TYKIMRRIEAEEL+LD +EIVITSTRQEIEEQWRLY+GFDPVLERK+RARI+RNVSCY
Sbjct: 360 NSTYKIMRRIEAEELALDGTEIVITSTRQEIEEQWRLYNGFDPVLERKIRARIRRNVSCY 419
Query: 419 GKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVI 478
G++MPRM++IPPGMEFHHI P DGD++ E EG D+PA DPPIWSEIMRFF+NPRKPVI
Sbjct: 420 GRYMPRMSVIPPGMEFHHIAPLDGDIETEPEGILDHPAPQDPPIWSEIMRFFSNPRKPVI 479
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538
LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTS+SVLLSVLKLID
Sbjct: 480 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLID 539
Query: 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598
KYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLP+VATK
Sbjct: 540 KYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPMVATK 599
Query: 599 NGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCK 658
NGGPVDIHRVLDNGLL+DPHD++S+ADALLKLV++KQLWA+CRQNGLKNIHLFSWPEHCK
Sbjct: 600 NGGPVDIHRVLDNGLLIDPHDEKSIADALLKLVSNKQLWAKCRQNGLKNIHLFSWPEHCK 659
Query: 659 TYLSRIAGCKPRHPQWQR-NDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGN 717
TYLS+IA CKPRHPQWQR D G + +SPGDSLRDIQD+SLNLKFSLDGE+SG SGN
Sbjct: 660 TYLSKIATCKPRHPQWQRSEDGGESSESEESPGDSLRDIQDLSLNLKFSLDGERSGDSGN 719
Query: 718 DDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIF 777
D+SLD +GN DR ++LENAVL+WSKG+ KDTR+ G+T+K QN+ A+KFP LR R +F
Sbjct: 720 DNSLDPDGNATDRTTKLENAVLSWSKGISKDTRRGGATEKSGQNSNASKFPPLRSRNRLF 779
Query: 778 VISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFD 837
VI+VDCD+T+GLL+ K I EA +ER EGS+GFILSTS+TISEI SFL+SG LSP+DFD
Sbjct: 780 VIAVDCDTTSGLLEMIKLIFEAAGEERAEGSVGFILSTSLTISEIQSFLISGGLSPNDFD 839
Query: 838 AFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESG 897
A+ICNSGSDLYY +LNSED FV D Y+HSHIEYRWGGEGLRKTL+RWAS +TDKK+E+
Sbjct: 840 AYICNSGSDLYYPSLNSEDRLFVGDLYFHSHIEYRWGGEGLRKTLIRWASSITDKKSENN 899
Query: 898 EKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVL 957
E++++PAEQLST+YCYAF+V+K GM PP+KELRK++RIQALRCH IYCQNG+R+NVIPVL
Sbjct: 900 EQIVSPAEQLSTDYCYAFNVRKAGMAPPLKELRKLMRIQALRCHPIYCQNGTRLNVIPVL 959
Query: 958 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHAN 1017
ASRSQALRYLY+RWG ELSKMVVFVGE GDTDYEGL+GG+HK+VILKG+ S + +Q+H N
Sbjct: 960 ASRSQALRYLYVRWGFELSKMVVFVGECGDTDYEGLVGGLHKSVILKGVGSRAISQLHNN 1019
Query: 1018 RSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
R+YPLSDVMP+DSPNIVQ E +++DI++ LE++G K
Sbjct: 1020 RNYPLSDVMPLDSPNIVQATEGSSSADIQALLEKVGYHK 1058
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Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Vicia faba (taxid: 3906) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|O04932|SPSA1_CRAPL Probable sucrose-phosphate synthase 1 OS=Craterostigma plantagineum GN=SPS1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1744 bits (4516), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 841/1064 (79%), Positives = 941/1064 (88%), Gaps = 19/1064 (1%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPG+D+AK SLLLRERGRFSPTRYFVEEV++GFDETDLHRSW+
Sbjct: 1 MAGNDWINSYLEAILDVGPGIDEAKGSLLLRERGRFSPTRYFVEEVVSGFDETDLHRSWI 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+AQATRSPQERNTRLENMCWRIWNLARQKKQLE E AQRMAKRRLERERGRREA ADMSE
Sbjct: 61 RAQATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRMAKRRLERERGRREAVADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGDIV D S HG+S R RLPRI+SVD ME W++QQKGKKLYIVLIS+HGLIRGE
Sbjct: 121 DLSEGEKGDIVVDHSHHGESNRGRLPRINSVDTMEAWMNQQKGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+P+VDWSYGEPTEML PRN
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGEPTEMLPPRN 240
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
S++ MD+MGESSG+YI+RIPFGPKDKY+AKELLWPHIPEFVDGAL HII+MS VLGEQIG
Sbjct: 241 SENMMDEMGESSGSYIVRIPFGPKDKYVAKELLWPHIPEFVDGALGHIIQMSKVLGEQIG 300
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
G P+WP AIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL+Q RLSRDEIN+
Sbjct: 301 NGHPIWPAAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLRQGRLSRDEINS 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEELSLDASE+VITSTRQEIEEQWRLYDGFDP+LERKLRARIKRNVSCYG+
Sbjct: 361 TYKIMRRIEAEELSLDASEMVITSTRQEIEEQWRLYDGFDPILERKLRARIKRNVSCYGR 420
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
FMPRM +IPPGMEFHHIVP DGD+D E E NED+ SPDP IW+EIMRFF+NPRKP+ILA
Sbjct: 421 FMPRMMVIPPGMEFHHIVPHDGDLDAEPEFNEDS-KSPDPHIWTEIMRFFSNPRKPMILA 479
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKN+TTLVKAFGEC+PLRELANLTLIMGNRD IDEMS T+ASVLLS+LK+IDKY
Sbjct: 480 LARPDPKKNLTTLVKAFGECKPLRELANLTLIMGNRDNIDEMSGTNASVLLSILKMIDKY 539
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYG VAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG
Sbjct: 540 DLYGLVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 599
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNG+LVDPH+Q+S+ADALLKLVA+K LWA+CR NGLKNIHLFSWPEHCK+Y
Sbjct: 600 GPVDIHRVLDNGILVDPHNQESIADALLKLVAEKHLWAKCRANGLKNIHLFSWPEHCKSY 659
Query: 661 LSRIAGCKPRHPQWQRN-DDGGETSESDSPGDSLRDIQDISLNLKFSLDG------EKSG 713
LS++A CKPR P+W RN +D E SESDSP DSLRDIQDISLNLKFS DG EK G
Sbjct: 660 LSKLASCKPRQPRWLRNEEDDDENSESDSPSDSLRDIQDISLNLKFSFDGDKNESREKGG 719
Query: 714 ASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRR 773
S D DR S++ENAVL WSKGV K ++S S +K + N+ A KFPALRRR
Sbjct: 720 GSHPD----------DRASKIENAVLEWSKGVAKGPQRSMSIEKGEHNSNAGKFPALRRR 769
Query: 774 KHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP 833
K +FVI+VDC + GL ++ +K+ AVE ER EGS+GFIL+TS ISEI FLVS L+P
Sbjct: 770 KIMFVIAVDCKPSAGLSESVRKVFAAVENERAEGSVGFILATSFNISEIRHFLVSEKLNP 829
Query: 834 SDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKK 893
+DFDAFICNSG DLYYS+ +SED PFVVD YYHS IEYRWGGEGLRKTLVRWA+ +TDKK
Sbjct: 830 TDFDAFICNSGGDLYYSSHHSEDNPFVVDLYYHSQIEYRWGGEGLRKTLVRWAASITDKK 889
Query: 894 AESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINV 953
E E V+ E+ S +YCY+F VQKP + PPVKE RKV+RIQALRCHV+YCQNG++INV
Sbjct: 890 GEKEEHVIIEDEETSADYCYSFKVQKPNVVPPVKEARKVMRIQALRCHVVYCQNGNKINV 949
Query: 954 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQ 1013
IPVLASR+QALRYLYLRWG+ELSK VV VGESGDTDYE +LGGVHKTV+L G+C++++N
Sbjct: 950 IPVLASRAQALRYLYLRWGMELSKTVVVVGESGDTDYEEMLGGVHKTVVLSGVCTTATNL 1009
Query: 1014 IHANRSYPLSDVMPIDSPNIVQT-PEDCTTSDIRSSLEQLGLLK 1056
+HANRSYPL+DV+ D NI +T E+C+++D+R+ LE+ G K
Sbjct: 1010 LHANRSYPLADVVCFDDLNIFKTHNEECSSTDLRALLEEHGAFK 1053
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Craterostigma plantagineum (taxid: 4153) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q94BT0|SPSA1_ARATH Sucrose-phosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1728 bits (4476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 835/1058 (78%), Positives = 955/1058 (90%), Gaps = 18/1058 (1%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSS--LLLRERGRFSPTRYFVEEVITGFDETDLHRS 58
MAGNDW+NSYLEAILDVG GLDDA+SS LLLRERGRF+P+RYFVEEVITG+DETDLHRS
Sbjct: 1 MAGNDWVNSYLEAILDVGQGLDDARSSPSLLLRERGRFTPSRYFVEEVITGYDETDLHRS 60
Query: 59 WVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADM 118
WVKA ATRSPQERNTRLENMCWRIWNLARQKKQ E + AQR+AKRRLERE+GRREATADM
Sbjct: 61 WVKAVATRSPQERNTRLENMCWRIWNLARQKKQHEEKEAQRLAKRRLEREKGRREATADM 120
Query: 119 SEDLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIR 178
SE+ SEGEKGDI+SD+S HG+ST+ RLPRI+S ++ME W SQQKG KLY+VLIS+HGLIR
Sbjct: 121 SEEFSEGEKGDIISDISTHGESTKPRLPRINSAESMELWASQQKGNKLYLVLISLHGLIR 180
Query: 179 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP 238
GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVD+SYGEPTEMLTP
Sbjct: 181 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDYSYGEPTEMLTP 240
Query: 239 RNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQ 298
R+S+DF D+MGESSGAYI+RIPFGPKDKYI KELLWPHIPEFVDGA++HI++MSNVLGEQ
Sbjct: 241 RDSEDFSDEMGESSGAYIVRIPFGPKDKYIPKELLWPHIPEFVDGAMSHIMQMSNVLGEQ 300
Query: 299 IGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEI 358
+G GKP+WP AIHGHYADAGD+ ALLSGALNVPML TGHSLGRDKLEQLL+Q RLS++EI
Sbjct: 301 VGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDKLEQLLRQGRLSKEEI 360
Query: 359 NATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCY 418
N+TYKIMRRIE EELSLD SE+VITSTRQEI+EQWRLYDGFDP+LERKLRARIKRNVSCY
Sbjct: 361 NSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVSCY 420
Query: 419 GKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVI 478
G+FMPRM IPPGMEF+HIVP GDM+ +T+GNE++P SPDPPIW+EIMRFF+N RKP+I
Sbjct: 421 GRFMPRMVKIPPGMEFNHIVPHGGDME-DTDGNEEHPTSPDPPIWAEIMRFFSNSRKPMI 479
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538
LALARPDPKKNITTLVKAFGECRPLRELANL LIMGNRDGIDEMSSTS+SVLLSVLKLID
Sbjct: 480 LALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEMSSTSSSVLLSVLKLID 539
Query: 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598
KYDLYGQVAYPKHHKQSDVP+IYRLAAK+KGVFINPA IEPFGLTLIEAAAHGLP+VATK
Sbjct: 540 KYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGLTLIEAAAHGLPMVATK 599
Query: 599 NGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCK 658
NGGPVDIHRVLDNGLLVDPHDQQS+++ALLKLVADK LWA+CRQNGLKNIH FSWPEHCK
Sbjct: 600 NGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQNGLKNIHQFSWPEHCK 659
Query: 659 TYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGND 718
TYLSRI KPRHPQWQ +DDGG+ SE +SP DSLRDIQDISLNLKFS DG SGND
Sbjct: 660 TYLSRITSFKPRHPQWQ-SDDGGDNSEPESPSDSLRDIQDISLNLKFSFDG-----SGND 713
Query: 719 DSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFV 778
+ ++ EG+ DRKS++E AV WSKG KD+RK GS ++ + N+G KFPA+RRRK I V
Sbjct: 714 NYMNQEGSSMDRKSKIEAAVQNWSKG--KDSRKMGSLERSEVNSG--KFPAVRRRKFIVV 769
Query: 779 ISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDA 838
I++D D L+ATK+I +AVEKER EGS+GFILSTS+TISE+ SFLVSG L+P+DFDA
Sbjct: 770 IALDFDGEEDTLEATKRILDAVEKERAEGSVGFILSTSLTISEVQSFLVSGGLNPNDFDA 829
Query: 839 FICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGE 898
FICNSGSDL+Y++LN+EDGPFVVDFYYHSHIEYRWGGEGLRKTL+RWAS + +KKA++ E
Sbjct: 830 FICNSGSDLHYTSLNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKKADNDE 889
Query: 899 KVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLA 958
+++T AE LST+YCY F+V+KP PPV+ELRK+LRIQALRCHV+Y QNG+RINVIPVLA
Sbjct: 890 QIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTRINVIPVLA 949
Query: 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 1018
SR QALRYL++RWG++++KM VFVGESGDTDYEGLLGG+HK+V+LKG+ S+ +HANR
Sbjct: 950 SRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKGVSCSAC--LHANR 1007
Query: 1019 SYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
SYPL+DV+ +S N+V D SD+R +L++L LLK
Sbjct: 1008 SYPLTDVISFESNNVVHASPD---SDVRDALKKLELLK 1042
|
Plays a major role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P49031|SPSA_BETVU Probable sucrose-phosphate synthase OS=Beta vulgaris GN=SPS PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1647 bits (4266), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 814/1056 (77%), Positives = 920/1056 (87%), Gaps = 18/1056 (1%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+AQATRSPQERNTRLENMCWRIWNLARQKKQLE E AQR KRR+E ERGRREATADMSE
Sbjct: 61 RAQATRSPQERNTRLENMCWRIWNLARQKKQLENEEAQRKTKRRMELERGRREATADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEK D+SAHGDSTR RLPRI+S+DAMETWISQQK KKLY+VLIS+HGLIRGE
Sbjct: 121 DLSEGEK-----DISAHGDSTRPRLPRINSLDAMETWISQQKEKKLYLVLISLHGLIRGE 175
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDWSYGEPTEML PR+
Sbjct: 176 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEMLNPRD 235
Query: 241 SDDFMD---DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGE 297
S+ F D +MGESSGAYI+RIPFGP+DKYIAKE LWP+IPEFVDGALNHI++MS VLGE
Sbjct: 236 SNGFDDDDDEMGESSGAYIVRIPFGPRDKYIAKEELWPYIPEFVDGALNHIVQMSKVLGE 295
Query: 298 QIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDE 357
QIG G+ VWPVAIHGHYADAGDSAALLSG LNVPML TGHSLGRDKLEQLLKQ R+S+D+
Sbjct: 296 QIGSGETVWPVAIHGHYADAGDSAALLSGGLNVPMLLTGHSLGRDKLEQLLKQGRMSKDD 355
Query: 358 INATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSC 417
IN TYKIMRRIEAEELSLDASEIVITSTRQEIEEQW LYDGFDPVLERKLRAR+KR VSC
Sbjct: 356 INNTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWHLYDGFDPVLERKLRARMKRGVSC 415
Query: 418 YGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPV 477
YG+FMPRM +IPPGMEF+HIVP +GDMDGETE E++P SPDPPIW+EIMRFF+ PRKP+
Sbjct: 416 YGRFMPRMVVIPPGMEFNHIVPHEGDMDGETEETEEHPTSPDPPIWAEIMRFFSKPRKPM 475
Query: 478 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLI 537
ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTS+SVLLSVLKLI
Sbjct: 476 ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSSSVLLSVLKLI 535
Query: 538 DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 597
D+YDLYGQVAYPKHHKQ+DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP+VAT
Sbjct: 536 DQYDLYGQVAYPKHHKQADVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVAT 595
Query: 598 KNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHC 657
KNGGPVDI RVLDNGLLVDPH+QQS+A ALLKLVADKQLW +C+QNGLKNIHL+SWPEH
Sbjct: 596 KNGGPVDIQRVLDNGLLVDPHEQQSIATALLKLVADKQLWTKCQQNGLKNIHLYSWPEHS 655
Query: 658 KTYLSRIAGCKPRHPQWQR-NDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASG 716
KTYLSRIA + R PQWQR +D+G + E +SP DSLRDI+DISLNL+ + EK
Sbjct: 656 KTYLSRIASSRQRQPQWQRSSDEGLDNQEPESPSDSLRDIKDISLNLEVLVRPEK----- 710
Query: 717 NDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHI 776
+L G + SR+ + +WS GV K RK+ +DKVDQ ++K+PA RRRK I
Sbjct: 711 RVKTLKILGLMTKANSRM--LLCSWSNGVHKMLRKARFSDKVDQ--ASSKYPAFRRRKLI 766
Query: 777 FVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDF 836
+VI+VD D GL D ++I +A KE+ EGSIGFILSTS ++ EI ++L+S + DF
Sbjct: 767 YVIAVDGDYEDGLFDIVRRIFDAAGKEKIEGSIGFILSTSYSMPEIQNYLLSKGFNLHDF 826
Query: 837 DAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAES 896
DA+ICNSGS+LYYS+LNSE+ + D YHSHIEYRWGGEGLR+TL+RWA+ +T+K E+
Sbjct: 827 DAYICNSGSELYYSSLNSEESNIIADSDYHSHIEYRWGGEGLRRTLLRWAASITEKNGEN 886
Query: 897 GEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPV 956
E+V+T E++ST YC+AF ++ PP KELRK +RIQALRCHVIYCQNGS++NVIPV
Sbjct: 887 EEQVITEDEEVSTGYCFAFKIKNQNKVPPTKELRKSMRIQALRCHVIYCQNGSKMNVIPV 946
Query: 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHA 1016
LASRSQALRYLY+RWGVELSKMVVFVGE GDTDYEGLLGGVHKTVILKG+ +++ +HA
Sbjct: 947 LASRSQALRYLYVRWGVELSKMVVFVGECGDTDYEGLLGGVHKTVILKGVSNTALRSLHA 1006
Query: 1017 NRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 1052
NRSYPLS V+ +DSPNI + + C++S+I+S + +L
Sbjct: 1007 NRSYPLSHVVSLDSPNIGEVSKGCSSSEIQSIVTKL 1042
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Beta vulgaris (taxid: 161934) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|P31928|SPSA_SPIOL Sucrose-phosphate synthase OS=Spinacia oleracea GN=SPS1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1630 bits (4221), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 790/1066 (74%), Positives = 905/1066 (84%), Gaps = 23/1066 (2%)
Query: 1 MAGNDWINSYLEAILDVG-PGLD-------DAKSSLLLRERGRFSPTRYFVEEVITGFDE 52
MAGNDWINSYLEAILDVG G+D A SLLLRERG FSP+RYFVEEVI+GFDE
Sbjct: 1 MAGNDWINSYLEAILDVGGQGIDASTGKTSTAPPSLLLRERGHFSPSRYFVEEVISGFDE 60
Query: 53 TDLHRSWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRR 112
TDLHRSWV+A +TRSPQERNTRLEN+CWRIWNLAR+KKQ+EGE AQR+AKR +ERERGRR
Sbjct: 61 TDLHRSWVRAASTRSPQERNTRLENLCWRIWNLARKKKQIEGEEAQRLAKRHVERERGRR 120
Query: 113 EATADMSEDLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLIS 172
EATADMSEDLSEGE+GD V+D+ +ST+ R+ RISSV+ M+ W + K KKLY+VLIS
Sbjct: 121 EATADMSEDLSEGERGDTVADMLFASESTKGRMRRISSVEMMDNWANTFKEKKLYVVLIS 180
Query: 173 IHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEP 232
+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAP VDWSYGEP
Sbjct: 181 LHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPGVDWSYGEP 240
Query: 233 TEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMS 292
TEML+ RNS++ + +GESSGAYIIRIPFGPKDKY+AKELLWP+IPEFVDGAL+HI +MS
Sbjct: 241 TEMLSSRNSENSTEQLGESSGAYIIRIPFGPKDKYVAKELLWPYIPEFVDGALSHIKQMS 300
Query: 293 NVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQAR 352
VLGEQIGGG PVWP ++HGHYADAGDSAALLSGALNVPM+FTGHSLGRDKL+QLLKQ R
Sbjct: 301 KVLGEQIGGGLPVWPASVHGHYADAGDSAALLSGALNVPMVFTGHSLGRDKLDQLLKQGR 360
Query: 353 LSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIK 412
LSR+E++ATYKIMRRIEAEEL LDASEIVITSTRQEIEEQW+LY GFD VLERKLRAR++
Sbjct: 361 LSREEVDATYKIMRRIEAEELCLDASEIVITSTRQEIEEQWQLYHGFDLVLERKLRARMR 420
Query: 413 RNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTN 472
R VSC+G+FMPRMA IPPGMEF+HI P+D DMD + +G++++ A+PDP IWSEIMRFF+N
Sbjct: 421 RGVSCHGRFMPRMAKIPPGMEFNHIAPEDADMDTDIDGHKESNANPDPVIWSEIMRFFSN 480
Query: 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLS 532
RKP+ILALARPDPKKN+TTLVKAFGECRPLRELANLTLI+GNRD IDEMS+TS+SVL+S
Sbjct: 481 GRKPMILALARPDPKKNLTTLVKAFGECRPLRELANLTLIIGNRDDIDEMSTTSSSVLIS 540
Query: 533 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 592
+LKLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GL
Sbjct: 541 ILKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGL 600
Query: 593 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFS 652
PIVATKNGGPVDI VLDNGLL+DPHDQ+S+ADALLKLVADK LW +CRQNGLKNIHLFS
Sbjct: 601 PIVATKNGGPVDIIGVLDNGLLIDPHDQKSIADALLKLVADKHLWTKCRQNGLKNIHLFS 660
Query: 653 WPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKS 712
WPEHCK YLSRIA CKPR P WQR D+G E S++DS GDSLRDIQDISLNLK SLD E++
Sbjct: 661 WPEHCKNYLSRIASCKPRQPNWQRIDEGSENSDTDSAGDSLRDIQDISLNLKLSLDAERT 720
Query: 713 -GASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 771
G + DDSLDSE A+ K ++ENAV SK S DK + G KFPA+R
Sbjct: 721 EGGNSFDDSLDSEE--ANAKRKIENAVAKLSK----------SMDKAQVDVGNLKFPAIR 768
Query: 772 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831
RRK IFVI++DCD T+ LL K + V ++R GSIGFILSTSMT+SE+ S L SG L
Sbjct: 769 RRKCIFVIALDCDVTSDLLQVIKTVISIVGEQRPTGSIGFILSTSMTLSEVDSLLDSGGL 828
Query: 832 SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD 891
P+DFDAFICNSGS+LYY + + + PFV+D Y+SHI+YRWGGEGL KTLV+WA+ V +
Sbjct: 829 RPADFDAFICNSGSELYYPSTDYSESPFVLDQDYYSHIDYRWGGEGLWKTLVKWAASVNE 888
Query: 892 KKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRI 951
KK E+ ++ E ST +CYAF V + PP KELRK++RIQALRCH IYCQNG+R+
Sbjct: 889 KKGENAPNIVIADETSSTTHCYAFKVNDFTLAPPAKELRKMMRIQALRCHAIYCQNGTRL 948
Query: 952 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 1011
NVIPVLASRSQALRYL++RWGVELS VVFVGESGDTDYEGLLGGVHKTVILKGI S++S
Sbjct: 949 NVIPVLASRSQALRYLFMRWGVELSNFVVFVGESGDTDYEGLLGGVHKTVILKGIGSNTS 1008
Query: 1012 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057
N HA R+YP+ VMP+DSPN+ QT C DI +L ++G LK
Sbjct: 1009 N-FHATRAYPMEHVMPVDSPNMFQTG-GCNIDDISDALSKIGCLKA 1052
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Spinacia oleracea (taxid: 3562) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q6ZHZ1|SPSA4_ORYSJ Probable sucrose-phosphate synthase 4 OS=Oryza sativa subsp. japonica GN=SPS4 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1539 bits (3984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 755/1082 (69%), Positives = 868/1082 (80%), Gaps = 45/1082 (4%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDA-------------------KSSLLLRERGRFSPTRY 41
MAGNDWINSYLEAILD G + KSSL+LRERGRFSP RY
Sbjct: 1 MAGNDWINSYLEAILDAGGAAGEISAAAGGGGDGAAATGEKRDKSSLMLRERGRFSPARY 60
Query: 42 FVEEVITGFDETDLHRSWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMA 101
FVEEVI+GFDETDL+++WV+ A RSPQERNTRLENM WRIWNLAR+KKQ+EGE A R+A
Sbjct: 61 FVEEVISGFDETDLYKTWVRTAAMRSPQERNTRLENMSWRIWNLARKKKQIEGEEASRLA 120
Query: 102 KRRLERERGRREATADMSEDLSEGEKGDIVSDVSA-HGDSTRSRLPRISSVDAMETWISQ 160
K+RLERE+ RR A ADMSEDLSEGEKG+ +++ S+ H +STR R+PRI S DA+E W SQ
Sbjct: 121 KQRLEREKARRYAAADMSEDLSEGEKGENINESSSTHDESTRGRMPRIGSTDAIEAWASQ 180
Query: 161 QKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV 220
K KKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGS PGVYRVDLLTRQ+
Sbjct: 181 HKDKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSTPGVYRVDLLTRQI 240
Query: 221 SAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEF 280
SAPDVDWSYGEPTEML+PRNS++F DMGESSGAYI+RIPFGP+DKYI KE LWPHI EF
Sbjct: 241 SAPDVDWSYGEPTEMLSPRNSENFGHDMGESSGAYIVRIPFGPRDKYIPKEHLWPHIQEF 300
Query: 281 VDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLG 340
VDGAL HI++MS VLGEQ+G G+ VWPV IHGHYADAGDSAALLSGALNVPM+FTGHSLG
Sbjct: 301 VDGALVHIMQMSKVLGEQVGSGQLVWPVVIHGHYADAGDSAALLSGALNVPMIFTGHSLG 360
Query: 341 RDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400
RDKLEQLLKQ R +RDEIN YKIMRRIEAEEL LDASEI+ITSTRQEIE+QW LYDGFD
Sbjct: 361 RDKLEQLLKQGRQTRDEINTIYKIMRRIEAEELCLDASEIIITSTRQEIEQQWGLYDGFD 420
Query: 401 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP 460
+ RKLRARIKR VSCYG++MPRM +PPGMEF HIVP D D DGE E NED S DP
Sbjct: 421 LTMARKLRARIKRGVSCYGRYMPRMIAVPPGMEFSHIVPHDVDQDGE-EANEDGSGSTDP 479
Query: 461 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGID 520
PIW++IMRFF+NPRKP+ILALARPDPKKNITTLVKAFGE R LR LANLTLIMGNRD ID
Sbjct: 480 PIWADIMRFFSNPRKPMILALARPDPKKNITTLVKAFGEHRELRNLANLTLIMGNRDVID 539
Query: 521 EMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPF 580
EMSST+++VL S+LKLIDKYDLYGQVAYPKHHKQS+VP+IYRLAA+TKGVFIN AFIEPF
Sbjct: 540 EMSSTNSAVLTSILKLIDKYDLYGQVAYPKHHKQSEVPDIYRLAARTKGVFINCAFIEPF 599
Query: 581 GLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARC 640
GLTLIEAAA+GLP+VAT+NGGPVDIHRVLDNG+LVDPH+Q +A+AL KLV+DKQLWA+C
Sbjct: 600 GLTLIEAAAYGLPMVATRNGGPVDIHRVLDNGILVDPHNQNEIAEALYKLVSDKQLWAQC 659
Query: 641 RQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDIS 700
RQNGLKNIH FSWPEHCK YLSR+ KPRHP+WQ++DD E SE+DSPGDSLRD+ DIS
Sbjct: 660 RQNGLKNIHQFSWPEHCKNYLSRVGTLKPRHPRWQKSDDATEVSEADSPGDSLRDVHDIS 719
Query: 701 LNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQ 760
LNLK SLD EKS N + LE+AV S+GV + RK+ S + ++
Sbjct: 720 LNLKLSLDSEKSSTKEN-----------SVRRNLEDAVQKLSRGVSAN-RKTESVENMEA 767
Query: 761 NTGAAKFPALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTIS 820
TG K+P+LRRRKHI VI++D L++ K I A ER GS+GF+LSTS IS
Sbjct: 768 TTG-NKWPSLRRRKHIVVIAIDSVQDANLVEIIKNIFVASSNERLSGSVGFVLSTSRAIS 826
Query: 821 EIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDG------PFVVDFYYHSHIEYRWG 874
E+HS L SG + +DFDAFICNSGSDL Y + NSED PF++D YH+ IEYRWG
Sbjct: 827 EVHSLLTSGGIEATDFDAFICNSGSDLCYPSSNSEDMLSPAELPFMIDLDYHTQIEYRWG 886
Query: 875 GEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLR 934
GEGLRKTL+ WA++ K+E G+ VL E+ S+ YC +F V+ PPVKELRK +R
Sbjct: 887 GEGLRKTLICWAAE----KSEGGQVVLVEDEECSSTYCISFRVKNAEAVPPVKELRKTMR 942
Query: 935 IQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLL 994
IQALRCHV+Y +GS++NVIPVLASRSQALRYLY+RWGVELS M V VGESGDTDYEGLL
Sbjct: 943 IQALRCHVLYSHDGSKLNVIPVLASRSQALRYLYIRWGVELSNMTVVVGESGDTDYEGLL 1002
Query: 995 GGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054
GGVHKT+ILKG ++ NQ+HA RSY L DV+ D P I E +++S+L+Q G+
Sbjct: 1003 GGVHKTIILKGSFNAVPNQVHAARSYSLQDVISFDKPGITSI-EGYGPDNLKSALQQFGI 1061
Query: 1055 LK 1056
LK
Sbjct: 1062 LK 1063
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Oryza sativa subsp. japonica (taxid: 39947) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|Q9FY54|SPSA2_ARATH Probable sucrose-phosphate synthase 2 OS=Arabidopsis thaliana GN=SPS2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 1505 bits (3896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 764/1067 (71%), Positives = 878/1067 (82%), Gaps = 38/1067 (3%)
Query: 1 MAGNDWINSYLEAILDVGPGL--------DDAKSSLLLRERGRFSPTRYFVEEVITGFDE 52
M GNDW+NSYLEAIL PG+ D+KSSLLLRERG FSPTRYFVEEVITGFDE
Sbjct: 1 MVGNDWVNSYLEAILAAEPGIANSKPPGTGDSKSSLLLRERGHFSPTRYFVEEVITGFDE 60
Query: 53 TDLHRSWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRR 112
TDLHRSWV+A ATRSPQERNTRLEN+CWRIWNLARQKKQ+EG+ A+R AKR ERE+ RR
Sbjct: 61 TDLHRSWVQAAATRSPQERNTRLENLCWRIWNLARQKKQVEGKNAKREAKREREREKARR 120
Query: 113 EATADMSEDLSEGEKGDIVSDVSAHGDS-TRSRLPRISSVDAMETWISQQKGKKLYIVLI 171
E TA+MSED SEGEK D+ ++ D+ T+ R+ RISSVD E W +Q K KKLYIVLI
Sbjct: 121 EVTAEMSEDFSEGEKADLPGEIPTPSDNNTKGRMSRISSVDVFENWFAQHKEKKLYIVLI 180
Query: 172 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 231
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV+APDVD SY E
Sbjct: 181 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDSSYSE 240
Query: 232 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 291
P+EML P ++D + GESSGAYIIRIPFGPKDKY+ KELLWPHIPEFVD AL+HI+++
Sbjct: 241 PSEMLNPIDTD-IEQENGESSGAYIIRIPFGPKDKYVPKELLWPHIPEFVDRALSHIMQI 299
Query: 292 SNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQA 351
S VLGEQIGGG+ VWPV+IHGHYADAGDS ALLSGALNVPM+FTGHSLGRDKLEQLLKQ
Sbjct: 300 SKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKLEQLLKQG 359
Query: 352 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 411
R ++EIN+ YKI RRIEAEEL LDASEIVITSTRQE++EQWRLYDGFDPVLERKLRAR+
Sbjct: 360 R-PKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLERKLRARM 418
Query: 412 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 471
KR VSC G+FMPRM +IPPGMEFHHIVP D D DG+ E NP + DPPIWSEIMRFF+
Sbjct: 419 KRGVSCLGRFMPRMVVIPPGMEFHHIVPHDVDADGDDE----NPQTADPPIWSEIMRFFS 474
Query: 472 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 531
NPRKP+ILALARPDPKKN+ TLVKAFGECRPLRELANLTLIMGNR+ IDE+SST++SVLL
Sbjct: 475 NPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELSSTNSSVLL 534
Query: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 591
S+LKLIDKYDLYGQVA PKHH+QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA AHG
Sbjct: 535 SILKLIDKYDLYGQVAMPKHHQQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAGAHG 594
Query: 592 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 651
LP VAT NGGPVDIHRVLDNGLLVDPHDQQ++ADALLKLV+D+QLW RCRQNGL NIHLF
Sbjct: 595 LPTVATINGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVSDRQLWGRCRQNGLNNIHLF 654
Query: 652 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 711
SWPEHCKTYL+RIA CK RHP+WQR + E S+SDSP DSLRDI DISLNLK SLDGEK
Sbjct: 655 SWPEHCKTYLARIASCKQRHPKWQRVE--FENSDSDSPSDSLRDINDISLNLKLSLDGEK 712
Query: 712 SGA-SGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 770
SG+ +G D +LD+E A+RK+ +E AV ++ KS T+K D +K P L
Sbjct: 713 SGSNNGVDTNLDAEDRAAERKAEVEKAVSTLAQ-------KSKPTEKFD-----SKMPTL 760
Query: 771 RRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH 830
+RRK+IFVISVDC +T+ LL K + +A + S GFILSTSMTISE H+ L+SG
Sbjct: 761 KRRKNIFVISVDCSATSDLLAVVKTVIDAAGR---GSSTGFILSTSMTISETHTALLSGG 817
Query: 831 LSPSDFDAFICNSGSDLYYSTLNSEDG---PFVVDFYYHSHIEYRWGGEGLRKTLVRWAS 887
L P DFDA IC+SGS+LY+++ SED P+ +D YHSHIE+RWGGE LRKTL+RW S
Sbjct: 818 LKPQDFDAVICSSGSELYFTSSGSEDKTALPYTLDADYHSHIEFRWGGESLRKTLIRWIS 877
Query: 888 QVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQN 947
V +KK ++L E STNYC +F V+ P + PP+KELRK++R QALRC+ +YCQN
Sbjct: 878 SVEEKKKTKKGEILVEDESSSTNYCLSFKVKDPALMPPMKELRKLMRNQALRCNAVYCQN 937
Query: 948 GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 1007
G+R+NVIPVLASRSQALRYL +RWG++LS MVVFVG+SGDTDYEGLLGG+HKTVILKG+
Sbjct: 938 GARLNVIPVLASRSQALRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKGLA 997
Query: 1008 SSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054
S Q NRSYP+ DV P++SPNI + E C I+ +LE+LG+
Sbjct: 998 SDLREQ-PGNRSYPMEDVTPLNSPNITEAKE-CGRDAIKVALEKLGI 1042
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Arabidopsis thaliana (taxid: 3702) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
| >sp|O04933|SPSA2_CRAPL Probable sucrose-phosphate synthase 2 OS=Craterostigma plantagineum GN=SPS2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 1244 bits (3220), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/1087 (57%), Positives = 797/1087 (73%), Gaps = 46/1087 (4%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKS---SLLLRERGR-----FSPTRYFVEEVITGFDE 52
MAGN+WIN YLEAILD G D S ++GR F+PT+YFVEEV++G DE
Sbjct: 1 MAGNEWINGYLEAILDTGASAIDENSGGGKTAAAQKGRHHDHHFNPTKYFVEEVVSGVDE 60
Query: 53 TDLHRSWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRR 112
+DLHR+W+K ATR+ +ER++RLENMCWRIW+L R+KKQLE E QR+A R+ ERE+GR+
Sbjct: 61 SDLHRTWIKVVATRNTRERSSRLENMCWRIWHLTRKKKQLEWEDLQRLAARKWEREQGRK 120
Query: 113 EATADMSEDLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLIS 172
+ T DMSEDLSEGEKGD++ + DS R + +E W K KKLYIVLIS
Sbjct: 121 DVTEDMSEDLSEGEKGDVMGETPVALDSPRGNKKYHRNFSNLEVWSDSNKEKKLYIVLIS 180
Query: 173 IHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEP 232
+HGL+RGENMELGRDSDTGGQ+KYVVE+ARAL MPGVYRVDL TRQ+S+P+VDWSY EP
Sbjct: 181 LHGLVRGENMELGRDSDTGGQIKYVVEVARALAKMPGVYRVDLFTRQISSPEVDWSYAEP 240
Query: 233 TEMLTPRNSD----------DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVD 282
TEML+ ++ + +D+GE SGAYIIRIPFGP+DKY+ KELLWPHI EFVD
Sbjct: 241 TEMLSSSSTTAGEAHEPEEEEEEEDLGEGSGAYIIRIPFGPRDKYLRKELLWPHIQEFVD 300
Query: 283 GALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRD 342
GAL+HI+ MS LG+QIGGG+PVWP IHGHYADAGDSAALLSGALNVPM+ TGHSLGR+
Sbjct: 301 GALSHIVNMSKALGDQIGGGQPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRN 360
Query: 343 KLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 402
KLEQLLKQ R ++++IN+ Y+IMRRIEAEELSLDA+E+VITST+QEIEEQW LYDGFD
Sbjct: 361 KLEQLLKQGRQTKEDINSMYRIMRRIEAEELSLDAAELVITSTKQEIEEQWGLYDGFDVK 420
Query: 403 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIV-PQDG---DMDGETEGNEDNPASP 458
LER LRAR +R V+C+G+FMPRMA+IPPGM+F ++V P+DG D D T +P S
Sbjct: 421 LERVLRARARRGVNCHGRFMPRMAVIPPGMDFSNVVVPEDGSEGDGDLATLTEATSPRSV 480
Query: 459 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDG 518
P IW+++MRF TNP KP+ILAL+RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD
Sbjct: 481 -PAIWADVMRFLTNPHKPMILALSRPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDD 539
Query: 519 IDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIE 578
IDEMS +ASVL +VLKLID+YDLYGQVA+PKHHKQSDVPEIYRLA+KTKGVFINPAFIE
Sbjct: 540 IDEMSGGNASVLTTVLKLIDRYDLYGQVAFPKHHKQSDVPEIYRLASKTKGVFINPAFIE 599
Query: 579 PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWA 638
PFGLTLIEAAAHGLP+VATKNGGPVDIHR L+NGLLVDPHDQ ++A+ALLKLV++K LW
Sbjct: 600 PFGLTLIEAAAHGLPMVATKNGGPVDIHRALNNGLLVDPHDQDAIANALLKLVSEKNLWN 659
Query: 639 RCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQD 698
CR+NGLKNIHLFSWPEHC+TYL+R+A C+ RHPQW+ + ET+ DS DSL+D+ D
Sbjct: 660 ECRKNGLKNIHLFSWPEHCRTYLTRVAACRMRHPQWKTDTPLDETAIDDSLNDSLKDVLD 719
Query: 699 ISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKV 758
+SL L S+DGEK + S++ G A + L + V + VL ++ S
Sbjct: 720 MSLRL--SVDGEKMSVN-ESSSVELPGGEA---AELPDQV----RRVLNKIKRQDSGPAQ 769
Query: 759 DQNTGAA-----KFPALRRRKHIFVISVDCDSTTG-----LLDATKKICEAVEKERTEGS 808
+ G A K+P LRRR+ +FVI++DC G ++ + ++I AV +
Sbjct: 770 REAEGKAGDVPGKYPMLRRRRKLFVIALDCYDLKGNPDKKMILSIQEIVRAVRLDPQMSR 829
Query: 809 I-GFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY-STLNSEDGPFVVDFYYH 866
GF LST+M ++E+ FL +G + +DFDA IC+SGS++YY T E G +D Y
Sbjct: 830 FSGFALSTAMPVAELADFLKAGDVKVNDFDALICSSGSEVYYPGTYGEESGKLYLDPDYT 889
Query: 867 SHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPV 926
SHIEYRWGG+GL+KT+ + + D K+ + + S ++C +++++ P V
Sbjct: 890 SHIEYRWGGDGLKKTISKLMNTAEDGKSSVASSPIELVAKSSNSHCLSYAIKDPSKAKKV 949
Query: 927 KELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESG 986
++R+ LR++ LRCH++YC+N + + V+P+LASRSQALRYL++RW + ++ M V +GE+G
Sbjct: 950 DDMRQKLRMRGLRCHLMYCRNSTSMQVVPLLASRSQALRYLFVRWRLSVANMYVILGETG 1009
Query: 987 DTDYEGLLGGVHKTVILKGICSSSSNQ-IHANRSYPLSDVMPIDSPNIVQTPEDCTTSDI 1045
DTDYE L+ G HKT+I++G+ S + + SY DV+P D+P I + I
Sbjct: 1010 DTDYEELISGTHKTLIMRGVVEKGSEELLRTAGSYLRDDVIPQDTPLIAYADKGAKAEHI 1069
Query: 1046 RSSLEQL 1052
+ QL
Sbjct: 1070 VETFRQL 1076
|
Plays a role in photosynthetic sucrose synthesis by catalyzing the rate-limiting step of sucrose biosynthesis from UDP-glucose and fructose- 6-phosphate. Involved in the regulation of carbon partitioning in the leaves of plants. May regulate the synthesis of sucrose and therefore play a major role as a limiting factor in the export of photoassimilates out of the leaf. Plays a role for sucrose availability that is essential for plant growth and fiber elongation. Craterostigma plantagineum (taxid: 4153) EC: 2 EC: . EC: 4 EC: . EC: 1 EC: . EC: 1 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1057 | ||||||
| 3915023 | 1057 | RecName: Full=Probable sucrose-phosphate | 1.0 | 1.0 | 0.996 | 0.0 | |
| 425875179 | 1056 | sucrose phosphate synthase [Mangifera in | 0.998 | 0.999 | 0.891 | 0.0 | |
| 425875169 | 1056 | sucrose phosphate synthase [Mangifera in | 0.998 | 0.999 | 0.889 | 0.0 | |
| 402534430 | 1056 | sucrose phosphate synthase [Mangifera in | 0.998 | 0.999 | 0.889 | 0.0 | |
| 425875183 | 1056 | sucrose phosphate synthase [Mangifera in | 0.998 | 0.999 | 0.888 | 0.0 | |
| 225446235 | 1052 | PREDICTED: probable sucrose-phosphate sy | 0.994 | 0.999 | 0.853 | 0.0 | |
| 385282640 | 1057 | sucrose phosphate synthase 1f [Prunus pe | 0.999 | 0.999 | 0.856 | 0.0 | |
| 399138448 | 1045 | sucrose phosphate synthase [Litchi chine | 0.978 | 0.989 | 0.867 | 0.0 | |
| 157313316 | 1057 | sucrose phosphate synthase protein 1 [Pr | 0.999 | 0.999 | 0.855 | 0.0 | |
| 224120346 | 1049 | predicted protein [Populus trichocarpa] | 0.991 | 0.999 | 0.858 | 0.0 |
| >gi|3915023|sp|O22060.1|SPS1_CITUN RecName: Full=Probable sucrose-phosphate synthase 1; AltName: Full=UDP-glucose-fructose-phosphate glucosyltransferase 1 gi|2588888|dbj|BAA23213.1| sucrose-phosphate synthase [Citrus unshiu] | Back alignment and taxonomy information |
|---|
Score = 2179 bits (5647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 1053/1057 (99%), Positives = 1055/1057 (99%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE
Sbjct: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE
Sbjct: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG
Sbjct: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA
Sbjct: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK
Sbjct: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA
Sbjct: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY
Sbjct: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG
Sbjct: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNGLLVDPHDQQS+ADALLKLVA KQLWARCRQNGLKNIHLFSWPEHCKTY
Sbjct: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVAGKQLWARCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
LSRIAGCKPRHPQWQR DDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS
Sbjct: 661 LSRIAGCKPRHPQWQRTDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
Query: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS
Sbjct: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
Query: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI
Sbjct: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
Query: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV
Sbjct: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
Query: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASR 960
LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR+NVIPVLASR
Sbjct: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRVNVIPVLASR 960
Query: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY
Sbjct: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
Query: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057
PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV
Sbjct: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057
|
Source: Citrus unshiu Species: Citrus unshiu Genus: Citrus Family: Rutaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|425875179|dbj|BAM68535.1| sucrose phosphate synthase [Mangifera indica] | Back alignment and taxonomy information |
|---|
Score = 1959 bits (5076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 941/1056 (89%), Positives = 1011/1056 (95%), Gaps = 1/1056 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSW
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWA 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+AQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE
Sbjct: 61 RAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGD+V D+S+HGDS R RLPRISSVDAME +++QQKGKKLYIVLIS+HGLIRGE
Sbjct: 121 DLSEGEKGDVVGDLSSHGDSNRGRLPRISSVDAMEAFVNQQKGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPVN 240
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
S+DFMD+MGESSGAYIIRIPFGPKDKYI KELLWP+IPEFVDGALNHIIRMSNVLGEQ+G
Sbjct: 241 SEDFMDEMGESSGAYIIRIPFGPKDKYIPKELLWPYIPEFVDGALNHIIRMSNVLGEQVG 300
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
GG+P+WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ RLSRDEIN
Sbjct: 301 GGRPIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINT 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI+RNVSCYG+
Sbjct: 361 TYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARIRRNVSCYGR 420
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
MPRM IIPPGMEFHHIVPQDGDMDGETEGNED+P SPDPPIWSEIMRFFTNPRKP+ILA
Sbjct: 421 IMPRMVIIPPGMEFHHIVPQDGDMDGETEGNEDHPTSPDPPIWSEIMRFFTNPRKPMILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKNI TLVKAFGECRPLRELANLTLIMGNR+GIDEMSST+ASVLLSVLKLIDKY
Sbjct: 481 LARPDPKKNIMTLVKAFGECRPLRELANLTLIMGNREGIDEMSSTNASVLLSVLKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYGQVAYPKHHKQSDVP+IYRLAAK KGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG
Sbjct: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKAKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHLFSWPEHCKTY
Sbjct: 601 GPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
LSRIA CKPR+PQWQRN+D GETSE +SP DSLRDIQDISLNLK SLDGEK GASGND+S
Sbjct: 661 LSRIASCKPRYPQWQRNNDDGETSEEESPSDSLRDIQDISLNLKLSLDGEKGGASGNDNS 720
Query: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
L+SEG ADRK++LENAVLAWSKG+++DTRK+GST+KVD TG+ KFPALRRRKHIFVIS
Sbjct: 721 LESEGP-ADRKTKLENAVLAWSKGIVRDTRKTGSTEKVDPTTGSGKFPALRRRKHIFVIS 779
Query: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
+D D+TTG+++AT+KI EAVEKERTEGSIGFILSTSMTISEIHSFLVSG P+DFDAFI
Sbjct: 780 LDYDTTTGIVEATRKIFEAVEKERTEGSIGFILSTSMTISEIHSFLVSGGFRPNDFDAFI 839
Query: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTL+RW + V DKKAE+ +KV
Sbjct: 840 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWVTSVNDKKAENEDKV 899
Query: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASR 960
+T AEQLSTNYCYAFSVQKPG+ P+KELRK+LRIQALRCHVI+CQNG+RINVIPVLASR
Sbjct: 900 VTAAEQLSTNYCYAFSVQKPGVVTPMKELRKLLRIQALRCHVIFCQNGARINVIPVLASR 959
Query: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
SQALRYLY+RWGVELSKMVVFVGESGDTDYEGLL G+HKTV+LKG CSS+SNQ+HANRSY
Sbjct: 960 SQALRYLYVRWGVELSKMVVFVGESGDTDYEGLLSGLHKTVVLKGACSSASNQVHANRSY 1019
Query: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
PL+DV+P DSPNI+QT ED +S++RS LE+L +LK
Sbjct: 1020 PLTDVIPFDSPNIIQTAEDWASSELRSCLEKLEVLK 1055
|
Source: Mangifera indica Species: Mangifera indica Genus: Mangifera Family: Anacardiaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|425875169|dbj|BAM68530.1| sucrose phosphate synthase [Mangifera indica] gi|425875171|dbj|BAM68531.1| sucrose phosphate synthase [Mangifera indica] gi|425875173|dbj|BAM68532.1| sucrose phosphate synthase [Mangifera indica] gi|425875181|dbj|BAM68536.1| sucrose phosphate synthase [Mangifera indica] gi|425875185|dbj|BAM68538.1| sucrose phosphate synthase [Mangifera indica] | Back alignment and taxonomy information |
|---|
Score = 1957 bits (5070), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 939/1056 (88%), Positives = 1010/1056 (95%), Gaps = 1/1056 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSW
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWA 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+AQATRSPQERNTRLENMCWRIWNLARQKKQLEGE AQRMAKRRLERERGRREATADMSE
Sbjct: 61 RAQATRSPQERNTRLENMCWRIWNLARQKKQLEGETAQRMAKRRLERERGRREATADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGD+V D+S+HGDS R RLPRISSVDAME +++QQKGKKLYIVLIS+HGLIRGE
Sbjct: 121 DLSEGEKGDVVGDLSSHGDSNRGRLPRISSVDAMEAFVNQQKGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPVN 240
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
S+DFMD+MGESSGAYIIRIPFGPKDKYI KELLWP+IPEFVDGALNHII+MSNVLGEQ+G
Sbjct: 241 SEDFMDEMGESSGAYIIRIPFGPKDKYIPKELLWPYIPEFVDGALNHIIQMSNVLGEQVG 300
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
GG+P+WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ RLSRDEIN
Sbjct: 301 GGRPIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINT 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI+RNVSCYG+
Sbjct: 361 TYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARIRRNVSCYGR 420
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
MPRM IIPPGMEFHHIVPQDGDMDGETEGNED+P SPDPPIWSEIMRFFTNPRKP+ILA
Sbjct: 421 IMPRMVIIPPGMEFHHIVPQDGDMDGETEGNEDHPTSPDPPIWSEIMRFFTNPRKPMILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKNI TLVKAFGECRPLRELANLTLIMGNR+GIDEMSST+ASVLLSVLKLIDKY
Sbjct: 481 LARPDPKKNIMTLVKAFGECRPLRELANLTLIMGNREGIDEMSSTNASVLLSVLKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYGQVAYPKHHKQSDVP+IYRLAAK KGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG
Sbjct: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKAKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHLFSWPEHCKTY
Sbjct: 601 GPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
LSRIA CKPR+PQWQRN+D GETSE +SP DSLRDIQDISLNLK SLDGEK GASGND+S
Sbjct: 661 LSRIASCKPRYPQWQRNNDDGETSEEESPSDSLRDIQDISLNLKLSLDGEKGGASGNDNS 720
Query: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
L+SEG ADRK++LENAVLAWSKG+++DTRK+GST+KVD TG+ KFPALRRRKHIFVIS
Sbjct: 721 LESEGP-ADRKTKLENAVLAWSKGIVRDTRKTGSTEKVDPTTGSGKFPALRRRKHIFVIS 779
Query: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
+D D+TTG+++AT+KI EAVEKERTEGSIGFILSTSMTISEIHSFLVSG P+DFDAFI
Sbjct: 780 LDYDTTTGIVEATRKIFEAVEKERTEGSIGFILSTSMTISEIHSFLVSGGFRPNDFDAFI 839
Query: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTL+RW + V DKKAE+ +KV
Sbjct: 840 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWVTSVNDKKAENEDKV 899
Query: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASR 960
+T AEQLSTNYCYAFSVQKPG+ P+KELRK+LRIQALRCHVI+CQNG+RINVIPVLASR
Sbjct: 900 VTAAEQLSTNYCYAFSVQKPGVVTPMKELRKLLRIQALRCHVIFCQNGARINVIPVLASR 959
Query: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
SQALRYLY+RWGVELSKMVVFVGESGDTDYEGLL G+HKTV+LKG CSS+SNQ+HANRSY
Sbjct: 960 SQALRYLYVRWGVELSKMVVFVGESGDTDYEGLLSGLHKTVVLKGACSSTSNQVHANRSY 1019
Query: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
PL+DV+P DSPNI+QT ED +S++RS LE+L +LK
Sbjct: 1020 PLTDVIPFDSPNIIQTAEDWASSELRSCLEKLEVLK 1055
|
Source: Mangifera indica Species: Mangifera indica Genus: Mangifera Family: Anacardiaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|402534430|dbj|BAM37540.1| sucrose phosphate synthase [Mangifera indica] gi|425875175|dbj|BAM68533.1| sucrose phosphate synthase [Mangifera indica] gi|425875177|dbj|BAM68534.1| sucrose phosphate synthase [Mangifera indica] | Back alignment and taxonomy information |
|---|
Score = 1956 bits (5067), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 939/1056 (88%), Positives = 1010/1056 (95%), Gaps = 1/1056 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSW
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWA 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+AQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE
Sbjct: 61 RAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGD+V D+S+HGDS R RLPRISSVDAME +++QQKGKKLYIVLIS+HGLIRGE
Sbjct: 121 DLSEGEKGDVVGDLSSHGDSNRGRLPRISSVDAMEAFVNQQKGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPVN 240
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
S+DFMD+MGESSGAYIIRIPFGPKDKYI KELLWP+IPEFVDGALNHIIRMSNVLGEQ+G
Sbjct: 241 SEDFMDEMGESSGAYIIRIPFGPKDKYIPKELLWPYIPEFVDGALNHIIRMSNVLGEQVG 300
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
GG+P+WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ RLSRDEIN
Sbjct: 301 GGRPIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINT 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI+RNVSCYG+
Sbjct: 361 TYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARIRRNVSCYGR 420
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
MPRM IIPPGMEFHHIVPQDGDMDGETEGNED+P SPDPPIWSEIMRFFTNPRKP+ILA
Sbjct: 421 IMPRMVIIPPGMEFHHIVPQDGDMDGETEGNEDHPTSPDPPIWSEIMRFFTNPRKPMILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKNI TLVKAFGECRPLRELANLTLIMGNR+GIDEMSST+ASVLLSVLKLIDKY
Sbjct: 481 LARPDPKKNIMTLVKAFGECRPLRELANLTLIMGNREGIDEMSSTNASVLLSVLKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYGQVAYPKHHKQSDVP+IYRLAAK KGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG
Sbjct: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKAKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHLFSWPEHCKTY
Sbjct: 601 GPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
LSRIA CKPR+PQWQRN+D GETSE +SP DSLRDIQDISLNLK SLDGEK GASGND+S
Sbjct: 661 LSRIASCKPRYPQWQRNNDDGETSEEESPSDSLRDIQDISLNLKLSLDGEKGGASGNDNS 720
Query: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
L+SEG ADRK++LENAVLAWSKG+++DTRK+GST+KVD TG+ KFPALRRRKHIFVIS
Sbjct: 721 LESEGP-ADRKTKLENAVLAWSKGIVRDTRKTGSTEKVDPTTGSGKFPALRRRKHIFVIS 779
Query: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
+D D+TTG+++AT+KI EAVEKERTEGSIGFILSTSMTISEIHSFLVSG P+DFDAFI
Sbjct: 780 LDYDTTTGIVEATRKIFEAVEKERTEGSIGFILSTSMTISEIHSFLVSGGFRPNDFDAFI 839
Query: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTL+RW + DKKAE+ +KV
Sbjct: 840 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWVTSANDKKAENEDKV 899
Query: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASR 960
+T AEQLSTNYCYAFSVQKPG+ P+KELRK+LRIQALRCHVI+CQNG+RINVIPVLASR
Sbjct: 900 VTAAEQLSTNYCYAFSVQKPGVVTPMKELRKLLRIQALRCHVIFCQNGARINVIPVLASR 959
Query: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
SQALRYLY+RWGVELSKMVVFVGESGDTDYEGLL G+HKTV+LKG CSS+SNQ+HANRSY
Sbjct: 960 SQALRYLYVRWGVELSKMVVFVGESGDTDYEGLLSGLHKTVVLKGACSSASNQVHANRSY 1019
Query: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
PL+DV+P DSP+I+QT ED +S++RS LE+L +LK
Sbjct: 1020 PLTDVIPFDSPSIIQTAEDWASSELRSCLEKLEVLK 1055
|
Source: Mangifera indica Species: Mangifera indica Genus: Mangifera Family: Anacardiaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|425875183|dbj|BAM68537.1| sucrose phosphate synthase [Mangifera indica] | Back alignment and taxonomy information |
|---|
Score = 1955 bits (5065), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 938/1056 (88%), Positives = 1009/1056 (95%), Gaps = 1/1056 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSW
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWA 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+AQATRSPQERNTRLENMCWRIWNLARQKKQLEGE AQRMAKRRLERERGRREATADMSE
Sbjct: 61 RAQATRSPQERNTRLENMCWRIWNLARQKKQLEGETAQRMAKRRLERERGRREATADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGD+V D+S+HGDS R RLPRISSVDAME +++QQKGKKLYIVLIS+HGLIRGE
Sbjct: 121 DLSEGEKGDVVGDLSSHGDSNRGRLPRISSVDAMEAFVNQQKGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPVN 240
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
S+DFMD+MGESSGAYIIRIPFGPKDKYI KELLWP+IPEFVDGALNHII+MSNVLGEQ+G
Sbjct: 241 SEDFMDEMGESSGAYIIRIPFGPKDKYIPKELLWPYIPEFVDGALNHIIQMSNVLGEQVG 300
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
GG+P+WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ RLSRDEIN
Sbjct: 301 GGRPIWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINT 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI+RNVSCYG+
Sbjct: 361 TYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARIRRNVSCYGR 420
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
MPRM IIPPGMEFHHIVPQDGDMDGETEGNED+P SPDPPIWSEIMRFFTNPRKP+ILA
Sbjct: 421 IMPRMVIIPPGMEFHHIVPQDGDMDGETEGNEDHPTSPDPPIWSEIMRFFTNPRKPMILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKNI TLVKAFGECRPLRELANLTLIMGNR+GIDEMSST+ASVLLSVLKLIDKY
Sbjct: 481 LARPDPKKNIMTLVKAFGECRPLRELANLTLIMGNREGIDEMSSTNASVLLSVLKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYGQVAYPKHHKQSDVP+IYRLAAK KGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG
Sbjct: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKAKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHLFSWPEHCKTY
Sbjct: 601 GPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
LSRIA CKPR+PQWQRN+D GETSE +SP DSLRDIQDISLNLK SLDGEK GASGND+S
Sbjct: 661 LSRIASCKPRYPQWQRNNDDGETSEEESPSDSLRDIQDISLNLKLSLDGEKGGASGNDNS 720
Query: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
L+SEG ADRK++LENAVLAWSKG+++DTRK+GST+KVD TG+ KFPALRRRKHIFVIS
Sbjct: 721 LESEGP-ADRKTKLENAVLAWSKGIVRDTRKTGSTEKVDPTTGSGKFPALRRRKHIFVIS 779
Query: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
+D D+TTG+++AT+KI EAVEKERTEGSIGFILSTSMTISEIHSFLVSG P+DFDAFI
Sbjct: 780 LDYDTTTGIVEATRKIFEAVEKERTEGSIGFILSTSMTISEIHSFLVSGGFRPNDFDAFI 839
Query: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTL+RW + DKKAE+ +KV
Sbjct: 840 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWVTSANDKKAENEDKV 899
Query: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASR 960
+T AEQLSTNYCYAFSVQKPG+ P+KELRK+LRIQALRCHVI+CQNG+RINVIPVLASR
Sbjct: 900 VTAAEQLSTNYCYAFSVQKPGVVTPMKELRKLLRIQALRCHVIFCQNGARINVIPVLASR 959
Query: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
SQALRYLY+RWGVELSKMVVFVGESGDTDYEGLL G+HKTV+LKG CSS+SNQ+HANRSY
Sbjct: 960 SQALRYLYVRWGVELSKMVVFVGESGDTDYEGLLSGLHKTVVLKGACSSASNQVHANRSY 1019
Query: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
PL+DV+P DSPNI+QT ED +S++RS LE+L +LK
Sbjct: 1020 PLTDVIPFDSPNIIQTAEDWASSELRSCLEKLEVLK 1055
|
Source: Mangifera indica Species: Mangifera indica Genus: Mangifera Family: Anacardiaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225446235|ref|XP_002265473.1| PREDICTED: probable sucrose-phosphate synthase 1 isoform 1 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 1890 bits (4897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 901/1056 (85%), Positives = 986/1056 (93%), Gaps = 5/1056 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDDAK+SLLLRERGRFSPTRYFVE+VITGFDETDLHRSWV
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKTSLLLRERGRFSPTRYFVEQVITGFDETDLHRSWV 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+A ATRSPQERNTRLENMCWRIWNLARQKKQLEGE AQR+AKRRLER+RGRREA ADMSE
Sbjct: 61 RAAATRSPQERNTRLENMCWRIWNLARQKKQLEGEEAQRIAKRRLERDRGRREAIADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGD VSD+SAHGDS R R+PRISSVDAMETW+S QKGKKLYIVLIS+HGLIRGE
Sbjct: 121 DLSEGEKGDTVSDISAHGDSIRGRMPRISSVDAMETWVSYQKGKKLYIVLISLHGLIRGE 180
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+P+VDWSYGEPTEMLTP N
Sbjct: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPEVDWSYGEPTEMLTPLN 240
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
S+ FM+DMGESSG+YIIRIPFGPKDKY+ KELLWP+IPEFVDGALNHII+MS VLGEQIG
Sbjct: 241 SESFMEDMGESSGSYIIRIPFGPKDKYVEKELLWPYIPEFVDGALNHIIQMSKVLGEQIG 300
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
G+PVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ R+SRDEIN
Sbjct: 301 DGQPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRISRDEINT 360
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEEL+LDASEIVITSTRQEIE+QWRLYDGFDP+LERKLRARI+RNVSCYG+
Sbjct: 361 TYKIMRRIEAEELALDASEIVITSTRQEIEQQWRLYDGFDPILERKLRARIRRNVSCYGR 420
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
FMPRM IIPPGMEFHHIVP DGDMDGETEGNED+P +PDP IWSEIMRFFTNPRKP+ILA
Sbjct: 421 FMPRMVIIPPGMEFHHIVPHDGDMDGETEGNEDHPRTPDPVIWSEIMRFFTNPRKPMILA 480
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLS+LKLIDKY
Sbjct: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSILKLIDKY 540
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAA+GLPIVAT+NG
Sbjct: 541 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAYGLPIVATRNG 600
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNGLLVDPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHLFSWPEHCKTY
Sbjct: 601 GPVDIHRVLDNGLLVDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHLFSWPEHCKTY 660
Query: 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
L++IA CKPRHPQWQR DDG E S++DSPGDSLRDIQDISLNLKFSLDG K+ ASGN +
Sbjct: 661 LTKIASCKPRHPQWQRTDDGTENSDTDSPGDSLRDIQDISLNLKFSLDGHKNEASGNPE- 719
Query: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
+S+ N D KS+LENAVL WSKG ++DTRK+G T+K DQNTG KFPALRRRKHIFVI+
Sbjct: 720 -NSDENAVDGKSKLENAVLTWSKGFVRDTRKAGFTEKSDQNTGTGKFPALRRRKHIFVIA 778
Query: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
VDCD+ T L+ KI EA KE+TEGS+GFILSTSM+ISE+HSFLVSG LSPSDFDAF+
Sbjct: 779 VDCDTNTDTLETAGKILEAFGKEKTEGSVGFILSTSMSISEVHSFLVSGGLSPSDFDAFV 838
Query: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
CNSGSDLYYS+L SED PFV+D YYHSHIEYRWGGEGLRK+LVRW + + DK A++ E++
Sbjct: 839 CNSGSDLYYSSLTSEDSPFVLDLYYHSHIEYRWGGEGLRKSLVRWTASINDKMADN-ERI 897
Query: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASR 960
+ EQ+ T YCYAF VQKPGM PPVKELRK++RI ALRCHVIYCQNG+++NVIP++ASR
Sbjct: 898 VVENEQVLTEYCYAFKVQKPGMVPPVKELRKLMRIHALRCHVIYCQNGTKLNVIPIMASR 957
Query: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
SQALRYLY+RWGV+LS +VVFVGESGDTDYEGLLGGVHKTVILKG+C +SNQ+HANR+Y
Sbjct: 958 SQALRYLYVRWGVDLSNIVVFVGESGDTDYEGLLGGVHKTVILKGVC--ASNQLHANRTY 1015
Query: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
PL+DV+P DSPNIVQ EDC+ SDIRSSLE++G+LK
Sbjct: 1016 PLTDVVPFDSPNIVQMTEDCSGSDIRSSLEKVGVLK 1051
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|385282640|gb|AFI57907.1| sucrose phosphate synthase 1f [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1890 bits (4895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 906/1058 (85%), Positives = 988/1058 (93%), Gaps = 2/1058 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGL-DDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSW 59
MA NDWINSYLEAILDVGPGL DDAKSSLLLRERG FSPTRYFVEEVITGFDETDLHRSW
Sbjct: 1 MASNDWINSYLEAILDVGPGLVDDAKSSLLLRERGHFSPTRYFVEEVITGFDETDLHRSW 60
Query: 60 VKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMS 119
V+A ATRSPQERNTRLEN+CWRIWNLARQKKQLEGE AQRMAKRR+ERERGRREATADMS
Sbjct: 61 VRAAATRSPQERNTRLENLCWRIWNLARQKKQLEGEEAQRMAKRRIERERGRREATADMS 120
Query: 120 EDLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRG 179
EDLSEGEKGD+VSD+SAHGD++R+RLPRI+SVD ME WISQQKGKKLYIVLIS+HGLIRG
Sbjct: 121 EDLSEGEKGDVVSDISAHGDNSRARLPRINSVDTMEMWISQQKGKKLYIVLISLHGLIRG 180
Query: 180 ENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPR 239
ENMELGRDSDTGGQVKYVVELARALG+ PGVYRVDLLTRQVS+PDVDWSYGEPTEMLTP
Sbjct: 181 ENMELGRDSDTGGQVKYVVELARALGTTPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPI 240
Query: 240 NSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQI 299
N+D F ++MGESSG+YIIRIPFGPKDKYI KE LWPHIPEFVDGALNHII+MS VLGEQI
Sbjct: 241 NADGFAEEMGESSGSYIIRIPFGPKDKYIPKEELWPHIPEFVDGALNHIIQMSKVLGEQI 300
Query: 300 GGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEIN 359
GGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ RLSRDEIN
Sbjct: 301 GGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEIN 360
Query: 360 ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYG 419
TYKIMRRIEAEEL+LD+SEIVITSTRQEIEEQWRLYDGFDP+LERKLRARI+RNVSCYG
Sbjct: 361 TTYKIMRRIEAEELALDSSEIVITSTRQEIEEQWRLYDGFDPILERKLRARIRRNVSCYG 420
Query: 420 KFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVIL 479
+FMPRM IIPPGMEFHHIVPQDGDMDGETE NED+P +PDPPIWSEIMRFFTNPRKP+IL
Sbjct: 421 RFMPRMVIIPPGMEFHHIVPQDGDMDGETEANEDHPTAPDPPIWSEIMRFFTNPRKPMIL 480
Query: 480 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDK 539
ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMS TS+SVLLSVLKLIDK
Sbjct: 481 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSGTSSSVLLSVLKLIDK 540
Query: 540 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 599
+DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN
Sbjct: 541 HDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 600
Query: 600 GGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 659
GGPVDIH+VLDNGLLVDPHDQQS+ADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT
Sbjct: 601 GGPVDIHQVLDNGLLVDPHDQQSIADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 660
Query: 660 YLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDD 719
YLSRIA CKPRHPQWQR++DG ETSESDSP DSLRDIQD+SLNLKFSLDGEKSG S ND
Sbjct: 661 YLSRIASCKPRHPQWQRSEDGAETSESDSPSDSLRDIQDLSLNLKFSLDGEKSGTSVNDS 720
Query: 720 SLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVI 779
S + EGN ADR++++ENAVLAWSKG+ +DTRK+G ++K D N+ A KFP LRRRKH+ VI
Sbjct: 721 SSEYEGNTADRRNKIENAVLAWSKGISRDTRKAGFSEKADHNS-AGKFPVLRRRKHLIVI 779
Query: 780 SVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAF 839
+VDCD+ T L++ T+KI EA KER+EGS+GFILSTS+TISEI SFLVSG LSP+DFDAF
Sbjct: 780 AVDCDTITDLIETTRKIFEATGKERSEGSVGFILSTSLTISEISSFLVSGGLSPNDFDAF 839
Query: 840 ICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEK 899
ICNSGSDLYY +++SE+ PFVVDFYYHSHIEYRWGGEGLRKTLVRWA V DKK S E+
Sbjct: 840 ICNSGSDLYYPSIHSEERPFVVDFYYHSHIEYRWGGEGLRKTLVRWAGSVNDKKTGSVEQ 899
Query: 900 VLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLAS 959
++T A+QLST+YCYAF VQKPG PPVKELRK+LRIQALRCHVIYCQNG+R+NVIPVLAS
Sbjct: 900 IVTAADQLSTDYCYAFKVQKPGKVPPVKELRKLLRIQALRCHVIYCQNGTRVNVIPVLAS 959
Query: 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRS 1019
RSQALRYLYLRWGV+LSK+VV GE GDTDYEGLLGG+HK+V+LKG+ S++ +Q+H NR+
Sbjct: 960 RSQALRYLYLRWGVDLSKVVVLAGECGDTDYEGLLGGLHKSVVLKGVASNAISQLHTNRN 1019
Query: 1020 YPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057
YPLSDV+ +DSPNIVQT E C + DIR SLE+LG++K
Sbjct: 1020 YPLSDVLALDSPNIVQTSEGCGSDDIRVSLEKLGVVKT 1057
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|399138448|gb|AFP23360.1| sucrose phosphate synthase [Litchi chinensis] | Back alignment and taxonomy information |
|---|
Score = 1890 bits (4895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 925/1066 (86%), Positives = 993/1066 (93%), Gaps = 32/1066 (3%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSW+
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWI 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+AQATRSPQERNTRLENMCWRIWNLARQKKQLEGEA QRMAKRR ERER RREATADMSE
Sbjct: 61 RAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAVQRMAKRRQERERARREATADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLIS-------- 172
DLSEGEKGD VSD+SAHGD TR+RLPRI+SVD METW+SQQKGKKLYIVLI
Sbjct: 121 DLSEGEKGDTVSDLSAHGDHTRARLPRINSVDVMETWVSQQKGKKLYIVLIRQELNFSYL 180
Query: 173 --IHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYG 230
+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYG
Sbjct: 181 VFLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYG 240
Query: 231 EPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIR 290
EPTEMLTPRNS+D MD+MGESSGAYIIRIPFGPKDKYI KELLWPHIPEFVDGA NHII+
Sbjct: 241 EPTEMLTPRNSEDCMDEMGESSGAYIIRIPFGPKDKYIPKELLWPHIPEFVDGAFNHIIQ 300
Query: 291 MSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ 350
MS+VLGEQ+GGGKPVWP+AIHGHYADAGD+AALLSGALNVPMLFTGHSLGRDKLEQLLKQ
Sbjct: 301 MSSVLGEQVGGGKPVWPIAIHGHYADAGDAAALLSGALNVPMLFTGHSLGRDKLEQLLKQ 360
Query: 351 ARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRAR 410
RLSRDEIN TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP+LERKLRAR
Sbjct: 361 GRLSRDEINKTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPILERKLRAR 420
Query: 411 IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF 470
I+RNVSCYG+FMPRMAIIPPGMEFHHIVP DGDMDGETEGNED+P+SPDP IWSEIMRFF
Sbjct: 421 IRRNVSCYGRFMPRMAIIPPGMEFHHIVPVDGDMDGETEGNEDHPSSPDPHIWSEIMRFF 480
Query: 471 TNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVL 530
TNPRKP+ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSST+ASVL
Sbjct: 481 TNPRKPMILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTNASVL 540
Query: 531 LSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH 590
LSV+KLIDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAAH
Sbjct: 541 LSVIKLIDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH 600
Query: 591 GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHL 650
GLP+VATKNGGPVDIHRVLDNGLL+DPHDQQS+ADALLKLVADKQLWA+CRQNGLKNIHL
Sbjct: 601 GLPMVATKNGGPVDIHRVLDNGLLIDPHDQQSIADALLKLVADKQLWAKCRQNGLKNIHL 660
Query: 651 FSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGE 710
FSWPEHCK+YL+RIA CKPR+PQW ++DDGGETSESDSPGDSLRDI DISLNLKFSLDGE
Sbjct: 661 FSWPEHCKSYLTRIASCKPRYPQWLKDDDGGETSESDSPGDSLRDIHDISLNLKFSLDGE 720
Query: 711 KSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 770
K+G+SGND+SL+SEGNV++R+S++ENAVLA A KFPA+
Sbjct: 721 KNGSSGNDNSLESEGNVSERRSKIENAVLAC----------------------AGKFPAV 758
Query: 771 RRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH 830
RRRKHIFVISVD D+T GLL+A +KI EAV KE+TEGSIGFILSTS+TISE+HSFLV G
Sbjct: 759 RRRKHIFVISVDYDTTAGLLEAIRKIFEAVGKEKTEGSIGFILSTSLTISEMHSFLVLGG 818
Query: 831 LSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVT 890
SPSDFDAFICNSGSDLYYSTLN EDGPFV+DFYYHSHIEYRWGGEGLRKTL+RW + V
Sbjct: 819 FSPSDFDAFICNSGSDLYYSTLNPEDGPFVLDFYYHSHIEYRWGGEGLRKTLIRWVASVA 878
Query: 891 DKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR 950
DKKAE+ EK++T AEQLSTNYCYAF+VQKPGM P+KELRK+LRIQALRCHVIYCQNG+R
Sbjct: 879 DKKAENEEKIVTAAEQLSTNYCYAFTVQKPGMVTPIKELRKLLRIQALRCHVIYCQNGTR 938
Query: 951 INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 1010
INVIPVLASRSQALRYLYLRWGVELSKMVVFVGE GDTDYE LLGG+HK++ILKG CSS+
Sbjct: 939 INVIPVLASRSQALRYLYLRWGVELSKMVVFVGECGDTDYEALLGGLHKSIILKGACSSA 998
Query: 1011 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
SNQ+HANRSYPLSDVMP DSPNIV+TPED T+SD+R+SLE LG+LK
Sbjct: 999 SNQVHANRSYPLSDVMPCDSPNIVETPEDFTSSDVRNSLESLGILK 1044
|
Source: Litchi chinensis Species: Litchi chinensis Genus: Litchi Family: Sapindaceae Order: Sapindales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157313316|gb|ABV32551.1| sucrose phosphate synthase protein 1 [Prunus persica] | Back alignment and taxonomy information |
|---|
Score = 1889 bits (4893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 905/1058 (85%), Positives = 988/1058 (93%), Gaps = 2/1058 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGL-DDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSW 59
MA NDWINSYLEAILDVGPGL DDAKSSLLLRERG FSPTRYFVEEVITGFDETDLHRSW
Sbjct: 1 MASNDWINSYLEAILDVGPGLVDDAKSSLLLRERGHFSPTRYFVEEVITGFDETDLHRSW 60
Query: 60 VKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMS 119
V+A ATRSPQERNTRLEN+CWRIWNLARQKKQLEGE AQRMAKRR+ERERGRREATADMS
Sbjct: 61 VRAAATRSPQERNTRLENLCWRIWNLARQKKQLEGEEAQRMAKRRIERERGRREATADMS 120
Query: 120 EDLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRG 179
EDLSEGEKGD+VSD+SAHGD++R+RLPRI+SVD ME WISQQKGKKLYIVLIS+HGLIRG
Sbjct: 121 EDLSEGEKGDVVSDISAHGDNSRARLPRINSVDTMEMWISQQKGKKLYIVLISLHGLIRG 180
Query: 180 ENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPR 239
ENMELGRDSDTGGQVKYVVELARALG+ PGVYRVDLLTRQVS+PDVDWSYGEPTEMLTP
Sbjct: 181 ENMELGRDSDTGGQVKYVVELARALGTTPGVYRVDLLTRQVSSPDVDWSYGEPTEMLTPI 240
Query: 240 NSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQI 299
N+D F ++MGESSG+YIIRIPFGPKDKYI KE LWPHIPEFVDGALNHII+MS VLGEQI
Sbjct: 241 NADGFAEEMGESSGSYIIRIPFGPKDKYIPKEELWPHIPEFVDGALNHIIQMSKVLGEQI 300
Query: 300 GGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEIN 359
GGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ RLSRDEIN
Sbjct: 301 GGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEIN 360
Query: 360 ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYG 419
TYKIMRRIEAEEL+LD+SEIVITSTRQEIEEQWRLYDGFDP+LERKLRARI+RNVSCYG
Sbjct: 361 TTYKIMRRIEAEELALDSSEIVITSTRQEIEEQWRLYDGFDPILERKLRARIRRNVSCYG 420
Query: 420 KFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVIL 479
+FMPRM IIPPGMEFHHIVPQDGDMDGETE NED+P +PDPPIWSEIMRFFTNPRKP+IL
Sbjct: 421 RFMPRMVIIPPGMEFHHIVPQDGDMDGETEANEDHPTAPDPPIWSEIMRFFTNPRKPMIL 480
Query: 480 ALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDK 539
ALARPDPK+NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMS TS+SVLLSVLKLIDK
Sbjct: 481 ALARPDPKRNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSGTSSSVLLSVLKLIDK 540
Query: 540 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 599
+DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN
Sbjct: 541 HDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 600
Query: 600 GGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 659
GGPVDIH+VLDNGLLVDPHDQQS+ADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT
Sbjct: 601 GGPVDIHQVLDNGLLVDPHDQQSIADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 660
Query: 660 YLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDD 719
YLSRIA CKPRHPQWQR++DG ETSESDSP DSLRDIQD+SLNLKFSLDGEKSG S ND
Sbjct: 661 YLSRIASCKPRHPQWQRSEDGAETSESDSPSDSLRDIQDLSLNLKFSLDGEKSGTSVNDS 720
Query: 720 SLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVI 779
S + EGN ADR++++ENAVLAWSKG+ +DTRK+G ++K D N+ A KFP LRRRKH+ VI
Sbjct: 721 SSEYEGNTADRRNKIENAVLAWSKGISRDTRKAGFSEKADHNS-AGKFPVLRRRKHLIVI 779
Query: 780 SVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAF 839
+VDCD+ T L++ T+KI EA KER+EGS+GFILSTS+TISEI SFLVSG LSP+DFDAF
Sbjct: 780 AVDCDTITDLIETTRKIFEATGKERSEGSVGFILSTSLTISEISSFLVSGGLSPNDFDAF 839
Query: 840 ICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEK 899
ICNSGSDLYY +++SE+ PFVVDFYYHSHIEYRWGGEGLRKTLVRWA V DKK S E+
Sbjct: 840 ICNSGSDLYYPSIHSEERPFVVDFYYHSHIEYRWGGEGLRKTLVRWAGSVNDKKTGSVEQ 899
Query: 900 VLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLAS 959
++T A+QLST+YCYAF VQKPG PPVKELRK+LRIQALRCHVIYCQNG+R+NVIPVLAS
Sbjct: 900 IVTAADQLSTDYCYAFKVQKPGKVPPVKELRKLLRIQALRCHVIYCQNGTRVNVIPVLAS 959
Query: 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRS 1019
RSQALRYLYLRWGV+LSK+VV GE GDTDYEGLLGG+HK+V+LKG+ S++ +Q+H NR+
Sbjct: 960 RSQALRYLYLRWGVDLSKVVVLAGECGDTDYEGLLGGLHKSVVLKGVASNAISQLHTNRN 1019
Query: 1020 YPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLKV 1057
YPLSDV+ +DSPNIVQT E C + DIR SLE+LG++K
Sbjct: 1020 YPLSDVLALDSPNIVQTSEGCGSDDIRVSLEKLGVVKT 1057
|
Source: Prunus persica Species: Prunus persica Genus: Prunus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224120346|ref|XP_002331025.1| predicted protein [Populus trichocarpa] gi|222872955|gb|EEF10086.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 1880 bits (4870), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 907/1056 (85%), Positives = 985/1056 (93%), Gaps = 8/1056 (0%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSSLLLRERGRFSPTRYFVEEVITGFDETDLHRSWV 60
MAGNDWINSYLEAILDVGPGLD+ SLLLRERGRFSPTRYFVEEV++GFDETDLHR+WV
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDEKNPSLLLRERGRFSPTRYFVEEVVSGFDETDLHRAWV 60
Query: 61 KAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSE 120
+AQATRSP+ERNTRLENMCWRIWNLARQKKQLEGE A R AKRRLERERGRREA ADMSE
Sbjct: 61 RAQATRSPRERNTRLENMCWRIWNLARQKKQLEGELAHRNAKRRLERERGRREAVADMSE 120
Query: 121 DLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIRGE 180
DLSEGEKGD V D+SAHGDS R+RL RI+SVDAME W +QQKGKKLYIVLI HGL E
Sbjct: 121 DLSEGEKGDAVGDLSAHGDSIRNRLSRINSVDAMEAWANQQKGKKLYIVLIR-HGLNFRE 179
Query: 181 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRN 240
NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDL TRQVSAPDVDWSYGEPTEMLT RN
Sbjct: 180 NMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLFTRQVSAPDVDWSYGEPTEMLTLRN 239
Query: 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300
S+DF+D+MGESSGAYI+RIPFGPKDKY+ KELLWPHIPEFVDGAL HII+MS LGEQIG
Sbjct: 240 SEDFLDEMGESSGAYIVRIPFGPKDKYVPKELLWPHIPEFVDGALCHIIQMSKSLGEQIG 299
Query: 301 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINA 360
GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ RLSRDEIN+
Sbjct: 300 GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQGRLSRDEINS 359
Query: 361 TYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420
TYKIMRRIEAEELSLD+SEIVITSTRQEIE+QWRLYDGFDP+LERKLRARIKRNVSCYGK
Sbjct: 360 TYKIMRRIEAEELSLDSSEIVITSTRQEIEQQWRLYDGFDPILERKLRARIKRNVSCYGK 419
Query: 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480
FMPRMAIIPPGMEFHHI+PQDGDMDGE EGNED+P SPDPPIW+EIMRFFTNPRKP+ILA
Sbjct: 420 FMPRMAIIPPGMEFHHIIPQDGDMDGEIEGNEDHPTSPDPPIWAEIMRFFTNPRKPMILA 479
Query: 481 LARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540
LARPDPKKNITTLV+AFGECR LRELANLTLIMGNRDGIDEMSST+ASVLLSVLKLIDKY
Sbjct: 480 LARPDPKKNITTLVEAFGECRQLRELANLTLIMGNRDGIDEMSSTNASVLLSVLKLIDKY 539
Query: 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600
DLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG
Sbjct: 540 DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 599
Query: 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660
GPVDIHRVLDNGLLVDPHDQQS+A ALLKLVA+K LWA+CRQNGLKNIHLFSWPEHCKTY
Sbjct: 600 GPVDIHRVLDNGLLVDPHDQQSIAGALLKLVAEKHLWAKCRQNGLKNIHLFSWPEHCKTY 659
Query: 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDS 720
LSRIA CK RHPQWQ++DDG +TS++DSPGDSLRDIQD+SLNLKFSLDGEK+G SGN++
Sbjct: 660 LSRIASCKSRHPQWQKSDDGADTSDTDSPGDSLRDIQDLSLNLKFSLDGEKTGGSGNENP 719
Query: 721 LDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVIS 780
LDSEGN D+KS++ENAVL+WSKGV+KDTRK+ VDQN+ + KFP+LRRRK IFVI+
Sbjct: 720 LDSEGNATDKKSKIENAVLSWSKGVVKDTRKA-----VDQNSSSGKFPSLRRRKQIFVIA 774
Query: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
VD D+ + L +AT+KI EAVEKERTEGSIGFILSTS+TISEI SFL SG SPSDFDAFI
Sbjct: 775 VDFDTISSLAEATRKIFEAVEKERTEGSIGFILSTSLTISEIRSFLASGGFSPSDFDAFI 834
Query: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
CNSGSDLYYST N EDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS V+DKKAE+ E++
Sbjct: 835 CNSGSDLYYSTPNPEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASSVSDKKAENEERI 894
Query: 901 LTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASR 960
+T AEQLST+YCYAF+V+KPG+ PPVKEL+K LRIQALRCH IYCQNG+R+NVIPVLASR
Sbjct: 895 VTAAEQLSTDYCYAFTVKKPGLVPPVKELQKALRIQALRCHAIYCQNGTRLNVIPVLASR 954
Query: 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSY 1020
SQALRYLY+RWGVEL+ MVVF GE GDTDYEGLL G+HK+V+LKG+CSS+SNQ+HANRSY
Sbjct: 955 SQALRYLYVRWGVELANMVVFAGECGDTDYEGLLCGLHKSVVLKGVCSSASNQLHANRSY 1014
Query: 1021 PLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
PL+DVMP +SPNIVQ PE+ +SDIRSSLEQLG LK
Sbjct: 1015 PLTDVMPSESPNIVQAPEE--SSDIRSSLEQLGCLK 1048
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 1057 | ||||||
| TAIR|locus:2149179 | 1043 | SPS1F "sucrose phosphate synth | 0.983 | 0.997 | 0.756 | 0.0 | |
| TAIR|locus:2184891 | 1047 | SPS2F "sucrose phosphate synth | 0.973 | 0.982 | 0.686 | 0.0 | |
| TAIR|locus:2010647 | 1062 | SPS3F "sucrose phosphate synth | 0.976 | 0.971 | 0.556 | 4.7e-309 | |
| TAIR|locus:2124680 | 1050 | ATSPS4F [Arabidopsis thaliana | 0.661 | 0.665 | 0.588 | 1.1e-285 | |
| TAIR|locus:2155894 | 807 | SUS2 "sucrose synthase 2" [Ara | 0.449 | 0.588 | 0.265 | 1.7e-30 | |
| TAIR|locus:2137829 | 809 | SUS3 "AT4G02280" [Arabidopsis | 0.445 | 0.582 | 0.263 | 1.1e-27 | |
| TAIR|locus:2206865 | 942 | SUS6 "sucrose synthase 6" [Ara | 0.448 | 0.503 | 0.260 | 1.2e-27 | |
| TAIR|locus:2166203 | 836 | SUS5 "sucrose synthase 5" [Ara | 0.456 | 0.577 | 0.248 | 1.5e-26 | |
| TAIR|locus:2180489 | 808 | SUS1 "AT5G20830" [Arabidopsis | 0.447 | 0.585 | 0.250 | 6.2e-25 | |
| UNIPROTKB|P31924 | 816 | SUS1 "Sucrose synthase 1" [Ory | 0.444 | 0.575 | 0.247 | 1.6e-24 |
| TAIR|locus:2149179 SPS1F "sucrose phosphate synthase 1F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 4254 (1502.5 bits), Expect = 0., P = 0.
Identities = 800/1058 (75%), Positives = 917/1058 (86%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSS--LLLRERGRFSPTRYFVEEVITGFDETDLHRS 58
MAGNDW+NSYLEAILDVG GLDDA+SS LLLRERGRF+P+RYFVEEVITG+DETDLHRS
Sbjct: 1 MAGNDWVNSYLEAILDVGQGLDDARSSPSLLLRERGRFTPSRYFVEEVITGYDETDLHRS 60
Query: 59 WVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKXXXXXXXXXXXATADM 118
WVKA ATRSPQERNTRLENMCWRIWNLARQKKQ E + AQR+AK ATADM
Sbjct: 61 WVKAVATRSPQERNTRLENMCWRIWNLARQKKQHEEKEAQRLAKRRLEREKGRREATADM 120
Query: 119 SEDLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGLIR 178
SE+ SEGEKGDI+SD+S HG+ST+ RLPRI+S ++ME W SQQKG KLY+VLIS+HGLIR
Sbjct: 121 SEEFSEGEKGDIISDISTHGESTKPRLPRINSAESMELWASQQKGNKLYLVLISLHGLIR 180
Query: 179 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP 238
GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVD+SYGEPTEMLTP
Sbjct: 181 GENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDYSYGEPTEMLTP 240
Query: 239 RNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQ 298
R+S+DF D+MGESSGAYI+RIPFGPKDKYI KELLWPHIPEFVDGA++HI++MSNVLGEQ
Sbjct: 241 RDSEDFSDEMGESSGAYIVRIPFGPKDKYIPKELLWPHIPEFVDGAMSHIMQMSNVLGEQ 300
Query: 299 IGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDKLEQLLKQARLSRDEI 358
+G GKP+WP AIHGHY NVPML TGHSLGRDKLEQLL+Q RLS++EI
Sbjct: 301 VGVGKPIWPSAIHGHYADAGDATALLSGALNVPMLLTGHSLGRDKLEQLLRQGRLSKEEI 360
Query: 359 NATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCY 418
N+TYKIMRRIE EELSLD SE+VITSTRQEI+EQWRLYDGFDP+LERKLRARIKRNVSCY
Sbjct: 361 NSTYKIMRRIEGEELSLDVSEMVITSTRQEIDEQWRLYDGFDPILERKLRARIKRNVSCY 420
Query: 419 GKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVI 478
G+FMPRM IPPGMEF+HIVP GDM+ +T+GNE++P SPDPPIW+EIMRFF+N RKP+I
Sbjct: 421 GRFMPRMVKIPPGMEFNHIVPHGGDME-DTDGNEEHPTSPDPPIWAEIMRFFSNSRKPMI 479
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMXXXXXXXXXXXXXXID 538
LALARPDPKKNITTLVKAFGECRPLRELANL LIMGNRDGIDEM ID
Sbjct: 480 LALARPDPKKNITTLVKAFGECRPLRELANLALIMGNRDGIDEMSSTSSSVLLSVLKLID 539
Query: 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598
KYDLYGQVAYPKHHKQSDVP+IYRLAAK+KGVFINPA IEPFGLTLIEAAAHGLP+VATK
Sbjct: 540 KYDLYGQVAYPKHHKQSDVPDIYRLAAKSKGVFINPAIIEPFGLTLIEAAAHGLPMVATK 599
Query: 599 NGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCK 658
NGGPVDIHRVLDNGLLVDPHDQQS+++ALLKLVADK LWA+CRQNGLKNIH FSWPEHCK
Sbjct: 600 NGGPVDIHRVLDNGLLVDPHDQQSISEALLKLVADKHLWAKCRQNGLKNIHQFSWPEHCK 659
Query: 659 TYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGND 718
TYLSRI KPRHPQWQ +DDGG+ SE +SP DSLRDIQDISLNLKFS DG SGND
Sbjct: 660 TYLSRITSFKPRHPQWQ-SDDGGDNSEPESPSDSLRDIQDISLNLKFSFDG-----SGND 713
Query: 719 DSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFV 778
+ ++ EG+ DRKS++E AV WSKG KD+RK GS ++ + N+G KFPA+RRRK I V
Sbjct: 714 NYMNQEGSSMDRKSKIEAAVQNWSKG--KDSRKMGSLERSEVNSG--KFPAVRRRKFIVV 769
Query: 779 ISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDA 838
I++D D L+ATK+I +AVEKER EGS+GFILSTS+TISE+ SFLVSG L+P+DFDA
Sbjct: 770 IALDFDGEEDTLEATKRILDAVEKERAEGSVGFILSTSLTISEVQSFLVSGGLNPNDFDA 829
Query: 839 FICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGE 898
FICNSGSDL+Y++LN+EDGPFVVDFYYHSHIEYRWGGEGLRKTL+RWAS + +KKA++ E
Sbjct: 830 FICNSGSDLHYTSLNNEDGPFVVDFYYHSHIEYRWGGEGLRKTLIRWASSLNEKKADNDE 889
Query: 899 KVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLA 958
+++T AE LST+YCY F+V+KP PPV+ELRK+LRIQALRCHV+Y QNG+RINVIPVLA
Sbjct: 890 QIVTLAEHLSTDYCYTFTVKKPAAVPPVRELRKLLRIQALRCHVVYSQNGTRINVIPVLA 949
Query: 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 1018
SR QALRYL++RWG++++KM VFVGESGDTDYEGLLGG+HK+V+LKG+ S+ +HANR
Sbjct: 950 SRIQALRYLFVRWGIDMAKMAVFVGESGDTDYEGLLGGLHKSVVLKGVSCSAC--LHANR 1007
Query: 1019 SYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLLK 1056
SYPL+DV+ +S N+V D SD+R +L++L LLK
Sbjct: 1008 SYPLTDVISFESNNVVHASPD---SDVRDALKKLELLK 1042
|
|
| TAIR|locus:2184891 SPS2F "sucrose phosphate synthase 2F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3756 (1327.2 bits), Expect = 0., P = 0.
Identities = 733/1067 (68%), Positives = 843/1067 (79%)
Query: 1 MAGNDWINSYLEAILDVGPGL--------DDAKSSLLLRERGRFSPTRYFVEEVITGFDE 52
M GNDW+NSYLEAIL PG+ D+KSSLLLRERG FSPTRYFVEEVITGFDE
Sbjct: 1 MVGNDWVNSYLEAILAAEPGIANSKPPGTGDSKSSLLLRERGHFSPTRYFVEEVITGFDE 60
Query: 53 TDLHRSWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKXXXXXXXXXX 112
TDLHRSWV+A ATRSPQERNTRLEN+CWRIWNLARQKKQ+EG+ A+R AK
Sbjct: 61 TDLHRSWVQAAATRSPQERNTRLENLCWRIWNLARQKKQVEGKNAKREAKREREREKARR 120
Query: 113 XATADMSEDLSEGEKGDIVSDVSAHGDS-TRSRLPRISSVDAMETWISQQKGKKLYIVLI 171
TA+MSED SEGEK D+ ++ D+ T+ R+ RISSVD E W +Q K KKLYIVLI
Sbjct: 121 EVTAEMSEDFSEGEKADLPGEIPTPSDNNTKGRMSRISSVDVFENWFAQHKEKKLYIVLI 180
Query: 172 SIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGE 231
S+HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV+APDVD SY E
Sbjct: 181 SLHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVTAPDVDSSYSE 240
Query: 232 PTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRM 291
P+EML P ++D + GESSGAYIIRIPFGPKDKY+ KELLWPHIPEFVD AL+HI+++
Sbjct: 241 PSEMLNPIDTD-IEQENGESSGAYIIRIPFGPKDKYVPKELLWPHIPEFVDRALSHIMQI 299
Query: 292 SNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDKLEQLLKQA 351
S VLGEQIGGG+ VWPV+IHGHY NVPM+FTGHSLGRDKLEQLLKQ
Sbjct: 300 SKVLGEQIGGGQQVWPVSIHGHYADAGDSTALLSGALNVPMVFTGHSLGRDKLEQLLKQG 359
Query: 352 RLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI 411
R ++EIN+ YKI RRIEAEEL LDASEIVITSTRQE++EQWRLYDGFDPVLERKLRAR+
Sbjct: 360 R-PKEEINSNYKIWRRIEAEELCLDASEIVITSTRQEVDEQWRLYDGFDPVLERKLRARM 418
Query: 412 KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFT 471
KR VSC G+FMPRM +IPPGMEFHHIVP D D DG+ E NP + DPPIWSEIMRFF+
Sbjct: 419 KRGVSCLGRFMPRMVVIPPGMEFHHIVPHDVDADGDDE----NPQTADPPIWSEIMRFFS 474
Query: 472 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMXXXXXXXXX 531
NPRKP+ILALARPDPKKN+ TLVKAFGECRPLRELANLTLIMGNR+ IDE+
Sbjct: 475 NPRKPMILALARPDPKKNLVTLVKAFGECRPLRELANLTLIMGNRNDIDELSSTNSSVLL 534
Query: 532 XXXXXIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 591
IDKYDLYGQVA PKHH+QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA AHG
Sbjct: 535 SILKLIDKYDLYGQVAMPKHHQQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAGAHG 594
Query: 592 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLF 651
LP VAT NGGPVDIHRVLDNGLLVDPHDQQ++ADALLKLV+D+QLW RCRQNGL NIHLF
Sbjct: 595 LPTVATINGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVSDRQLWGRCRQNGLNNIHLF 654
Query: 652 SWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSLDGEK 711
SWPEHCKTYL+RIA CK RHP+WQR + E S+SDSP DSLRDI DISLNLK SLDGEK
Sbjct: 655 SWPEHCKTYLARIASCKQRHPKWQRVEF--ENSDSDSPSDSLRDINDISLNLKLSLDGEK 712
Query: 712 SGAS-GNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 770
SG++ G D +LD+E A+RK+ +E AV ++ KS T+K D +K P L
Sbjct: 713 SGSNNGVDTNLDAEDRAAERKAEVEKAVSTLAQ-------KSKPTEKFD-----SKMPTL 760
Query: 771 RRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH 830
+RRK+IFVISVDC +T+ LL K + +A + S GFILSTSMTISE H+ L+SG
Sbjct: 761 KRRKNIFVISVDCSATSDLLAVVKTVIDAAGRG---SSTGFILSTSMTISETHTALLSGG 817
Query: 831 LSPSDFDAFICNSGSDLYYSTLNSEDG---PFVVDFYYHSHIEYRWGGEGLRKTLVRWAS 887
L P DFDA IC+SGS+LY+++ SED P+ +D YHSHIE+RWGGE LRKTL+RW S
Sbjct: 818 LKPQDFDAVICSSGSELYFTSSGSEDKTALPYTLDADYHSHIEFRWGGESLRKTLIRWIS 877
Query: 888 QVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQN 947
V +KK ++L E STNYC +F V+ P + PP+KELRK++R QALRC+ +YCQN
Sbjct: 878 SVEEKKKTKKGEILVEDESSSTNYCLSFKVKDPALMPPMKELRKLMRNQALRCNAVYCQN 937
Query: 948 GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 1007
G+R+NVIPVLASRSQALRYL +RWG++LS MVVFVG+SGDTDYEGLLGG+HKTVILKG+
Sbjct: 938 GARLNVIPVLASRSQALRYLLVRWGIDLSNMVVFVGDSGDTDYEGLLGGIHKTVILKGLA 997
Query: 1008 SSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054
S Q NRSYP+ DV P++SPNI + E C I+ +LE+LG+
Sbjct: 998 SDLREQ-PGNRSYPMEDVTPLNSPNITEAKE-CGRDAIKVALEKLGI 1042
|
|
| TAIR|locus:2010647 SPS3F "sucrose phosphate synthase 3F" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2965 (1048.8 bits), Expect = 4.7e-309, P = 4.7e-309
Identities = 599/1077 (55%), Positives = 759/1077 (70%)
Query: 1 MAGNDWINSYLEAILDV-GPGLDDAK----SSLLLRER-GR-FSPTRYFVEEVITGFDET 53
MAGN+WIN YLEAILD G+++ + +S+ LRE G+ F+PT+YFVEEV+TG DET
Sbjct: 1 MAGNEWINGYLEAILDSQAQGIEETQQKPQASVNLREGDGQYFNPTKYFVEEVVTGVDET 60
Query: 54 DLHRSWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKXXXXXXXXXXX 113
DLHR+W+K ATR+ +ERN+RLENMCWRIW+L R+KKQLE E +QR+A
Sbjct: 61 DLHRTWLKVVATRNSRERNSRLENMCWRIWHLTRKKKQLEWEDSQRIANRRLEREQGRRD 120
Query: 114 ATADMSEDLSEGEKGDIVSDVSAHGDSTRSRLPRISSVDAMETWISQQKGKKLYIVLISI 173
AT D+SEDLSEGEKGD + ++ ++ R +L R ++ +E W +K +LY+VLIS+
Sbjct: 121 ATEDLSEDLSEGEKGDGLGEI-VQPETPRRQLQR--NLSNLEIWSDDKKENRLYVVLISL 177
Query: 174 HGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPT 233
HGL+RGENMELG DSDTGGQVKYVVELARAL MPGVYRVDL TRQ+ + +VDWSY EPT
Sbjct: 178 HGLVRGENMELGSDSDTGGQVKYVVELARALARMPGVYRVDLFTRQICSSEVDWSYAEPT 237
Query: 234 EMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSN 293
EMLT D D+ GESSGAYIIRIPFGP+DKY+ KE+LWP + EFVDGAL HI+ MS
Sbjct: 238 EMLTTAEDCDG-DETGESSGAYIIRIPFGPRDKYLNKEILWPFVQEFVDGALAHILNMSK 296
Query: 294 VLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDKLEQLLKQARL 353
VLGEQIG GKPVWP IHGHY NVPM+ TGHSLGR+KLEQLLKQ R
Sbjct: 297 VLGEQIGKGKPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRNKLEQLLKQGRQ 356
Query: 354 SRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKR 413
S+++IN+TYKI RRIEAEELSLDA+E+VITSTRQEI+EQW LYDGFD LE+ LRAR +R
Sbjct: 357 SKEDINSTYKIKRRIEAEELSLDAAELVITSTRQEIDEQWGLYDGFDVKLEKVLRARARR 416
Query: 414 NVSCYGKFMPRMAIIPPGMEFHHI-----VPQ-DGDMDGETEGNEDNPASPDPPIWSEIM 467
V+C+G+FMPRMA+IPPGM+F ++ P+ DGD+ G E + P IWSE+M
Sbjct: 417 GVNCHGRFMPRMAVIPPGMDFTNVEVQEDTPEGDGDLASLVGGTEGSSPKAVPTIWSEVM 476
Query: 468 RFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMXXXXX 527
RFFTNP KP+ILAL+RPDPKKNITTL+KAFGECRPLRELANLTLIMGNRD IDE+
Sbjct: 477 RFFTNPHKPMILALSRPDPKKNITTLLKAFGECRPLRELANLTLIMGNRDDIDELSSGNA 536
Query: 528 XXXXXXXXXIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 587
IDKYDLYG VAYPKHHKQSDVP+IYRLAA TKGVFINPA +EPFGLTLIEA
Sbjct: 537 SVLTTVLKLIDKYDLYGSVAYPKHHKQSDVPDIYRLAANTKGVFINPALVEPFGLTLIEA 596
Query: 588 AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKN 647
AAHGLP+VATKNGGPVDIHR L NGLLVDPHDQ+++A+ALLKLV++K LW CR NG KN
Sbjct: 597 AAHGLPMVATKNGGPVDIHRALHNGLLVDPHDQEAIANALLKLVSEKNLWHECRINGWKN 656
Query: 648 IHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESD-SPGDSLRDIQDISLNLKFS 706
IHLFSWPEHC+TYL+RIA C+ RHPQWQ + D + + S DSL+D+QD+SL L S
Sbjct: 657 IHLFSWPEHCRTYLTRIAACRMRHPQWQTDADEVAAQDDEFSLNDSLKDVQDMSLRL--S 714
Query: 707 LDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAK 766
+DG+K +G+ + +S V SR+ + SK L+ ++S N G+ K
Sbjct: 715 MDGDKPSLNGSLEP-NSADPVKQIMSRMRTPEIK-SKPELQGKKQS-------DNLGS-K 764
Query: 767 FPALRRRKHIFVISVDCDSTTGLLDAT------KKICEAVEKE-RTEGSIGFILSTSMTI 819
+P LRRR+ + V++VDC G D + I +AV + + + GF +STSM +
Sbjct: 765 YPVLRRRERLVVLAVDCYDNEGAPDEKAMVPMIQNIIKAVRSDPQMAKNSGFAISTSMPL 824
Query: 820 SEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLR 879
E+ FL S + S+FD IC+SGS++YY E+G + D Y SHI+YRWG EGL+
Sbjct: 825 DELTRFLKSAKIQVSEFDTLICSSGSEVYYP--GGEEGKLLPDPDYSSHIDYRWGMEGLK 882
Query: 880 KTLVRW--ASQVTDKKAESGEKVLTPAEQLSTN-YCYAFSVQKPGMTPPVKELRKVLRIQ 936
T+ + + V + G L +Q S+N +C A+ ++ V +LR+ LR++
Sbjct: 883 NTVWKLMNTTAVGGEARNKGSPSLIQEDQASSNSHCVAYMIKDRSKVMRVDDLRQKLRLR 942
Query: 937 ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGG 996
LRCH +YC+N +R+ ++P+LASRSQALRYL++RW + ++ M V VG+ GDTDYE L+ G
Sbjct: 943 GLRCHPMYCRNSTRMQIVPLLASRSQALRYLFVRWRLNVANMYVVVGDRGDTDYEELISG 1002
Query: 997 VHKTVILKGICSSSSNQIHANRSYPL-SDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 1052
HKTVI+KG+ + S+ + RS L D++P +SP I D +I +QL
Sbjct: 1003 THKTVIVKGLVTLGSDALL--RSTDLRDDIVPSESPFIGFLKVDSPVKEITDIFKQL 1057
|
|
| TAIR|locus:2124680 ATSPS4F [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 2159 (765.1 bits), Expect = 1.1e-285, Sum P(3) = 1.1e-285
Identities = 429/729 (58%), Positives = 534/729 (73%)
Query: 36 FSPTRYFVEEVITGFDETDLHRSWVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGE 95
FSP +YFVEEV+ FDE+DL+++W+K ATR+ +ER+ RLEN+CWRIW+LAR+KKQ+ +
Sbjct: 61 FSPIKYFVEEVVNSFDESDLYKTWIKVIATRNTRERSNRLENICWRIWHLARKKKQIVWD 120
Query: 96 AAQRMAKXXXXXXXXXXXATADMSEDLSEGEK----GDIV-SDVSAHGDSTRSRLPRISS 150
R++K A D+ +LSEGEK G+ S+V + R +PRI S
Sbjct: 121 DGVRLSKRRIEREQGRNDAEEDLLSELSEGEKDKNDGEKEKSEVVTTLEPPRDHMPRIRS 180
Query: 151 VDAMETWISQQKGKK-LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPG 209
M+ W K + LYIVLIS+HGL+RGENMELGRDSDTGGQVKYVVELARAL + G
Sbjct: 181 --EMQIWSEDDKSSRNLYIVLISMHGLVRGENMELGRDSDTGGQVKYVVELARALANTEG 238
Query: 210 VYRVDLLTRQVSAPDVDWSYGEPTEMLT--PRNSDDFMDDMGESSGAYIIRIPFGPKDKY 267
V+RVDLLTRQ+S+P+VD+SYGEP EML+ P SD S G+YIIRIP G +DKY
Sbjct: 239 VHRVDLLTRQISSPEVDYSYGEPVEMLSCPPEGSD--------SCGSYIIRIPCGSRDKY 290
Query: 268 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXX 327
I KE LWPHIPEFVDGALNHI+ ++ LGEQ+ GGKP+WP IHGHY
Sbjct: 291 IPKESLWPHIPEFVDGALNHIVSIARSLGEQVNGGKPIWPYVIHGHYADAGEVAAHLAGA 350
Query: 328 XNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQ 387
NVPM+ TGHSLGR+K EQLL+Q R++R++I+ TYKIMRRIEAEE SLDA+E+V+TSTRQ
Sbjct: 351 LNVPMVLTGHSLGRNKFEQLLQQGRITREDIDRTYKIMRRIEAEEQSLDAAEMVVTSTRQ 410
Query: 388 EIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDG-DMDG 446
EI+ QW LYDGFD LERKLR R +R VSC G++MPRM +IPPGM+F +++ QD + DG
Sbjct: 411 EIDAQWGLYDGFDIKLERKLRVRRRRGVSCLGRYMPRMVVIPPGMDFSYVLTQDSQEPDG 470
Query: 447 ETE---GNEDNPAS-PDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRP 502
+ + G + N P PPIWSEIMRFF+NP KP ILAL+RPD KKN+TTLVKAFGEC+P
Sbjct: 471 DLKSLIGPDRNQIKKPVPPIWSEIMRFFSNPHKPTILALSRPDHKKNVTTLVKAFGECQP 530
Query: 503 LRELANLTLIMGNRDGIDEMXXXXXXXXXXXXXXIDKYDLYGQVAYPKHHKQSDVPEIYR 562
LRELANL LI+GNRD I+EM ID+YDLYGQVAYPKHHKQS+VP+IYR
Sbjct: 531 LRELANLVLILGNRDDIEEMPNSSSVVLMNVLKLIDQYDLYGQVAYPKHHKQSEVPDIYR 590
Query: 563 LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622
LAAKTKGVFINPA +EPFGLTLIEAAA+GLPIVAT+NGGPVDI + L+NGLLVDPHDQQ+
Sbjct: 591 LAAKTKGVFINPALVEPFGLTLIEAAAYGLPIVATRNGGPVDIVKALNNGLLVDPHDQQA 650
Query: 623 VADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGE 682
++DALLKLVA+K LWA CR+NGLKNIH FSWPEHC+ YLS + C+ RHP + D +
Sbjct: 651 ISDALLKLVANKHLWAECRKNGLKNIHRFSWPEHCRNYLSHVEHCRNRHPT--SSLDIMK 708
Query: 683 TSESDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWS 742
E + DSLRD+ DISL +FS +G+ + +G D+ + + D S++ N++ S
Sbjct: 709 VPE-ELTSDSLRDVDDISL--RFSTEGDFT-LNGELDAGTRQKKLVDAISQM-NSMKGCS 763
Query: 743 KGVLKDTRK 751
+ R+
Sbjct: 764 AAIYSPGRR 772
|
|
| TAIR|locus:2155894 SUS2 "sucrose synthase 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 371 (135.7 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 136/512 (26%), Positives = 231/512 (45%)
Query: 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V++S HG N+ LG DTGGQV Y+++ RAL + + R+ +V +
Sbjct: 278 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRALENEM-LLRIQKQGLEVIPKILIV 334
Query: 228 SYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKDKYIAKELLWPHIPEFVDG 283
+ P T N ++ + + A+I+RIPF G K+I++ +WP++ F +
Sbjct: 335 TRLLPEAKGTTCNQR--LERVSGTEHAHILRIPFRTEKGILRKWISRFDVWPYLETFAED 392
Query: 284 ALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDK 343
A SN + ++ G P I G+Y V H+L + K
Sbjct: 393 A-------SNEISAELQGV----PNLIIGNYSDGNLVASLLASKLGVIQCNIAHALEKTK 441
Query: 344 LEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403
+ R D+ Y + A+ ++++ ++ +ITST QEI ++
Sbjct: 442 YPESDIYWRNHEDK----YHFSSQFTADLIAMNNADFIITSTYQEIAGSKNNVGQYESHT 497
Query: 404 ERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVP-QDGD--MDGETEGNEDNPASPDP 460
+ + R V F P+ I+ PG + P D + + E E+ S +
Sbjct: 498 AFTMPG-LYRVVHGIDVFDPKFNIVSPGADMTIYFPYSDKERRLTALHESIEELLFSAEQ 556
Query: 461 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGID 520
E + ++ KP+I ++AR D KN+T LV+ + + LRELANL ++ G D
Sbjct: 557 N--DEHVGLLSDQSKPIIFSMARLDRVKNLTGLVECYAKNSKLRELANLVIVGGYIDENQ 614
Query: 521 EMXXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEP 579
I++YDL+G+ + ++ E+YR A TKGVF+ PAF E
Sbjct: 615 SRDREEMAEIQKMHSLIEQYDLHGEFRWIAAQMNRARNGELYRYIADTKGVFVQPAFYEA 674
Query: 580 FGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV----ADKQ 635
FGLT++E+ LP AT +GGP +I +G +DP+ VA L+ +
Sbjct: 675 FGLTVVESMTCALPTFATCHGGPAEIIENGVSGFHIDPYHPDQVAATLVSFFETCNTNPN 734
Query: 636 LWARCRQNGLKNIH-LFSWPEHCKTYLSRIAG 666
W + + GLK I+ ++W ++ + L+ +AG
Sbjct: 735 HWVKISEGGLKRIYERYTWKKYSERLLT-LAG 765
|
|
| TAIR|locus:2137829 SUS3 "AT4G02280" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 345 (126.5 bits), Expect = 1.1e-27, P = 1.1e-27
Identities = 136/516 (26%), Positives = 225/516 (43%)
Query: 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTR-QVSAPDVD 226
+V++S HG N+ LG DTGGQV Y+++ RAL ++L R + D+
Sbjct: 281 VVILSPHGYFGQANV-LGLP-DTGGQVVYILDQVRAL-------ETEMLLRIKRQGLDIS 331
Query: 227 WSYGEPTEMLTPRNSDDFMDDMGESSGA---YIIRIPF----GPKDKYIAKELLWPHIPE 279
S T ++ + SG +I+R+PF G K+I++ +WP++
Sbjct: 332 PSILIVTRLIPDAKGTTCNQRLERVSGTEHTHILRVPFRSEKGILRKWISRFDVWPYLEN 391
Query: 280 FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSL 339
+ A + I+ GE G P I G+Y V H+L
Sbjct: 392 YAQDAASEIV------GELQGV-----PDFIIGNYSDGNLVASLMAHRMGVTQCTIAHAL 440
Query: 340 GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGF 399
+ K + + + + Y + A+ ++++ ++ +ITST QEI +
Sbjct: 441 EKTKYPD----SDIYWKDFDNKYHFSCQFTADLIAMNNADFIITSTYQEIAGTKNTVGQY 496
Query: 400 DPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGET--EGN-EDNPA 456
+ L + R V F P+ I+ PG + P + T G+ E+
Sbjct: 497 ESHGAFTLPG-LYRVVHGIDVFDPKFNIVSPGADMTIYFPYSEETRRLTALHGSIEEMLY 555
Query: 457 SPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNR 516
SPD E + ++ KP++ ++AR D KNI+ LV+ + + LREL NL +I GN
Sbjct: 556 SPDQT--DEHVGTLSDRSKPILFSMARLDKVKNISGLVEMYSKNTKLRELVNLVVIAGNI 613
Query: 517 DGIDEMXXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPA 575
D + Y L GQ + ++ E+YR A T+G F PA
Sbjct: 614 DVNKSKDREEIVEIEKMHNLMKNYKLDGQFRWITAQTNRARNGELYRYIADTRGAFAQPA 673
Query: 576 FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP-HDQQS---VADALLKLV 631
F E FGLT++EA GLP AT +GGP +I +G +DP H +Q+ +AD +
Sbjct: 674 FYEAFGLTVVEAMTCGLPTFATCHGGPAEIIEHGLSGFHIDPYHPEQAGNIMADFFERCK 733
Query: 632 ADKQLWARCRQNGLKNIH-LFSWPEHCKTYLSRIAG 666
D W + GL+ I+ ++W + + ++ +AG
Sbjct: 734 EDPNHWKKVSDAGLQRIYERYTWKIYSERLMT-LAG 768
|
|
| TAIR|locus:2206865 SUS6 "sucrose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 346 (126.9 bits), Expect = 1.2e-27, P = 1.2e-27
Identities = 140/537 (26%), Positives = 239/537 (44%)
Query: 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V+ S+HG G+ LG DTGGQV Y+++ RAL +LL R ++ + +
Sbjct: 285 VVIFSVHGYF-GQQDVLGLP-DTGGQVVYILDQVRALEE-------ELLIR-INQQGLGF 334
Query: 228 SYGEPTEMLTPR--------NSDDFMDDMGESSGAYIIRIPF----GPKDKYIAKELLWP 275
+P ++ R D ++ + + ++I+R+PF G +++++ ++P
Sbjct: 335 ---KPQILVVTRLIPEARGTKCDQELEAIEGTKHSHILRVPFVTNKGVLRQWVSRFDIYP 391
Query: 276 HIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFT 335
++ F A + I++ + P I G+Y V
Sbjct: 392 YLERFTQDATSKILQRLDCK-----------PDLIIGNYTDGNLVASLMATKLGVTQGTI 440
Query: 336 GHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRL 395
H+L + K E A+ E++ Y + A+ ++++ ++ +ITST QEI
Sbjct: 441 AHALEKTKYED--SDAKWK--ELDPKYHFSCQFTADLIAMNVTDFIITSTYQEIAGSKDR 496
Query: 396 YDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNED-N 454
++ + + R VS F P+ I PG + P T+ +
Sbjct: 497 PGQYESHTAFTMPG-LCRVVSGIDVFDPKFNIAAPGADQSVYFPYTEKDKRFTKFHPSIQ 555
Query: 455 PASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMG 514
+ +E M + + KP+I ++AR D KNIT LV+ +G+ + LRE+ANL ++ G
Sbjct: 556 ELLYNEKDNAEHMGYLADREKPIIFSMARLDTVKNITGLVEWYGKDKRLREMANLVVVAG 615
Query: 515 NRDGIDEMXXXXXXXXXXXXXXIDKYDLYGQ----VAYPKHHKQSDVPEIYRLAAKTKGV 570
D I+KY L G+ A ++ S E+YR A TKGV
Sbjct: 616 FFDMSKSNDREEKAEIKKMHDLIEKYKLKGKFRWIAAQTDRYRNS---ELYRCIADTKGV 672
Query: 571 FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHD-QQSVA--- 624
F+ PA E FGLT+IEA GLP AT GGP +I ++D +G +DP++ +SV
Sbjct: 673 FVQPALYEAFGLTVIEAMNCGLPTFATNQGGPAEI--IVDGVSGFHIDPNNGDESVTKIG 730
Query: 625 DALLKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTYLSRIAGCKPRHPQWQR-NDD 679
D K +D W + GLK I+ ++W K Y ++ + W++ N+D
Sbjct: 731 DFFSKCRSDGLYWDNISKGGLKRIYECYTW----KIYAEKLLKMGSLYGFWRQVNED 783
|
|
| TAIR|locus:2166203 SUS5 "sucrose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 335 (123.0 bits), Expect = 1.5e-26, P = 1.5e-26
Identities = 131/528 (24%), Positives = 230/528 (43%)
Query: 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V+ S+HG G+ LG DTGGQV Y+++ +AL + R++ +
Sbjct: 274 VVIFSVHGYF-GQTDVLGLP-DTGGQVVYILDQVKALEDEL-LQRINSQGLNFKPQILVV 330
Query: 228 SYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKDKYIAKELLWPHIPEFVDG 283
+ P T N + ++ + + + I+RIPF G +++++ ++P++ F
Sbjct: 331 TRLIPDAKKTKCNQE--LEPIFGTKYSNILRIPFVTENGILRRWVSRFDIYPYLERFTKD 388
Query: 284 ALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDK 343
A I+ ++L GKP I G+Y + H+L + K
Sbjct: 389 ATTKIL---DILE-----GKPD---LIIGNYTDGNLVASLMANKLGITQATIAHALEKTK 437
Query: 344 LEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403
E + + E + Y + A+ +S+++++ +I ST QEI ++ +
Sbjct: 438 YED----SDIKWKEFDPKYHFSSQFTADLISMNSADFIIASTYQEIAGSKERAGQYESHM 493
Query: 404 ERKLRARIKRNVSCYGKFMPRMAIIPPGME---FHHIVPQDGDMDGETEGNEDNPASPDP 460
+ + R VS F PR I PG + + QD ++ S
Sbjct: 494 SFTVPG-LYRVVSGINVFDPRFNIAAPGADDSIYFPFTAQDRRFTKFYTSIDELLYSQSE 552
Query: 461 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGID 520
E + + + +KP+I ++AR D KN+T L + + + + LR+L NL ++ G D
Sbjct: 553 N--DEHIGYLVDKKKPIIFSMARLDVVKNLTGLTEWYAKNKRLRDLVNLVIVGGFFDASK 610
Query: 521 EMXXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEP 579
I+KY L GQ + ++ E+YR A T+G F+ PA E
Sbjct: 611 SKDREEISEIKKMHSLIEKYQLKGQFRWITAQTDRTRNGELYRSIADTRGAFVQPAHYEA 670
Query: 580 FGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHD-QQS---VADALLKLVAD 633
FGLT+IEA + GL AT GGP +I ++D +G +DP + ++S +AD K D
Sbjct: 671 FGLTVIEAMSCGLVTFATNQGGPAEI--IVDGVSGFHIDPSNGEESSDKIADFFEKSGMD 728
Query: 634 KQLWARCRQNGLKNIH-LFSWPEHCKTYLSRIAGCKPRHPQWQR-NDD 679
W GL+ I+ ++W K Y +++ + W+ N D
Sbjct: 729 PDYWNMFSNEGLQRINECYTW----KIYANKVINMGSTYSYWRHLNKD 772
|
|
| TAIR|locus:2180489 SUS1 "AT5G20830" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 332 (121.9 bits), Expect = 6.2e-25, Sum P(2) = 6.2e-25
Identities = 127/506 (25%), Positives = 223/506 (44%)
Query: 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V++S HG +N+ LG DTGGQV Y+++ RAL + + R+ + +
Sbjct: 281 VVILSPHGYFAQDNV-LGYP-DTGGQVVYILDQVRAL-EIEMLQRIKQQGLNIKPRILIL 337
Query: 228 SYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKDKYIAKELLWPHIPEFVDG 283
+ P + T + ++ + +S I+R+PF G K+I++ +WP++ + +
Sbjct: 338 TRLLPDAVGT--TCGERLERVYDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTED 395
Query: 284 ALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDK 343
A + +S L GKP I G+Y V H+L + K
Sbjct: 396 AA---VELSKELN-----GKPD---LIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTK 444
Query: 344 LEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403
+ + +++ Y + A+ +++ ++ +ITST QEI ++
Sbjct: 445 YPD----SDIYWKKLDDKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHT 500
Query: 404 ERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463
L + R V F P+ I+ PG + P + T+ + + +
Sbjct: 501 AFTLPG-LYRVVHGIDVFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVE 559
Query: 464 S-EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEM 522
+ E + + +KP++ +AR D KN++ LV+ +G+ LRELANL ++ G+R +
Sbjct: 560 NKEHLCVLKDKKKPILFTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRK-ESK 618
Query: 523 XXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFG 581
I++Y L GQ + + E+YR TKG F+ PA E FG
Sbjct: 619 DNEEKAEMKKMYDLIEEYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFG 678
Query: 582 LTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH--DQ--QSVADALLKLVADKQLW 637
LT++EA GLP AT GGP +I +G +DP+ DQ ++AD K D W
Sbjct: 679 LTVVEAMTCGLPTFATCKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHW 738
Query: 638 ARCRQNGLKNIH-LFSWPEHCKTYLS 662
+ GL+ I ++W + + L+
Sbjct: 739 DEISKGGLQRIEEKYTWQIYSQRLLT 764
|
|
| UNIPROTKB|P31924 SUS1 "Sucrose synthase 1" [Oryza sativa Japonica Group (taxid:39947)] | Back alignment and assigned GO terms |
|---|
Score = 316 (116.3 bits), Expect = 1.6e-24, P = 1.6e-24
Identities = 126/509 (24%), Positives = 215/509 (42%)
Query: 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227
+V++S HG N+ LG DTGGQV Y+++ RA+ + + R+ ++ +
Sbjct: 284 VVIMSPHGYFAQANV-LGYP-DTGGQVVYILDQVRAMENEM-LLRIKQQGLNITPRILIV 340
Query: 228 SYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKD----KYIAKELLWPHIPEFVDG 283
+ P T ++ + + +I+R+PF ++ K+I++ +WP++ F D
Sbjct: 341 TRLLPDA--TGTTCGQRLEKVLGTEHTHILRVPFRTENGIVRKWISRFEVWPYLETFTDD 398
Query: 284 ALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYXXXXXXXXXXXXXXNVPMLFTGHSLGRDK 343
+ +I G P I G+Y V H+L + K
Sbjct: 399 -----------VAHEIAGELQANPDLIIGNYSDGNLVACLLAHKMGVTHCTIAHALEKTK 447
Query: 344 LEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403
+ L + Y + + ++++ ++ +ITST QEI ++ +
Sbjct: 448 YPN----SDLYWKKFEDHYHFSCQFTTDLIAMNHADFIITSTFQEIAGNKDTVGQYESHM 503
Query: 404 ERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463
+ + R V F P+ I+ PG + P T + + +
Sbjct: 504 AFTMPG-LYRVVHGIDVFDPKFNIVSPGADMSIYFPYSESRKRLTSLHPEIEELLYSEVD 562
Query: 464 SEIMRFFTNPR-KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEM 522
+ +F R KP+I ++AR D KN+T LV+ +G L+EL NL ++ G+ G
Sbjct: 563 NNEHKFMLKDRNKPIIFSMARLDRVKNLTGLVELYGRNPRLQELVNLVVVCGDH-GNPSK 621
Query: 523 XXXXXXXXXXXXXXIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFG 581
I++Y+L G + + + E+YR TKG F+ PAF E FG
Sbjct: 622 DKEEQAEFKKMFDLIEQYNLNGHIRWISAQMNRVRNGELYRYICDTKGAFVQPAFYEAFG 681
Query: 582 LTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALL-----KLVADKQL 636
LT++E+ GLP AT GGP +I +G +DP+ Q A ALL K D
Sbjct: 682 LTVVESMTCGLPTFATAYGGPAEIIVNGVSGFHIDPY-QGDKASALLVEFFEKCQEDPSH 740
Query: 637 WARCRQNGLKNIH-LFSWPEHCKTYLSRI 664
W + Q GL+ I ++W K Y R+
Sbjct: 741 WTKISQGGLQRIEEKYTW----KLYSERL 765
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries 
Original result of BLAST against SWISS-PROT
ID ![]() | Name ![]() | Annotated EC number ![]() | Identity ![]() | Query coverage ![]() | Hit coverage ![]() | RBH(Q2H) ![]() | RBH(H2Q) ![]() |
| Q43876 | SPSA_VICFA | 2, ., 4, ., 1, ., 1, 4 | 0.8168 | 0.9981 | 0.9962 | N/A | no |
| Q94BT0 | SPSA1_ARATH | 2, ., 4, ., 1, ., 1, 4 | 0.7892 | 0.9839 | 0.9971 | yes | no |
| Q9FY54 | SPSA2_ARATH | 2, ., 4, ., 1, ., 1, 4 | 0.7160 | 0.9735 | 0.9828 | no | no |
| P31927 | SPSA_MAIZE | 2, ., 4, ., 1, ., 1, 4 | 0.5641 | 0.9744 | 0.9644 | N/A | no |
| P31928 | SPSA_SPIOL | 2, ., 4, ., 1, ., 1, 4 | 0.7410 | 0.9867 | 0.9876 | N/A | no |
| Q6ZHZ1 | SPSA4_ORYSJ | 2, ., 4, ., 1, ., 1, 4 | 0.6977 | 0.9810 | 0.9727 | yes | no |
| P49031 | SPSA_BETVU | 2, ., 4, ., 1, ., 1, 4 | 0.7708 | 0.9820 | 0.9933 | N/A | no |
| Q43845 | SPSA_SOLTU | 2, ., 4, ., 1, ., 1, 4 | 0.8071 | 0.9933 | 0.9971 | N/A | no |
| A2WYE9 | SPSA1_ORYSI | 2, ., 4, ., 1, ., 1, 4 | 0.5475 | 0.9791 | 0.9547 | N/A | no |
| O22060 | SPSA1_CITUN | 2, ., 4, ., 1, ., 1, 4 | 0.9962 | 1.0 | 1.0 | N/A | no |
| O04933 | SPSA2_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.5758 | 0.9848 | 0.9629 | N/A | no |
| O04932 | SPSA1_CRAPL | 2, ., 4, ., 1, ., 1, 4 | 0.7904 | 0.9886 | 0.9914 | N/A | no |
EC Number Prediction by Ezypred Server 
Original result from Ezypred Server
Fail to connect to Ezypred Server
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING 
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database part I
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1057 | |||
| TIGR02468 | 1050 | TIGR02468, sucrsPsyn_pln, sucrose phosphate syntha | 0.0 | |
| TIGR02472 | 439 | TIGR02472, sucr_P_syn_N, sucrose-phosphate synthas | 1e-178 | |
| cd03800 | 398 | cd03800, GT1_Sucrose_synthase, This family is most | 1e-151 | |
| TIGR02470 | 784 | TIGR02470, sucr_synth, sucrose synthase | 4e-48 | |
| cd03801 | 374 | cd03801, GT1_YqgM_like, This family is most closel | 6e-34 | |
| PLN00142 | 815 | PLN00142, PLN00142, sucrose synthase | 7e-32 | |
| COG0438 | 381 | COG0438, RfaG, Glycosyltransferase [Cell envelope | 2e-26 | |
| pfam00534 | 158 | pfam00534, Glycos_transf_1, Glycosyl transferases | 2e-25 | |
| cd03809 | 365 | cd03809, GT1_mtfB_like, This family is most closel | 5e-24 | |
| cd03798 | 377 | cd03798, GT1_wlbH_like, This family is most closel | 1e-21 | |
| cd03820 | 348 | cd03820, GT1_amsD_like, This family is most closel | 3e-20 | |
| cd03808 | 359 | cd03808, GT1_cap1E_like, This family is most close | 4e-19 | |
| cd03807 | 365 | cd03807, GT1_WbnK_like, This family is most closel | 1e-18 | |
| cd03814 | 364 | cd03814, GT1_like_2, This family is most closely r | 3e-17 | |
| cd01635 | 229 | cd01635, Glycosyltransferase_GTB_type, Glycosyltra | 1e-16 | |
| cd04949 | 372 | cd04949, GT1_gtfA_like, This family is most closel | 2e-16 | |
| cd03811 | 353 | cd03811, GT1_WabH_like, This family is most closel | 6e-16 | |
| cd03821 | 375 | cd03821, GT1_Bme6_like, This family is most closel | 2e-15 | |
| TIGR03449 | 405 | TIGR03449, mycothiol_MshA, D-inositol-3-phosphate | 4e-15 | |
| TIGR02471 | 236 | TIGR02471, sucr_syn_bact_C, sucrose phosphate synt | 4e-15 | |
| cd03817 | 374 | cd03817, GT1_UGDG_like, This family is most closel | 6e-14 | |
| cd03799 | 355 | cd03799, GT1_amsK_like, This is a family of GT1 gl | 7e-13 | |
| TIGR03999 | 374 | TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosamin | 1e-11 | |
| cd04962 | 371 | cd04962, GT1_like_5, This family is most closely r | 1e-11 | |
| pfam05116 | 247 | pfam05116, S6PP, Sucrose-6F-phosphate phosphohydro | 2e-11 | |
| cd03813 | 475 | cd03813, GT1_like_3, This family is most closely r | 2e-11 | |
| cd05844 | 367 | cd05844, GT1_like_7, Glycosyltransferases catalyze | 1e-10 | |
| cd03795 | 357 | cd03795, GT1_like_4, This family is most closely r | 2e-10 | |
| cd03823 | 359 | cd03823, GT1_ExpE7_like, This family is most close | 2e-10 | |
| cd03825 | 365 | cd03825, GT1_wcfI_like, This family is most closel | 7e-10 | |
| TIGR02149 | 388 | TIGR02149, glgA_Coryne, glycogen synthase, Coryneb | 2e-09 | |
| cd04951 | 360 | cd04951, GT1_WbdM_like, This family is most closel | 3e-09 | |
| TIGR03088 | 374 | TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH | 6e-08 | |
| cd03822 | 366 | cd03822, GT1_ecORF704_like, This family is most cl | 7e-08 | |
| cd03819 | 355 | cd03819, GT1_WavL_like, This family is most closel | 7e-08 | |
| TIGR04047 | 373 | TIGR04047, MSMEG_0565_glyc, glycosyltransferase, M | 8e-08 | |
| cd03794 | 394 | cd03794, GT1_wbuB_like, This family is most closel | 3e-07 | |
| cd03805 | 392 | cd03805, GT1_ALG2_like, This family is most closel | 7e-07 | |
| pfam00862 | 550 | pfam00862, Sucrose_synth, Sucrose synthase | 1e-06 | |
| cd03804 | 351 | cd03804, GT1_wbaZ_like, This family is most closel | 1e-06 | |
| cd03796 | 398 | cd03796, GT1_PIG-A_like, This family is most close | 3e-06 | |
| pfam13692 | 134 | pfam13692, Glyco_trans_1_4, Glycosyl transferases | 5e-06 | |
| PRK15484 | 380 | PRK15484, PRK15484, lipopolysaccharide 1,2-N-acety | 1e-05 | |
| cd03812 | 358 | cd03812, GT1_CapH_like, This family is most closel | 5e-05 | |
| cd03802 | 335 | cd03802, GT1_AviGT4_like, This family is most clos | 1e-04 | |
| cd03791 | 476 | cd03791, GT1_Glycogen_synthase_DULL1_like, This fa | 1e-04 | |
| COG0297 | 487 | COG0297, GlgA, Glycogen synthase [Carbohydrate tra | 1e-04 | |
| TIGR02095 | 473 | TIGR02095, glgA, glycogen/starch synthase, ADP-glu | 1e-04 | |
| PLN02871 | 465 | PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoqu | 7e-04 | |
| cd03792 | 372 | cd03792, GT1_Trehalose_phosphorylase, Trehalose ph | 0.001 | |
| pfam13579 | 158 | pfam13579, Glyco_trans_4_4, Glycosyl transferase 4 | 0.003 |
| >gnl|CDD|233879 TIGR02468, sucrsPsyn_pln, sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Score = 2080 bits (5392), Expect = 0.0
Identities = 837/1059 (79%), Positives = 922/1059 (87%), Gaps = 15/1059 (1%)
Query: 1 MAGNDWINSYLEAILDVGPGLDDAKSS--LLLRERGRFSPTRYFVEEVITGFDETDLHRS 58
MAGNDWINSYLEAILDVGPGLDDAKSS LLLRERGRFSPTRYFVEEVITGFDETDLHR+
Sbjct: 1 MAGNDWINSYLEAILDVGPGLDDAKSSALLLLRERGRFSPTRYFVEEVITGFDETDLHRT 60
Query: 59 WVKAQATRSPQERNTRLENMCWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADM 118
WVKA ATRSPQERNTRLENMCWRIWNLAR+KKQLE E AQR+AKRRLERERGRREATADM
Sbjct: 61 WVKAVATRSPQERNTRLENMCWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADM 120
Query: 119 SEDLSEGEKGDIVSDVSAHG--DSTRSRLPRISSVDAMETWISQQKGKKLYIVLISIHGL 176
SEDLSEGEKGD+ D+S G ST+ RLPRISS METW QQK KKLYIVLIS+HGL
Sbjct: 121 SEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEMETWSDQQKEKKLYIVLISLHGL 180
Query: 177 IRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEML 236
+RGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS+PDVDWSYGEPTEML
Sbjct: 181 VRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML 240
Query: 237 TPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLG 296
TPR+S++ D+MGESSGAYIIRIPFGP+DKYI KE LWP+IPEFVDGAL+HI+ MS VLG
Sbjct: 241 TPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLG 300
Query: 297 EQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRD 356
EQIG G PVWP IHGHYADAGDSAALLSGALNVPM+ TGHSLGRDKLEQLLKQ R+S++
Sbjct: 301 EQIGSGHPVWPYVIHGHYADAGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKE 360
Query: 357 EINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVS 416
EIN+TYKIMRRIEAEELSLDASEIVITSTRQEIEEQW LYDGFD +LERKLRAR +R VS
Sbjct: 361 EINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLYDGFDVILERKLRARARRGVS 420
Query: 417 CYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKP 476
CYG+FMPRMA+IPPGMEF HIVP DGDMDGETEGNE++PA PDPPIWSEIMRFFTNPRKP
Sbjct: 421 CYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKP 480
Query: 477 VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 536
+ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD IDEMSS S+SVL SVLKL
Sbjct: 481 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKL 540
Query: 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVA 596
IDKYDLYGQVAYPKHHKQSDVP+IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP+VA
Sbjct: 541 IDKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVA 600
Query: 597 TKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEH 656
TKNGGPVDIHRVLDNGLLVDPHDQQ++ADALLKLVADKQLWA CRQNGLKNIHLFSWPEH
Sbjct: 601 TKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQLWAECRQNGLKNIHLFSWPEH 660
Query: 657 CKTYLSRIAGCKPRHPQWQRN-DDGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGAS 715
CKTYLSRIA C+PRHPQWQR+ DDG E SE +SPGDSLRDIQDISLNL D E + S
Sbjct: 661 CKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSVDGDKESNNGS 720
Query: 716 GNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKH 775
N + ADR +++ENAV +WSK GS+ K Q +GA K+PALRRRK
Sbjct: 721 SNVEGSGPP---ADRVAKIENAVRSWSKS------PKGSSAKAQQGSGAGKYPALRRRKR 771
Query: 776 IFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSD 835
+FVI+VDC LL K I EAV KER EGS GFILSTSMTISEI SFL SG L+P+D
Sbjct: 772 LFVIAVDCYDDKDLLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTD 831
Query: 836 FDAFICNSGSDLYYSTLN-SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKA 894
FDA ICNSGS+LYY +LN SE+G V D YHSHIEYRWGGEGLRKTLV+WA+ + +KK
Sbjct: 832 FDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKG 891
Query: 895 ESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVI 954
E+ E+++ E+ ST++CYAF V+ P PPVKELRK+LRIQ LRCH +YC+NG+R+NVI
Sbjct: 892 ENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLNVI 951
Query: 955 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQI 1014
P+LASRSQALRYL++RWG+EL+ M VFVGESGDTDYEGLLGG+HKTVILKG+ S S Q+
Sbjct: 952 PLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQL 1011
Query: 1015 HANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053
HANRSYPL DV+P+DSPNIVQ ++ DI +L++L
Sbjct: 1012 HANRSYPLDDVVPLDSPNIVQATGGSSSDDISDALKKLS 1050
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. Length = 1050 |
| >gnl|CDD|131525 TIGR02472, sucr_P_syn_N, sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Score = 525 bits (1354), Expect = e-178
Identities = 225/503 (44%), Positives = 299/503 (59%), Gaps = 69/503 (13%)
Query: 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDV 225
LY++L+S+HGLIRG ++ELGRD+DTGGQ KYV+ELARAL V +VDL+TR + V
Sbjct: 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKV 60
Query: 226 DWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGAL 285
Y +P E + P GA I+R+PFGP+ +Y+ KELLWP++ E D L
Sbjct: 61 SPDYAQPIERIAP--------------GARIVRLPFGPR-RYLRKELLWPYLDELADNLL 105
Query: 286 NHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLE 345
H+ + G P IH HYADAG A LS L VP++FTGHSLGR+K
Sbjct: 106 QHL---------RQQGHLPDL---IHAHYADAGYVGARLSRLLGVPLIFTGHSLGREKRR 153
Query: 346 QLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405
+LL L +I Y I RRIEAEE +L + +VITST QEIEEQ+ LYD + P
Sbjct: 154 RLLAAG-LKPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP---- 208
Query: 406 KLRARIKRNVSCYGKFMPRMAIIPPGME---FHHIVPQDGDMDGETEGNEDNPASPDPPI 462
RM +IPPG++ F+ + I
Sbjct: 209 -----------------ERMQVIPPGVDLSRFYPP----------------QSSEETSEI 235
Query: 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEM 522
+ + F +P KP ILA++RPD +KNI +LV+A+G L+E+ANL L++G RD I +M
Sbjct: 236 DNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKM 295
Query: 523 SSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGL 582
S VL VL LID+YDLYG+VAYPKHH+ DVPE+YRLAA+++G+F+NPA EPFGL
Sbjct: 296 ESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGL 355
Query: 583 TLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ 642
TL+EAAA GLPIVAT +GGP DI NGLLVD D +++A AL ++D W +
Sbjct: 356 TLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSR 415
Query: 643 NGLKNIHL-FSWPEHCKTYLSRI 664
NG++ + +SW H + YL +
Sbjct: 416 NGIEGVRRHYSWDAHVEKYLRIL 438
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. Length = 439 |
| >gnl|CDD|99973 cd03800, GT1_Sucrose_synthase, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 453 bits (1169), Expect = e-151
Identities = 165/497 (33%), Positives = 225/497 (45%), Gaps = 100/497 (20%)
Query: 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD 226
I LIS+HG + +DTGGQ YV+ELARAL + + VD+ TR++
Sbjct: 1 RIALISLHGSPLAQPGG----ADTGGQNVYVLELARALARL--GHEVDIFTRRIDDALPP 54
Query: 227 WSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALN 286
P G ++R+P GP +Y+ KE LWP++ EF D L
Sbjct: 55 IVELAP--------------------GVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLR 93
Query: 287 HIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQ 346
+ + P IH HY D+G A LL+ L +P++ T HSLG K
Sbjct: 94 FL------------RREGGRPDLIHAHYWDSGLVALLLARRLGIPLVHTFHSLGAVKRRH 141
Query: 347 LLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406
L TY+ RRIEAEE L A++ VI ST QE EE + LY +
Sbjct: 142 LGAAD---------TYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGAYPR----- 187
Query: 407 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEI 466
R+ ++PPG++ P +
Sbjct: 188 -----------------RIRVVPPGVDLERFTPYGRA-------------------EARR 211
Query: 467 MRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTS 526
R +P KP ILA+ R DP+K I TL++A+ E LRE ANL ++ G RD I M
Sbjct: 212 ARLLRDPDKPRILAVGRLDPRKGIDTLIRAYAELPELRERANLVIVGGPRDDILAMDEEE 271
Query: 527 ASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 586
L L +ID+ D +P + D+P +YR A VF+NPA EPFGLT +E
Sbjct: 272 LRELARELGVIDRVD------FPGRVSREDLPALYRAA----DVFVNPALYEPFGLTALE 321
Query: 587 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 646
A A GLP+VAT GGP DI GLLVDP D +++A AL +L+ D L R + GL+
Sbjct: 322 AMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGLR 381
Query: 647 NIH-LFSWPEHCKTYLS 662
++W L
Sbjct: 382 RARARYTWERVAARLLE 398
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. Length = 398 |
| >gnl|CDD|233881 TIGR02470, sucr_synth, sucrose synthase | Back alignment and domain information |
|---|
Score = 184 bits (469), Expect = 4e-48
Identities = 143/530 (26%), Positives = 245/530 (46%), Gaps = 79/530 (14%)
Query: 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARA-------------LGSMPGVYRVD 214
+V++S HG EN+ LG DTGGQV Y+++ RA L P ++
Sbjct: 258 VVILSPHGYFGQENV-LGLP-DTGGQVVYILDQVRALENEMLQRIKLQGLEITP---KIL 312
Query: 215 LLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKD-----KYIA 269
++TR + PD + + + ++ + + A+I+R+PF ++ +I+
Sbjct: 313 IVTRLI--PDAEGTT-----------CNQRLEKVYGTEHAWILRVPFRTENGIILRNWIS 359
Query: 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALN 329
+ +WP++ F + A I+ GKP I G+Y+D A+LL+ L
Sbjct: 360 RFEIWPYLETFAEDAEKEILA--------ELQGKPD---LIIGNYSDGNLVASLLARKLG 408
Query: 330 VPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEI 389
V H+L + K + + E Y + A+ ++++A++ +ITST QEI
Sbjct: 409 VTQCTIAHALEKTKYPD----SDIYWQEFEDKYHFSCQFTADLIAMNAADFIITSTYQEI 464
Query: 390 ------EEQWRLYDGFD-PVLERKLRARIKRNVSCYGKFMPRMAIIPPGME----FHHIV 438
Q+ + F P L R V F P+ I+ PG + F +
Sbjct: 465 AGTKDSVGQYESHQAFTMPGLYRV--------VHGIDVFDPKFNIVSPGADESIYFPYSD 516
Query: 439 PQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFG 498
+ + E E+ S + E + +P KP+I ++AR D KN+T LV+ +G
Sbjct: 517 KEKRLTNLHPE-IEELLFSLEDN--DEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYG 573
Query: 499 ECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH-KQSDV 557
LREL NL ++ G D + + + + LID+Y L+GQ+ + +
Sbjct: 574 RSPKLRELVNLVVVAGKLDAKESKDREEQAEIEKMHNLIDQYQLHGQIRWIGAQLNRVRN 633
Query: 558 PEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP 617
E+YR A TKG+F+ PA E FGLT++EA GLP AT+ GGP++I + +G +DP
Sbjct: 634 GELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHIDP 693
Query: 618 HDQQSVADALL----KLVADKQLWARCRQNGLKNIH-LFSWPEHCKTYLS 662
+ + A+ ++ K D W + Q GL+ I+ ++W + + L+
Sbjct: 694 YHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLT 743
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 784 |
| >gnl|CDD|99974 cd03801, GT1_YqgM_like, This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Score = 134 bits (339), Expect = 6e-34
Identities = 103/477 (21%), Positives = 175/477 (36%), Gaps = 126/477 (26%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 250
GG ++V+ELARAL + + V +LT E E
Sbjct: 14 GGAERHVLELARALAARG--HEVTVLTPG-------DGGLPDEE---------------E 49
Query: 251 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAI 310
G ++R P + + + LL L ++R +
Sbjct: 50 VGGIVVVRPPPLLRVRRLLLLLLLAL-------RLRRLLRRER-------------FDVV 89
Query: 311 HGHYADAGDSAALLSGALNVPMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIE 369
H H A +AAL + L +P++ T H L +L +L+R + RI
Sbjct: 90 HAHDWLALLAAALAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRI- 148
Query: 370 AEELSLDASEIVIT-STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428
I ++ +TR+E+ E G ++ +I
Sbjct: 149 ----------IAVSEATREELRE-------------------------LGGVPPEKITVI 173
Query: 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKK 488
P G+ + P + R +PVIL + R P+K
Sbjct: 174 PNGV---------------------DTERFRPAPRAARRRLGIPEDEPVILFVGRLVPRK 212
Query: 489 NITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547
+ L++A + R +E ++ L++ G+ +E+ L + L +V
Sbjct: 213 GVDLLLEALAKLR--KEYPDVRLVIVGDGPLREEL-----------EALAAELGLGDRVT 259
Query: 548 YPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI-- 605
+ D+P +Y A VF+ P+ E FGL L+EA A GLP+VA+ GG ++
Sbjct: 260 FLGFVPDEDLPALYAAAD----VFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVE 315
Query: 606 HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 661
GLLV P D +++A+A+L+L+ D +L R + + + FSW
Sbjct: 316 DGE--TGLLVPPGDPEALAEAILRLLDDPELRRRLGEAARERVAERFSWDRVAARTE 370
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in certain bacteria and archaea. Length = 374 |
| >gnl|CDD|215073 PLN00142, PLN00142, sucrose synthase | Back alignment and domain information |
|---|
Score = 133 bits (338), Expect = 7e-32
Identities = 152/552 (27%), Positives = 244/552 (44%), Gaps = 124/552 (22%)
Query: 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARA-------------LGSMPGVYRVD 214
+V+ S HG N+ LG DTGGQV Y+++ RA L P ++
Sbjct: 282 VVIFSPHGYFGQANV-LGL-PDTGGQVVYILDQVRALENEMLLRIKQQGLDIKP---QIL 336
Query: 215 LLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKDKYIAK 270
++TR + PD + G T N ++ + + ++I+R+PF G K+I++
Sbjct: 337 IVTRLI--PD---AKG------TTCNQR--LEKVSGTEHSHILRVPFRTEKGILRKWISR 383
Query: 271 ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNV 330
+WP++ F + A + I+ GKP I G+Y+D A+LL+ L V
Sbjct: 384 FDVWPYLETFAEDAASEIL--------AELQGKPDL---IIGNYSDGNLVASLLAHKLGV 432
Query: 331 PMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIE 390
H+L + K + + + + Y + A+ ++++ ++ +ITST QEI
Sbjct: 433 TQCTIAHALEKTKYPD----SDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTYQEIA 488
Query: 391 E------QWRLYDGFD-PVLERKLRARIKRNVSCYGKFMPRMAIIPPGME----FHHIVP 439
Q+ + F P L R V F P+ I+ PG + F +
Sbjct: 489 GSKDTVGQYESHTAFTLPGLYRV--------VHGIDVFDPKFNIVSPGADMSIYFPYTEK 540
Query: 440 QD--GDMDGETE----GNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTL 493
Q + E E N E + + + +KP+I ++AR D KN+T L
Sbjct: 541 QKRLTSLHPSIEELLYSPEQN---------DEHIGYLKDRKKPIIFSMARLDRVKNLTGL 591
Query: 494 VKAFGECRPLRELANLTLIMGNRDG-----------IDEMSSTSASVLLSVLKLIDKYDL 542
V+ +G+ + LREL NL ++ G D I +M S LI+KY+L
Sbjct: 592 VEWYGKNKRLRELVNLVVVGGFIDPSKSKDREEIAEIKKMHS-----------LIEKYNL 640
Query: 543 YGQVAYPKHHKQSDVP---EIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 599
GQ + Q++ E+YR A TKG F+ PA E FGLT++EA GLP AT
Sbjct: 641 KGQFRWIA--AQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQ 698
Query: 600 GGPVDI--HRVLDNGLLVDPH--DQQS--VADALLKLVADKQLWARCRQNGLKNIH-LFS 652
GGP +I V +G +DP+ D+ + +AD K D W + GL+ I+ ++
Sbjct: 699 GGPAEIIVDGV--SGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYT 756
Query: 653 WPEHCKTYLSRI 664
W K Y R+
Sbjct: 757 W----KIYAERL 764
|
Length = 815 |
| >gnl|CDD|223515 COG0438, RfaG, Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Score = 111 bits (279), Expect = 2e-26
Identities = 51/192 (26%), Positives = 87/192 (45%), Gaps = 16/192 (8%)
Query: 472 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLL 531
K V+L + R DP+K + L++A + + L ++ + +E+
Sbjct: 196 EGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPDIKLVIVGDGPERREEL--------- 246
Query: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 591
KL K L V + + ++ E+ A VF+ P+ E FGL L+EA A G
Sbjct: 247 --EKLAKKLGLEDNVKFLGYVPDEELAELLASAD----VFVLPSLSEGFGLVLLEAMAAG 300
Query: 592 LPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HL 650
P++A+ GG ++ + GLLV P D + +ADAL +L+ D +L + + +
Sbjct: 301 TPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDPELREELGEAARERVEEE 360
Query: 651 FSWPEHCKTYLS 662
FSW + L
Sbjct: 361 FSWERIAEQLLE 372
|
Length = 381 |
| >gnl|CDD|215979 pfam00534, Glycos_transf_1, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 103 bits (258), Expect = 2e-25
Identities = 58/173 (33%), Positives = 94/173 (54%), Gaps = 18/173 (10%)
Query: 475 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSV 533
KP+IL + R P+K + L++AF + NL L++ G+ + ++
Sbjct: 2 KPIILFVGRLVPEKGLDLLLEAFA--LLKEQHPNLKLVIVGDGEEEKKLK---------- 49
Query: 534 LKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP 593
KL K L V + D+ E+YR+A +F+ P+ E FGL L+EA A G+P
Sbjct: 50 -KLALKLGLEDNVIFVGFVPDEDLIELYRIA----DLFVLPSRYEGFGLVLLEAMAAGVP 104
Query: 594 IVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 646
++AT GGP +I + + GLLVDP D +++A+A+ KL+ D++L R +N K
Sbjct: 105 VIATDVGGPAEIVKDGETGLLVDPGDAEALAEAIEKLLKDEELRERLGENARK 157
|
Mutations in this domain of human PIGA lead to disease (Paroxysmal Nocturnal haemoglobinuria). Members of this family transfer activated sugars to a variety of substrates, including glycogen, Fructose-6-phosphate and lipopolysaccharides. Members of this family transfer UDP, ADP, GDP or CMP linked sugars. The eukaryotic glycogen synthases may be distant members of this family. Length = 158 |
| >gnl|CDD|99981 cd03809, GT1_mtfB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 5e-24
Identities = 54/209 (25%), Positives = 95/209 (45%), Gaps = 19/209 (9%)
Query: 454 NPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM 513
+P PP +E++R +P L + +P+KN+ L++AF L +I+
Sbjct: 174 DPRFRPPPAEAEVLRALYLLPRPYFLYVGTIEPRKNLERLLEAFARLPAKGPDPKL-VIV 232
Query: 514 GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFIN 573
G R ++E +L + + L +V + + ++ +YR A F+
Sbjct: 233 GKRGWLNE----------ELLARLRELGLGDRVRFLGYVSDEELAALYRGAR----AFVF 278
Query: 574 PAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL-DNGLLVDPHDQQSVADALLKLVA 632
P+ E FGL ++EA A G P++A+ + V D L DP D +++A A+ +L+
Sbjct: 279 PSLYEGFGLPVLEAMACGTPVIASNISS---LPEVAGDAALYFDPLDPEALAAAIERLLE 335
Query: 633 DKQLWARCRQNGLKNIHLFSWPEHCKTYL 661
D L R+ GL FSW + + L
Sbjct: 336 DPALREELRERGLARAKRFSWEKTARRTL 364
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. Length = 365 |
| >gnl|CDD|99971 cd03798, GT1_wlbH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 1e-21
Identities = 93/357 (26%), Positives = 139/357 (38%), Gaps = 81/357 (22%)
Query: 307 PVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIM 365
P IH H+A G +AALL L +P++ T H ++N +
Sbjct: 94 PDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHG-----------------SDVNLLPRKR 136
Query: 366 RRIEAEELSLDASEIVIT-STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPR 424
+L ++ VI S L +K G +
Sbjct: 137 LLRALLRRALRRADAVIAVS--------------------EALADELKA----LGIDPEK 172
Query: 425 MAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484
+ +IP G++ P D +E + K VIL + R
Sbjct: 173 VTVIPNGVDTERFSPAD---------------------RAEARKLGLPEDKKVILFVGRL 211
Query: 485 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 544
P+K I L++A R +L +I+G DG + + L + L L D+ G
Sbjct: 212 VPRKGIDYLIEALARLLKKRPDVHL-VIVG--DGPLREALEA---LAAELGLEDRVTFLG 265
Query: 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD 604
V +VP Y A VF+ P+ E FGL L+EA A GLP+VAT GG +
Sbjct: 266 AVP------HEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPE 315
Query: 605 IHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYL 661
I +NGLLV P D +++A+A+L+L+AD L R + FSW + L
Sbjct: 316 IITDGENGLLVPPGDPEALAEAILRLLADPWLRLG-RAARRRVAERFSWENVAERLL 371
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. Length = 377 |
| >gnl|CDD|99990 cd03820, GT1_amsD_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 93.0 bits (232), Expect = 3e-20
Identities = 55/205 (26%), Positives = 95/205 (46%), Gaps = 31/205 (15%)
Query: 454 NPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-I 512
NP P S ++ + ILA+ R P+K L++A+ + ++ + L I
Sbjct: 163 NPLPFPPEEPS------SDLKSKRILAVGRLVPQKGFDLLIEAW--AKIAKKHPDWKLRI 214
Query: 513 MGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 572
+G DG + ++ LI + L +V ++ E Y A+ +F+
Sbjct: 215 VG--DGPER---------EALEALIKELGLEDRVIL--LGFTKNIEEYYAKAS----IFV 257
Query: 573 NPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDI--HRVLDNGLLVDPHDQQSVADALLK 629
+ E F + L+EA A GLP+++ GP +I V NGLLV D +++A+ALL+
Sbjct: 258 LTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGV--NGLLVPNGDVEALAEALLR 315
Query: 630 LVADKQLWARCRQNGLKNIHLFSWP 654
L+ D++L R N ++ FS
Sbjct: 316 LMEDEELRKRMGANARESAERFSIE 340
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. Length = 348 |
| >gnl|CDD|99980 cd03808, GT1_cap1E_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 89.9 bits (224), Expect = 4e-19
Identities = 55/178 (30%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLS 532
PV L +AR K I L++A + L L+ G DE + +
Sbjct: 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLLV-G---DGDEENPAAILE--- 238
Query: 533 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 592
I+K L G+V + + DVPE+ A VF+ P++ E L+EA A G
Sbjct: 239 ----IEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEAMAMGR 288
Query: 593 PIVATKNGGPVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 648
P++AT G + V+D NG LV P D +++ADA+ +L+ D +L AR Q K
Sbjct: 289 PVIATDVPGCREA--VIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRA 344
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. Length = 359 |
| >gnl|CDD|99979 cd03807, GT1_WbnK_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 88.4 bits (220), Expect = 1e-18
Identities = 54/164 (32%), Positives = 79/164 (48%), Gaps = 19/164 (11%)
Query: 476 PVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLK 535
+I +AR P+K+ TL++A A L L++G DG D + + L L
Sbjct: 194 FLIGIVARLHPQKDHATLLRAAALLLKKFPNARL-LLVG--DGPDR--ANLELLALKELG 248
Query: 536 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIV 595
L DK L G+ +SDVP + VF+ + E F L+EA A GLP+V
Sbjct: 249 LEDKVILLGE--------RSDVPALLNAL----DVFVLSSLSEGFPNVLLEAMACGLPVV 296
Query: 596 ATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWAR 639
AT G ++ V D G LV P D +++A+A+ L+AD L
Sbjct: 297 ATDVGDNAEL--VGDTGFLVPPGDPEALAEAIEALLADPALRQA 338
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. Length = 365 |
| >gnl|CDD|99985 cd03814, GT1_like_2, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 84.2 bits (209), Expect = 3e-17
Identities = 61/205 (29%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 454 NPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM 513
+P D + + P +PV+L + R P+KN+ L+ A PLR + L++
Sbjct: 180 HPRRRDEALRAR----LGPPDRPVLLYVGRLAPEKNLEALLDAD---LPLRRRPPVRLVI 232
Query: 514 -GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 572
G DG + L+ Y V + ++ Y A VF+
Sbjct: 233 VG--DGPA----------RARLE-----ARYPNVHFLGFLDGEELAAAYASA----DVFV 271
Query: 573 NPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA 632
P+ E FGL ++EA A GLP+VA GGP DI +NGLLV+P D ++ A AL L+A
Sbjct: 272 FPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLA 331
Query: 633 DKQLWARCRQNGLKNIHLFSWPEHC 657
D +L R SW
Sbjct: 332 DPELRRRMAARARAEAERRSWEAFL 356
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 364 |
| >gnl|CDD|99959 cd01635, Glycosyltransferase_GTB_type, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 80.4 bits (198), Expect = 1e-16
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 15/139 (10%)
Query: 477 VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 536
+ + R P+K + L++AF + L + + +L
Sbjct: 106 DKVFVGRLAPEKGLDDLIEAFALLKERGPDLKLVIAGDGPEREYL------------EEL 153
Query: 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVA 596
+ L +V + ++ + AA VF+ P+ E FGL ++EA A GLP++A
Sbjct: 154 LAALLLLDRVIFLGGLDPEELLALLLAAAD---VFVLPSLREGFGLVVLEAMACGLPVIA 210
Query: 597 TKNGGPVDIHRVLDNGLLV 615
T GGP +I GLLV
Sbjct: 211 TDVGGPPEIVEDGLTGLLV 229
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 229 |
| >gnl|CDD|99998 cd04949, GT1_gtfA_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Score = 81.9 bits (203), Expect = 2e-16
Identities = 53/186 (28%), Positives = 99/186 (53%), Gaps = 26/186 (13%)
Query: 472 NPRKPV-ILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASV 529
RKP I+ +AR P+K + L+KAF + ++++ + TL I G D +++
Sbjct: 200 KQRKPHKIITVARLAPEKQLDQLIKAFA--KVVKQVPDATLDIYGYGDEEEKLK------ 251
Query: 530 LLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAA 589
+LI++ L V + + D+ E+Y+ A + + + E FGL+L+EA +
Sbjct: 252 -----ELIEELGLEDYVFLKGYTR--DLDEVYQKA----QLSLLTSQSEGFGLSLMEALS 300
Query: 590 HGLPIVATK-NGGPVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 646
HGLP+++ N GP +I + D NG LV D +++A+A+++L+ D +L + + +
Sbjct: 301 HGLPVISYDVNYGPSEI--IEDGENGYLVPKGDIEALAEAIIELLNDPKLLQKFSEAAYE 358
Query: 647 NIHLFS 652
N +S
Sbjct: 359 NAERYS 364
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 372 |
| >gnl|CDD|99982 cd03811, GT1_WabH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 80.5 bits (199), Expect = 6e-16
Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 20/184 (10%)
Query: 454 NPASPDPPI--WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL 511
NP + E + P PVILA+ R P+K TL++AF R A L +
Sbjct: 166 NPIDIEEIRALAEEPLELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARL-V 224
Query: 512 IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVF 571
I+G DG + L + L +V + QS+ + A +F
Sbjct: 225 ILG--DGPLR---------EELEALAKELGLADRVHFLGF--QSNPYPYLKAAD----LF 267
Query: 572 INPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 631
+ + E F L+EA A G P+VAT GP +I +NGLLV D+ ++A A L L+
Sbjct: 268 VLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALALL 327
Query: 632 ADKQ 635
Sbjct: 328 DLLL 331
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. Length = 353 |
| >gnl|CDD|99991 cd03821, GT1_Bme6_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 79.3 bits (196), Expect = 2e-15
Identities = 49/193 (25%), Positives = 76/193 (39%), Gaps = 21/193 (10%)
Query: 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLS 532
P K +IL L R PKK + L++AF + + L++ G DE +
Sbjct: 201 PDKRIILFLGRLHPKKGLDLLIEAF--AKLAERFPDWHLVIA---GPDEGG------YRA 249
Query: 533 VLKLI-DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHG 591
LK I L +V + D A +F+ P+ E FG+ + EA A G
Sbjct: 250 ELKQIAAALGLEDRVTFTGMLYGEDKAAALADAD----LFVLPSHSENFGIVVAEALACG 305
Query: 592 LPIVATKNGGPVDIHRVLDNG-LLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH- 649
P+V T V +++ G V D ++A AL + + Q +NG +
Sbjct: 306 TPVVTTDK---VPWQELIEYGCGWVVDDDVDALAAALRRALELPQRLKAMGENGRALVEE 362
Query: 650 LFSWPEHCKTYLS 662
FSW + L
Sbjct: 363 RFSWTAIAQQLLE 375
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. Length = 375 |
| >gnl|CDD|132490 TIGR03449, mycothiol_MshA, D-inositol-3-phosphate glycosyltransferase | Back alignment and domain information |
|---|
Score = 78.6 bits (194), Expect = 4e-15
Identities = 107/466 (22%), Positives = 174/466 (37%), Gaps = 96/466 (20%)
Query: 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDM 248
D GG Y++E A L G+ VD+ TR E+
Sbjct: 18 DAGGMNVYILETATELARR-GI-EVDIFTRATRPSQ-----PPVVEV------------- 57
Query: 249 GESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPV 308
+ G + + GP + + KE L + F G L +P +
Sbjct: 58 --APGVRVRNVVAGPYEG-LDKEDLPTQLCAFTGGVL-----------RAEARHEPGYYD 103
Query: 309 AIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRI 368
IH HY +G LL VP++ T H+L K + + + RRI
Sbjct: 104 LIHSHYWLSGQVGWLLRDRWGVPLVHTAHTLAAVK--------NAALADGDTPEPEARRI 155
Query: 369 EAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428
++L +D ++ +I +T +E + R YD DP R+ ++
Sbjct: 156 GEQQL-VDNADRLIANTDEEARDLVRHYDA-DP---------------------DRIDVV 192
Query: 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKK 488
PG + P GD +E R V+ + R P K
Sbjct: 193 APGADLERFRP--GDRA------------------TERARLGLPLDTKVVAFVGRIQPLK 232
Query: 489 NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 548
L++A E NL +I+ + S + + ++++L + + +V +
Sbjct: 233 APDVLLRAVAELLDRDPDRNLRVIV-----VGGPSGSGLATPDALIELAAELGIADRVRF 287
Query: 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG-PVDIHR 607
++ +YR A V P++ E FGL +EA A G P+VA + GG PV +
Sbjct: 288 LPPRPPEELVHVYRAAD----VVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAV-A 342
Query: 608 VLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSW 653
+ GLLVD HD ADAL +L+ D + R +++ FSW
Sbjct: 343 DGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVEHAAGFSW 388
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. Length = 405 |
| >gnl|CDD|131524 TIGR02471, sucr_syn_bact_C, sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Score = 75.6 bits (186), Expect = 4e-15
Identities = 60/227 (26%), Positives = 101/227 (44%), Gaps = 28/227 (12%)
Query: 778 VISVDCDSTTGLLDATKKICEAVEKERTEG-SIGFILSTSMTISEIHSFLVSGHLSPSDF 836
+I D D+T LL + + VE R G ++GF ++T ++ S + PS
Sbjct: 1 LIITDLDNT--LLGDDEGLASFVELLRGSGDAVGFGIATGRSVESAKS-RYAKLNLPSP- 56
Query: 837 DAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAES 896
D I G+++YY E P D ++ HI++ W R+ +V + + +
Sbjct: 57 DVLIARVGTEIYYG---PELQP---DRFWQKHIDHDW----RRQAVVEALADIPGLTLQ- 105
Query: 897 GEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPV 956
EQ Y P P + ++R+ LR Q+ VI G ++V+P+
Sbjct: 106 -----DDQEQGPFKISYLL---DPEGEPILPQIRQRLRQQSQAAKVIL-SCGWFLDVLPL 156
Query: 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003
AS+ ALRYL RWG+ L +++V D E +L G+ V++
Sbjct: 157 RASKGLALRYLSYRWGLPLEQILVAGDSGND---EEMLRGLTLGVVV 200
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. Length = 236 |
| >gnl|CDD|99987 cd03817, GT1_UGDG_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 74.2 bits (183), Expect = 6e-14
Identities = 77/356 (21%), Positives = 143/356 (40%), Gaps = 72/356 (20%)
Query: 310 IHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIE 369
H ++ G ++ L +P++ T H++ D + L+R K+ RR
Sbjct: 90 THTPFS-LGLLGLRVARKLGIPVVATYHTMYEDYTHYVPLGRLLAR--AVVRRKLSRRF- 145
Query: 370 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 429
+ + VI + ++I + R Y +KR + +IP
Sbjct: 146 -----YNRCDAVIAPS-EKIADLLREYG-------------VKRPIE----------VIP 176
Query: 430 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKN 489
G++ P E + +PV+L + R +KN
Sbjct: 177 TGIDLD-------------------RFEPVDGDD-ERRKLGIPEDEPVLLYVGRLAKEKN 216
Query: 490 ITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 548
I L++AF R L+E ++ L++ G DG + +L + L +V +
Sbjct: 217 IDFLIRAF--ARLLKEEPDVKLVIVG--DG---------PEREELEELARELGLADRVIF 263
Query: 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV 608
+ ++P+ Y+ A +F+ + E GL L+EA A GLP+VA G D+
Sbjct: 264 TGFVPREELPDYYKAA----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVAD 319
Query: 609 LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664
+NG L P +++A+ALL+L+ D +L R +N ++ FS+ + + +
Sbjct: 320 GENGFLFPP-GDEALAEALLRLLQDPELRRRLSKNAEESAEKFSFAKKVEKLYEEV 374
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. Length = 374 |
| >gnl|CDD|99972 cd03799, GT1_amsK_like, This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Score = 71.0 bits (175), Expect = 7e-13
Identities = 45/184 (24%), Positives = 79/184 (42%), Gaps = 34/184 (18%)
Query: 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELA---NLTLIMGNRDGIDEMSSTSASV 529
IL++ R KK + L++A L++ L ++ G +
Sbjct: 177 GEPLRILSVGRLVEKKGLDYLLEA---LALLKDRGIDFRLDIV-----GDGPLRD----- 223
Query: 530 LLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLT 583
+ LI + L +V Q +V E+ R A +F+ P+ E +
Sbjct: 224 --ELEALIAELGLEDRVTLLGAKSQEEVRELLRAAD----LFVLPSVTAADGDREGLPVV 277
Query: 584 LIEAAAHGLPIVATKNGGPVDIHRVLD---NGLLVDPHDQQSVADALLKLVADKQLWARC 640
L+EA A GLP+++T G I +++ GLLV P D +++ADA+ +L+ D +L
Sbjct: 278 LMEAMAMGLPVISTDVSG---IPELVEDGETGLLVPPGDPEALADAIERLLDDPELRREM 334
Query: 641 RQNG 644
+ G
Sbjct: 335 GEAG 338
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. Length = 355 |
| >gnl|CDD|234438 TIGR03999, thiol_BshA, N-acetyl-alpha-D-glucosaminyl L-malate synthase BshA | Back alignment and domain information |
|---|
Score = 67.2 bits (165), Expect = 1e-11
Identities = 42/164 (25%), Positives = 77/164 (46%), Gaps = 25/164 (15%)
Query: 486 PKKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 544
P K + +++ F +++ L++ G DG + +L+ + L
Sbjct: 210 PVKRVEDVIEVFAR---VQQEVPAKLLLVG--DGPE---------RSPAEQLVRELGLTD 255
Query: 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG-P- 602
+V + KQ DV E+ ++ +F+ P+ E FGL +EA A G+P++A+ GG P
Sbjct: 256 RVLFLG--KQDDVAELLSIS----DLFLLPSEKESFGLAALEAMACGVPVIASNAGGIPE 309
Query: 603 VDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 646
V H V G L D D +++A+ + L+ D++L R +
Sbjct: 310 VVEHGV--TGFLCDVGDVETMAEYAISLLEDEELLQRFSAAARE 351
|
Members of this protein family are BshA, a glycosyltransferase required for bacillithiol biosynthesis. This enzyme combines UDP-GlcNAc and L-malate to form N-acetyl-alpha-D-glucosaminyl L-malate synthase. Bacillithiol is a low-molecular-weight thiol, an analog of glutathione and mycothiol, and is found largely in the Firmicutes [Biosynthesis of cofactors, prosthetic groups, and carriers, Glutathione and analogs]. Length = 374 |
| >gnl|CDD|100002 cd04962, GT1_like_5, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 1e-11
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 23/165 (13%)
Query: 486 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ 545
P K I +++ F + R +E+ L++G DG E S +L + L
Sbjct: 208 PVKRIDDVIRIFAKVR--KEVPARLLLVG--DG-PERSPA--------ERLARELGLQDD 254
Query: 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG-P-V 603
V + KQ V E+ +A +F+ P+ E FGL +EA A G+P+VA+ GG P V
Sbjct: 255 VLF--LGKQDHVEELLSIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEV 308
Query: 604 DIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 648
H G LVD D +++A+ L L+ D +LW +
Sbjct: 309 VKHGE--TGFLVDVGDVEAMAEYALSLLEDDELWQEFSRAARNRA 351
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 371 |
| >gnl|CDD|218442 pfam05116, S6PP, Sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Score = 65.3 bits (160), Expect = 2e-11
Identities = 43/163 (26%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 837 DAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAES 896
D I + G+++YY V D + H++Y W + + + K
Sbjct: 62 DVLITSVGTEIYYG------PSLVPDQAWQEHLDYGWDRQAVV--------EALAKFPG- 106
Query: 897 GEKVLTP-AEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIP 955
LT E+ + ++ + +KEL ++L + L VIY +G ++++P
Sbjct: 107 ----LTLQPEEEQRPHKVSYFLDPEAAPAVLKELEQLLEKRGLDVKVIY-SSGRDLDILP 161
Query: 956 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 998
+ AS+ QALRYL +WG+ +V G+SG+ D E +GGV
Sbjct: 162 LRASKGQALRYLAKKWGLPPENTLV-CGDSGN-DAELFIGGVR 202
|
This family consists of Sucrose-6F-phosphate phosphohydrolase proteins found in plants and cyanobacteria. Sucrose-6(F)-phosphate phosphohydrolase catalyzes the final step in the pathway of sucrose biosynthesis. Length = 247 |
| >gnl|CDD|99984 cd03813, GT1_like_3, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 67.3 bits (165), Expect = 2e-11
Identities = 48/214 (22%), Positives = 85/214 (39%), Gaps = 32/214 (14%)
Query: 459 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRD 517
DP ++ R PV+ + R P K+I T ++A R +++ + ++G D
Sbjct: 277 DPERFAPARRARPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVR--KKIPDAEGWVIGPTD 334
Query: 518 G----IDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFIN 573
+E +L++ L V K +V E V +
Sbjct: 335 EDPEYAEE-----------CRELVESLGLEDNV---KFTGFQNVKEYLPKL----DVLVL 376
Query: 574 PAFIEPFGLTLIEAAAHGLPIVATKNGG-PVDIHRVLDN-----GLLVDPHDQQSVADAL 627
+ E L ++EA A G+P+VAT G I D G +V P D +++A A+
Sbjct: 377 TSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAI 436
Query: 628 LKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTY 660
L+L+ D +L + G K + ++ +Y
Sbjct: 437 LRLLKDPELRRAMGEAGRKRVERYYTLERMIDSY 470
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria, while some of them are also found in Archaea and eukaryotes. Length = 475 |
| >gnl|CDD|100003 cd05844, GT1_like_7, Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Score = 64.2 bits (157), Expect = 1e-10
Identities = 73/278 (26%), Positives = 107/278 (38%), Gaps = 65/278 (23%)
Query: 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI---IPPG- 431
DA+ TS + +W LY R+ AR +F+ + PP
Sbjct: 116 DAT----TSLALLLRSRWALY-----ARRRRRLARRAALFIAVSQFIRDRLLALGFPPEK 166
Query: 432 MEFHHIVPQDGDMDGETEG-NEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNI 490
+ H I G + P R P IL + R KK
Sbjct: 167 VHVHPI------------GVDTAKFTPATPA-----------RRPPRILFVGRFVEKKGP 203
Query: 491 TTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLK-LIDKYDLYGQVAYP 549
L++AF L +I G DG LL+ L+ L L G+V +
Sbjct: 204 LLLLEAFARLARRVPEVRLVII-G--DG----------PLLAALEALARALGLGGRVTFL 250
Query: 550 KHHKQSDVPEIYRLAAKTKGVFINPAFIEP------FGLTLIEAAAHGLPIVATKNGGPV 603
++V E+ R A +F+ P+ P + L+EA A G+P+VAT++GG
Sbjct: 251 GAQPHAEVRELMRRAR----IFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIP 306
Query: 604 DIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWAR 639
+ V D GLLV D ++A AL +L+AD L AR
Sbjct: 307 EA--VEDGETGLLVPEGDVAALAAALGRLLADPDLRAR 342
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. Length = 367 |
| >gnl|CDD|99969 cd03795, GT1_like_4, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.4 bits (155), Expect = 2e-10
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 5/70 (7%)
Query: 578 EPFGLTLIEAAAHGLPIVATKNGG---PVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 634
E FG+ L+EA A G P+++T+ G V++H V GL+V P D ++A+A+ +L+ D
Sbjct: 276 EAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGV--TGLVVPPGDPAALAEAIRRLLEDP 333
Query: 635 QLWARCRQNG 644
+L R +
Sbjct: 334 ELRERLGEAA 343
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found mainly in bacteria and eukaryotes. Length = 357 |
| >gnl|CDD|99993 cd03823, GT1_ExpE7_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 63.1 bits (154), Expect = 2e-10
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 578 EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLW 637
E F L + EA A G+P++A+ GG ++ R NGLL P D + +A AL +L+ D L
Sbjct: 274 ENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLL 333
Query: 638 ARCRQNGLKNIH 649
R R
Sbjct: 334 ERLRAGIEPPRS 345
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). Length = 359 |
| >gnl|CDD|99994 cd03825, GT1_wcfI_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 61.9 bits (151), Expect = 7e-10
Identities = 31/87 (35%), Positives = 39/87 (44%), Gaps = 10/87 (11%)
Query: 559 EIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH 618
IY A VF+ P+ E F T IEA A G P+VA GG DI G L P
Sbjct: 260 LIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPG 315
Query: 619 DQQSVADALLKLVADKQL------WAR 639
D + +A+ + L+AD AR
Sbjct: 316 DPEDLAEGIEWLLADPDEREELGEAAR 342
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. Length = 365 |
| >gnl|CDD|233748 TIGR02149, glgA_Coryne, glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 2e-09
Identities = 51/204 (25%), Positives = 85/204 (41%), Gaps = 28/204 (13%)
Query: 461 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGID 520
+ R+ + +P IL + R +K + L+ A + + + L G D
Sbjct: 187 DGNVVLDRYGIDRSRPYILFVGRITRQKGVPHLLDAV---HYIPKDVQVVLCAGAPD--- 240
Query: 521 EMSSTSASVLLSVLKLIDKYD--LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIE 578
+ V V + + D G + K + ++ E+ A VF+ P+ E
Sbjct: 241 -----TPEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLSNAE----VFVCPSIYE 291
Query: 579 PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHD------QQSVADALLKL 630
P G+ +EA A G P+VA+ GG ++ V+D G LV P + Q +A A+ L
Sbjct: 292 PLGIVNLEAMACGTPVVASATGGIPEV--VVDGETGFLVPPDNSDADGFQAELAKAINIL 349
Query: 631 VADKQLWARCRQNGLKN-IHLFSW 653
+AD +L + G K FSW
Sbjct: 350 LADPELAKKMGIAGRKRAEEEFSW 373
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 388 |
| >gnl|CDD|100000 cd04951, GT1_WbdM_like, This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 3e-09
Identities = 46/157 (29%), Positives = 73/157 (46%), Gaps = 20/157 (12%)
Query: 477 VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 536
VILA+ R K+ L+KAF + L LI G DG + +T + +L
Sbjct: 190 VILAVGRLVEAKDYPNLLKAFAKLLSDYLDIKL-LIAG--DG--PLRAT-------LERL 237
Query: 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVA 596
I L +V D+ Y A +F+ + E FGL + EA A LP+VA
Sbjct: 238 IKALGLSNRVKLLGLR--DDIAAYYNAA----DLFVLSSAWEGFGLVVAEAMACELPVVA 291
Query: 597 TKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVAD 633
T GG ++ V D+GL+V D +++A+ + +++
Sbjct: 292 TDAGGVREV--VGDSGLIVPISDPEALANKIDEILKM 326
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. The members of this family are found in bacteria. Length = 360 |
| >gnl|CDD|132132 TIGR03088, stp2, sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Score = 55.9 bits (135), Expect = 6e-08
Identities = 45/199 (22%), Positives = 74/199 (37%), Gaps = 27/199 (13%)
Query: 470 FTNPRKPVILALARPDPKKNITTLVKAFG---ECRPLRELANLTLIMGN---RDGIDEMS 523
F V+ + R K+ TLV+AF P +I+G+ R ++M
Sbjct: 189 FFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPARGACEQMV 248
Query: 524 STSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLT 583
+ + + ++ DVP + + +F+ P+ E T
Sbjct: 249 RAAG---------------LAHLVWLPG-ERDDVPALMQ----ALDLFVLPSLAEGISNT 288
Query: 584 LIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643
++EA A GLP++AT GG ++ + G LV P D ++A AL V+D
Sbjct: 289 ILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGAA 348
Query: 644 GLKNIHL-FSWPEHCKTYL 661
G FS Y
Sbjct: 349 GRARAEQQFSINAMVAAYA 367
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. Length = 374 |
| >gnl|CDD|99992 cd03822, GT1_ecORF704_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 7e-08
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 5/75 (6%)
Query: 583 TLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARC 640
L A G P+++T G + VLD GLLV P D ++A+A+ +L+AD +L
Sbjct: 285 VLAYAIGFGKPVISTPVGHAEE---VLDGGTGLLVPPGDPAALAEAIRRLLADPELAQAL 341
Query: 641 RQNGLKNIHLFSWPE 655
R + SW
Sbjct: 342 RARAREYARAMSWER 356
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. Length = 366 |
| >gnl|CDD|99989 cd03819, GT1_WavL_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 55.3 bits (134), Expect = 7e-08
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 21/184 (11%)
Query: 454 NPASPDP-PIWSEIMR-----FFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 507
+ DP + E + + KPVIL R K ++A + ++
Sbjct: 158 DLDRFDPGAVPPERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLK--KDDP 215
Query: 508 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKT 567
++ L++ A +L +LI + L +V + H SD+P Y LA
Sbjct: 216 DVHLLIV--GDAQGRRFYYAELL----ELIKRLGLQDRVTFVGH--CSDMPAAYALAD-- 265
Query: 568 KGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 626
+ ++ + E FG T +EA A G P++A+ +GG + R + GLLV P D +++A A
Sbjct: 266 --IVVSASTEPEAFGRTAVEAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQA 323
Query: 627 LLKL 630
L ++
Sbjct: 324 LDQI 327
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. Length = 355 |
| >gnl|CDD|234448 TIGR04047, MSMEG_0565_glyc, glycosyltransferase, MSMEG_0565 family | Back alignment and domain information |
|---|
Score = 55.5 bits (134), Expect = 8e-08
Identities = 46/163 (28%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 476 PVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMG-----NRDGIDEMSSTSASVL 530
P +LA+ +P+KN L++AF R R A L + G E + +A +
Sbjct: 194 PYVLAVGGIEPRKNTIDLLEAFALLRARRPQAQLVIAGGATLFDYDAYRREFEARAAELG 253
Query: 531 LSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH 590
L ++ + G V +D+P +YR A F P+ E FGL ++EA A
Sbjct: 254 LDPGAVV----ITGPVP------DADLPALYRCAD----AFAFPSLKEGFGLVVLEALAS 299
Query: 591 GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVAD 633
G+P+VA + P + + DP D S+ADAL +
Sbjct: 300 GIPVVA-SDIAPFTEYLGRFDAAWADPSDPDSIADALALALDP 341
|
A conserved gene cluster found sporadically from Actinobacteria to Proteobacteria to Cyanobacteria features a radical SAM protein, an N-acetyltransferase, an oxidoreductase, and two additional proteins whose functional classes are unclear. The metabolic role of the cluster is probably biosynthetic. This glycosyltransferase, named from member MSMEG_0565 from Mycobacterium smegmatis, occurs in most but not all instances of the cluster [Unknown function, Enzymes of unknown specificity]. Length = 373 |
| >gnl|CDD|99968 cd03794, GT1_wbuB_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 3e-07
Identities = 23/79 (29%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 584 LIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643
L E A G P++A+ +G ++ GL+V P D +++A A+L+L+ D + A +N
Sbjct: 316 LFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERAEMGEN 375
Query: 644 GLKNIH-LFSWPEHCKTYL 661
G + + FS + + L
Sbjct: 376 GRRYVEEKFSREKLAERLL 394
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. Length = 394 |
| >gnl|CDD|99977 cd03805, GT1_ALG2_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 52.6 bits (127), Expect = 7e-07
Identities = 49/187 (26%), Positives = 83/187 (44%), Gaps = 18/187 (9%)
Query: 473 PRKPVILALARPDPKKNITTLVKAFGECRP-LRELANLTLIMGNRDGIDEMSSTSASVLL 531
K L++ R + KKNI ++AF + L E N+ L++ G D + + L
Sbjct: 209 SGKKTFLSINRFERKKNIALAIEAFAILKDKLAEFKNVRLVIAG--GYDPRVAENVEYLE 266
Query: 532 SVLKLIDKY-DLYGQVAY----PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 586
+ +L ++ L QV + K+ L + + + P+ E FG+ +E
Sbjct: 267 ELQRLAEELLLLEDQVIFLPSISDSQKEL-------LLSSARALLYTPSN-EHFGIVPLE 318
Query: 587 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 646
A G P++A +GGP++ + G L +P + A+A+LKL D L R G K
Sbjct: 319 AMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMGAAGRK 377
Query: 647 NIH-LFS 652
+ FS
Sbjct: 378 RVKEKFS 384
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. Length = 392 |
| >gnl|CDD|109900 pfam00862, Sucrose_synth, Sucrose synthase | Back alignment and domain information |
|---|
Score = 52.6 bits (126), Expect = 1e-06
Identities = 58/237 (24%), Positives = 104/237 (43%), Gaps = 46/237 (19%)
Query: 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGS----------MPGVYRVDLLT 217
+V++S HG N+ LG DTGGQV Y+++ RAL S + R+ ++T
Sbjct: 275 VVILSPHGYFAQANV-LGY-PDTGGQVVYILDQVRALESEMLVRIKQQGLDITPRILIVT 332
Query: 218 RQVSAPD-VDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPF----GPKDKYIAKEL 272
R + PD V + + E + + +I+R+PF G K+I++
Sbjct: 333 RLL--PDAVGTTCNQRLEKVF------------GTEHTHILRVPFRTEKGILRKWISRFE 378
Query: 273 LWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPM 332
+WP++ F + + +I P I G+Y+D A+LL+ L V
Sbjct: 379 VWPYLETFAEDVAS-----------EIAAELQAKPDLIIGNYSDGNLVASLLAHKLGVTQ 427
Query: 333 LFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEI 389
H+L + K + + + Y + A+ ++++ ++ +ITST QEI
Sbjct: 428 CTIAHALEKTK----YPDSDIYWKKFEKKYHFSCQFTADLIAMNHADFIITSTFQEI 480
|
Sucrose synthases catalyze the synthesis of sucrose from UDP-glucose and fructose. This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family pfam00534. Length = 550 |
| >gnl|CDD|99976 cd03804, GT1_wbaZ_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 51.8 bits (125), Expect = 1e-06
Identities = 29/105 (27%), Positives = 51/105 (48%), Gaps = 12/105 (11%)
Query: 553 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDN- 611
+ SD E+ L A+ + F+ PA E FG+ +EA A G P++A GG ++ V+D
Sbjct: 249 RVSD-EELRDLYARARA-FLFPA-EEDFGIVPVEAMASGTPVIAYGKGGALET--VIDGV 303
Query: 612 -GLLVDPHDQQSVADALLKLVADKQLW-ARCRQNGLKNIHLFSWP 654
G+L + +S+A A+ + ++ R + + FS
Sbjct: 304 TGILFEEQTVESLAAAVERFEKNEDFDPQAIRAHAER----FSES 344
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. Length = 351 |
| >gnl|CDD|99970 cd03796, GT1_PIG-A_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 50.3 bits (121), Expect = 3e-06
Identities = 27/98 (27%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 535 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKG-VFINPAFIEPFGLTLIEAAAHGLP 593
++ +KY+L +V V ++ +G +F+N + E F + ++EAA+ GL
Sbjct: 241 EMREKYNLQDRVELLGAVPHERVRDVLV-----QGHIFLNTSLTEAFCIAIVEAASCGLL 295
Query: 594 IVATKNGGPVDIHRVLDNGL--LVDPHDQQSVADALLK 629
+V+T+ GG I VL + L +P D +S+ L +
Sbjct: 296 VVSTRVGG---IPEVLPPDMILLAEP-DVESIVRKLEE 329
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. Length = 398 |
| >gnl|CDD|222322 pfam13692, Glyco_trans_1_4, Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Score = 47.0 bits (112), Expect = 5e-06
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 551 HHKQSDVPEIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL 609
D+ + A V + P F L L+EA A GLP+VAT + G + L
Sbjct: 57 LGFVEDLAALLASAD----VALAPLRFGAGSPLKLLEALAAGLPVVAT-DIGAEGLPEDL 111
Query: 610 DNGLLVDPHDQQSVADALLKLVAD 633
G+LV D + A+A+++L+AD
Sbjct: 112 GWGVLV-ADDPEEFAEAIVRLLAD 134
|
Length = 134 |
| >gnl|CDD|185381 PRK15484, PRK15484, lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Score = 48.6 bits (116), Expect = 1e-05
Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 41/227 (18%)
Query: 418 YGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPV 477
Y + +P I IVP ++ + N + +P + V
Sbjct: 154 YEERLPNADI--------SIVPNGFCLETYQSNPQPNLRQ----------QLNISPDETV 195
Query: 478 ILALARPDPKKNITTLVKAFGECRPLRELANLTLI-----MGNRDGIDEMSSTSASVLLS 532
+L R P K I L++AF + NL L+ + G E ++ VL +
Sbjct: 196 LLYAGRISPDKGILLLMQAFEKLATAHS--NLKLVVVGDPTASSKG--EKAAYQKKVLEA 251
Query: 533 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 592
++ D+ + G K H Y LA V + E F + +EA A G
Sbjct: 252 AKRIGDRCIMLGGQPPEKMH------NYYPLADL---VVVPSQVEEAFCMVAVEAMAAGK 302
Query: 593 PIVATKNGGPVDIHRVLDNGL---LVDPHDQQSVADALLKLVADKQL 636
P++A+ GG + VL+ L +P S+ + + +AD +L
Sbjct: 303 PVLASTKGGITEF--VLEGITGYHLAEPMTSDSIISDINRTLADPEL 347
|
Length = 380 |
| >gnl|CDD|99983 cd03812, GT1_CapH_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 46.4 bits (111), Expect = 5e-05
Identities = 40/160 (25%), Positives = 59/160 (36%), Gaps = 25/160 (15%)
Query: 450 GNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANL 509
G + + I + K VI + R +KN L++ F E A L
Sbjct: 167 GIDLEKFIFNEEIRKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKL 226
Query: 510 TLIMGN---RDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 566
L+ G+ + I + L L DK G +DVPE+ +
Sbjct: 227 LLV-GDGELEEEIKKKVKE--------LGLEDKVIFLGVR--------NDVPELLQAM-- 267
Query: 567 TKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP-VDI 605
VF+ P+ E L LIEA A GLP + + VD+
Sbjct: 268 --DVFLFPSLYEGLPLVLIEAQASGLPCILSDTITKEVDL 305
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). Length = 358 |
| >gnl|CDD|99975 cd03802, GT1_AviGT4_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-04
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 12/69 (17%)
Query: 578 EPFGLTLIEAAAHGLPIVATKNGG-P--VDIHRVLDNGLLVDPHDQQSVADALLKLVA-D 633
EPFGL +IEA A G P++A + G P V+ G LVD ++ +A A+ + D
Sbjct: 255 EPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVT---GFLVDSVEE--LAAAVARADRLD 309
Query: 634 KQLWARCRQ 642
+ A CR+
Sbjct: 310 R---AACRR 315
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. Length = 335 |
| >gnl|CDD|99965 cd03791, GT1_Glycogen_synthase_DULL1_like, This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Score = 45.6 bits (109), Expect = 1e-04
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 15/95 (15%)
Query: 578 EPFGLTLIEAAAHG-LPIV-ATKNGG----PVDIHRVLD--NGLLVDPHDQQSVADAL-- 627
EP GLT + A +G +PIV AT GG +D + G + + ++ ++ AL
Sbjct: 381 EPCGLTQMYAMRYGTVPIVRAT--GGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRR 438
Query: 628 -LKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYL 661
L L D + W + ++N + FSW K YL
Sbjct: 439 ALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYL 471
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. Length = 476 |
| >gnl|CDD|223374 COG0297, GlgA, Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-04
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 14/104 (13%)
Query: 570 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD--IHRVLD------NGLLVDPHDQQ 621
V + P+ EP GLT + A +G + + GG D + R G L +
Sbjct: 371 VILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFLQTNPD 430
Query: 622 SVADALLKLV----ADKQLWARCRQNGLKNIHLFSWPEHCKTYL 661
+A+AL + + A LW + + N + FSW K Y+
Sbjct: 431 HLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYV 472
|
Length = 487 |
| >gnl|CDD|233724 TIGR02095, glgA, glycogen/starch synthase, ADP-glucose type | Back alignment and domain information |
|---|
Score = 45.3 bits (108), Expect = 1e-04
Identities = 27/104 (25%), Positives = 45/104 (43%), Gaps = 16/104 (15%)
Query: 570 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--------NGLLVDPHDQQ 621
+ P+ EP GLT + A +G + + GG D V+D G L + +D
Sbjct: 368 FILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADT--VVDGDPEAESGTGFLFEEYDPG 425
Query: 622 SVADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYL 661
++ AL + + D LW ++N + FSW + K Y+
Sbjct: 426 ALLAALSRALRLYRQDPSLWEALQKNAMSQD--FSWDKSAKQYV 467
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate [Energy metabolism, Biosynthesis and degradation of polysaccharides]. Length = 473 |
| >gnl|CDD|215469 PLN02871, PLN02871, UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Score = 43.2 bits (102), Expect = 7e-04
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Query: 570 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI---HRVLDNGLLVDPHDQQSVADA 626
VF+ P+ E G ++EA A G+P+VA + GG DI + G L P D +
Sbjct: 334 VFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEK 393
Query: 627 LLKLVADKQLWARCRQNGLKNIHLFSW 653
L L+AD +L R + + + W
Sbjct: 394 LETLLADPELRERMGAAAREEVEKWDW 420
|
Length = 465 |
| >gnl|CDD|99966 cd03792, GT1_Trehalose_phosphorylase, Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Score = 42.2 bits (100), Expect = 0.001
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 23/183 (12%)
Query: 468 RFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGN--RDGIDEMSST 525
++ +P +P I ++R DP K+ ++ A+ + + L +++G+ D +
Sbjct: 183 KYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQL-VLVGSGATDDPE----- 236
Query: 526 SASVLLSVLKL--IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLT 583
V VL+ D D++ P E+ L + V + + E FGLT
Sbjct: 237 GWIVYEEVLEYAEGDP-DIHVLTLPPVSDL-----EVNALQRAST-VVLQKSIREGFGLT 289
Query: 584 LIEAAAHGLPIVATKNGG-PVDI-HRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 641
+ EA G P++A GG P+ I G LVD ++ A +L L+ D +L +
Sbjct: 290 VTEALWKGKPVIAGPVGGIPLQIEDGE--TGFLVDTVEE--AAVRILYLLRDPELRRKMG 345
Query: 642 QNG 644
N
Sbjct: 346 ANA 348
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. Length = 372 |
| >gnl|CDD|222237 pfam13579, Glyco_trans_4_4, Glycosyl transferase 4-like domain | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.003
Identities = 36/206 (17%), Positives = 61/206 (29%), Gaps = 60/206 (29%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 250
GG +YV+ELARAL + + V ++T + P + +D
Sbjct: 1 GGAERYVLELARALAAR--GHEVTVVTPR-----------------GPPGRPELEED--- 38
Query: 251 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAI 310
G + R+P + + + P +
Sbjct: 39 --GVRVHRLPVPRRPSLPGDLRALRRLRRLLRRE---------------------RPDVV 75
Query: 311 HGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEA 370
H H AG A L + VP++ T H L + L ++
Sbjct: 76 HAHGPLAGLLARLAARRRGVPVVVTPHGLALRQGSGLKRRLAR---------------AL 120
Query: 371 EELSLDASEIVITSTRQEIEEQWRLY 396
E L ++ V+ + E E L
Sbjct: 121 ERRLLRRADAVVAVSEAEAELLRALG 146
|
Length = 158 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1057 | |||
| TIGR02468 | 1050 | sucrsPsyn_pln sucrose phosphate synthase/possible | 100.0 | |
| TIGR02470 | 784 | sucr_synth sucrose synthase. This model represents | 100.0 | |
| PLN00142 | 815 | sucrose synthase | 100.0 | |
| TIGR02472 | 439 | sucr_P_syn_N sucrose-phosphate synthase, putative, | 100.0 | |
| PRK14501 | 726 | putative bifunctional trehalose-6-phosphate syntha | 100.0 | |
| PLN03063 | 797 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| PLN02205 | 854 | alpha,alpha-trehalose-phosphate synthase [UDP-form | 100.0 | |
| PLN03064 | 934 | alpha,alpha-trehalose-phosphate synthase (UDP-form | 100.0 | |
| TIGR03449 | 405 | mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-ino | 100.0 | |
| PLN02939 | 977 | transferase, transferring glycosyl groups | 100.0 | |
| PRK00654 | 466 | glgA glycogen synthase; Provisional | 100.0 | |
| cd03800 | 398 | GT1_Sucrose_synthase This family is most closely r | 100.0 | |
| PLN02316 | 1036 | synthase/transferase | 100.0 | |
| PRK10307 | 412 | putative glycosyl transferase; Provisional | 100.0 | |
| KOG0853 | 495 | consensus Glycosyltransferase [Cell wall/membrane/ | 100.0 | |
| PLN02871 | 465 | UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | 100.0 | |
| cd03796 | 398 | GT1_PIG-A_like This family is most closely related | 100.0 | |
| TIGR02095 | 473 | glgA glycogen/starch synthases, ADP-glucose type. | 100.0 | |
| TIGR02149 | 388 | glgA_Coryne glycogen synthase, Corynebacterium fam | 100.0 | |
| PRK14099 | 485 | glycogen synthase; Provisional | 100.0 | |
| PRK14098 | 489 | glycogen synthase; Provisional | 100.0 | |
| cd04962 | 371 | GT1_like_5 This family is most closely related to | 100.0 | |
| TIGR03088 | 374 | stp2 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| PRK15427 | 406 | colanic acid biosynthesis glycosyltransferase WcaL | 100.0 | |
| cd03791 | 476 | GT1_Glycogen_synthase_DULL1_like This family is mo | 100.0 | |
| cd03818 | 396 | GT1_ExpC_like This family is most closely related | 100.0 | |
| cd03805 | 392 | GT1_ALG2_like This family is most closely related | 100.0 | |
| PRK15179 | 694 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| PRK15484 | 380 | lipopolysaccharide 1,2-N-acetylglucosaminetransfer | 100.0 | |
| cd04955 | 363 | GT1_like_6 This family is most closely related to | 100.0 | |
| PRK15490 | 578 | Vi polysaccharide biosynthesis protein TviE; Provi | 100.0 | |
| cd03813 | 475 | GT1_like_3 This family is most closely related to | 100.0 | |
| cd05844 | 367 | GT1_like_7 Glycosyltransferases catalyze the trans | 100.0 | |
| cd03792 | 372 | GT1_Trehalose_phosphorylase Trehalose phosphorylas | 100.0 | |
| cd03819 | 355 | GT1_WavL_like This family is most closely related | 100.0 | |
| cd03814 | 364 | GT1_like_2 This family is most closely related to | 100.0 | |
| cd03795 | 357 | GT1_like_4 This family is most closely related to | 100.0 | |
| cd03816 | 415 | GT1_ALG1_like This family is most closely related | 100.0 | |
| cd03802 | 335 | GT1_AviGT4_like This family is most closely relate | 100.0 | |
| KOG1111 | 426 | consensus N-acetylglucosaminyltransferase complex, | 100.0 | |
| cd03794 | 394 | GT1_wbuB_like This family is most closely related | 100.0 | |
| cd03806 | 419 | GT1_ALG11_like This family is most closely related | 100.0 | |
| PRK09922 | 359 | UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D | 100.0 | |
| PLN02949 | 463 | transferase, transferring glycosyl groups | 100.0 | |
| cd03821 | 375 | GT1_Bme6_like This family is most closely related | 100.0 | |
| PLN02846 | 462 | digalactosyldiacylglycerol synthase | 100.0 | |
| cd03817 | 374 | GT1_UGDG_like This family is most closely related | 100.0 | |
| cd03799 | 355 | GT1_amsK_like This is a family of GT1 glycosyltran | 100.0 | |
| cd03812 | 358 | GT1_CapH_like This family is most closely related | 100.0 | |
| cd03807 | 365 | GT1_WbnK_like This family is most closely related | 100.0 | |
| cd04951 | 360 | GT1_WbdM_like This family is most closely related | 100.0 | |
| PF05116 | 247 | S6PP: Sucrose-6F-phosphate phosphohydrolase; Inter | 100.0 | |
| cd03801 | 374 | GT1_YqgM_like This family is most closely related | 100.0 | |
| cd03809 | 365 | GT1_mtfB_like This family is most closely related | 100.0 | |
| cd03822 | 366 | GT1_ecORF704_like This family is most closely rela | 100.0 | |
| cd03820 | 348 | GT1_amsD_like This family is most closely related | 100.0 | |
| TIGR03087 | 397 | stp1 sugar transferase, PEP-CTERM/EpsH1 system ass | 100.0 | |
| cd03825 | 365 | GT1_wcfI_like This family is most closely related | 100.0 | |
| PRK10125 | 405 | putative glycosyl transferase; Provisional | 100.0 | |
| cd03808 | 359 | GT1_cap1E_like This family is most closely related | 99.98 | |
| cd03823 | 359 | GT1_ExpE7_like This family is most closely related | 99.97 | |
| cd03798 | 377 | GT1_wlbH_like This family is most closely related | 99.97 | |
| PF00862 | 550 | Sucrose_synth: Sucrose synthase; InterPro: IPR0003 | 99.97 | |
| TIGR01485 | 249 | SPP_plant-cyano sucrose-6F-phosphate phosphohydrol | 99.97 | |
| PLN02382 | 413 | probable sucrose-phosphatase | 99.97 | |
| cd03811 | 353 | GT1_WabH_like This family is most closely related | 99.97 | |
| PLN02275 | 371 | transferase, transferring glycosyl groups | 99.97 | |
| TIGR02918 | 500 | accessory Sec system glycosylation protein GtfA. M | 99.97 | |
| cd03804 | 351 | GT1_wbaZ_like This family is most closely related | 99.97 | |
| cd04946 | 407 | GT1_AmsK_like This family is most closely related | 99.97 | |
| PRK10976 | 266 | putative hydrolase; Provisional | 99.96 | |
| PLN02501 | 794 | digalactosyldiacylglycerol synthase | 99.96 | |
| COG0561 | 264 | Cof Predicted hydrolases of the HAD superfamily [G | 99.96 | |
| PRK15126 | 272 | thiamin pyrimidine pyrophosphate hydrolase; Provis | 99.96 | |
| TIGR02400 | 456 | trehalose_OtsA alpha,alpha-trehalose-phosphate syn | 99.96 | |
| PRK10513 | 270 | sugar phosphate phosphatase; Provisional | 99.96 | |
| TIGR02471 | 236 | sucr_syn_bact_C sucrose phosphate synthase, sucros | 99.96 | |
| cd03788 | 460 | GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a | 99.95 | |
| cd03793 | 590 | GT1_Glycogen_synthase_GSY2_like Glycogen synthase, | 99.95 | |
| COG0297 | 487 | GlgA Glycogen synthase [Carbohydrate transport and | 99.95 | |
| PRK03669 | 271 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.95 | |
| PHA01630 | 331 | putative group 1 glycosyl transferase | 99.95 | |
| PLN02887 | 580 | hydrolase family protein | 99.95 | |
| PRK01158 | 230 | phosphoglycolate phosphatase; Provisional | 99.95 | |
| cd04949 | 372 | GT1_gtfA_like This family is most closely related | 99.95 | |
| TIGR01482 | 225 | SPP-subfamily Sucrose-phosphate phosphatase subfam | 99.95 | |
| PRK00726 | 357 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.94 | |
| PF08282 | 254 | Hydrolase_3: haloacid dehalogenase-like hydrolase; | 99.94 | |
| TIGR02398 | 487 | gluc_glyc_Psyn glucosylglycerol-phosphate synthase | 99.94 | |
| PRK10530 | 272 | pyridoxal phosphate (PLP) phosphatase; Provisional | 99.94 | |
| PHA01633 | 335 | putative glycosyl transferase group 1 | 99.94 | |
| TIGR01486 | 256 | HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosph | 99.93 | |
| cd03785 | 350 | GT1_MurG MurG is an N-acetylglucosaminyltransferas | 99.93 | |
| TIGR01133 | 348 | murG undecaprenyldiphospho-muramoylpentapeptide be | 99.93 | |
| TIGR00099 | 256 | Cof-subfamily Cof subfamily of IIB subfamily of ha | 99.93 | |
| PRK10117 | 474 | trehalose-6-phosphate synthase; Provisional | 99.92 | |
| TIGR01487 | 215 | SPP-like sucrose-phosphate phosphatase-like hydrol | 99.92 | |
| PRK00192 | 273 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.91 | |
| KOG1050 | 732 | consensus Trehalose-6-phosphate synthase component | 99.9 | |
| PRK05749 | 425 | 3-deoxy-D-manno-octulosonic-acid transferase; Revi | 99.89 | |
| PRK13609 | 380 | diacylglycerol glucosyltransferase; Provisional | 99.88 | |
| COG0380 | 486 | OtsA Trehalose-6-phosphate synthase [Carbohydrate | 99.88 | |
| PRK10187 | 266 | trehalose-6-phosphate phosphatase; Provisional | 99.87 | |
| PF00982 | 474 | Glyco_transf_20: Glycosyltransferase family 20; In | 99.87 | |
| cd04950 | 373 | GT1_like_1 Glycosyltransferases catalyze the trans | 99.86 | |
| PRK14502 | 694 | bifunctional mannosyl-3-phosphoglycerate synthase/ | 99.86 | |
| TIGR02463 | 221 | MPGP_rel mannosyl-3-phosphoglycerate phosphatase-r | 99.85 | |
| PTZ00174 | 247 | phosphomannomutase; Provisional | 99.85 | |
| PLN02605 | 382 | monogalactosyldiacylglycerol synthase | 99.85 | |
| PRK13608 | 391 | diacylglycerol glucosyltransferase; Provisional | 99.85 | |
| PF00534 | 172 | Glycos_transf_1: Glycosyl transferases group 1; In | 99.84 | |
| TIGR01484 | 204 | HAD-SF-IIB HAD-superfamily hydrolase, subfamily II | 99.83 | |
| KOG1387 | 465 | consensus Glycosyltransferase [Cell wall/membrane/ | 99.82 | |
| TIGR02461 | 225 | osmo_MPG_phos mannosyl-3-phosphoglycerate phosphat | 99.79 | |
| cd01635 | 229 | Glycosyltransferase_GTB_type Glycosyltransferases | 99.78 | |
| PLN02580 | 384 | trehalose-phosphatase | 99.76 | |
| PLN02423 | 245 | phosphomannomutase | 99.76 | |
| COG0438 | 381 | RfaG Glycosyltransferase [Cell envelope biogenesis | 99.76 | |
| PRK12702 | 302 | mannosyl-3-phosphoglycerate phosphatase; Reviewed | 99.75 | |
| TIGR00685 | 244 | T6PP trehalose-phosphatase. At least 18 distinct s | 99.75 | |
| PRK09814 | 333 | beta-1,6-galactofuranosyltransferase; Provisional | 99.75 | |
| KOG2941 | 444 | consensus Beta-1,4-mannosyltransferase [Posttransl | 99.74 | |
| TIGR00236 | 365 | wecB UDP-N-acetylglucosamine 2-epimerase. Epimeras | 99.73 | |
| TIGR02094 | 601 | more_P_ylases alpha-glucan phosphorylases. This fa | 99.7 | |
| cd03786 | 363 | GT1_UDP-GlcNAc_2-Epimerase Bacterial members of th | 99.7 | |
| PLN03017 | 366 | trehalose-phosphatase | 99.69 | |
| PRK00025 | 380 | lpxB lipid-A-disaccharide synthase; Reviewed | 99.69 | |
| COG1877 | 266 | OtsB Trehalose-6-phosphatase [Carbohydrate transpo | 99.63 | |
| PLN02151 | 354 | trehalose-phosphatase | 99.63 | |
| PF02358 | 235 | Trehalose_PPase: Trehalose-phosphatase; InterPro: | 99.57 | |
| TIGR03713 | 519 | acc_sec_asp1 accessory Sec system protein Asp1. Th | 99.56 | |
| cd04299 | 778 | GT1_Glycogen_Phosphorylase_like This family is mos | 99.55 | |
| PF05693 | 633 | Glycogen_syn: Glycogen synthase; InterPro: IPR0086 | 99.5 | |
| PF13692 | 135 | Glyco_trans_1_4: Glycosyl transferases group 1; PD | 99.42 | |
| TIGR00215 | 385 | lpxB lipid-A-disaccharide synthase. Lipid-A precur | 99.39 | |
| PF13579 | 160 | Glyco_trans_4_4: Glycosyl transferase 4-like domai | 99.32 | |
| PRK12446 | 352 | undecaprenyldiphospho-muramoylpentapeptide beta-N- | 99.31 | |
| COG0707 | 357 | MurG UDP-N-acetylglucosamine:LPS N-acetylglucosami | 99.3 | |
| PF13439 | 177 | Glyco_transf_4: Glycosyltransferase Family 4; PDB: | 99.29 | |
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 99.26 | |
| COG3769 | 274 | Predicted hydrolase (HAD superfamily) [General fun | 99.24 | |
| TIGR02919 | 438 | accessory Sec system glycosyltransferase GtfB. Mem | 99.09 | |
| TIGR03492 | 396 | conserved hypothetical protein. This protein famil | 99.04 | |
| cd03784 | 401 | GT1_Gtf_like This family includes the Gtfs, a grou | 99.02 | |
| PF09314 | 185 | DUF1972: Domain of unknown function (DUF1972); Int | 98.99 | |
| PRK11133 | 322 | serB phosphoserine phosphatase; Provisional | 98.85 | |
| PF08323 | 245 | Glyco_transf_5: Starch synthase catalytic domain; | 98.84 | |
| TIGR01670 | 154 | YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-pho | 98.83 | |
| TIGR02726 | 169 | phenyl_P_delta phenylphosphate carboxylase, delta | 98.8 | |
| TIGR01426 | 392 | MGT glycosyltransferase, MGT family. This model de | 98.79 | |
| COG1519 | 419 | KdtA 3-deoxy-D-manno-octulosonic-acid transferase | 98.77 | |
| TIGR03568 | 365 | NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, | 98.74 | |
| PF13528 | 318 | Glyco_trans_1_3: Glycosyl transferase family 1 | 98.62 | |
| TIGR00661 | 321 | MJ1255 conserved hypothetical protein. This model | 98.61 | |
| PRK09484 | 183 | 3-deoxy-D-manno-octulosonate 8-phosphate phosphata | 98.59 | |
| PF13477 | 139 | Glyco_trans_4_2: Glycosyl transferase 4-like | 98.54 | |
| TIGR03590 | 279 | PseG pseudaminic acid biosynthesis-associated prot | 98.47 | |
| smart00775 | 157 | LNS2 LNS2 domain. This domain is found in Saccharo | 98.37 | |
| COG0560 | 212 | SerB Phosphoserine phosphatase [Amino acid transpo | 98.32 | |
| COG4641 | 373 | Uncharacterized protein conserved in bacteria [Fun | 98.3 | |
| PHA03392 | 507 | egt ecdysteroid UDP-glucosyltransferase; Provision | 98.29 | |
| COG0381 | 383 | WecB UDP-N-acetylglucosamine 2-epimerase [Cell env | 98.2 | |
| cd01427 | 139 | HAD_like Haloacid dehalogenase-like hydrolases. Th | 98.2 | |
| KOG3742 | 692 | consensus Glycogen synthase [Carbohydrate transpor | 98.18 | |
| TIGR01457 | 249 | HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydr | 98.18 | |
| KOG3189 | 252 | consensus Phosphomannomutase [Lipid transport and | 98.12 | |
| PLN02448 | 459 | UDP-glycosyltransferase family protein | 98.11 | |
| PF02350 | 346 | Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; | 98.06 | |
| COG1778 | 170 | Low specificity phosphatase (HAD superfamily) [Gen | 98.04 | |
| PF04007 | 335 | DUF354: Protein of unknown function (DUF354); Inte | 98.04 | |
| TIGR01689 | 126 | EcbF-BcbF capsule biosynthesis phosphatase. Due to | 97.91 | |
| PF13844 | 468 | Glyco_transf_41: Glycosyl transferase family 41; P | 97.91 | |
| PLN02208 | 442 | glycosyltransferase family protein | 97.9 | |
| TIGR01684 | 301 | viral_ppase viral phosphatase. These proteins also | 97.89 | |
| PLN03007 | 482 | UDP-glucosyltransferase family protein | 97.84 | |
| COG1819 | 406 | Glycosyl transferases, related to UDP-glucuronosyl | 97.82 | |
| PRK10444 | 248 | UMP phosphatase; Provisional | 97.82 | |
| PLN02670 | 472 | transferase, transferring glycosyl groups | 97.77 | |
| PLN02562 | 448 | UDP-glycosyltransferase | 97.71 | |
| TIGR01491 | 201 | HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPa | 97.68 | |
| COG3914 | 620 | Spy Predicted O-linked N-acetylglucosamine transfe | 97.67 | |
| PHA03398 | 303 | viral phosphatase superfamily protein; Provisional | 97.63 | |
| PRK10017 | 426 | colanic acid biosynthesis protein; Provisional | 97.58 | |
| PLN02410 | 451 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.54 | |
| PLN02863 | 477 | UDP-glucoronosyl/UDP-glucosyl transferase family p | 97.54 | |
| PF11997 | 268 | DUF3492: Domain of unknown function (DUF3492); Int | 97.52 | |
| TIGR00338 | 219 | serB phosphoserine phosphatase SerB. Phosphoserine | 97.51 | |
| PLN02992 | 481 | coniferyl-alcohol glucosyltransferase | 97.46 | |
| COG3980 | 318 | spsG Spore coat polysaccharide biosynthesis protei | 97.35 | |
| PLN00164 | 480 | glucosyltransferase; Provisional | 97.35 | |
| PF03332 | 220 | PMM: Eukaryotic phosphomannomutase; InterPro: IPR0 | 97.33 | |
| TIGR01488 | 177 | HAD-SF-IB Haloacid Dehalogenase superfamily, subfa | 97.3 | |
| PF02684 | 373 | LpxB: Lipid-A-disaccharide synthetase; InterPro: I | 97.29 | |
| COG4671 | 400 | Predicted glycosyl transferase [General function p | 97.28 | |
| PLN02173 | 449 | UDP-glucosyl transferase family protein | 97.26 | |
| PLN00414 | 446 | glycosyltransferase family protein | 97.25 | |
| PLN02554 | 481 | UDP-glycosyltransferase family protein | 97.21 | |
| PLN02764 | 453 | glycosyltransferase family protein | 97.21 | |
| TIGR02137 | 203 | HSK-PSP phosphoserine phosphatase/homoserine phosp | 97.2 | |
| COG0763 | 381 | LpxB Lipid A disaccharide synthetase [Cell envelop | 97.14 | |
| PLN02210 | 456 | UDP-glucosyl transferase | 97.11 | |
| PRK02797 | 322 | 4-alpha-L-fucosyltransferase; Provisional | 96.95 | |
| TIGR01458 | 257 | HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydr | 96.94 | |
| TIGR01106 | 997 | ATPase-IIC_X-K sodium or proton efflux -- potassiu | 96.92 | |
| PF12000 | 171 | Glyco_trans_4_3: Gkycosyl transferase family 4 gro | 96.91 | |
| PF08550 | 29 | DUF1752: Fungal protein of unknown function (DUF17 | 96.9 | |
| PLN02167 | 475 | UDP-glycosyltransferase family protein | 96.88 | |
| PLN02954 | 224 | phosphoserine phosphatase | 96.85 | |
| TIGR01662 | 132 | HAD-SF-IIIA HAD-superfamily hydrolase, subfamily I | 96.84 | |
| PLN02555 | 480 | limonoid glucosyltransferase | 96.81 | |
| TIGR01681 | 128 | HAD-SF-IIIC HAD-superfamily phosphatase, subfamily | 96.77 | |
| PLN02645 | 311 | phosphoglycolate phosphatase | 96.76 | |
| PRK01021 | 608 | lpxB lipid-A-disaccharide synthase; Reviewed | 96.75 | |
| PLN03004 | 451 | UDP-glycosyltransferase | 96.75 | |
| PRK10671 | 834 | copA copper exporting ATPase; Provisional | 96.68 | |
| COG3660 | 329 | Predicted nucleoside-diphosphate-sugar epimerase [ | 96.64 | |
| TIGR01664 | 166 | DNA-3'-Pase DNA 3'-phosphatase. The central phosph | 96.61 | |
| COG0647 | 269 | NagD Predicted sugar phosphatases of the HAD super | 96.56 | |
| PF07429 | 360 | Glyco_transf_56: 4-alpha-L-fucosyltransferase glyc | 96.53 | |
| TIGR01497 | 675 | kdpB K+-transporting ATPase, B subunit. One sequen | 96.45 | |
| PLN02534 | 491 | UDP-glycosyltransferase | 96.44 | |
| TIGR01452 | 279 | PGP_euk phosphoglycolate/pyridoxal phosphate phosp | 96.38 | |
| COG0058 | 750 | GlgP Glucan phosphorylase [Carbohydrate transport | 96.35 | |
| COG1817 | 346 | Uncharacterized protein conserved in archaea [Func | 96.23 | |
| PF06258 | 311 | Mito_fiss_Elm1: Mitochondrial fission ELM1; InterP | 96.2 | |
| PRK13223 | 272 | phosphoglycolate phosphatase; Provisional | 96.14 | |
| PF13344 | 101 | Hydrolase_6: Haloacid dehalogenase-like hydrolase; | 96.12 | |
| PLN03015 | 470 | UDP-glucosyl transferase | 95.93 | |
| PF08288 | 90 | PIGA: PIGA (GPI anchor biosynthesis); InterPro: IP | 95.92 | |
| TIGR01517 | 941 | ATPase-IIB_Ca plasma-membrane calcium-translocatin | 95.91 | |
| TIGR01116 | 917 | ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium | 95.89 | |
| TIGR01525 | 556 | ATPase-IB_hvy heavy metal translocating P-type ATP | 95.88 | |
| PRK11033 | 741 | zntA zinc/cadmium/mercury/lead-transporting ATPase | 95.86 | |
| TIGR01522 | 884 | ATPase-IIA2_Ca golgi membrane calcium-translocatin | 95.82 | |
| PRK13222 | 226 | phosphoglycolate phosphatase; Provisional | 95.79 | |
| TIGR01490 | 202 | HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrol | 95.77 | |
| PLN02152 | 455 | indole-3-acetate beta-glucosyltransferase | 95.75 | |
| TIGR01511 | 562 | ATPase-IB1_Cu copper-(or silver)-translocating P-t | 95.74 | |
| TIGR01524 | 867 | ATPase-IIIB_Mg magnesium-translocating P-type ATPa | 95.73 | |
| TIGR01647 | 755 | ATPase-IIIA_H plasma-membrane proton-efflux P-type | 95.7 | |
| PRK01122 | 679 | potassium-transporting ATPase subunit B; Provision | 95.64 | |
| PF08235 | 157 | LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 | 95.64 | |
| TIGR01657 | 1054 | P-ATPase-V P-type ATPase of unknown pump specifici | 95.62 | |
| PRK13225 | 273 | phosphoglycolate phosphatase; Provisional | 95.56 | |
| PRK10517 | 902 | magnesium-transporting ATPase MgtA; Provisional | 95.56 | |
| PRK14986 | 815 | glycogen phosphorylase; Provisional | 95.54 | |
| PF12038 | 168 | DUF3524: Domain of unknown function (DUF3524); Int | 95.53 | |
| TIGR01523 | 1053 | ATPase-IID_K-Na potassium and/or sodium efflux P-t | 95.52 | |
| TIGR01459 | 242 | HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolas | 95.51 | |
| PRK11590 | 211 | hypothetical protein; Provisional | 95.48 | |
| PRK13226 | 229 | phosphoglycolate phosphatase; Provisional | 95.34 | |
| PRK15122 | 903 | magnesium-transporting ATPase; Provisional | 95.27 | |
| PRK14985 | 798 | maltodextrin phosphorylase; Provisional | 95.27 | |
| TIGR01460 | 236 | HAD-SF-IIA Haloacid Dehalogenase Superfamily Class | 95.16 | |
| PF00343 | 713 | Phosphorylase: Carbohydrate phosphorylase; InterPr | 95.14 | |
| cd04300 | 797 | GT1_Glycogen_Phosphorylase This is a family of oli | 95.0 | |
| COG2217 | 713 | ZntA Cation transport ATPase [Inorganic ion transp | 94.91 | |
| TIGR01489 | 188 | DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopent | 94.87 | |
| PRK14010 | 673 | potassium-transporting ATPase subunit B; Provision | 94.76 | |
| TIGR01672 | 237 | AphA HAD superfamily (subfamily IIIB) phosphatase, | 94.75 | |
| COG0474 | 917 | MgtA Cation transport ATPase [Inorganic ion transp | 94.73 | |
| TIGR01675 | 229 | plant-AP plant acid phosphatase. This model explic | 94.66 | |
| TIGR01685 | 174 | MDP-1 magnesium-dependent phosphatase-1. This mode | 94.64 | |
| PRK14089 | 347 | ipid-A-disaccharide synthase; Provisional | 94.61 | |
| TIGR01512 | 536 | ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translo | 94.59 | |
| TIGR01261 | 161 | hisB_Nterm histidinol-phosphatase. This model desc | 94.49 | |
| TIGR01663 | 526 | PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | 94.44 | |
| PRK10826 | 222 | 2-deoxyglucose-6-phosphatase; Provisional | 94.42 | |
| TIGR01656 | 147 | Histidinol-ppas histidinol-phosphate phosphatase f | 94.4 | |
| PF04464 | 369 | Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate | 94.21 | |
| PHA02530 | 300 | pseT polynucleotide kinase; Provisional | 94.2 | |
| KOG0203 | 1019 | consensus Na+/K+ ATPase, alpha subunit [Inorganic | 94.04 | |
| PRK13288 | 214 | pyrophosphatase PpaX; Provisional | 94.01 | |
| PRK08942 | 181 | D,D-heptose 1,7-bisphosphate phosphatase; Validate | 93.88 | |
| TIGR00213 | 176 | GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | 93.87 | |
| TIGR02093 | 794 | P_ylase glycogen/starch/alpha-glucan phosphorylase | 93.87 | |
| COG4370 | 412 | Uncharacterized protein conserved in bacteria [Fun | 93.81 | |
| PF04101 | 167 | Glyco_tran_28_C: Glycosyltransferase family 28 C-t | 93.74 | |
| TIGR01533 | 266 | lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) famil | 93.73 | |
| KOG1615 | 227 | consensus Phosphoserine phosphatase [Amino acid tr | 93.59 | |
| TIGR01668 | 170 | YqeG_hyp_ppase HAD superfamily (subfamily IIIA) ph | 93.34 | |
| PF00201 | 500 | UDPGT: UDP-glucoronosyl and UDP-glucosyl transfera | 93.33 | |
| PLN02207 | 468 | UDP-glycosyltransferase | 93.33 | |
| PRK08238 | 479 | hypothetical protein; Validated | 93.25 | |
| PLN02575 | 381 | haloacid dehalogenase-like hydrolase | 92.55 | |
| TIGR01686 | 320 | FkbH FkbH-like domain. The C-terminal portion of t | 92.44 | |
| smart00577 | 148 | CPDc catalytic domain of ctd-like phosphatases. | 92.41 | |
| PRK06769 | 173 | hypothetical protein; Validated | 91.87 | |
| COG2179 | 175 | Predicted hydrolase of the HAD superfamily [Genera | 91.73 | |
| PRK05446 | 354 | imidazole glycerol-phosphate dehydratase/histidino | 91.72 | |
| PRK09552 | 219 | mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosp | 91.7 | |
| PF10933 | 364 | DUF2827: Protein of unknown function (DUF2827); In | 91.4 | |
| TIGR01990 | 185 | bPGM beta-phosphoglucomutase. The enzyme from L. l | 90.98 | |
| PRK11009 | 237 | aphA acid phosphatase/phosphotransferase; Provisio | 90.53 | |
| PLN03243 | 260 | haloacid dehalogenase-like hydrolase; Provisional | 90.24 | |
| PF05152 | 297 | DUF705: Protein of unknown function (DUF705); Inte | 90.05 | |
| TIGR02253 | 221 | CTE7 HAD superfamily (subfamily IA) hydrolase, TIG | 89.57 | |
| PF08645 | 159 | PNK3P: Polynucleotide kinase 3 phosphatase; InterP | 89.11 | |
| PLN03190 | 1178 | aminophospholipid translocase; Provisional | 88.82 | |
| PRK11587 | 218 | putative phosphatase; Provisional | 88.66 | |
| KOG0202 | 972 | consensus Ca2+ transporting ATPase [Inorganic ion | 88.55 | |
| TIGR01652 | 1057 | ATPase-Plipid phospholipid-translocating P-type AT | 88.52 | |
| TIGR01456 | 321 | CECR5 HAD-superfamily class IIA hydrolase, TIGR014 | 88.11 | |
| PF12710 | 192 | HAD: haloacid dehalogenase-like hydrolase; PDB: 3P | 87.93 | |
| PF11440 | 355 | AGT: DNA alpha-glucosyltransferase; InterPro: IPR0 | 87.37 | |
| PLN02770 | 248 | haloacid dehalogenase-like hydrolase family protei | 87.08 | |
| COG0637 | 221 | Predicted phosphatase/phosphohexomutase [General f | 86.82 | |
| PF12689 | 169 | Acid_PPase: Acid Phosphatase; InterPro: IPR010036 | 86.68 | |
| COG2327 | 385 | WcaK Polysaccharide pyruvyl transferase family pro | 86.59 | |
| PRK13582 | 205 | thrH phosphoserine phosphatase; Provisional | 86.44 | |
| TIGR01422 | 253 | phosphonatase phosphonoacetaldehyde hydrolase. Thi | 86.05 | |
| TIGR01680 | 275 | Veg_Stor_Prot vegetative storage protein. The prot | 85.86 | |
| COG1703 | 323 | ArgK Putative periplasmic protein kinase ArgK and | 85.81 | |
| TIGR03333 | 214 | salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl | 85.4 | |
| PRK13478 | 267 | phosphonoacetaldehyde hydrolase; Provisional | 84.81 | |
| PF09419 | 168 | PGP_phosphatase: Mitochondrial PGP phosphatase; In | 84.63 | |
| KOG0210 | 1051 | consensus P-type ATPase [Inorganic ion transport a | 83.65 | |
| PTZ00445 | 219 | p36-lilke protein; Provisional | 83.43 | |
| PF06437 | 408 | ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR0 | 83.36 | |
| KOG4626 | 966 | consensus O-linked N-acetylglucosamine transferase | 83.35 | |
| PF03033 | 139 | Glyco_transf_28: Glycosyltransferase family 28 N-t | 83.31 | |
| COG0241 | 181 | HisB Histidinol phosphatase and related phosphatas | 83.27 | |
| PF04413 | 186 | Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid | 83.09 | |
| TIGR01494 | 499 | ATPase_P-type ATPase, P-type (transporting), HAD s | 82.9 | |
| PLN02940 | 382 | riboflavin kinase | 82.35 | |
| COG4359 | 220 | Uncharacterized conserved protein [Function unknow | 81.92 | |
| TIGR02245 | 195 | HAD_IIID1 HAD-superfamily subfamily IIID hydrolase | 80.67 | |
| PF03767 | 229 | Acid_phosphat_B: HAD superfamily, subfamily IIIB ( | 80.1 | |
| COG5083 | 580 | SMP2 Uncharacterized protein involved in plasmid m | 80.01 |
| >TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-210 Score=1906.71 Aligned_cols=1042 Identities=80% Similarity=1.282 Sum_probs=946.1
Q ss_pred CCCchhhhHHHHHHHhcCCCCCccccc--hhhhccCCCCCcchhhhhhhccCCcchhhHHHHHHHhccChhhhhhhhhhh
Q 001541 1 MAGNDWINSYLEAILDVGPGLDDAKSS--LLLRERGRFSPTRYFVEEVITGFDETDLHRSWVKAQATRSPQERNTRLENM 78 (1057)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (1057)
||||||||||||||||+|+|+++++++ +++||+|+||||||||||||||||||||||||+||+|||||||||||||||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (1050)
T TIGR02468 1 MAGNDWINSYLEAILDVGPGLDDAKSSALLLLRERGRFSPTRYFVEEVITGFDETDLHRTWVKAVATRSPQERNTRLENM 80 (1050)
T ss_pred CCcchHHHHHHHHHHhcCCCcccccccccccccccCccCCceeeEEeecccccchhhhhHHHHHHhhcChhhhhhhhhhh
Confidence 999999999999999999999999998 889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhhhhhhhhhHHHHHHHHHHHHHhhccchhhhhhhhccCCCcCCCcccccccCCCC--CCCCCCCCChhhhhhh
Q 001541 79 CWRIWNLARQKKQLEGEAAQRMAKRRLERERGRREATADMSEDLSEGEKGDIVSDVSAHGDS--TRSRLPRISSVDAMET 156 (1057)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 156 (1057)
|||||||||||||||||+|||+||||+|||+||||||+|||||||||||||.+++++.++++ +++||||++|++.|+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (1050)
T TIGR02468 81 CWRIWNLARKKKQLEWEEAQRLAKRRLERERGRREATADMSEDLSEGEKGDVAGDISVAGGEPSTKGRLPRISSNLEMET 160 (1050)
T ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhHhhcCCcccCcccccccccCCCccccccccccccchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999865 4899999999999999
Q ss_pred hhcccCCcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCccccc
Q 001541 157 WISQQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEML 236 (1057)
Q Consensus 157 ~~~~~~~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l 236 (1057)
|+++++.++|||+|||.||+|||+|||+||++|+|||.+||++||++|+++||||+|+|||++..+|.++|+|++|.|++
T Consensus 161 ~~~~~~~~~~~I~liS~HG~~~~~~~elg~~~DtGGq~vYV~ELAraLa~~~gv~~Vdl~TR~~~~~~~~~~y~~p~e~~ 240 (1050)
T TIGR02468 161 WSDQQKEKKLYIVLISLHGLVRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSSPDVDWSYGEPTEML 240 (1050)
T ss_pred chhhcccCceEEEEEccccCccccCcccCCCCCCCChHHHHHHHHHHHHhCCCCCEEEEEeCCcCccccccccCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999998889999999999999
Q ss_pred CCCCCCccccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001541 237 TPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD 316 (1057)
Q Consensus 237 ~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~ 316 (1057)
++.+++.+..++.+.+|++|+|+|+||.++|++|+.+|||+++|++.++.++.++.+.|++++..+++.+|||||+|||+
T Consensus 241 ~~~~~~~~~~~~~~~~g~rIvRip~GP~~~~l~Ke~L~~~l~ef~d~~l~~~~~~~~~~~~~~~~~~~~~pDvIHaHyw~ 320 (1050)
T TIGR02468 241 TPRSSENDGDEMGESSGAYIIRIPFGPRDKYIPKEELWPYIPEFVDGALSHIVNMSKVLGEQIGSGHPVWPYVIHGHYAD 320 (1050)
T ss_pred cccccccccccccCCCCeEEEEeccCCCCCCcCHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhccccCCCCCEEEECcch
Confidence 88888888889999999999999999997799999999999999999999999999999999877777789999999999
Q ss_pred chHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhh
Q 001541 317 AGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1057)
Q Consensus 317 ~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1057)
++++++.+++.+++|+|+|+|+++..+..+++.+|..+...++..|++.+|+.+|+.++..||.|||+|++++++||.+|
T Consensus 321 sG~aa~~L~~~lgVP~V~T~HSLgr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIasT~qE~~eq~~lY 400 (1050)
T TIGR02468 321 AGDSAALLSGALNVPMVLTGHSLGRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITSTRQEIEEQWGLY 400 (1050)
T ss_pred HHHHHHHHHHhhCCCEEEECccchhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEeCHHHHHHHHHHh
Confidence 99999999999999999999999999998888999877788889999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCc
Q 001541 397 DGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKP 476 (1057)
Q Consensus 397 ~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (1057)
++|+|.++++||+|+++||.|||++++++.|||||||++.|.|.+...............+..+.++.++++|+..+++|
T Consensus 401 ~~~~~~~~~~~~~~~~~gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~~~~~~~l~r~~~~pdkp 480 (1050)
T TIGR02468 401 DGFDVILERKLRARARRGVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPDPPIWSEIMRFFTNPRKP 480 (1050)
T ss_pred ccCCchhhhhhhhhhcccccccccCCCCeEEeCCCCcHHHccCCCccccchhcccccccccccchhhHHHHhhcccCCCc
Confidence 99999999999999999999999999999999999999999986543322211111123445678899999999999999
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCc
Q 001541 477 VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSD 556 (1057)
Q Consensus 477 ~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~d 556 (1057)
+|+++||++++||++.||+||..+..+.+.+++++|+|++++.+.+......+..++.++++++++.++|.|+|++++++
T Consensus 481 vIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~lgL~g~V~FlG~v~~ed 560 (1050)
T TIGR02468 481 MILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKYDLYGQVAYPKHHKQSD 560 (1050)
T ss_pred EEEEEcCCccccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHHHHHHHHhCCCCeEEecCCCCHHH
Confidence 99999999999999999999999976556678878889988877777666778899999999999999999999999999
Q ss_pred HHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001541 557 VPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 636 (1057)
Q Consensus 557 l~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1057)
++.+|+.|++++||||+||++||||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++|+++|.++++++++
T Consensus 561 vp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~Dpel 640 (1050)
T TIGR02468 561 VPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVADKQL 640 (1050)
T ss_pred HHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhhCHHH
Confidence 99999999777789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCC-CCCCCCCCCCCCCccchhhhhccccccccCCCCCCC-
Q 001541 637 WARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRND-DGGETSESDSPGDSLRDIQDISLNLKFSLDGEKSGA- 714 (1057)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~~s~~~~l~~~~~~~~~l~~~~~~~~~~~- 714 (1057)
+++|++++++.+++|+|+.++++|++.|..+..++|+|++.. .+.+.++++||.|++++++||| |+||+||+....
T Consensus 641 r~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--l~~~~~~~~~~~~ 718 (1050)
T TIGR02468 641 WAECRQNGLKNIHLFSWPEHCKTYLSRIASCRPRHPQWQRDTDDGEEASEDESPGDSLRDIQDIS--LNLSVDGDKESNN 718 (1050)
T ss_pred HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCcccccccccccccccccCccccccccccch--hhccccccccccc
Confidence 999999999999889999999999999999999999988643 2344567899999999999999 556666654333
Q ss_pred -CCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCcccCcceEEEEEecCCCCCcchHHH
Q 001541 715 -SGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVISVDCDSTTGLLDAT 793 (1057)
Q Consensus 715 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kkLi~~DiDGTL~~~i~~~t 793 (1057)
+.+.+. ..+.+++..++.+++.++++++. ++.++.+++.+.+|||.++++++||++++|++-+....+.+
T Consensus 719 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~~~~~~~l 789 (1050)
T TIGR02468 719 GSSNVEG---SGPPADRVAKIENAVRSWSKSPK------GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDDKDLLQII 789 (1050)
T ss_pred ccccccc---ccchhhHHHHHHHHHhhcccccc------ccccccccccccccCccccccceEEEEEeccCCCCChHHHH
Confidence 222222 12244666777777777775443 67788899999999999999999999444444445577788
Q ss_pred HHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCC-CCCCCccccccchhhcccc
Q 001541 794 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN-SEDGPFVVDFYYHSHIEYR 872 (1057)
Q Consensus 794 ~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~-~~~~~~~~d~~~~~~i~~~ 872 (1057)
++.++++++....+.+.|+|+|||++.++.+++++.++++++||++||++|++|||++.. .++..+.+|..|+.||.++
T Consensus 790 ~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~r 869 (1050)
T TIGR02468 790 KNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYR 869 (1050)
T ss_pred HHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHcc
Confidence 888888874333467999999999999999999999997668999999999999997432 2344788999999999999
Q ss_pred cchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEE
Q 001541 873 WGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRIN 952 (1057)
Q Consensus 873 w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lE 952 (1057)
|.++.+++++.+++....+++...+..++.++...++.||++|++.++...+.+++|++.|++++++|++++|+++++||
T Consensus 870 W~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~k~SY~v~d~~~~~~v~elr~~Lr~~gLr~~~iys~~~~~LD 949 (1050)
T TIGR02468 870 WGGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDHCYAFKVKDPSKVPPVKELRKLLRIQGLRCHAVYCRNGTRLN 949 (1050)
T ss_pred CCcHHHHHHHHHHhhhcccccccccccceecChhhCCCceEEEEecCcccCccHHHHHHHHHhCCCceEEEeecCCcEee
Confidence 99999999999999877677766666788899999999999999888888889999999999999999999999866999
Q ss_pred EecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCC
Q 001541 953 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPN 1032 (1057)
Q Consensus 953 I~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~ 1032 (1057)
|+|.++|||+||+||+.+|||++++|+||+||++||||++||.+.+++|+|++.++...+++|+++||+++||||+||||
T Consensus 950 VlP~~ASKgqAlRyL~~rwgi~l~~v~VfaGdSGntD~e~Ll~G~~~tvi~~g~~~~~s~~l~~~~sY~~eDVvp~dspn 1029 (1050)
T TIGR02468 950 VIPLLASRSQALRYLFVRWGIELANMAVFVGESGDTDYEGLLGGLHKTVILKGVVSRGSEQLHANRSYPLDDVVPLDSPN 1029 (1050)
T ss_pred eeeCCCCHHHHHHHHHHHcCCChHHeEEEeccCCCCCHHHHhCCceeEEEEecccccchhhhcccCCCcccccccCCCCC
Confidence 99999999999999999999999999999999999999999999999999999986555677899999999999999999
Q ss_pred eEEccCCCChHHHHHHHHHhC
Q 001541 1033 IVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 1033 ~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
|.+++++|..++|..||++||
T Consensus 1030 i~~~~~~~~~~di~~aL~~l~ 1050 (1050)
T TIGR02468 1030 IVQATGGSSSDDISDALKKLS 1050 (1050)
T ss_pred eEeecCCCCHHHHHHHHHhcC
Confidence 999999999999999999986
|
Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein. |
| >TIGR02470 sucr_synth sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-56 Score=542.54 Aligned_cols=461 Identities=28% Similarity=0.482 Sum_probs=354.4
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHH--------hcCCCee----eEEEEecCCCCCCCCCccC
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARAL--------GSMPGVY----RVDLLTRQVSAPDVDWSYG 230 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aL--------a~~Ggv~----~V~vit~~~~~~~~~~~y~ 230 (1057)
+|.|||+|||.||+++.++. +|+ ||+|||..||.+||++| +++| | +|+|+||...+.. ...+.
T Consensus 253 p~~~rIa~lS~Hg~~~~~~~-lG~-~DtGGq~vYV~elaraL~~~~~~~La~~G--~~v~~~V~I~TR~~~~~~-~~~~~ 327 (784)
T TIGR02470 253 PMVFNVVILSPHGYFGQENV-LGL-PDTGGQVVYILDQVRALENEMLQRIKLQG--LEITPKILIVTRLIPDAE-GTTCN 327 (784)
T ss_pred CccceEEEEecccccCCccc-cCC-CCCCCceeHHHHHHHHHHHHHHHHHHhcC--CCccceEEEEecCCCCcc-ccccc
Confidence 57899999999999888884 997 79999999999999985 6888 8 8889999974322 23445
Q ss_pred CcccccCCCCCCccccccCCCCCeEEEEccCCCcc-----cccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCC
Q 001541 231 EPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKD-----KYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPV 305 (1057)
Q Consensus 231 ~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~-----~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~ 305 (1057)
++.|. +...++++|+|+|++|.. +|++|+.+|||+..|.+.+..++.+. ...
T Consensus 328 ~~~e~------------~~~~~~~~I~rvp~g~~~~~~~~~~i~k~~l~p~l~~f~~~~~~~~~~~-----------~~~ 384 (784)
T TIGR02470 328 QRLEK------------VYGTEHAWILRVPFRTENGIILRNWISRFEIWPYLETFAEDAEKEILAE-----------LQG 384 (784)
T ss_pred ccccc------------ccCCCceEEEEecCCCCcccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCC
Confidence 55433 344579999999999842 57899999999999999888776531 124
Q ss_pred cceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 306 WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 306 ~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
+||+||+|||+++++|..+++.+++|+++|.|+++..+.. ..|. .+..+...|++..++.+|..++..||.||++|
T Consensus 385 ~pDlIHahy~d~glva~lla~~lgVP~v~t~HsL~~~K~~---~~g~-~~~~~e~~~~~~~r~~ae~~~~~~AD~IItsT 460 (784)
T TIGR02470 385 KPDLIIGNYSDGNLVASLLARKLGVTQCTIAHALEKTKYP---DSDI-YWQEFEDKYHFSCQFTADLIAMNAADFIITST 460 (784)
T ss_pred CCCEEEECCCchHHHHHHHHHhcCCCEEEECCcchhhccc---cccc-ccccchhHHHhhhhhhHHHHHHhcCCEEEECc
Confidence 6999999999999999999999999999999999776632 2222 34445668888889989999999999999999
Q ss_pred HHHHH------HHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC-
Q 001541 386 RQEIE------EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP- 458 (1057)
Q Consensus 386 ~~~~~------~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~- 458 (1057)
.+++. .+|+.|..|... . ..++..| .+.+.+|+.|||||+|...|.|....... ...........
T Consensus 461 ~qEi~~~~~~v~qY~s~~~ft~p--~--Ly~vvnG---id~~~~Ki~VVpPGVD~~iF~P~~~~~~r-~~~~~~~ie~ll 532 (784)
T TIGR02470 461 YQEIAGTKDSVGQYESHQAFTMP--G--LYRVVHG---IDVFDPKFNIVSPGADESIYFPYSDKEKR-LTNLHPEIEELL 532 (784)
T ss_pred HHHhhhhhhhhhhhhhccccccc--c--eeeeecC---ccCCcCCeEEECCCcChhhcCCCCchhhh-hhhhhcchhhhc
Confidence 98866 355555544321 0 0112222 22366799999999999999875432100 00000000000
Q ss_pred -CCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCC-CcccchhhHHHHHHHHHH
Q 001541 459 -DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDG-IDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 459 -~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~-~~~~~~~~~~~~~~l~~l 536 (1057)
.+....+...++..+++|+|+++||+++.||++.|++||.++..+++..++ +|+|++.+ ......+......++..+
T Consensus 533 ~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~~~~L-VIVGGg~~~~~s~d~ee~~~i~~L~~l 611 (784)
T TIGR02470 533 FSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRELVNL-VVVAGKLDAKESKDREEQAEIEKMHNL 611 (784)
T ss_pred cchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCCCeEE-EEEeCCcccccccchhHHHHHHHHHHH
Confidence 000111122233367899999999999999999999999988655555555 45665532 222222333467889999
Q ss_pred HHHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEe
Q 001541 537 IDKYDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 615 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 615 (1057)
++++++.++|.|+|.. +..++.++|+.++..+||||+||++|+||++++||||||+|||+|+.||+.|+|.++.+|++|
T Consensus 612 a~~~gL~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG~~EiV~dg~tGfLV 691 (784)
T TIGR02470 612 IDQYQLHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGGPLEIIQDGVSGFHI 691 (784)
T ss_pred HHHhCCCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCcEEEe
Confidence 9999999999999975 667899999864434479999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHH----hCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 001541 616 DPHDQQSVADALLKLV----ADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll----~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~ 664 (1057)
+|.|+++++++|.+++ .|++.|++++++|++++ ++|||+.++++++.+.
T Consensus 692 dp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 692 DPYHGEEAAEKIVDFFEKCDEDPSYWQKISQGGLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred CCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999876 69999999999999999 7999999999999887
|
This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria. |
| >PLN00142 sucrose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.5e-56 Score=534.69 Aligned_cols=456 Identities=28% Similarity=0.472 Sum_probs=348.5
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHH--------HHHhcCCCeeeE----EEEecCCCCCCCCCccC
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELA--------RALGSMPGVYRV----DLLTRQVSAPDVDWSYG 230 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA--------~aLa~~Ggv~~V----~vit~~~~~~~~~~~y~ 230 (1057)
+|-|||+|||.||++++.+ ++|+ ||||||..||.++| ++|+++| |+| +|+||...+.. ...|.
T Consensus 277 p~~~~i~~iS~Hg~~~~~~-~lG~-~DtGGQ~vYVl~~aral~~el~~~l~~~G--~~v~~~v~i~TR~i~~~~-~~~~~ 351 (815)
T PLN00142 277 PMVFNVVIFSPHGYFGQAN-VLGL-PDTGGQVVYILDQVRALENEMLLRIKQQG--LDIKPQILIVTRLIPDAK-GTTCN 351 (815)
T ss_pred hHhHhhheecccccccccc-cCCC-CCCCCceehHHHHHHHHHHHHHHHHHhcC--CCccceeEEEEeccCCcc-CCccc
Confidence 4668999999999999999 5997 99999999998766 5677788 866 59999885443 45556
Q ss_pred CcccccCCCCCCccccccCCCCCeEEEEccCCCcc----cccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCc
Q 001541 231 EPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKD----KYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVW 306 (1057)
Q Consensus 231 ~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~----~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~ 306 (1057)
++.|.+ ...++++|+|+|+||.+ ++++|+.+|||+..|.+.+..++.+. ...+
T Consensus 352 ~~~e~v------------~~~~~~~I~rvP~g~~~~~l~~~i~ke~l~p~L~~f~~~~~~~~~~~-----------~~~~ 408 (815)
T PLN00142 352 QRLEKV------------SGTEHSHILRVPFRTEKGILRKWISRFDVWPYLETFAEDAASEILAE-----------LQGK 408 (815)
T ss_pred Ccceec------------cCCCceEEEecCCCCCccccccccCHHHHHHHHHHHHHHHHHHHHHh-----------cCCC
Confidence 655443 44579999999999952 56799999999999999988776531 1246
Q ss_pred ceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCH
Q 001541 307 PVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTR 386 (1057)
Q Consensus 307 pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~ 386 (1057)
||+||+|||++|++|..+++.+|+|+|+|+|+++..+.. . +...+......|++..|+.+|..++..||.||++|.
T Consensus 409 PDlIHaHYwdsg~vA~~La~~lgVP~v~T~HsL~k~K~~---~-~~~~~~~~e~~y~~~~r~~aE~~a~~~Ad~IIasT~ 484 (815)
T PLN00142 409 PDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKYP---D-SDIYWKKFDDKYHFSCQFTADLIAMNHADFIITSTY 484 (815)
T ss_pred CCEEEECCccHHHHHHHHHHHhCCCEEEEcccchhhhcc---c-cCCcccccchhhhhhhchHHHHHHHHhhhHHHhCcH
Confidence 999999999999999999999999999999999877752 2 223455567788999999999999999999999999
Q ss_pred HHHH------HHHhhhCCCC-hHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCC------CCCCCCCC
Q 001541 387 QEIE------EQWRLYDGFD-PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMD------GETEGNED 453 (1057)
Q Consensus 387 ~~~~------~~~~~y~~~~-~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~------~~~~~~~~ 453 (1057)
+++. .||..|..|. |. | +|+-.|+ +.+.+++.|||||+|...|.|...... ..+.....
T Consensus 485 qEi~g~~~~i~qy~sh~~f~~p~----L-~rvv~GI---d~~~~ki~VVppGvD~~~F~P~~~~~~rl~~l~n~I~~~l~ 556 (815)
T PLN00142 485 QEIAGSKDTVGQYESHTAFTLPG----L-YRVVHGI---DVFDPKFNIVSPGADMSIYFPYTEKQKRLTSLHPSIEELLY 556 (815)
T ss_pred HHHhcccchhhhhhcccccccch----h-hhhhccc---cccccCeeEECCCCChhhcCCCChHHhhHHhhcccchhhcC
Confidence 9886 3555554443 22 2 4454444 335669999999999999886542110 00011000
Q ss_pred CCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCC-CCcccchhhHHHHHH
Q 001541 454 NPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRD-GIDEMSSTSASVLLS 532 (1057)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~-~~~~~~~~~~~~~~~ 532 (1057)
.+....+...++..+++|+|+++||+++.||++.||+|++++..+++..++ +|+|++. .......+......+
T Consensus 557 -----~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~~L-VIVGgg~d~~~s~d~ee~~el~~ 630 (815)
T PLN00142 557 -----SPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELVNL-VVVGGFIDPSKSKDREEIAEIKK 630 (815)
T ss_pred -----ChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCcEE-EEEECCccccccccHHHHHHHHH
Confidence 011111112222356788999999999999999999999988654444444 4667652 211111112234577
Q ss_pred HHHHHHHcCCCCCEEeCCCCC-CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCc
Q 001541 533 VLKLIDKYDLYGQVAYPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDN 611 (1057)
Q Consensus 533 l~~l~~~~~l~~~V~f~g~v~-~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~ 611 (1057)
+.++++++++.++|.|+|.+. ..+..++|+..+...|+||+||++|+||++++||||||+|||+|+.||+.|+|.++.+
T Consensus 631 L~~La~~lgL~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLvvLEAMA~GlPVVATdvGG~~EIV~dG~t 710 (815)
T PLN00142 631 MHSLIEKYNLKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLTVVEAMTCGLPTFATCQGGPAEIIVDGVS 710 (815)
T ss_pred HHHHHHHcCCCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHHHHHHHHcCCCEEEcCCCCHHHHhcCCCc
Confidence 889999999999999998654 2333444442111129999999999999999999999999999999999999999999
Q ss_pred eEEeCCCCHHHHHHHHHHH----HhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 001541 612 GLLVDPHDQQSVADALLKL----VADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 612 Gllv~p~d~~~la~aI~~l----l~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~ 664 (1057)
|++|+|+|+++++++|.++ +.|++.|++++++|++++ ++|||+.++++++++.
T Consensus 711 G~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~mg~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 711 GFHIDPYHGDEAANKIADFFEKCKEDPSYWNKISDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred EEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999998765 469999999999999999 7999999999999977
|
|
| >TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-53 Score=502.29 Aligned_cols=438 Identities=51% Similarity=0.872 Sum_probs=345.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
+||++||.||+++++++.+|++|+.||+++|+.+|+++|+++|++|+|+|+|+....+.+...|..+.+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~p~~GG~~~~v~~La~~L~~~G~~~~V~v~t~~~~~~~~~~~~~~~~~----------- 69 (439)
T TIGR02472 1 LYLLLLSLHGLIRGHDLELGRDADTGGQTKYVLELARALARRSEVEQVDLVTRLIKDAKVSPDYAQPIE----------- 69 (439)
T ss_pred CeEEEEeCCcCCCCCccccCCCCCCCCcchHHHHHHHHHHhCCCCcEEEEEeccccCcCCCCccCCCee-----------
Confidence 589999999999999999999999999999999999999999943499999986432222223322221
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
...+|++++|+|+++. .+..+..+|+++..|...++..+.+. ..+|||||+|++.++.++.+++
T Consensus 70 ---~~~~gv~v~r~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~------------~~~~DvIH~h~~~~~~~~~~~~ 133 (439)
T TIGR02472 70 ---RIAPGARIVRLPFGPR-RYLRKELLWPYLDELADNLLQHLRQQ------------GHLPDLIHAHYADAGYVGARLS 133 (439)
T ss_pred ---EeCCCcEEEEecCCCC-CCcChhhhhhhHHHHHHHHHHHHHHc------------CCCCCEEEEcchhHHHHHHHHH
Confidence 1136999999998776 45566667777766665555444320 1369999999988889999999
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+.+++|+|+|.|+++......+...+. ....+...|.+..++..|+.+++.+|.||++|.+++.+++..+.++.+
T Consensus 134 ~~~~~p~V~t~H~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~---- 208 (439)
T TIGR02472 134 RLLGVPLIFTGHSLGREKRRRLLAAGL-KPQQIEKQYNISRRIEAEEETLAHASLVITSTHQEIEEQYALYDSYQP---- 208 (439)
T ss_pred HHhCCCEEEecccccchhhhhcccCCC-ChhhhhhhcchHHHHHHHHHHHHhCCEEEECCHHHHHHHHHhccCCCc----
Confidence 999999999999875543222222222 222233445556666678899999999999998776665544433333
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.++.|||||||.+.|.|..... ........+++++..+++++|+++||+.
T Consensus 209 -----------------~ki~vIpnGvd~~~f~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~vGrl~ 258 (439)
T TIGR02472 209 -----------------ERMQVIPPGVDLSRFYPPQSSE-------------ETSEIDNLLAPFLKDPEKPPILAISRPD 258 (439)
T ss_pred -----------------cceEEECCCcChhhcCCCCccc-------------cchhHHHHHHhhccccCCcEEEEEcCCc
Confidence 3899999999999987643110 1112233445555667789999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
+.||++.||+||..+....+.+++++|+|++++.+.+.....++..++..+++++++.++|.|+|+++.++++.+|+.|+
T Consensus 259 ~~Kg~~~li~A~~~l~~~~~~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~~~l~~~V~f~g~~~~~~~~~~~~~a~ 338 (439)
T TIGR02472 259 RRKNIPSLVEAYGRSPKLQEMANLVLVLGCRDDIRKMESQQREVLQKVLLLIDRYDLYGKVAYPKHHRPDDVPELYRLAA 338 (439)
T ss_pred ccCCHHHHHHHHHhChhhhhhccEEEEeCCccccccccHHHHHHHHHHHHHHHHcCCCceEEecCCCCHHHHHHHHHHHh
Confidence 99999999999987643334456666778888777776655667778889999999999999999999999999999874
Q ss_pred cCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001541 566 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1057)
...|+||+||..|+||++++||||||+|||+|+.||+.|++.++.+|++|+|.|+++++++|.+++++++++++++++++
T Consensus 339 ~~~Dv~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~~~~~a~ 418 (439)
T TIGR02472 339 RSRGIFVNPALTEPFGLTLLEAAACGLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSDSSQWQLWSRNGI 418 (439)
T ss_pred hcCCEEecccccCCcccHHHHHHHhCCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 44489999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHHHHHH
Q 001541 646 KNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 646 ~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+++ ++|||+.++++|+++++
T Consensus 419 ~~~~~~fsw~~~~~~~~~l~~ 439 (439)
T TIGR02472 419 EGVRRHYSWDAHVEKYLRILQ 439 (439)
T ss_pred HHHHHhCCHHHHHHHHHHHhC
Confidence 998 79999999999998863
|
This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase. |
| >PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-49 Score=496.67 Aligned_cols=610 Identities=13% Similarity=0.140 Sum_probs=406.1
Q ss_pred CeEEEEccCCCc--c---cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHH
Q 001541 253 GAYIIRIPFGPK--D---KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSA 321 (1057)
Q Consensus 253 gv~i~rip~~p~--~---~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a 321 (1057)
++.++.++..+. + ....+..+||.+.. |-...+....++-+.+.+.+...- ..-|+|..|......++
T Consensus 70 ~~~~~~v~l~~~~~~~~y~gf~n~~lWp~~H~~~~~~~~~~~~w~~Y~~vN~~fA~~~~~~~-~~~d~vwvhDYhl~l~p 148 (726)
T PRK14501 70 ELGLVPVFLSAEEVDRYYEGFCNSTLWPLFHYFPEYTEFEDRFWESYERVNQRFAEAIAAIA-RPGDVVWVHDYQLMLLP 148 (726)
T ss_pred CceEEEEeCCHHHHHHHHHHhhhccccchhcccCcccCcCHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeCchhhhHH
Confidence 455666655331 1 12456778886532 222333334444444444333321 12489999998777777
Q ss_pred HHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 322 ALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 322 ~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
..+.++ ...++-|..|-.++...- +. ...+...+ -..+-.+|.|-..|......+....
T Consensus 149 ~~lr~~~~~~~igfFlH~pfP~~~~--f~-----------~lp~~~~l---l~~ll~~Dligf~t~~~~r~Fl~~~---- 208 (726)
T PRK14501 149 AMLRERLPDARIGFFLHIPFPSFEV--FR-----------LLPWREEI---LEGLLGADLIGFHTYDYVRHFLSSV---- 208 (726)
T ss_pred HHHHhhCCCCcEEEEeeCCCCChHH--Hh-----------hCCChHHH---HHHHhcCCeEEeCCHHHHHHHHHHH----
Confidence 777654 357899999988774321 00 01111111 2367889999999988777655432
Q ss_pred hHHHHHHHHh-HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEE
Q 001541 401 PVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVIL 479 (1057)
Q Consensus 401 ~~~~~~l~~~-~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 479 (1057)
.+.|... ...++...|+.. ++.++|+|||++.|.+..... ........++.. .+++++|+
T Consensus 209 ---~~~l~~~~~~~~~~~~gr~~-~v~v~p~GID~~~f~~~~~~~-------------~~~~~~~~lr~~--~~~~~~il 269 (726)
T PRK14501 209 ---LRVLGYETELGEIRLGGRIV-RVDAFPMGIDYDKFHNSAQDP-------------EVQEEIRRLRQD--LRGRKIIL 269 (726)
T ss_pred ---HHHcCCccCCCeEEECCEEE-EEEEEECeEcHHHHHHHhcCc-------------hHHHHHHHHHHH--cCCCEEEE
Confidence 1111111 113455556544 799999999999997542110 001111122222 35778999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC-----CCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 480 ALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR-----DGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 480 ~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG~~-----~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
++||+++.||+..+++||+.+.+..+.. +++| ++|.+ ++++++.....+..++|+....+.++.+.++|.++
T Consensus 270 ~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~ 349 (726)
T PRK14501 270 SIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRS 349 (726)
T ss_pred EecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCC
Confidence 9999999999999999999987654432 3444 44421 33344444444455555555555567677889999
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 626 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~-----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~a 626 (1057)
+++++++++|+.| ||||+||++||||++++||||| |+||+++..|+..+++ .|++|+|+|++++|++
T Consensus 350 ~~~~~l~~ly~~a----Dv~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~----~~llv~P~d~~~la~a 421 (726)
T PRK14501 350 LPFEELVALYRAA----DVALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA----EALLVNPNDIEGIAAA 421 (726)
T ss_pred CCHHHHHHHHHhc----cEEEecccccccCcccceEEEEcCCCCceEEEecccchhHHhC----cCeEECCCCHHHHHHH
Confidence 9999999999999 9999999999999999999999 6688888899998884 4999999999999999
Q ss_pred HHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCCCccchhhhhcccccc
Q 001541 627 LLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKF 705 (1057)
Q Consensus 627 I~~ll~d~-~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~l~~ 705 (1057)
|.++|+++ +++.+..+++++.+.+|||..|+++|++.|.++...+....... +.
T Consensus 422 i~~~l~~~~~e~~~r~~~~~~~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~--------------------~~----- 476 (726)
T PRK14501 422 IKRALEMPEEEQRERMQAMQERLRRYDVHKWASDFLDELREAAEKNKAFASKP--------------------IT----- 476 (726)
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhhhcccccc--------------------CC-----
Confidence 99999964 45555566788888999999999999999998765432111100 00
Q ss_pred ccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCcccCcceEEEEEecCCC
Q 001541 706 SLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFVISVDCDS 785 (1057)
Q Consensus 706 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kkLi~~DiDGTL 785 (1057)
....+.++.+|+ .+.+|+|++|+||||
T Consensus 477 -------------------------~~~~~~~~~~y~----------------------------~~~~rLi~~D~DGTL 503 (726)
T PRK14501 477 -------------------------PAAAEEIIARYR----------------------------AASRRLLLLDYDGTL 503 (726)
T ss_pred -------------------------ccCHHHHHHHHH----------------------------hccceEEEEecCccc
Confidence 112456777777 466799999999999
Q ss_pred C--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCCCCCC
Q 001541 786 T--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDG 857 (1057)
Q Consensus 786 ~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~~~~~ 857 (1057)
+ ..+++.++++|++|.++ +|+.|+|+|||++..+.+++..+++ ++||+||++|+.++.
T Consensus 504 ~~~~~~~~~~~~~~~~~~~L~~L~~d---~g~~V~ivSGR~~~~l~~~~~~~~l------~liaenG~~i~~~~~----- 569 (726)
T PRK14501 504 VPFAPDPELAVPDKELRDLLRRLAAD---PNTDVAIISGRDRDTLERWFGDLPI------HLVAEHGAWSRAPGG----- 569 (726)
T ss_pred cCCCCCcccCCCCHHHHHHHHHHHcC---CCCeEEEEeCCCHHHHHHHhCCCCe------EEEEeCCEEEeCCCC-----
Confidence 5 24789999999999985 5899999999999999999977655 699999999986542
Q ss_pred Cccccccchhh--cccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCc---cHHHHHHH
Q 001541 858 PFVVDFYYHSH--IEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTP---PVKELRKV 932 (1057)
Q Consensus 858 ~~~~d~~~~~~--i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~---~~~el~~~ 932 (1057)
.|... ....| .+.+..++..+..... ....+ ....+++|++.+.+... ..+++.+.
T Consensus 570 ------~w~~~~~~~~~w-~~~v~~il~~~~~~~~--------gs~ie----~k~~~l~~~~r~~d~~~~~~~a~~l~~~ 630 (726)
T PRK14501 570 ------EWQLLEPVATEW-KDAVRPILEEFVDRTP--------GSFIE----EKEASLAWHYRNADPELGEARANELILA 630 (726)
T ss_pred ------ceEECCCcchhH-HHHHHHHHHHHHhcCC--------CcEEE----EcceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 12111 12334 2344444433322111 01111 11355777765433111 12345555
Q ss_pred HHHh--cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc---ceEEEeCCCc
Q 001541 933 LRIQ--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV---HKTVILKGIC 1007 (1057)
Q Consensus 933 l~~~--~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a---g~gVAMgNa~ 1007 (1057)
+... ...+.++ +.+ +++||+|+++|||.|+++|++ +++++.+++ +||+.| | ++||+.+ +.+|+|||+.
T Consensus 631 l~~~~~~~~~~v~-~g~-~~veV~p~~vnKG~al~~ll~--~~~~d~vl~-~GD~~n-D-e~Mf~~~~~~~~~v~vG~~~ 703 (726)
T PRK14501 631 LSSLLSNAPLEVL-RGN-KVVEVRPAGVNKGRAVRRLLE--AGPYDFVLA-IGDDTT-D-EDMFRALPETAITVKVGPGE 703 (726)
T ss_pred HHHHhcCCCeEEE-ECC-eEEEEEECCCCHHHHHHHHHh--cCCCCEEEE-ECCCCC-h-HHHHHhcccCceEEEECCCC
Confidence 5442 2234433 344 589999999999999999999 777788877 888888 8 9999986 7999999865
Q ss_pred hhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 1008 SSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 1008 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
..+.|...++ +++...|+.+-
T Consensus 704 -----------------------s~A~~~l~~~--~eV~~~L~~l~ 724 (726)
T PRK14501 704 -----------------------SRARYRLPSQ--REVRELLRRLL 724 (726)
T ss_pred -----------------------CcceEeCCCH--HHHHHHHHHHh
Confidence 2334454443 66888887753
|
|
| >PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-45 Score=457.02 Aligned_cols=529 Identities=13% Similarity=0.103 Sum_probs=373.7
Q ss_pred ceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 307 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 307 pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
-|+|-.|......+...+.+. .+.++.|..|..++..-- +. .....+. -...+-.||.|-+.|
T Consensus 148 ~d~vWvhDYhL~llp~~lR~~~~~~~igfFlHiPFPs~e~--fr-----------~lp~r~~---il~gll~aDligF~t 211 (797)
T PLN03063 148 GDVVWCHDYHLMFLPQYLKEYNNKMKVGWFLHTPFPSSEI--YK-----------TLPSRSE---LLRAVLTADLIGFHT 211 (797)
T ss_pred CCEEEEecchhhhHHHHHHHhCCCCcEEEEecCCCCCHHH--Hh-----------hCCCHHH---HHHHHhcCCEEEeCC
Confidence 379999988777777777654 468999999988774421 00 0000111 123678999999999
Q ss_pred HHHHHHHHhhhCCCChHHHHHHHHh-HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 386 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 386 ~~~~~~~~~~y~~~~~~~~~~l~~~-~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
......+..... +.|... ...++...|+.. ++.+||+|||++.|.+..... .......
T Consensus 212 ~~y~r~Fl~~~~-------r~l~~~~~~~~i~~~gr~~-~I~viP~GID~~~f~~~~~~~-------------~~~~~~~ 270 (797)
T PLN03063 212 YDFARHFLSACT-------RILGVEGTHEGVVDQGKVT-RVAVFPIGIDPERFINTCELP-------------EVKQHMK 270 (797)
T ss_pred HHHHHHHHHHHH-------HHhCccccCCceEECCeEE-EEEEEecccCHHHHHHHhcCh-------------hHHHHHH
Confidence 988877665321 111111 123455555555 899999999999887532110 0111122
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEEE-e-----cCCCCcccchhhHHHHHHHHHH
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLIM-G-----NRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~LIv-G-----~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
.++..+ .++++|+++||+++.||+..+|+||+.+.+.++.. +++|+. + +++++++++....++.++++..
T Consensus 271 ~lr~~~--~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvLvqia~psr~~~~~y~~l~~~v~~l~g~In~~ 348 (797)
T PLN03063 271 ELKRFF--AGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVMLVQIAVPTRNDVPEYQKLKSQVHELVGRINGR 348 (797)
T ss_pred HHHHhc--CCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEEEEEecCCCCchHHHHHHHHHHHHHHHHhhcc
Confidence 233322 46889999999999999999999999998666654 355443 2 2334444444444444445554
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhhcCCce
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNG 612 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~P----VVat~~Gg~~eiv~~~~~G 612 (1057)
....++.+.+++.++++.+++.++|+.| ||||+||++|||||+++||||||+| +|+|..+|..+.+ +.+|
T Consensus 349 ~g~~~~~pv~~l~~~v~~~el~aly~~A----DvfvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~G~~~~l--~~~a 422 (797)
T PLN03063 349 FGSVSSVPIHHLDCSVDFNYLCALYAIT----DVMLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFAGAGQSL--GAGA 422 (797)
T ss_pred cccCCCceeEEecCCCCHHHHHHHHHhC----CEEEeCccccccCcchhhHheeecCCCCCEEeeCCcCchhhh--cCCe
Confidence 4555666777778899999999999999 9999999999999999999999999 9999988888875 4579
Q ss_pred EEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCCC
Q 001541 613 LLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGD 691 (1057)
Q Consensus 613 llv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 691 (1057)
++|||+|++++|++|.++|+ +++++++..+..++++.+++|..|++.|++.|.++...+.......
T Consensus 423 llVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~~------------- 489 (797)
T PLN03063 423 LLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTHSAQKWADDFMSELNDIIVEAELRTRNI------------- 489 (797)
T ss_pred EEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhCCHHHHHHHHHHHHHHHhhhhhhcccCC-------------
Confidence 99999999999999999999 6778888888889999999999999999999987765432111100
Q ss_pred ccchhhhhccccccccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCccc
Q 001541 692 SLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALR 771 (1057)
Q Consensus 692 ~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 771 (1057)
+. ......++.+|+ .
T Consensus 490 -------~~------------------------------~l~~~~~~~~y~----------------------------~ 504 (797)
T PLN03063 490 -------PL------------------------------ELPEQDVIQQYS----------------------------K 504 (797)
T ss_pred -------CC------------------------------CCCHHHHHHHHH----------------------------h
Confidence 00 112345777887 5
Q ss_pred CcceEEEEEecCCCC-----------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEE
Q 001541 772 RRKHIFVISVDCDST-----------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~-----------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI 840 (1057)
+++++||+|+||||. ..+++.+.++|++|.+. ++..|+|.|||+...+..++...++ +++
T Consensus 505 a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d---~~~~V~IvSGR~~~~L~~~~~~~~l------~l~ 575 (797)
T PLN03063 505 SNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSD---PKTTVVVLSRSGKDILDKNFGEYNI------WLA 575 (797)
T ss_pred ccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcC---CCCEEEEEeCCCHHHHHHHhCCCCC------cEE
Confidence 667999999999994 12678999999999987 7888999999999999999987666 589
Q ss_pred eCCCcEEEeccCCCCCCCccccccch----hhcccccch---hhHHHHHHHhhhcccccccccccccccccccccCcceE
Q 001541 841 CNSGSDLYYSTLNSEDGPFVVDFYYH----SHIEYRWGG---EGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCY 913 (1057)
Q Consensus 841 ~~nGa~I~~~~~~~~~~~~~~d~~~~----~~i~~~w~~---e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 913 (1057)
++||+++...++ .|. ......|.. ..++.+..+.+++..+.| .+.+
T Consensus 576 aeHG~~~r~~~~-----------~w~~~~~~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K----------------~~sl 628 (797)
T PLN03063 576 AENGMFLRHTSG-----------EWVTTMPEHMNLDWVDGVKNVFKYFTDRTPRSYVEKS----------------ETSL 628 (797)
T ss_pred EeCCEEEecCCC-----------ceeeccccccChhHHHHHHHHHHHHHHhCCCcEEEEc----------------CeEE
Confidence 999999875431 121 111223432 346677778888888777 5678
Q ss_pred EEEecCCCCC---ccHHHHHHHHHHh---cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHh------CCCcccEEEE
Q 001541 914 AFSVQKPGMT---PPVKELRKVLRIQ---ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW------GVELSKMVVF 981 (1057)
Q Consensus 914 ~~~~~~~~~~---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~l------gI~~e~viaf 981 (1057)
+||+++.+.. ....++...+... ...+.++ .+...+||.|.++|||.|++.|++++ +-+.+ ++.+
T Consensus 629 a~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~--~Gk~vvEvrp~gvnKG~Av~~ll~~~~~~~~~~~~~d-fvl~ 705 (797)
T PLN03063 629 VWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVV--RGQKSVEVHAIGVTKGAAIGRILGEIVHNKSMTTPID-FVFC 705 (797)
T ss_pred EEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEE--ECCeEEEEEcCCCChHHHHHHHHHHhhhccccCCCCC-EEEE
Confidence 8998755321 3344555554221 1234443 34459999999999999999999987 22333 4444
Q ss_pred ecCC-CCCCccccccCcce
Q 001541 982 VGES-GDTDYEGLLGGVHK 999 (1057)
Q Consensus 982 ~GD~-~n~D~~eML~~ag~ 999 (1057)
+||. .+ | ++||+..+-
T Consensus 706 ~Gdd~~~-D-EdmF~~l~~ 722 (797)
T PLN03063 706 SGYFLEK-D-EDVYTFFEP 722 (797)
T ss_pred eCCCCCC-c-HHHHHhccc
Confidence 7775 66 8 999998763
|
|
| >PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-43 Score=438.15 Aligned_cols=581 Identities=14% Similarity=0.141 Sum_probs=397.5
Q ss_pred cccccCCCChhH-----------HHHHHHHHHHHHHHHHHhhhcCCCCCcc--eEEEEcCCCchHHHHHHHhc-CCCCEE
Q 001541 268 IAKELLWPHIPE-----------FVDGALNHIIRMSNVLGEQIGGGKPVWP--VAIHGHYADAGDSAALLSGA-LNVPML 333 (1057)
Q Consensus 268 l~k~~l~~~l~~-----------f~~~~l~~~~~~~k~L~~~~~~~~~~~p--DvIh~h~~~~~~~a~~l~~~-~~iP~V 333 (1057)
..+..+||.+.. |-...+....+.-+.+.+.+... .+| |+|-.|......+..++.++ ...++-
T Consensus 152 f~n~~LWPlfH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~--~~~~~d~VWVhDYhL~llP~~LR~~~~~~~Ig 229 (854)
T PLN02205 152 FCKQQLWPLFHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEV--INPEDDFVWIHDYHLMVLPTFLRKRFNRVKLG 229 (854)
T ss_pred hhhccccchhccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHH--hCCCCCEEEEeCchhhHHHHHHHhhCCCCcEE
Confidence 456778876532 22333333444444444433322 224 79999988777777777654 457899
Q ss_pred EEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhH--
Q 001541 334 FTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARI-- 411 (1057)
Q Consensus 334 ~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~-- 411 (1057)
|..|..++..-- + ....+... -...+-.||.|=..|...+..+... +.+.|....
T Consensus 230 fFlHiPFPs~ei--f-----------r~LP~r~e---iL~glL~aDlIGFht~~yar~Fl~~-------~~r~lgl~~~~ 286 (854)
T PLN02205 230 FFLHSPFPSSEI--Y-----------KTLPIREE---LLRALLNSDLIGFHTFDYARHFLSC-------CSRMLGLSYES 286 (854)
T ss_pred EEecCCCCChHH--H-----------hhCCcHHH---HHHHHhcCCeEEecCHHHHHHHHHH-------HHHHhCCcccC
Confidence 999988764311 0 01111111 1236789999999999888776553 223332221
Q ss_pred ---hccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCC
Q 001541 412 ---KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKK 488 (1057)
Q Consensus 412 ---~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~K 488 (1057)
..|+...|+.. ++.++|.|||+..|....... .......+++..+..+++++|+.++|+|+.|
T Consensus 287 ~~g~~~~~~~Gr~v-~v~~~PigId~~~~~~~~~~~-------------~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~K 352 (854)
T PLN02205 287 KRGYIGLEYYGRTV-SIKILPVGIHMGQLQSVLSLP-------------ETEAKVKELIKQFCDQDRIMLLGVDDMDIFK 352 (854)
T ss_pred CCcceeEEECCcEE-EEEEEeCeEcHHHHHHHhcCh-------------hHHHHHHHHHHHhccCCCEEEEEccCccccc
Confidence 13555667666 899999999999886322110 1223344555554445789999999999999
Q ss_pred CHHHHHHHHHhcccccCCC--cEEEE--E----ecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHH
Q 001541 489 NITTLVKAFGECRPLRELA--NLTLI--M----GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 560 (1057)
Q Consensus 489 gi~~Ll~A~~~l~~~~~~~--~l~LI--v----G~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~l 560 (1057)
||...+.||+++++.+|.. +++|| + +.++++++++.+..+..++|+....+.++.+.+++...++++++.++
T Consensus 353 Gi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~al 432 (854)
T PLN02205 353 GISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHSTVKRINETFGKPGYDPIVLIDAPLKFYERVAY 432 (854)
T ss_pred CHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHhhcCCCCCceEEEEecCCCHHHHHHH
Confidence 9999999999998777765 45543 2 45567888989999999999999999999998888899999999999
Q ss_pred HHHhhcCCcEEEEcCCCCCCCHHHHHHHHc--------------------CCcEEEcCCCCchhhhhcCCceEEeCCCCH
Q 001541 561 YRLAAKTKGVFINPAFIEPFGLTLIEAAAH--------------------GLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1057)
Q Consensus 561 y~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~--------------------G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1057)
|+.| ||++++|+++||+|+++||+|| |+.||+..+|+..++ ..+++|||+|.
T Consensus 433 y~~A----Dv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gvLiLSEfaGaa~~L----~~Ai~VNP~d~ 504 (854)
T PLN02205 433 YVVA----ECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSMLVVSEFIGCSPSL----SGAIRVNPWNI 504 (854)
T ss_pred HHhc----cEEEeccccccccccchheeEEccCccccccccccccccCCCCceEeeeccchhHHh----CcCeEECCCCH
Confidence 9999 9999999999999999999997 567788888888877 35899999999
Q ss_pred HHHHHHHHHHHhCHH-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCCCccchhhhh
Q 001541 621 QSVADALLKLVADKQ-LWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDI 699 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~-~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~ 699 (1057)
+++|+||.++|+++. +++...+..++++..++...|++.|+.-++.....+........+ +
T Consensus 505 ~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g------------------~ 566 (854)
T PLN02205 505 DAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIG------------------F 566 (854)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhcccc------------------c
Confidence 999999999999655 444445555666689999999999999998764332111110000 0
Q ss_pred cccccc-ccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCcccCcceEEE
Q 001541 700 SLNLKF-SLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPALRRRKHIFV 778 (1057)
Q Consensus 700 ~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kkLi~ 778 (1057)
.++.+. .+|..+ +.-..+.++.+|+ +..+++|+
T Consensus 567 g~~~~~~~~~~~~------------------~~l~~~~i~~~y~----------------------------~~~~rlI~ 600 (854)
T PLN02205 567 GLSFRVVALDPNF------------------RKLSMEHIVSAYK----------------------------RTTTRAIL 600 (854)
T ss_pred ccccccccccccc------------------cccCHHHHHHHHH----------------------------hhcCeEEE
Confidence 000000 011110 1234567888888 56789999
Q ss_pred EEecCCCC------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCC-CCCCCCCeEEeCCCcEEEecc
Q 001541 779 ISVDCDST------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH-LSPSDFDAFICNSGSDLYYST 851 (1057)
Q Consensus 779 ~DiDGTL~------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lg-l~~~~~D~lI~~nGa~I~~~~ 851 (1057)
+|+||||. ..+++.++++|++|.+. +|+.|+|+|||++..+.+++.... + ++||+||+++..++
T Consensus 601 LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d---~g~~VaIvSGR~~~~L~~~f~~~~~l------~laaEHG~~ir~~~ 671 (854)
T PLN02205 601 LDYDGTLMPQASIDKSPSSKSIDILNTLCRD---KNNMVFIVSARSRKTLADWFSPCEKL------GIAAEHGYFLRLKR 671 (854)
T ss_pred EecCCcccCCccccCCCCHHHHHHHHHHHhc---CCCEEEEEeCCCHHHHHHHhCCCCCe------EEEEeCCEEEEeCC
Confidence 99999994 25778999999998765 689999999999999999997653 3 69999999998764
Q ss_pred CCCCCCCccccccchh---hcccccchh---hHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCc-
Q 001541 852 LNSEDGPFVVDFYYHS---HIEYRWGGE---GLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTP- 924 (1057)
Q Consensus 852 ~~~~~~~~~~d~~~~~---~i~~~w~~e---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~- 924 (1057)
.. .|.. .....|... .++.+..+.+++..+.+ .+.++|++++.+...
T Consensus 672 ~~----------~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K----------------~~slv~HyR~adpd~~ 725 (854)
T PLN02205 672 DV----------EWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDK----------------ETALVWCYEDADPDFG 725 (854)
T ss_pred Cc----------eeeecchhhhHHHHHHHHHHHHHHhcCCCchhheec----------------ceEEEEehhhCChHHh
Confidence 21 1211 111223211 12233344455555444 566778876543111
Q ss_pred --cHHHHHHHHHHhcCc-EEEEEeeCCeeEEEecCCCCHHHHHHHHHH---HhCCCcccEEEEecCCCCCCccccccCcc
Q 001541 925 --PVKELRKVLRIQALR-CHVIYCQNGSRINVIPVLASRSQALRYLYL---RWGVELSKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 925 --~~~el~~~l~~~~~~-~~v~~s~~~~~lEI~p~gasKg~AL~~L~~---~lgI~~e~viaf~GD~~n~D~~eML~~ag 998 (1057)
..+++...+...... ...+.+.. .++||.|+++|||.|++.|++ ++|++++.+++ +||+.| | ++||+.++
T Consensus 726 ~~qa~el~~~l~~~l~~~~~~v~~G~-~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~-~GDD~n-D-edMF~~~~ 801 (854)
T PLN02205 726 SCQAKELLDHLESVLANEPVTVKSGQ-NIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLC-IGDDRS-D-EDMFEVIT 801 (854)
T ss_pred hhhhHHHHHHHHHHHhcCceEEEECC-cEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEE-EcCCcc-H-HHHHHHhh
Confidence 123454444432111 12234444 499999999999999999975 46999988888 777777 7 99999886
|
|
| >PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-43 Score=434.21 Aligned_cols=529 Identities=13% Similarity=0.114 Sum_probs=383.3
Q ss_pred ceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 307 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 307 pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
=|+|-+|......+..++.+. .+.++-|..|..++..-- |+..-+-+.-...+-.||.|=+.|
T Consensus 232 gD~VWVHDYHL~LlP~~LR~~~p~~~IGfFlHiPFPs~Ei----------------fr~LP~r~elL~glL~aDlIGFqT 295 (934)
T PLN03064 232 GDVVWCHDYHLMFLPKCLKEYNSNMKVGWFLHTPFPSSEI----------------HRTLPSRSELLRSVLAADLVGFHT 295 (934)
T ss_pred CCEEEEecchhhHHHHHHHHhCCCCcEEEEecCCCCChHH----------------HhhCCcHHHHHHHHhcCCeEEeCC
Confidence 379999988777777777655 457899999988764311 111100001123677999999999
Q ss_pred HHHHHHHHhhhCCCChHHHHHHHHh-HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 386 RQEIEEQWRLYDGFDPVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 386 ~~~~~~~~~~y~~~~~~~~~~l~~~-~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
...+..+.... .+.|... ...||...|+.. ++.++|.|||++.|....... .......
T Consensus 296 ~~y~rhFl~~c-------~rlLg~~~~~~~v~~~Gr~v-~V~~~PiGID~~~f~~~~~~~-------------~v~~~~~ 354 (934)
T PLN03064 296 YDYARHFVSAC-------TRILGLEGTPEGVEDQGRLT-RVAAFPIGIDSDRFIRALETP-------------QVQQHIK 354 (934)
T ss_pred HHHHHHHHHHH-------HHHhCccccCCeEEECCEEE-EEEEEeCEEcHHHHHHHhcCh-------------hHHHHHH
Confidence 98877766532 2222111 124566667665 789999999999997432110 1122233
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc--EEEEE------ecCCCCcccchhhHHHHHHHHHH
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN--LTLIM------GNRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~--l~LIv------G~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
+++..+ .++++|++++|+|+.|||...++||+++++.+|... ++||. ++++++++++.+..+..++|+..
T Consensus 355 ~lr~~~--~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQIa~psr~~v~eY~~l~~~V~~~V~rIN~~ 432 (934)
T PLN03064 355 ELKERF--AGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQIAVPTRTDVPEYQKLTSQVHEIVGRINGR 432 (934)
T ss_pred HHHHHh--CCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEEEcCCCCCCcHHHHHHHHHHHHHHHHHhhh
Confidence 444443 367899999999999999999999999987666642 44431 45567778888888899999999
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhhcCCc
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDN 611 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~-----G~PVVat~~Gg~~eiv~~~~~ 611 (1057)
+.+.++.+.+++...++++++.++|+.| ||||+||++|||||+++||||| |++||+...|...++ +..
T Consensus 433 fg~~~w~Pv~~~~~~l~~eeL~AlY~~A----DV~lvTslrDGmNLva~Eyva~~~~~~GvLILSEfaGaa~~L---~~~ 505 (934)
T PLN03064 433 FGTLTAVPIHHLDRSLDFHALCALYAVT----DVALVTSLRDGMNLVSYEFVACQDSKKGVLILSEFAGAAQSL---GAG 505 (934)
T ss_pred ccCCCcceEEEeccCCCHHHHHHHHHhC----CEEEeCccccccCchHHHHHHhhcCCCCCeEEeCCCchHHHh---CCc
Confidence 9999999988888999999999999999 9999999999999999999999 777785555555544 346
Q ss_pred eEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCCCCCCCCCCCCCCCCCCCCC
Q 001541 612 GLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPG 690 (1057)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 690 (1057)
+++|||+|++++|++|.++|+ ++++++++.+..++++..|||..|++.|++.+..+...+.......
T Consensus 506 AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~~~------------ 573 (934)
T PLN03064 506 AILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTAQEWAETFVSELNDTVVEAQLRTRQV------------ 573 (934)
T ss_pred eEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCHHHHHHHHHHHHHHHHhhhhcccccc------------
Confidence 999999999999999999999 6788888888999999999999999999999987643321111000
Q ss_pred CccchhhhhccccccccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCCcCCcc
Q 001541 691 DSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 770 (1057)
Q Consensus 691 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 770 (1057)
. +....+.++.+|+
T Consensus 574 ---------~-----------------------------~~l~~~~~~~~y~---------------------------- 587 (934)
T PLN03064 574 ---------P-----------------------------PQLPPEDAIQRYL---------------------------- 587 (934)
T ss_pred ---------C-----------------------------CCCCHHHHHHHHH----------------------------
Confidence 0 0122456777887
Q ss_pred cCcceEEEEEecCCCC-----C------------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCC
Q 001541 771 RRRKHIFVISVDCDST-----T------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP 833 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~-----~------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~ 833 (1057)
.+.+++||+|+||||. . .+++.++++|+.|.+. ++..|+|.|||+...+..++..+++
T Consensus 588 ~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~d---p~n~VaIVSGR~~~~Le~~fg~~~L-- 662 (934)
T PLN03064 588 QSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSD---PKTTIVVLSGSDRSVLDENFGEFDM-- 662 (934)
T ss_pred hccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhC---CCCeEEEEeCCCHHHHHHHhCCCCc--
Confidence 5677999999999993 1 1567889999999987 7888999999999999999988776
Q ss_pred CCCCeEEeCCCcEEEeccCCCCCCCccccccch----hhcccccch---hhHHHHHHHhhhccccccccccccccccccc
Q 001541 834 SDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYH----SHIEYRWGG---EGLRKTLVRWASQVTDKKAESGEKVLTPAEQ 906 (1057)
Q Consensus 834 ~~~D~lI~~nGa~I~~~~~~~~~~~~~~d~~~~----~~i~~~w~~---e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 906 (1057)
+++++||+++..++. .|. ......|.. ..++.+..+++++..+.|
T Consensus 663 ----~LaAEHG~~~R~~~~-----------~w~~~~~~~~~~~W~~~v~~ile~~~eRtPGS~IE~K------------- 714 (934)
T PLN03064 663 ----WLAAENGMFLRHTKG-----------EWMTTMPEHLNMDWVDSVKHVFEYFTERTPRSHFETR------------- 714 (934)
T ss_pred ----eEEeeCCeEEecCCC-----------cceeccccccchHHHHHHHHHHHHHHhcCCCcEEEEc-------------
Confidence 599999999876531 121 111223432 345677778888888777
Q ss_pred ccCcceEEEEecCCCCC---ccHHHHHHHHHH-h--cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhC----C-Cc
Q 001541 907 LSTNYCYAFSVQKPGMT---PPVKELRKVLRI-Q--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWG----V-EL 975 (1057)
Q Consensus 907 ~~~~~k~~~~~~~~~~~---~~~~el~~~l~~-~--~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lg----I-~~ 975 (1057)
.+.++||++..+.. ....++.+.+.. . ...+.++ .+...+||.|.++|||.|++.|+.++. . ..
T Consensus 715 ---~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~--~Gk~VVEVrP~gvnKG~Av~~ll~~~~~~~~~~~~ 789 (934)
T PLN03064 715 ---ETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVV--QGSRSVEVRPVGVTKGAAIDRILGEIVHSKSMTTP 789 (934)
T ss_pred ---CcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEE--eCCeEEEEEcCCCCHHHHHHHHHHhhhhccccCCC
Confidence 56788998755311 124455555532 1 2234443 444599999999999999999999762 1 12
Q ss_pred ccEEEEecCCCCCCccccccCcc
Q 001541 976 SKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 976 e~viaf~GD~~n~D~~eML~~ag 998 (1057)
-++|.++||+-.|| ++||+...
T Consensus 790 ~DFvlc~GDd~~~D-EdmF~~l~ 811 (934)
T PLN03064 790 IDYVLCIGHFLGKD-EDIYTFFE 811 (934)
T ss_pred CCEEEEeCCCCCCc-HHHHHHHh
Confidence 24555588865447 99999874
|
|
| >TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.8e-40 Score=386.66 Aligned_cols=402 Identities=26% Similarity=0.376 Sum_probs=292.9
Q ss_pred EEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccc
Q 001541 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDD 247 (1057)
Q Consensus 168 I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~ 247 (1057)
|++|+.|.. |...+-..+.||+++|+.+||++|+++| |+|+|+|+....... +.
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~GG~e~~v~~la~~L~~~G--~~V~v~~~~~~~~~~------~~-------------- 54 (405)
T TIGR03449 1 VAMISMHTS----PLQQPGTGDAGGMNVYILETATELARRG--IEVDIFTRATRPSQP------PV-------------- 54 (405)
T ss_pred CeEEeccCC----ccccCCCcCCCCceehHHHHHHHHhhCC--CEEEEEecccCCCCC------Cc--------------
Confidence 678887876 3333322346999999999999999999 999999975321110 00
Q ss_pred cCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhc
Q 001541 248 MGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA 327 (1057)
Q Consensus 248 ~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~ 327 (1057)
....+|+.+++++.++.. ...+..+..++..|.... +...++. ...+||+||+|++..+.++..+++.
T Consensus 55 ~~~~~~~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~----------~~~~~~~-~~~~~Diih~h~~~~~~~~~~~~~~ 122 (405)
T TIGR03449 55 VEVAPGVRVRNVVAGPYE-GLDKEDLPTQLCAFTGGV----------LRAEARH-EPGYYDLIHSHYWLSGQVGWLLRDR 122 (405)
T ss_pred cccCCCcEEEEecCCCcc-cCCHHHHHHHHHHHHHHH----------HHHHhhc-cCCCCCeEEechHHHHHHHHHHHHh
Confidence 111358899998765541 111111111111111111 1111111 1146999999998778888888888
Q ss_pred CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHH
Q 001541 328 LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1057)
Q Consensus 328 ~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l 407 (1057)
+++|+|+|.|++...+...+ ..... ... ... ...|...+..+|.|+++|+...+.+...+.
T Consensus 123 ~~~p~v~t~h~~~~~~~~~~------~~~~~-~~~-~~~-~~~e~~~~~~~d~vi~~s~~~~~~~~~~~~---------- 183 (405)
T TIGR03449 123 WGVPLVHTAHTLAAVKNAAL------ADGDT-PEP-EAR-RIGEQQLVDNADRLIANTDEEARDLVRHYD---------- 183 (405)
T ss_pred cCCCEEEeccchHHHHHHhc------cCCCC-Cch-HHH-HHHHHHHHHhcCeEEECCHHHHHHHHHHcC----------
Confidence 99999999998753221100 00000 000 111 113566889999999999987776544332
Q ss_pred HHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCC
Q 001541 408 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPK 487 (1057)
Q Consensus 408 ~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~ 487 (1057)
....++.+||||+|.+.|.+.+. .....++..++++++|+++||+.+.
T Consensus 184 ------------~~~~ki~vi~ngvd~~~~~~~~~--------------------~~~~~~~~~~~~~~~i~~~G~l~~~ 231 (405)
T TIGR03449 184 ------------ADPDRIDVVAPGADLERFRPGDR--------------------ATERARLGLPLDTKVVAFVGRIQPL 231 (405)
T ss_pred ------------CChhhEEEECCCcCHHHcCCCcH--------------------HHHHHhcCCCCCCcEEEEecCCCcc
Confidence 22238999999999988864311 1123334445678999999999999
Q ss_pred CCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001541 488 KNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 566 (1057)
Q Consensus 488 Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~ 566 (1057)
||++.+++|+..+.+..+..++.+ |+|+..... .....++.+++..+++.++|.|+|+++.+++..+|+.|
T Consensus 232 K~~~~li~a~~~l~~~~~~~~~~l~ivG~~~~~g------~~~~~~l~~~~~~~~l~~~v~~~g~~~~~~~~~~l~~a-- 303 (405)
T TIGR03449 232 KAPDVLLRAVAELLDRDPDRNLRVIVVGGPSGSG------LATPDALIELAAELGIADRVRFLPPRPPEELVHVYRAA-- 303 (405)
T ss_pred cCHHHHHHHHHHHHhhCCCcceEEEEEeCCCCCc------chHHHHHHHHHHHcCCCceEEECCCCCHHHHHHHHHhC--
Confidence 999999999999865444434665 677532210 01246788889999999999999999999999999999
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001541 567 TKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLK 646 (1057)
Q Consensus 567 ~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 646 (1057)
|++|+||..|+||++++||||+|+|||+++.||..|++.++.+|++++|+|+++++++|.+++++++.++++++++++
T Consensus 304 --d~~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~ 381 (405)
T TIGR03449 304 --DVVAVPSYNESFGLVAMEAQACGTPVVAARVGGLPVAVADGETGLLVDGHDPADWADALARLLDDPRTRIRMGAAAVE 381 (405)
T ss_pred --CEEEECCCCCCcChHHHHHHHcCCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCHHHHHHHHHHHHHccc
Q 001541 647 NIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 647 ~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
.+++|||+.++++|+++|.++.
T Consensus 382 ~~~~fsw~~~~~~~~~~y~~~~ 403 (405)
T TIGR03449 382 HAAGFSWAATADGLLSSYRDAL 403 (405)
T ss_pred HHHhCCHHHHHHHHHHHHHHHh
Confidence 8888999999999999998764
|
Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species. |
| >PLN02939 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-39 Score=390.79 Aligned_cols=518 Identities=17% Similarity=0.164 Sum_probs=333.3
Q ss_pred hhhhhHHHHH--hhhh-----hhhhhhHHHHHHHHHHHHHhhccchhhhhhhhccCCCcCCCcccccccCCCCCCCCCCC
Q 001541 75 LENMCWRIWN--LARQ-----KKQLEGEAAQRMAKRRLERERGRREATADMSEDLSEGEKGDIVSDVSAHGDSTRSRLPR 147 (1057)
Q Consensus 75 ~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (1057)
-..|-|.+|- |-|= .+-|--+||.-+-+--+.|+..-.++--+...... ..
T Consensus 408 ~~~~~~~~~~~lll~id~~~~~~~~~~~~a~~lr~~~~~~~~~~~~~~~~~~~~~~----------------------~~ 465 (977)
T PLN02939 408 ADDMPSEFWSRILLLIDGWLLEKKISNNDAKLLREMVWKRDGRIREAYLSCKGKNE----------------------RE 465 (977)
T ss_pred hhhCCHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHhhhhhHHHHHHHHhcCch----------------------HH
Confidence 4579999994 2221 22267778887777777777777776665432100 01
Q ss_pred CChhhhhhhhhcccCCcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCC
Q 001541 148 ISSVDAMETWISQQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW 227 (1057)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~ 227 (1057)
..+ .+..+....+.++|+|+||+.... +-..+||..-+|..|.++|++.| |+|.|+++.+..-..+.
T Consensus 466 ~~~--~~~~~~~~~~~~~mkILfVasE~a---------P~aKtGGLaDVv~sLPkAL~~~G--hdV~VIlP~Y~~i~~~~ 532 (977)
T PLN02939 466 AVE--NFLKLTLSGTSSGLHIVHIAAEMA---------PVAKVGGLADVVSGLGKALQKKG--HLVEIVLPKYDCMQYDQ 532 (977)
T ss_pred HHH--HHHHhccCCCCCCCEEEEEEcccc---------cccccccHHHHHHHHHHHHHHcC--CeEEEEeCCCcccChhh
Confidence 111 344455566677899999996554 23679999999999999999999 99999999774221111
Q ss_pred ccCCcc-c-----ccCCCCCCccccccCCCCCeEEEEccC-CCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhc
Q 001541 228 SYGEPT-E-----MLTPRNSDDFMDDMGESSGAYIIRIPF-GPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIG 300 (1057)
Q Consensus 228 ~y~~~~-e-----~l~~~~~~~~~~~~~~~~gv~i~rip~-~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~ 300 (1057)
..+... + .+. +....+.--....+|+.++.+.. .|. .+..+..+..+-+.+. ++.. +.++..+.+.
T Consensus 533 ~~~~~~~~~~~~~~~~-g~~~~~~v~~~~~~GV~vyfId~~~~~-~fF~R~~iYg~~Dn~~----RF~~-FsrAaLe~~~ 605 (977)
T PLN02939 533 IRNLKVLDVVVESYFD-GNLFKNKIWTGTVEGLPVYFIEPQHPS-KFFWRAQYYGEHDDFK----RFSY-FSRAALELLY 605 (977)
T ss_pred hhcccccceEEEEeec-CceeEEEEEEEEECCeeEEEEecCCch-hccCCCCCCCCccHHH----HHHH-HHHHHHHHHH
Confidence 000000 0 000 00000000012235777777753 121 2333444433322221 1111 1111222221
Q ss_pred CCCCCcceEEEEcCCCchHHHHHHHh------cCCCCEEEEecCCchhhH---HHHHHhhhcchHHHH--HHH--HHHHH
Q 001541 301 GGKPVWPVAIHGHYADAGDSAALLSG------ALNVPMLFTGHSLGRDKL---EQLLKQARLSRDEIN--ATY--KIMRR 367 (1057)
Q Consensus 301 ~~~~~~pDvIh~h~~~~~~~a~~l~~------~~~iP~V~t~H~l~~~~~---~~l~~~g~~~~~~~~--~~y--k~~~r 367 (1057)
.. ..+|||||+|.|.++.++.++.. ..++|+|+|+|++...-. ..+...|. ....+. ... .+..+
T Consensus 606 ~~-~~~PDIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~l~~lGL-~~~~l~~~d~le~~~~~~ 683 (977)
T PLN02939 606 QS-GKKPDIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASDLASCGL-DVHQLDRPDRMQDNAHGR 683 (977)
T ss_pred hc-CCCCCEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHHHHHcCC-CHHHccChhhhhhccCCc
Confidence 11 25799999999998887554332 246899999999854221 11111111 111110 000 01122
Q ss_pred HHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCC-CC
Q 001541 368 IEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDM-DG 446 (1057)
Q Consensus 368 i~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~-~~ 446 (1057)
+..-+..+..||.|+|+|+...++....+ +. .+.. .++.+..++.+||||||++.|.|..+.. +.
T Consensus 684 iN~LK~GIv~AD~VtTVSptYA~EI~te~-G~--GL~~-----------~L~~~~~Kl~gIlNGID~e~wnPatD~~L~~ 749 (977)
T PLN02939 684 INVVKGAIVYSNIVTTVSPTYAQEVRSEG-GR--GLQD-----------TLKFHSKKFVGILNGIDTDTWNPSTDRFLKV 749 (977)
T ss_pred hHHHHHHHHhCCeeEeeeHHHHHHHHHHh-cc--chHH-----------HhccccCCceEEecceehhhcCCcccccccc
Confidence 32334467789999999999888876522 11 0111 1344456899999999999998754211 00
Q ss_pred CCCCCCCCCCCCCCchHHHHHhhhCC---CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCccc
Q 001541 447 ETEGNEDNPASPDPPIWSEIMRFFTN---PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEM 522 (1057)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~ 522 (1057)
.........+. ........+++.+ ++.|+|++|||+.+.||++.+++|+..+.. . ++. +|+|+|++.
T Consensus 750 ~Ys~~dl~GK~--~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~--dvqLVIvGdGp~~--- 820 (977)
T PLN02939 750 QYNANDLQGKA--ANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--L--GGQFVLLGSSPVP--- 820 (977)
T ss_pred ccChhhhhhhh--hhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--c--CCEEEEEeCCCcH---
Confidence 00000000000 1112234455554 356999999999999999999999998753 2 334 578988642
Q ss_pred chhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc
Q 001541 523 SSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP 602 (1057)
Q Consensus 523 ~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~ 602 (1057)
.+...+..++.++++.++|.|+|.++......+|+.| |+||+||.+||||++++|||+||+|+|++++||+
T Consensus 821 -----~~e~eL~~La~~l~l~drV~FlG~~de~lah~IYAaA----DIFLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL 891 (977)
T PLN02939 821 -----HIQREFEGIADQFQSNNNIRLILKYDEALSHSIYAAS----DMFIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGL 891 (977)
T ss_pred -----HHHHHHHHHHHHcCCCCeEEEEeccCHHHHHHHHHhC----CEEEECCCccCCcHHHHHHHHCCCCEEEecCCCC
Confidence 2456788899999998999999998766678999999 9999999999999999999999999999999999
Q ss_pred hhhhhc---------CCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 603 VDIHRV---------LDNGLLVDPHDQQSVADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 603 ~eiv~~---------~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
.|+|.+ +.+|++|+|.|+++|+++|.+++. +++.|++++++++. +.|||+.++++|+++|..+..
T Consensus 892 ~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A~qYeeLY~~ll~ 969 (977)
T PLN02939 892 NDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSASQYEELYQRAVA 969 (977)
T ss_pred cceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH--hcCCHHHHHHHHHHHHHHHHH
Confidence 998865 578999999999999999999875 79999999987653 689999999999999998865
Q ss_pred C
Q 001541 670 R 670 (1057)
Q Consensus 670 ~ 670 (1057)
+
T Consensus 970 ~ 970 (977)
T PLN02939 970 R 970 (977)
T ss_pred h
Confidence 4
|
|
| >PRK00654 glgA glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-39 Score=389.16 Aligned_cols=444 Identities=18% Similarity=0.188 Sum_probs=286.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||+|||.+.+ | ...+||...+|..|+++|+++| |+|+|+|+.+.. ......... .+...+.-...
T Consensus 1 m~i~~vs~e~~----P-----~~k~GGl~~~v~~L~~~L~~~G--~~V~v~~p~y~~--~~~~~~~~~-~~~~~~~~~~~ 66 (466)
T PRK00654 1 MKILFVASECA----P-----LIKTGGLGDVVGALPKALAALG--HDVRVLLPGYPA--IREKLRDAQ-VVGRLDLFTVL 66 (466)
T ss_pred CeEEEEEcccc----c-----CcccCcHHHHHHHHHHHHHHCC--CcEEEEecCCcc--hhhhhcCce-EEEEeeeEEEE
Confidence 79999998876 1 1349999999999999999999 999999987532 110000000 00000000000
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
......+|+++++++.. .+..+..+..+.+.....+ ++. +...+.+... ..+|||||+|+|.++.++.+++
T Consensus 67 ~~~~~~~gv~v~~v~~~---~~~~~~~~y~~~d~~~r~~--~f~---~~~~~~~~~~-~~~pDiiH~h~w~~~~~~~~l~ 137 (466)
T PRK00654 67 FGHLEGDGVPVYLIDAP---HLFDRPSGYGYPDNGERFA--FFS---WAAAEFAEGL-DPRPDIVHAHDWHTGLIPALLK 137 (466)
T ss_pred EEeEEcCCceEEEEeCH---HHcCCCCCCCCcChHHHHH--HHH---HHHHHHHHhc-CCCCceEEECCcHHHHHHHHHH
Confidence 00012368899888752 2344444555443322111 010 1111111111 1479999999999999988887
Q ss_pred hcC-----CCCEEEEecCCchhh---HHHHHHhhhcchHHHH-HHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhh
Q 001541 326 GAL-----NVPMLFTGHSLGRDK---LEQLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLY 396 (1057)
Q Consensus 326 ~~~-----~iP~V~t~H~l~~~~---~~~l~~~g~~~~~~~~-~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y 396 (1057)
..+ ++|+|+|.|++.... ...+...|. ...... ..+.+...+...+.++..||.|+++|+...++....+
T Consensus 138 ~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ad~vitvS~~~~~ei~~~~ 216 (466)
T PRK00654 138 EKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGL-PAEAFHLEGLEFYGQISFLKAGLYYADRVTTVSPTYAREITTPE 216 (466)
T ss_pred HhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCC-ChHHcCchhhhcCCcccHHHHHHHhcCcCeeeCHHHHHHhcccc
Confidence 553 799999999985421 111110110 110000 0000111122345679999999999998877764322
Q ss_pred CCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCC-chHHHHHhhhCCC-C
Q 001541 397 DGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP-PIWSEIMRFFTNP-R 474 (1057)
Q Consensus 397 ~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~ 474 (1057)
.++. +... ++....++.+||||||.+.|.|..... ....+....-.... .....+.++..++ +
T Consensus 217 ~~~g--l~~~-----------~~~~~~ki~vI~NGid~~~~~p~~~~~--~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~ 281 (466)
T PRK00654 217 FGYG--LEGL-----------LRARSGKLSGILNGIDYDIWNPETDPL--LAANYSADDLEGKAENKRALQERFGLPDDD 281 (466)
T ss_pred CCcC--hHHH-----------HHhcccCceEecCCCCccccCCccCcc--cccccChhhhhchHHHHHHHHHHhCCCCCC
Confidence 1110 0000 112234899999999999998753210 00000000000000 0112234444443 6
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE-eCCCCC
Q 001541 475 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA-YPKHHK 553 (1057)
Q Consensus 475 ~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~-f~g~v~ 553 (1057)
.++|+++||+.++||++.+++|+.++.+ +..++ +|+|+++. .+...+.+++.+++. ++. +.|+ +
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~--~~~~l-vivG~g~~---------~~~~~l~~l~~~~~~--~v~~~~g~-~ 346 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLE--QGGQL-VLLGTGDP---------ELEEAFRALAARYPG--KVGVQIGY-D 346 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHh--cCCEE-EEEecCcH---------HHHHHHHHHHHHCCC--cEEEEEeC-C
Confidence 7899999999999999999999999864 22233 47787652 245677788888763 455 4555 4
Q ss_pred CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC------CceEEeCCCCHHHHHHHH
Q 001541 554 QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQSVADAL 627 (1057)
Q Consensus 554 ~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~------~~Gllv~p~d~~~la~aI 627 (1057)
.+.++.+|+.| |++|+||.+||||++++|||+||+|+|+++.||+.|++.++ .+|++|+|.|+++++++|
T Consensus 347 ~~~~~~~~~~a----Dv~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i 422 (466)
T PRK00654 347 EALAHRIYAGA----DMFLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRAL 422 (466)
T ss_pred HHHHHHHHhhC----CEEEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHH
Confidence 45577999999 99999999999999999999999999999999999999887 899999999999999999
Q ss_pred HHHHh---CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 628 LKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 628 ~~ll~---d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
.++++ +++.+.++++++++ +.|||+.++++|+++|+++..
T Consensus 423 ~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~lY~~~~~ 465 (466)
T PRK00654 423 RRALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLELYRRLLG 465 (466)
T ss_pred HHHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHHHHhh
Confidence 99887 77778888887753 689999999999999997653
|
|
| >cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.1e-39 Score=372.37 Aligned_cols=395 Identities=39% Similarity=0.618 Sum_probs=301.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||+|++.|+.+-+.+. .|+.||+++++.+|+++|+++| |+|+|+|.....+...
T Consensus 1 ~~~~~~~~~~~~~~~~----~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~~-------------------- 54 (398)
T cd03800 1 RIALISLHGSPLAQPG----GADTGGQNVYVLELARALARLG--HEVDIFTRRIDDALPP-------------------- 54 (398)
T ss_pred CeEEEeccccccccCC----CCCCCceeehHHHHHHHHhccC--ceEEEEEecCCcccCC--------------------
Confidence 5888888876443222 3789999999999999999999 9999998764221110
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
.....+++.+++++..+. .+.++..+++++..|...+...+.. . ..+||+||+|++..+.++..+++
T Consensus 55 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~-----~~~~Div~~~~~~~~~~~~~~~~ 121 (398)
T cd03800 55 IVELAPGVRVVRVPAGPA-EYLPKEELWPYLDEFADDLLRFLRR-------E-----GGRPDLIHAHYWDSGLVALLLAR 121 (398)
T ss_pred ccccccceEEEecccccc-cCCChhhcchhHHHHHHHHHHHHHh-------c-----CCCccEEEEecCccchHHHHHHh
Confidence 012235889999887665 3455555666666655554444332 0 02699999999888888888889
Q ss_pred cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHH
Q 001541 327 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1057)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~ 406 (1057)
..++|+|++.|++.......... ...+....+...|..+++.+|.|+++|+...+.+...+..
T Consensus 122 ~~~~~~i~~~h~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 184 (398)
T cd03800 122 RLGIPLVHTFHSLGAVKRRHLGA---------ADTYEPARRIEAEERLLRAADRVIASTPQEAEELYSLYGA-------- 184 (398)
T ss_pred hcCCceEEEeecccccCCccccc---------ccccchhhhhhHHHHHHhhCCEEEEcCHHHHHHHHHHccc--------
Confidence 99999999999876543211100 0001122233356778999999999999887776554432
Q ss_pred HHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCC
Q 001541 407 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 486 (1057)
Q Consensus 407 l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~ 486 (1057)
...++.+||||+|.+.|.+..... ..+..+...+++++|+++||+.+
T Consensus 185 --------------~~~~~~vi~ng~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~i~~~gr~~~ 231 (398)
T cd03800 185 --------------YPRRIRVVPPGVDLERFTPYGRAE-------------------ARRARLLRDPDKPRILAVGRLDP 231 (398)
T ss_pred --------------cccccEEECCCCCccceecccchh-------------------hHHHhhccCCCCcEEEEEccccc
Confidence 112689999999998886532110 01222334567889999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 487 KKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
.||++.+++|+..+.... +++. +++|++..... ......+..+++.+++.++|.|+|+++.+++..+|+.|
T Consensus 232 ~k~~~~ll~a~~~l~~~~--~~~~l~i~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a- 303 (398)
T cd03800 232 RKGIDTLIRAYAELPELR--ERANLVIVGGPRDDIL-----AMDEEELRELARELGVIDRVDFPGRVSREDLPALYRAA- 303 (398)
T ss_pred ccCHHHHHHHHHHHHHhC--CCeEEEEEECCCCcch-----hhhhHHHHHHHHhcCCCceEEEeccCCHHHHHHHHHhC-
Confidence 999999999999997543 3445 47777654211 11234577888889999999999999999999999999
Q ss_pred cCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001541 566 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1057)
|++|+||..|+||++++||||||+|||+++.||..|++.++.+|++++++|+++++++|.+++++++.+++++++++
T Consensus 304 ---di~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~a~ 380 (398)
T cd03800 304 ---DVFVNPALYEPFGLTALEAMACGLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAALRRLLTDPALRRRLSRAGL 380 (398)
T ss_pred ---CEEEecccccccCcHHHHHHhcCCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHH
Q 001541 646 KNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 646 ~~v-~~fsw~~~a~~~l 661 (1057)
+.+ ++|||+.++++|+
T Consensus 381 ~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 381 RRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHhCCHHHHHHHHh
Confidence 999 7999999999886
|
The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light. |
| >PLN02316 synthase/transferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=395.52 Aligned_cols=425 Identities=15% Similarity=0.119 Sum_probs=283.9
Q ss_pred CCcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcc-cccCCCC
Q 001541 162 KGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPT-EMLTPRN 240 (1057)
Q Consensus 162 ~~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~-e~l~~~~ 240 (1057)
+..+|+|+|||.+.. |+ ..+||..-+|..|+++|+++| |+|+|||+.+............. ..+..+
T Consensus 584 ~~~pM~Il~VSsE~~----P~-----aKvGGLgDVV~sLp~ALa~~G--h~V~VitP~Y~~i~~~~~~~~~~~~~~~~~- 651 (1036)
T PLN02316 584 KEPPMHIVHIAVEMA----PI-----AKVGGLGDVVTSLSRAVQDLN--HNVDIILPKYDCLNLSHVKDLHYQRSYSWG- 651 (1036)
T ss_pred CCCCcEEEEEEcccC----CC-----CCcCcHHHHHHHHHHHHHHcC--CEEEEEecCCcccchhhcccceEEEEeccC-
Confidence 446799999998876 22 468999999999999999999 99999999864311100000000 000000
Q ss_pred CCccccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHH
Q 001541 241 SDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS 320 (1057)
Q Consensus 241 ~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~ 320 (1057)
...+.-.....+|+.++.+.... .+..+..+..+.+.+. ++..+ .++..+.+.. ...+|||||+|+|.++.+
T Consensus 652 ~~~~~v~~~~~~GV~vyfl~~~~--~~F~r~~~Yg~~Dd~~-RF~~F----~~Aale~l~~-~~~~PDIIHaHDW~talv 723 (1036)
T PLN02316 652 GTEIKVWFGKVEGLSVYFLEPQN--GMFWAGCVYGCRNDGE-RFGFF----CHAALEFLLQ-SGFHPDIIHCHDWSSAPV 723 (1036)
T ss_pred CEEEEEEEEEECCcEEEEEeccc--cccCCCCCCCchhHHH-HHHHH----HHHHHHHHHh-cCCCCCEEEECCChHHHH
Confidence 00000011223577777776421 1122222222222111 11111 1111111111 124799999999998888
Q ss_pred HHHHHhc------CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHh
Q 001541 321 AALLSGA------LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1057)
Q Consensus 321 a~~l~~~------~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1057)
+.+++.. .++|+|+|+|++.... ..+ +.++..||.|+|+|+...+++..
T Consensus 724 a~llk~~~~~~~~~~~p~V~TiHnl~~~~-------------------n~l------k~~l~~AD~ViTVS~tya~EI~~ 778 (1036)
T PLN02316 724 AWLFKDHYAHYGLSKARVVFTIHNLEFGA-------------------NHI------GKAMAYADKATTVSPTYSREVSG 778 (1036)
T ss_pred HHHHHHhhhhhccCCCCEEEEeCCcccch-------------------hHH------HHHHHHCCEEEeCCHHHHHHHHh
Confidence 8887653 4589999999874211 001 13578899999999998877654
Q ss_pred hhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCC-CCCCCCCCCCCCCCC-CchHHHHHhhhCC
Q 001541 395 LYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDM-DGETEGNEDNPASPD-PPIWSEIMRFFTN 472 (1057)
Q Consensus 395 ~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 472 (1057)
.+. +. ....++.+||||||++.|.|..+.. +..... ....... ........+++.+
T Consensus 779 ~~~-l~-------------------~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~--~~~~~gK~~~k~~Lr~~lGL~ 836 (1036)
T PLN02316 779 NSA-IA-------------------PHLYKFHGILNGIDPDIWDPYNDNFIPVPYTS--ENVVEGKRAAKEALQQRLGLK 836 (1036)
T ss_pred ccC-cc-------------------cccCCEEEEECCccccccCCcccccccccCCc--hhhhhhhhhhHHHHHHHhCCC
Confidence 221 00 1123899999999999988753211 000000 0000000 0111233445544
Q ss_pred -CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCC--CCCEEeC
Q 001541 473 -PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL--YGQVAYP 549 (1057)
Q Consensus 473 -~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l--~~~V~f~ 549 (1057)
++.|+|+++|||.++||++.|++|+..+.. ....+ +|+|+|++. .+...+..++.++++ .++|.|.
T Consensus 837 ~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~--~~~ql-VIvG~Gpd~--------~~e~~l~~La~~Lg~~~~~rV~f~ 905 (1036)
T PLN02316 837 QADLPLVGIITRLTHQKGIHLIKHAIWRTLE--RNGQV-VLLGSAPDP--------RIQNDFVNLANQLHSSHHDRARLC 905 (1036)
T ss_pred cccCeEEEEEeccccccCHHHHHHHHHHHhh--cCcEE-EEEeCCCCH--------HHHHHHHHHHHHhCccCCCeEEEE
Confidence 367999999999999999999999999863 22333 578988752 345678888888865 4689998
Q ss_pred CCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC-------------CceEEeC
Q 001541 550 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL-------------DNGLLVD 616 (1057)
Q Consensus 550 g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~-------------~~Gllv~ 616 (1057)
+..+......+|+.| |+||+||.+||||++.+|||+||+|+|++++||++|+|.++ .+|++|+
T Consensus 906 g~~de~lah~iyaaA----DiflmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~ 981 (1036)
T PLN02316 906 LTYDEPLSHLIYAGA----DFILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFD 981 (1036)
T ss_pred ecCCHHHHHHHHHhC----cEEEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCceEEeC
Confidence 775333334799999 99999999999999999999999999999999999999874 6899999
Q ss_pred CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 001541 617 PHDQQSVADALLKLVAD-KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~~ 668 (1057)
|.|+++|+.+|.+++.+ ++....++..+++.+ +.|||+..+++|+++|+.+.
T Consensus 982 ~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 982 GADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNRPALDYMELYHSAR 1035 (1036)
T ss_pred CCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHh
Confidence 99999999999999986 455566788888877 68999999999999998764
|
|
| >PRK10307 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=370.38 Aligned_cols=398 Identities=16% Similarity=0.148 Sum_probs=287.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCC--ccCCcccccCCCCCCc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDW--SYGEPTEMLTPRNSDD 243 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~--~y~~~~e~l~~~~~~~ 243 (1057)
|||++|+.+++ |+.||.+.++.+|+++|.++| |+|+|+|+....|.... .+....
T Consensus 1 mkIlii~~~~~-----------P~~~g~~~~~~~l~~~L~~~G--~~V~vit~~~~~~~~~~~~~~~~~~---------- 57 (412)
T PRK10307 1 MKILVYGINYA-----------PELTGIGKYTGEMAEWLAARG--HEVRVITAPPYYPQWRVGEGYSAWR---------- 57 (412)
T ss_pred CeEEEEecCCC-----------CCccchhhhHHHHHHHHHHCC--CeEEEEecCCCCCCCCCCccccccc----------
Confidence 79999997765 789999999999999999999 99999998643232110 111000
Q ss_pred cccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC--chHHH
Q 001541 244 FMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD--AGDSA 321 (1057)
Q Consensus 244 ~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~--~~~~a 321 (1057)
......+|++++|+|....... . .+..... ...+.....+.+...+ . .+||+||+|.+. ....+
T Consensus 58 --~~~~~~~~i~v~r~~~~~~~~~----~---~~~~~~~-~~~~~~~~~~~~~~~~---~-~~~Div~~~~p~~~~~~~~ 123 (412)
T PRK10307 58 --YRRESEGGVTVWRCPLYVPKQP----S---GLKRLLH-LGSFALSSFFPLLAQR---R-WRPDRVIGVVPTLFCAPGA 123 (412)
T ss_pred --ceeeecCCeEEEEccccCCCCc----c---HHHHHHH-HHHHHHHHHHHHhhcc---C-CCCCEEEEeCCcHHHHHHH
Confidence 0111236899999986322100 0 0111110 1111111111211111 1 469999999763 34566
Q ss_pred HHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCCh
Q 001541 322 ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1057)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1057)
.++++..++|+|+++|+.+++... ..|..... ...++... .|+++++.||.|+++|+...+.+...
T Consensus 124 ~~~~~~~~~~~v~~~~d~~~~~~~---~~~~~~~~---~~~~~~~~--~~~~~~~~ad~ii~~S~~~~~~~~~~------ 189 (412)
T PRK10307 124 RLLARLSGARTWLHIQDYEVDAAF---GLGLLKGG---KVARLATA--FERSLLRRFDNVSTISRSMMNKAREK------ 189 (412)
T ss_pred HHHHHhhCCCEEEEeccCCHHHHH---HhCCccCc---HHHHHHHH--HHHHHHhhCCEEEecCHHHHHHHHHc------
Confidence 778888999999999998764421 12222111 11222222 37788999999999999877765332
Q ss_pred HHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEE
Q 001541 402 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILAL 481 (1057)
Q Consensus 402 ~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 481 (1057)
|....++.|||||+|.+.|.+.... .......++...+++++|+|+
T Consensus 190 -----------------~~~~~~i~vi~ngvd~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~i~~~ 235 (412)
T PRK10307 190 -----------------GVAAEKVIFFPNWSEVARFQPVADA-----------------DVDALRAQLGLPDGKKIVLYS 235 (412)
T ss_pred -----------------CCCcccEEEECCCcCHhhcCCCCcc-----------------chHHHHHHcCCCCCCEEEEEc
Confidence 1222389999999999888653210 011123344445667899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHH
Q 001541 482 ARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 560 (1057)
Q Consensus 482 GRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~l 560 (1057)
||+.+.||++.|++|+..+.+ .+++.| |+|+|+. .+.+.+++.++++. +|.|+|+++.++++.+
T Consensus 236 G~l~~~kg~~~li~a~~~l~~---~~~~~l~ivG~g~~-----------~~~l~~~~~~~~l~-~v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 236 GNIGEKQGLELVIDAARRLRD---RPDLIFVICGQGGG-----------KARLEKMAQCRGLP-NVHFLPLQPYDRLPAL 300 (412)
T ss_pred CccccccCHHHHHHHHHHhcc---CCCeEEEEECCChh-----------HHHHHHHHHHcCCC-ceEEeCCCCHHHHHHH
Confidence 999999999999999998742 345664 8898864 46677888889986 7999999999999999
Q ss_pred HHHhhcCCcEEEEcCCCCC----CCHHHHHHHHcCCcEEEcCCCC--chhhhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 561 YRLAAKTKGVFINPAFIEP----FGLTLIEAAAHGLPIVATKNGG--PVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 561 y~~Aa~~~dv~v~ps~~Eg----fgl~~lEAmA~G~PVVat~~Gg--~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
|+.| |++|+|+..|+ +|.+++||||||+|||+|+.|| ..+++. .+|++++|+|+++++++|.++++++
T Consensus 301 ~~~a----Di~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~--~~G~~~~~~d~~~la~~i~~l~~~~ 374 (412)
T PRK10307 301 LKMA----DCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE--GIGVCVEPESVEALVAAIAALARQA 374 (412)
T ss_pred HHhc----CEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh--CCcEEeCCCCHHHHHHHHHHHHhCH
Confidence 9999 99999999888 5778899999999999999876 457876 6899999999999999999999999
Q ss_pred HHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcccC
Q 001541 635 QLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
+++++|++++++.+ ++|||+.++++|+++|.++..
T Consensus 375 ~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~~ 410 (412)
T PRK10307 375 LLRPKLGTVAREYAERTLDKENVLRQFIADIRGLVA 410 (412)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhc
Confidence 99999999999999 589999999999999998764
|
|
| >KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-41 Score=388.92 Aligned_cols=481 Identities=33% Similarity=0.428 Sum_probs=370.7
Q ss_pred hhhhhhhccCCCcCCCcccccccCCCC---CCCCCCCCChhhhhhhhhcccCCcc-eEEEEEecccccccCCcCCCCCCC
Q 001541 114 ATADMSEDLSEGEKGDIVSDVSAHGDS---TRSRLPRISSVDAMETWISQQKGKK-LYIVLISIHGLIRGENMELGRDSD 189 (1057)
Q Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-m~I~~is~h~~~~~~~~~~gr~~d 189 (1057)
+++|+++++++++|.+........... ...++.+...-+.+..|..+.+.-. +.+++. |++ ++| +||
T Consensus 1 ~~~~~~~~~~~~qk~~~~~m~~~~~~~~t~~~~~~~~~~~~~~~~~gg~er~~v~~~~~l~s-------~~~-~lg-~~d 71 (495)
T KOG0853|consen 1 MTNDSSSNISELQKVLWKAMIEKSLLVSTPEKPFEHVTFIHPDLGIGGAERLVVDAAVHLLS-------GQD-VLG-LPD 71 (495)
T ss_pred CcchhhhHHHHhhhhhhhhhhhhhcccccccccchhheeeccccccCchHHHhHHHHHHHHh-------ccc-ccC-CCC
Confidence 468899999999998866655533332 2234445555456777777665422 333322 668 899 999
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 269 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~ 269 (1057)
+||+++|+++.+++|. .++++++...|++...+.....+..|.++. .+-+....+.+++++++|+++..++.
T Consensus 72 ~G~qV~~l~~h~~al~-~~~~~~~~~~~l~~~~~i~vv~~~lP~~~~------~~~~~~~~~~~~~il~~~~~~~~k~~- 143 (495)
T KOG0853|consen 72 TGGQVVYLTSHEDALE-MPLLLRCFAETLDGTPPILVVGDWLPRAMG------QFLEQVAGCAYLRILRIPFGILFKWA- 143 (495)
T ss_pred CCceEEEEehhhhhhc-chHHHHHHHHHhcCCCceEEEEeecCcccc------hhhhhhhccceeEEEEeccchhhhhh-
Confidence 9999999999999998 777777777777654455545555555442 12244556789999999998876665
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHH
Q 001541 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLK 349 (1057)
Q Consensus 270 k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1057)
+.+||++..|+... ..|.+++. . ||++|.++++.+..+.++++++|++.+++.|.++..+.++...
T Consensus 144 -~~~d~~i~d~~~~~--------~~l~~~~~----~-p~~~~~i~~~~h~~~~lla~r~g~~~~l~~~~l~~~e~e~~~~ 209 (495)
T KOG0853|consen 144 -EKVDPIIEDFVSAC--------VPLLKQLS----G-PDVIIKIYFYCHFPDSLLAKRLGVLKVLYRHALDKIEEETTGL 209 (495)
T ss_pred -hhhceeecchHHHH--------HHHHHHhc----C-CcccceeEEeccchHHHhccccCccceeehhhhhhhhhhhhhc
Confidence 77899999888433 22223222 2 9999999999999999999999999999999999988887766
Q ss_pred hhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeC
Q 001541 350 QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 429 (1057)
Q Consensus 350 ~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIp 429 (1057)
+++. +...|++.+++..+...+..+| ++++.++++..|..|+.++..++..++.|.++||.+.+++++++..|+
T Consensus 210 ~~~~----~~ns~~~~~~f~~~~~~L~~~d--~~~~y~ei~~s~~~~~~~~~~~~~~~~~r~~~~v~~~d~~~~siN~~~ 283 (495)
T KOG0853|consen 210 AWKI----LVNSYFTKRQFKATFVSLSNSD--ITSTYPEIDGSWFTYGQYESHLELRLPVRLYRGVSGIDRFFPSINRFE 283 (495)
T ss_pred cceE----ecchhhhhhhhhhhhhhcCCCC--cceeeccccchhccccccccchhcccccceeeeecccceEeeeeeecC
Confidence 5543 6778899999999999999999 888889999999999999888888888888888888888888888888
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc---CC
Q 001541 430 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLR---EL 506 (1057)
Q Consensus 430 nGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~---~~ 506 (1057)
+|.|...+.+ ||..+...- +.
T Consensus 284 pgkd~~l~l~--------------------------------------------------------a~~~~~~~i~~~~~ 307 (495)
T KOG0853|consen 284 PGKDQDLALP--------------------------------------------------------AFTLLHDSIPEPSI 307 (495)
T ss_pred CCCCceeehh--------------------------------------------------------hHHhhhcccCCCCC
Confidence 8777665432 333333222 23
Q ss_pred CcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC-CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHH
Q 001541 507 ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY-GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTL 584 (1057)
Q Consensus 507 ~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~-~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~ 584 (1057)
+..++ ++|+. .+++..+++.+++.++..+++++++. ..|.|+.++++.+. |+.++.++.+|+.|+. |.||+|.
T Consensus 308 ~~~hl~~~g~~-G~d~~~sen~~~~~el~~lie~~~l~g~~v~~~~s~~~~~~---yrl~adt~~v~~qPa~-E~FGiv~ 382 (495)
T KOG0853|consen 308 SSEHLVVAGSR-GYDERDSENVEYLKELLSLIEEYDLLGQFVWFLPSTTRVAK---YRLAADTKGVLYQPAN-EHFGIVP 382 (495)
T ss_pred CceEEEEecCC-CccccchhhHHHHHHHHHHHHHhCccCceEEEecCCchHHH---HHHHHhcceEEecCCC-CCcccee
Confidence 45555 44432 26788889999999999999999996 55777788765555 7777788899999998 9999999
Q ss_pred HHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHH---HHHHHHHHHHhCHHHHHHHHHHHHHHhh-cCCHHHHHHHH
Q 001541 585 IEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ---SVADALLKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTY 660 (1057)
Q Consensus 585 lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~---~la~aI~~ll~d~~~~~~~~~~~~~~v~-~fsw~~~a~~~ 660 (1057)
+||||||+|||||++||+.|+|.++.+|++++| +.+ .+|++|.++..||+.|.+|+++|+++++ .|+|..+.+++
T Consensus 383 IEAMa~glPvvAt~~GGP~EiV~~~~tG~l~dp-~~e~~~~~a~~~~kl~~~p~l~~~~~~~G~~rV~e~fs~~~~~~ri 461 (495)
T KOG0853|consen 383 IEAMACGLPVVATNNGGPAEIVVHGVTGLLIDP-GQEAVAELADALLKLRRDPELWARMGKNGLKRVKEMFSWQHYSERI 461 (495)
T ss_pred HHHHhcCCCEEEecCCCceEEEEcCCcceeeCC-chHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999999999 766 6999999999999999999999999995 69996655555
Q ss_pred HHHHHcccCCCCCCCCCCCCCCCCCCCCCCCccchhhhhcccccccc
Q 001541 661 LSRIAGCKPRHPQWQRNDDGGETSESDSPGDSLRDIQDISLNLKFSL 707 (1057)
Q Consensus 661 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~l~~~~ 707 (1057)
.+.+. +.++|+.. +..++++++.++++++.+++
T Consensus 462 ~~~~~----~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~ 494 (495)
T KOG0853|consen 462 ASVLG----KYLQWEKV----------SSLDSLEDRRYISLFYALSF 494 (495)
T ss_pred HHHhH----hcCCcccc----------cccccccccccHHHHHHhhc
Confidence 55554 55566543 23688899999997766654
|
|
| >PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-38 Score=373.51 Aligned_cols=377 Identities=19% Similarity=0.218 Sum_probs=273.4
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCC
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 242 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~ 242 (1057)
.++|||+++. +.. + .+..||++.++.+|+++|.++| |+|+|+|.....+.
T Consensus 56 ~~~mrI~~~~-~~~----~-----~~~~gG~~~~~~~l~~~L~~~G--~eV~vlt~~~~~~~------------------ 105 (465)
T PLN02871 56 SRPRRIALFV-EPS----P-----FSYVSGYKNRFQNFIRYLREMG--DEVLVVTTDEGVPQ------------------ 105 (465)
T ss_pred CCCceEEEEE-CCc----C-----CcccccHHHHHHHHHHHHHHCC--CeEEEEecCCCCCc------------------
Confidence 6789999997 322 0 2568999999999999999999 99999997532110
Q ss_pred ccccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-chHHH
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSA 321 (1057)
Q Consensus 243 ~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~-~~~~a 321 (1057)
+..++.++++...+.. .... ..+.+ .+...+. +.+.+ .+|||||+|.+. ....+
T Consensus 106 -------~~~g~~v~~~~~~~~~-~~~~-~~~~~--~~~~~l~-------~~i~~-------~kpDiIh~~~~~~~~~~~ 160 (465)
T PLN02871 106 -------EFHGAKVIGSWSFPCP-FYQK-VPLSL--ALSPRII-------SEVAR-------FKPDLIHASSPGIMVFGA 160 (465)
T ss_pred -------cccCceeeccCCcCCc-cCCC-ceeec--cCCHHHH-------HHHHh-------CCCCEEEECCCchhHHHH
Confidence 0125555544322210 0111 00001 0111121 22222 579999999863 34445
Q ss_pred HHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCCh
Q 001541 322 ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1057)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1057)
..+++..++|+|++.|+......... . ....++... ..+++.++.+|.|+++|+...+.+...+.
T Consensus 161 ~~~ak~~~ip~V~~~h~~~~~~~~~~------~---~~~~~~~~~--~~~r~~~~~ad~ii~~S~~~~~~l~~~~~---- 225 (465)
T PLN02871 161 LFYAKLLCVPLVMSYHTHVPVYIPRY------T---FSWLVKPMW--DIIRFLHRAADLTLVTSPALGKELEAAGV---- 225 (465)
T ss_pred HHHHHHhCCCEEEEEecCchhhhhcc------c---chhhHHHHH--HHHHHHHhhCCEEEECCHHHHHHHHHcCC----
Confidence 56677889999999998754332111 0 001111111 12456788999999999987776544321
Q ss_pred HHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhh-CCCCCcEEEE
Q 001541 402 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF-TNPRKPVILA 480 (1057)
Q Consensus 402 ~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Il~ 480 (1057)
.+..++.+||||+|.+.|.|.... .....++. ..+++++|+|
T Consensus 226 ------------------~~~~kv~vi~nGvd~~~f~p~~~~-------------------~~~~~~~~~~~~~~~~i~~ 268 (465)
T PLN02871 226 ------------------TAANRIRVWNKGVDSESFHPRFRS-------------------EEMRARLSGGEPEKPLIVY 268 (465)
T ss_pred ------------------CCcCeEEEeCCccCccccCCcccc-------------------HHHHHHhcCCCCCCeEEEE
Confidence 112389999999999988753211 01111221 2356789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHH
Q 001541 481 LARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPE 559 (1057)
Q Consensus 481 vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ 559 (1057)
+||+.+.||++.+++++..+. ++. +|+|+++. ...+.+++.. .+|.|+|+++.++++.
T Consensus 269 vGrl~~~K~~~~li~a~~~~~------~~~l~ivG~G~~-----------~~~l~~~~~~----~~V~f~G~v~~~ev~~ 327 (465)
T PLN02871 269 VGRLGAEKNLDFLKRVMERLP------GARLAFVGDGPY-----------REELEKMFAG----TPTVFTGMLQGDELSQ 327 (465)
T ss_pred eCCCchhhhHHHHHHHHHhCC------CcEEEEEeCChH-----------HHHHHHHhcc----CCeEEeccCCHHHHHH
Confidence 999999999999999998762 444 48898764 3445555543 3699999999999999
Q ss_pred HHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc---CCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001541 560 IYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV---LDNGLLVDPHDQQSVADALLKLVADKQL 636 (1057)
Q Consensus 560 ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~---~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1057)
+|+.| |+||+||..|+||++++||||||+|||+++.||..|++.+ +.+|++++|+|+++++++|.+++++++.
T Consensus 328 ~~~~a----Dv~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~~~d~~~la~~i~~ll~~~~~ 403 (465)
T PLN02871 328 AYASG----DVFVMPSESETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYTPGDVDDCVEKLETLLADPEL 403 (465)
T ss_pred HHHHC----CEEEECCcccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeCCCCHHHHHHHHHHHHhCHHH
Confidence 99999 9999999999999999999999999999999999999998 8999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHH-HHHcccCCC
Q 001541 637 WARCRQNGLKNIHLFSWPEHCKTYLS-RIAGCKPRH 671 (1057)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~~l~-~~~~~~~~~ 671 (1057)
++++++++++.+++|||+.+++++++ .|.++....
T Consensus 404 ~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 404 RERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999998 688876553
|
|
| >cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=367.11 Aligned_cols=367 Identities=20% Similarity=0.216 Sum_probs=272.4
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... |..||+++++.+|+++|+++| |+|+|+|+....+. + .
T Consensus 1 kI~~v~~~~~-----------p~~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~-----~--~------------- 47 (398)
T cd03796 1 RICMVSDFFY-----------PNLGGVETHIYQLSQCLIKRG--HKVVVITHAYGNRV-----G--I------------- 47 (398)
T ss_pred CeeEEeeccc-----------cccccHHHHHHHHHHHHHHcC--CeeEEEeccCCcCC-----C--c-------------
Confidence 6899986565 789999999999999999999 99999997531110 0 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch--HHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG--DSAALL 324 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~--~~a~~l 324 (1057)
.....++.++++|..+. .+......+.. .+..+.+.+.+ .+|||||+|+.... ..+.++
T Consensus 48 -~~~~~~i~v~~~p~~~~----~~~~~~~~~~~-------~~~~l~~~~~~-------~~~DiIh~~~~~~~~~~~~~~~ 108 (398)
T cd03796 48 -RYLTNGLKVYYLPFVVF----YNQSTLPTFFG-------TFPLLRNILIR-------ERITIVHGHQAFSALAHEALLH 108 (398)
T ss_pred -ccccCceeEEEecceec----cCCccccchhh-------hHHHHHHHHHh-------cCCCEEEECCCCchHHHHHHHH
Confidence 01135788888886332 11111111111 11111122222 57999999986433 345667
Q ss_pred HhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 325 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
++..++|+|+|.|+....... .. ....+ .+++.++.+|.++++|+...+...... .
T Consensus 109 ~~~~~~~~v~t~h~~~~~~~~--------~~-------~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~-~------ 164 (398)
T cd03796 109 ARTMGLKTVFTDHSLFGFADA--------SS-------IHTNK--LLRFSLADVDHVICVSHTSKENTVLRA-S------ 164 (398)
T ss_pred hhhcCCcEEEEecccccccch--------hh-------HHhhH--HHHHhhccCCEEEEecHhHhhHHHHHh-C------
Confidence 788899999999986431100 00 00111 134568899999999988665432111 1
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
.+..++.+||||+|.+.|.+.... ..+++++|+++||+
T Consensus 165 ---------------~~~~k~~vi~ngvd~~~f~~~~~~---------------------------~~~~~~~i~~~grl 202 (398)
T cd03796 165 ---------------LDPERVSVIPNAVDSSDFTPDPSK---------------------------RDNDKITIVVISRL 202 (398)
T ss_pred ---------------CChhhEEEEcCccCHHHcCCCccc---------------------------CCCCceEEEEEecc
Confidence 122389999999999888653211 13567899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
.+.||++.+++|+..+.+. .+++.+ |+|+++. ...+.++++++++.++|.|+|+++.+++..+|+.
T Consensus 203 ~~~Kg~~~li~a~~~l~~~--~~~~~l~i~G~g~~-----------~~~l~~~~~~~~l~~~v~~~G~~~~~~~~~~l~~ 269 (398)
T cd03796 203 VYRKGIDLLVGIIPEICKK--HPNVRFIIGGDGPK-----------RILLEEMREKYNLQDRVELLGAVPHERVRDVLVQ 269 (398)
T ss_pred chhcCHHHHHHHHHHHHhh--CCCEEEEEEeCCch-----------HHHHHHHHHHhCCCCeEEEeCCCCHHHHHHHHHh
Confidence 9999999999999988643 346664 7788764 4567888999999999999999999999999999
Q ss_pred hhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 564 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 564 Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
| |++|+||..|+||++++||||||+|||+|+.||..|++.++ .+++++ .|.++++++|.++++++.+...++++
T Consensus 270 a----d~~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~-~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~ 343 (398)
T cd03796 270 G----HIFLNTSLTEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD-MILLAE-PDVESIVRKLEEAISILRTGKHDPWS 343 (398)
T ss_pred C----CEEEeCChhhccCHHHHHHHHcCCCEEECCCCCchhheeCC-ceeecC-CCHHHHHHHHHHHHhChhhhhhHHHH
Confidence 9 99999999999999999999999999999999999999764 455554 49999999999999988777778888
Q ss_pred HHHHh-hcCCHHHHHHHHHHHHHcccCC
Q 001541 644 GLKNI-HLFSWPEHCKTYLSRIAGCKPR 670 (1057)
Q Consensus 644 ~~~~v-~~fsw~~~a~~~l~~~~~~~~~ 670 (1057)
+++.+ ++|||+..+++|+++|+++...
T Consensus 344 ~~~~~~~~fs~~~~~~~~~~~y~~l~~~ 371 (398)
T cd03796 344 FHNRVKKMYSWEDVAKRTEKVYDRILQT 371 (398)
T ss_pred HHHHHHhhCCHHHHHHHHHHHHHHHhcC
Confidence 88888 6999999999999999988653
|
Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder. |
| >TIGR02095 glgA glycogen/starch synthases, ADP-glucose type | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-38 Score=376.83 Aligned_cols=446 Identities=18% Similarity=0.190 Sum_probs=288.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccC-Ccccc--cC-CCCC
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYG-EPTEM--LT-PRNS 241 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~-~~~e~--l~-~~~~ 241 (1057)
|||++||.... | ...+||...+|..|+++|+++| |+|+|+|+.+..-....... +.... +. .+..
T Consensus 1 m~i~~vs~E~~----P-----~~k~GGl~~~v~~L~~aL~~~G--~~v~v~~p~y~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (473)
T TIGR02095 1 MRVLFVAAEMA----P-----FAKTGGLADVVGALPKALAALG--HDVRVLLPAYGCIEDEVDDQVKVVELVDLSVGPRT 69 (473)
T ss_pred CeEEEEEeccc----c-----ccCcCcHHHHHHHHHHHHHHcC--CeEEEEecCCcChhhhhccCeEEEEEEEEeecCce
Confidence 79999997754 1 1459999999999999999999 99999998764211110000 00000 00 0000
Q ss_pred CccccccCCCCCeEEEEccCCCccccccc-ccCCC--ChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch
Q 001541 242 DDFMDDMGESSGAYIIRIPFGPKDKYIAK-ELLWP--HIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG 318 (1057)
Q Consensus 242 ~~~~~~~~~~~gv~i~rip~~p~~~~l~k-~~l~~--~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~ 318 (1057)
..+.--....+|+.++++.... +..+ ..+.. +...+.. +.. +.+...+.+.. ...+|||||+|.|.++
T Consensus 70 ~~~~~~~~~~~~v~~~~i~~~~---~~~r~~~~y~~~~~d~~~r-~~~----f~~a~~~~~~~-~~~~~DiiH~hdw~~~ 140 (473)
T TIGR02095 70 LYVKVFEGVVEGVPVYFIDNPS---LFDRPGGIYGDDYPDNAER-FAF----FSRAAAELLSG-LGWQPDVVHAHDWHTA 140 (473)
T ss_pred eEEEEEEEEECCceEEEEECHH---HcCCCCCCCCCCCCCHHHH-HHH----HHHHHHHHHHh-cCCCCCEEEECCcHHH
Confidence 0000001233678888886532 1111 11222 2222111 111 11111221111 1257999999999999
Q ss_pred HHHHHHHhcCC---CCEEEEecCCchhh-H-HHHHHhhhcchHHHH-HHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHH
Q 001541 319 DSAALLSGALN---VPMLFTGHSLGRDK-L-EQLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 392 (1057)
Q Consensus 319 ~~a~~l~~~~~---iP~V~t~H~l~~~~-~-~~l~~~g~~~~~~~~-~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~ 392 (1057)
.++.+++...+ +|+|+|+|++.... + ...+....+....+. ..+....++..++.++..||.|+++|+...++.
T Consensus 141 ~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei 220 (473)
T TIGR02095 141 LVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHMEGLEFYGRVNFLKGGIVYADRVTTVSPTYAREI 220 (473)
T ss_pred HHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCchhhhcCCchHHHHHHHHhCCcCeecCHhHHHHh
Confidence 99998887776 99999999985321 1 001110001111000 001111133446678999999999999887776
Q ss_pred HhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCC-CchHHHHHhhhC
Q 001541 393 WRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD-PPIWSEIMRFFT 471 (1057)
Q Consensus 393 ~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 471 (1057)
.....+.. +...|+ ....++.+||||||.+.|.|.....-. ..+........ ......+.++..
T Consensus 221 ~~~~~~~~--l~~~l~-----------~~~~ki~~I~NGid~~~~~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~~~gl 285 (473)
T TIGR02095 221 LTPEFGYG--LDGVLK-----------ARSGKLRGILNGIDTEVWNPATDPYLK--ANYSADDLAGKAENKEALQEELGL 285 (473)
T ss_pred cCCcCCcc--chhHHH-----------hcCCCeEEEeCCCCccccCCCCCcccc--cCcCccchhhhhhhHHHHHHHcCC
Confidence 44211110 011111 122489999999999999875321100 00000000000 011122334444
Q ss_pred CC--CCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe
Q 001541 472 NP--RKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 548 (1057)
Q Consensus 472 ~~--~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f 548 (1057)
+. +.++|+++||+.+.||++.+++|+.++.+. ++. +|+|+++. .+...+.+++.+++ .++.|
T Consensus 286 ~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~----~~~lvi~G~g~~---------~~~~~l~~~~~~~~--~~v~~ 350 (473)
T TIGR02095 286 PVDDDVPLFGVISRLTQQKGVDLLLAALPELLEL----GGQLVVLGTGDP---------ELEEALRELAERYP--GNVRV 350 (473)
T ss_pred CccCCCCEEEEEecCccccChHHHHHHHHHHHHc----CcEEEEECCCCH---------HHHHHHHHHHHHCC--CcEEE
Confidence 43 789999999999999999999999998642 244 47788752 23456777776664 56888
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC------CceEEeCCCCHHH
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL------DNGLLVDPHDQQS 622 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~------~~Gllv~p~d~~~ 622 (1057)
.+.++.+++..+|+.| |++|+||..||||++++|||+||+|+|+++.||+.|++.++ .+|++++|.|+++
T Consensus 351 ~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~ 426 (473)
T TIGR02095 351 IIGYDEALAHLIYAGA----DFILMPSRFEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGA 426 (473)
T ss_pred EEcCCHHHHHHHHHhC----CEEEeCCCcCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHH
Confidence 8877778889999999 99999999999999999999999999999999999999988 8999999999999
Q ss_pred HHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 001541 623 VADALLKLVA----DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 623 la~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++|.+++. +++.++++++++++ +.|||+.++++|+++|+++
T Consensus 427 la~~i~~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~Y~~l 473 (473)
T TIGR02095 427 LLAALSRALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYVELYRSL 473 (473)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHHHHHHhC
Confidence 9999999988 99999999988753 6899999999999999864
|
This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate. |
| >TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=359.37 Aligned_cols=377 Identities=22% Similarity=0.291 Sum_probs=274.3
Q ss_pred eEEEEEecccccccCCcCCCCCCC-CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 244 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d-~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~ 244 (1057)
|||++|+.... |+ .||.++++.+|+++|.+. ++|+|+|.... .
T Consensus 1 mkI~~i~~~~~-----------p~~~GG~~~~v~~l~~~l~~~---~~v~v~~~~~~--~-------------------- 44 (388)
T TIGR02149 1 MKVTVLTREYP-----------PNVYGGAGVHVEELTRELARL---MDVDVRCFGDQ--R-------------------- 44 (388)
T ss_pred CeeEEEecccC-----------ccccccHhHHHHHHHHHHHHh---cCeeEEcCCCc--h--------------------
Confidence 79999985543 55 499999999999999886 56777765321 0
Q ss_pred ccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHH
Q 001541 245 MDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 324 (1057)
Q Consensus 245 ~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l 324 (1057)
....++.+++++.... +. .....+..+.. .... .. ...+|||||+|.+.++..+.++
T Consensus 45 ----~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~---~~~~---------~~--~~~~~divh~~~~~~~~~~~~~ 101 (388)
T TIGR02149 45 ----FDSEGLTVKGYRPWSE---LK--EANKALGTFSV---DLAM---------AN--DPVDADVVHSHTWYTFLAGHLA 101 (388)
T ss_pred ----hcCCCeEEEEecChhh---cc--chhhhhhhhhH---HHHH---------hh--CCCCCCeEeecchhhhhHHHHH
Confidence 0124677777653211 00 00011111100 0000 00 1136999999998777777777
Q ss_pred HhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 325 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
++..++|+|+|.|++.+..... .......+.+..+ .++.+++.+|.|+++|+...+.+...+.+..+
T Consensus 102 ~~~~~~p~v~~~h~~~~~~~~~--------~~~~~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~~~~~~~~~~~--- 168 (388)
T TIGR02149 102 KKLYDKPLVVTAHSLEPLRPWK--------EEQLGGGYKLSSW--AEKTAIEAADRVIAVSGGMREDILKYYPDLDP--- 168 (388)
T ss_pred HHhcCCCEEEEeeccccccccc--------ccccccchhHHHH--HHHHHHhhCCEEEEccHHHHHHHHHHcCCCCc---
Confidence 7778999999999975422100 0000111222333 36678999999999999877766554433222
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
.++.+||||+|...|.+.. ....+.++..++++++|+++||+
T Consensus 169 ------------------~~i~vi~ng~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~i~~~Grl 210 (388)
T TIGR02149 169 ------------------EKVHVIYNGIDTKEYKPDD--------------------GNVVLDRYGIDRSRPYILFVGRI 210 (388)
T ss_pred ------------------ceEEEecCCCChhhcCCCc--------------------hHHHHHHhCCCCCceEEEEEccc
Confidence 3899999999998776421 11223444555678899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCC-CCCEEe-CCCCCCCcHHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL-YGQVAY-PKHHKQSDVPEIYR 562 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l-~~~V~f-~g~v~~~dl~~ly~ 562 (1057)
.+.||++.+++|+.++. +...+ +++|++++. .++...+.+++..++. ..+|.| .+.++.+++..+|+
T Consensus 211 ~~~Kg~~~li~a~~~l~---~~~~l-~i~g~g~~~-------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 211 TRQKGVPHLLDAVHYIP---KDVQV-VLCAGAPDT-------PEVAEEVRQAVALLDRNRTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred ccccCHHHHHHHHHHHh---hcCcE-EEEeCCCCc-------HHHHHHHHHHHHHhccccCceEEecCCCCHHHHHHHHH
Confidence 99999999999999884 22333 355665542 2245667777777765 234554 67899999999999
Q ss_pred HhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH------HHHHHHHHHHHhCHHH
Q 001541 563 LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ------QSVADALLKLVADKQL 636 (1057)
Q Consensus 563 ~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~------~~la~aI~~ll~d~~~ 636 (1057)
.| |++|+||..|+||++++||||||+|||+|+.||..|++.++.+|+++++.|. ++++++|.+++++++.
T Consensus 280 ~a----Dv~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~~l~~~i~~l~~~~~~ 355 (388)
T TIGR02149 280 NA----EVFVCPSIYEPLGIVNLEAMACGTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQAELAKAINILLADPEL 355 (388)
T ss_pred hC----CEEEeCCccCCCChHHHHHHHcCCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHHHHHHHHHHHHhCHHH
Confidence 99 9999999999999999999999999999999999999999999999999998 9999999999999999
Q ss_pred HHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 637 WARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 637 ~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++++++++.+ ++|||+.++++|.++|+++
T Consensus 356 ~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 356 AKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 999999999998 6899999999999999875
|
This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor. |
| >PRK14099 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=362.85 Aligned_cols=445 Identities=18% Similarity=0.167 Sum_probs=281.8
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCc--ccccCCCCCC
Q 001541 165 KLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEP--TEMLTPRNSD 242 (1057)
Q Consensus 165 ~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~--~e~l~~~~~~ 242 (1057)
+|||++|+.... |+ ..+||..-++-.|.++|+++| |+|.|+++.+..- ....... ...+...-..
T Consensus 3 ~~~il~v~~E~~----p~-----~k~ggl~dv~~~lp~~l~~~g--~~v~v~~P~y~~~--~~~~~~~~~~~~~~~~~~~ 69 (485)
T PRK14099 3 PLRVLSVASEIF----PL-----IKTGGLADVAGALPAALKAHG--VEVRTLVPGYPAV--LAGIEDAEQVHSFPDLFGG 69 (485)
T ss_pred CcEEEEEEeccc----cc-----cCCCcHHHHHHHHHHHHHHCC--CcEEEEeCCCcch--hhhhcCceEEEEEeeeCCc
Confidence 599999997664 23 789999999999999999999 9999999876321 1000000 0001000000
Q ss_pred ccccccCCCCCeEEEEccCCCccccccccc-CC------CChhHHHHHHHHHHHHHHHHHHhhhcCC-CCCcceEEEEcC
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKEL-LW------PHIPEFVDGALNHIIRMSNVLGEQIGGG-KPVWPVAIHGHY 314 (1057)
Q Consensus 243 ~~~~~~~~~~gv~i~rip~~p~~~~l~k~~-l~------~~l~~f~~~~l~~~~~~~k~L~~~~~~~-~~~~pDvIh~h~ 314 (1057)
.+.--....+|+.++-+... .+..+.. +. +|.+ ...++.. ..++..+..... ...+|||||+|.
T Consensus 70 ~~~~~~~~~~~v~~~~~~~~---~~f~r~~~~y~~~~~~~~~d----~~~rf~~-f~~a~~~~~~~~~~~~~pDIiH~Hd 141 (485)
T PRK14099 70 PARLLAARAGGLDLFVLDAP---HLYDRPGNPYVGPDGKDWPD----NAQRFAA-LARAAAAIGQGLVPGFVPDIVHAHD 141 (485)
T ss_pred eEEEEEEEeCCceEEEEeCh---HhhCCCCCCCCCccCCCCCc----HHHHHHH-HHHHHHHHHhhhccCCCCCEEEECC
Confidence 00000111245655554321 1122211 11 2222 2222211 111111212111 125799999999
Q ss_pred CCchHHHHHHHh--cCCCCEEEEecCCchhh-H--HHHHHhhhcchHHHH-HHHHHHHHHHHHHHHhhcCCEEEecCHHH
Q 001541 315 ADAGDSAALLSG--ALNVPMLFTGHSLGRDK-L--EQLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQE 388 (1057)
Q Consensus 315 ~~~~~~a~~l~~--~~~iP~V~t~H~l~~~~-~--~~l~~~g~~~~~~~~-~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~ 388 (1057)
|.++.++.++.. ..++|+|+|+|++.... + ..+...|. ....+. ....+...+...+.++..||.|+|+|+..
T Consensus 142 w~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~k~~i~~ad~vitVS~~~ 220 (485)
T PRK14099 142 WQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPRELLGALGL-PPSAFSLDGVEYYGGIGYLKAGLQLADRITTVSPTY 220 (485)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCHHHHHHcCC-ChHHcCchhhhhCCCccHHHHHHHhcCeeeecChhH
Confidence 999888877753 34789999999985422 1 11111111 111110 00011112223566899999999999988
Q ss_pred HHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCc-hHHHHH
Q 001541 389 IEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP-IWSEIM 467 (1057)
Q Consensus 389 ~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 467 (1057)
.+++...+.+.. +...|+ ....++.+||||||.+.|.|....... ..+....-..... ......
T Consensus 221 a~ei~~~~~g~g--l~~~l~-----------~~~~ki~vI~NGID~~~f~p~~~~~~~--~~~~~~~~~~k~~~k~~l~~ 285 (485)
T PRK14099 221 ALEIQGPEAGMG--LDGLLR-----------QRADRLSGILNGIDTAVWNPATDELIA--ATYDVETLAARAANKAALQA 285 (485)
T ss_pred HHHHhcccCCcC--hHHHHH-----------hhCCCeEEEecCCchhhccccccchhh--hcCChhHHHhHHHhHHHHHH
Confidence 877654322110 001111 123489999999999999875421100 0000000000000 112233
Q ss_pred hhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCC
Q 001541 468 RFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 468 ~~~~~--~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~ 544 (1057)
++..+ ++.++|+++||+.++||++.+++|+..+.+ . ++. +|+|+|+. ++...+.+++.+++ +
T Consensus 286 ~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~--~--~~~lvivG~G~~---------~~~~~l~~l~~~~~--~ 350 (485)
T PRK14099 286 RFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLG--E--GAQLALLGSGDA---------ELEARFRAAAQAYP--G 350 (485)
T ss_pred HcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHh--c--CcEEEEEecCCH---------HHHHHHHHHHHHCC--C
Confidence 44443 357899999999999999999999998863 2 334 57788752 23456777777764 3
Q ss_pred CE-EeCCCCCCCcHHHHHH-HhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC---------CceE
Q 001541 545 QV-AYPKHHKQSDVPEIYR-LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL---------DNGL 613 (1057)
Q Consensus 545 ~V-~f~g~v~~~dl~~ly~-~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~---------~~Gl 613 (1057)
++ .|.|+ .++++.+|. .| |+||+||.+||||++.+||||||+|+|++++||+.|+|.++ .+|+
T Consensus 351 ~v~~~~G~--~~~l~~~~~a~a----Difv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~ 424 (485)
T PRK14099 351 QIGVVIGY--DEALAHLIQAGA----DALLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGV 424 (485)
T ss_pred CEEEEeCC--CHHHHHHHHhcC----CEEEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceE
Confidence 44 78998 689999885 57 99999999999999999999999988889999999998765 5899
Q ss_pred EeCCCCHHHHHHHHHH---HHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 614 LVDPHDQQSVADALLK---LVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 614 lv~p~d~~~la~aI~~---ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
+|+|.|+++|+++|.+ ++++++.|+++++++++ +.|||+..+++|+++|+++..
T Consensus 425 l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y~~lY~~l~~ 481 (485)
T PRK14099 425 QFSPVTADALAAALRKTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHYAALYRSLVA 481 (485)
T ss_pred EeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHHHHHHHHHHh
Confidence 9999999999999997 67799999999999863 689999999999999998764
|
|
| >PRK14098 glycogen synthase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-36 Score=358.96 Aligned_cols=451 Identities=14% Similarity=0.154 Sum_probs=285.5
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCC-CccCCc--ccccCC--C
Q 001541 165 KLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVD-WSYGEP--TEMLTP--R 239 (1057)
Q Consensus 165 ~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~-~~y~~~--~e~l~~--~ 239 (1057)
.|||++|+.... |+ ..+||..-++-.|.++|+++| |+|.|+++.+..-... ...... ...+.. +
T Consensus 5 ~~~il~v~~E~~----p~-----~k~Ggl~dv~~~Lp~al~~~g--~~v~v~~P~y~~~~~~~~~~~~~~~~~~~~~~~~ 73 (489)
T PRK14098 5 NFKVLYVSGEVS----PF-----VRVSALADFMASFPQALEEEG--FEARIMMPKYGTINDRKFRLHDVLRLSDIEVPLK 73 (489)
T ss_pred CcEEEEEeecch----hh-----cccchHHHHHHHHHHHHHHCC--CeEEEEcCCCCchhhhhhccccceEEEEEEEeec
Confidence 399999997654 33 789999999999999999999 9999999876321100 000000 000000 0
Q ss_pred CCCcccc-ccC--CCCCeEEEEccCCCcccccccccCCCCh---hHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEc
Q 001541 240 NSDDFMD-DMG--ESSGAYIIRIPFGPKDKYIAKELLWPHI---PEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGH 313 (1057)
Q Consensus 240 ~~~~~~~-~~~--~~~gv~i~rip~~p~~~~l~k~~l~~~l---~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h 313 (1057)
....... ... ...++.++.+... .+..+..+...- ..+.+...++..- .++..+.+.. ...+|||||+|
T Consensus 74 ~~~~~~~~~~~~~~~~~v~~~~~~~~---~~f~r~~~y~~~~~g~~~~d~~~rf~~f-~~a~l~~~~~-~~~~pDiiH~h 148 (489)
T PRK14098 74 EKTDLLHVKVTALPSSKIQTYFLYNE---KYFKRNGLFTDMSLGGDLKGSAEKVIFF-NVGVLETLQR-LGWKPDIIHCH 148 (489)
T ss_pred CeeEEEEEEEecccCCCceEEEEeCH---HHcCCCCcCCCCccCCCCCcHHHHHHHH-HHHHHHHHHh-cCCCCCEEEec
Confidence 0000000 000 1113444443321 122222222110 0011222222211 1111121211 12579999999
Q ss_pred CCCchHHHHHHHhcC-------CCCEEEEecCCchhhHH--HHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 314 YADAGDSAALLSGAL-------NVPMLFTGHSLGRDKLE--QLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 314 ~~~~~~~a~~l~~~~-------~iP~V~t~H~l~~~~~~--~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.|.++.++.+++... ++|+|+|+|++...... ..+.. .++.............+...+.++..||.|+|+
T Consensus 149 dw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~-~~~~~~~~~~~~~~~~~n~lk~~i~~ad~VitV 227 (489)
T PRK14098 149 DWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQK-LLPEEVCSGLHREGDEVNMLYTGVEHADLLTTT 227 (489)
T ss_pred CcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHH-hCCHHhhhhhhhcCCcccHHHHHHHhcCcceee
Confidence 999999888887544 89999999997542110 00000 011111111101111233456789999999999
Q ss_pred CHHHHHHHHhh-hCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCC-Cch
Q 001541 385 TRQEIEEQWRL-YDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPD-PPI 462 (1057)
Q Consensus 385 S~~~~~~~~~~-y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~-~~~ 462 (1057)
|+...+++... ..++ .+...|+.+ ..++.+||||||.+.|.|..... ....+........ ...
T Consensus 228 S~~~a~ei~~~~~~~~--gl~~~l~~~-----------~~kl~~I~NGID~~~~~p~~d~~--~~~~~~~~~~~~k~~~k 292 (489)
T PRK14098 228 SPRYAEEIAGDGEEAF--GLDKVLEER-----------KMRLHGILNGIDTRQWNPSTDKL--IKKRYSIERLDGKLENK 292 (489)
T ss_pred CHHHHHHhCcCCCCCc--ChHHHHHhc-----------CCCeeEEeCCccccccCCccccc--ccccCCcchhhhHHHHH
Confidence 99988876431 1111 122222221 23899999999999998754211 0000000000000 001
Q ss_pred HHHHHhhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDK 539 (1057)
Q Consensus 463 ~~~~~~~~~~--~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~ 539 (1057)
...++++..+ ++.++|+++||+.+.||++.+++|+.++.+ . ++. +|+|+|+. .+...+.+++.+
T Consensus 293 ~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~--~--~~~lvivG~G~~---------~~~~~l~~l~~~ 359 (489)
T PRK14098 293 KALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVE--L--DIQLVICGSGDK---------EYEKRFQDFAEE 359 (489)
T ss_pred HHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHh--c--CcEEEEEeCCCH---------HHHHHHHHHHHH
Confidence 1222333333 467899999999999999999999999863 2 444 47788753 245677788887
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc----CCceEEe
Q 001541 540 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV----LDNGLLV 615 (1057)
Q Consensus 540 ~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~----~~~Gllv 615 (1057)
++ ++|.|.|.++.+++..+|+.| |+||+||..|+||++.+|||+||+|+|++++||..|++.+ +.+|++|
T Consensus 360 ~~--~~V~~~g~~~~~~~~~~~a~a----Di~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~ 433 (489)
T PRK14098 360 HP--EQVSVQTEFTDAFFHLAIAGL----DMLLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIF 433 (489)
T ss_pred CC--CCEEEEEecCHHHHHHHHHhC----CEEEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEe
Confidence 74 689999999888899999999 9999999999999999999999999999999999988864 6799999
Q ss_pred CCCCHHHHHHHHHHHH---hCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 001541 616 DPHDQQSVADALLKLV---ADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll---~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
++.|+++++++|.+++ .+++.|+++++++++ +.|||+..+++|+++|+++.
T Consensus 434 ~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~~lY~~~~ 487 (489)
T PRK14098 434 HDYTPEALVAKLGEALALYHDEERWEELVLEAME--RDFSWKNSAEEYAQLYRELL 487 (489)
T ss_pred CCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHHHHHHHHh
Confidence 9999999999999865 588888888776632 68999999999999999765
|
|
| >cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-35 Score=340.87 Aligned_cols=365 Identities=21% Similarity=0.309 Sum_probs=265.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++++ + |..||.++++.+|+++|++.| |+|+|+|... +.. .
T Consensus 1 mki~~~~---~-----------p~~gG~~~~~~~la~~L~~~G--~~v~v~~~~~--~~~-----~-------------- 43 (371)
T cd04962 1 MKIGIVC---Y-----------PTYGGSGVVATELGKALARRG--HEVHFITSSR--PFR-----L-------------- 43 (371)
T ss_pred CceeEEE---E-----------eCCCCccchHHHHHHHHHhcC--CceEEEecCC--Ccc-----h--------------
Confidence 7899997 2 568999999999999999999 9999998753 110 0
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
....+++.+..++.... +......+. ... ...+.+.+.+ .+||+||+|++........++
T Consensus 44 --~~~~~~~~~~~~~~~~~----~~~~~~~~~----~~~---~~~l~~~i~~-------~~~divh~~~~~~~~~~~~~~ 103 (371)
T cd04962 44 --DEYSPNIFFHEVEVPQY----PLFQYPPYD----LAL---ASKIAEVAKR-------YKLDLLHVHYAVPHAVAAYLA 103 (371)
T ss_pred --hhhccCeEEEEeccccc----chhhcchhH----HHH---HHHHHHHHhc-------CCccEEeecccCCccHHHHHH
Confidence 00113444443332111 000000110 011 1112222222 579999999864333322222
Q ss_pred ----hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCCh
Q 001541 326 ----GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1057)
Q Consensus 326 ----~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1057)
+..++|+|++.|+...... +. ...+ +. .++.+++.+|.|++.|+...+.+...+.
T Consensus 104 ~~~~~~~~~~~i~~~h~~~~~~~------~~------~~~~---~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~---- 162 (371)
T cd04962 104 REILGKKDLPVVTTLHGTDITLV------GQ------DPSF---QP--ATRFSIEKSDGVTAVSESLRQETYELFD---- 162 (371)
T ss_pred HHhcCcCCCcEEEEEcCCccccc------cc------cccc---hH--HHHHHHhhCCEEEEcCHHHHHHHHHhcC----
Confidence 2238999999997633211 00 0011 11 2345789999999999987766544331
Q ss_pred HHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEE
Q 001541 402 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILAL 481 (1057)
Q Consensus 402 ~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~v 481 (1057)
...++.+||||+|...|.+.... ....++...+++++++++
T Consensus 163 -------------------~~~~i~vi~n~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~il~~ 203 (371)
T cd04962 163 -------------------ITKEIEVIPNFVDEDRFRPKPDE--------------------ALKRRLGAPEGEKVLIHI 203 (371)
T ss_pred -------------------CcCCEEEecCCcCHhhcCCCchH--------------------HHHHhcCCCCCCeEEEEe
Confidence 11279999999998776542210 112334445678899999
Q ss_pred eCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHH
Q 001541 482 ARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 560 (1057)
Q Consensus 482 GRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~l 560 (1057)
||+.+.||++.+++|+..+... .+.. +++|.+++ ...+.+++.++++.++|.|+|.. +++..+
T Consensus 204 g~l~~~K~~~~li~a~~~l~~~---~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~~--~~~~~~ 267 (371)
T cd04962 204 SNFRPVKRIDDVIRIFAKVRKE---VPARLLLVGDGPE-----------RSPAERLARELGLQDDVLFLGKQ--DHVEEL 267 (371)
T ss_pred cccccccCHHHHHHHHHHHHhc---CCceEEEEcCCcC-----------HHHHHHHHHHcCCCceEEEecCc--ccHHHH
Confidence 9999999999999999998642 2233 57788765 35567788889998899999974 689999
Q ss_pred HHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHH
Q 001541 561 YRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARC 640 (1057)
Q Consensus 561 y~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~ 640 (1057)
|+.| |++|+||..|+||++++|||+||+|||+|+.||..|++.++.+|++++++|.++++++|.+++++++.+.++
T Consensus 268 ~~~~----d~~v~ps~~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~l~~~i~~l~~~~~~~~~~ 343 (371)
T cd04962 268 LSIA----DLFLLPSEKESFGLAALEAMACGVPVVASNAGGIPEVVKHGETGFLVDVGDVEAMAEYALSLLEDDELWQEF 343 (371)
T ss_pred HHhc----CEEEeCCCcCCCccHHHHHHHcCCCEEEeCCCCchhhhcCCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHH
Confidence 9999 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 641 RQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 641 ~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++++.+ ++|||+.++++|.++|+++
T Consensus 344 ~~~~~~~~~~~fs~~~~~~~~~~~y~~~ 371 (371)
T cd04962 344 SRAARNRAAERFDSERIVPQYEALYRRL 371 (371)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 99999997 7999999999999999763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-35 Score=340.61 Aligned_cols=366 Identities=21% Similarity=0.231 Sum_probs=267.4
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
+|++|..+. ..||+++++.+|+++|.+.| +++.|++....+ . +..
T Consensus 3 ~il~ii~~~-------------~~GG~e~~~~~l~~~l~~~~--~~~~v~~~~~~~-~----~~~--------------- 47 (374)
T TIGR03088 3 LIVHVVYRF-------------DVGGLENGLVNLINHLPADR--YRHAVVALTEVS-A----FRK--------------- 47 (374)
T ss_pred eEEEEeCCC-------------CCCcHHHHHHHHHhhccccc--cceEEEEcCCCC-h----hHH---------------
Confidence 788887322 47999999999999999998 999998753211 0 000
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
.....|+.+++++..+. ..+ .+ +.++.+.+.+ .+|||||+|... ...+..++.
T Consensus 48 -~~~~~~i~~~~~~~~~~----------~~~-~~-------~~~l~~~l~~-------~~~Divh~~~~~-~~~~~~~~~ 100 (374)
T TIGR03088 48 -RIQRPDVAFYALHKQPG----------KDV-AV-------YPQLYRLLRQ-------LRPDIVHTRNLA-ALEAQLPAA 100 (374)
T ss_pred -HHHhcCceEEEeCCCCC----------CCh-HH-------HHHHHHHHHH-------hCCCEEEEcchh-HHHHHHHHH
Confidence 01123778887764321 000 11 1122222333 579999999753 333444555
Q ss_pred cCCCCE-EEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 327 ALNVPM-LFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 327 ~~~iP~-V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
..++|. +++.|+....... + ....+++. ++.....+|.++++|+...+.+...+
T Consensus 101 ~~~~~~~i~~~h~~~~~~~~-----~------~~~~~~~~-----~~~~~~~~~~~i~vs~~~~~~~~~~~--------- 155 (374)
T TIGR03088 101 LAGVPARIHGEHGRDVFDLD-----G------SNWKYRWL-----RRLYRPLIHHYVAVSRDLEDWLRGPV--------- 155 (374)
T ss_pred hcCCCeEEEeecCcccccch-----h------hHHHHHHH-----HHHHHhcCCeEEEeCHHHHHHHHHhc---------
Confidence 567775 6677754221110 0 00112222 23356678999999998766554332
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
|.+..++.+||||+|.+.|.+..... ...........++++|+++||+.
T Consensus 156 -------------~~~~~~~~vi~ngvd~~~~~~~~~~~------------------~~~~~~~~~~~~~~~i~~vGrl~ 204 (374)
T TIGR03088 156 -------------KVPPAKIHQIYNGVDTERFHPSRGDR------------------SPILPPDFFADESVVVGTVGRLQ 204 (374)
T ss_pred -------------CCChhhEEEeccCccccccCCCccch------------------hhhhHhhcCCCCCeEEEEEecCC
Confidence 22223899999999998886532110 01112223345678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCC--CcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHH
Q 001541 486 PKKNITTLVKAFGECRPLREL--ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYR 562 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~--~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~ 562 (1057)
+.||++.+++|+.++....+. +++.| ++|+++. ...+.++++.+++..+|.|+|. .+++..+|+
T Consensus 205 ~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~ 271 (374)
T TIGR03088 205 AVKDQPTLVRAFALLVRQLPEGAERLRLVIVGDGPA-----------RGACEQMVRAAGLAHLVWLPGE--RDDVPALMQ 271 (374)
T ss_pred cccCHHHHHHHHHHHHHhCcccccceEEEEecCCch-----------HHHHHHHHHHcCCcceEEEcCC--cCCHHHHHH
Confidence 999999999999998754432 35665 7788764 3567788889999899999996 689999999
Q ss_pred HhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001541 563 LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ 642 (1057)
Q Consensus 563 ~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1057)
.| |++|+||..||||++++||||||+|||+|+.||..|++.++.+|++++++|+++++++|.+++++++.++.+++
T Consensus 272 ~a----di~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~~~~~~~~ 347 (374)
T TIGR03088 272 AL----DLFVLPSLAEGISNTILEAMASGLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVSDPAARRAHGA 347 (374)
T ss_pred hc----CEEEeccccccCchHHHHHHHcCCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 643 NGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 643 ~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++.+ ++|||+.++++|.++|.++
T Consensus 348 ~a~~~~~~~fs~~~~~~~~~~~y~~~ 373 (374)
T TIGR03088 348 AGRARAEQQFSINAMVAAYAGLYDQL 373 (374)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 999998 7999999999999999875
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-35 Score=344.25 Aligned_cols=279 Identities=19% Similarity=0.242 Sum_probs=228.1
Q ss_pred CcceEEEEcCCCchHHHHHHHh--cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEE
Q 001541 305 VWPVAIHGHYADAGDSAALLSG--ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 382 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~--~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi 382 (1057)
..||+||+|++.++..+..++. .++.|.++|+|+....... . ...+.. ..+..++++|.|+
T Consensus 117 ~~~diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~-~-----------~~~~~~-----~~~~~~~~ad~vv 179 (406)
T PRK15427 117 FVADVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSRE-V-----------LNHYTP-----EYQQLFRRGDLML 179 (406)
T ss_pred CCCCEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccch-h-----------hhhhhH-----HHHHHHHhCCEEE
Confidence 5699999999887777777765 4566889999976422110 0 001110 1234578999999
Q ss_pred ecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
++|+...+.+... +. +..++.+||||+|.+.|.+.....
T Consensus 180 ~~S~~~~~~l~~~--g~---------------------~~~ki~vi~nGvd~~~f~~~~~~~------------------ 218 (406)
T PRK15427 180 PISDLWAGRLQKM--GC---------------------PPEKIAVSRMGVDMTRFSPRPVKA------------------ 218 (406)
T ss_pred ECCHHHHHHHHHc--CC---------------------CHHHEEEcCCCCCHHHcCCCcccc------------------
Confidence 9999877665432 12 223899999999999886432110
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcC
Q 001541 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 541 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~ 541 (1057)
..+...|+++||+.+.||++.+++|+..+.+. .+++.+ |+|+|+. ..++.+++.+++
T Consensus 219 ---------~~~~~~il~vGrl~~~Kg~~~ll~a~~~l~~~--~~~~~l~ivG~G~~-----------~~~l~~~~~~~~ 276 (406)
T PRK15427 219 ---------PATPLEIISVARLTEKKGLHVAIEACRQLKEQ--GVAFRYRILGIGPW-----------ERRLRTLIEQYQ 276 (406)
T ss_pred ---------CCCCeEEEEEeCcchhcCHHHHHHHHHHHHhh--CCCEEEEEEECchh-----------HHHHHHHHHHcC
Confidence 13446799999999999999999999998643 346665 8898864 467888999999
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCC------CCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEe
Q 001541 542 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 615 (1057)
Q Consensus 542 l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~------Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 615 (1057)
+.++|.|+|+++++++.++|+.| |+||+||.. ||||++++||||||+|||+|+.||..|++.++.+|+++
T Consensus 277 l~~~V~~~G~~~~~el~~~l~~a----Dv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~~~G~lv 352 (406)
T PRK15427 277 LEDVVEMPGFKPSHEVKAMLDDA----DVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEADKSGWLV 352 (406)
T ss_pred CCCeEEEeCCCCHHHHHHHHHhC----CEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCCCceEEe
Confidence 99999999999999999999999 999999974 99999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 616 DPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
+|+|+++++++|.++++ |+++++++++++++.+ ++|+|+..++++.++|+++
T Consensus 353 ~~~d~~~la~ai~~l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~~~ 406 (406)
T PRK15427 353 PENDAQALAQRLAAFSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQAL 406 (406)
T ss_pred CCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 99999999999999999 9999999999999999 6999999999999999753
|
|
| >cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.4e-35 Score=350.50 Aligned_cols=444 Identities=18% Similarity=0.134 Sum_probs=280.4
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccc-c--C-CCCCC
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEM-L--T-PRNSD 242 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~-l--~-~~~~~ 242 (1057)
||++||.... ....+||...++..|+++|+++| |+|+|+++.+..-...+........ . . .....
T Consensus 1 ~Il~v~~E~~---------p~~k~GGl~~~~~~L~~aL~~~G--~~V~Vi~p~y~~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (476)
T cd03791 1 KVLFVASEVA---------PFAKTGGLGDVVGALPKALAKLG--HDVRVIMPKYGRILDELRGQLLVLRLFGVPVGGRPE 69 (476)
T ss_pred CEEEEEcccc---------ccccCCcHHHHHHHHHHHHHHCC--CeEEEEecCCcchhhHhccCeEEEEEEeeccCCcee
Confidence 5899986443 23479999999999999999999 9999999876421110000000000 0 0 00000
Q ss_pred ccccccCCCCCeEEEEccCCCcccccccc-----cCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKE-----LLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA 317 (1057)
Q Consensus 243 ~~~~~~~~~~gv~i~rip~~p~~~~l~k~-----~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~ 317 (1057)
.........+|+.+++++.... ..+. ...+|...... +..+.......+.+ . ..+|||||+|.|.+
T Consensus 70 ~~~~~~~~~~gv~~~~l~~~~~---~~~~~~~~~~~~~~~~~~~~-~~~f~~~~~~~l~~----~-~~~pDviH~hd~~t 140 (476)
T cd03791 70 YVGVFELPVDGVPVYFLDNPDY---FDRPGLYDDSGYDYEDNAER-FALFSRAALELLRR----L-GWKPDIIHCHDWHT 140 (476)
T ss_pred EEEEEEEEeCCceEEEEcChHH---cCCCCCCCccCCCCccHHHH-HHHHHHHHHHHHHh----c-CCCCcEEEECchHH
Confidence 0000011235788888765321 1111 11222221111 11111111111211 1 25799999999998
Q ss_pred hHHHHHHHhc------CCCCEEEEecCCchhhH---HHHHHhhhcc-hHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHH
Q 001541 318 GDSAALLSGA------LNVPMLFTGHSLGRDKL---EQLLKQARLS-RDEINATYKIMRRIEAEELSLDASEIVITSTRQ 387 (1057)
Q Consensus 318 ~~~a~~l~~~------~~iP~V~t~H~l~~~~~---~~l~~~g~~~-~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~ 387 (1057)
+.++..++.. .++|+|+|.|++..... ..+...+... .......+.....+..++.++..||.|+++|+.
T Consensus 141 ~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~ 220 (476)
T cd03791 141 GLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWEELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPT 220 (476)
T ss_pred HHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCccchhhhcccccCCcccHHHHHHHhcCcCeecCHh
Confidence 8888887766 38999999999854321 1111110000 000000001112233567789999999999998
Q ss_pred HHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch-HHHH
Q 001541 388 EIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI-WSEI 466 (1057)
Q Consensus 388 ~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 466 (1057)
..++....+.+.. +...+ .....++.+||||||.+.|.|....... ..+........... ...+
T Consensus 221 ~~~~i~~~~~~~g--l~~~~-----------~~~~~ki~~I~NGid~~~~~p~~~~~~~--~~~~~~~~~~~~~~k~~l~ 285 (476)
T cd03791 221 YAREILTPEFGEG--LDGLL-----------RARAGKLSGILNGIDYDVWNPATDPHLP--ANYSADDLEGKAENKAALQ 285 (476)
T ss_pred HHHHhCCCCCCcc--hHHHH-----------HhccCCeEEEeCCCcCcccCccccchhh--hcCCccccccHHHHHHHHH
Confidence 7777543211110 00000 1122489999999999999865321100 00000000000111 1122
Q ss_pred HhhhC--CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 467 MRFFT--NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 467 ~~~~~--~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
.++.. .++.++|+++||+.+.||++.+++|+..+.+. . +. +++|+++. .+...+.+++.++ .
T Consensus 286 ~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~--~~lvi~G~g~~---------~~~~~~~~~~~~~--~ 350 (476)
T cd03791 286 EELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLEL--G--GQLVILGSGDP---------EYEEALRELAARY--P 350 (476)
T ss_pred HHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHc--C--cEEEEEecCCH---------HHHHHHHHHHHhC--C
Confidence 33333 36889999999999999999999999998642 2 44 47787742 2345666666665 4
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCC------ceEEeCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD------NGLLVDP 617 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~------~Gllv~p 617 (1057)
+++.|.+..+.+.+..+|+.| |++|+||..||||++++|||+||+|||+++.||+.|++.++. +|++++|
T Consensus 351 ~~v~~~~~~~~~~~~~~~~~a----Dv~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~ 426 (476)
T cd03791 351 GRVAVLIGYDEALAHLIYAGA----DFFLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEG 426 (476)
T ss_pred CcEEEEEeCCHHHHHHHHHhC----CEEECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCC
Confidence 677776666667788999999 999999999999999999999999999999999999999887 9999999
Q ss_pred CCHHHHHHHHHHHHh---CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 618 HDQQSVADALLKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~---d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
.|+++++++|.++++ +++.++++++++++ ..|||+.++++|+++|++
T Consensus 427 ~~~~~l~~~i~~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~~y~~ 476 (476)
T cd03791 427 YNADALLAALRRALALYRDPEAWRKLQRNAMA--QDFSWDRSAKEYLELYRS 476 (476)
T ss_pred CCHHHHHHHHHHHHHHHcCHHHHHHHHHHHhc--cCCChHHHHHHHHHHHhC
Confidence 999999999999886 67788888777654 479999999999999863
|
Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms. |
| >cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-34 Score=339.04 Aligned_cols=377 Identities=17% Similarity=0.178 Sum_probs=254.5
Q ss_pred HHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccccccCCCC
Q 001541 197 VVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPH 276 (1057)
Q Consensus 197 v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~ 276 (1057)
..+||++|+++| |+|+++|.... +.. ..|+++++++.++.. .+ ..++|
T Consensus 13 ~~~la~~L~~~G--~~v~~~~~~~~-~~~-------------------------~~~v~~~~~~~~~~~---~~-~~~~~ 60 (396)
T cd03818 13 FRHLAPALAAQG--HEVVFLTEPNA-APP-------------------------PGGVRVVRYRPPRGP---TS-GTHPY 60 (396)
T ss_pred HHHHHHHHHHCC--CEEEEEecCCC-CCC-------------------------CCCeeEEEecCCCCC---CC-CCCcc
Confidence 356999999998 99999998642 110 016899998865541 12 56778
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHH-HHhhhcc
Q 001541 277 IPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQL-LKQARLS 354 (1057)
Q Consensus 277 l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l-~~~g~~~ 354 (1057)
+..+...+..... +.+.+.... .++.+|||||+|.... .+..++.. .++|+|.+.|.++....... .......
T Consensus 61 ~~~~~~~~~~~~~-~~~~~~~~~--~~~~~pdvi~~h~~~~--~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 135 (396)
T cd03818 61 LREFEEAVLRGQA-VARALLALR--AKGFRPDVIVAHPGWG--ETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPP 135 (396)
T ss_pred chhHHHHHHHHHH-HHHHHHHHH--hcCCCCCEEEECCccc--hhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCC
Confidence 8777665543322 222222221 1336799999997432 12223333 46899887654332110000 0000000
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCC
Q 001541 355 RDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEF 434 (1057)
Q Consensus 355 ~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~ 434 (1057)
. .....++..+.......+..||.||++|+...+.+...+. .++.|||||+|.
T Consensus 136 ~--~~~~~~~~~~~~~~~~~~~~ad~vi~~s~~~~~~~~~~~~-------------------------~ki~vI~ngvd~ 188 (396)
T cd03818 136 S--LDDALRLRNRNALILLALAQADAGVSPTRWQRSTFPAELR-------------------------SRISVIHDGIDT 188 (396)
T ss_pred c--hhHHHHHHHhhhHhHHHHHhCCEEECCCHHHHhhCcHhhc-------------------------cceEEeCCCccc
Confidence 0 0001111111112446799999999999987665332221 289999999999
Q ss_pred CCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEE-E
Q 001541 435 HHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALAR-PDPKKNITTLVKAFGECRPLRELANLTL-I 512 (1057)
Q Consensus 435 ~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGR-l~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-I 512 (1057)
+.|.|....... ........++.++|+|+|| +.+.||++.+++|+..+.+. .+++.+ |
T Consensus 189 ~~f~~~~~~~~~------------------~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~--~~~~~lvi 248 (396)
T cd03818 189 DRLRPDPQARLR------------------LPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRA--RPDARVVI 248 (396)
T ss_pred cccCCCchhhhc------------------ccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHH--CCCcEEEE
Confidence 998764311000 0000112356789999998 99999999999999998754 345554 6
Q ss_pred EecCC-CCcccchhhHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc
Q 001541 513 MGNRD-GIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH 590 (1057)
Q Consensus 513 vG~~~-~~~~~~~~~~~~~~~l~~l~~-~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~ 590 (1057)
+|++. .+.........+...+.+... +++ .++|.|+|+++.++++.+|+.| |++|+||..|+||++++|||||
T Consensus 249 vG~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~V~f~G~v~~~~~~~~l~~a----dv~v~~s~~e~~~~~llEAmA~ 323 (396)
T cd03818 249 VGGDGVSYGAPPPDGESWKQHMLDELGGRLD-LSRVHFLGRVPYDQYLALLQVS----DVHVYLTYPFVLSWSLLEAMAC 323 (396)
T ss_pred EcCCCcccCCCCCCcccHHHHHHHHhhcccC-cceEEEeCCCCHHHHHHHHHhC----cEEEEcCcccccchHHHHHHHC
Confidence 67532 111111101112223222222 223 3789999999999999999999 9999999999999999999999
Q ss_pred CCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 001541 591 GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 662 (1057)
Q Consensus 591 G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~ 662 (1057)
|+|||+|+.||..|++.++.+|++++|.|+++++++|.++++++++++++++++++.+ ++|||+.++++|++
T Consensus 324 G~PVIas~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~~~~~~l~~~ar~~~~~~fs~~~~~~~~~~ 396 (396)
T cd03818 324 GCLVVGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDPARRARLRRAARRTALRYDLLSVCLPRQLA 396 (396)
T ss_pred CCCEEEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhccHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999 57999999999863
|
ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II). |
| >cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-34 Score=336.12 Aligned_cols=387 Identities=19% Similarity=0.211 Sum_probs=266.0
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||+++.+.. ..||+++++.+||++|++.| |+|+|+|..... . ..+.
T Consensus 1 mkIl~~~~~~-------------~~gG~e~~~~~la~~L~~~G--~~V~v~~~~~~~--~-~~~~--------------- 47 (392)
T cd03805 1 LRVAFIHPDL-------------GIGGAERLVVDAALALQSRG--HEVTIYTSHHDP--S-HCFE--------------- 47 (392)
T ss_pred CeEEEECCCC-------------CCchHHHHHHHHHHHHHhCC--CeEEEEcCCCCc--h-hcch---------------
Confidence 7899996322 37999999999999999999 999999874311 0 0000
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
+. ...++.+..++. ++++. ++.....+ ..++......+...+ ....+||+||+|....+..+. .
T Consensus 48 -~~-~~~~~~i~~~~~-----~~~~~-~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~Dvi~~~~~~~~~~~~--~ 111 (392)
T cd03805 48 -ET-KDGTLPVRVRGD-----WLPRS-IFGRFHIL----CAYLRMLYLALYLLL--LPDEKYDVFIVDQVSACVPLL--K 111 (392)
T ss_pred -hc-cCCeeEEEEEeE-----EEcch-hhHhHHHH----HHHHHHHHHHHHHHh--cccCCCCEEEEcCcchHHHHH--H
Confidence 00 011244433221 11111 11111111 111111111111001 112579999999765443322 2
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHH-HHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYK-IMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk-~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
...+.|+|++.|... .. ... ........++ .+.. .|+++++.+|.|+++|+...+.+...+.....
T Consensus 112 ~~~~~~~i~~~h~~~--~~---~~~---~~~~~~~~~~~~~~~--~e~~~~~~ad~ii~~s~~~~~~~~~~~~~~~~--- 178 (392)
T cd03805 112 LFSPSKILFYCHFPD--QL---LAQ---RGSLLKRLYRKPFDW--LEEFTTGMADKIVVNSNFTASVFKKTFPSLAK--- 178 (392)
T ss_pred HhcCCcEEEEEecCh--HH---hcC---CCcHHHHHHHHHHHH--HHHHHhhCceEEEEcChhHHHHHHHHhccccc---
Confidence 223489999999432 11 100 0111122222 2223 37789999999999999877766554432211
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
..+.|||||+|.+.|.+..... ........++.++|+++||+
T Consensus 179 ------------------~~~~vi~n~vd~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~grl 220 (392)
T cd03805 179 ------------------NPREVVYPCVDTDSFESTSEDP--------------------DPGLLIPKSGKKTFLSINRF 220 (392)
T ss_pred ------------------CCcceeCCCcCHHHcCcccccc--------------------cccccccCCCceEEEEEeee
Confidence 1346999999998886532110 01112234677899999999
Q ss_pred CCCCCHHHHHHHHHhcccccC-CCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHH-cCCCCCEEeCCCCCCCcHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRE-LANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK-YDLYGQVAYPKHHKQSDVPEIY 561 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~-~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~-~~l~~~V~f~g~v~~~dl~~ly 561 (1057)
.+.||++.+++|+.++....+ .+++.| ++|+++.. .....++..++.+++++ +++.++|.|+|+++.+++..+|
T Consensus 221 ~~~Kg~~~ll~a~~~l~~~~~~~~~~~l~i~G~~~~~---~~~~~~~~~~l~~~~~~~~~l~~~V~f~g~~~~~~~~~~l 297 (392)
T cd03805 221 ERKKNIALAIEAFAILKDKLAEFKNVRLVIAGGYDPR---VAENVEYLEELQRLAEELLLLEDQVIFLPSISDSQKELLL 297 (392)
T ss_pred cccCChHHHHHHHHHHHhhcccccCeEEEEEcCCCCC---CchhHHHHHHHHHHHHHhcCCCceEEEeCCCChHHHHHHH
Confidence 999999999999999965321 145664 77876542 11234567889999999 8999999999999999999999
Q ss_pred HHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001541 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 641 (1057)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1057)
+.| |++++||..|+||++++||||||+|||+|+.||..|++.++.+|+++++ |+++++++|.+++++++.+++++
T Consensus 298 ~~a----d~~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a~~i~~l~~~~~~~~~~~ 372 (392)
T cd03805 298 SSA----RALLYTPSNEHFGIVPLEAMYAGKPVIACNSGGPLETVVDGETGFLCEP-TPEEFAEAMLKLANDPDLADRMG 372 (392)
T ss_pred hhC----eEEEECCCcCCCCchHHHHHHcCCCEEEECCCCcHHHhccCCceEEeCC-CHHHHHHHHHHHHhChHHHHHHH
Confidence 999 9999999999999999999999999999999999999999899999976 99999999999999999999999
Q ss_pred HHHHHHh-hcCCHHHHHHHH
Q 001541 642 QNGLKNI-HLFSWPEHCKTY 660 (1057)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~~ 660 (1057)
+++++.+ ++|||+.+++++
T Consensus 373 ~~a~~~~~~~~s~~~~~~~~ 392 (392)
T cd03805 373 AAGRKRVKEKFSTEAFAERL 392 (392)
T ss_pred HHHHHHHHHhcCHHHHhhhC
Confidence 9999998 799999998764
|
ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans. |
| >PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-34 Score=345.68 Aligned_cols=392 Identities=16% Similarity=0.107 Sum_probs=264.2
Q ss_pred Ccce-EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCC--Ce----------eeEEEEecCCCCCCCCCcc
Q 001541 163 GKKL-YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMP--GV----------YRVDLLTRQVSAPDVDWSY 229 (1057)
Q Consensus 163 ~~~m-~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~G--gv----------~~V~vit~~~~~~~~~~~y 229 (1057)
.++. ||++|. +++ ..||+++++.+||.+|.+.+ |- ..|.+++.....+. ..+
T Consensus 278 ~~~~~rIl~vi-~sl------------~~GGAEr~~~~La~~l~~~~~~~~~~~g~g~~~~~~V~~~~~~~~~g~--~~~ 342 (694)
T PRK15179 278 ESFVGPVLMIN-GSL------------GAGGAERQFVNTAVALQSAIQQGQSIAGYGVLGPVQVVCRSLRSREGA--DFF 342 (694)
T ss_pred CCCcceEEEEe-CCC------------CCCcHHHHHHHHHHHHHhcccCcccccCccCCCCcEEEEEecccccCc--chH
Confidence 4556 899997 332 47999999999999999983 00 23444432110000 000
Q ss_pred CCcccccCCCCCCccccccCCCCCeEEEEccCCCccccccccc-CCCChhHH----HHHHHHHHHHHHHHHHhhhcCCCC
Q 001541 230 GEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKEL-LWPHIPEF----VDGALNHIIRMSNVLGEQIGGGKP 304 (1057)
Q Consensus 230 ~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~-l~~~l~~f----~~~~l~~~~~~~k~L~~~~~~~~~ 304 (1057)
.......|+.++.++..+. ....... ....+..+ .......+.++.+.+++
T Consensus 343 ----------------~~~L~~~Gv~v~~l~~~~~-~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~L~~~lk~------- 398 (694)
T PRK15179 343 ----------------AATLADAGIPVSVYSDMQA-WGGCEFSSLLAPYREYLRFLPKQIIEGTTKLTDVMRS------- 398 (694)
T ss_pred ----------------HHHHHhCCCeEEEeccCCc-cCcccccccchhhHHHhhhcchhHHHHHHHHHHHHHH-------
Confidence 0001125778877765432 1111100 01111110 01122223333334443
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEE-EecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLF-TGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~-t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+|||||+|...+..++.++++..++|+|+ +.|++........ ....|+... .......++.+++
T Consensus 399 ~kpDIVH~h~~~a~~lg~lAa~~~gvPvIv~t~h~~~~~~~~~~----------~~~~~~~l~----~~l~~~~~~i~Vs 464 (694)
T PRK15179 399 SVPSVVHIWQDGSIFACALAALLAGVPRIVLSVRTMPPVDRPDR----------YRVEYDIIY----SELLKMRGVALSS 464 (694)
T ss_pred cCCcEEEEeCCcHHHHHHHHHHHcCCCEEEEEeCCCccccchhH----------HHHHHHHHH----HHHHhcCCeEEEe
Confidence 579999999988888888888888999876 6676543221100 011111111 1112234456677
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
+|....+.+...+ |.+..++.|||||||...|.+.... ...+
T Consensus 465 ~S~~~~~~l~~~~----------------------g~~~~kI~VI~NGVd~~~f~~~~~~----------------~~~~ 506 (694)
T PRK15179 465 NSQFAAHRYADWL----------------------GVDERRIPVVYNGLAPLKSVQDDAC----------------TAMM 506 (694)
T ss_pred CcHHHHHHHHHHc----------------------CCChhHEEEECCCcCHHhcCCCchh----------------hHHH
Confidence 7776555443322 2233489999999998887642110 0000
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
... +.....+.++|+++||+.+.||++.+|+|+.++.+. .+++.| |+|+|+. ...+.+++.++++
T Consensus 507 ~~~-~~~~~~~~~vIg~VGRL~~~KG~~~LI~A~a~l~~~--~p~~~LvIvG~G~~-----------~~~L~~l~~~lgL 572 (694)
T PRK15179 507 AQF-DARTSDARFTVGTVMRVDDNKRPFLWVEAAQRFAAS--HPKVRFIMVGGGPL-----------LESVREFAQRLGM 572 (694)
T ss_pred Hhh-ccccCCCCeEEEEEEeCCccCCHHHHHHHHHHHHHH--CcCeEEEEEccCcc-----------hHHHHHHHHHcCC
Confidence 000 111234567999999999999999999999998643 345664 8898764 4668889999999
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH--
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ-- 620 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~-- 620 (1057)
.++|.|+|+. ++++.+|+.| |+||+||.+|+||++++||||||+|||+|+.||+.|+|.++.+|++|+|+|.
T Consensus 573 ~~~V~flG~~--~dv~~ll~aa----Dv~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 573 GERILFTGLS--RRVGYWLTQF----NAFLLLSRFEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred CCcEEEcCCc--chHHHHHHhc----CEEEeccccccchHHHHHHHHcCCeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 9999999995 6899999999 9999999999999999999999999999999999999999999999998874
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
++++++|.+++.+......+++++++++ ++|||+.++++|+++|+
T Consensus 647 ~~La~aL~~ll~~l~~~~~l~~~ar~~a~~~FS~~~~~~~~~~lY~ 692 (694)
T PRK15179 647 PDVAEALARIHDMCAADPGIARKAADWASARFSLNQMIASTVRCYQ 692 (694)
T ss_pred HHHHHHHHHHHhChhccHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 6899999998887666677889999998 69999999999999995
|
|
| >PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-33 Score=328.20 Aligned_cols=369 Identities=17% Similarity=0.211 Sum_probs=262.8
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||+|+..--+ |+ | +...||+++++.++++.|+ ++|+++|.... ++...
T Consensus 4 ~~~~~~~~~~----~~--p-~~~~g~ve~~~~~~~~~l~-----~~~~~~~~~~~------~~~~~-------------- 51 (380)
T PRK15484 4 KIIFTVTPIF----SI--P-PRGAAAVETWIYQVAKRTS-----IPNRIACIKNP------GYPEY-------------- 51 (380)
T ss_pred eEEEEeccCC----CC--C-CccccHHHHHHHHhhhhcc-----CCeeEEEecCC------CCCch--------------
Confidence 7888886555 22 1 1347999999999999993 47999998752 11110
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCCh--hHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHI--PEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALL 324 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l--~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l 324 (1057)
....+|+.++++++... |......|..+ ..+...++..+.. ....++||||+|... .....+.
T Consensus 52 -~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~vi~v~~~~-~~~~~~~ 116 (380)
T PRK15484 52 -TKVNDNCDIHYIGFSRI--YKRLFQKWTRLDPLPYSQRILNIAHK-----------FTITKDSVIVIHNSM-KLYRQIR 116 (380)
T ss_pred -hhccCCCceEEEEeccc--cchhhhhhhccCchhHHHHHHHHHHh-----------cCCCCCcEEEEeCcH-HhHHHHH
Confidence 01124667777755221 11000111000 1112222221111 112469999999853 3334444
Q ss_pred HhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 325 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
.+..+.|+|++.|+.+... .+..++.+|++|+...+.+...+.
T Consensus 117 ~~~~~~~~v~~~h~~~~~~------------------------------~~~~~~~ii~~S~~~~~~~~~~~~------- 159 (380)
T PRK15484 117 ERAPQAKLVMHMHNAFEPE------------------------------LLDKNAKIIVPSQFLKKFYEERLP------- 159 (380)
T ss_pred hhCCCCCEEEEEecccChh------------------------------HhccCCEEEEcCHHHHHHHHhhCC-------
Confidence 5556889999999763211 244678999999887665433221
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
..++.+||||+|...|.+... .....++...+++++|+|+||+
T Consensus 160 -----------------~~~i~vIpngvd~~~~~~~~~--------------------~~~~~~~~~~~~~~~il~~Grl 202 (380)
T PRK15484 160 -----------------NADISIVPNGFCLETYQSNPQ--------------------PNLRQQLNISPDETVLLYAGRI 202 (380)
T ss_pred -----------------CCCEEEecCCCCHHHcCCcch--------------------HHHHHHhCCCCCCeEEEEeccC
Confidence 127899999999887764211 0112234444577899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
.+.||++.|++|+..+.+ ..+++.| |+|+++.... .+...+...+.+++..++ .+|.|.|+++.+++..+|+.
T Consensus 203 ~~~Kg~~~Li~A~~~l~~--~~p~~~lvivG~g~~~~~--~~~~~~~~~l~~~~~~l~--~~v~~~G~~~~~~l~~~~~~ 276 (380)
T PRK15484 203 SPDKGILLLMQAFEKLAT--AHSNLKLVVVGDPTASSK--GEKAAYQKKVLEAAKRIG--DRCIMLGGQPPEKMHNYYPL 276 (380)
T ss_pred ccccCHHHHHHHHHHHHH--hCCCeEEEEEeCCccccc--cchhHHHHHHHHHHHhcC--CcEEEeCCCCHHHHHHHHHh
Confidence 999999999999999864 3456665 7787764221 122346667777777776 57999999999999999999
Q ss_pred hhcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceE-EeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001541 564 AAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGL-LVDPHDQQSVADALLKLVADKQLWARCR 641 (1057)
Q Consensus 564 Aa~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gl-lv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1057)
| |++|+||. .|+||++++||||||+|||+|+.||..|++.++.+|+ +++|.|+++++++|.++++|++. .+++
T Consensus 277 a----Dv~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll~d~~~-~~~~ 351 (380)
T PRK15484 277 A----DLVVVPSQVEEAFCMVAVEAMAAGKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTLADPEL-TQIA 351 (380)
T ss_pred C----CEEEeCCCCccccccHHHHHHHcCCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHHcCHHH-HHHH
Confidence 9 99999996 5999999999999999999999999999999999998 66899999999999999999985 6799
Q ss_pred HHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 642 QNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
+++++.+ ++|||+.++++|+++|+..
T Consensus 352 ~~ar~~~~~~fsw~~~a~~~~~~l~~~ 378 (380)
T PRK15484 352 EQAKDFVFSKYSWEGVTQRFEEQIHNW 378 (380)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHh
Confidence 9999988 7999999999999999764
|
|
| >cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.1e-33 Score=317.95 Aligned_cols=359 Identities=19% Similarity=0.208 Sum_probs=256.7
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.+++ .|..||+++++.+|+++|.++| |+|+|+|........
T Consensus 1 ~i~~i~~~~~----------~~~~gG~~~~~~~la~~L~~~g--~~v~v~~~~~~~~~~--------------------- 47 (363)
T cd04955 1 KIAIIGTRGI----------PAKYGGFETFVEELAPRLVARG--HEVTVYCRSPYPKQK--------------------- 47 (363)
T ss_pred CeEEEecCcC----------CcccCcHHHHHHHHHHHHHhcC--CCEEEEEccCCCCCc---------------------
Confidence 6899988876 3678999999999999999999 999999976421110
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
....+|+.++++|..... .+..+...+ ..+.+.+. ...++|+||...+.. ..+..+.+
T Consensus 48 -~~~~~~i~~~~~~~~~~~----------~~~~~~~~~----~~~~~~~~------~~~~~~~i~~~~~~~-~~~~~~~~ 105 (363)
T cd04955 48 -ETEYNGVRLIHIPAPEIG----------GLGTIIYDI----LAILHALF------VKRDIDHVHALGPAI-APFLPLLR 105 (363)
T ss_pred -ccccCCceEEEcCCCCcc----------chhhhHHHH----HHHHHHHh------ccCCeEEEEecCccH-HHHHHHHH
Confidence 011358888888753210 011111111 11111111 113566776655544 33334445
Q ss_pred cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHH
Q 001541 327 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1057)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~ 406 (1057)
..++|+|++.|+....... . .. ...++.+. .|+.+++.+|.|+++|+...+.+...++.
T Consensus 106 ~~~~~~v~~~h~~~~~~~~----~---~~----~~~~~~~~--~~~~~~~~ad~ii~~s~~~~~~~~~~~~~-------- 164 (363)
T cd04955 106 LKGKKVVVNMDGLEWKRAK----W---GR----PAKRYLKF--GEKLAVKFADRLIADSPGIKEYLKEKYGR-------- 164 (363)
T ss_pred hcCCCEEEEccCcceeecc----c---cc----chhHHHHH--HHHHHHhhccEEEeCCHHHHHHHHHhcCC--------
Confidence 5699999999987432210 0 00 01112222 35678899999999999877765443332
Q ss_pred HHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCC
Q 001541 407 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 486 (1057)
Q Consensus 407 l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~ 486 (1057)
+..+||||+|...+.+.. ...... ..++.+.|+++||+.+
T Consensus 165 -----------------~~~~i~ngv~~~~~~~~~----------------------~~~~~~-~~~~~~~i~~~G~~~~ 204 (363)
T cd04955 165 -----------------DSTYIPYGADHVVSSEED----------------------EILKKY-GLEPGRYYLLVGRIVP 204 (363)
T ss_pred -----------------CCeeeCCCcChhhcchhh----------------------hhHHhc-CCCCCcEEEEEecccc
Confidence 228999999987664300 001111 1234567899999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 487 KKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~-~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
.||++.+++|+.++.. ++. +++|+++.... +.+.+. .+++.++|.|+|+++.+++..+|+.|
T Consensus 205 ~Kg~~~li~a~~~l~~-----~~~l~ivG~~~~~~~-----------~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~a 268 (363)
T cd04955 205 ENNIDDLIEAFSKSNS-----GKKLVIVGNADHNTP-----------YGKLLKEKAAADPRIIFVGPIYDQELLELLRYA 268 (363)
T ss_pred cCCHHHHHHHHHhhcc-----CceEEEEcCCCCcch-----------HHHHHHHHhCCCCcEEEccccChHHHHHHHHhC
Confidence 9999999999998842 344 48888754222 222333 56778899999999999999999999
Q ss_pred hcCCcEEEEcCCC-CCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 565 AKTKGVFINPAFI-EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 565 a~~~dv~v~ps~~-Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
|++++||.. |+||++++||||||+|||+|+.|+..|++.+ +|+++++.|. ++++|.+++++++.+.+++.+
T Consensus 269 ----d~~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~~~--~g~~~~~~~~--l~~~i~~l~~~~~~~~~~~~~ 340 (363)
T cd04955 269 ----ALFYLHGHSVGGTNPSLLEAMAYGCPVLASDNPFNREVLGD--KAIYFKVGDD--LASLLEELEADPEEVSAMAKA 340 (363)
T ss_pred ----CEEEeCCccCCCCChHHHHHHHcCCCEEEecCCccceeecC--CeeEecCchH--HHHHHHHHHhCHHHHHHHHHH
Confidence 999999988 9999999999999999999999999999865 7999987776 999999999999999999999
Q ss_pred HHHHh-hcCCHHHHHHHHHHHHH
Q 001541 644 GLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 644 ~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+++.+ ++|||+.++++|+++|+
T Consensus 341 ~~~~~~~~fs~~~~~~~~~~~y~ 363 (363)
T cd04955 341 ARERIREKYTWEKIADQYEELYK 363 (363)
T ss_pred HHHHHHHhCCHHHHHHHHHHHhC
Confidence 99998 58999999999999874
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-33 Score=324.01 Aligned_cols=291 Identities=16% Similarity=0.104 Sum_probs=213.3
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEE-ecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFT-GHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t-~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+|||||+|...+...+.+.+...++|++++ .|+..+...... +...|...++- ..+...+| +++
T Consensus 279 ~rpDIVHt~~~~a~l~g~laA~lagvpviv~~~h~~~~~~~~r~----------~~~e~~~~~~a---~~i~~~sd-~v~ 344 (578)
T PRK15490 279 RKLDYLSVWQDGACLMIALAALIAGVPRIQLGLRGLPPVVRKRL----------FKPEYEPLYQA---LAVVPGVD-FMS 344 (578)
T ss_pred cCCCEEEEcCcccHHHHHHHHHhcCCCEEEEeecccCCcchhhH----------HHHHHHHhhhh---ceeEecch-hhh
Confidence 6799999998777677777777789999654 666322211000 00011101000 01133334 445
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
.+....+.+...+ |.+..++.|||||||...|.+..... ...+
T Consensus 345 ~s~~v~~~l~~~l----------------------gip~~KI~VIyNGVD~~rf~p~~~~~---------------~~~r 387 (578)
T PRK15490 345 NNHCVTRHYADWL----------------------KLEAKHFQVVYNGVLPPSTEPSSEVP---------------HKIW 387 (578)
T ss_pred ccHHHHHHHHHHh----------------------CCCHHHEEEEeCCcchhhcCccchhh---------------HHHH
Confidence 5554444432222 22334999999999999887632110 0011
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
.... ....++.++|+++||+.+.||...+|+|+.++... .+++.| |+|+|+. ..++.+++.++++
T Consensus 388 ~~~~-~~l~~~~~vIg~VgRl~~~Kg~~~LI~A~a~llk~--~pdirLvIVGdG~~-----------~eeLk~la~elgL 453 (578)
T PRK15490 388 QQFT-QKTQDADTTIGGVFRFVGDKNPFAWIDFAARYLQH--HPATRFVLVGDGDL-----------RAEAQKRAEQLGI 453 (578)
T ss_pred HHhh-hccCCCCcEEEEEEEEehhcCHHHHHHHHHHHHhH--CCCeEEEEEeCchh-----------HHHHHHHHHHcCC
Confidence 1111 11235668999999999999999999999988643 356664 8898764 4678889999999
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHH
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.++|.|+|+ .++++.+|+.| |+||+||.+||||++++||||||+|||+|+.||..|+|.++.+|++|++.|+++
T Consensus 454 ~d~V~FlG~--~~Dv~~~LaaA----DVfVlPS~~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~a 527 (578)
T PRK15490 454 LERILFVGA--SRDVGYWLQKM----NVFILFSRYEGLPNVLIEAQMVGVPVISTPAGGSAECFIEGVSGFILDDAQTVN 527 (578)
T ss_pred CCcEEECCC--hhhHHHHHHhC----CEEEEcccccCccHHHHHHHHhCCCEEEeCCCCcHHHcccCCcEEEECCCChhh
Confidence 999999998 57999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH---HHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHc
Q 001541 623 VADAL---LKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 623 la~aI---~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~ 666 (1057)
+++++ .++.........+++++++++ ++|||+.++++|.++|..
T Consensus 528 La~ai~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~~ 575 (578)
T PRK15490 528 LDQACRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIAS 575 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHh
Confidence 98887 444555555667899999999 699999999999999975
|
|
| >cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-32 Score=326.82 Aligned_cols=293 Identities=21% Similarity=0.270 Sum_probs=235.1
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHH-HHHHhhhcchHHHH-HHHHHHHHHHHHHHHhhcCCEE
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLE-QLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIV 381 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~-~l~~~g~~~~~~~~-~~yk~~~ri~~E~~~l~~ad~V 381 (1057)
.++||||+|.. .++.++.++++..++|+|+|.|+....... .+...... ...+. .+.++++. .++.+++.||.|
T Consensus 172 ~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~-~~~~~~~~~~~~~~--l~~~~~~~ad~I 248 (475)
T cd03813 172 PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWE-MSYFRRLWIRFFES--LGRLAYQAADRI 248 (475)
T ss_pred CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccc-hHHHHHHHHHHHHH--HHHHHHHhCCEE
Confidence 46899999975 567888888899999999999998653321 11111100 11111 12223333 367789999999
Q ss_pred EecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCc
Q 001541 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 461 (1057)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~ 461 (1057)
++.|+...+.+... +. +..++.|||||+|.+.|.+....
T Consensus 249 i~~s~~~~~~~~~~--g~---------------------~~~ki~vIpNgid~~~f~~~~~~------------------ 287 (475)
T cd03813 249 TTLYEGNRERQIED--GA---------------------DPEKIRVIPNGIDPERFAPARRA------------------ 287 (475)
T ss_pred EecCHHHHHHHHHc--CC---------------------CHHHeEEeCCCcCHHHcCCcccc------------------
Confidence 99998866554321 22 22389999999999988753210
Q ss_pred hHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 462 IWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
...++.++|+++||+.+.||++.+++|+..+.+. .+++.+ |+|+++.. ..+..++.++++++
T Consensus 288 --------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~--~p~~~l~IvG~g~~~-------~~~~~e~~~li~~l 350 (475)
T cd03813 288 --------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKK--IPDAEGWVIGPTDED-------PEYAEECRELVESL 350 (475)
T ss_pred --------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHh--CCCeEEEEECCCCcC-------hHHHHHHHHHHHHh
Confidence 0135678999999999999999999999998753 456665 78887531 34678899999999
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc------CCceEE
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV------LDNGLL 614 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~------~~~Gll 614 (1057)
++.++|.|+| .+++.++|+.| |++|+||..|+||++++||||||+|||+|+.||..|++.+ +.+|++
T Consensus 351 ~l~~~V~f~G---~~~v~~~l~~a----Dv~vlpS~~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~~~~~~g~~G~l 423 (475)
T cd03813 351 GLEDNVKFTG---FQNVKEYLPKL----DVLVLTSISEGQPLVILEAMAAGIPVVATDVGSCRELIEGADDEALGPAGEV 423 (475)
T ss_pred CCCCeEEEcC---CccHHHHHHhC----CEEEeCchhhcCChHHHHHHHcCCCEEECCCCChHHHhcCCcccccCCceEE
Confidence 9999999999 57999999999 9999999999999999999999999999999999999988 568999
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 615 VDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
++|.|+++++++|.+++++++.++++++++++.+ +.|+|+.++++|.++|+
T Consensus 424 v~~~d~~~la~ai~~ll~~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~lY~ 475 (475)
T cd03813 424 VPPADPEALARAILRLLKDPELRRAMGEAGRKRVERYYTLERMIDSYRRLYL 475 (475)
T ss_pred ECCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999 68999999999999884
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-33 Score=320.49 Aligned_cols=278 Identities=27% Similarity=0.378 Sum_probs=226.3
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+||+|....+..+..+++.+++|+|++.|+............ . .++..+. .+...++.+|.|+++
T Consensus 81 ~~~dvvh~~~~~~~~~~~~~~~~~~~p~i~~~h~~~~~~~~~~~~~---~------~~~~~~~--~~~~~~~~~d~ii~~ 149 (367)
T cd05844 81 HRPDLVHAHFGFDGVYALPLARRLGVPLVVTFHGFDATTSLALLLR---S------RWALYAR--RRRRLARRAALFIAV 149 (367)
T ss_pred hCCCEEEeccCchHHHHHHHHHHcCCCEEEEEeCccccccchhhcc---c------chhHHHH--HHHHHHHhcCEEEEC
Confidence 5799999998777788888888899999999997543221110000 0 0111222 245678999999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+... +. +.+++.++|||+|.+.|.+...
T Consensus 150 s~~~~~~~~~~--~~---------------------~~~~i~vi~~g~d~~~~~~~~~---------------------- 184 (367)
T cd05844 150 SQFIRDRLLAL--GF---------------------PPEKVHVHPIGVDTAKFTPATP---------------------- 184 (367)
T ss_pred CHHHHHHHHHc--CC---------------------CHHHeEEecCCCCHHhcCCCCC----------------------
Confidence 99877665432 22 2238999999999988764311
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
..+.+.|+++|++.+.||++.+++|+..+.+. .+++.| ++|+++. .+++.++++.+++.
T Consensus 185 -------~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~ivG~g~~-----------~~~~~~~~~~~~~~ 244 (367)
T cd05844 185 -------ARRPPRILFVGRFVEKKGPLLLLEAFARLARR--VPEVRLVIIGDGPL-----------LAALEALARALGLG 244 (367)
T ss_pred -------CCCCcEEEEEEeeccccChHHHHHHHHHHHHh--CCCeEEEEEeCchH-----------HHHHHHHHHHcCCC
Confidence 23467899999999999999999999998643 345564 7787653 46688888998998
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC------CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF------IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP 617 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~------~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p 617 (1057)
++|.|.|.++.+++..+|+.| |++|+||. .|+||++++||||||+|||+++.||..|++.++.+|+++++
T Consensus 245 ~~v~~~g~~~~~~l~~~~~~a----d~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 245 GRVTFLGAQPHAEVRELMRRA----RIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred CeEEECCCCCHHHHHHHHHhC----CEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecCCeeEEECC
Confidence 999999999999999999999 99999996 59999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 001541 618 HDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 662 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~ 662 (1057)
.|+++++++|.+++++++++++++.++++.+ ++|||+.+++++.+
T Consensus 321 ~d~~~l~~~i~~l~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~~ 366 (367)
T cd05844 321 GDVAALAAALGRLLADPDLRARMGAAGRRRVEERFDLRRQTAKLEA 366 (367)
T ss_pred CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHCCHHHHHHHHhc
Confidence 9999999999999999999999999999999 69999999998875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-33 Score=326.83 Aligned_cols=284 Identities=18% Similarity=0.215 Sum_probs=209.8
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+|||||+|++.+..+ ..+.+..++|+|++.|+...... ...+++. +..+..+|.+++.
T Consensus 84 ~~~Dvv~~h~~~~~~~-~~~~~~~~~~~i~~~H~~~~~~~--------------~~~~~~~------~~~~~~~d~~i~~ 142 (372)
T cd03792 84 LDADVVVIHDPQPLAL-PLFKKKRGRPWIWRCHIDLSSPN--------------RRVWDFL------QPYIEDYDAAVFH 142 (372)
T ss_pred CCCCEEEECCCCchhH-HHhhhcCCCeEEEEeeeecCCCc--------------HHHHHHH------HHHHHhCCEEeec
Confidence 5799999998764332 22333448999999998643211 0111222 2346789999888
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch-H
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI-W 463 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~-~ 463 (1057)
|...... . + ...++ +||||+|........ ..+.. .
T Consensus 143 ~~~~~~~------~----------------~-----~~~~~-vipngvd~~~~~~~~----------------~~~~~~~ 178 (372)
T cd03792 143 LPEYVPP------Q----------------V-----PPRKV-IIPPSIDPLSGKNRE----------------LSPADIE 178 (372)
T ss_pred HHHhcCC------C----------------C-----CCceE-EeCCCCCCCccccCC----------------CCHHHHH
Confidence 8432110 1 1 11144 999999975321100 01111 1
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
..+.++...+++++|+++||+++.||++.+++|+..+.+.. +++. +++|+++..+.. ....+.++.+..++
T Consensus 179 ~~~~~~~~~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~--~~~~l~i~G~g~~~~~~------~~~~~~~~~~~~~~ 250 (372)
T cd03792 179 YILEKYGIDPERPYITQVSRFDPWKDPFGVIDAYRKVKERV--PDPQLVLVGSGATDDPE------GWIVYEEVLEYAEG 250 (372)
T ss_pred HHHHHhCCCCCCcEEEEEeccccccCcHHHHHHHHHHHhhC--CCCEEEEEeCCCCCCch------hHHHHHHHHHHhCC
Confidence 23344555678899999999999999999999999986533 3444 478887653211 12223444445677
Q ss_pred CCCEEeCCCC--CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH
Q 001541 543 YGQVAYPKHH--KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1057)
Q Consensus 543 ~~~V~f~g~v--~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1057)
.++|.|.|.. +.+++..+|+.| |+|++||..||||++++||||||+|||+|+.||..+++.++.+|++++ +.
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~a----d~~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~i~~~~~g~~~~--~~ 324 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRAS----TVVLQKSIREGFGLTVTEALWKGKPVIAGPVGGIPLQIEDGETGFLVD--TV 324 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhC----eEEEeCCCccCCCHHHHHHHHcCCCEEEcCCCCchhhcccCCceEEeC--Cc
Confidence 7889998876 788999999999 999999999999999999999999999999999999999999999997 56
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++.+|.+++++++++++|++++++.+ ++|||+..+++|+++|+.+
T Consensus 325 ~~~a~~i~~ll~~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~~ 372 (372)
T cd03792 325 EEAAVRILYLLRDPELRRKMGANAREHVRENFLITRHLKDYLYLISKL 372 (372)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHhC
Confidence 7899999999999999999999999998 6999999999999999853
|
The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases. |
| >cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-32 Score=311.78 Aligned_cols=342 Identities=25% Similarity=0.314 Sum_probs=257.4
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
..||+++++.+|+++|.++| |+|.+++.... .. . ..+..++.++.++.....
T Consensus 8 ~~gG~e~~~~~l~~~L~~~g--~~v~v~~~~~~--~~-----~----------------~~~~~~~~~~~~~~~~~~--- 59 (355)
T cd03819 8 ESGGVERGTLELARALVERG--HRSLVASAGGR--LV-----A----------------ELEAEGSRHIKLPFISKN--- 59 (355)
T ss_pred ccCcHHHHHHHHHHHHHHcC--CEEEEEcCCCc--hH-----H----------------HHHhcCCeEEEccccccc---
Confidence 35999999999999999999 99999976421 00 0 011236677776653321
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
.+..+ ..+..+.+.+.+ .+||+||+|+......+.++++..++|+|++.|+......
T Consensus 60 ----~~~~~--------~~~~~l~~~~~~-------~~~dii~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~---- 116 (355)
T cd03819 60 ----PLRIL--------LNVARLRRLIRE-------EKVDIVHARSRAPAWSAYLAARRTRPPFVTTVHGFYSVNF---- 116 (355)
T ss_pred ----hhhhH--------HHHHHHHHHHHH-------cCCCEEEECCCchhHHHHHHHHhcCCCEEEEeCCchhhHH----
Confidence 11111 111122222332 5799999999877777777778889999999998754221
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
+ ....+..+|.++++|+...+.+...+ |.+..++.+|
T Consensus 117 ---------------~------~~~~~~~~~~vi~~s~~~~~~~~~~~----------------------~~~~~k~~~i 153 (355)
T cd03819 117 ---------------R------YNAIMARGDRVIAVSNFIADHIRENY----------------------GVDPDRIRVI 153 (355)
T ss_pred ---------------H------HHHHHHhcCEEEEeCHHHHHHHHHhc----------------------CCChhhEEEe
Confidence 0 12346789999999988766654322 2233489999
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH-HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS-EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 507 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~ 507 (1057)
|||+|...|.+.... ..... .+.++...++.++|+++||+.+.||++.+++|+..+.+. .+
T Consensus 154 ~ngi~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~--~~ 215 (355)
T cd03819 154 PRGVDLDRFDPGAVP----------------PERILALAREWPLPKGKPVILLPGRLTRWKGQEVFIEALARLKKD--DP 215 (355)
T ss_pred cCCccccccCccccc----------------hHHHHHHHHHcCCCCCceEEEEeeccccccCHHHHHHHHHHHHhc--CC
Confidence 999999887643211 11111 233334456778999999999999999999999999653 34
Q ss_pred cEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcC-CCCCCCHHHH
Q 001541 508 NLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLI 585 (1057)
Q Consensus 508 ~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~~l 585 (1057)
++.+ |+|+++..+ .+...+.+.+.++++.++|.|+|+ .+++..+|+.| |++|+|| ..|+||++++
T Consensus 216 ~~~l~ivG~~~~~~-------~~~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~l~~a----d~~i~ps~~~e~~~~~l~ 282 (355)
T cd03819 216 DVHLLIVGDAQGRR-------FYYAELLELIKRLGLQDRVTFVGH--CSDMPAAYALA----DIVVSASTEPEAFGRTAV 282 (355)
T ss_pred CeEEEEEECCcccc-------hHHHHHHHHHHHcCCcceEEEcCC--cccHHHHHHhC----CEEEecCCCCCCCchHHH
Confidence 5665 778876532 235566778888899889999999 78999999999 9999999 8999999999
Q ss_pred HHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHH
Q 001541 586 EAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPE 655 (1057)
Q Consensus 586 EAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~ 655 (1057)
||||||+|||+++.||..|++.++.+|+++++.|+++++++|..++. +++++.++++++++.+ ++|||+.
T Consensus 283 EA~a~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~a~~~~~~~f~~~~ 354 (355)
T cd03819 283 EAQAMGRPVIASDHGGARETVRPGETGLLVPPGDAEALAQALDQILSLLPEGRAKMFAKARMCVETLFSYDR 354 (355)
T ss_pred HHHhcCCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999889999999999999999976655 8999999999999999 6999975
|
WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core. |
| >cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.2e-32 Score=308.90 Aligned_cols=362 Identities=23% Similarity=0.263 Sum_probs=261.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... |..||.+.++..|+++|.+.| |+|++++......... +
T Consensus 1 kIl~i~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~--~----------------- 48 (364)
T cd03814 1 RIAIVTDTFL-----------PQVNGVVRTLQRLVEHLRARG--HEVLVIAPGPFRESEG--P----------------- 48 (364)
T ss_pred CeEEEecccC-----------ccccceehHHHHHHHHHHHCC--CEEEEEeCCchhhccC--C-----------------
Confidence 6899985443 567999999999999999999 9999998764211100 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-CchHHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLS 325 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~-~~~~~a~~l~ 325 (1057)
.....+...+.... ....+... ....+ .+.+. ..+||+||+|.. ..+..+..++
T Consensus 49 ----~~~~~~~~~~~~~~----~~~~~~~~---~~~~~-------~~~~~-------~~~pdii~~~~~~~~~~~~~~~~ 103 (364)
T cd03814 49 ----ARVVPVPSVPLPGY----PEIRLALP---PRRRV-------RRLLD-------AFAPDVVHIATPGPLGLAALRAA 103 (364)
T ss_pred ----CCceeecccccCcc----cceEeccc---chhhH-------HHHHH-------hcCCCEEEEeccchhhHHHHHHH
Confidence 01222222221111 00000000 00011 11111 157999999875 3455666777
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|++++.|+.+........ .. ...++... .++..++.+|.+++.|+...+.+...+
T Consensus 104 ~~~~~~~i~~~~~~~~~~~~~~~-----~~----~~~~~~~~--~~~~~~~~~d~i~~~s~~~~~~~~~~~--------- 163 (364)
T cd03814 104 RRLGIPVVTSYHTDFPEYLRYYG-----LG----PLSWLAWA--YLRWFHNRADRVLVPSPSLADELRARG--------- 163 (364)
T ss_pred HHcCCCEEEEEecChHHHhhhcc-----cc----hHhHhhHH--HHHHHHHhCCEEEeCCHHHHHHHhccC---------
Confidence 78899999999987653322110 00 01111112 245678899999999998766432221
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
..++.++|+|+|...|.+..... .....+. .++++.|+++||+.
T Consensus 164 ----------------~~~~~~~~~g~~~~~~~~~~~~~-------------------~~~~~~~-~~~~~~i~~~G~~~ 207 (364)
T cd03814 164 ----------------FRRVRLWPRGVDTELFHPRRRDE-------------------ALRARLG-PPDRPVLLYVGRLA 207 (364)
T ss_pred ----------------CCceeecCCCccccccCcccccH-------------------HHHHHhC-CCCCeEEEEEeccc
Confidence 12789999999998886532110 1111222 45678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
+.||++.+++++..+.+. +++.+ ++|++++.. .+. +...+|.|.|+++.+++..+|+.|
T Consensus 208 ~~k~~~~~i~~~~~l~~~---~~~~l~i~G~~~~~~-----------~~~------~~~~~v~~~g~~~~~~~~~~~~~~ 267 (364)
T cd03814 208 PEKNLEALLDADLPLRRR---PPVRLVIVGDGPARA-----------RLE------ARYPNVHFLGFLDGEELAAAYASA 267 (364)
T ss_pred cccCHHHHHHHHHHhhhc---CCceEEEEeCCchHH-----------HHh------ccCCcEEEEeccCHHHHHHHHHhC
Confidence 999999999999999753 45554 788776421 111 456789999999999999999999
Q ss_pred hcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001541 565 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 644 (1057)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1057)
|++|+|+..|+||++++||||||+|||+++.|+..+++.++.+|+++++.|.++++++|.+++.+++.+.++++++
T Consensus 268 ----d~~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~ 343 (364)
T cd03814 268 ----DVFVFPSRTETFGLVVLEAMASGLPVVAPDAGGPADIVTDGENGLLVEPGDAEAFAAALAALLADPELRRRMAARA 343 (364)
T ss_pred ----CEEEECcccccCCcHHHHHHHcCCCEEEcCCCCchhhhcCCcceEEcCCCCHHHHHHHHHHHHcCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999899999999999999999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHH
Q 001541 645 LKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 645 ~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
++.+++|+|+.++++++++|+
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~ 364 (364)
T cd03814 344 RAEAERRSWEAFLDNLLEAYR 364 (364)
T ss_pred HHHHhhcCHHHHHHHHHHhhC
Confidence 999989999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=9e-32 Score=308.27 Aligned_cols=352 Identities=20% Similarity=0.234 Sum_probs=257.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... |+.||.++++.+|+++|.+.| |+|+|++........ .
T Consensus 1 kil~i~~~~~-----------p~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~-------~------------- 47 (357)
T cd03795 1 RVLHVGKFYP-----------PDRGGIEQVIRDLAEGLAARG--IEVAVLCASPEPKGR-------D------------- 47 (357)
T ss_pred CeeEecCCCC-----------CCCCcHHHHHHHHHHHHHhCC--CceEEEecCCCCcch-------h-------------
Confidence 5888885443 679999999999999999999 999999875421110 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
....+..+++++.... ....+... .++..+. + ...+||+||+|+............
T Consensus 48 --~~~~~~~~~~~~~~~~------~~~~~~~~----~~~~~~~-----~-------~~~~~Dii~~~~~~~~~~~~~~~~ 103 (357)
T cd03795 48 --EERNGHRVIRAPSLLN------VASTPFSP----SFFKQLK-----K-------LAKKADVIHLHFPNPLADLALLLL 103 (357)
T ss_pred --hhccCceEEEeecccc------cccccccH----HHHHHHH-----h-------cCCCCCEEEEecCcchHHHHHHHh
Confidence 0113445666553211 00111111 1111111 0 125799999998654333333333
Q ss_pred cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHH
Q 001541 327 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1057)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~ 406 (1057)
..++|++++.|+...... ..+++... .++..++.||.|+++|+...+.....+..
T Consensus 104 ~~~~~~i~~~h~~~~~~~---------------~~~~~~~~--~~~~~~~~~d~vi~~s~~~~~~~~~~~~~-------- 158 (357)
T cd03795 104 PRKKPVVVHWHSDIVKQK---------------LLLKLYRP--LQRRFLRRADAIVATSPNYAETSPVLRRF-------- 158 (357)
T ss_pred ccCceEEEEEcChhhccc---------------hhhhhhhH--HHHHHHHhcCEEEeCcHHHHHHHHHhcCC--------
Confidence 368999999997432110 01112222 24567999999999999876654332211
Q ss_pred HHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCC
Q 001541 407 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 486 (1057)
Q Consensus 407 l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~ 486 (1057)
..++.+||||+|...+.+..... ........+.++|+++||+.+
T Consensus 159 ---------------~~~~~~i~~gi~~~~~~~~~~~~---------------------~~~~~~~~~~~~i~~~G~~~~ 202 (357)
T cd03795 159 ---------------RDKVRVIPLGLDPARYPRPDALE---------------------EAIWRRAAGRPFFLFVGRLVY 202 (357)
T ss_pred ---------------ccceEEecCCCChhhcCCcchhh---------------------hHhhcCCCCCcEEEEeccccc
Confidence 12899999999998776432100 011222456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 487 KKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
.||++.+++|+.++. ++. +|+|+++. ...+.+++.++++..+|.|+|+++.+++..+|+.|
T Consensus 203 ~K~~~~li~a~~~l~------~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a- 264 (357)
T cd03795 203 YKGLDVLLEAAAALP------DAPLVIVGEGPL-----------EAELEALAAALGLLDRVRFLGRLDDEEKAALLAAC- 264 (357)
T ss_pred ccCHHHHHHHHHhcc------CcEEEEEeCChh-----------HHHHHHHHHhcCCcceEEEcCCCCHHHHHHHHHhC-
Confidence 999999999999984 444 47787764 35567777888999999999999999999999999
Q ss_pred cCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc-CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001541 566 KTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV-LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ 642 (1057)
Q Consensus 566 ~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~-~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1057)
|++++||. .|+||++++|||+||+|||+|+.|+..+.+.. +.+|++++++|+++++++|.+++++++.++++++
T Consensus 265 ---d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~~l~~~~~~~~~~~~ 341 (357)
T cd03795 265 ---DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIRRLLEDPELRERLGE 341 (357)
T ss_pred ---CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHHHHHHCHHHHHHHHH
Confidence 99999985 69999999999999999999999999998886 8999999999999999999999999999999999
Q ss_pred HHHHHh-hcCCHHHHH
Q 001541 643 NGLKNI-HLFSWPEHC 657 (1057)
Q Consensus 643 ~~~~~v-~~fsw~~~a 657 (1057)
++++.+ ++|||+.++
T Consensus 342 ~~~~~~~~~~s~~~~~ 357 (357)
T cd03795 342 AARERAEEEFTADRMV 357 (357)
T ss_pred HHHHHHHHhcchHhhC
Confidence 999999 699998763
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog |
| >cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.6e-32 Score=317.22 Aligned_cols=378 Identities=14% Similarity=0.100 Sum_probs=248.9
Q ss_pred CcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccccc
Q 001541 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAK 270 (1057)
Q Consensus 191 GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k 270 (1057)
+|...++.++|++|++.| |+|+|++.....+. . +.....|+.++.++..+....
T Consensus 14 ~~~~~R~~~~a~~L~~~G--~~V~ii~~~~~~~~--------~-------------~~~~~~~v~~~~~~~~~~~~~--- 67 (415)
T cd03816 14 IGRSPRMQYHALSLAKHG--WKVDLVGYLETPPH--------D-------------EILSNPNITIHPLPPPPQRLN--- 67 (415)
T ss_pred cCCCHHHHHHHHHHHhcC--ceEEEEEecCCCCC--------H-------------HHhcCCCEEEEECCCCccccc---
Confidence 466677789999999999 99999987531111 0 011235889988876441000
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc---hHHHHHHHhcCCCCEEEEecCCchhhHHHH
Q 001541 271 ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA---GDSAALLSGALNVPMLFTGHSLGRDKLEQL 347 (1057)
Q Consensus 271 ~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~---~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1057)
..+++..+...++..+..+.+.+.. ..+||+||+|.... ..++.++++..++|+|+|.|+.+....
T Consensus 68 --~~~~~~~~~~~~~~~~~~~~~~l~~------~~~~Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~--- 136 (415)
T cd03816 68 --KLPFLLFAPLKVLWQFFSLLWLLYK------LRPADYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTIL--- 136 (415)
T ss_pred --cchHHHHHHHHHHHHHHHHHHHHHh------cCCCCEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHH---
Confidence 0111111111222112222111111 14699999987432 334555677789999999998753211
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
..+... .....++.+++ |++.++.||.||++|+...+.+.. + |.+..++.|
T Consensus 137 -~~~~~~---~~~~~~~~~~~--e~~~~~~ad~ii~vS~~~~~~l~~-~----------------------~~~~~ki~v 187 (415)
T cd03816 137 -ALKLGE---NHPLVRLAKWY--EKLFGRLADYNLCVTKAMKEDLQQ-F----------------------NNWKIRATV 187 (415)
T ss_pred -hcccCC---CCHHHHHHHHH--HHHHhhcCCEeeecCHHHHHHHHh-h----------------------hccCCCeee
Confidence 111100 11122344443 778899999999999987776543 2 223348999
Q ss_pred eCCCCCCCCcCCCCCCCCCC-CCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--
Q 001541 428 IPPGMEFHHIVPQDGDMDGE-TEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLR-- 504 (1057)
Q Consensus 428 IpnGiD~~~f~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~-- 504 (1057)
||||. ...|.|........ ....... ..+............++..+++++||+.+.||++.+++|+..+....
T Consensus 188 I~Ng~-~~~f~p~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~ 263 (415)
T cd03816 188 LYDRP-PEQFRPLPLEEKHELFLKLAKT---FLTRELRIGAVQLSEERPALLVSSTSWTPDEDFGILLDALVAYEKSAAT 263 (415)
T ss_pred cCCCC-HHHceeCcHHHHHHHHHhcccc---ccccccccccceecCCCceEEEEeccccCCCCHHHHHHHHHHHHHhhcc
Confidence 99994 45565432110000 0000000 00000000000011234567889999999999999999999986421
Q ss_pred --CCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcC---CCC
Q 001541 505 --ELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA---FIE 578 (1057)
Q Consensus 505 --~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps---~~E 578 (1057)
..+++.+ |+|+|+. ...+.++++++++.+.+.|.|+++.++++.+|+.| |++|.|+ ..|
T Consensus 264 ~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~~~~~~g~~~~~~~~~~l~~a----Dv~v~~~~~~~~~ 328 (415)
T cd03816 264 GPKLPKLLCIITGKGPL-----------KEKYLERIKELKLKKVTIRTPWLSAEDYPKLLASA----DLGVSLHTSSSGL 328 (415)
T ss_pred cccCCCEEEEEEecCcc-----------HHHHHHHHHHcCCCcEEEEcCcCCHHHHHHHHHhC----CEEEEcccccccc
Confidence 2356775 7898875 56788889999997767777899999999999999 9999753 357
Q ss_pred CCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhC---HHHHHHHHHHHHHHhhcCCHHH
Q 001541 579 PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVAD---KQLWARCRQNGLKNIHLFSWPE 655 (1057)
Q Consensus 579 gfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d---~~~~~~~~~~~~~~v~~fsw~~ 655 (1057)
+||++++||||||+|||+|+.||..|+++++.+|++++ |+++++++|.++++| ++++++|++++++.. .++|..
T Consensus 329 ~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~-~~~~~~ 405 (415)
T cd03816 329 DLPMKVVDMFGCGLPVCALDFKCIDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES-ELRWDE 405 (415)
T ss_pred CCcHHHHHHHHcCCCEEEeCCCCHHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh-hcCHHH
Confidence 89999999999999999999999999999999999995 999999999999999 999999999999887 555554
Q ss_pred H
Q 001541 656 H 656 (1057)
Q Consensus 656 ~ 656 (1057)
-
T Consensus 406 ~ 406 (415)
T cd03816 406 N 406 (415)
T ss_pred H
Confidence 3
|
The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik. |
| >cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.7e-32 Score=306.52 Aligned_cols=331 Identities=18% Similarity=0.186 Sum_probs=236.3
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++|+.... + .+ +|..||+++++.+|+++|.+.| |+|++++........
T Consensus 1 MkI~~i~~~~~----~--~~-~~~~GG~~~~~~~l~~~L~~~g--~~V~v~~~~~~~~~~-------------------- 51 (335)
T cd03802 1 MRIALVAPPRE----P--VP-PPAYGGTERVVAALTEGLVARG--HEVTLFASGDSKTAA-------------------- 51 (335)
T ss_pred CeEEEEcCCcc----c--CC-CcccCcHHHHHHHHHHHHHhcC--ceEEEEecCCCCccc--------------------
Confidence 89999986443 0 01 2578999999999999999999 999999875421100
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
..+....... .... . ............+.+.+.+ .+|||||+|.+..... ++
T Consensus 52 ---------~~~~~~~~~~--~~~~---~----~~~~~~~~~~~~~~~~~~~-------~~~Divh~~~~~~~~~---~~ 103 (335)
T cd03802 52 ---------PLVPVVPEPL--RLDA---P----GRDRAEAEALALAERALAA-------GDFDIVHNHSLHLPLP---FA 103 (335)
T ss_pred ---------ceeeccCCCc--cccc---c----hhhHhhHHHHHHHHHHHhc-------CCCCEEEecCcccchh---hh
Confidence 0000000000 0000 0 0000111111222222222 5699999998765544 56
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|+|.|+........ ........+.++++|+...+.....
T Consensus 104 ~~~~~~~v~~~h~~~~~~~~~------------------------~~~~~~~~~~~~~~s~~~~~~~~~~---------- 149 (335)
T cd03802 104 RPLPVPVVTTLHGPPDPELLK------------------------LYYAARPDVPFVSISDAQRRPWPPL---------- 149 (335)
T ss_pred cccCCCEEEEecCCCCcccch------------------------HHHhhCcCCeEEEecHHHHhhcccc----------
Confidence 678999999999886533110 0124567788999988765542111
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.++.+||||+|.+.|.+. ...++.|+++||+.
T Consensus 150 -----------------~~~~vi~ngvd~~~~~~~-------------------------------~~~~~~i~~~Gr~~ 181 (335)
T cd03802 150 -----------------PWVATVHNGIDLDDYPFR-------------------------------GPKGDYLLFLGRIS 181 (335)
T ss_pred -----------------cccEEecCCcChhhCCCC-------------------------------CCCCCEEEEEEeec
Confidence 278999999999888641 13467899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcC-CCCCEEeCCCCCCCcHHHHHHH
Q 001541 486 PKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYD-LYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~-l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
+.||++.+++|+.+. ++. +++|.++.. ..+........ +.++|.|+|+++.+++..+|+.
T Consensus 182 ~~Kg~~~li~~~~~~-------~~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 182 PEKGPHLAIRAARRA-------GIPLKLAGPVSDP-----------DYFYREIAPELLDGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred cccCHHHHHHHHHhc-------CCeEEEEeCCCCH-----------HHHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHh
Confidence 999999999998754 233 478887642 22233333332 5678999999999999999999
Q ss_pred hhcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHH
Q 001541 564 AAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQ 642 (1057)
Q Consensus 564 Aa~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~ 642 (1057)
| |++|+||. .|+||++++||||||+|||+++.||..|++.++.+|+++++ +++++++|.+++..+ .+
T Consensus 244 ~----d~~v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l~~l~~~~------~~ 311 (335)
T cd03802 244 A----RALLFPILWEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAVARADRLD------RA 311 (335)
T ss_pred C----cEEEeCCcccCCcchHHHHHHhcCCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHHHHHhccH------HH
Confidence 9 99999996 59999999999999999999999999999999889999985 999999999987643 24
Q ss_pred HHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 643 NGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 643 ~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
++++.+ ++|||+..+++|+++|+
T Consensus 312 ~~~~~~~~~~s~~~~~~~~~~~y~ 335 (335)
T cd03802 312 ACRRRAERRFSAARMVDDYLALYR 335 (335)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHhC
Confidence 556666 79999999999999884
|
aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue. |
| >KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-33 Score=299.27 Aligned_cols=366 Identities=18% Similarity=0.234 Sum_probs=267.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
++|++||.+.+ |.+||.+.+++.|++.|-++| |.|.++|..+.+- .+..++
T Consensus 1 ~~i~mVsdff~-----------P~~ggveshiy~lSq~li~lg--hkVvvithayg~r-------~giryl--------- 51 (426)
T KOG1111|consen 1 SRILMVSDFFY-----------PSTGGVESHIYALSQCLIRLG--HKVVVITHAYGNR-------VGIRYL--------- 51 (426)
T ss_pred CcceeeCcccc-----------cCCCChhhhHHHhhcchhhcC--CeEEEEeccccCc-------cceeee---------
Confidence 47999999998 899999999999999999999 9999999876321 233333
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHH--HHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS--AAL 323 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~--a~~ 323 (1057)
++|..++.+|+.. ..++..+|-+.....-+...+.+ .+..|||+|.+++... +.+
T Consensus 52 -----t~glkVyylp~~v----~~n~tT~ptv~~~~Pllr~i~lr--------------E~I~ivhghs~fS~lahe~l~ 108 (426)
T KOG1111|consen 52 -----TNGLKVYYLPAVV----GYNQTTFPTVFSDFPLLRPILLR--------------ERIEIVHGHSPFSYLAHEALM 108 (426)
T ss_pred -----cCCceEEEEeeee----eecccchhhhhccCcccchhhhh--------------hceEEEecCChHHHHHHHHHH
Confidence 2467788777632 22233333322221111111111 4689999999754433 566
Q ss_pred HHhcCCCCEEEEecCCchhh-HHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChH
Q 001541 324 LSGALNVPMLFTGHSLGRDK-LEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 402 (1057)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~-~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~ 402 (1057)
.++.+|.++|+|-|+++-.. .... ..+. .-..++...|.+||+|..-.+- --+.....|
T Consensus 109 hartMGlktVfTdHSlfGfad~~si---------~~n~---------ll~~sL~~id~~IcVshtsken-tvlr~~L~p- 168 (426)
T KOG1111|consen 109 HARTMGLKTVFTDHSLFGFADIGSI---------LTNK---------LLPLSLANIDRIICVSHTSKEN-TVLRGALAP- 168 (426)
T ss_pred HHHhcCceEEEeccccccccchhhh---------hhcc---------eeeeeecCCCcEEEEeecCCCc-eEEEeccCH-
Confidence 78889999999999974321 1111 1111 1235788999999987643221 112222333
Q ss_pred HHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEe
Q 001541 403 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALA 482 (1057)
Q Consensus 403 ~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vG 482 (1057)
.+|.+|||.++.+.|.|.+... ...+...|+.++
T Consensus 169 --------------------~kvsvIPnAv~~~~f~P~~~~~--------------------------~S~~i~~ivv~s 202 (426)
T KOG1111|consen 169 --------------------AKVSVIPNAVVTHTFTPDAADK--------------------------PSADIITIVVAS 202 (426)
T ss_pred --------------------hHeeeccceeeccccccCcccc--------------------------CCCCeeEEEEEe
Confidence 3999999999999999854321 023347899999
Q ss_pred CCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHH
Q 001541 483 RPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIY 561 (1057)
Q Consensus 483 Rl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly 561 (1057)
||.++||++.|++++.++..+ .|++.+ |+|+||.. ..+++..+++.++.+|.++|.++.+++.+.|
T Consensus 203 RLvyrKGiDll~~iIp~vc~~--~p~vrfii~GDGPk~-----------i~lee~lEk~~l~~rV~~lG~v~h~~Vr~vl 269 (426)
T KOG1111|consen 203 RLVYRKGIDLLLEIIPSVCDK--HPEVRFIIIGDGPKR-----------IDLEEMLEKLFLQDRVVMLGTVPHDRVRDVL 269 (426)
T ss_pred eeeeccchHHHHHHHHHHHhc--CCCeeEEEecCCccc-----------chHHHHHHHhhccCceEEecccchHHHHHHH
Confidence 999999999999999999754 556664 78999873 4466778889999999999999999999999
Q ss_pred HHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHH
Q 001541 562 RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCR 641 (1057)
Q Consensus 562 ~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~ 641 (1057)
..- |+|++||+.|.|+++++|||+||+|||+|..||.+|++.+. -+...+.+++++++++++++..-..- -
T Consensus 270 ~~G----~IFlntSlTEafc~~ivEAaScGL~VVsTrVGGIpeVLP~d--~i~~~~~~~~dl~~~v~~ai~~~~~~---p 340 (426)
T KOG1111|consen 270 VRG----DIFLNTSLTEAFCMVIVEAASCGLPVVSTRVGGIPEVLPED--MITLGEPGPDDLVGAVEKAITKLRTL---P 340 (426)
T ss_pred hcC----cEEeccHHHHHHHHHHHHHHhCCCEEEEeecCCccccCCcc--ceeccCCChHHHHHHHHHHHHHhccC---c
Confidence 999 99999999999999999999999999999999999998643 34455568999999999988732111 1
Q ss_pred HHHHHHh-hcCCHHHHHHHHHHHHHcccCCC
Q 001541 642 QNGLKNI-HLFSWPEHCKTYLSRIAGCKPRH 671 (1057)
Q Consensus 642 ~~~~~~v-~~fsw~~~a~~~l~~~~~~~~~~ 671 (1057)
....+.+ +.|+|...+++..+.|.++....
T Consensus 341 ~~~h~~v~~~y~w~dVa~rTekvy~r~~~t~ 371 (426)
T KOG1111|consen 341 LEFHDRVKKMYSWKDVAERTEKVYDRAATTS 371 (426)
T ss_pred hhHHHHHHHhccHHHHHHHHHHHHHHHhhcc
Confidence 2233455 58999999999999999887654
|
|
| >cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-31 Score=304.52 Aligned_cols=385 Identities=21% Similarity=0.270 Sum_probs=272.8
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.+.. |..||.+.++..++++|++.| |+|++++.....+....... .
T Consensus 1 kIl~i~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~~~~~~~---------------~ 52 (394)
T cd03794 1 KILILSQYFP-----------PELGGGAFRTTELAEELVKRG--HEVTVITGSPNYPSGKIYKG---------------Y 52 (394)
T ss_pred CEEEEecccC-----------CccCCcceeHHHHHHHHHhCC--ceEEEEecCCCccccccccc---------------c
Confidence 6899985443 556999999999999999999 99999987643221110000 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC--CchHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA--DAGDSAALL 324 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~--~~~~~a~~l 324 (1057)
......++.+++++..... ... .+..+. ..+.+.....+.+.. +..+||+||+|.+ .....+..+
T Consensus 53 ~~~~~~~~~~~~~~~~~~~----~~~---~~~~~~-~~~~~~~~~~~~~~~-----~~~~~D~v~~~~~~~~~~~~~~~~ 119 (394)
T cd03794 53 KREEVDGVRVHRVPLPPYK----KNG---LLKRLL-NYLSFALSALLALLK-----RRRRPDVIIATSPPLLIALAALLL 119 (394)
T ss_pred eEEecCCeEEEEEecCCCC----ccc---hHHHHH-hhhHHHHHHHHHHHh-----cccCCCEEEEcCChHHHHHHHHHH
Confidence 0012357888887764431 000 001110 111111111111110 1257999999973 345556666
Q ss_pred HhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHH
Q 001541 325 SGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLE 404 (1057)
Q Consensus 325 ~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~ 404 (1057)
++..++|+|++.|++++...... +..... ...+++.+++ |+..++.+|.|+++|+...+.+. .
T Consensus 120 ~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~--~~~~~~~~~~--~~~~~~~~d~vi~~s~~~~~~~~-~--------- 182 (394)
T cd03794 120 ARLKGAPFVLEVRDLWPESAVAL---GLLKNG--SLLYRLLRKL--ERLIYRRADAIVVISPGMREYLV-R--------- 182 (394)
T ss_pred HHhcCCCEEEEehhhcchhHHHc---cCcccc--chHHHHHHHH--HHHHHhcCCEEEEECHHHHHHHH-h---------
Confidence 77779999999999876543221 111111 0112333333 67789999999999998777653 1
Q ss_pred HHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCC
Q 001541 405 RKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARP 484 (1057)
Q Consensus 405 ~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl 484 (1057)
.+.+..++.++|||++...+.+..... ...+.....+++.|+++|++
T Consensus 183 -------------~~~~~~~~~~i~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 183 -------------RGVPPEKISVIPNGVDLELFKPPPADE--------------------SLRKELGLDDKFVVLYAGNI 229 (394)
T ss_pred -------------cCCCcCceEEcCCCCCHHHcCCccchh--------------------hhhhccCCCCcEEEEEecCc
Confidence 112234899999999988776432110 01222334667899999999
Q ss_pred CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001541 485 DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 485 ~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
.+.||++.+++|+..+.+. +++.| ++|+++. ...+.+++...++ ++|.|.|+++.+++.++|+.
T Consensus 230 ~~~k~~~~l~~~~~~l~~~---~~~~l~i~G~~~~-----------~~~~~~~~~~~~~-~~v~~~g~~~~~~~~~~~~~ 294 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR---PDIRFLIVGDGPE-----------KEELKELAKALGL-DNVTFLGRVPKEELPELLAA 294 (394)
T ss_pred ccccCHHHHHHHHHHHhhc---CCeEEEEeCCccc-----------HHHHHHHHHHcCC-CcEEEeCCCChHHHHHHHHh
Confidence 9999999999999999653 45554 7787765 2344555555555 67999999999999999999
Q ss_pred hhcCCcEEEEcCCCCCC-----CHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHH
Q 001541 564 AAKTKGVFINPAFIEPF-----GLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWA 638 (1057)
Q Consensus 564 Aa~~~dv~v~ps~~Egf-----gl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~ 638 (1057)
| |++++|+..|++ |++++|||+||+|||+++.|+..+++.++.+|+++++.|+++++++|.+++.+++.++
T Consensus 295 ~----di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~ 370 (394)
T cd03794 295 A----DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEAGAGLVVPPGDPEALAAAILELLDDPEERA 370 (394)
T ss_pred h----CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccCCcceEeCCCCHHHHHHHHHHHHhChHHHH
Confidence 9 999999988865 8889999999999999999999999998889999999999999999999999999999
Q ss_pred HHHHHHHHHh-hcCCHHHHHHHHH
Q 001541 639 RCRQNGLKNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 639 ~~~~~~~~~v-~~fsw~~~a~~~l 661 (1057)
++++++++.+ ++|||+.++++|+
T Consensus 371 ~~~~~~~~~~~~~~s~~~~~~~~~ 394 (394)
T cd03794 371 EMGENGRRYVEEKFSREKLAERLL 394 (394)
T ss_pred HHHHHHHHHHHHhhcHHHHHHhcC
Confidence 9999999999 4999999998873
|
wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase. |
| >cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-31 Score=312.56 Aligned_cols=374 Identities=18% Similarity=0.216 Sum_probs=251.3
Q ss_pred CCcHHHHHHHHHHHHhcC--CCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEcc-CCCccc
Q 001541 190 TGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIP-FGPKDK 266 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~--Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip-~~p~~~ 266 (1057)
.||.++.+++.+.+|.+. + |+|+|+|...+... .+.+. .-...|..+ ..+++.++++. .+ .
T Consensus 13 ggg~ervl~~a~~~l~~~~~~--~~v~i~t~~~~~~~--------~~~l~-~~~~~f~~~--~~~~~~~~~~~~~~---~ 76 (419)
T cd03806 13 GGGGERVLWCAVRALQKRYPN--NIVVIYTGDLDATP--------EEILE-KVESRFNIE--LDRPRIVFFLLKYR---K 76 (419)
T ss_pred CCCchHHHHHHHHHHHHhCCC--cEEEEECCCCCCCH--------HHHHH-HHHHhcCee--cCCCceEEEEecce---e
Confidence 459999999999999998 6 99999998753211 00000 000011111 12456655553 21 1
Q ss_pred ccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC-CCc-hHHHHHHHhcCCCCEEEEecCCch---
Q 001541 267 YIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY-ADA-GDSAALLSGALNVPMLFTGHSLGR--- 341 (1057)
Q Consensus 267 ~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~-~~~-~~~a~~l~~~~~iP~V~t~H~l~~--- 341 (1057)
++++ ..|+++..+...+...+ ..+....+ .+||||..|. +.. ..++.++ .++|+|+.+| ++
T Consensus 77 ~~~~-~~~~r~~~~~~~~~~~~----~~~~~~~~----~~pDv~i~~~g~~~~~~~~~~~---~~~~~i~y~h--~P~~~ 142 (419)
T cd03806 77 LVEA-STYPRFTLLGQALGSMI----LGLEALLK----LVPDIFIDTMGYPFTYPLVRLL---GGCPVGAYVH--YPTIS 142 (419)
T ss_pred eecc-ccCCceeeHHHHHHHHH----HHHHHHHh----cCCCEEEEcCCcccHHHHHHHh---cCCeEEEEec--CCcch
Confidence 2222 35565433322222222 22222111 3699998886 333 2333323 3889999999 33
Q ss_pred -hhHHHHHHhhh--------cchH----HHHHHH-HHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHH
Q 001541 342 -DKLEQLLKQAR--------LSRD----EINATY-KIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1057)
Q Consensus 342 -~~~~~l~~~g~--------~~~~----~~~~~y-k~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l 407 (1057)
+.+.. ...+. ..+. .+...| +.+.. .|+++++.||.|+++|+...+.+...+..
T Consensus 143 ~d~l~~-~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~--~~~~~~~~aD~ii~~S~~~~~~~~~~~~~--------- 210 (419)
T cd03806 143 TDMLQK-VRSREASYNNSATIARSPVLSKAKLLYYRLFAF--LYGLAGSFADVVMVNSTWTRNHIRSLWKR--------- 210 (419)
T ss_pred HHHHHH-HhhccccccCccchhccchHHHHHHHHHHHHHH--HHHHHhhcCCEEEECCHHHHHHHHHHhCc---------
Confidence 22211 11111 0111 112222 12222 47889999999999999877765443321
Q ss_pred HHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCC
Q 001541 408 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPK 487 (1057)
Q Consensus 408 ~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~ 487 (1057)
..++.|||||+|.+.|.+.... ...+.++|+|+||+.+.
T Consensus 211 --------------~~~~~vi~~gvd~~~~~~~~~~---------------------------~~~~~~~il~vgr~~~~ 249 (419)
T cd03806 211 --------------NTKPSIVYPPCDVEELLKLPLD---------------------------EKTRENQILSIAQFRPE 249 (419)
T ss_pred --------------CCCcEEEcCCCCHHHhcccccc---------------------------cccCCcEEEEEEeecCC
Confidence 1278999999998877542210 02456899999999999
Q ss_pred CCHHHHHHHHHhcccccCC---CcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHH
Q 001541 488 KNITTLVKAFGECRPLREL---ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 488 Kgi~~Ll~A~~~l~~~~~~---~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~ 563 (1057)
||++.+|+||..+.+..+. +++.| |+|++... +..++...++++++++++.++|.|+|.++.+++..+|+.
T Consensus 250 K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~-----~~~~~~~~L~~~~~~l~l~~~V~f~g~v~~~~l~~~l~~ 324 (419)
T cd03806 250 KNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE-----DDEKRVEDLKLLAKELGLEDKVEFVVNAPFEELLEELST 324 (419)
T ss_pred CCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc-----ccHHHHHHHHHHHHHhCCCCeEEEecCCCHHHHHHHHHh
Confidence 9999999999999754433 35665 77876431 123467889999999999999999999999999999999
Q ss_pred hhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc-hhhhh---cCCceEEeCCCCHHHHHHHHHHHHhCHHH-HH
Q 001541 564 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP-VDIHR---VLDNGLLVDPHDQQSVADALLKLVADKQL-WA 638 (1057)
Q Consensus 564 Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~-~eiv~---~~~~Gllv~p~d~~~la~aI~~ll~d~~~-~~ 638 (1057)
| |++|+|+..|+||++++||||||+|||+++.||+ .+++. ++.+|++++ |+++++++|.+++++++. ++
T Consensus 325 a----dv~v~~s~~E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~ 398 (419)
T cd03806 325 A----SIGLHTMWNEHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERL 398 (419)
T ss_pred C----eEEEECCccCCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHH
Confidence 9 9999999999999999999999999999999886 57887 789999985 999999999999996654 44
Q ss_pred HHHHHHHHHhhcCCHHHHH
Q 001541 639 RCRQNGLKNIHLFSWPEHC 657 (1057)
Q Consensus 639 ~~~~~~~~~v~~fsw~~~a 657 (1057)
.+++++++..++|||+.+.
T Consensus 399 ~~~~~~~~~~~~fs~~~f~ 417 (419)
T cd03806 399 RIRRAARSSVKRFSDEEFE 417 (419)
T ss_pred HHHHHHHHHHHhhCHHHhc
Confidence 4544444434899999765
|
ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides. |
| >PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.4e-32 Score=311.13 Aligned_cols=346 Identities=16% Similarity=0.160 Sum_probs=245.1
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcC--CCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDD 243 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~--Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~ 243 (1057)
|||++++.. + +..||+++++.+|+++|.+. | |+|.++++.... ...+ +
T Consensus 1 mkI~~~~~~-~-----------~~~GG~e~~~~~l~~~L~~~~~g--~~v~v~~~~~~~-~~~~--------~------- 50 (359)
T PRK09922 1 MKIAFIGEA-V-----------SGFGGMETVISNVINTFEESKIN--CEMFFFCRNDKM-DKAW--------L------- 50 (359)
T ss_pred CeeEEeccc-c-----------cCCCchhHHHHHHHHHhhhcCcc--eeEEEEecCCCC-ChHH--------H-------
Confidence 899999742 2 45799999999999999999 7 999999875310 0000 0
Q ss_pred cccccCCCCCeEEE-EccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHH
Q 001541 244 FMDDMGESSGAYII-RIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAA 322 (1057)
Q Consensus 244 ~~~~~~~~~gv~i~-rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~ 322 (1057)
..+.++ .++..+. +.+.. ...+.++.+.+.+ .+||+||+|...+...+.
T Consensus 51 --------~~~~~~~~~~~~~~----------~~~~~-----~~~~~~l~~~l~~-------~~~Dii~~~~~~~~~~~~ 100 (359)
T PRK09922 51 --------KEIKYAQSFSNIKL----------SFLRR-----AKHVYNFSKWLKE-------TQPDIVICIDVISCLYAN 100 (359)
T ss_pred --------Hhcchhcccccchh----------hhhcc-----cHHHHHHHHHHHh-------cCCCEEEEcCHHHHHHHH
Confidence 001100 0110000 00000 0111222223322 579999999876666666
Q ss_pred HHHhcCCCC--EEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 323 LLSGALNVP--MLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 323 ~l~~~~~iP--~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
.+++..++| ++.+.|....... .+. ...+..+|.++++|+...+.+... +.
T Consensus 101 ~~~~~~~~~~~~~~~~h~~~~~~~----------------~~~--------~~~~~~~d~~i~~S~~~~~~~~~~--~~- 153 (359)
T PRK09922 101 KARKKSGKQFKIFSWPHFSLDHKK----------------HAE--------CKKITCADYHLAISSGIKEQMMAR--GI- 153 (359)
T ss_pred HHHHHhCCCCeEEEEecCcccccc----------------hhh--------hhhhhcCCEEEEcCHHHHHHHHHc--CC-
Confidence 666666655 4666675422110 000 012368999999998876665431 12
Q ss_pred hHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEE
Q 001541 401 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480 (1057)
Q Consensus 401 ~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 480 (1057)
+.+++.+||||+|.+.+...... ..++++|++
T Consensus 154 --------------------~~~ki~vi~N~id~~~~~~~~~~----------------------------~~~~~~i~~ 185 (359)
T PRK09922 154 --------------------SAQRISVIYNPVEIKTIIIPPPE----------------------------RDKPAVFLY 185 (359)
T ss_pred --------------------CHHHEEEEcCCCCHHHccCCCcc----------------------------cCCCcEEEE
Confidence 22389999999997654321100 134688999
Q ss_pred EeCCC--CCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC--C
Q 001541 481 LARPD--PKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ--S 555 (1057)
Q Consensus 481 vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~--~ 555 (1057)
+||+. +.||+..+++|+..+.+ ++. +++|+|++ ...+.++++++++.++|.|+|+++. +
T Consensus 186 ~Grl~~~~~k~~~~l~~a~~~~~~-----~~~l~ivG~g~~-----------~~~l~~~~~~~~l~~~v~f~G~~~~~~~ 249 (359)
T PRK09922 186 VGRLKFEGQKNVKELFDGLSQTTG-----EWQLHIIGDGSD-----------FEKCKAYSRELGIEQRIIWHGWQSQPWE 249 (359)
T ss_pred EEEEecccCcCHHHHHHHHHhhCC-----CeEEEEEeCCcc-----------HHHHHHHHHHcCCCCeEEEecccCCcHH
Confidence 99986 45999999999998742 445 48898875 4567888999999999999998754 6
Q ss_pred cHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-CCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 556 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 556 dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
++..+|+.| |++|+||..||||++++||||||+|||+|+ .||+.|++.++.+|++++|+|+++++++|.++++++
T Consensus 250 ~~~~~~~~~----d~~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 250 VVQQKIKNV----SALLLTSKFEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKPGLNGELYTPGNIDEFVGKLNKVISGE 325 (359)
T ss_pred HHHHHHhcC----cEEEECCcccCcChHHHHHHHcCCCEEEeCCCCChHHHccCCCceEEECCCCHHHHHHHHHHHHhCc
Confidence 899999999 999999999999999999999999999999 899999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 001541 635 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
+.+ ......+.+.+|+-+..++++..+|..++
T Consensus 326 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (359)
T PRK09922 326 VKY--QHDAIPNSIERFYEVLYFKNLNNALFSKL 357 (359)
T ss_pred ccC--CHHHHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 754 22333344578899999999999998765
|
|
| >PLN02949 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-31 Score=311.08 Aligned_cols=412 Identities=15% Similarity=0.164 Sum_probs=274.5
Q ss_pred hhhhcccCCcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCee--eEEEEecCCCCCCCCCccCCc
Q 001541 155 ETWISQQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVY--RVDLLTRQVSAPDVDWSYGEP 232 (1057)
Q Consensus 155 ~~~~~~~~~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~--~V~vit~~~~~~~~~~~y~~~ 232 (1057)
.+|--...+++++|+++.++. | ..||.++.+++.+.+|.+.| + .|.++|...+...
T Consensus 23 ~~~~~~~~~~~~~v~f~HP~~---------~---~ggG~ERvl~~a~~~l~~~~--~~~~v~iyt~~~d~~~-------- 80 (463)
T PLN02949 23 LSVLRARRSRKRAVGFFHPYT---------N---DGGGGERVLWCAVRAIQEEN--PDLDCVIYTGDHDASP-------- 80 (463)
T ss_pred HHHHhcccCCCcEEEEECCCC---------C---CCCChhhHHHHHHHHHHhhC--CCCeEEEEcCCCCCCH--------
Confidence 345555566778999995322 2 35699999999999999998 7 7888887643211
Q ss_pred ccccCCCCCCccccccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEE
Q 001541 233 TEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHG 312 (1057)
Q Consensus 233 ~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~ 312 (1057)
.+.+.. ..+.|.-++. ....++++..+ .+++ ...|+++.-+.. .+..+....+.+.. ..|||+.-
T Consensus 81 ~~~l~~-~~~~~~i~~~--~~~~~v~l~~~---~~~~-~~~~~~~t~~~~-~~~~~~l~~~~~~~-------~~p~v~vD 145 (463)
T PLN02949 81 DSLAAR-ARDRFGVELL--SPPKVVHLRKR---KWIE-EETYPRFTMIGQ-SLGSVYLAWEALCK-------FTPLYFFD 145 (463)
T ss_pred HHHHHH-HHhhcceecC--CCceEEEeccc---cccc-cccCCceehHHH-HHHHHHHHHHHHHh-------cCCCEEEe
Confidence 111100 0011211111 12233333211 3343 345666543322 22222222233322 24665543
Q ss_pred cCCC-chHHHHHHHhcCCCCEEEEecCCchhh--HHHHHHhhh--------cch----HHHHHHHHHHHHHHHHHHHhhc
Q 001541 313 HYAD-AGDSAALLSGALNVPMLFTGHSLGRDK--LEQLLKQAR--------LSR----DEINATYKIMRRIEAEELSLDA 377 (1057)
Q Consensus 313 h~~~-~~~~a~~l~~~~~iP~V~t~H~l~~~~--~~~l~~~g~--------~~~----~~~~~~yk~~~ri~~E~~~l~~ 377 (1057)
.... ..+. +.+..++|+++++|...-.. +... ..+. ... ......|...... .++++.+.
T Consensus 146 t~~~~~~~p---l~~~~~~~v~~yvH~p~~~~dm~~~v-~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~-l~~~~~~~ 220 (463)
T PLN02949 146 TSGYAFTYP---LARLFGCKVVCYTHYPTISSDMISRV-RDRSSMYNNDASIARSFWLSTCKILYYRAFAW-MYGLVGRC 220 (463)
T ss_pred CCCcccHHH---HHHhcCCcEEEEEeCCcchHHHHHHH-hhcccccCccchhhccchhHHHHHHHHHHHHH-HHHHHcCC
Confidence 3321 2222 22345899999999542211 1110 0000 000 1122222211111 47788899
Q ss_pred CCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCC
Q 001541 378 SEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPAS 457 (1057)
Q Consensus 378 ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~ 457 (1057)
||.|+++|+...+.+.+.+.. ..++.+++||+|...+......
T Consensus 221 ad~ii~nS~~t~~~l~~~~~~-----------------------~~~i~vvyp~vd~~~~~~~~~~-------------- 263 (463)
T PLN02949 221 AHLAMVNSSWTKSHIEALWRI-----------------------PERIKRVYPPCDTSGLQALPLE-------------- 263 (463)
T ss_pred CCEEEECCHHHHHHHHHHcCC-----------------------CCCeEEEcCCCCHHHcccCCcc--------------
Confidence 999999999877765443321 1278999999998765321100
Q ss_pred CCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCCcccchhhHHHHHHHH
Q 001541 458 PDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDGIDEMSSTSASVLLSVL 534 (1057)
Q Consensus 458 ~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~--~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~ 534 (1057)
..+++++|+++||+.++||++.+|+||..+.+.. ..+++.| |+|++.. .++.++..+++
T Consensus 264 -------------~~~~~~~il~vGR~~~~Kg~~llI~A~~~l~~~~~~~~~~~~LvIvG~~~~-----~~~~~~~~eL~ 325 (463)
T PLN02949 264 -------------RSEDPPYIISVAQFRPEKAHALQLEAFALALEKLDADVPRPKLQFVGSCRN-----KEDEERLQKLK 325 (463)
T ss_pred -------------ccCCCCEEEEEEeeeccCCHHHHHHHHHHHHHhccccCCCcEEEEEeCCCC-----cccHHHHHHHH
Confidence 0235678999999999999999999999875421 2345665 7787642 12245678899
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch-hhhhc---CC
Q 001541 535 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV-DIHRV---LD 610 (1057)
Q Consensus 535 ~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~-eiv~~---~~ 610 (1057)
++++++++.++|.|+|+++.+++..+|+.| +++|+|+..|+||++++||||+|+|||+++.||+. |++.+ +.
T Consensus 326 ~la~~l~L~~~V~f~g~v~~~el~~ll~~a----~~~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~ 401 (463)
T PLN02949 326 DRAKELGLDGDVEFHKNVSYRDLVRLLGGA----VAGLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQ 401 (463)
T ss_pred HHHHHcCCCCcEEEeCCCCHHHHHHHHHhC----cEEEeCCccCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCc
Confidence 999999999999999999999999999999 99999999999999999999999999999999975 77754 56
Q ss_pred ceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 611 NGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 611 ~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
+|++++ |+++++++|.++++ ++++++++++++++.+++|||+.+++++.+.+..+..
T Consensus 402 tG~l~~--~~~~la~ai~~ll~~~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~~ 459 (463)
T PLN02949 402 TGFLAT--TVEEYADAILEVLRMRETERLEIAAAARKRANRFSEQRFNEDFKDAIRPILN 459 (463)
T ss_pred ccccCC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHh
Confidence 899985 99999999999998 6788999999999999889999999999999987654
|
|
| >cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-31 Score=304.04 Aligned_cols=285 Identities=24% Similarity=0.282 Sum_probs=220.1
Q ss_pred CcceEEEEcCC--CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEE
Q 001541 305 VWPVAIHGHYA--DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 382 (1057)
Q Consensus 305 ~~pDvIh~h~~--~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi 382 (1057)
.+||+||+|.. .....+..+++..++|+|++.|+........ . ....+.......+...+..++.++
T Consensus 86 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~i~ 154 (375)
T cd03821 86 READIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALP--------H---KALKKRLAWFLFERRLLQAAAAVH 154 (375)
T ss_pred CCCCEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccc--------c---chhhhHHHHHHHHHHHHhcCCEEE
Confidence 46999999973 3445555666778999999999875433210 0 001112222234566789999999
Q ss_pred ecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+++..........+ +..++.+||||+|.+.|.+.....
T Consensus 155 ~~s~~~~~~~~~~~------------------------~~~~~~vi~~~~~~~~~~~~~~~~------------------ 192 (375)
T cd03821 155 ATSEQEAAEIRRLG------------------------LKAPIAVIPNGVDIPPFAALPSRG------------------ 192 (375)
T ss_pred ECCHHHHHHHHhhC------------------------CcccEEEcCCCcChhccCcchhhh------------------
Confidence 99976655543221 123899999999998876432110
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcC
Q 001541 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 541 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~ 541 (1057)
....+....++++|+++||+.+.||++.+++|+..+... .+++.+ ++|.++.. +...+..++.+++
T Consensus 193 --~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~~~l~i~G~~~~~---------~~~~~~~~~~~~~ 259 (375)
T cd03821 193 --RRRKFPILPDKRIILFLGRLHPKKGLDLLIEAFAKLAER--FPDWHLVIAGPDEGG---------YRAELKQIAAALG 259 (375)
T ss_pred --hhhhccCCCCCcEEEEEeCcchhcCHHHHHHHHHHhhhh--cCCeEEEEECCCCcc---------hHHHHHHHHHhcC
Confidence 012233356788999999999999999999999999754 345554 77876431 2344555568889
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHH
Q 001541 542 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQ 621 (1057)
Q Consensus 542 l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1057)
+.++|.|+|+++.+++..+|+.| |++|+||..|+||++++||||||+|||+++.||..+++.+ .+|+++++ +.+
T Consensus 260 ~~~~v~~~g~~~~~~~~~~~~~a----dv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~-~~~~~~~~-~~~ 333 (375)
T cd03821 260 LEDRVTFTGMLYGEDKAAALADA----DLFVLPSHSENFGIVVAEALACGTPVVTTDKVPWQELIEY-GCGWVVDD-DVD 333 (375)
T ss_pred ccceEEEcCCCChHHHHHHHhhC----CEEEeccccCCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc-CceEEeCC-ChH
Confidence 99999999999999999999999 9999999999999999999999999999999999999988 78888864 669
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 001541 622 SVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l 661 (1057)
+++++|.+++++++.++.+++++++.+ ++|||+..+++|+
T Consensus 334 ~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 334 ALAAALRRALELPQRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 999999999999999999999999997 7999999999886
|
Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide. |
| >PLN02846 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-31 Score=308.10 Aligned_cols=383 Identities=16% Similarity=0.094 Sum_probs=245.5
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCC
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSD 242 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~ 242 (1057)
.++|||++++.-.+ |..+|+...+..++..|+++|. |+|+|+++.....+....|+.....-.+...+
T Consensus 2 ~~~mrIaivTdt~l-----------P~vnGva~s~~~~a~~L~~~G~-heV~vvaP~~~~~~~~~~~~~~~~f~~~~~~e 69 (462)
T PLN02846 2 QKKQHIAIFTTASL-----------PWMTGTAVNPLFRAAYLAKDGD-REVTLVIPWLSLKDQKLVYPNKITFSSPSEQE 69 (462)
T ss_pred CCCCEEEEEEcCCC-----------CCCCCeeccHHHHHHHHHhcCC-cEEEEEecCCccccccccccccccccCchhhh
Confidence 35799999997776 8999999999999999999983 49999988642111111111000000000000
Q ss_pred ccccccCCCCCeEEEEccCCCcccccccccCCCChhH-HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-CchHH
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPE-FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDS 320 (1057)
Q Consensus 243 ~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~-f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~-~~~~~ 320 (1057)
..+.+..+-++.++|.-+...|-.+ .-+++... ....+ .+.|.+ .+|||||+|.+ ..|+.
T Consensus 70 ---~~~~~~~~~~v~r~~s~~~p~yp~r-~~~~~r~~~~~~~i-------~~~l~~-------~~pDVIHv~tP~~LG~~ 131 (462)
T PLN02846 70 ---AYVRQWLEERISFLPKFSIKFYPGK-FSTDKRSILPVGDI-------SETIPD-------EEADIAVLEEPEHLTWY 131 (462)
T ss_pred ---hhhhhhccCeEEEecccccccCccc-ccccccccCChHHH-------HHHHHh-------cCCCEEEEcCchhhhhH
Confidence 0011111334555554332111110 00000000 01112 222222 67999999987 45555
Q ss_pred --HHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHh-hcCCEEEecCHHHHHHHHhhhC
Q 001541 321 --AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSL-DASEIVITSTRQEIEEQWRLYD 397 (1057)
Q Consensus 321 --a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l-~~ad~Vi~~S~~~~~~~~~~y~ 397 (1057)
+..+++++++ +|.|.|.-+.++.... ..|.... ...++..++ +. ..+|.|++.|....+ +.+
T Consensus 132 ~~g~~~~~k~~~-vV~tyHT~y~~Y~~~~-~~g~~~~----~l~~~~~~~-----~~r~~~d~vi~pS~~~~~-l~~--- 196 (462)
T PLN02846 132 HHGKRWKTKFRL-VIGIVHTNYLEYVKRE-KNGRVKA----FLLKYINSW-----VVDIYCHKVIRLSAATQD-YPR--- 196 (462)
T ss_pred HHHHHHHhcCCc-EEEEECCChHHHHHHh-ccchHHH----HHHHHHHHH-----HHHHhcCEEEccCHHHHH-Hhh---
Confidence 6667776655 8889999665443321 1111111 111122221 21 238999999974322 211
Q ss_pred CCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCC--C
Q 001541 398 GFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPR--K 475 (1057)
Q Consensus 398 ~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 475 (1057)
.+.+.++|||.+.|.+.... . .......+ .
T Consensus 197 --------------------------~~i~~v~GVd~~~f~~~~~~-------------------~---~~~~~~~~~~~ 228 (462)
T PLN02846 197 --------------------------SIICNVHGVNPKFLEIGKLK-------------------L---EQQKNGEQAFT 228 (462)
T ss_pred --------------------------CEEecCceechhhcCCCccc-------------------H---hhhcCCCCCcc
Confidence 34455699999988754211 0 01111222 3
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001541 476 PVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 554 (1057)
Q Consensus 476 ~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~ 554 (1057)
+.++|+||+.+.||++.||+|+.++... .+++. +|+|+|++ ..++++++.++++..++ |.|..
T Consensus 229 ~~~l~vGRL~~eK~~~~Li~a~~~l~~~--~~~~~l~ivGdGp~-----------~~~L~~~a~~l~l~~~v-f~G~~-- 292 (462)
T PLN02846 229 KGAYYIGKMVWSKGYKELLKLLHKHQKE--LSGLEVDLYGSGED-----------SDEVKAAAEKLELDVRV-YPGRD-- 292 (462)
T ss_pred eEEEEEecCcccCCHHHHHHHHHHHHhh--CCCeEEEEECCCcc-----------HHHHHHHHHhcCCcEEE-ECCCC--
Confidence 5799999999999999999999998642 34555 48899987 56678888888886444 88863
Q ss_pred CcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 555 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
+..++|+.+ ||||+||..|+||++++||||||+|||+++.++ .+++.++.||++++ |.++++++|.++|+++
T Consensus 293 -~~~~~~~~~----DvFv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~-~~~v~~~~ng~~~~--~~~~~a~ai~~~l~~~ 364 (462)
T PLN02846 293 -HADPLFHDY----KVFLNPSTTDVVCTTTAEALAMGKIVVCANHPS-NEFFKQFPNCRTYD--DGKGFVRATLKALAEE 364 (462)
T ss_pred -CHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCcEEEecCCC-cceeecCCceEecC--CHHHHHHHHHHHHccC
Confidence 445799999 999999999999999999999999999999998 59999999999995 8999999999999853
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 001541 635 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~ 667 (1057)
. ..++..+ .+.|||+..+++|++.|+-.
T Consensus 365 ~--~~~~~~a---~~~~SWe~~~~~l~~~~~~~ 392 (462)
T PLN02846 365 P--APLTDAQ---RHELSWEAATERFLRVADLD 392 (462)
T ss_pred c--hhHHHHH---HHhCCHHHHHHHHHHHhccC
Confidence 2 2222222 25999999999999999743
|
|
| >cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-31 Score=301.32 Aligned_cols=371 Identities=23% Similarity=0.317 Sum_probs=265.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++++.... |..||...++.+++++|.+.| |+|+++|..........
T Consensus 1 kil~~~~~~~-----------p~~~G~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~------------------- 48 (374)
T cd03817 1 KIGIFTDTYL-----------PQVNGVATSIRRLAEELEKRG--HEVYVVAPSYPGAPEEE------------------- 48 (374)
T ss_pred CeeEeehhcc-----------CCCCCeehHHHHHHHHHHHcC--CeEEEEeCCCCCCCccc-------------------
Confidence 5888885443 789999999999999999999 99999987642211100
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-CchHHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLS 325 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~-~~~~~a~~l~ 325 (1057)
...++...+.+... .....+.+ .+...+ .+.+.+ .+||+||+|.. ..+..+..++
T Consensus 49 ---~~~~~~~~~~~~~~-----~~~~~~~~--~~~~~~-------~~~~~~-------~~~Div~~~~~~~~~~~~~~~~ 104 (374)
T cd03817 49 ---EVVVVRPFRVPTFK-----YPDFRLPL--PIPRAL-------IIILKE-------LGPDIVHTHTPFSLGLLGLRVA 104 (374)
T ss_pred ---ccccccccccccch-----hhhhhccc--cHHHHH-------HHHHhh-------cCCCEEEECCchhhhhHHHHHH
Confidence 00011111110000 00000110 011111 111111 57999999985 3455667778
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|++.|+........... .... ......+ ..++..+..+|.+++.|+...+.+... .
T Consensus 105 ~~~~~~~i~~~~~~~~~~~~~~~~-~~~~------~~~~~~~-~~~~~~~~~~d~i~~~s~~~~~~~~~~-~-------- 167 (374)
T cd03817 105 RKLGIPVVATYHTMYEDYTHYVPL-GRLL------ARAVVRR-KLSRRFYNRCDAVIAPSEKIADLLREY-G-------- 167 (374)
T ss_pred HHcCCCEEEEecCCHHHHHHHHhc-ccch------hHHHHHH-HHHHHHhhhCCEEEeccHHHHHHHHhc-C--------
Confidence 888999999999987643322111 1100 0011110 246678999999999999866554321 1
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.. .++.++|||+|...+.+.... ..+..+...++++.|+++|++.
T Consensus 168 --------------~~-~~~~vi~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~i~~~G~~~ 212 (374)
T cd03817 168 --------------VK-RPIEVIPTGIDLDRFEPVDGD--------------------DERRKLGIPEDEPVLLYVGRLA 212 (374)
T ss_pred --------------CC-CceEEcCCccchhccCccchh--------------------HHHHhcCCCCCCeEEEEEeeee
Confidence 11 168999999999877643211 0122333346678999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
+.||++.+++|+..+... .+++.+ ++|+++. ...+..+++++++.++|.|+|+++.+++..+|+.|
T Consensus 213 ~~k~~~~l~~~~~~~~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 279 (374)
T cd03817 213 KEKNIDFLIRAFARLLKE--EPDVKLVIVGDGPE-----------REELEELARELGLADRVIFTGFVPREELPDYYKAA 279 (374)
T ss_pred cccCHHHHHHHHHHHHHh--CCCeEEEEEeCCch-----------HHHHHHHHHHcCCCCcEEEeccCChHHHHHHHHHc
Confidence 999999999999998653 345665 7787653 45677788888998999999999999999999999
Q ss_pred hcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHH
Q 001541 565 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNG 644 (1057)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~ 644 (1057)
|++++|+..|++|++++|||+||+|||+++.|+..+++.++.+|+++++.+. +++++|.+++++++.++++++++
T Consensus 280 ----d~~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~-~~~~~i~~l~~~~~~~~~~~~~~ 354 (374)
T cd03817 280 ----DLFVFASTTETQGLVLLEAMAAGLPVVAVDAPGLPDLVADGENGFLFPPGDE-ALAEALLRLLQDPELRRRLSKNA 354 (374)
T ss_pred ----CEEEecccccCcChHHHHHHHcCCcEEEeCCCChhhheecCceeEEeCCCCH-HHHHHHHHHHhChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999998888 99999999999999999999999
Q ss_pred HHHhhcCCHHHHHHHHHHHHHc
Q 001541 645 LKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 645 ~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
++.+++|+ +++++.++|++
T Consensus 355 ~~~~~~~~---~~~~~~~~~~~ 373 (374)
T cd03817 355 EESAEKFS---FAKKVEKLYEE 373 (374)
T ss_pred HHHHHHHH---HHHHHHHHHhc
Confidence 99997666 56666666654
|
UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol. |
| >cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-31 Score=301.90 Aligned_cols=268 Identities=23% Similarity=0.306 Sum_probs=219.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|+. ....++...++..++|++++.|+....... . . ..++..++.+|.+++
T Consensus 78 ~~~Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-----~-------~~~~~~~~~~~~vi~ 136 (355)
T cd03799 78 LGIDHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP---------D-----A-------IDLDEKLARADFVVA 136 (355)
T ss_pred cCCCEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC---------c-----h-------HHHHHHHhhCCEEEE
Confidence 56999999987 444455555555689999999965321100 0 0 124456889999999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
+|+...+.+...+. ....++.+||||+|.+.|.+...
T Consensus 137 ~s~~~~~~l~~~~~----------------------~~~~~~~vi~~~~d~~~~~~~~~--------------------- 173 (355)
T cd03799 137 ISEYNRQQLIRLLG----------------------CDPDKIHVVHCGVDLERFPPRPP--------------------- 173 (355)
T ss_pred CCHHHHHHHHHhcC----------------------CCcccEEEEeCCcCHHHcCCccc---------------------
Confidence 99998877655431 22238999999999887764320
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ...+...+.++++
T Consensus 174 ------~~~~~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 234 (355)
T cd03799 174 ------PPPGEPLRILSVGRLVEKKGLDYLLEALALLKDR--GIDFRLDIVGDGPL-----------RDELEALIAELGL 234 (355)
T ss_pred ------cccCCCeEEEEEeeeccccCHHHHHHHHHHHhhc--CCCeEEEEEECCcc-----------HHHHHHHHHHcCC
Confidence 0134567899999999999999999999998653 356665 7888765 3556777888899
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCC------CCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeC
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI------EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 616 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~------Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 616 (1057)
.++|.|.|+++.+++..+|+.| |++|+|+.. |+||++++||||+|+|||+++.|+..+++.++.+|++++
T Consensus 235 ~~~v~~~g~~~~~~l~~~~~~a----di~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~~~g~~~~ 310 (355)
T cd03799 235 EDRVTLLGAKSQEEVRELLRAA----DLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDGETGLLVP 310 (355)
T ss_pred CCeEEECCcCChHHHHHHHHhC----CEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCCCceEEeC
Confidence 8999999999999999999999 999999998 999999999999999999999999999999988999999
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHH
Q 001541 617 PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKT 659 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~ 659 (1057)
+.|.++++++|.+++++++.+.++++++++.+ ++|||+..+++
T Consensus 311 ~~~~~~l~~~i~~~~~~~~~~~~~~~~a~~~~~~~~s~~~~~~~ 354 (355)
T cd03799 311 PGDPEALADAIERLLDDPELRREMGEAGRARVEEEFDIRKQAAR 354 (355)
T ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHhhc
Confidence 99999999999999999999999999999999 69999998865
|
amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor. |
| >cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-31 Score=304.89 Aligned_cols=335 Identities=19% Similarity=0.210 Sum_probs=243.0
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
..||.++++.+++++|++.| |+|++++....... +.. .....++.+++++....
T Consensus 10 ~~GG~~~~~~~l~~~L~~~~--~~v~~i~~~~~~~~----~~~----------------~~~~~~~~~~~~~~~~~---- 63 (358)
T cd03812 10 NRGGIETFIMNYYRNLDRSK--IQFDFLVTSKEEGD----YDD----------------EIEKLGGKIYYIPARKK---- 63 (358)
T ss_pred CCccHHHHHHHHHHhcCccc--eEEEEEEeCCCCcc----hHH----------------HHHHcCCeEEEecCCCc----
Confidence 58999999999999999998 99999987532110 000 01123666666443211
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCE-EEEecCCchhhHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPM-LFTGHSLGRDKLEQL 347 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~-V~t~H~l~~~~~~~l 347 (1057)
.+..+. ..+.+.+.+ .+||+||+|+.....++..+++..+.|. +++.|+........
T Consensus 64 -------~~~~~~-------~~~~~~~~~-------~~~Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~- 121 (358)
T cd03812 64 -------NPLKYF-------KKLYKLIKK-------NKYDIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKK- 121 (358)
T ss_pred -------cHHHHH-------HHHHHHHhc-------CCCCEEEEeCcchhHHHHHHHhhCCCCeEEEEecccccccccc-
Confidence 111111 111122222 5799999999876666666666677775 67888765432110
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
. ..... ...+...+..++.++++|....+.+... .. ..++.+
T Consensus 122 ------~-----~~~~~---~~~~~~~~~~~~~~i~~s~~~~~~~~~~---~~---------------------~~~~~v 163 (358)
T cd03812 122 ------K-----KILKY---KVLRKLINRLATDYLACSEEAGKWLFGK---VK---------------------NKKFKV 163 (358)
T ss_pred ------c-----hhhHH---HHHHHHHHhcCCEEEEcCHHHHHHHHhC---CC---------------------cccEEE
Confidence 0 00000 1124567889999999999877665432 11 138999
Q ss_pred eCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001541 428 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 507 (1057)
Q Consensus 428 IpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~ 507 (1057)
||||+|.+.|.+.... ..........++++.|+++||+.+.||++.+++|+..+.+.. +
T Consensus 164 i~ngvd~~~~~~~~~~-------------------~~~~~~~~~~~~~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~--~ 222 (358)
T cd03812 164 IPNGIDLEKFIFNEEI-------------------RKKRRELGILEDKFVIGHVGRFSEQKNHEFLIEIFAELLKKN--P 222 (358)
T ss_pred EeccCcHHHcCCCchh-------------------hhHHHHcCCCCCCEEEEEEeccccccChHHHHHHHHHHHHhC--C
Confidence 9999999887643211 011233344567899999999999999999999999997543 5
Q ss_pred cEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHH
Q 001541 508 NLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 586 (1057)
Q Consensus 508 ~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lE 586 (1057)
++.+ |+|+++. ...+.+.++++++.++|.|+|+ .+++..+|+.| |++|+||..|+||++++|
T Consensus 223 ~~~l~ivG~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~E~~~~~~lE 285 (358)
T cd03812 223 NAKLLLVGDGEL-----------EEEIKKKVKELGLEDKVIFLGV--RNDVPELLQAM----DVFLFPSLYEGLPLVLIE 285 (358)
T ss_pred CeEEEEEeCCch-----------HHHHHHHHHhcCCCCcEEEecc--cCCHHHHHHhc----CEEEecccccCCCHHHHH
Confidence 5664 8898774 4567778888999999999998 68999999999 999999999999999999
Q ss_pred HHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh
Q 001541 587 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI 648 (1057)
Q Consensus 587 AmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v 648 (1057)
|||+|+|||+|+.||..+++.+ ..|++..+.++++++++|.+++++|+.++.++..+....
T Consensus 286 Ama~G~PvI~s~~~~~~~~i~~-~~~~~~~~~~~~~~a~~i~~l~~~~~~~~~~~~~~~~~~ 346 (358)
T cd03812 286 AQASGLPCILSDTITKEVDLTD-LVKFLSLDESPEIWAEEILKLKSEDRRERSSESIKKKGL 346 (358)
T ss_pred HHHhCCCEEEEcCCchhhhhcc-CccEEeCCCCHHHHHHHHHHHHhCcchhhhhhhhhhccc
Confidence 9999999999999999999988 556667677899999999999999999888877766655
|
capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1). |
| >cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-30 Score=296.12 Aligned_cols=351 Identities=21% Similarity=0.247 Sum_probs=256.8
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 269 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~ 269 (1057)
.||.++++..|+++|.+.| ++|.+++.....+. ... ....++.++.++....
T Consensus 11 ~gG~~~~~~~l~~~l~~~~--~~v~~~~~~~~~~~--------~~~-------------~~~~~i~v~~~~~~~~----- 62 (365)
T cd03807 11 VGGAERMLVRLLKGLDRDR--FEHVVISLTDRGEL--------GEE-------------LEEAGVPVYCLGKRPG----- 62 (365)
T ss_pred CccHHHHHHHHHHHhhhcc--ceEEEEecCcchhh--------hHH-------------HHhcCCeEEEEecccc-----
Confidence 4999999999999999998 99999986532110 000 0113667766654211
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHH
Q 001541 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 270 k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
+... .+...+ .+.+.+ .+||+||+|.......+...+.. .++|++++.|+......
T Consensus 63 ----~~~~-~~~~~~-------~~~~~~-------~~~div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~---- 119 (365)
T cd03807 63 ----RPDP-GALLRL-------YKLIRR-------LRPDVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG---- 119 (365)
T ss_pred ----cccH-HHHHHH-------HHHHHh-------hCCCEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc----
Confidence 1111 111112 222222 57999999977655555555554 68999999999865421
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
+. .. ++... .+......++.++++|+...+.+... ++. ..++.++
T Consensus 120 --~~-----~~---~~~~~--~~~~~~~~~~~~i~~s~~~~~~~~~~--~~~---------------------~~~~~vi 164 (365)
T cd03807 120 --KK-----ST---RLVAR--LRRLLSSFIPLIVANSAAAAEYHQAI--GYP---------------------PKKIVVI 164 (365)
T ss_pred --ch-----hH---hHHHH--HHHHhccccCeEEeccHHHHHHHHHc--CCC---------------------hhheeEe
Confidence 00 00 11111 24456788999999998876655432 222 2388999
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 508 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~ 508 (1057)
|||+|...|.+.... ....+.++..+++.++|+++||+.+.||++.+++|+..+.+. .++
T Consensus 165 ~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~i~~~G~~~~~K~~~~li~a~~~l~~~--~~~ 224 (365)
T cd03807 165 PNGVDTERFSPDLDA------------------RARLREELGLPEDTFLIGIVARLHPQKDHATLLRAAALLLKK--FPN 224 (365)
T ss_pred CCCcCHHhcCCcccc------------------hHHHHHhcCCCCCCeEEEEecccchhcCHHHHHHHHHHHHHh--CCC
Confidence 999998877643211 111223344456778999999999999999999999998653 445
Q ss_pred EEE-EEecCCCCcccchhhHHHHHHHHHHHH-HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHH
Q 001541 509 LTL-IMGNRDGIDEMSSTSASVLLSVLKLID-KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 586 (1057)
Q Consensus 509 l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~-~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lE 586 (1057)
+.+ ++|.++.. ..+..... .+++.++|.|.|. .+++..+|+.| |++|+|+..|+||++++|
T Consensus 225 ~~l~i~G~~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~v~ps~~e~~~~~~~E 287 (365)
T cd03807 225 ARLLLVGDGPDR-----------ANLELLALKELGLEDKVILLGE--RSDVPALLNAL----DVFVLSSLSEGFPNVLLE 287 (365)
T ss_pred eEEEEecCCcch-----------hHHHHHHHHhcCCCceEEEccc--cccHHHHHHhC----CEEEeCCccccCCcHHHH
Confidence 665 67876642 22333444 7788889999996 57899999999 999999999999999999
Q ss_pred HHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 587 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 587 AmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
||+||+|||+++.|+..+++.+ +|+++++.|+++++++|.+++++++.+.++++++++.+ ++|||+..+++|.++|+
T Consensus 288 a~a~g~PvI~~~~~~~~e~~~~--~g~~~~~~~~~~l~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~ 365 (365)
T cd03807 288 AMACGLPVVATDVGDNAELVGD--TGFLVPPGDPEALAEAIEALLADPALRQALGEAARERIEENFSIEAMVEAYEELYR 365 (365)
T ss_pred HHhcCCCEEEcCCCChHHHhhc--CCEEeCCCCHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhC
Confidence 9999999999999999999876 89999999999999999999999999999999999999 68999999999999874
|
WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis. |
| >cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-30 Score=298.06 Aligned_cols=346 Identities=20% Similarity=0.245 Sum_probs=244.8
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
..||.++++.+|+++|.+.| |+|++++.... +... .. .....+..++....
T Consensus 10 ~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~-~~~~-----~~-----------------~~~~~~~~~~~~~~---- 60 (360)
T cd04951 10 GLGGAEKQVVDLADQFVAKG--HQVAIISLTGE-SEVK-----PP-----------------IDATIILNLNMSKN---- 60 (360)
T ss_pred CCCCHHHHHHHHHHhcccCC--ceEEEEEEeCC-CCcc-----ch-----------------hhccceEEeccccc----
Confidence 37999999999999999999 99999986421 1000 00 00111112221110
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQL 347 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l 347 (1057)
.+.++ ..+..+.+.+.+ .+||+||+|...+..++.++... .++|+|+|.|+......
T Consensus 61 ----~~~~~--------~~~~~~~~~~~~-------~~pdiv~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~--- 118 (360)
T cd04951 61 ----PLSFL--------LALWKLRKILRQ-------FKPDVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGR--- 118 (360)
T ss_pred ----chhhH--------HHHHHHHHHHHh-------cCCCEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhH---
Confidence 11111 111112222222 57999999987666555554433 46799999998743210
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
...+. .+.....++.++++|....+.+.... +.+..++.+
T Consensus 119 -------------~~~~~-----~~~~~~~~~~~~~~s~~~~~~~~~~~----------------------~~~~~~~~~ 158 (360)
T cd04951 119 -------------LRMLA-----YRLTDFLSDLTTNVSKEALDYFIASK----------------------AFNANKSFV 158 (360)
T ss_pred -------------HHHHH-----HHHHhhccCceEEEcHHHHHHHHhcc----------------------CCCcccEEE
Confidence 00111 12234457778888877666554321 112238999
Q ss_pred eCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001541 428 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 507 (1057)
Q Consensus 428 IpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~ 507 (1057)
||||+|...|.+... ........+...+++++++++||+.+.||++.+++|+.++.+.. +
T Consensus 159 i~ng~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~l~~g~~~~~kg~~~li~a~~~l~~~~--~ 218 (360)
T cd04951 159 VYNGIDTDRFRKDPA------------------RRLKIRNALGVKNDTFVILAVGRLVEAKDYPNLLKAFAKLLSDY--L 218 (360)
T ss_pred EccccchhhcCcchH------------------HHHHHHHHcCcCCCCEEEEEEeeCchhcCcHHHHHHHHHHHhhC--C
Confidence 999999887764211 11122233444567889999999999999999999999986533 4
Q ss_pred cEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHH
Q 001541 508 NLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIE 586 (1057)
Q Consensus 508 ~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lE 586 (1057)
++.+ |+|+++. ...+.+.+..+++.++|.|+|. .+++..+|+.| |++|+||..|+||++++|
T Consensus 219 ~~~l~i~G~g~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a----d~~v~~s~~e~~~~~~~E 281 (360)
T cd04951 219 DIKLLIAGDGPL-----------RATLERLIKALGLSNRVKLLGL--RDDIAAYYNAA----DLFVLSSAWEGFGLVVAE 281 (360)
T ss_pred CeEEEEEcCCCc-----------HHHHHHHHHhcCCCCcEEEecc--cccHHHHHHhh----ceEEecccccCCChHHHH
Confidence 5664 7888765 3557778888888889999997 47899999999 999999999999999999
Q ss_pred HHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHH
Q 001541 587 AAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 587 AmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~ 664 (1057)
|||+|+|||+++.|+..|++.+ +|++++++|+++++++|.++++ +++.+..++.+ ++.+ +.|||+.++++|.++|
T Consensus 282 a~a~G~PvI~~~~~~~~e~i~~--~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 282 AMACELPVVATDAGGVREVVGD--SGLIVPISDPEALANKIDEILKMSGEERDIIGAR-RERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHcCCCEEEecCCChhhEecC--CceEeCCCCHHHHHHHHHHHHhCCHHHHHHHHHH-HHHHHHhcCHHHHHHHHHHHh
Confidence 9999999999999999999875 8999999999999999999995 56666666655 6666 7999999999999998
Q ss_pred H
Q 001541 665 A 665 (1057)
Q Consensus 665 ~ 665 (1057)
.
T Consensus 359 ~ 359 (360)
T cd04951 359 T 359 (360)
T ss_pred h
Confidence 6
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have |
| >PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria [] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-32 Score=298.45 Aligned_cols=242 Identities=22% Similarity=0.388 Sum_probs=180.9
Q ss_pred ceEEEEEecCCCC-Cc--chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST-TG--LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~-~~--i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
++||++|+||||. .. ......+.++ ... .+++.|+++|||++.++.+++++.+++ .||++||++|+.||+.
T Consensus 2 ~~ll~sDlD~Tl~~~~~~~~~~l~~~l~-~~~---~~~~~~v~~TGRs~~~~~~~~~~~~l~--~Pd~~I~svGt~I~~~ 75 (247)
T PF05116_consen 2 PRLLASDLDGTLIDGDDEALARLEELLE-QQA---RPEILFVYVTGRSLESVLRLLREYNLP--QPDYIITSVGTEIYYG 75 (247)
T ss_dssp SEEEEEETBTTTBHCHHHHHHHHHHHHH-HHH---CCGEEEEEE-SS-HHHHHHHHHHCT-E--E-SEEEETTTTEEEES
T ss_pred CEEEEEECCCCCcCCCHHHHHHHHHHHH-Hhh---CCCceEEEECCCCHHHHHHHHHhCCCC--CCCEEEecCCeEEEEc
Confidence 6899999999997 22 1223333333 112 368999999999999999999999984 5899999999999994
Q ss_pred cCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHH
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 930 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~ 930 (1057)
. ...+|..|..++...|..+.+++++..+++...+. ...+..||++|++........+++|+
T Consensus 76 ~------~~~~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~------------~~~q~~~k~sy~~~~~~~~~~~~~i~ 137 (247)
T PF05116_consen 76 E------NWQPDEEWQAHIDERWDRERVEEILAELPGLRPQP------------ESEQRPFKISYYVDPDDSADILEEIR 137 (247)
T ss_dssp S------TTEE-HHHHHHHHTT--HHHHHHHHHCHCCEEEGG------------CCCGCCTCECEEEETTSHCHHHHHHH
T ss_pred C------CCcChHHHHHHHHhcCChHHHHHHHHHhhCcccCC------------ccccCCeeEEEEEecccchhHHHHHH
Confidence 3 56788999999999999999998888877644433 35677899999986554444478899
Q ss_pred HHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhh
Q 001541 931 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 1010 (1057)
Q Consensus 931 ~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~ 1010 (1057)
+.+.+.+.++++++|++. ++||+|+++|||.||+||+++|+++++++++ +||++| | ++||..+..||+|+||..+.
T Consensus 138 ~~l~~~~l~~~~i~s~~~-~ldilP~~a~K~~Al~~L~~~~~~~~~~vl~-aGDSgN-D-~~mL~~~~~~vvV~Na~~e~ 213 (247)
T PF05116_consen 138 ARLRQRGLRVNVIYSNGR-DLDILPKGASKGAALRYLMERWGIPPEQVLV-AGDSGN-D-LEMLEGGDHGVVVGNAQPEL 213 (247)
T ss_dssp HHHHCCTCEEEEEECTCC-EEEEEETT-SHHHHHHHHHHHHT--GGGEEE-EESSGG-G-HHHHCCSSEEEE-TTS-HHH
T ss_pred HHHHHcCCCeeEEEccce-eEEEccCCCCHHHHHHHHHHHhCCCHHHEEE-EeCCCC-c-HHHHcCcCCEEEEcCCCHHH
Confidence 999999999999999885 9999999999999999999999999999999 899999 9 99999999999999999431
Q ss_pred hh-hhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCc
Q 001541 1011 SN-QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054 (1057)
Q Consensus 1011 ~~-~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~ 1054 (1057)
-. ...... ...-.|++....++||.++|+|||+
T Consensus 214 ~~~~~~~~~-----------~~~~iy~a~~~~a~GIlegl~~~~~ 247 (247)
T PF05116_consen 214 LSWLLEKLR-----------QQERIYFAQGPYAAGILEGLQHFGF 247 (247)
T ss_dssp HHHHHHCC------------TTE--EE-SS-THHHHHHHHHHTTT
T ss_pred HHHHHHhcc-----------cCCceEecCCCCcHHHHHHHHHcCC
Confidence 01 111111 1122456677889999999999986
|
SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B .... |
| >cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-30 Score=294.20 Aligned_cols=372 Identities=26% Similarity=0.349 Sum_probs=270.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... |..||...++..|+++|.+.| |+|++++............
T Consensus 1 kI~ii~~~~~-----------~~~~G~~~~~~~l~~~L~~~g--~~v~i~~~~~~~~~~~~~~----------------- 50 (374)
T cd03801 1 KILLVTPEYP-----------PSVGGAERHVLELARALAARG--HEVTVLTPGDGGLPDEEEV----------------- 50 (374)
T ss_pred CeeEEecccC-----------CccCcHhHHHHHHHHHHHhcC--ceEEEEecCCCCCCceeee-----------------
Confidence 5888885443 346999999999999999998 9999998864322110000
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
.......... .. . .... . ..........+.+.+ .+||+||+|++........+++
T Consensus 51 -----~~~~~~~~~~-~~-----~---~~~~-~---~~~~~~~~~~~~~~~-------~~~Dii~~~~~~~~~~~~~~~~ 105 (374)
T cd03801 51 -----GGIVVVRPPP-LL-----R---VRRL-L---LLLLLALRLRRLLRR-------ERFDVVHAHDWLALLAAALAAR 105 (374)
T ss_pred -----cCcceecCCc-cc-----c---cchh-H---HHHHHHHHHHHHhhh-------cCCcEEEEechhHHHHHHHHHH
Confidence 0000000000 00 0 0000 0 000111111122222 5799999999866555556777
Q ss_pred cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHH
Q 001541 327 ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERK 406 (1057)
Q Consensus 327 ~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~ 406 (1057)
..++|++++.|+......... ......... ..+...+..+|.+++.|....+.+...+..
T Consensus 106 ~~~~~~i~~~h~~~~~~~~~~----------~~~~~~~~~--~~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-------- 165 (374)
T cd03801 106 LLGIPLVLTVHGLEFGRPGNE----------LGLLLKLAR--ALERRALRRADRIIAVSEATREELRELGGV-------- 165 (374)
T ss_pred hcCCcEEEEeccchhhccccc----------hhHHHHHHH--HHHHHHHHhCCEEEEecHHHHHHHHhcCCC--------
Confidence 889999999999866432110 000111111 135668999999999999887776554322
Q ss_pred HHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCC
Q 001541 407 LRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 486 (1057)
Q Consensus 407 l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~ 486 (1057)
...++.++|||+|...+.+.. ...........+++.|+++|++.+
T Consensus 166 --------------~~~~~~~i~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~i~~~g~~~~ 210 (374)
T cd03801 166 --------------PPEKITVIPNGVDTERFRPAP---------------------RAARRRLGIPEDEPVILFVGRLVP 210 (374)
T ss_pred --------------CCCcEEEecCcccccccCccc---------------------hHHHhhcCCcCCCeEEEEecchhh
Confidence 113899999999998775421 001111222456789999999999
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 487 KKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
.||++.+++|+..+.... +++.+ ++|+++. ...+..++.+++...+|.|.|+++.+++..+|+.|
T Consensus 211 ~k~~~~~i~~~~~~~~~~--~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 276 (374)
T cd03801 211 RKGVDLLLEALAKLRKEY--PDVRLVIVGDGPL-----------REELEALAAELGLGDRVTFLGFVPDEDLPALYAAA- 276 (374)
T ss_pred hcCHHHHHHHHHHHhhhc--CCeEEEEEeCcHH-----------HHHHHHHHHHhCCCcceEEEeccChhhHHHHHHhc-
Confidence 999999999999987533 45665 6775543 45667777888888999999999999999999999
Q ss_pred cCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001541 566 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1057)
|++++|+..|++|++++|||++|+|||+++.++..+++.++.+|+++++.|+++++++|.+++.+++.+.+++++++
T Consensus 277 ---di~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~~~~~~~~~~~~~~~ 353 (374)
T cd03801 277 ---DVFVLPSLYEGFGLVLLEAMAAGLPVVASDVGGIPEVVEDGETGLLVPPGDPEALAEAILRLLDDPELRRRLGEAAR 353 (374)
T ss_pred ---CEEEecchhccccchHHHHHHcCCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHHHHHHHHHcChHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999988999999999999999999999999999999999999
Q ss_pred HHh-hcCCHHHHHHHHHHHHH
Q 001541 646 KNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 646 ~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+.+ +.|+|+.+++++.++|+
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~ 374 (374)
T cd03801 354 ERVAERFSWDRVAARTEEVYY 374 (374)
T ss_pred HHHHHhcCHHHHHHHHHHhhC
Confidence 777 79999999999998873
|
Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. |
| >cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-31 Score=302.47 Aligned_cols=363 Identities=23% Similarity=0.316 Sum_probs=257.9
Q ss_pred EEEEEecccccccCCcCCCCCC-CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 167 YIVLISIHGLIRGENMELGRDS-DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~-d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
||++++.+.. + ..||+++|+.+|+++|++.| |.|++++.............
T Consensus 1 ~ili~~~~~~-----------~~~~gG~~~~~~~l~~~L~~~~--~~v~~~~~~~~~~~~~~~~~--------------- 52 (365)
T cd03809 1 RILIDARFLA-----------SRRPTGIGRYARELLRALLKLD--PEEVLLLLPGAPGLLLLPLR--------------- 52 (365)
T ss_pred CEEEechhhh-----------cCCCCcHHHHHHHHHHHHHhcC--CceEEEEecCccccccccch---------------
Confidence 5777774443 4 68999999999999999999 99999988653221110000
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
..... ... ......+............ .+. ..+||+||++++.....
T Consensus 53 ------~~~~~--~~~------~~~~~~~~~~~~~~~~~~~-------~~~-------~~~~Dii~~~~~~~~~~----- 99 (365)
T cd03809 53 ------AALRL--LLR------LPRRLLWGLLFLLRAGDRL-------LLL-------LLGLDLLHSPHNTAPLL----- 99 (365)
T ss_pred ------hcccc--ccc------cccccccchhhHHHHHHHH-------Hhh-------hcCCCeeeecccccCcc-----
Confidence 00000 000 0011111111111111111 111 15699999998754443
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|+++|++.+......... ......+. .++.++..+|.+++.|+...+.+...+.. .+
T Consensus 100 ~~~~~~~i~~~hd~~~~~~~~~~~~---------~~~~~~~~--~~~~~~~~~d~~i~~s~~~~~~~~~~~~~-~~---- 163 (365)
T cd03809 100 RLRGVPVVVTIHDLIPLRFPEYFSP---------GFRRYFRR--LLRRALRRADAIITVSEATKRDLLRYLGV-PP---- 163 (365)
T ss_pred cCCCCCEEEEeccchhhhCcccCCH---------HHHHHHHH--HHHHHHHHcCEEEEccHHHHHHHHHHhCc-CH----
Confidence 5679999999999866443221110 01112222 35668999999999999888877665432 12
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.++.++|||+|...+.+.... . .......++++.|+++||+.
T Consensus 164 -----------------~~~~vi~~~~~~~~~~~~~~~------------------~---~~~~~~~~~~~~i~~~G~~~ 205 (365)
T cd03809 164 -----------------DKIVVIPLGVDPRFRPPPAEA------------------E---VLRALYLLPRPYFLYVGTIE 205 (365)
T ss_pred -----------------HHEEeeccccCccccCCCchH------------------H---HHHHhcCCCCCeEEEeCCCc
Confidence 289999999998877542110 0 12223346788999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA 565 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa 565 (1057)
+.||++.+++++..+....+...+ +++|.++... ......+.+.++..+|.|.|+++.+++..+|+.|
T Consensus 206 ~~K~~~~~l~~~~~~~~~~~~~~l-~i~G~~~~~~----------~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~- 273 (365)
T cd03809 206 PRKNLERLLEAFARLPAKGPDPKL-VIVGKRGWLN----------EELLARLRELGLGDRVRFLGYVSDEELAALYRGA- 273 (365)
T ss_pred cccCHHHHHHHHHHHHHhcCCCCE-EEecCCcccc----------HHHHHHHHHcCCCCeEEECCCCChhHHHHHHhhh-
Confidence 999999999999999754332233 4667655421 1222333667888999999999999999999999
Q ss_pred cCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH
Q 001541 566 KTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 566 ~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~ 645 (1057)
|++++||..|+||++++||||+|+|||+++.|+..|++. .+|+++++.|.++++++|.+++++++.+.+++++++
T Consensus 274 ---d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~~--~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~ 348 (365)
T cd03809 274 ---RAFVFPSLYEGFGLPVLEAMACGTPVIASNISSLPEVAG--DAALYFDPLDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred ---hhhcccchhccCCCCHHHHhcCCCcEEecCCCCccceec--CceeeeCCCCHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999874 579999999999999999999999999999999999
Q ss_pred HHhhcCCHHHHHHHHH
Q 001541 646 KNIHLFSWPEHCKTYL 661 (1057)
Q Consensus 646 ~~v~~fsw~~~a~~~l 661 (1057)
+.+++|+|+.++++|+
T Consensus 349 ~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 349 ARAKRFSWEKTARRTL 364 (365)
T ss_pred HHHHhCCHHHHHHHHh
Confidence 8789999999999886
|
mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide. |
| >cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-30 Score=296.76 Aligned_cols=356 Identities=21% Similarity=0.239 Sum_probs=250.6
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+... |..||.++++.+|+++|++.| |+|++++.....+....
T Consensus 1 kI~~v~~~~------------~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~------------------- 47 (366)
T cd03822 1 RIALVSPYP------------PRKCGIATFTTDLVNALSARG--PDVLVVSVAALYPSLLY------------------- 47 (366)
T ss_pred CeEEecCCC------------CCCCcHHHHHHHHHHHhhhcC--CeEEEEEeecccCcccC-------------------
Confidence 688997432 568999999999999999999 99999986542211100
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC---chHH---
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD---AGDS--- 320 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~---~~~~--- 320 (1057)
........... . .. + .....+... +.. .+||+||++.+. ....
T Consensus 48 -~~~~~~~~~~~-~----------~~--~---~~~~~~~~~-------~~~-------~~~dii~~~~~~~~~~~~~~~~ 96 (366)
T cd03822 48 -GGEQEVVRVIV-L----------DN--P---LDYRRAARA-------IRL-------SGPDVVVIQHEYGIFGGEAGLY 96 (366)
T ss_pred -CCcccceeeee-c----------CC--c---hhHHHHHHH-------Hhh-------cCCCEEEEeeccccccchhhHH
Confidence 00000111110 0 00 0 001111111 111 579999998731 1222
Q ss_pred HHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 321 AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 321 a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
...+.+..++|+|++.|+...... . . ...+ .++..++.+|.|+++|.....+......
T Consensus 97 ~~~~~~~~~~~~i~~~h~~~~~~~----------~----~---~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~--- 154 (366)
T cd03822 97 LLLLLRGLGIPVVVTLHTVLLHEP----------R----P---GDRA--LLRLLLRRADAVIVMSSELLRALLLRAY--- 154 (366)
T ss_pred HHHHHhhcCCCEEEEEecCCcccc----------c----h---hhhH--HHHHHHhcCCEEEEeeHHHHHHHHhhcC---
Confidence 222234579999999999721110 0 0 0011 2345688999999997444443322111
Q ss_pred hHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEE
Q 001541 401 PVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480 (1057)
Q Consensus 401 ~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 480 (1057)
..++.+||||++...+.+... ........++++|++
T Consensus 155 ---------------------~~~~~~i~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~ 190 (366)
T cd03822 155 ---------------------PEKIAVIPHGVPDPPAEPPES-----------------------LKALGGLDGRPVLLT 190 (366)
T ss_pred ---------------------CCcEEEeCCCCcCcccCCchh-----------------------hHhhcCCCCCeEEEE
Confidence 128999999999876653210 012223456789999
Q ss_pred EeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC-CCCCcHH
Q 001541 481 LARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH-HKQSDVP 558 (1057)
Q Consensus 481 vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~-v~~~dl~ 558 (1057)
+||+.+.||++.+++|+..+... .+++.+ |+|++....... .....+++.++++.++|.|.|. ++.+++.
T Consensus 191 ~G~~~~~K~~~~ll~a~~~~~~~--~~~~~l~i~G~~~~~~~~~------~~~~~~~i~~~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 191 FGLLRPYKGLELLLEALPLLVAK--HPDVRLLVAGETHPDLERY------RGEAYALAERLGLADRVIFINRYLPDEELP 262 (366)
T ss_pred EeeccCCCCHHHHHHHHHHHHhh--CCCeEEEEeccCccchhhh------hhhhHhHHHhcCCCCcEEEecCcCCHHHHH
Confidence 99999999999999999998753 345564 778765422110 1111145788899999999987 9999999
Q ss_pred HHHHHhhcCCcEEEEcCCCC--CCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHH
Q 001541 559 EIYRLAAKTKGVFINPAFIE--PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 636 (1057)
Q Consensus 559 ~ly~~Aa~~~dv~v~ps~~E--gfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~ 636 (1057)
.+|+.| |++++|+..| +||++++||||||+|||+++.|+ .+.+.+..+|+++++.|+++++++|.+++++++.
T Consensus 263 ~~~~~a----d~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~~~~~~l~~l~~~~~~ 337 (366)
T cd03822 263 ELFSAA----DVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVLDGGTGLLVPPGDPAALAEAIRRLLADPEL 337 (366)
T ss_pred HHHhhc----CEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheeeeCCCcEEEcCCCHHHHHHHHHHHHcChHH
Confidence 999999 9999999999 99999999999999999999999 6777778899999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 637 WARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 637 ~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
+.++++++++.++.|||+.++++|.++|+
T Consensus 338 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 366 (366)
T cd03822 338 AQALRARAREYARAMSWERVAERYLRLLA 366 (366)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHhC
Confidence 99999999999977999999999999873
|
ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides. |
| >cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-30 Score=292.70 Aligned_cols=344 Identities=23% Similarity=0.306 Sum_probs=251.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++++.... + .||.++++.+|+++|.+.| |+|++++..... ...+
T Consensus 1 kI~i~~~~~~-----------~-~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~---~~~~----------------- 46 (348)
T cd03820 1 KILFVIPSLG-----------N-AGGAERVLSNLANALAEKG--HEVTIISLDKGE---PPFY----------------- 46 (348)
T ss_pred CeEEEecccc-----------C-CCChHHHHHHHHHHHHhCC--CeEEEEecCCCC---CCcc-----------------
Confidence 5788874332 3 8999999999999999998 999999886432 0000
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG 326 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~ 326 (1057)
...+++.+..++..... ..+..+ .+...+ .+.+.+ .+||+||++.+..... ....
T Consensus 47 --~~~~~~~~~~~~~~~~~------~~~~~~-~~~~~~-------~~~l~~-------~~~d~i~~~~~~~~~~--~~~~ 101 (348)
T cd03820 47 --ELDPKIKVIDLGDKRDS------KLLARF-KKLRRL-------RKLLKN-------NKPDVVISFLTSLLTF--LASL 101 (348)
T ss_pred --ccCCccceeeccccccc------chhccc-cchHHH-------HHhhcc-------cCCCEEEEcCchHHHH--HHHH
Confidence 11235566655543220 000000 001111 111111 5799999998752122 2222
Q ss_pred cCC-CCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 327 ALN-VPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 327 ~~~-iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
..+ +|++++.|+......... .....++..++.+|.+++.|+........
T Consensus 102 ~~~~~~~i~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~d~ii~~s~~~~~~~~~----------- 152 (348)
T cd03820 102 GLKIVKLIVSEHNSPDAYKKRL------------------RRLLLRRLLYRRADAVVVLTEEDRALYYK----------- 152 (348)
T ss_pred hhccccEEEecCCCccchhhhh------------------HHHHHHHHHHhcCCEEEEeCHHHHHHhhc-----------
Confidence 234 599999998754332110 00003566899999999999886522111
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
.+..++.++|||++...+.+. ...+++.|+++|++.
T Consensus 153 --------------~~~~~~~vi~~~~~~~~~~~~------------------------------~~~~~~~i~~~g~~~ 188 (348)
T cd03820 153 --------------KFNKNVVVIPNPLPFPPEEPS------------------------------SDLKSKRILAVGRLV 188 (348)
T ss_pred --------------cCCCCeEEecCCcChhhcccc------------------------------CCCCCcEEEEEEeec
Confidence 112389999999998766432 124578999999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
+.||++.+++|+..+.+ ..+++.+ ++|.+++ ...+.+++.++++.++|.|.|. .+++..+|+.|
T Consensus 189 ~~K~~~~l~~~~~~l~~--~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a 253 (348)
T cd03820 189 PQKGFDLLIEAWAKIAK--KHPDWKLRIVGDGPE-----------REALEALIKELGLEDRVILLGF--TKNIEEYYAKA 253 (348)
T ss_pred cccCHHHHHHHHHHHHh--cCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCCeEEEcCC--cchHHHHHHhC
Confidence 99999999999999965 3455554 7787765 3456667888999999999998 78999999999
Q ss_pred hcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 565 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G-g~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
|++|+||..|+||++++|||+||+|||+++.+ +..+++.++.+|+++++.|+++++++|.+++++++.+++++++
T Consensus 254 ----d~~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ll~~~~~~~~~~~~ 329 (348)
T cd03820 254 ----SIFVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLRLMEDEELRKRMGAN 329 (348)
T ss_pred ----CEEEeCccccccCHHHHHHHHcCCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHHHHcCHHHHHHHHHH
Confidence 99999999999999999999999999999964 5677777777999999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHH
Q 001541 644 GLKNIHLFSWPEHCKTYL 661 (1057)
Q Consensus 644 ~~~~v~~fsw~~~a~~~l 661 (1057)
+++.+++|+|+.++++|.
T Consensus 330 ~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 330 ARESAERFSIENIIKQWE 347 (348)
T ss_pred HHHHHHHhCHHHHHHHhc
Confidence 987779999999999885
|
AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran. |
| >TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-31 Score=310.27 Aligned_cols=284 Identities=19% Similarity=0.195 Sum_probs=207.6
Q ss_pred CcceEEEEcCCCchHHHHHHH-hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHH--HHHHHHHHHhhcCCEE
Q 001541 305 VWPVAIHGHYADAGDSAALLS-GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIM--RRIEAEELSLDASEIV 381 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~-~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~--~ri~~E~~~l~~ad~V 381 (1057)
.++|+||+++...+.. +. ...++|+|++.|++....+.+......... ...|++. .....|+.+++.+|.|
T Consensus 103 ~~~D~v~~~~~~~~~~---~~~~~~~~p~i~~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~e~~~~~~ad~v 176 (397)
T TIGR03087 103 EPVDAIVVFSSAMAQY---VTPHVRGVPRIVDFVDVDSDKWLQYARTKRWPL---RWIYRREGRLLLAYERAIAARFDAA 176 (397)
T ss_pred CCCCEEEEecccccee---ccccccCCCeEeehhhHHHHHHHHHHhccCcch---hHHHHHHHHHHHHHHHHHHhhCCeE
Confidence 5699999987533222 22 345899999999986655444322211111 1222211 1122588899999999
Q ss_pred EecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCc
Q 001541 382 ITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 461 (1057)
Q Consensus 382 i~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~ 461 (1057)
+++|+.+.+.+...+.. ...++.+||||+|.+.|.+..... .
T Consensus 177 i~~S~~~~~~l~~~~~~----------------------~~~~v~vipngvd~~~f~~~~~~~--------------~-- 218 (397)
T TIGR03087 177 TFVSRAEAELFRRLAPE----------------------AAGRITAFPNGVDADFFSPDRDYP--------------N-- 218 (397)
T ss_pred EEcCHHHHHHHHHhCCC----------------------CCCCeEEeecccchhhcCCCcccc--------------C--
Confidence 99999888776443221 123799999999999887532110 0
Q ss_pred hHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHH----HHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHH
Q 001541 462 IWSEIMRFFTNPRKPVILALARPDPKKNITTLVK----AFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~----A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
. ..+++++|+|+||+++.||++.++. ++..+.+ ..+++.+ |+|+++. ..
T Consensus 219 ------~--~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~--~~p~~~l~ivG~g~~------------~~---- 272 (397)
T TIGR03087 219 ------P--YPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRA--RRPAAEFYIVGAKPS------------PA---- 272 (397)
T ss_pred ------C--CCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHH--HCCCcEEEEECCCCh------------HH----
Confidence 0 1245689999999999999999984 4444543 2355664 7888763 11
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEe
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 615 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 615 (1057)
+.++...++|.|.|+++ ++..+|+.| |++|+||. .||+|++++||||||+|||+|+.|+. .+....++|+++
T Consensus 273 ~~~l~~~~~V~~~G~v~--~~~~~~~~a----dv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~-~i~~~~~~g~lv 345 (397)
T TIGR03087 273 VRALAALPGVTVTGSVA--DVRPYLAHA----AVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAE-GIDALPGAELLV 345 (397)
T ss_pred HHHhccCCCeEEeeecC--CHHHHHHhC----CEEEecccccCCcccHHHHHHHcCCCEEecCcccc-cccccCCcceEe
Confidence 22334456799999985 799999999 99999996 69999999999999999999997643 333345678988
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHc
Q 001541 616 DPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~ 666 (1057)
. .|+++++++|.++++|+++++++++++++.+ ++|||+.+++++.++|..
T Consensus 346 ~-~~~~~la~ai~~ll~~~~~~~~~~~~ar~~v~~~fsw~~~~~~~~~~l~~ 396 (397)
T TIGR03087 346 A-ADPADFAAAILALLANPAEREELGQAARRRVLQHYHWPRNLARLDALLEQ 396 (397)
T ss_pred C-CCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhcC
Confidence 6 8999999999999999999999999999999 699999999999999864
|
Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate. |
| >cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=5e-31 Score=303.08 Aligned_cols=345 Identities=21% Similarity=0.198 Sum_probs=245.7
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++++.. +..||.++++..++++|.++| |+|++++...
T Consensus 1 MkIl~~~~~-------------~~~gG~~~~~~~l~~~l~~~G--~~v~v~~~~~------------------------- 40 (365)
T cd03825 1 MKVLHLNTS-------------DISGGAARAAYRLHRALQAAG--VDSTMLVQEK------------------------- 40 (365)
T ss_pred CeEEEEecC-------------CCCCcHHHHHHHHHHHHHhcC--CceeEEEeec-------------------------
Confidence 799999732 236899999999999999999 9999997642
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
. . +...+ ...+|||||+|+...+.+.....
T Consensus 41 -------~----------~-------------------~~~~~--------------~~~~~diih~~~~~~~~~~~~~~ 70 (365)
T cd03825 41 -------K----------A-------------------LISKI--------------EIINADIVHLHWIHGGFLSIEDL 70 (365)
T ss_pred -------c----------h-------------------hhhCh--------------hcccCCEEEEEccccCccCHHHH
Confidence 0 0 00000 01569999999864433333322
Q ss_pred hc--CCCCEEEEecCCchhhHHHHHHh---------hhc--c--hHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHH
Q 001541 326 GA--LNVPMLFTGHSLGRDKLEQLLKQ---------ARL--S--RDEINATYKIMRRIEAEELSLDASEIVITSTRQEIE 390 (1057)
Q Consensus 326 ~~--~~iP~V~t~H~l~~~~~~~l~~~---------g~~--~--~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~ 390 (1057)
.. .++|+|+|.|+.+.......... +.. . ...........++. .......++.++++|+...+
T Consensus 71 ~~~~~~~~~v~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~s~~~~~ 148 (365)
T cd03825 71 SKLLDRKPVVWTLHDMWPFTGGCHYPGGCDRYKTECGNCPQLGSYPEKDLSRWIWRRK--RKAWADLNLTIVAPSRWLAD 148 (365)
T ss_pred HHHHcCCCEEEEcccCcccccccCCccccccccccCCCCCCCCCCCcccHHHHHHHHH--HHHhccCCcEEEehhHHHHH
Confidence 22 39999999998754321100000 000 0 00000011111111 11223567788888877655
Q ss_pred HHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhh
Q 001541 391 EQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF 470 (1057)
Q Consensus 391 ~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 470 (1057)
.+...+. .+..++.|||||+|.+.|.+... ......+.
T Consensus 149 ~~~~~~~----------------------~~~~~~~vi~ngi~~~~~~~~~~--------------------~~~~~~~~ 186 (365)
T cd03825 149 CARSSSL----------------------FKGIPIEVIPNGIDTTIFRPRDK--------------------REARKRLG 186 (365)
T ss_pred HHHhccc----------------------cCCCceEEeCCCCcccccCCCcH--------------------HHHHHHhC
Confidence 5433221 11238999999999988764321 11223344
Q ss_pred CCCCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE
Q 001541 471 TNPRKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~ 547 (1057)
.+++++++++.|+... .||++.+++|+..+... ..+++.+ ++|+++... ..++..+|.
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~-~~~~~~~~i~G~~~~~~------------------~~~~~~~v~ 247 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDELIEALKRLAER-WKDDIELVVFGASDPEI------------------PPDLPFPVH 247 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhc-cCCCeEEEEeCCCchhh------------------hccCCCceE
Confidence 4556677777777765 89999999999988642 2356665 667765311 014556899
Q ss_pred eCCCCC-CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHH
Q 001541 548 YPKHHK-QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADA 626 (1057)
Q Consensus 548 f~g~v~-~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~a 626 (1057)
|+|+++ .+++..+|+.| |++++||..|+||++++|||+||+|||+++.||..|++.++.+|+++++.|+++++++
T Consensus 248 ~~g~~~~~~~~~~~~~~a----d~~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~ 323 (365)
T cd03825 248 YLGSLNDDESLALIYSAA----DVFVVPSLQENFPNTAIEALACGTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEG 323 (365)
T ss_pred ecCCcCCHHHHHHHHHhC----CEEEeccccccccHHHHHHHhcCCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHH
Confidence 999998 67899999999 9999999999999999999999999999999999999999889999999999999999
Q ss_pred HHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 627 LLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 627 I~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
|.+++++++.+.++++++++.+ ++|||+.++++|+++|+++
T Consensus 324 l~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y~~~ 365 (365)
T cd03825 324 IEWLLADPDEREELGEAARELAENEFDSRVQAKRYLSLYEEL 365 (365)
T ss_pred HHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999 6899999999999999863
|
wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis. |
| >PRK10125 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-30 Score=304.77 Aligned_cols=367 Identities=13% Similarity=0.146 Sum_probs=228.5
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++|.. ++ ..||+++.+.+|++.|.+.| |+|.++......+....
T Consensus 1 mkil~i~~-~l------------~~GGaeri~~~L~~~l~~~G--~~~~i~~~~~~~~~~~~------------------ 47 (405)
T PRK10125 1 MNILQFNV-RL------------AEGGAAGVALDLHQRALQQG--LASHFVYGYGKGGKESV------------------ 47 (405)
T ss_pred CeEEEEEe-ee------------cCCchhHHHHHHHHHHHhcC--CeEEEEEecCCCccccc------------------
Confidence 89999974 22 37999999999999999999 99999877543222100
Q ss_pred cccCCCCCe-EEEEccCCCcccccccccCCCChh--HHHH-HHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch---
Q 001541 246 DDMGESSGA-YIIRIPFGPKDKYIAKELLWPHIP--EFVD-GALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG--- 318 (1057)
Q Consensus 246 ~~~~~~~gv-~i~rip~~p~~~~l~k~~l~~~l~--~f~~-~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~--- 318 (1057)
....+ .++.+ +++ .... -++. .+.+ ..+..+....+.+.+ ..+|||||.|....+
T Consensus 48 ----~~~~~~~~~~~--~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~i~~------~~~pDviHlH~~~~~~~~ 109 (405)
T PRK10125 48 ----SHQNYPQVIKH--TPR--MTAM----ANIALFRLFNRDLFGNFNELYRTITR------TPGPVVLHFHVLHSYWLN 109 (405)
T ss_pred ----ccCCcceEEEe--ccc--HHHH----HHHHHHHhcchhhcchHHHHHHHHhh------ccCCCEEEEecccCceec
Confidence 00111 11111 111 0000 0000 0000 000111111112211 267999999976442
Q ss_pred HH--HHH----HHhcCCCCEEEEecCCchhh-----------HHHHHHhh-h---cchHHHHHHHHH-HHHHHHHHHHhh
Q 001541 319 DS--AAL----LSGALNVPMLFTGHSLGRDK-----------LEQLLKQA-R---LSRDEINATYKI-MRRIEAEELSLD 376 (1057)
Q Consensus 319 ~~--a~~----l~~~~~iP~V~t~H~l~~~~-----------~~~l~~~g-~---~~~~~~~~~yk~-~~ri~~E~~~l~ 376 (1057)
.. ..+ ..+..++|+|+|.|+.+... +..-.... . .+........+. .++...-..+++
T Consensus 110 ~~~l~~~~~~~~~~~~~~piV~TlHd~~~~tg~c~~~~~C~~~~~~c~~Cp~l~~~~~~~~d~~~~~~~~k~~~~~~~~~ 189 (405)
T PRK10125 110 LKSVVRFCEKVKNHKPDVTLVWTLHDHWSVTGRCAFTDGCEGWKTGCQKCPTLNNYPPVKVDRAHQLVAGKRQLFREMLA 189 (405)
T ss_pred HHHHHHHHhhhhcccCCCCEEEecccccccCCCcCCCcccccccccCCCCCCccCCCCCccchHHHHHHHHHHHHHHHhh
Confidence 21 111 12345899999999987431 11000000 0 000001111111 111111122345
Q ss_pred cCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCC
Q 001541 377 ASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPA 456 (1057)
Q Consensus 377 ~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~ 456 (1057)
.++.+|++|+...+.+...+.. .++.|||||||++.+.+.....
T Consensus 190 ~~~~iV~~S~~l~~~~~~~~~~------------------------~~i~vI~NGid~~~~~~~~~~~------------ 233 (405)
T PRK10125 190 LGCQFISPSQHVADAFNSLYGP------------------------GRCRIINNGIDMATEAILAELP------------ 233 (405)
T ss_pred cCcEEEEcCHHHHHHHHHHcCC------------------------CCEEEeCCCcCccccccccccc------------
Confidence 6789999999877765433321 2899999999975432211000
Q ss_pred CCCCchHHHHHhhhCCCCCcEEEEEeC-C-CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHH
Q 001541 457 SPDPPIWSEIMRFFTNPRKPVILALAR-P-DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSV 533 (1057)
Q Consensus 457 ~~~~~~~~~~~~~~~~~~~~~Il~vGR-l-~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l 533 (1057)
. ....+++++|+++|+ + .+.||++.+++|+..+. +++.| ++|+++...
T Consensus 234 -~----------~~~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l~-----~~~~L~ivG~g~~~~------------- 284 (405)
T PRK10125 234 -P----------VRETQGKPKIAVVAHDLRYDGKTDQQLVREMMALG-----DKIELHTFGKFSPFT------------- 284 (405)
T ss_pred -c----------cccCCCCCEEEEEEeccccCCccHHHHHHHHHhCC-----CCeEEEEEcCCCccc-------------
Confidence 0 001256789999999 3 47899999999999873 24554 778764310
Q ss_pred HHHHHHcCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCce
Q 001541 534 LKLIDKYDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNG 612 (1057)
Q Consensus 534 ~~l~~~~~l~~~V~f~g~v-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~G 612 (1057)
..+|.++|+. +..++.++|+.| |+||+||..|+||++++||||||+|||+|+.||++|++.+. +|
T Consensus 285 ---------~~~v~~~g~~~~~~~l~~~y~~a----DvfV~pS~~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~~-~G 350 (405)
T PRK10125 285 ---------AGNVVNHGFETDKRKLMSALNQM----DALVFSSRVDNYPLILCEALSIGVPVIATHSDAAREVLQKS-GG 350 (405)
T ss_pred ---------ccceEEecCcCCHHHHHHHHHhC----CEEEECCccccCcCHHHHHHHcCCCEEEeCCCChHHhEeCC-cE
Confidence 1357888876 446899999999 99999999999999999999999999999999999999764 89
Q ss_pred EEeCCCCHHHHHHHHHHHHhCHHHHHH----HHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 613 LLVDPHDQQSVADALLKLVADKQLWAR----CRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 613 llv~p~d~~~la~aI~~ll~d~~~~~~----~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++|+|.|+++|++++ ++...++ +..++++.+ +.|||+.++++|+++|+++
T Consensus 351 ~lv~~~d~~~La~~~-----~~~~~~~~~~~~~~~~r~~~~~~fs~~~~~~~y~~lY~~l 405 (405)
T PRK10125 351 KTVSEEEVLQLAQLS-----KPEIAQAVFGTTLAEFSQRSRAAYSGQQMLEEYVNFYQNL 405 (405)
T ss_pred EEECCCCHHHHHhcc-----CHHHHHHhhhhHHHHHHHHHHHhCCHHHHHHHHHHHHHhC
Confidence 999999999999864 3333332 234577777 6899999999999999753
|
|
| >cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.98 E-value=1e-29 Score=288.17 Aligned_cols=347 Identities=26% Similarity=0.329 Sum_probs=256.1
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 269 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~ 269 (1057)
.||.+.++..|+++|.+.| |+|++++....... .....++.++.++..... .
T Consensus 9 ~~g~~~~~~~l~~~L~~~g--~~v~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~--~- 60 (359)
T cd03808 9 DGGLYSFRLPLIKALRAAG--YEVHVVAPPGDELE-----------------------ELEALGVKVIPIPLDRRG--I- 60 (359)
T ss_pred chhHHHHHHHHHHHHHhcC--CeeEEEecCCCccc-----------------------ccccCCceEEeccccccc--c-
Confidence 6799999999999999999 99999987642111 011246777777654310 0
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHh-cCCCCEEEEecCCchhhHHHHH
Q 001541 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSG-ALNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 270 k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
..+.. +..+..+.+.+.+ .+||+||+|.......+.+.++ ..+.+++++.|+..........
T Consensus 61 --~~~~~--------~~~~~~~~~~~~~-------~~~dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 123 (359)
T cd03808 61 --NPFKD--------LKALLRLYRLLRK-------ERPDIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGL 123 (359)
T ss_pred --ChHhH--------HHHHHHHHHHHHh-------cCCCEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchh
Confidence 00111 1111222223332 5799999998766666666655 4567788888887543321100
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
..++... .++..+..+|.+++.|+...+.+...+... ...++.++
T Consensus 124 ------------~~~~~~~--~~~~~~~~~d~ii~~s~~~~~~~~~~~~~~---------------------~~~~~~~~ 168 (359)
T cd03808 124 ------------KRRLYLL--LERLALRFTDKVIFQNEDDRDLALKLGIIK---------------------KKKTVLIP 168 (359)
T ss_pred ------------HHHHHHH--HHHHHHhhccEEEEcCHHHHHHHHHhcCCC---------------------cCceEEec
Confidence 1112222 256778899999999998777654432110 01277889
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCc
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELAN 508 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~ 508 (1057)
|+|+|...+.+.... ..++.+.|+++||+.+.||++.+++++..+.. ..++
T Consensus 169 ~~~~~~~~~~~~~~~---------------------------~~~~~~~i~~~G~~~~~k~~~~li~~~~~l~~--~~~~ 219 (359)
T cd03808 169 GSGVDLDRFSPSPEP---------------------------IPEDDPVFLFVARLLKDKGIDELLEAARILKA--KGPN 219 (359)
T ss_pred CCCCChhhcCccccc---------------------------cCCCCcEEEEEeccccccCHHHHHHHHHHHHh--cCCC
Confidence 999998877643210 13567899999999999999999999999864 2345
Q ss_pred EEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHH
Q 001541 509 LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1057)
Q Consensus 509 l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEA 587 (1057)
+.+ |+|.++..... ... ++..++...+|.|.|+ .+++..+|+.| |++|+|+..|+||++++||
T Consensus 220 ~~l~i~G~~~~~~~~--------~~~--~~~~~~~~~~v~~~g~--~~~~~~~~~~a----di~i~ps~~e~~~~~~~Ea 283 (359)
T cd03808 220 VRLLLVGDGDEENPA--------AIL--EIEKLGLEGRVEFLGF--RDDVPELLAAA----DVFVLPSYREGLPRVLLEA 283 (359)
T ss_pred eEEEEEcCCCcchhh--------HHH--HHHhcCCcceEEEeec--cccHHHHHHhc----cEEEecCcccCcchHHHHH
Confidence 665 77877653221 111 3667777889999998 68999999999 9999999999999999999
Q ss_pred HHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 001541 588 AAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 588 mA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l 661 (1057)
|+||+|||+|+.++..+++.++.+|++++++|+++++++|.+++.+++.+.++++++++.+ ++|||+.++++|+
T Consensus 284 ~~~G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 284 MAMGRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADAIERLIEDPELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHcCCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9999999999999999999989999999999999999999999999999999999999997 7999999999886
|
cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides. |
| >cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.1e-29 Score=289.56 Aligned_cols=355 Identities=21% Similarity=0.252 Sum_probs=245.3
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
||++|+.... +..+||.++++.+|+++|++.| |+|++++.......... .
T Consensus 1 kIl~i~~~~~----------~~~~gG~~~~~~~l~~~L~~~g--~~v~v~~~~~~~~~~~~--~---------------- 50 (359)
T cd03823 1 RILVVNHLYP----------PRSVGGAEVVAHDLAEALAKRG--HEVAVLTAGEDPPRQDK--E---------------- 50 (359)
T ss_pred CeeEEcccCC----------cccccchHHHHHHHHHHHHhcC--CceEEEeCCCCCCCccc--c----------------
Confidence 5889984443 1346999999999999999999 99999987642211100 0
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC-chHHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD-AGDSAALLS 325 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~-~~~~a~~l~ 325 (1057)
.....+...+.............+.....+.... ...+.+.+.+ .+||+||+|... .+......+
T Consensus 51 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-------~~~dii~~~~~~~~~~~~~~~~ 116 (359)
T cd03823 51 ----VIGVVVYGRPIDEVLRSALPRDLFHLSDYDNPAV---VAEFARLLED-------FRPDVVHFHHLQGLGVSILRAA 116 (359)
T ss_pred ----cccceeeccccccccCCCchhhhhHHHhccCHHH---HHHHHHHHHH-------cCCCEEEECCccchHHHHHHHH
Confidence 0111121111000000000000000000000011 1111122222 569999999863 233334455
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|++.|+.+...... .......|.++++|+...+.+.....
T Consensus 117 ~~~~~~~i~~~hd~~~~~~~~-------------------------~~~~~~~d~ii~~s~~~~~~~~~~~~-------- 163 (359)
T cd03823 117 RDRGIPIVLTLHDYWLICPRQ-------------------------GLFKKGGDAVIAPSRFLLDRYVANGL-------- 163 (359)
T ss_pred HhcCCCEEEEEeeeeeecchh-------------------------hhhccCCCEEEEeCHHHHHHHHHcCC--------
Confidence 667899999999875422100 00122339999999887666543211
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
...++.+||||+|...+.+... ....++++|+++||+.
T Consensus 164 ---------------~~~~~~vi~n~~~~~~~~~~~~---------------------------~~~~~~~~i~~~G~~~ 201 (359)
T cd03823 164 ---------------FAEKISVIRNGIDLDRAKRPRR---------------------------APPGGRLRFGFIGQLT 201 (359)
T ss_pred ---------------CccceEEecCCcChhhcccccc---------------------------CCCCCceEEEEEecCc
Confidence 1238999999999987754221 0135678899999999
Q ss_pred CCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
+.||++.+++|+..+.+ +++.+ ++|.++.... ..... +...+|.|.|+++.+++..+|+.|
T Consensus 202 ~~k~~~~li~~~~~l~~----~~~~l~i~G~~~~~~~-----------~~~~~---~~~~~v~~~g~~~~~~~~~~~~~a 263 (359)
T cd03823 202 PHKGVDLLLEAFKRLPR----GDIELVIVGNGLELEE-----------ESYEL---EGDPRVEFLGAYPQEEIDDFYAEI 263 (359)
T ss_pred cccCHHHHHHHHHHHHh----cCcEEEEEcCchhhhH-----------HHHhh---cCCCeEEEeCCCCHHHHHHHHHhC
Confidence 99999999999999864 45554 7787764221 11111 556789999999999999999999
Q ss_pred hcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 565 AKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 565 a~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
|++++||. .|+||++++||||||+|||+|+.|+..|++.++.+|+++++.|.++++++|.+++++++.++.++++
T Consensus 264 ----d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~~~~~~~~~~ 339 (359)
T cd03823 264 ----DVLVVPSIWPENFPLVIREALAAGVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAAALERLIDDPDLLERLRAG 339 (359)
T ss_pred ----CEEEEcCcccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHHHHHHHHhChHHHHHHHHh
Confidence 99999997 7999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred HHHHhhcCCHHHHHHHHHHHHH
Q 001541 644 GLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 644 ~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
+++.... +.++++|+++|+
T Consensus 340 ~~~~~~~---~~~~~~~~~~~~ 358 (359)
T cd03823 340 IEPPRSI---EDQAEEYLKLYR 358 (359)
T ss_pred HHHhhhH---HHHHHHHHHHhh
Confidence 8887644 889999999886
|
ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II). |
| >cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.5e-29 Score=288.03 Aligned_cols=283 Identities=30% Similarity=0.435 Sum_probs=228.2
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|+. .....+..+++..++|++++.|+......... .+.+. .++..+..+|.+++
T Consensus 92 ~~~dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---------------~~~~~--~~~~~~~~~d~ii~ 154 (377)
T cd03798 92 FRPDLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRK---------------RLLRA--LLRRALRRADAVIA 154 (377)
T ss_pred CCCCEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCch---------------hhHHH--HHHHHHhcCCeEEe
Confidence 57999999975 45566677778889999999999865432110 01111 24567899999999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
.|+...+.+...+ .+..++.++|||+|...+.+.....
T Consensus 155 ~s~~~~~~~~~~~-----------------------~~~~~~~~i~~~~~~~~~~~~~~~~------------------- 192 (377)
T cd03798 155 VSEALADELKALG-----------------------IDPEKVTVIPNGVDTERFSPADRAE------------------- 192 (377)
T ss_pred CCHHHHHHHHHhc-----------------------CCCCceEEcCCCcCcccCCCcchHH-------------------
Confidence 9998777665432 1123899999999998876532110
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
. .+.....+++.|+++|++.+.||++.+++++..+... .+++.+ ++|.++. ...+.++++++++
T Consensus 193 ~--~~~~~~~~~~~i~~~g~~~~~k~~~~li~~~~~~~~~--~~~~~l~i~g~~~~-----------~~~~~~~~~~~~~ 257 (377)
T cd03798 193 A--RKLGLPEDKKVILFVGRLVPRKGIDYLIEALARLLKK--RPDVHLVIVGDGPL-----------REALEALAAELGL 257 (377)
T ss_pred H--HhccCCCCceEEEEeccCccccCHHHHHHHHHHHHhc--CCCeEEEEEcCCcc-----------hHHHHHHHHhcCC
Confidence 0 1122245678999999999999999999999998653 456665 6677654 3456677778888
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHH
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.++|.+.|+++.+++..+|+.| |++++|+..|++|++++|||++|+|||+++.|+..+++.++.+|++++++|+++
T Consensus 258 ~~~v~~~g~~~~~~~~~~~~~a----d~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~ 333 (377)
T cd03798 258 EDRVTFLGAVPHEEVPAYYAAA----DVFVLPSLREGFGLVLLEAMACGLPVVATDVGGIPEIITDGENGLLVPPGDPEA 333 (377)
T ss_pred cceEEEeCCCCHHHHHHHHHhc----CeeecchhhccCChHHHHHHhcCCCEEEecCCChHHHhcCCcceeEECCCCHHH
Confidence 8999999999999999999999 999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHcc
Q 001541 623 VADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~ 667 (1057)
++++|.+++++++. ++..++++.+ +.|+|+.+++++.++|+++
T Consensus 334 l~~~i~~~~~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~~l 377 (377)
T cd03798 334 LAEAILRLLADPWL--RLGRAARRRVAERFSWENVAERLLELYREV 377 (377)
T ss_pred HHHHHHHHhcCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHhhC
Confidence 99999999999887 6777788877 7999999999999998753
|
wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS. |
| >PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2 | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-31 Score=297.16 Aligned_cols=248 Identities=35% Similarity=0.525 Sum_probs=175.5
Q ss_pred CcceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCC-------C---eeeEEEEecCCCCCCCCCccCCc
Q 001541 163 GKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMP-------G---VYRVDLLTRQVSAPDVDWSYGEP 232 (1057)
Q Consensus 163 ~~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~G-------g---v~~V~vit~~~~~~~~~~~y~~~ 232 (1057)
+|-.+|++||+||+++++|| +|| ||||||++||+++|++|.+.+ | .-+|.++|+.+.+.. .....++
T Consensus 270 Pmvf~vvliSpHG~f~q~nv-LG~-pDTGGQVvYVleqarALe~e~~~ri~~~gl~i~p~i~i~TRlIpd~~-~t~~~q~ 346 (550)
T PF00862_consen 270 PMVFNVVLISPHGYFGQENV-LGR-PDTGGQVVYVLEQARALENEMLYRIKLQGLDITPKIDIVTRLIPDAK-GTTCNQR 346 (550)
T ss_dssp ---SEEEEE--SS--STTST-TSS-TTSSHHHHHHHHHHHHHHHHTHHHHHHTT-----EEEEEEE--TBTT-CGGGTSS
T ss_pred ceeEEEEEEcCccccccccc-cCC-CCCCCcEEEEeHHHHHHHHHHHHHHHhcCCCCCCceeeecccccCCc-CCCcccc
Confidence 34568999999999999999 999 999999999999999998742 1 136999999884322 2333444
Q ss_pred ccccCCCCCCccccccCCCCCeEEEEccCCCc----ccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcce
Q 001541 233 TEMLTPRNSDDFMDDMGESSGAYIIRIPFGPK----DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPV 308 (1057)
Q Consensus 233 ~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~----~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pD 308 (1057)
.|. +..+++++|+|+||++. ++|++|+.+|||+.+|++.+...+..- + ..+||
T Consensus 347 le~------------~~gt~~a~IlRvPF~~~~gi~~kwisrf~lWPyLe~fa~d~~~~i~~e-------~----~~~Pd 403 (550)
T PF00862_consen 347 LEK------------VSGTENARILRVPFGPEKGILRKWISRFDLWPYLEEFADDAEREILAE-------L----QGKPD 403 (550)
T ss_dssp EEE------------ETTESSEEEEEE-ESESTEEE-S---GGG-GGGHHHHHHHHHHHHHHH-------H----TS--S
T ss_pred ccc------------cCCCCCcEEEEecCCCCcchhhhccchhhchhhHHHHHHHHHHHHHHH-------h----CCCCc
Confidence 433 44567899999999985 379999999999999999887766531 1 25799
Q ss_pred EEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHH
Q 001541 309 AIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQE 388 (1057)
Q Consensus 309 vIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~ 388 (1057)
+||+||++.+.+|.++++++|+|+++|.|+++..|+. .+.+.++.++..|+|++++.+|..++++||.|||+|.||
T Consensus 404 lI~GnYsDgnlvA~LLs~~lgv~~~~iaHsLek~Ky~----~s~~~w~e~e~~Yhfs~qftAd~iamn~adfIItST~QE 479 (550)
T PF00862_consen 404 LIIGNYSDGNLVASLLSRKLGVTQCFIAHSLEKTKYE----DSDLYWKEIEEKYHFSCQFTADLIAMNAADFIITSTYQE 479 (550)
T ss_dssp EEEEEHHHHHHHHHHHHHHHT-EEEEE-SS-HHHHHH----TTTTTSHHHHHHH-HHHHHHHHHHHHHHSSEEEESSHHH
T ss_pred EEEeccCcchHHHHHHHhhcCCceehhhhcccccccc----ccCCCHHHHHhhccchhhhhHHHHHhhcCCEEEEcchHh
Confidence 9999999999999999999999999999999988865 577899999999999999999999999999999999999
Q ss_pred HHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCC
Q 001541 389 IEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQD 441 (1057)
Q Consensus 389 ~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~ 441 (1057)
+..++..++.|+.-....|+. ..|.|++.++++||+.++|||+|.+.|-|..
T Consensus 480 I~g~~~~~gqyes~~~ftlpg-Lyrvv~Gi~vFdPkfNiv~PGad~~iyFpyt 531 (550)
T PF00862_consen 480 IAGQKDTVGQYESHKAFTLPG-LYRVVNGIDVFDPKFNIVSPGADESIYFPYT 531 (550)
T ss_dssp HHB-SSSBHTTGGGSSEEETT-TEEEEES--TT-TTEEE------TTTS--TT
T ss_pred hcCCccccCCccchhhcchHh-HHhhhccccccCCcccccCCCCCcceecCCc
Confidence 998877666654321111111 5788999999999999999999999988764
|
4.1.13 from EC in the following reaction: |
| >TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase | Back alignment and domain information |
|---|
Probab=99.97 E-value=9.3e-30 Score=278.81 Aligned_cols=242 Identities=17% Similarity=0.251 Sum_probs=184.2
Q ss_pred ceEEEEEecCCCCC------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEE
Q 001541 774 KHIFVISVDCDSTT------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDL 847 (1057)
Q Consensus 774 kkLi~~DiDGTL~~------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I 847 (1057)
+.+|++||||||.. .+++.+++++++++++ |+.||+||||++.++..+++++++. .|+++||+||+.|
T Consensus 1 ~~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~~~~----gi~fv~aTGR~~~~~~~~~~~~~~~--~p~~~I~~NGa~I 74 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTDGDNQALLRLNALLEDHRGE----DSLLVYSTGRSPHSYKELQKQKPLL--TPDIWVTSVGSEI 74 (249)
T ss_pred CeEEEEcCCCcCcCCCCCChHHHHHHHHHHHHhhcc----CceEEEEcCCCHHHHHHHHhcCCCC--CCCEEEEcCCceE
Confidence 35899999999952 4778999999998886 8999999999999999999999884 5788999999999
Q ss_pred EeccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHH
Q 001541 848 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVK 927 (1057)
Q Consensus 848 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~ 927 (1057)
++.+ ....+..|..++...|..+.+......+.... .+.......+|++|..........+.
T Consensus 75 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~------------~~~~~~~~~~k~~~~~~~~~~~~~~~ 136 (249)
T TIGR01485 75 YYGG------AEVPDQHWAEYLSEKWQRDIVVAITDKFEELK------------PQPDLEQRPHKVSFFLDPEAAPEVIK 136 (249)
T ss_pred EeCC------CCcCCHHHHHHHhcccCHHHHHHHHhcCcccc------------cCCccccCCeeEEEEechhhhhHHHH
Confidence 9854 23456788888888888654433332222111 11112345678888753222122245
Q ss_pred HHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccC-cceEEEeCCC
Q 001541 928 ELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGG-VHKTVILKGI 1006 (1057)
Q Consensus 928 el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~-ag~gVAMgNa 1006 (1057)
++.+.+...+..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+. ++.+|||+||
T Consensus 137 ~l~~~l~~~~~~~~~~~~~~~-~ldi~~~~~~K~~al~~l~~~~~i~~~~~i~-~GD~~N-D-~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 137 QLTEMLKETGLDVKLIYSSGK-DLDILPQGSGKGQALQYLLQKLAMEPSQTLV-CGDSGN-D-IELFEIGSVRGVIVSNA 212 (249)
T ss_pred HHHHHHHhcCCCEEEEEECCc-eEEEEeCCCChHHHHHHHHHHcCCCccCEEE-EECChh-H-HHHHHccCCcEEEECCC
Confidence 667777666677888888875 9999999999999999999999999999999 888888 8 999998 6799999999
Q ss_pred chhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCcc
Q 001541 1007 CSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 1007 ~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~i 1055 (1057)
..+. +.++.. .+. ...|+|+.+.++||+++|+|||++
T Consensus 213 ~~~~--k~~~~~---------~~~-~~~~~~~~~~~~Gi~e~l~~~~~~ 249 (249)
T TIGR01485 213 QEEL--LQWYDE---------NAK-DKIYHASERCAGGIIEAIAHFDLL 249 (249)
T ss_pred HHHH--HHHHHh---------ccc-CcEEEecCCCcHHHHHHHHHcCCC
Confidence 9333 333321 012 244688999999999999999985
|
Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain. |
| >PLN02382 probable sucrose-phosphatase | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.2e-30 Score=296.47 Aligned_cols=246 Identities=20% Similarity=0.241 Sum_probs=185.6
Q ss_pred CcceEEEEEecCCCC-C----cchHHHHHHH-HHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCc
Q 001541 772 RRKHIFVISVDCDST-T----GLLDATKKIC-EAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGS 845 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~-~----~i~~~t~~al-~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa 845 (1057)
.++.||++||||||. + .++.....++ +++.++ |+.|++||||++..+.++++++++. .||++||+||+
T Consensus 7 ~~~~lI~sDLDGTLL~~~~~~~~s~~~~~~l~~~~~~~----gi~fv~aTGR~~~~~~~l~~~~~l~--~p~~~I~~nGt 80 (413)
T PLN02382 7 SPRLMIVSDLDHTMVDHHDPENLSLLRFNALWEAEYRH----DSLLVFSTGRSPTLYKELRKEKPLL--TPDITIMSVGT 80 (413)
T ss_pred CCCEEEEEcCCCcCcCCCCccchhHHHHHHHHHHhhcC----CeeEEEEcCCCHHHHHHHHHhCCCC--CCCEEEEcCCc
Confidence 457899999999994 2 4554455555 777765 8999999999999999999999884 58899999999
Q ss_pred EEEeccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCcc
Q 001541 846 DLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPP 925 (1057)
Q Consensus 846 ~I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~ 925 (1057)
+|++.+ ....+..|..++...|....+...+..++... .+....+..+|++|+..+......
T Consensus 81 ~I~~~~------~~~~d~~w~~~l~~~w~~~~v~~~~~~~~~l~------------~q~~~~~~~~Ki~~~~~~~~~~~~ 142 (413)
T PLN02382 81 EIAYGE------SMVPDHGWVEYLNKKWDREIVVEETSKFPELK------------LQPETEQRPHKVSFYVDKKKAQEV 142 (413)
T ss_pred EEEeCC------CCccChhHHHHHhccCChhhHHHHHhcCCCcc------------cCCcccCCCeEEEEEechHHhHHH
Confidence 999864 34467889999999998654544433332211 222334567899888643222222
Q ss_pred HHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHh---CCCcccEEEEecCCCCCCccccccCcc-eEE
Q 001541 926 VKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW---GVELSKMVVFVGESGDTDYEGLLGGVH-KTV 1001 (1057)
Q Consensus 926 ~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~l---gI~~e~viaf~GD~~n~D~~eML~~ag-~gV 1001 (1057)
..++.+.+...+..+.++++.+. ++||+|+++|||+||++|+++| |+++++++| |||++| | ++||+.+| +||
T Consensus 143 ~~~l~~~~~~~g~~~~i~~s~~~-~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~ia-fGDs~N-D-leMl~~ag~~gv 218 (413)
T PLN02382 143 IKELSERLEKRGLDVKIIYSGGI-DLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLV-CGDSGN-D-AELFSVPDVYGV 218 (413)
T ss_pred HHHHHHHHHhcCCcEEEEEECCc-EEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEE-EeCCHH-H-HHHHhcCCCCEE
Confidence 34555556555677888888886 9999999999999999999999 999999999 888888 8 99999999 899
Q ss_pred EeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCcc
Q 001541 1002 ILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 1002 AMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~i 1055 (1057)
||+||. .+.+..+++. ..+.+++. .+.++.++||++||+||+++
T Consensus 219 am~NA~--~elk~~a~~~-------~~~~~~~~-~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 219 MVSNAQ--EELLQWYAEN-------AKDNPKII-HATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred EEcCCc--HHHHHHHHhh-------ccCCCcEE-EcCCCCccHHHHHHHHhCCC
Confidence 999999 4334333331 11223433 56788999999999999986
|
|
| >cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-28 Score=274.44 Aligned_cols=267 Identities=24% Similarity=0.276 Sum_probs=209.8
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|.. .....+.+.... ++|+|++.|+.......... ... ..+...+..+|.+++
T Consensus 80 ~~~dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~~~-----------~~~------~~~~~~~~~~d~ii~ 141 (353)
T cd03811 80 EKPDVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKRKL-----------RLL------LLIRKLYRRADKIVA 141 (353)
T ss_pred cCCCEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhccch-----------hHH------HHHHhhccccceEEE
Confidence 46999999987 444444444433 89999999998664422110 000 235567999999999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
.|+...+.+...+.. +..++.+||||+|...+.+.....
T Consensus 142 ~s~~~~~~~~~~~~~----------------------~~~~~~vi~~~~~~~~~~~~~~~~------------------- 180 (353)
T cd03811 142 VSEGVKEDLLKLLGI----------------------PPDKIEVIYNPIDIEEIRALAEEP------------------- 180 (353)
T ss_pred eccchhhhHHHhhcC----------------------CccccEEecCCcChhhcCcccchh-------------------
Confidence 999887776655432 123899999999988776432110
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
. ......++++|+++||+.+.||++.+++|+..+... .+++.+ ++|+++. ...+.+++.++++
T Consensus 181 --~-~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~--~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~ 244 (353)
T cd03811 181 --L-ELGIPPDGPVILAVGRLSPQKGFDTLIRAFALLRKE--GPDARLVILGDGPL-----------REELEALAKELGL 244 (353)
T ss_pred --h-hcCCCCCceEEEEEecchhhcChHHHHHHHHHhhhc--CCCceEEEEcCCcc-----------HHHHHHHHHhcCC
Confidence 0 122245678999999999999999999999999754 345554 7787764 3456678889999
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHH
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.++|.|.|. .+++..+|+.| |++|+||..|+||++++|||++|+|||+++.||..|++.++.+|+++++.|.++
T Consensus 245 ~~~v~~~g~--~~~~~~~~~~~----d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~ 318 (353)
T cd03811 245 ADRVHFLGF--QSNPYPYLKAA----DLFVLSSRYEGFPNVLLEAMALGTPVVATDCPGPREILEDGENGLLVPVGDEAA 318 (353)
T ss_pred CccEEEecc--cCCHHHHHHhC----CEEEeCcccCCCCcHHHHHHHhCCCEEEcCCCChHHHhcCCCceEEECCCCHHH
Confidence 999999999 46899999999 999999999999999999999999999999999999999999999999999999
Q ss_pred H---HHHHHHHHhCHHHHHHHHHHHHHHh-hcCC
Q 001541 623 V---ADALLKLVADKQLWARCRQNGLKNI-HLFS 652 (1057)
Q Consensus 623 l---a~aI~~ll~d~~~~~~~~~~~~~~v-~~fs 652 (1057)
+ .++|..++.+++.+++++.++++.+ ++|+
T Consensus 319 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (353)
T cd03811 319 LAAAALALLDLLLDPELRERLAAAARERVAREYS 352 (353)
T ss_pred HHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhc
Confidence 9 7788888889999999999888777 5775
|
WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core. |
| >PLN02275 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=99.97 E-value=4.6e-28 Score=281.09 Aligned_cols=335 Identities=15% Similarity=0.117 Sum_probs=223.3
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
|. |.+..+..++..|++.|+ ++|++++..... ... +....+|++|+++|. +... .
T Consensus 14 ~~-g~~~r~~~~~~~l~~~~~-~~v~vi~~~~~~--------~~~-------------~~~~~~~v~v~r~~~-~~~~-~ 68 (371)
T PLN02275 14 DF-GRSPRMQYHALSLARQAS-FQVDVVAYGGSE--------PIP-------------ALLNHPSIHIHLMVQ-PRLL-Q 68 (371)
T ss_pred CC-CCCHHHHHHHHHHHhcCC-ceEEEEEecCCC--------CCH-------------HHhcCCcEEEEECCC-cccc-c
Confidence 44 455567778899998874 589999764210 011 112235899999986 3311 1
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc---hHHHHHHHhcCCCCEEEEecCCchhhHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA---GDSAALLSGALNVPMLFTGHSLGRDKLE 345 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~---~~~a~~l~~~~~iP~V~t~H~l~~~~~~ 345 (1057)
....++..+ .+.......+..+.+.+.. +..+||+||+|.+.. ...+.++++..++|+|+|.|+++..
T Consensus 69 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--- 139 (371)
T PLN02275 69 RLPRVLYAL-ALLLKVAIQFLMLLWFLCV-----KIPRPDVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--- 139 (371)
T ss_pred ccccchHHH-HHHHHHHHHHHHHHHHHHh-----hCCCCCEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH---
Confidence 111111100 0111111111111111110 125799999987432 3456667777899999999998521
Q ss_pred HHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcE
Q 001541 346 QLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRM 425 (1057)
Q Consensus 346 ~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv 425 (1057)
....|.... ...+++.+++ |++.++.||.||++|+...+.+...+ |. ++
T Consensus 140 -~~~~~~~~~---~~~~~~~~~~--e~~~~~~ad~ii~~S~~~~~~l~~~~----------------------g~---~i 188 (371)
T PLN02275 140 -LLALSLGRS---HPLVRLYRWY--ERHYGKMADGHLCVTKAMQHELDQNW----------------------GI---RA 188 (371)
T ss_pred -HHhcccCCC---CHHHHHHHHH--HHHHHhhCCEEEECCHHHHHHHHHhc----------------------CC---Ce
Confidence 111121111 1123344443 77889999999999998777653321 11 37
Q ss_pred EEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc--
Q 001541 426 AIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL-- 503 (1057)
Q Consensus 426 ~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~-- 503 (1057)
.+||||+ .+.|.|..... ....+...+|+++||+.+.||++.+++|+..+...
T Consensus 189 ~vi~n~~-~~~f~~~~~~~------------------------~~~~~~~~~i~~~grl~~~k~~~~li~a~~~l~~~~~ 243 (371)
T PLN02275 189 TVLYDQP-PEFFRPASLEI------------------------RLRPNRPALVVSSTSWTPDEDFGILLEAAVMYDRRVA 243 (371)
T ss_pred EEECCCC-HHHcCcCCchh------------------------cccCCCcEEEEEeCceeccCCHHHHHHHHHHHHhhhh
Confidence 8999985 46665432110 00123345788999999999999999999887321
Q ss_pred -------------cCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe-CCCCCCCcHHHHHHHhhcCC
Q 001541 504 -------------RELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PKHHKQSDVPEIYRLAAKTK 568 (1057)
Q Consensus 504 -------------~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f-~g~v~~~dl~~ly~~Aa~~~ 568 (1057)
...+++.+ |+|+|+. .++++++++++++.+ |.| .|+++.++++.+|+.|
T Consensus 244 ~~~~~~~~~~~~~~~~~~i~l~ivG~G~~-----------~~~l~~~~~~~~l~~-v~~~~~~~~~~~~~~~l~~a---- 307 (371)
T PLN02275 244 ARLNESDSASGKQSLYPRLLFIITGKGPQ-----------KAMYEEKISRLNLRH-VAFRTMWLEAEDYPLLLGSA---- 307 (371)
T ss_pred hccccccccccccccCCCeEEEEEeCCCC-----------HHHHHHHHHHcCCCc-eEEEcCCCCHHHHHHHHHhC----
Confidence 12356765 8899986 467888999999976 666 5578999999999999
Q ss_pred cEEEEcC---CCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHH
Q 001541 569 GVFINPA---FIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 631 (1057)
Q Consensus 569 dv~v~ps---~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1057)
|++|+|+ ..|+||++++||||||+|||+++.||..|++.++.+|++++ |+++++++|.++|
T Consensus 308 Dv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 308 DLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred CEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 9999863 34899999999999999999999999999999999999996 7999999998875
|
|
| >TIGR02918 accessory Sec system glycosylation protein GtfA | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.2e-28 Score=291.73 Aligned_cols=281 Identities=18% Similarity=0.194 Sum_probs=211.9
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.++||+|++.+.....+ .+.....+|.++++|+-....... .+ .....+..|... ....+.+|.||++
T Consensus 210 ~~~di~i~dr~~~~~~~-~~~~~~~~~~v~~lH~~h~~~~~~---~~--~~~~~~~~y~~~------~~~~~~~D~iI~~ 277 (500)
T TIGR02918 210 TKKDIIILDRSTGIGQA-VLENKGPAKLGVVVHAEHFSESAT---NE--TYILWNNYYEYQ------FSNADYIDFFITA 277 (500)
T ss_pred CCCCEEEEcCCcccchH-HHhcCCCceEEEEEChhhhcCccC---cc--hhHHHHHHHHHH------HhchhhCCEEEEC
Confidence 46899999876432222 344556899999999753221100 00 000011122211 1246788999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+...+.. ++...+++.+||+|++...+.+..
T Consensus 278 S~~~~~~l~~~~~~-------------------~~~~~~ki~viP~g~~~~~~~~~~----------------------- 315 (500)
T TIGR02918 278 TDIQNQILKNQFKK-------------------YYNIEPRIYTIPVGSLDELQYPEQ----------------------- 315 (500)
T ss_pred CHHHHHHHHHHhhh-------------------hcCCCCcEEEEcCCCcccccCccc-----------------------
Confidence 98876665443221 122234899999998654433210
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
......|+++||+.+.||++.+|+|+..+.+ ..|++.| |+|+|+. ...+.+++.++++.
T Consensus 316 -------~r~~~~il~vGrl~~~Kg~~~li~A~~~l~~--~~p~~~l~i~G~G~~-----------~~~l~~~i~~~~l~ 375 (500)
T TIGR02918 316 -------ERKPFSIITASRLAKEKHIDWLVKAVVKAKK--SVPELTFDIYGEGGE-----------KQKLQKIINENQAQ 375 (500)
T ss_pred -------ccCCeEEEEEeccccccCHHHHHHHHHHHHh--hCCCeEEEEEECchh-----------HHHHHHHHHHcCCC
Confidence 1234579999999999999999999999874 3456665 7898864 46688899999999
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhhcCCceEEeCCC----
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPH---- 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G-g~~eiv~~~~~Gllv~p~---- 618 (1057)
++|.|.|+. ++.++|+.| |++|+||..||||++++||||||+|||+++.+ |++|+|.++.+|+++++.
T Consensus 376 ~~V~f~G~~---~~~~~~~~a----dv~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 376 DYIHLKGHR---NLSEVYKDY----ELYLSASTSEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEED 448 (500)
T ss_pred CeEEEcCCC---CHHHHHHhC----CEEEEcCccccccHHHHHHHHhCCCEEEecCCCCCHHHccCCCCEEEEeCCcccc
Confidence 999999963 799999999 99999999999999999999999999999986 899999999999999743
Q ss_pred C----HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 001541 619 D----QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 619 d----~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~ 667 (1057)
| +++||++|.++++ ++.++++++++++.++.|||+.++++|.++++++
T Consensus 449 d~~~~~~~la~~I~~ll~-~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~~~ 500 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFN-SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVREV 500 (500)
T ss_pred chhHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC
Confidence 3 8899999999995 5679999999999889999999999999999764
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system. |
| >cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=2.8e-28 Score=280.48 Aligned_cols=265 Identities=17% Similarity=0.210 Sum_probs=197.2
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHH---HHH-HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCE
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLE---QLL-KQARLSRDEINATYKIMRRIEAEELSLDASEI 380 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~---~l~-~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~ 380 (1057)
.+||+||++..... ..+....++|.+++.|+..+..+. ... ..+..........++..++ .|..+++.+|.
T Consensus 82 ~~~D~v~~~~~~~~---~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~ 156 (351)
T cd03804 82 SGYDLVISSSHAVA---KGVITRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRI--WDRRSAARVDY 156 (351)
T ss_pred cCCCEEEEcCcHHh---ccccCCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHH--HHHHHhcCCCE
Confidence 46999999764221 112245689999999975322111 111 1111111111112233333 36678999999
Q ss_pred EEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCC
Q 001541 381 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP 460 (1057)
Q Consensus 381 Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~ 460 (1057)
|+++|+...+.+.+.+.. +..+||||+|.+.|.+..
T Consensus 157 ii~~S~~~~~~~~~~~~~-------------------------~~~vi~~~~d~~~~~~~~------------------- 192 (351)
T cd03804 157 FIANSRFVARRIKKYYGR-------------------------DATVIYPPVDTDRFTPAE------------------- 192 (351)
T ss_pred EEECCHHHHHHHHHHhCC-------------------------CcEEECCCCCHhhcCcCC-------------------
Confidence 999999988776554332 567999999998776421
Q ss_pred chHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 461 PIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 461 ~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
...+.++++||+.+.||++.+++|+..+. ..+ +|+|++++. ..+.+
T Consensus 193 ------------~~~~~il~~G~~~~~K~~~~li~a~~~~~-----~~l-~ivG~g~~~-----------~~l~~----- 238 (351)
T cd03804 193 ------------EKEDYYLSVGRLVPYKRIDLAIEAFNKLG-----KRL-VVIGDGPEL-----------DRLRA----- 238 (351)
T ss_pred ------------CCCCEEEEEEcCccccChHHHHHHHHHCC-----CcE-EEEECChhH-----------HHHHh-----
Confidence 23567999999999999999999999873 233 578887641 22222
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1057)
+..++|.|+|+++.+++..+|+.| |++|+||. |+||++++||||||+|||+++.||..|++.++.+|++++|.|+
T Consensus 239 ~~~~~V~~~g~~~~~~~~~~~~~a----d~~v~ps~-e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~~~G~~~~~~~~ 313 (351)
T cd03804 239 KAGPNVTFLGRVSDEELRDLYARA----RAFLFPAE-EDFGIVPVEAMASGTPVIAYGKGGALETVIDGVTGILFEEQTV 313 (351)
T ss_pred hcCCCEEEecCCCHHHHHHHHHhC----CEEEECCc-CCCCchHHHHHHcCCCEEEeCCCCCcceeeCCCCEEEeCCCCH
Confidence 445789999999999999999999 99999999 9999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~ 660 (1057)
++++++|..++++++ .++++.++.+++|+|+.+.+++
T Consensus 314 ~~la~~i~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 350 (351)
T cd03804 314 ESLAAAVERFEKNED---FDPQAIRAHAERFSESRFREKI 350 (351)
T ss_pred HHHHHHHHHHHhCcc---cCHHHHHHHHHhcCHHHHHHHh
Confidence 999999999999884 2344555566789999988765
|
wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea. |
| >cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-28 Score=287.99 Aligned_cols=276 Identities=16% Similarity=0.223 Sum_probs=218.3
Q ss_pred CcceEEEEcCCC-chHHHHHHHhcCCCC-EEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEE
Q 001541 305 VWPVAIHGHYAD-AGDSAALLSGALNVP-MLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVI 382 (1057)
Q Consensus 305 ~~pDvIh~h~~~-~~~~a~~l~~~~~iP-~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi 382 (1057)
..+|++|+++.. .+..+..+.+..+.+ +|.+.|+..... .. ....+... .+.+++.+|.|+
T Consensus 126 ~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~--~~----------~~~~~~~~-----~~~~~~~~d~ii 188 (407)
T cd04946 126 GQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYE--DR----------YPSGYIPL-----RRYLLSSLDAVF 188 (407)
T ss_pred cCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhh--hh----------ccccchHH-----HHHHHhcCCEEE
Confidence 457899997653 344445566666665 999999764211 00 00111111 234688999999
Q ss_pred ecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 383 TSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 383 ~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
++|+...+.+...|+. ...++.++|+|++...+.+..
T Consensus 189 ~~S~~~~~~l~~~~~~----------------------~~~ki~vi~~gv~~~~~~~~~--------------------- 225 (407)
T cd04946 189 PCSEQGRNYLQKRYPA----------------------YKEKIKVSYLGVSDPGIISKP--------------------- 225 (407)
T ss_pred ECCHHHHHHHHHHCCC----------------------ccccEEEEECCcccccccCCC---------------------
Confidence 9999988876555433 223889999999987664321
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcC
Q 001541 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD 541 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~ 541 (1057)
...+.+.|+++||+.+.||++.+++|+..+.+..+..++.+ ++|+++. ...+.+++...+
T Consensus 226 --------~~~~~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~-----------~~~l~~~~~~~~ 286 (407)
T cd04946 226 --------SKDDTLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPL-----------EDTLKELAESKP 286 (407)
T ss_pred --------CCCCCEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchH-----------HHHHHHHHHhcC
Confidence 02456789999999999999999999999976555456664 7788764 456777777788
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCC-CH
Q 001541 542 LYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH-DQ 620 (1057)
Q Consensus 542 l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~-d~ 620 (1057)
..++|.|+|+++.+++..+|+.+ ..|+|++||..||||++++||||||+|||+|+.||..|++.++.+|+++++. |+
T Consensus 287 ~~~~V~f~G~v~~~e~~~~~~~~--~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~ 364 (407)
T cd04946 287 ENISVNFTGELSNSEVYKLYKEN--PVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNGGNGLLLSKDPTP 364 (407)
T ss_pred CCceEEEecCCChHHHHHHHhhc--CCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCCCcEEEeCCCCCH
Confidence 88899999999999999999863 1189999999999999999999999999999999999999999899999864 89
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHH
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYL 661 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l 661 (1057)
++++++|.+++++++++++++++|++.+ ++|||+...++|.
T Consensus 365 ~~la~~I~~ll~~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 365 NELVSSLSKFIDNEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 9999999999999999999999999999 6999999998875
|
AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea. |
| >PRK10976 putative hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.8e-29 Score=279.45 Aligned_cols=244 Identities=12% Similarity=0.084 Sum_probs=159.7
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|||++||||||. +.+++.++++|++++++ |+.|+|||||++.++.++++.++++ +++||+||+.|+..
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~~ 73 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTAR----GIHFVFATGRHHVDVGQIRDNLEIK----SYMITSNGARVHDT 73 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CeEEEcCCcEEECC
Confidence 4899999999993 56999999999999987 9999999999999999999999983 47899999999964
Q ss_pred cCCC-CCCCccccc-----cch---------hhcccccchhh-HHHHHHHhhhcccccccccccccccccccccCcceEE
Q 001541 851 TLNS-EDGPFVVDF-----YYH---------SHIEYRWGGEG-LRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYA 914 (1057)
Q Consensus 851 ~~~~-~~~~~~~d~-----~~~---------~~i~~~w~~e~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~ 914 (1057)
.... ....+..+. .+. ......|.... ................ .............++.
T Consensus 74 ~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~ki~ 148 (266)
T PRK10976 74 DGNLIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQ-----LYEPGLLEPDGVSKVF 148 (266)
T ss_pred CCCEehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcce-----eechhhcccCCceEEE
Confidence 3211 000000000 000 00000010000 0000000000000000 0000000011234444
Q ss_pred EEecCCCCCccHHHHHHHHHHh-cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCcccc
Q 001541 915 FSVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGL 993 (1057)
Q Consensus 915 ~~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eM 993 (1057)
+...++ ..+.++.+.+... ...+.++.+.+. ++||+|+++|||.||++|++++||++++++| |||+.| | ++|
T Consensus 149 ~~~~~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~lgi~~~~via-fGD~~N-D-i~M 221 (266)
T PRK10976 149 FTCDSH---EKLLPLEQAINARWGDRVNVSFSTLT-CLEVMAGGVSKGHALEAVAKKLGYSLKDCIA-FGDGMN-D-AEM 221 (266)
T ss_pred EEcCCH---HHHHHHHHHHHHHhCCcEEEEEeCCc-eEEEEcCCCChHHHHHHHHHHcCCCHHHeEE-EcCCcc-c-HHH
Confidence 332211 2234455555433 345777777775 9999999999999999999999999999999 888888 8 999
Q ss_pred ccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCc
Q 001541 994 LGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054 (1057)
Q Consensus 994 L~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~ 1054 (1057)
|+.+|+||||+||. .+.|..|+. .+||.++++||++++|++|.+
T Consensus 222 l~~ag~~vAm~NA~--~~vK~~A~~---------------~~v~~~n~edGVa~~l~~~~~ 265 (266)
T PRK10976 222 LSMAGKGCIMGNAH--QRLKDLLPE---------------LEVIGSNADDAVPHYLRKLYL 265 (266)
T ss_pred HHHcCCCeeecCCc--HHHHHhCCC---------------CeecccCchHHHHHHHHHHhh
Confidence 99999999999999 444555541 148889999999999999853
|
|
| >PLN02501 digalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.5e-28 Score=282.73 Aligned_cols=377 Identities=14% Similarity=0.120 Sum_probs=242.9
Q ss_pred ceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcc
Q 001541 165 KLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 244 (1057)
Q Consensus 165 ~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~ 244 (1057)
+-.|++++.-.+ |. -||-+..-.. =|-.|++.|+ ++|+++.+=....+...-|+.....-.+.+-+.+
T Consensus 322 ~r~~~ivTtAsl----PW------mTGtavnpL~-rAayLa~~~~-~~VtlviPWl~~~dq~~vy~~~~~F~~p~eQe~~ 389 (794)
T PLN02501 322 KRHVAIVTTASL----PW------MTGTAVNPLF-RAAYLAKSAK-QNVTLLVPWLCKSDQELVYPNNLTFSSPEEQESY 389 (794)
T ss_pred CCeEEEEEcccC----cc------cccccccHHH-HHHHhcccCC-ceEEEEEecCCccccccccCCCcccCCHHHHHHH
Confidence 347999997776 22 3555554443 4678899866 9999987643322222223211100000000000
Q ss_pred c-----cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC-Cch
Q 001541 245 M-----DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAG 318 (1057)
Q Consensus 245 ~-----~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~-~~~ 318 (1057)
. ++++-.++..|..+|... ...+..+.|. . .+.+.|.. ..|||||.+.+ ..|
T Consensus 390 ir~wl~~r~g~~~~~~i~fYpg~~---~~~~~SI~p~-----g-------dI~~~L~~-------f~PDVVHLatP~~LG 447 (794)
T PLN02501 390 IRNWLEERIGFKADFKISFYPGKF---SKERRSIIPA-----G-------DTSQFIPS-------KDADIAILEEPEHLN 447 (794)
T ss_pred HHHHHHHhcCCCCCceEEeecchh---ccCCccccch-----H-------HHHHHhhc-------cCCCEEEECCchhhc
Confidence 0 122223344454444311 1223333332 1 11222222 67999999987 466
Q ss_pred HH--HHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhh-cCCEEEecCHHHHHHHHhh
Q 001541 319 DS--AALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLD-ASEIVITSTRQEIEEQWRL 395 (1057)
Q Consensus 319 ~~--a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~-~ad~Vi~~S~~~~~~~~~~ 395 (1057)
+. |..++++++ |+|.++|.....+.... ..|.+.. ..++..+++ ..+ +||.|+++|.... .+
T Consensus 448 w~~~Glr~ArKl~-PVVasyHTny~eYl~~y-~~g~L~~----~llk~l~~~-----v~r~hcD~VIaPS~atq-~L--- 512 (794)
T PLN02501 448 WYHHGKRWTDKFN-HVVGVVHTNYLEYIKRE-KNGALQA----FFVKHINNW-----VTRAYCHKVLRLSAATQ-DL--- 512 (794)
T ss_pred cHHHHHHHHHHcC-CeEEEEeCCcHHHHhHh-cchhHHH----HHHHHHHHH-----HHHhhCCEEEcCCHHHH-Hh---
Confidence 66 888898999 99999999887655433 2222111 111122221 121 2899999996543 21
Q ss_pred hCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCC
Q 001541 396 YDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRK 475 (1057)
Q Consensus 396 y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 475 (1057)
.. ++....+|||.+.|.|.... ....++......
T Consensus 513 -~~-------------------------~vI~nVnGVDte~F~P~~r~--------------------~~~r~lgi~~~~ 546 (794)
T PLN02501 513 -PK-------------------------SVICNVHGVNPKFLKIGEKV--------------------AEERELGQQAFS 546 (794)
T ss_pred -cc-------------------------cceeecccccccccCCcchh--------------------HHHHhcCCcccc
Confidence 00 11122269999999875321 011222222334
Q ss_pred cEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001541 476 PVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 554 (1057)
Q Consensus 476 ~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~ 554 (1057)
+.++|+||+.+.||++.||+|+..+... .+++.| |+|+|++ ...+.+++.++++ .|.|+|. .
T Consensus 547 kgiLfVGRLa~EKGld~LLeAla~L~~~--~pnvrLvIVGDGP~-----------reeLe~la~eLgL--~V~FLG~--~ 609 (794)
T PLN02501 547 KGAYFLGKMVWAKGYRELIDLLAKHKNE--LDGFNLDVFGNGED-----------AHEVQRAAKRLDL--NLNFLKG--R 609 (794)
T ss_pred CceEEEEcccccCCHHHHHHHHHHHHhh--CCCeEEEEEcCCcc-----------HHHHHHHHHHcCC--EEEecCC--C
Confidence 5689999999999999999999988642 346664 8899986 4567778888887 4899998 4
Q ss_pred CcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 555 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
+++..+|+.+ ||||+||..|+||++++||||||+|||+++.||. +++.++.+|+++ .|+++++++|.++|.++
T Consensus 610 dd~~~lyasa----DVFVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~-e~V~~g~nGll~--~D~EafAeAI~~LLsd~ 682 (794)
T PLN02501 610 DHADDSLHGY----KVFINPSISDVLCTATAEALAMGKFVVCADHPSN-EFFRSFPNCLTY--KTSEDFVAKVKEALANE 682 (794)
T ss_pred CCHHHHHHhC----CEEEECCCcccchHHHHHHHHcCCCEEEecCCCC-ceEeecCCeEec--CCHHHHHHHHHHHHhCc
Confidence 6778999999 9999999999999999999999999999999985 446677788876 59999999999999987
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 635 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
..+..+. ....|||+..++++++.-+
T Consensus 683 ~~rl~~~-----a~~~~SWeAaadrLle~~~ 708 (794)
T PLN02501 683 PQPLTPE-----QRYNLSWEAATQRFMEYSD 708 (794)
T ss_pred hhhhHHH-----HHhhCCHHHHHHHHHHhhc
Confidence 6443322 1348999999999998654
|
|
| >COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.96 E-value=4e-29 Score=276.33 Aligned_cols=233 Identities=15% Similarity=0.150 Sum_probs=158.7
Q ss_pred cceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEe
Q 001541 773 RKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~ 849 (1057)
..|+|++||||||. +.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||++|++
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~----g~~v~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~~ 73 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREK----GVKVVLATGRPLPDVLSILEELGLD----GPLITFNGALIYN 73 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC----ccEEEeCCeEEec
Confidence 46899999999993 66999999999999987 9999999999999999999999994 3799999999998
Q ss_pred ccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhc---cccccccccccccc---------------------ccc
Q 001541 850 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAESGEKVLT---------------------PAE 905 (1057)
Q Consensus 850 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~~~~~~~~~~~~~~---------------------~~~ 905 (1057)
.+. .. ....+..+.+..++...... ....... ..... ...
T Consensus 74 ~~~------~i--------~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (264)
T COG0561 74 GGE------LL--------FQKPLSREDVEELLELLEDFQGIALVLYTD--DGIYLTKKRGTFAEARIGFANLSPVGREA 137 (264)
T ss_pred CCc------EE--------eeecCCHHHHHHHHHHHHhccCceEEEEec--cceeeccCCCcccccccccccccccccch
Confidence 731 11 11122222233222211110 0000000 00000 000
Q ss_pred cccCcceEEEEecCCCCCccHHHHHHHHHHhcC--cEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEec
Q 001541 906 QLSTNYCYAFSVQKPGMTPPVKELRKVLRIQAL--RCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVG 983 (1057)
Q Consensus 906 ~~~~~~k~~~~~~~~~~~~~~~el~~~l~~~~~--~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~G 983 (1057)
......++...... .....++.+.+..... ...+..+.+. ++||+|+|+|||.||++|+++||++++++|| ||
T Consensus 138 ~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~~~~~~s~~~-~lei~~~g~~K~~al~~l~~~lgi~~~~v~a-fG 212 (264)
T COG0561 138 AELEDNKIIALDKD---HEILEELVEALRKRFPDLGLTVSSSGPI-SLDITPKGVSKGYALQRLAKLLGIKLEEVIA-FG 212 (264)
T ss_pred hhcCcceEEEEecC---hHhHHHHHHHHhhhccccceEEEEcCCc-eEEEecCCCchHHHHHHHHHHhCCCHHHeEE-eC
Confidence 00000111111111 1234455555554433 3344444443 5999999999999999999999999999999 88
Q ss_pred CCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCcc
Q 001541 984 ESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 984 D~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~i 1055 (1057)
|+.| | ++||+.+|+|||||||. .+.+..|+ ++|.+++++||+++|+++.++
T Consensus 213 D~~N-D-~~Ml~~ag~gvam~Na~--~~~k~~A~-----------------~vt~~n~~~Gv~~~l~~~~~~ 263 (264)
T COG0561 213 DSTN-D-IEMLEVAGLGVAMGNAD--EELKELAD-----------------YVTTSNDEDGVAEALEKLLLL 263 (264)
T ss_pred Cccc-c-HHHHHhcCeeeeccCCC--HHHHhhCC-----------------cccCCccchHHHHHHHHHhcc
Confidence 8888 8 99999999999999998 33333333 599999999999999999765
|
|
| >PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-29 Score=279.66 Aligned_cols=242 Identities=14% Similarity=0.165 Sum_probs=159.4
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|||++||||||. +.+++.++++|++++++ |+.|+|||||++.++.+++++++++ +++||+||+.|++.
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~I~~~ 73 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRER----DITLTFATGRHVLEMQHILGALSLD----AYLITGNGTRVHSL 73 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCCC----CcEEecCCcEEEcC
Confidence 5799999999993 67999999999999987 9999999999999999999999983 47899999999964
Q ss_pred cCCCC-CCCccccc-------cchhhc------ccccch-hhHHHHHHHhhhcccccccccccccccccccccCcceEEE
Q 001541 851 TLNSE-DGPFVVDF-------YYHSHI------EYRWGG-EGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAF 915 (1057)
Q Consensus 851 ~~~~~-~~~~~~d~-------~~~~~i------~~~w~~-e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 915 (1057)
..... ...+..+. .+...+ ...|.. .................. ..-.........+|+.+
T Consensus 74 ~~~~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ki~~ 148 (272)
T PRK15126 74 EGELLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQ-----LIDLKRLPAHGVTKICF 148 (272)
T ss_pred CCCEEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceE-----EecHHHccccCceEEEE
Confidence 32110 00000000 000000 000100 000000000000000000 00000001122455544
Q ss_pred EecCCCCCccHHHHHHHHHHh-cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccc
Q 001541 916 SVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLL 994 (1057)
Q Consensus 916 ~~~~~~~~~~~~el~~~l~~~-~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML 994 (1057)
.. ++ ..++++.+.+... ...+.++.+.+. ++||+|+++|||.||++|++++||++++++| |||+.| | ++||
T Consensus 149 ~~-~~---~~~~~~~~~l~~~~~~~~~~~~s~~~-~~eI~~~g~sKg~al~~l~~~~gi~~~~v~a-fGD~~N-D-i~Ml 220 (272)
T PRK15126 149 CG-DH---DDLTRLQIQLNEALGERAHLCFSATD-CLEVLPVGCNKGAALAVLSQHLGLSLADCMA-FGDAMN-D-REML 220 (272)
T ss_pred EC-CH---HHHHHHHHHHHHHhcCCEEEEEcCCc-EEEeecCCCChHHHHHHHHHHhCCCHHHeEE-ecCCHH-H-HHHH
Confidence 32 22 2345566656543 345777777765 8999999999999999999999999999999 888888 8 9999
Q ss_pred cCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 995 GGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 995 ~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
+.+|+|||||||. .+.|..|+. ..||.++++|||+++|+++-
T Consensus 221 ~~ag~~vAm~Na~--~~vK~~A~~---------------~~v~~~n~edGva~~l~~~~ 262 (272)
T PRK15126 221 GSVGRGFIMGNAM--PQLRAELPH---------------LPVIGHCRNQAVSHYLTHWL 262 (272)
T ss_pred HHcCCceeccCCh--HHHHHhCCC---------------CeecCCCcchHHHHHHHHHh
Confidence 9999999999999 444444432 13677999999999999863
|
|
| >TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.6e-28 Score=289.38 Aligned_cols=366 Identities=15% Similarity=0.136 Sum_probs=247.1
Q ss_pred CeEEEEccCCCc--c---cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHH
Q 001541 253 GAYIIRIPFGPK--D---KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSA 321 (1057)
Q Consensus 253 gv~i~rip~~p~--~---~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a 321 (1057)
++.++.++..+. + ....+..+||.+.. |-...+....+.-+.+++.+...- ..-|+|.+|......++
T Consensus 64 ~~~~~~v~l~~~~~~~~y~gf~n~~lWPl~H~~~~~~~~~~~~w~~Y~~vN~~fA~~i~~~~-~~~d~vwvhDYhl~l~p 142 (456)
T TIGR02400 64 KITLAPVFLSEEDVDGYYNGFSNSTLWPLFHYRPDLIRYDRKAWEAYRRVNRLFAEALAPLL-QPGDIVWVHDYHLMLLP 142 (456)
T ss_pred CceEEEEECCHHHHHHHHHHhhhhhcchhhcccccccccCHHHHHHHHHHHHHHHHHHHHhC-CCCCEEEEecchhhHHH
Confidence 445555555332 1 12356778876533 222333333333334444333221 12489999998777787
Q ss_pred HHHHhcC-CCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 322 ALLSGAL-NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 322 ~~l~~~~-~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
.++.+.. ..++.+..|-.++..- ++. ...+.+. -...+-.||.|-..|...++.+....
T Consensus 143 ~~lr~~~~~~~igfFlHipfP~~e--~f~-----------~lp~r~~---il~gll~~dligF~t~~~~~~Fl~~~---- 202 (456)
T TIGR02400 143 AMLRELGVQNKIGFFLHIPFPSSE--IYR-----------TLPWRRE---LLEGLLAYDLVGFQTYDDARNFLSAV---- 202 (456)
T ss_pred HHHHhhCCCCeEEEEEeCCCCChH--HHh-----------hCCcHHH---HHHHHhcCCEEEECCHHHHHHHHHHH----
Confidence 7777654 5688899997765331 000 0001111 12367899999999998888765532
Q ss_pred hHHHHHHHHh-HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEE
Q 001541 401 PVLERKLRAR-IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVIL 479 (1057)
Q Consensus 401 ~~~~~~l~~~-~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il 479 (1057)
.+.|... ...++...|+.. ++.+||||||++.|.+..... ........++..+ +++++|+
T Consensus 203 ---~~~l~~~~~~~~~~~~g~~~-~v~viP~GID~~~f~~~~~~~-------------~~~~~~~~lr~~~--~~~~vIl 263 (456)
T TIGR02400 203 ---SRELGLETLPNGVESGGRTV-RVGAFPIGIDVDRFAEQAKKP-------------SVQKRIAELRESL--KGRKLII 263 (456)
T ss_pred ---HHHhCCcccCCceEECCcEE-EEEEecCcCCHHHHHHHhcCh-------------hHHHHHHHHHHHc--CCCeEEE
Confidence 1222111 123444444444 899999999999997542110 1111122233333 4788999
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEe-----cCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 480 ALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMG-----NRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 480 ~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG-----~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
++||+++.||++.+++||+.+.+..+.. +++| ++| +++++++++....+..++++......++.+.+.+.+.
T Consensus 264 ~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~ 343 (456)
T TIGR02400 264 GVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRS 343 (456)
T ss_pred EccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCC
Confidence 9999999999999999999987655433 3444 343 3333334444333444444444445566677778889
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNGLLVDPHDQQSVADAL 627 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~P----VVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI 627 (1057)
++.+++.++|++| ||||+||..||||++++||||||+| +|+|+.+|..+.+. +|++|+|+|++++|+||
T Consensus 344 ~~~~el~aly~aa----Dv~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l~---~gllVnP~d~~~lA~aI 416 (456)
T TIGR02400 344 YDREELMALYRAA----DVGLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQELN---GALLVNPYDIDGMADAI 416 (456)
T ss_pred CCHHHHHHHHHhC----cEEEECccccccCccHHHHHHhcCCCCceEEEeCCCCChHHhC---CcEEECCCCHHHHHHHH
Confidence 9999999999999 9999999999999999999999999 89998887777663 79999999999999999
Q ss_pred HHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 628 LKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 628 ~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
.++|+ ++++++++.+..++++.+||+..|+++|++.+.
T Consensus 417 ~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 417 ARALTMPLEEREERHRAMMDKLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred HHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhh
Confidence 99999 567788888888999988999999999998764
|
This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib |
| >PRK10513 sugar phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=6.7e-29 Score=275.45 Aligned_cols=243 Identities=11% Similarity=0.091 Sum_probs=157.3
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|||++||||||. +.+++.++++|++++++ |+.|+|||||++.++.++++++++.. ..+++||+||+.|++.
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~~-~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAK----GVNVVLTTGRPYAGVHRYLKELHMEQ-PGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHC----CCEEEEecCCChHHHHHHHHHhCCCC-CCCeEEEcCCeEEEEC
Confidence 5899999999993 67999999999999987 99999999999999999999999842 1257999999999964
Q ss_pred cCCC--CCCCccccc-----cch------hhc--ccccch--hhHHHHH--HHhhhcccccccccccccccccccccCcc
Q 001541 851 TLNS--EDGPFVVDF-----YYH------SHI--EYRWGG--EGLRKTL--VRWASQVTDKKAESGEKVLTPAEQLSTNY 911 (1057)
Q Consensus 851 ~~~~--~~~~~~~d~-----~~~------~~i--~~~w~~--e~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 911 (1057)
.... ....+..+. .+. ..+ ...+.. ....... ..... ..... . ..+.+........
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~--~~~~~~~~~~~~~ 152 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLT-GIPLV--F--REVEKMDPNLQFP 152 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhc-cCCcc--c--cchhhccccCCce
Confidence 2111 000000000 000 000 000000 0000000 00000 00000 0 0000000011123
Q ss_pred eEEEEecCCCCCccHHHHHHHHHH-hcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCc
Q 001541 912 CYAFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDY 990 (1057)
Q Consensus 912 k~~~~~~~~~~~~~~~el~~~l~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~ 990 (1057)
|+... ..+ ..+.++.+.+.. ....+.++.+.+. ++||+|+++|||+||++|++++||++++++| |||+.| |
T Consensus 153 k~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~~eI~~~gvsKg~al~~l~~~~gi~~~~v~a-fGD~~N-D- 224 (270)
T PRK10513 153 KVMMI-DEP---EILDAAIARIPAEVKERYTVLKSAPY-FLEILDKRVNKGTGVKSLAEHLGIKPEEVMA-IGDQEN-D- 224 (270)
T ss_pred EEEEe-CCH---HHHHHHHHHhHHHhcCcEEEEEecCe-eEEEeCCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-
Confidence 33332 111 123344444432 2345777777775 8999999999999999999999999999999 888888 8
Q ss_pred cccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 991 EGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 991 ~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
++||+.+|+||||+||. .+.|..|+ +||.++++|||+++|+++.
T Consensus 225 i~Ml~~ag~~vAm~NA~--~~vK~~A~-----------------~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 225 IAMIEYAGVGVAMGNAI--PSVKEVAQ-----------------FVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHHHhCCceEEecCcc--HHHHHhcC-----------------eeccCCCcchHHHHHHHHh
Confidence 99999999999999999 43344444 5999999999999999975
|
|
| >TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=267.30 Aligned_cols=233 Identities=21% Similarity=0.387 Sum_probs=175.2
Q ss_pred EEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccC
Q 001541 776 IFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 852 (1057)
Q Consensus 776 Li~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~ 852 (1057)
||++|+||||. +.+++.+ ++++ +++ .|+.|++||||++.++.++++.+++. .||++||+||+.|++...
T Consensus 1 li~~DlDgTLl~~~~~~~~~~-~~~~-~~~----~gi~~viaTGR~~~~v~~~~~~l~l~--~~~~~I~~nGa~i~~~~~ 72 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFV-ELLR-GSG----DAVGFGIATGRSVESAKSRYAKLNLP--SPDVLIARVGTEIYYGPE 72 (236)
T ss_pred CeEEeccccccCCHHHHHHHH-HHHH-hcC----CCceEEEEeCCCHHHHHHHHHhCCCC--CCCEEEECCCceEEeCCC
Confidence 58999999994 4466655 6665 444 48999999999999999999999984 478899999999987542
Q ss_pred CCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHHH
Q 001541 853 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKV 932 (1057)
Q Consensus 853 ~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~ 932 (1057)
...+..|..++...|..+.+...+..+++.. .+.......++++|.. .++....+.++.+.
T Consensus 73 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~i~~~~-~~~~~~~~~~~~~~ 133 (236)
T TIGR02471 73 ------LQPDRFWQKHIDHDWRRQAVVEALADIPGLT------------LQDDQEQGPFKISYLL-DPEGEPILPQIRQR 133 (236)
T ss_pred ------CCCChhHHHHHhcCCCHHHHHHHHhcCCCcE------------eCChhcCCCeeEEEEE-CcccchHHHHHHHH
Confidence 2234556666777777655544443333221 1112223467787775 34333445677777
Q ss_pred HHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhh
Q 001541 933 LRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSN 1012 (1057)
Q Consensus 933 l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~ 1012 (1057)
+...+..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||+|+||. .+.
T Consensus 134 l~~~~~~~~~~~~~~~-~~ei~~~~~~K~~al~~l~~~~g~~~~~~i~-~GD~~n-D-~~ml~~~~~~iav~na~--~~~ 207 (236)
T TIGR02471 134 LRQQSQAAKVILSCGW-FLDVLPLRASKGLALRYLSYRWGLPLEQILV-AGDSGN-D-EEMLRGLTLGVVVGNHD--PEL 207 (236)
T ss_pred HHhccCCEEEEEECCc-eEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-EcCCcc-H-HHHHcCCCcEEEEcCCc--HHH
Confidence 7776667778888875 8999999999999999999999999999998 888888 8 99999999999999999 433
Q ss_pred hhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCc
Q 001541 1013 QIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054 (1057)
Q Consensus 1013 ~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~ 1054 (1057)
+..++. ...|||+++.++||+++|++|++
T Consensus 208 k~~a~~-------------~~~~v~~~~~~~Gv~~~i~~~~~ 236 (236)
T TIGR02471 208 EGLRHQ-------------QRIYFANNPHAFGILEGINHYDF 236 (236)
T ss_pred HHhhcC-------------CcEEEcCCCChhHHHHHHHhhCC
Confidence 444443 22357889999999999999985
|
Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472. |
| >cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor | Back alignment and domain information |
|---|
Probab=99.95 E-value=1e-27 Score=284.76 Aligned_cols=363 Identities=14% Similarity=0.132 Sum_probs=242.4
Q ss_pred CCeEEEEccCCCcc-----cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHH
Q 001541 252 SGAYIIRIPFGPKD-----KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDS 320 (1057)
Q Consensus 252 ~gv~i~rip~~p~~-----~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~ 320 (1057)
.++.++.++..+.. ....+..+||.+.. +....+....++-+...+.+...- ...|+||.|......+
T Consensus 67 ~~~~~~~v~l~~~~~~~~y~~f~~~~LWp~~H~~~~~~~~~~~~w~~Y~~vN~~fa~~i~~~~-~~~d~iwihDyhl~ll 145 (460)
T cd03788 67 GEYTVAPVFLSPEEFEGYYNGFSNEVLWPLFHYRLDLARFDREDWEAYVRVNRKFADAIAEVL-RPGDLVWVHDYHLLLL 145 (460)
T ss_pred CCceEEEeeCCHHHHHHHHHHhhhhhcchhhcCCCCccccCHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeChhhhHH
Confidence 45667776654321 12346778886533 233444444444444444443321 1369999999877777
Q ss_pred HHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCC
Q 001541 321 AALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGF 399 (1057)
Q Consensus 321 a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~ 399 (1057)
+.++.+. .+.|+++..|..++.... +.. ++. ...+ ...+..+|.|...+......+......
T Consensus 146 p~~lr~~~~~~~i~~f~HipfP~~e~--~~~--lp~-----~~~l-------l~~~l~~D~igF~t~~~~~~Fl~~~~~- 208 (460)
T cd03788 146 PQMLRERGPDARIGFFLHIPFPSSEI--FRC--LPW-----REEL-------LRGLLGADLIGFQTERYARNFLSCCSR- 208 (460)
T ss_pred HHHHHhhCCCCeEEEEEeCCCCChHH--Hhh--CCC-----hHHH-------HHHHhcCCEEEECCHHHHHHHHHHHHH-
Confidence 7766554 468999999987654411 100 000 0011 124556999999998766665543211
Q ss_pred ChHHHHHHHHh--HhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHh-hhCCCCCc
Q 001541 400 DPVLERKLRAR--IKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMR-FFTNPRKP 476 (1057)
Q Consensus 400 ~~~~~~~l~~~--~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 476 (1057)
.|... ...++...|+.. ++.+||||||.+.|.+.... +......++ ....++++
T Consensus 209 ------~l~~~~~~~~~i~~~g~~~-~i~vip~GID~~~f~~~~~~----------------~~~~~~~~~~~~~~~~~~ 265 (460)
T cd03788 209 ------LLGLEVTDDGGVEYGGRRV-RVGAFPIGIDPDAFRKLAAS----------------PEVQERAAELRERLGGRK 265 (460)
T ss_pred ------HcCCcccCCceEEECCEEE-EEEEEeCeEcHHHHHHHhcC----------------chhHHHHHHHHHhcCCCE
Confidence 10000 013444445433 79999999999998753211 111111111 22246789
Q ss_pred EEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcC-------CCCCE
Q 001541 477 VILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYD-------LYGQV 546 (1057)
Q Consensus 477 ~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~-------l~~~V 546 (1057)
+|+++||+++.||+..+|+||+.+.+..+.. +++| ++|.+..-+ . .+..++...+.+++.+++ +.+.+
T Consensus 266 ~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~~g~-~-~~~~~l~~~l~~~v~~in~~~g~~~~~~v~ 343 (460)
T cd03788 266 LIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPSRTD-V-PEYQELRREVEELVGRINGKFGTLDWTPVR 343 (460)
T ss_pred EEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCCCcC-c-HHHHHHHHHHHHHHHHHHhccCCCCceeEE
Confidence 9999999999999999999999987644432 3444 455432100 0 011234555666555542 44556
Q ss_pred EeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCc----EEEcCCCCchhhhhcCCceEEeCCCCHHH
Q 001541 547 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP----IVATKNGGPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 547 ~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~P----VVat~~Gg~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.|.|.++.+++.++|+.| |+||+||..||||++++||||||+| ||+|+.+|..+. +.+|++|+|+|+++
T Consensus 344 ~~~g~v~~~el~~~y~~a----Dv~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~---~~~g~lv~p~d~~~ 416 (460)
T cd03788 344 YLYRSLPREELAALYRAA----DVALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE---LSGALLVNPYDIDE 416 (460)
T ss_pred EEeCCCCHHHHHHHHHhc----cEEEeCccccccCcccceeEEEecCCCceEEEeccccchhh---cCCCEEECCCCHHH
Confidence 677899999999999999 9999999999999999999999999 999988887776 46899999999999
Q ss_pred HHHHHHHHHhCH-HHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 001541 623 VADALLKLVADK-QLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 623 la~aI~~ll~d~-~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~ 664 (1057)
++++|.++++++ ++++.+++++++.+.+|||..|+++|+..+
T Consensus 417 la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 417 VADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANSFLDDL 459 (460)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHhh
Confidence 999999999954 678888888899999999999999998764
|
It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain. |
| >cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.3e-26 Score=270.18 Aligned_cols=325 Identities=17% Similarity=0.184 Sum_probs=213.5
Q ss_pred CcceEEEEcCCCchHHHHHHH-hcCCCCEEEEecCCchhhHHHHHHhhhc--c-------hHHHHHHHHHHHHHHHHHHH
Q 001541 305 VWPVAIHGHYADAGDSAALLS-GALNVPMLFTGHSLGRDKLEQLLKQARL--S-------RDEINATYKIMRRIEAEELS 374 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~-~~~~iP~V~t~H~l~~~~~~~l~~~g~~--~-------~~~~~~~yk~~~ri~~E~~~ 374 (1057)
..+||+|+|.|.++..+..++ ...++|+|+|.|....... +..|.. . ....-..+.+..+...|+.+
T Consensus 147 ~~~dViH~HeWm~g~a~~~lK~~~~~VptVfTtHAT~~GR~---l~~g~~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~a 223 (590)
T cd03793 147 EPAVVAHFHEWQAGVGLPLLRKRKVDVSTIFTTHATLLGRY---LCAGNVDFYNNLDYFDVDKEAGKRGIYHRYCIERAA 223 (590)
T ss_pred CCCeEEEEcchhHhHHHHHHHHhCCCCCEEEEecccccccc---cccCCcccchhhhhcchhhhhhcccchHHHHHHHHH
Confidence 569999999999999999998 6689999999997643221 011110 0 00001112345666679999
Q ss_pred hhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCC
Q 001541 375 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 454 (1057)
Q Consensus 375 l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~ 454 (1057)
...||.|+++|+.+..+...+|+. +.++ |||||+|...|.+..... ..
T Consensus 224 a~~Ad~fttVS~it~~E~~~Ll~~----------------------~pd~--ViPNGid~~~f~~~~e~~--------~~ 271 (590)
T cd03793 224 AHCAHVFTTVSEITAYEAEHLLKR----------------------KPDV--VLPNGLNVKKFSALHEFQ--------NL 271 (590)
T ss_pred HhhCCEEEECChHHHHHHHHHhCC----------------------CCCE--EeCCCcchhhcccchhhh--------hh
Confidence 999999999999999888776543 3334 999999999987532110 00
Q ss_pred CCCCCCchHHH-----HHhhhCCCCCcEEEE-EeCCCC-CCCHHHHHHHHHhcccccC--CC--cEE-EE-EecC---CC
Q 001541 455 PASPDPPIWSE-----IMRFFTNPRKPVILA-LARPDP-KKNITTLVKAFGECRPLRE--LA--NLT-LI-MGNR---DG 518 (1057)
Q Consensus 455 ~~~~~~~~~~~-----~~~~~~~~~~~~Il~-vGRl~~-~Kgi~~Ll~A~~~l~~~~~--~~--~l~-LI-vG~~---~~ 518 (1057)
.+.....+... +.++...+++++++| +||+.+ .||++.+|+|+.++..... .. .++ +| +-.. -.
T Consensus 272 ~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeAl~rLn~~l~~~~~~~tVvafii~p~~~~~~~ 351 (590)
T cd03793 272 HAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEALARLNYLLKVEGSDTTVVAFFIMPAKTNNFN 351 (590)
T ss_pred hHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHHHHHHHHHHHhcCCCCeEEEEEEecCccCCcC
Confidence 11112222222 222344567888888 799999 9999999999999864211 11 232 33 3211 11
Q ss_pred Ccccchhh---------HHH--------------------------------------------------------HHHH
Q 001541 519 IDEMSSTS---------ASV--------------------------------------------------------LLSV 533 (1057)
Q Consensus 519 ~~~~~~~~---------~~~--------------------------------------------------------~~~l 533 (1057)
.+.++.+. .++ .+.|
T Consensus 352 ~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~i 431 (590)
T cd03793 352 VESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQRHSLPPVVTHNMVDDANDPI 431 (590)
T ss_pred HHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhccCCCCCeeeecCCcCccCHH
Confidence 11111110 000 0112
Q ss_pred HHHHHHcCCCC------CEEeC-CCCC------CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC
Q 001541 534 LKLIDKYDLYG------QVAYP-KHHK------QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600 (1057)
Q Consensus 534 ~~l~~~~~l~~------~V~f~-g~v~------~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G 600 (1057)
...+.+.+|.+ +|.|+ -+++ ..+..++|+.| |++|+||++||||++++||||||+|||+|+.+
T Consensus 432 l~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~----dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~ 507 (590)
T cd03793 432 LNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSITTNLS 507 (590)
T ss_pred HHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhc----eEEEeccccCCCCcHHHHHHHcCCCEEEccCc
Confidence 22233333322 13342 2332 23688999999 99999999999999999999999999999999
Q ss_pred Cc----hhhhhcC-CceEEeC-------CCCHHHHHHHHHHHHhCHHHHHHHHHHHH--HHhhcCCHHHHHHHHHHHHHc
Q 001541 601 GP----VDIHRVL-DNGLLVD-------PHDQQSVADALLKLVADKQLWARCRQNGL--KNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 601 g~----~eiv~~~-~~Gllv~-------p~d~~~la~aI~~ll~d~~~~~~~~~~~~--~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
|+ .|++.++ ..|++|. +.+.++|+++|.++++. +.++++.+.++ +..+.|+|+..+..|.+.+..
T Consensus 508 gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~m~~~~~~-~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~~ 586 (590)
T cd03793 508 GFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQLTQYMYEFCQL-SRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQL 586 (590)
T ss_pred chhhhhHHHhccCCCceEEEecCCccchHHHHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 98 5665544 3577776 45688999999998864 46666666655 555899999999999999976
Q ss_pred ccC
Q 001541 667 CKP 669 (1057)
Q Consensus 667 ~~~ 669 (1057)
.++
T Consensus 587 Al~ 589 (590)
T cd03793 587 ALS 589 (590)
T ss_pred Hhh
Confidence 543
|
GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity. |
| >COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.8e-26 Score=267.26 Aligned_cols=449 Identities=19% Similarity=0.207 Sum_probs=289.6
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCC------C
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP------R 239 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~------~ 239 (1057)
|||++++.... +--.+||..-.+..|.++|++.| ++|.|+.+.+. .+...+....+.+.. .
T Consensus 1 M~Il~v~~E~~---------p~vK~GGLaDv~~alpk~L~~~g--~~v~v~lP~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (487)
T COG0297 1 MKILFVASEIF---------PFVKTGGLADVVGALPKALAKRG--VDVRVLLPSYP--KVQKEWRDLLKVVGKFGVLKGG 67 (487)
T ss_pred Ccceeeeeeec---------CccccCcHHHHHHHhHHHHHhcC--CeEEEEcCCch--hhhhhhccccceeeEeeeeecc
Confidence 78999886554 22589999999999999999999 99999988763 222222211111000 0
Q ss_pred CCCccccccCC-CCCeEEEEccCCCccccccc--ccCCCChhHHHHHHHHHHHHHHHHHHhhhcC-CCCCcceEEEEcCC
Q 001541 240 NSDDFMDDMGE-SSGAYIIRIPFGPKDKYIAK--ELLWPHIPEFVDGALNHIIRMSNVLGEQIGG-GKPVWPVAIHGHYA 315 (1057)
Q Consensus 240 ~~~~~~~~~~~-~~gv~i~rip~~p~~~~l~k--~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~-~~~~~pDvIh~h~~ 315 (1057)
....+..+... ..++.+.-+.. + .+..+ ...+.+-+... ++.. ..++..+.+.. .....|||||+|.|
T Consensus 68 ~~~~~~~~~~~~~~~v~~~lid~-~--~~f~r~~~~~~~~~d~~~----Rf~~-F~~a~~~~~~~~~~~~~pDIvH~hDW 139 (487)
T COG0297 68 RAQLFIVKEYGKDGGVDLYLIDN-P--ALFKRPDSTLYGYYDNAE----RFAF-FSLAAAELAPLGLISWLPDIVHAHDW 139 (487)
T ss_pred cceEEEEEeecccCCCcEEEecC-h--hhcCccccccCCCCcHHH----HHHH-HHHHHHHHhhhcCCCCCCCEEEeecH
Confidence 00000011111 11133333321 1 12222 12333332222 2111 12222222211 11146999999999
Q ss_pred CchHHHHHHHh----cCCCCEEEEecCCchhhHHH--HHHhhhcchHHHHHHH--HHHHHHHHHHHHhhcCCEEEecCHH
Q 001541 316 DAGDSAALLSG----ALNVPMLFTGHSLGRDKLEQ--LLKQARLSRDEINATY--KIMRRIEAEELSLDASEIVITSTRQ 387 (1057)
Q Consensus 316 ~~~~~a~~l~~----~~~iP~V~t~H~l~~~~~~~--l~~~g~~~~~~~~~~y--k~~~ri~~E~~~l~~ad~Vi~~S~~ 387 (1057)
.++.+..+++. ...+|.|+|+|++....... ....-.++..... .+ ...-.+..++-.+..||.|.++|..
T Consensus 140 qt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~-~~~l~~~~~~~~lK~gi~~ad~vttVSpt 218 (487)
T COG0297 140 QTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYA-SFGLEFYGQISFLKGGLYYADAVTTVSPT 218 (487)
T ss_pred HHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhh-hceeeecCcchhhhhhheeccEEEEECHH
Confidence 99999999988 45799999999985543221 1111111111111 00 0001223466789999999999999
Q ss_pred HHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHH-
Q 001541 388 EIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEI- 466 (1057)
Q Consensus 388 ~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 466 (1057)
.+++++ ...+...+...|+.+. | ++.-|-||+|.+.+.|....... ..+....-.........+
T Consensus 219 Ya~Ei~--t~~~g~gl~g~l~~~~-----~------~l~GI~NgiD~~~wnp~~d~~~~--~~y~~~~~~~k~~nk~~L~ 283 (487)
T COG0297 219 YAGEIY--TPEYGEGLEGLLSWRS-----G------KLSGILNGIDYDLWNPETDPYIA--ANYSAEVLPAKAENKVALQ 283 (487)
T ss_pred HHHhhc--cccccccchhhhhhcc-----c------cEEEEEeeEEecccCcccccchh--ccCCccchhhhHHHHHHHH
Confidence 998887 2333333334443333 2 88999999999999876533110 000000000111222223
Q ss_pred HhhhCC--CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCC
Q 001541 467 MRFFTN--PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 467 ~~~~~~--~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~ 544 (1057)
.+++.. .+.|++.++||+..+||++.+++++..+.+.. ..+ +++|.++ ..+.+.+..++.++..
T Consensus 284 ~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~~-vilG~gd---------~~le~~~~~la~~~~~-- 349 (487)
T COG0297 284 ERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQL-VLLGTGD---------PELEEALRALASRHPG-- 349 (487)
T ss_pred HHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ceE-EEEecCc---------HHHHHHHHHHHHhcCc--
Confidence 334433 26799999999999999999999999998643 222 5778883 3467788888888864
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--------CCceEEeC
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--------LDNGLLVD 616 (1057)
Q Consensus 545 ~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--------~~~Gllv~ 616 (1057)
++...-..+..-...+|+.| |++++||.+||||++-++||.+|++.|+..+||.+|.|.+ ..+|+++.
T Consensus 350 ~~~~~i~~~~~la~~i~aga----D~~lmPSrfEPcGL~ql~amryGtvpIv~~tGGLadTV~~~~~~~~~~~gtGf~f~ 425 (487)
T COG0297 350 RVLVVIGYDEPLAHLIYAGA----DVILMPSRFEPCGLTQLYAMRYGTLPIVRETGGLADTVVDRNEWLIQGVGTGFLFL 425 (487)
T ss_pred eEEEEeeecHHHHHHHHhcC----CEEEeCCcCcCCcHHHHHHHHcCCcceEcccCCccceecCccchhccCceeEEEEe
Confidence 56655555556677888888 9999999999999999999999999999999999999875 47899999
Q ss_pred CCCHHHHHHHHHHHHh---CHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 001541 617 PHDQQSVADALLKLVA---DKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 671 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~---d~~~-~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~ 671 (1057)
+.++++++.+|.+++. .++. |+.+..+++. ..|+|+..+++|.++|+.++...
T Consensus 426 ~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~lY~~~~~~~ 482 (487)
T COG0297 426 QTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVELYKPLLSKP 482 (487)
T ss_pred cCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHHHHHHHhccc
Confidence 9999999999999887 4444 8888888877 79999999999999999987643
|
|
| >PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-27 Score=264.40 Aligned_cols=244 Identities=13% Similarity=0.108 Sum_probs=159.9
Q ss_pred CcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEE
Q 001541 772 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLY 848 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~ 848 (1057)
+.+++||+||||||. +.+++.++++|++++++ |+.|+|||||++.++.+++++++++ .+++||+||+.||
T Consensus 5 ~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~~~~l~~~---~~~~I~~NGa~I~ 77 (271)
T PRK03669 5 QDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREA----QVPVILCSSKTAAEMLPLQQTLGLQ---GLPLIAENGAVIQ 77 (271)
T ss_pred CCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHhCCC---CCcEEEeCCCEEE
Confidence 567999999999994 45788999999999987 9999999999999999999999983 1469999999999
Q ss_pred eccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhc---cccccccc-c------ccccc----ccccccCcceEE
Q 001541 849 YSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAES-G------EKVLT----PAEQLSTNYCYA 914 (1057)
Q Consensus 849 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~~~~~~~~-~------~~~~~----~~~~~~~~~k~~ 914 (1057)
..........+ ..+ ......+.+..++...... ........ . ..... .........++.
T Consensus 78 ~~~~~~~~~~~---~~~----~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (271)
T PRK03669 78 LDEQWQDHPDF---PRI----ISGISHGEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLI 150 (271)
T ss_pred ecCcccCCCCc---eEe----ecCCCHHHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeE
Confidence 76321100000 000 1111122222222111100 00000000 0 00000 000000112222
Q ss_pred EEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC---CcccEEEEecCCCCCCcc
Q 001541 915 FSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV---ELSKMVVFVGESGDTDYE 991 (1057)
Q Consensus 915 ~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI---~~e~viaf~GD~~n~D~~ 991 (1057)
+. .. ...+.++.+.+... .++++. .+. ++||+|+++|||+||++|++++|| +++++|| |||+.| | +
T Consensus 151 ~~-~~---~~~~~~~~~~l~~~--~~~~~~-~~~-~iEi~~~g~sKg~al~~l~~~lgi~~~~~~~via-fGDs~N-D-i 219 (271)
T PRK03669 151 WR-DS---DERMAQFTARLAEL--GLQFVQ-GAR-FWHVLDASAGKDQAANWLIATYQQLSGTRPTTLG-LGDGPN-D-A 219 (271)
T ss_pred ec-CC---HHHHHHHHHHHHHC--CCEEEe-cCe-eEEEecCCCCHHHHHHHHHHHHHhhcCCCceEEE-EcCCHH-H-H
Confidence 22 11 12344566666542 456554 333 899999999999999999999999 9999999 888888 8 9
Q ss_pred ccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 992 GLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 992 eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
+||+.+|+||||||+....+ -++..+..++|+|...++|||+++|+||.
T Consensus 220 ~Ml~~ag~gvAM~~~~~~~~-------------~l~~~~~~~~~~~~~~~~~g~~~~l~~~~ 268 (271)
T PRK03669 220 PLLDVMDYAVVVKGLNREGV-------------HLQDDDPARVYRTQREGPEGWREGLDHFF 268 (271)
T ss_pred HHHHhCCEEEEecCCCCCCc-------------ccccccCCceEeccCCCcHHHHHHHHHHH
Confidence 99999999999999872211 12234567889999999999999999974
|
|
| >PHA01630 putative group 1 glycosyl transferase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.9e-26 Score=261.92 Aligned_cols=254 Identities=13% Similarity=0.083 Sum_probs=186.0
Q ss_pred EcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHH-hhcCCEEEecCHHHHH
Q 001541 312 GHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELS-LDASEIVITSTRQEIE 390 (1057)
Q Consensus 312 ~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~-l~~ad~Vi~~S~~~~~ 390 (1057)
.|+.......+......|+|+|++.|+..+ +.+. .+.+. .+.+|.|+++|+...+
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~~v~e~~~~~~----------------------l~~~--~~~~~~~~~ad~ii~~S~~~~~ 107 (331)
T PHA01630 52 YYTIFNSMLFWKGIPHVGKNIVFEVADTDA----------------------ISHT--ALYFFRNQPVDEIVVPSQWSKN 107 (331)
T ss_pred ehhhhhHHHHHhhccccCCceEEEEEeech----------------------hhHH--HHHHHhhccCCEEEECCHHHHH
Confidence 555445555555556679999999998421 1111 13345 6889999999998777
Q ss_pred HHHhhhCCCChHHHHHHHHhHhccccccCCC-CCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhh
Q 001541 391 EQWRLYDGFDPVLERKLRARIKRNVSCYGKF-MPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRF 469 (1057)
Q Consensus 391 ~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~-~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 469 (1057)
.+.... .. ..++.|||||+|.+.|.+....
T Consensus 108 ~l~~~g-----------------------~~~~~~i~vIpNGVd~~~f~~~~~~-------------------------- 138 (331)
T PHA01630 108 AFYTSG-----------------------LKIPQPIYVIPHNLNPRMFEYKPKE-------------------------- 138 (331)
T ss_pred HHHHcC-----------------------CCCCCCEEEECCCCCHHHcCCCccc--------------------------
Confidence 653321 11 1379999999999888643211
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe
Q 001541 470 FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 548 (1057)
Q Consensus 470 ~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f 548 (1057)
..+..++++.|++.++||++.||+|+..+.+. .+++.+ ++|++.. + .++ .++.+ +
T Consensus 139 --~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~--~~~~~llivG~~~~--~---------~~l------~~~~~---~ 194 (331)
T PHA01630 139 --KPHPCVLAILPHSWDRKGGDIVVKIFHELQNE--GYDFYFLIKSSNML--D---------PRL------FGLNG---V 194 (331)
T ss_pred --cCCCEEEEEeccccccCCHHHHHHHHHHHHhh--CCCEEEEEEeCccc--c---------hhh------ccccc---e
Confidence 12345666778899999999999999998743 345554 6775432 1 011 12222 3
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCC-----------
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP----------- 617 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p----------- 617 (1057)
.+.++.+++..+|+.| |+||+||..|+||++++||||||+|||+|+.||..|++.++.||+++++
T Consensus 195 ~~~v~~~~l~~~y~~a----Dv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~ 270 (331)
T PHA01630 195 KTPLPDDDIYSLFAGC----DILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNP 270 (331)
T ss_pred eccCCHHHHHHHHHhC----CEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCC
Confidence 4568889999999999 9999999999999999999999999999999999999999888777642
Q ss_pred --------CCHHHHHHHHHHHHhCH--H-HHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 618 --------HDQQSVADALLKLVADK--Q-LWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 618 --------~d~~~la~aI~~ll~d~--~-~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
.|.+++++++.+++.++ + .++.+.++++...++|||+.++++|+++|++
T Consensus 271 ~~~G~~v~~~~~~~~~~ii~~l~~~~~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~~ 330 (331)
T PHA01630 271 IHVGYFLDPDIEDAYQKLLEALANWTPEKKKENLEGRAILYRENYSYNAIAKMWEKILEK 330 (331)
T ss_pred cccccccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhc
Confidence 37888999999999863 4 4445555555555899999999999999974
|
|
| >PLN02887 hydrolase family protein | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=280.94 Aligned_cols=236 Identities=13% Similarity=0.110 Sum_probs=157.6
Q ss_pred CcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCC-------eEEe
Q 001541 772 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFD-------AFIC 841 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D-------~lI~ 841 (1057)
...|+||+||||||. +.+++.++++|++++++ |+.|+|||||++.++.++++++++. .++ ++||
T Consensus 306 ~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ek----Gi~~vIATGR~~~~i~~~l~~L~l~--~~~~~I~~~~p~I~ 379 (580)
T PLN02887 306 PKFSYIFCDMDGTLLNSKSQISETNAKALKEALSR----GVKVVIATGKARPAVIDILKMVDLA--GKDGIISESSPGVF 379 (580)
T ss_pred cCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHhCcc--cccceEeecccEEe
Confidence 457899999999993 67999999999999997 9999999999999999999999873 123 3567
Q ss_pred CCCcEEEeccCCCCCCCccccccchhhcccccchhhHHHHHHH---------------------------hhhccccccc
Q 001541 842 NSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVR---------------------------WASQVTDKKA 894 (1057)
Q Consensus 842 ~nGa~I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~---------------------------~~~~~~~~~~ 894 (1057)
+||+.||....... + ......+.+.+++.. ..........
T Consensus 380 ~NGA~I~d~~g~~I---------~----~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~ 446 (580)
T PLN02887 380 LQGLLVYGRQGREI---------Y----RSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKA 446 (580)
T ss_pred ecCeEEEECCCcEE---------E----EEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccc
Confidence 89999986432110 0 000011111111100 0000000000
Q ss_pred ccccccccccccccCcceEEEEecCCCCCccHHHHHHHHHH-hcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC
Q 001541 895 ESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV 973 (1057)
Q Consensus 895 ~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~l~~-~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI 973 (1057)
. ....+.+........|+.+.. .++ ....++.+.+.. ....++++.+.++ ++||+|+++|||.||++||+++||
T Consensus 447 ~-~i~~l~~~~~~~~i~Ki~~~~-~~e--~~~~~l~~~l~~~~~~~~~v~~S~~~-~lEI~p~gvSKG~ALk~L~e~lGI 521 (580)
T PLN02887 447 E-IMSSVDQLLAAADIQKVIFLD-TAE--GVSSVLRPYWSEATGDRANVVQAQPD-MLEIVPPGTSKGNGVKMLLNHLGV 521 (580)
T ss_pred c-ccCCHHHhhcccCeeEEEEEc-ChH--HHHHHHHHHHHHHhcCcEEEEEecCc-EEEEecCCCCHHHHHHHHHHHcCC
Confidence 0 000000000011233443331 111 112234444433 2346788888875 999999999999999999999999
Q ss_pred CcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 974 ELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 974 ~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
+++++|| |||+.| | ++||+.+|+|||||||. .+.|..|+ +||.++++|||+++|++|-
T Consensus 522 ~~eeviA-FGDs~N-D-IeMLe~AG~gVAMgNA~--eeVK~~Ad-----------------~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 522 SPDEIMA-IGDGEN-D-IEMLQLASLGVALSNGA--EKTKAVAD-----------------VIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred CHHHEEE-Eecchh-h-HHHHHHCCCEEEeCCCC--HHHHHhCC-----------------EEeCCCCcCHHHHHHHHhh
Confidence 9999999 888888 8 99999999999999999 33344444 5999999999999999873
|
|
| >PRK01158 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.1e-27 Score=252.89 Aligned_cols=225 Identities=17% Similarity=0.130 Sum_probs=155.2
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|+|++|+||||. +.+++.++++|++++++ |+.|+|||||++..+.++++.++++ +++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~i~~nGa~i~~~ 74 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKL----GIPVILATGNVLCFARAAAKLIGTS----GPVIAENGGVISVG 74 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCCC----CcEEEecCeEEEEc
Confidence 5899999999993 56899999999999986 9999999999999999999999983 57999999999975
Q ss_pred cCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHH
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 930 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~ 930 (1057)
... .. .+...+. .....+..+........ ..+..........++. ... . ...+++.
T Consensus 75 ~~~----~~----~~~~~~~------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~-~~~-~---~~~~~~~ 130 (230)
T PRK01158 75 FDG----KR----IFLGDIE------ECEKAYSELKKRFPEAS-----TSLTKLDPDYRKTEVA-LRR-T---VPVEEVR 130 (230)
T ss_pred CCC----CE----EEEcchH------HHHHHHHHHHHhccccc-----eeeecCCcccccceee-ecc-c---ccHHHHH
Confidence 211 00 1111111 11122211111100000 0000000000011111 111 1 1234556
Q ss_pred HHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhh
Q 001541 931 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 1010 (1057)
Q Consensus 931 ~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~ 1010 (1057)
+.+...+..+.++.+ .. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. .
T Consensus 131 ~~l~~~~~~~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~ 203 (230)
T PRK01158 131 ELLEELGLDLEIVDS-GF-AIHIKSPGVNKGTGLKKLAELMGIDPEEVAA-IGDSEN-D-LEMFEVAGFGVAVANAD--E 203 (230)
T ss_pred HHHHHcCCcEEEEec-ce-EEEEeeCCCChHHHHHHHHHHhCCCHHHEEE-ECCchh-h-HHHHHhcCceEEecCcc--H
Confidence 666554444555444 33 7999999999999999999999999999999 889999 9 99999999999999999 3
Q ss_pred hhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhCc
Q 001541 1011 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054 (1057)
Q Consensus 1011 ~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~ 1054 (1057)
+.|..+ .+||.++++|||+++|++|.+
T Consensus 204 ~vk~~a-----------------~~v~~~n~~~Gv~~~l~~~~~ 230 (230)
T PRK01158 204 ELKEAA-----------------DYVTEKSYGEGVAEAIEHLLL 230 (230)
T ss_pred HHHHhc-----------------ceEecCCCcChHHHHHHHHhC
Confidence 333333 369999999999999999864
|
|
| >cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.3e-26 Score=265.28 Aligned_cols=273 Identities=25% Similarity=0.325 Sum_probs=210.8
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.++|+|+++....... ..+......+.++++|+.......... ...+...++. ....+..+|.||++
T Consensus 98 ~~~diii~~~~~~~~~-~~~~~~~~~~~i~~~h~~~~~~~~~~~------~~~~~~~~~~------~~~~~~~~d~ii~~ 164 (372)
T cd04949 98 TKPDVFILDRPTLDGQ-ALLNMKKAAKVVVVLHSNHVSDNNDPV------HSLINNFYEY------VFENLDKVDGVIVA 164 (372)
T ss_pred CCCCEEEECCccccch-hHHhccCCceEEEEEChHHhCCccccc------ccccchhhHH------HHhChhhCCEEEEc
Confidence 4699999988644333 233444566788999975332211000 0001111211 12246889999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+...+... .++.+||+|++...+.+...
T Consensus 165 s~~~~~~l~~~~~~~-----------------------~~v~~ip~g~~~~~~~~~~~---------------------- 199 (372)
T cd04949 165 TEQQKQDLQKQFGNY-----------------------NPIYTIPVGSIDPLKLPAQF---------------------- 199 (372)
T ss_pred cHHHHHHHHHHhCCC-----------------------CceEEEcccccChhhcccch----------------------
Confidence 998877765544321 15899999999877654210
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
.....+.|+++||+.+.||++.+|+|+..+.+. .+++.| |+|.++. ...+..++..+++.
T Consensus 200 ------~~~~~~~i~~vgrl~~~K~~~~li~a~~~l~~~--~~~~~l~i~G~g~~-----------~~~~~~~~~~~~~~ 260 (372)
T cd04949 200 ------KQRKPHKIITVARLAPEKQLDQLIKAFAKVVKQ--VPDATLDIYGYGDE-----------EEKLKELIEELGLE 260 (372)
T ss_pred ------hhcCCCeEEEEEccCcccCHHHHHHHHHHHHHh--CCCcEEEEEEeCch-----------HHHHHHHHHHcCCc
Confidence 023567899999999999999999999999754 345554 7787764 34566677888999
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhhcCCceEEeCCCCHHH
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVLDNGLLVDPHDQQS 622 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G-g~~eiv~~~~~Gllv~p~d~~~ 622 (1057)
.+|.|.|+ .+++..+|+.| |++|+||..||||++++||||||+|||+++.+ |+.+++.++.+|++++++|+++
T Consensus 261 ~~v~~~g~--~~~~~~~~~~a----d~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~~~~G~lv~~~d~~~ 334 (372)
T cd04949 261 DYVFLKGY--TRDLDEVYQKA----QLSLLTSQSEGFGLSLMEALSHGLPVISYDVNYGPSEIIEDGENGYLVPKGDIEA 334 (372)
T ss_pred ceEEEcCC--CCCHHHHHhhh----hEEEecccccccChHHHHHHhCCCCEEEecCCCCcHHHcccCCCceEeCCCcHHH
Confidence 99999995 67899999999 99999999999999999999999999999987 8999999999999999999999
Q ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHH
Q 001541 623 VADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTY 660 (1057)
Q Consensus 623 la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~ 660 (1057)
++++|..++.+++.++++++++++.+++|||+.++++|
T Consensus 335 la~~i~~ll~~~~~~~~~~~~a~~~~~~~s~~~~~~~w 372 (372)
T cd04949 335 LAEAIIELLNDPKLLQKFSEAAYENAERYSEENVWEKW 372 (372)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHhcC
Confidence 99999999999999999999999998899999998764
|
In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra |
| >TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.4e-27 Score=254.48 Aligned_cols=218 Identities=15% Similarity=0.166 Sum_probs=151.9
Q ss_pred EEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCC
Q 001541 777 FVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 853 (1057)
Q Consensus 777 i~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~ 853 (1057)
|++||||||. +.+++.++++|++++++ |+.|+|||||++.++.++++.+++ ++++||+||+.|++....
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~~aTGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~~~~~ 72 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESV----GIPVVLVTGNSVQFARALAKLIGT----PDPVIAENGGEISYNEGM 72 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCchHHHHHHHHHhCC----CCeEEEecCcEEEeCCCC
Confidence 5899999993 56999999999999986 999999999999999999999997 468999999999986421
Q ss_pred CCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHHHH
Q 001541 854 SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVL 933 (1057)
Q Consensus 854 ~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~l 933 (1057)
...|...+...|....+........ ....+.......+++.+. . ..+.+...+
T Consensus 73 --------~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~----~---~~~~~~~~~ 125 (225)
T TIGR01482 73 --------DDIFLAYLEEEWFLDIVIAKTFPFS------------RLKVQYPRRASLVKMRYG----I---DVDTVREII 125 (225)
T ss_pred --------ceEEecccCHHHHHHHHHhcccchh------------hhccccccccceEEEeec----C---CHHHHHHHH
Confidence 1122222322222111111000000 000000011112222221 1 112334444
Q ss_pred HHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhh
Q 001541 934 RIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQ 1013 (1057)
Q Consensus 934 ~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~ 1013 (1057)
...+..+.+. +.+. ++||+|+++|||.||++|++++|++++++++ +||+.| | ++||+.+|+||||+||. .+.+
T Consensus 126 ~~~~~~~~~~-~~~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-~GD~~N-D-i~m~~~ag~~vam~Na~--~~~k 198 (225)
T TIGR01482 126 KELGLNLVAV-DSGF-DIHILPQGVNKGVAVKKLKEKLGIKPGETLV-CGDSEN-D-IDLFEVPGFGVAVANAQ--PELK 198 (225)
T ss_pred HhcCceEEEe-cCCc-EEEEeeCCCCHHHHHHHHHHHhCCCHHHEEE-ECCCHh-h-HHHHHhcCceEEcCChh--HHHH
Confidence 4434334333 4454 8999999999999999999999999999999 888999 9 99999999999999998 3334
Q ss_pred hhhcCCCCCCCCCcCCCCCeEEccCCCChHH----HHHHHHHhC
Q 001541 1014 IHANRSYPLSDVMPIDSPNIVQTPEDCTTSD----IRSSLEQLG 1053 (1057)
Q Consensus 1014 ~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dg----I~~aL~~~g 1053 (1057)
.+|+ +||.++.++| |+++|++||
T Consensus 199 ~~A~-----------------~vt~~~~~~G~~~~v~~~l~~~~ 225 (225)
T TIGR01482 199 EWAD-----------------YVTESPYGEGGAEAIGEILQAIG 225 (225)
T ss_pred HhcC-----------------eecCCCCCCcHHHHHHHHHHhhC
Confidence 4444 5999999999 999999987
|
catalyze the same reaction as SPP. |
| >PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=5.1e-25 Score=254.34 Aligned_cols=344 Identities=17% Similarity=0.143 Sum_probs=242.2
Q ss_pred eEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccc
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++++ ...||.++...+|+++|.++| |+|++++.... +. + .
T Consensus 2 ~~i~i~~---------------~g~gG~~~~~~~la~~L~~~g--~ev~vv~~~~~-~~----~-~-------------- 44 (357)
T PRK00726 2 KKILLAG---------------GGTGGHVFPALALAEELKKRG--WEVLYLGTARG-ME----A-R-------------- 44 (357)
T ss_pred cEEEEEc---------------CcchHhhhHHHHHHHHHHhCC--CEEEEEECCCc-hh----h-h--------------
Confidence 7888886 136899999999999999999 99999987431 00 0 0
Q ss_pred cccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHH
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLS 325 (1057)
Q Consensus 246 ~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~ 325 (1057)
..+..|+++++++..... ....+..+.... ..+..+.++.+.+.+ .+|||||+|.+..+..+.+++
T Consensus 45 --~~~~~g~~~~~~~~~~~~----~~~~~~~l~~~~-~~~~~~~~~~~~ik~-------~~pDvv~~~~~~~~~~~~~~~ 110 (357)
T PRK00726 45 --LVPKAGIEFHFIPSGGLR----RKGSLANLKAPF-KLLKGVLQARKILKR-------FKPDVVVGFGGYVSGPGGLAA 110 (357)
T ss_pred --ccccCCCcEEEEeccCcC----CCChHHHHHHHH-HHHHHHHHHHHHHHh-------cCCCEEEECCCcchhHHHHHH
Confidence 001137888888764321 111111111111 112233333333333 579999999876667777777
Q ss_pred hcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHH
Q 001541 326 GALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLER 405 (1057)
Q Consensus 326 ~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~ 405 (1057)
+..++|+|++.|+..... .+++.+..+|.+++++++.. .. .
T Consensus 111 ~~~~~p~v~~~~~~~~~~--------------------------~~r~~~~~~d~ii~~~~~~~---~~----~------ 151 (357)
T PRK00726 111 RLLGIPLVIHEQNAVPGL--------------------------ANKLLARFAKKVATAFPGAF---PE----F------ 151 (357)
T ss_pred HHcCCCEEEEcCCCCccH--------------------------HHHHHHHHhchheECchhhh---hc----c------
Confidence 888999999888643210 12345677899999887432 11 1
Q ss_pred HHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCC
Q 001541 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD 485 (1057)
Q Consensus 406 ~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~ 485 (1057)
+..++.+||||++.+.+.+... ..++...++.++|+++|+..
T Consensus 152 ---------------~~~~i~vi~n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~gg~~ 193 (357)
T PRK00726 152 ---------------FKPKAVVTGNPVREEILALAAP-----------------------PARLAGREGKPTLLVVGGSQ 193 (357)
T ss_pred ---------------CCCCEEEECCCCChHhhcccch-----------------------hhhccCCCCCeEEEEECCcH
Confidence 1238999999999876543110 01122245678899999998
Q ss_pred CCCCHHHHH-HHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHh
Q 001541 486 PKKNITTLV-KAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 486 ~~Kgi~~Ll-~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~A 564 (1057)
..|++..++ +|+.++... +...+++|+++. +.+.+..+ +++. |.|.|++ ++++++|..|
T Consensus 194 ~~~~~~~~l~~a~~~~~~~---~~~~~~~G~g~~------------~~~~~~~~-~~~~--v~~~g~~--~~~~~~~~~~ 253 (357)
T PRK00726 194 GARVLNEAVPEALALLPEA---LQVIHQTGKGDL------------EEVRAAYA-AGIN--AEVVPFI--DDMAAAYAAA 253 (357)
T ss_pred hHHHHHHHHHHHHHHhhhC---cEEEEEcCCCcH------------HHHHHHhh-cCCc--EEEeehH--hhHHHHHHhC
Confidence 888876665 999888531 333347788752 33444445 6663 9999996 7999999999
Q ss_pred hcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC--------chhhhhcCCceEEeCCCC--HHHHHHHHHHHHhCH
Q 001541 565 AKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG--------PVDIHRVLDNGLLVDPHD--QQSVADALLKLVADK 634 (1057)
Q Consensus 565 a~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~ 634 (1057)
|++|.++ .+++++|||++|+|||++..++ ..+.+.+.++|+++++.| +++++++|.++++++
T Consensus 254 ----d~~i~~~----g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~~~~~~~l~~~i~~ll~~~ 325 (357)
T PRK00726 254 ----DLVICRA----GASTVAELAAAGLPAILVPLPHAADDHQTANARALVDAGAALLIPQSDLTPEKLAEKLLELLSDP 325 (357)
T ss_pred ----CEEEECC----CHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcccCCHHHHHHHHHHHHcCH
Confidence 9999876 2689999999999999987643 235677778999999888 999999999999999
Q ss_pred HHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 635 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 635 ~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
+.+++|++++++..+.++...+++.++++++
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (357)
T PRK00726 326 ERLEAMAEAARALGKPDAAERLADLIEELAR 356 (357)
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHHHHHhh
Confidence 9999999999999999999999999988775
|
|
| >PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification [] | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.5e-26 Score=250.59 Aligned_cols=225 Identities=15% Similarity=0.206 Sum_probs=154.5
Q ss_pred EEEEecCCC---CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCC
Q 001541 777 FVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 853 (1057)
Q Consensus 777 i~~DiDGTL---~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~ 853 (1057)
||+|+|||| ...+++.++++|+.++++ |+.|+|||||++..+.++++++++. +++||+||+.|+.....
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~~~----~~~I~~nGa~i~~~~~~ 72 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEK----GIKLVIATGRSYSSIKRLLKELGID----DYFICSNGALIDDPKGK 72 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHT----TCEEEEECSSTHHHHHHHHHHTTHC----SEEEEGGGTEEEETTTE
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhccc----ceEEEEEccCcccccccccccccch----hhhcccccceeeecccc
Confidence 689999999 367999999999999987 9999999999999999999999983 68999999999443211
Q ss_pred CCCCCccccccchhhcccccchhhHHHHHHHhhhccccccccccc-----------------------ccc--ccccccc
Q 001541 854 SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGE-----------------------KVL--TPAEQLS 908 (1057)
Q Consensus 854 ~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~-----------------------~~~--~~~~~~~ 908 (1057)
. . +.. ....+.+..++................ ... .......
T Consensus 73 ~-----l----~~~----~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (254)
T PF08282_consen 73 I-----L----YEK----PIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDE 139 (254)
T ss_dssp E-----E----EEE----SB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCS
T ss_pred c-----c----hhh----heeccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccc
Confidence 0 0 000 011111111111110000000000000 000 0011223
Q ss_pred CcceEEEEecCCCCCccHHHHHHHHHHhc-CcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCC
Q 001541 909 TNYCYAFSVQKPGMTPPVKELRKVLRIQA-LRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGD 987 (1057)
Q Consensus 909 ~~~k~~~~~~~~~~~~~~~el~~~l~~~~-~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n 987 (1057)
...++.+. .++ ..+..+.+.+.... ..+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.|
T Consensus 140 ~i~ki~~~-~~~---~~~~~l~~~l~~~~~~~~~~~~~~~~-~lei~~~~vsK~~ai~~l~~~~~i~~~~~~~-~GD~~N 213 (254)
T PF08282_consen 140 EIFKILFF-PDP---EDLEQLREELKKKFPNLIDVVRSSPY-FLEITPKGVSKGSAIKYLLEYLGISPEDIIA-FGDSEN 213 (254)
T ss_dssp SESEEEEE-SCH---HHHHHHHHHHHHHHTTTEEEEEEETT-EEEEEETTSSHHHHHHHHHHHHTTSGGGEEE-EESSGG
T ss_pred cceeeecc-ccc---hhhhhhhhhhccccCcceeEEEeccc-ceEEeeCCCCHHHHHHHHhhhcccccceeEE-eecccc
Confidence 45566643 222 24556666666543 33477777776 9999999999999999999999999999999 788888
Q ss_pred CCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHH
Q 001541 988 TDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 988 ~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
| ++||+.+|+||||+||. .+.+.+|+ ++|.+++++||+++|
T Consensus 214 -D-~~Ml~~~~~~~am~na~--~~~k~~a~-----------------~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 214 -D-IEMLELAGYSVAMGNAT--PELKKAAD-----------------YITPSNNDDGVAKAI 254 (254)
T ss_dssp -G-HHHHHHSSEEEEETTS---HHHHHHSS-----------------EEESSGTCTHHHHHH
T ss_pred -c-HhHHhhcCeEEEEcCCC--HHHHHhCC-----------------EEecCCCCChHHHhC
Confidence 8 99999999999999999 44445555 488999999999986
|
This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A .... |
| >TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-26 Score=264.28 Aligned_cols=367 Identities=12% Similarity=0.109 Sum_probs=255.3
Q ss_pred CeEEEEccCCCcc-----cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHH
Q 001541 253 GAYIIRIPFGPKD-----KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSA 321 (1057)
Q Consensus 253 gv~i~rip~~p~~-----~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a 321 (1057)
++.+.+++..+.. ....+..+||.+-. |-...+....++-+.+++.+...- ..-|+|-.|......++
T Consensus 69 ~~~~~~v~l~~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~-~~~d~vWVhDYhL~llp 147 (487)
T TIGR02398 69 KLTAARIPLSKEQVDIFYHITSKEAFWPILHTFPERFQFREDDWQVFLKVNRAFAEAACLEA-AEGATVWVHDYNLWLVP 147 (487)
T ss_pred ceeEEEEeCCHHHHHHHHhhhhhccccccccCCccccCcCHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEecchhhHHH
Confidence 4566666664421 22456778886532 222333333333344444333221 12479999988777777
Q ss_pred HHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 322 ALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 322 ~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
..+.+. .+.++-|..|..++..-- +. .....+. -...+-.||.|=..|...+..+....
T Consensus 148 ~~LR~~~~~~~IgfFlHiPFPs~ei--fr-----------~LP~r~~---ll~glL~aDliGFqt~~y~~~Fl~~~---- 207 (487)
T TIGR02398 148 GYIRQLRPDLKIAFFHHTPFPSADV--FN-----------ILPWREQ---IIGSLLCCDYIGFHIPRYVENFVDAA---- 207 (487)
T ss_pred HHHHHhCCCCeEEEEeeCCCCChHH--Hh-----------hCCchHH---HHHHHhcCCeEEeCCHHHHHHHHHHH----
Confidence 777654 357889999987664311 00 0001111 12367789999999988887765532
Q ss_pred hHHHHHHHHhH----------------------hccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 001541 401 PVLERKLRARI----------------------KRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 458 (1057)
Q Consensus 401 ~~~~~~l~~~~----------------------~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~ 458 (1057)
.+.|..+. .-+|...|+.. ++.++|+|||++.|.+..... .
T Consensus 208 ---~r~lg~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~gr~v-~v~~~PiGID~~~f~~~~~~~-------------~ 270 (487)
T TIGR02398 208 ---RGLMPLQTVSRQNVDPRFITVGTALGEERMTTALDTGNRVV-KLGAHPVGTDPERIRSALAAA-------------S 270 (487)
T ss_pred ---HHHhCCccccccccccccccccccccccccccceeECCEEE-EEEEEECEecHHHHHHHhcCc-------------h
Confidence 22222111 11255556665 799999999999997532110 1
Q ss_pred CCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecC-----CCCcccchhhHHHH
Q 001541 459 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNR-----DGIDEMSSTSASVL 530 (1057)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG~~-----~~~~~~~~~~~~~~ 530 (1057)
.......+++.+ .++++|+++||+++.|||..+++||+++.+.+|.. +++| ++|.. ++++++..+..+..
T Consensus 271 ~~~~~~~lr~~~--~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v 348 (487)
T TIGR02398 271 IREMMERIRSEL--AGVKLILSAERVDYTKGILEKLNAYERLLERRPELLGKVTLVTACVPAASGMTIYDELQGQIEQAV 348 (487)
T ss_pred HHHHHHHHHHHc--CCceEEEEecccccccCHHHHHHHHHHHHHhCccccCceEEEEEeCCCcccchHHHHHHHHHHHHH
Confidence 122233344443 37899999999999999999999999998766654 4554 44443 44556777777777
Q ss_pred HHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCC----cEEEcCCCCchhhh
Q 001541 531 LSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL----PIVATKNGGPVDIH 606 (1057)
Q Consensus 531 ~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~----PVVat~~Gg~~eiv 606 (1057)
++|+....+.++.+.++|.+.++.+++.++|+.| ||+++||++|||||+++||+||+. |+|.|..+|..+.+
T Consensus 349 ~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~A----DV~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGaa~~l 424 (487)
T TIGR02398 349 GRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMA----DVMWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGAAVEL 424 (487)
T ss_pred HHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhC----CEEEECccccccCcchhhHHhhhcCCCCCEEEeccccchhhc
Confidence 7788888888999999999999999999999999 999999999999999999999977 88888877776554
Q ss_pred hcCCceEEeCCCCHHHHHHHHHHHHhCHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 607 RVLDNGLLVDPHDQQSVADALLKLVADKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 607 ~~~~~Gllv~p~d~~~la~aI~~ll~d~~~-~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
..+++|||+|++++|++|.++|++|.. +++..+..++.+..++...|++.|+..+..
T Consensus 425 ---~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 425 ---KGALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred ---CCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHhhh
Confidence 469999999999999999999997664 444455555666899999999999987753
|
Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise. |
| >PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.7e-26 Score=253.70 Aligned_cols=244 Identities=15% Similarity=0.192 Sum_probs=151.7
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|+||+||||||. +.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|+..
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~----G~~~~iaTGR~~~~~~~~~~~l~~~----~~~I~~NGa~i~d~ 74 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKTILPESLEALARAREA----GYKVIIVTGRHHVAIHPFYQALALD----TPAICCNGTYLYDY 74 (272)
T ss_pred ccEEEEeCCCceECCCCccCHHHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHhcCCC----CCEEEcCCcEEEec
Confidence 5899999999993 57999999999999997 9999999999999999999999983 36999999999964
Q ss_pred cCCC--CCCCccccc-----------cchhh--ccccc-chhhHHHHH--HHhhhccccccccccccccccc----cccc
Q 001541 851 TLNS--EDGPFVVDF-----------YYHSH--IEYRW-GGEGLRKTL--VRWASQVTDKKAESGEKVLTPA----EQLS 908 (1057)
Q Consensus 851 ~~~~--~~~~~~~d~-----------~~~~~--i~~~w-~~e~l~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~ 908 (1057)
.... ....+..+. ..... ....| ......... ..+.......... .-..+.+. ....
T Consensus 75 ~~~~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 153 (272)
T PRK10530 75 QAKKVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRP-TFTQVDSLAQAARQVN 153 (272)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhccc-ceEEcccHHHHHhhcC
Confidence 2111 000000000 00000 00000 000000000 0000000000000 00000000 0001
Q ss_pred CcceEEEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCC
Q 001541 909 TNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDT 988 (1057)
Q Consensus 909 ~~~k~~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~ 988 (1057)
..+++... .++ ....+++.+.+... ..+.+..+... ++||+|.++|||.||+++++++|++++++++ +||+.|
T Consensus 154 ~~~~i~~~--~~~-~~~~~~~~~~~~~~-~~~~~~~s~~~-~~ei~~~~~~K~~~l~~l~~~~gi~~~e~i~-~GD~~N- 226 (272)
T PRK10530 154 AIWKFALT--HED-LPQLQHFAKHVEHE-LGLECEWSWHD-QVDIARKGNSKGKRLTQWVEAQGWSMKNVVA-FGDNFN- 226 (272)
T ss_pred CcEEEEEe--cCC-HHHHHHHHHHHhhh-cCceEEEecCc-eEEEecCCCChHHHHHHHHHHcCCCHHHeEE-eCCChh-
Confidence 12232221 111 11223344444332 22445555554 8999999999999999999999999999999 899999
Q ss_pred CccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 989 DYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 989 D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
| ++||+.+|+|||||||. .+.+.. +++||+++++|||+++|+++-
T Consensus 227 D-i~m~~~ag~~vamgna~--~~lk~~-----------------Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 227 D-ISMLEAAGLGVAMGNAD--DAVKAR-----------------ADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred h-HHHHHhcCceEEecCch--HHHHHh-----------------CCEEEecCCCCcHHHHHHHHh
Confidence 9 99999999999999997 322323 336889999999999999874
|
|
| >PHA01633 putative glycosyl transferase group 1 | Back alignment and domain information |
|---|
Probab=99.94 E-value=2.8e-24 Score=241.84 Aligned_cols=221 Identities=12% Similarity=0.161 Sum_probs=164.1
Q ss_pred hhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCC
Q 001541 375 LDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 454 (1057)
Q Consensus 375 l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~ 454 (1057)
+.+.+.+|++|+...+.+... |+ +. .+ +||+|+|++.|.|....
T Consensus 90 m~~~~~vIavS~~t~~~L~~~------------------G~-----~~-~i-~I~~GVD~~~f~p~~~~----------- 133 (335)
T PHA01633 90 LLQDVKFIPNSKFSAENLQEV------------------GL-----QV-DL-PVFHGINFKIVENAEKL----------- 133 (335)
T ss_pred HhcCCEEEeCCHHHHHHHHHh------------------CC-----CC-ce-eeeCCCChhhcCccchh-----------
Confidence 344568999999877765432 21 11 23 57899999988753210
Q ss_pred CCCCCCchHHHHHhhhC-CCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EEecCCCCcccchhhHHHH
Q 001541 455 PASPDPPIWSEIMRFFT-NPRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRDGIDEMSSTSASVL 530 (1057)
Q Consensus 455 ~~~~~~~~~~~~~~~~~-~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-IvG~~~~~~~~~~~~~~~~ 530 (1057)
.+ ..+.++.. .++.++|+++||+.++||++.+++|+..+.+..+.. ++.+ ++|..
T Consensus 134 ----~~---~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~~-------------- 192 (335)
T PHA01633 134 ----VP---QLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISHK-------------- 192 (335)
T ss_pred ----hH---HHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcHH--------------
Confidence 00 11112221 146789999999999999999999999987544432 3455 44421
Q ss_pred HHHHHHHHHcCCCCCEEeC---CCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhh
Q 001541 531 LSVLKLIDKYDLYGQVAYP---KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHR 607 (1057)
Q Consensus 531 ~~l~~l~~~~~l~~~V~f~---g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~ 607 (1057)
...++++.++|.|. |+++.+++.++|+.| |+||+||..||||++++||||||+|||+++.||..|++.
T Consensus 193 -----~~~~l~l~~~V~f~g~~G~~~~~dl~~~y~~a----DifV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g 263 (335)
T PHA01633 193 -----QFTQLEVPANVHFVAEFGHNSREYIFAFYGAM----DFTIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTS 263 (335)
T ss_pred -----HHHHcCCCCcEEEEecCCCCCHHHHHHHHHhC----CEEEECCccccCCHHHHHHHHcCCCEEEccCCCceeecC
Confidence 13456777889998 566778999999999 999999999999999999999999999999999888643
Q ss_pred c------------------CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 001541 608 V------------------LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLS 662 (1057)
Q Consensus 608 ~------------------~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~ 662 (1057)
. ...|+++++.|+++|+++|.+++...+ ...+++++++.++.|+|+.++++|++
T Consensus 264 ~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~-~~~~~~~~~~~a~~f~~~~~~~~~~~ 335 (335)
T PHA01633 264 WQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQD-REERSMKLKELAKKYDIRNLYTRFLE 335 (335)
T ss_pred CccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccC-hhhhhHHHHHHHHhcCHHHHHHHhhC
Confidence 1 234678889999999999999966432 33347788888899999999999863
|
|
| >TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-25 Score=245.64 Aligned_cols=234 Identities=18% Similarity=0.110 Sum_probs=155.0
Q ss_pred EEEEEecCCCC--Cc-chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccC
Q 001541 776 IFVISVDCDST--TG-LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 852 (1057)
Q Consensus 776 Li~~DiDGTL~--~~-i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~ 852 (1057)
||++|+||||. .. +.+.++++|++++++ |+.|+|||||++..+.++++++++ ++++||+||+.|++.+.
T Consensus 1 li~~DlDGTll~~~~~~~~~~~~~i~~l~~~----g~~~~~~TgR~~~~~~~~~~~~~~----~~~~I~~NGa~i~~~~~ 72 (256)
T TIGR01486 1 WIFTDLDGTLLDPHGYDWGPAKEVLERLQEL----GIPVIPCTSKTAAEVEYLRKELGL----EDPFIVENGGAIYGPRG 72 (256)
T ss_pred CEEEcCCCCCcCCCCcCchHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC----CCcEEEcCCeEEEeCCC
Confidence 58999999993 22 445799999999987 899999999999999999999998 36899999999998642
Q ss_pred CCCCCCccccccchhhcccccchhhHHHHHHHhhhcc-ccccccccc---------cccc---ccccccCcceEEEEecC
Q 001541 853 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQV-TDKKAESGE---------KVLT---PAEQLSTNYCYAFSVQK 919 (1057)
Q Consensus 853 ~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~-~~~~~~~~~---------~~~~---~~~~~~~~~k~~~~~~~ 919 (1057)
... .+..| .+...|..+.+.+++..+.... ......... .... .........++ +.. +
T Consensus 73 ~~~-----~~~~~--~~~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~ 143 (256)
T TIGR01486 73 WFT-----EPEYP--VIALGIPYEKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSET-ILW-S 143 (256)
T ss_pred ccc-----CCCeE--EEEcCCCHHHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCc-eec-C
Confidence 210 00001 1233344444444443221100 000000000 0000 00000111222 222 2
Q ss_pred CCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCC--cccEEEEecCCCCCCccccccCc
Q 001541 920 PGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVE--LSKMVVFVGESGDTDYEGLLGGV 997 (1057)
Q Consensus 920 ~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~--~e~viaf~GD~~n~D~~eML~~a 997 (1057)
++ .+..+.+.+... .+.+..+ +. ++||+|+++|||.||++|++++|++ .+++++ +||+.| | ++||+.+
T Consensus 144 ~~---~~~~~~~~~~~~--~~~~~~s-~~-~~ei~~~~~~Kg~ai~~l~~~~~i~~~~~~~~a-~GD~~N-D-~~Ml~~a 213 (256)
T TIGR01486 144 EE---RRERFTEALVEL--GLEVTHG-NR-FYHVLGAGSDKGKAANALKQFYNQPGGAIKVVG-LGDSPN-D-LPLLEVV 213 (256)
T ss_pred hH---HHHHHHHHHHHc--CCEEEeC-Cc-eEEEecCCCCHHHHHHHHHHHHhhcCCCceEEE-EcCCHh-h-HHHHHHC
Confidence 22 344566666543 3455554 33 8999999999999999999999999 999999 888888 8 9999999
Q ss_pred ceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCC---eEEccCCCChHHHHHHHHHh
Q 001541 998 HKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPN---IVQTPEDCTTSDIRSSLEQL 1052 (1057)
Q Consensus 998 g~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~---~~~vt~~~~~dgI~~aL~~~ 1052 (1057)
|+||||+||.+..+. .+.. ..+||.++++|||+++|++|
T Consensus 214 g~~vam~Na~~~~~~----------------lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 214 DLAVVVPGPNGPNVS----------------LKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred CEEEEeCCCCCCccc----------------cCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 999999999832111 1222 24799999999999999986
|
This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta |
| >cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis | Back alignment and domain information |
|---|
Probab=99.93 E-value=3.2e-24 Score=246.55 Aligned_cols=331 Identities=17% Similarity=0.163 Sum_probs=229.7
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
.+||..+++.+|+++|.+.| |+|+++|..... . .+ .....+++++++++...
T Consensus 8 ~~gG~~~~~~~la~~l~~~G--~ev~v~~~~~~~-~--------~~-------------~~~~~~~~~~~~~~~~~---- 59 (350)
T cd03785 8 GTGGHIFPALALAEELRERG--AEVLFLGTKRGL-E--------AR-------------LVPKAGIPLHTIPVGGL---- 59 (350)
T ss_pred CchhhhhHHHHHHHHHHhCC--CEEEEEECCCcc-h--------hh-------------cccccCCceEEEEecCc----
Confidence 47899999999999999999 999999875310 0 00 00113678888876432
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
.+...+..+..+.. ++..+..+.+.+.+ .+||+||+|...++..+.++++..++|++++.|+..+..
T Consensus 60 ~~~~~~~~~~~~~~-~~~~~~~~~~~i~~-------~~pDvI~~~~~~~~~~~~~~a~~~~~p~v~~~~~~~~~~----- 126 (350)
T cd03785 60 RRKGSLKKLKAPFK-LLKGVLQARKILKK-------FKPDVVVGFGGYVSGPVGLAAKLLGIPLVIHEQNAVPGL----- 126 (350)
T ss_pred CCCChHHHHHHHHH-HHHHHHHHHHHHHh-------cCCCEEEECCCCcchHHHHHHHHhCCCEEEEcCCCCccH-----
Confidence 11111222211111 12222222333333 579999999876677777778888999998777643210
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
.+++.++.+|.|++.|+...+. +.+ .++.+|
T Consensus 127 ---------------------~~~~~~~~~~~vi~~s~~~~~~-------~~~---------------------~~~~~i 157 (350)
T cd03785 127 ---------------------ANRLLARFADRVALSFPETAKY-------FPK---------------------DKAVVT 157 (350)
T ss_pred ---------------------HHHHHHHhhCEEEEcchhhhhc-------CCC---------------------CcEEEE
Confidence 1223566799999999876543 111 289999
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA 507 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~ 507 (1057)
|||+|.+.+.+.. ...++..++++++|+++|+....|++.. +++|+..+.. +..
T Consensus 158 ~n~v~~~~~~~~~-----------------------~~~~~~~~~~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~--~~~ 212 (350)
T cd03785 158 GNPVREEILALDR-----------------------ERARLGLRPGKPTLLVFGGSQGARAINEAVPEALAELLR--KRL 212 (350)
T ss_pred CCCCchHHhhhhh-----------------------hHHhcCCCCCCeEEEEECCcHhHHHHHHHHHHHHHHhhc--cCe
Confidence 9999987665321 0223334567788989888777777765 4588888752 222
Q ss_pred cEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHH
Q 001541 508 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1057)
Q Consensus 508 ~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEA 587 (1057)
.+.+++|.+ + .+++.+.++.+ .++|.|.|++ +++.++|+.| |++|.++- +++++||
T Consensus 213 ~~~~i~G~g-~-----------~~~l~~~~~~~--~~~v~~~g~~--~~~~~~l~~a----d~~v~~sg----~~t~~Ea 268 (350)
T cd03785 213 QVIHQTGKG-D-----------LEEVKKAYEEL--GVNYEVFPFI--DDMAAAYAAA----DLVISRAG----ASTVAEL 268 (350)
T ss_pred EEEEEcCCc-c-----------HHHHHHHHhcc--CCCeEEeehh--hhHHHHHHhc----CEEEECCC----HhHHHHH
Confidence 333466776 2 24455555555 4689999996 8999999999 99998762 6899999
Q ss_pred HHcCCcEEEcCCCC--------chhhhhcCCceEEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHH
Q 001541 588 AAHGLPIVATKNGG--------PVDIHRVLDNGLLVDPH--DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHC 657 (1057)
Q Consensus 588 mA~G~PVVat~~Gg--------~~eiv~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1057)
|++|+|||+++.++ ..+.+.+..+|+++++. |+++++++|..++.+++.++++++++++.++.+.-++++
T Consensus 269 m~~G~Pvv~~~~~~~~~~~~~~~~~~l~~~g~g~~v~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~ 348 (350)
T cd03785 269 AALGLPAILIPLPYAADDHQTANARALVKAGAAVLIPQEELTPERLAAALLELLSDPERLKAMAEAARSLARPDAAERIA 348 (350)
T ss_pred HHhCCCEEEeecCCCCCCcHHHhHHHHHhCCCEEEEecCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 99999999987654 24666677899999987 899999999999999999999999999988888777665
Q ss_pred H
Q 001541 658 K 658 (1057)
Q Consensus 658 ~ 658 (1057)
+
T Consensus 349 ~ 349 (350)
T cd03785 349 D 349 (350)
T ss_pred h
Confidence 3
|
It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.8e-24 Score=244.21 Aligned_cols=327 Identities=18% Similarity=0.181 Sum_probs=220.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 269 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~ 269 (1057)
+||......+|+++|.++| |+|+++|+... .. . ......|+++++++..+..
T Consensus 10 ~~g~~~~~~~La~~L~~~g--~eV~vv~~~~~-~~--------~-------------~~~~~~g~~~~~i~~~~~~---- 61 (348)
T TIGR01133 10 TGGHIFPALAVAEELIKRG--VEVLWLGTKRG-LE--------K-------------RLVPKAGIEFYFIPVGGLR---- 61 (348)
T ss_pred cHHHHhHHHHHHHHHHhCC--CEEEEEeCCCc-ch--------h-------------cccccCCCceEEEeccCcC----
Confidence 5566666679999999999 99999986321 00 0 0011247888888764421
Q ss_pred cccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHH
Q 001541 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLK 349 (1057)
Q Consensus 270 k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1057)
...+...+..+ ...+..+.++.+.+.+ .+||+||+|.......+..+++..++|+|+..|+....
T Consensus 62 ~~~~~~~l~~~-~~~~~~~~~l~~~i~~-------~~pDvVi~~~~~~~~~~~~~~~~~~~p~v~~~~~~~~~------- 126 (348)
T TIGR01133 62 RKGSFRLIKTP-LKLLKAVFQARRILKK-------FKPDAVIGFGGYVSGPAGLAAKLLGIPLFHHEQNAVPG------- 126 (348)
T ss_pred CCChHHHHHHH-HHHHHHHHHHHHHHHh-------cCCCEEEEcCCcccHHHHHHHHHcCCCEEEECCCCCcc-------
Confidence 00110011110 1112222333333333 67999999987666677777788899998655533210
Q ss_pred hhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeC
Q 001541 350 QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 429 (1057)
Q Consensus 350 ~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIp 429 (1057)
. .+++.++.+|.+++.++...+.+ +..+||
T Consensus 127 --------------~-----~~~~~~~~~d~ii~~~~~~~~~~-------------------------------~~~~i~ 156 (348)
T TIGR01133 127 --------------L-----TNKLLSRFAKKVLISFPGAKDHF-------------------------------EAVLVG 156 (348)
T ss_pred --------------H-----HHHHHHHHhCeeEECchhHhhcC-------------------------------CceEEc
Confidence 0 12345778999999998654321 347999
Q ss_pred CCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCCc
Q 001541 430 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELAN 508 (1057)
Q Consensus 430 nGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~~ 508 (1057)
||++...+.+... ..++..+++.++|+++|+....|++.. +++|+..+.. ...+
T Consensus 157 n~v~~~~~~~~~~-----------------------~~~~~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~--~~~~ 211 (348)
T TIGR01133 157 NPVRQEIRSLPVP-----------------------RERFGLREGKPTILVLGGSQGAKILNELVPKALAKLAE--KGIQ 211 (348)
T ss_pred CCcCHHHhcccch-----------------------hhhcCCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhh--cCcE
Confidence 9998765532110 012334567789999998888888765 5588888753 2334
Q ss_pred EEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHH
Q 001541 509 LTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1057)
Q Consensus 509 l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAm 588 (1057)
+.+++|+++ ...+.+.+.++++...+.|. . .+++++|+.| |++|.++ | +++++|||
T Consensus 212 ~~~~~g~~~------------~~~l~~~~~~~~l~~~v~~~---~-~~~~~~l~~a----d~~v~~~---g-~~~l~Ea~ 267 (348)
T TIGR01133 212 IVHQTGKND------------LEKVKNVYQELGIEAIVTFI---D-ENMAAAYAAA----DLVISRA---G-ASTVAELA 267 (348)
T ss_pred EEEECCcch------------HHHHHHHHhhCCceEEecCc---c-cCHHHHHHhC----CEEEECC---C-hhHHHHHH
Confidence 433445442 24566777777876666665 2 3899999999 9999865 2 78999999
Q ss_pred HcCCcEEEcCCCC-------chhhhhcCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHH
Q 001541 589 AHGLPIVATKNGG-------PVDIHRVLDNGLLVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCK 658 (1057)
Q Consensus 589 A~G~PVVat~~Gg-------~~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~ 658 (1057)
++|+|+|+++.++ ..+++.++.+|+++++.| +++++++|.+++++++.+++|++++++++..+.-+++++
T Consensus 268 ~~g~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~~~~~~~i~~ 346 (348)
T TIGR01133 268 AAGVPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLLDPANLEAMAEAARKLAKPDAAKRIAE 346 (348)
T ss_pred HcCCCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHcCHHHHHHHHHHHHhcCCccHHHHHHh
Confidence 9999999998654 235788889999999877 999999999999999999999999998887666666554
|
RL J Bacteriol 1993 Mar;175(6):1841-3 |
| >TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily | Back alignment and domain information |
|---|
Probab=99.93 E-value=5.5e-25 Score=242.18 Aligned_cols=227 Identities=15% Similarity=0.130 Sum_probs=150.5
Q ss_pred EEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccC
Q 001541 776 IFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 852 (1057)
Q Consensus 776 Li~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~ 852 (1057)
||++||||||. +.+++.++++|++++++ |+.|+|||||++..+.++++++++. .++||+||+.|++...
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----G~~~~iaTGR~~~~~~~~~~~~~~~----~~~I~~NGa~i~~~~~ 72 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREK----GIKVVLATGRPYKEVKNILKELGLD----TPFITANGAAVIDDQG 72 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHC----CCeEEEEeCCCHHHHHHHHHHcCCC----CCEEEcCCcEEECCCC
Confidence 58999999993 56999999999999987 9999999999999999999999883 3799999999997632
Q ss_pred CCCCCCccccccchhhcccccchhhHHHHHHHhhhccc-----cccc-----------------ccccc-ccccc-cccc
Q 001541 853 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVT-----DKKA-----------------ESGEK-VLTPA-EQLS 908 (1057)
Q Consensus 853 ~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~-----~~~~-----------------~~~~~-~~~~~-~~~~ 908 (1057)
... + ......+.+.+++..+..... .... ..... .+... ....
T Consensus 73 ~~i---------~----~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T TIGR00099 73 EIL---------Y----KKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPD 139 (256)
T ss_pred CEE---------e----ecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhc
Confidence 110 0 000111111111111000000 0000 00000 00000 0001
Q ss_pred CcceEEEEecCCCCCccHHHHHHHHHH--hcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCC
Q 001541 909 TNYCYAFSVQKPGMTPPVKELRKVLRI--QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESG 986 (1057)
Q Consensus 909 ~~~k~~~~~~~~~~~~~~~el~~~l~~--~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~ 986 (1057)
...+......++ ...+++.+.+.. ....+.++.+.+. ++||+|+++|||.||++|++++|++++++++ +||+.
T Consensus 140 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~s~~~-~leI~~~~~~K~~~i~~~~~~~~~~~~~~~~-~GD~~ 214 (256)
T TIGR00099 140 DILKILLLFLDP---EDLDLLIEALNKLELEENVSVVSSGPY-SIEITAKGVSKGSALQSLAEALGISLEDVIA-FGDGM 214 (256)
T ss_pred ccceEEEEECCH---HHHHHHHHHhhhhhhcCCEEEEEecCc-eEEecCCCCChHHHHHHHHHHcCCCHHHEEE-eCCcH
Confidence 112222222111 233455555542 2345777777775 9999999999999999999999999999999 88888
Q ss_pred CCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHH
Q 001541 987 DTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 987 n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
| | ++||+.+|.+|||+||. .+.+..|+ +++.++++|||+++|
T Consensus 215 n-D-~~m~~~~~~~~a~~na~--~~~k~~a~-----------------~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 215 N-D-IEMLEAAGYGVAMGNAD--EELKALAD-----------------YVTDSNNEDGVALAL 256 (256)
T ss_pred H-h-HHHHHhCCceeEecCch--HHHHHhCC-----------------EEecCCCCcchhhhC
Confidence 8 8 99999999999999998 33333333 588999999999875
|
The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences. |
| >PRK10117 trehalose-6-phosphate synthase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.3e-23 Score=243.34 Aligned_cols=369 Identities=15% Similarity=0.152 Sum_probs=259.2
Q ss_pred CeEEEEccCCCcc-----cccccccCCCChhH------HHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHH
Q 001541 253 GAYIIRIPFGPKD-----KYIAKELLWPHIPE------FVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSA 321 (1057)
Q Consensus 253 gv~i~rip~~p~~-----~~l~k~~l~~~l~~------f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a 321 (1057)
++...+++..+.. ....+..+||.+-. |....+....+.-+.+++.+...- ..-|+|-.|......++
T Consensus 60 ~~~~~~v~L~~~~~~~yY~gfsn~~LWPlfHy~~~~~~~~~~~w~~Y~~VN~~FA~~v~~~~-~~~D~VWVHDYhL~llp 138 (474)
T PRK10117 60 NITWASFNLSEQDYDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWEGYLRVNALLADKLLPLL-KDDDIIWIHDYHLLPFA 138 (474)
T ss_pred CceEEEecCCHHHHHHHHhhhhhcchhhhhCCCCCccCcCHHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEeccHhhHHH
Confidence 4566666654321 22456778886532 222333333333344444333221 12489999988777777
Q ss_pred HHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCC
Q 001541 322 ALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFD 400 (1057)
Q Consensus 322 ~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~ 400 (1057)
..+.+. ...++-|..|-.++..- ++. .....+. -...+-.||.|=..|......+....
T Consensus 139 ~~LR~~~~~~~IgFFlHiPFPs~e--ifr-----------~LP~r~e---il~glL~aDlIGFqt~~y~rnFl~~~---- 198 (474)
T PRK10117 139 SELRKRGVNNRIGFFLHIPFPTPE--IFN-----------ALPPHDE---LLEQLCDYDLLGFQTENDRLAFLDCL---- 198 (474)
T ss_pred HHHHHhCCCCcEEEEEeCCCCChH--HHh-----------hCCChHH---HHHHHHhCccceeCCHHHHHHHHHHH----
Confidence 777544 45789999998776431 110 0001111 12367789999999988877765532
Q ss_pred hHHHHHHHHhHh--ccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEE
Q 001541 401 PVLERKLRARIK--RNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVI 478 (1057)
Q Consensus 401 ~~~~~~l~~~~~--~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~I 478 (1057)
.+.|+.... ..+...|+.. ++.++|.|||++.|...... +.......++..+ .++++|
T Consensus 199 ---~~~lg~~~~~~~~v~~~gr~v-~v~~~PigID~~~~~~~a~~--------------~~~~~~~~lr~~~--~~~~li 258 (474)
T PRK10117 199 ---SNLTRVTTRSGKSHTAWGKAF-RTEVYPIGIEPDEIAKQAAG--------------PLPPKLAQLKAEL--KNVQNI 258 (474)
T ss_pred ---HHHcCCcccCCCeEEECCeEE-EEEEEECeEcHHHHHHHhhc--------------hHHHHHHHHHHHc--CCCeEE
Confidence 222221111 1233345555 79999999999998632211 1122233444433 468899
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE-E-----ecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCC
Q 001541 479 LALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-M-----GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK 550 (1057)
Q Consensus 479 l~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~LI-v-----G~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g 550 (1057)
+.++|+|+.|||...++||+++.+.+|.. +++|+ + ++.++|+++..+..+..++|+....+.++.+..++..
T Consensus 259 lgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~psR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~ 338 (474)
T PRK10117 259 FSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQ 338 (474)
T ss_pred EEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCCCCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecC
Confidence 99999999999999999999998877665 45443 2 3445677888888999999999999999999888899
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc------CCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHH
Q 001541 551 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH------GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVA 624 (1057)
Q Consensus 551 ~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~------G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la 624 (1057)
.++++++.++|+.| ||+++||+.+|||||++||+|| |+.|++..+|+..++ ..+++|||+|.+++|
T Consensus 339 ~~~~~~l~alyr~A----Dv~lVTplRDGMNLVAkEyva~q~~~~~GvLILSefAGaA~~L----~~AllVNP~d~~~~A 410 (474)
T PRK10117 339 HFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL----TSALIVNPYDRDEVA 410 (474)
T ss_pred CCCHHHHHHHHHhc----cEEEecccccccccccchheeeecCCCCccEEEecccchHHHh----CCCeEECCCCHHHHH
Confidence 99999999999999 9999999999999999999999 667888888888777 358999999999999
Q ss_pred HHHHHHHhCHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCC
Q 001541 625 DALLKLVADKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 670 (1057)
Q Consensus 625 ~aI~~ll~d~~~-~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~ 670 (1057)
+||.++|++|.. +++..+..++.+..++...|++.|++.+..+...
T Consensus 411 ~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~~fL~~L~~~~~~ 457 (474)
T PRK10117 411 AALDRALTMPLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 457 (474)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHhhhc
Confidence 999999997554 4555555556669999999999999999887543
|
|
| >TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=229.37 Aligned_cols=211 Identities=15% Similarity=0.184 Sum_probs=146.8
Q ss_pred eEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEecc
Q 001541 775 HIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 851 (1057)
Q Consensus 775 kLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~ 851 (1057)
|+|++||||||. +.+++.++++|++++++ |+.|+|||||++..+..+++.+++. .++||+||+.|++..
T Consensus 2 k~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~----g~~~~~~TGR~~~~~~~~~~~l~~~----~~~i~~NGa~i~~~~ 73 (215)
T TIGR01487 2 KLVAIDIDGTLTEPNRMISERAIEAIRKAEKK----GIPVSLVTGNTVPFARALAVLIGTS----GPVVAENGGVIFYNK 73 (215)
T ss_pred cEEEEecCCCcCCCCcccCHHHHHHHHHHHHC----CCEEEEEcCCcchhHHHHHHHhCCC----CcEEEccCcEEEeCC
Confidence 699999999993 56999999999999986 8999999999999999999999883 379999999999864
Q ss_pred CCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHH
Q 001541 852 LNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRK 931 (1057)
Q Consensus 852 ~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~ 931 (1057)
.. . .+.. ....|....... ........ . ............ .. ...+.+++
T Consensus 74 ~~-----~----~~~~-~~~~~~~~~~~~--~~~~~~~~------------~--~~~~~~~~~~~~-~~---~~~~~~~~ 123 (215)
T TIGR01487 74 ED-----I----FLAN-MEEEWFLDEEKK--KRFPRDRL------------S--NEYPRASLVIMR-EG---KDVDEVRE 123 (215)
T ss_pred Cc-----E----EEec-ccchhhHHHhhh--hhhhhhhc------------c--cccceeEEEEec-CC---ccHHHHHH
Confidence 11 0 0000 000010000000 00000000 0 000011111121 11 23345666
Q ss_pred HHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhh
Q 001541 932 VLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSS 1011 (1057)
Q Consensus 932 ~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~ 1011 (1057)
.+... .+.+..+ +. ++||+|.+++||.||+++++++|++.+++++ +||+.| | ++||+.+|+||||+||. .+
T Consensus 124 ~l~~~--~~~~~~~-~~-~~ei~~~~~~K~~~i~~l~~~~~i~~~~~i~-iGDs~N-D-~~ml~~ag~~vam~na~--~~ 194 (215)
T TIGR01487 124 IIKER--GLNLVDS-GF-AIHIMKKGVDKGVGVEKLKELLGIKPEEVAA-IGDSEN-D-IDLFRVVGFKVAVANAD--DQ 194 (215)
T ss_pred HHHhC--CeEEEec-Cc-eEEEecCCCChHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHhCCCeEEcCCcc--HH
Confidence 66543 3454444 43 8999999999999999999999999999999 899999 9 99999999999999998 33
Q ss_pred hhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHH
Q 001541 1012 NQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 1012 ~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
.+..|+ +||.+++++||+++|
T Consensus 195 ~k~~A~-----------------~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 195 LKEIAD-----------------YVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHhCC-----------------EEcCCCCCchhhhhC
Confidence 333343 698999999999875
|
TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. |
| >PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.91 E-value=2.8e-23 Score=230.78 Aligned_cols=248 Identities=16% Similarity=0.147 Sum_probs=154.4
Q ss_pred cceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEe
Q 001541 773 RKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~ 849 (1057)
..|+||+||||||. +.+++.++++|++++++ |+.|+|||||++..+..+++.+++. +++||.||+.||+
T Consensus 3 ~~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~----Gi~~~iaTgR~~~~~~~~~~~l~l~----~~~i~~nGa~i~~ 74 (273)
T PRK00192 3 MKLLVFTDLDGTLLDHHTYSYEPAKPALKALKEK----GIPVIPCTSKTAAEVEVLRKELGLE----DPFIVENGAAIYI 74 (273)
T ss_pred cceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCCC----CCEEEEcCcEEEe
Confidence 37899999999994 46788999999999986 9999999999999999999999983 4799999999997
Q ss_pred ccCCCC---CCCccccccchhhcccccchhhHHHHHHHhhhc-c--ccccccc---c----cccccc--cccccCcceEE
Q 001541 850 STLNSE---DGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ-V--TDKKAES---G----EKVLTP--AEQLSTNYCYA 914 (1057)
Q Consensus 850 ~~~~~~---~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~-~--~~~~~~~---~----~~~~~~--~~~~~~~~k~~ 914 (1057)
.+.... ......+..| ........+.+.+++..+... . ....... . .....+ ........+..
T Consensus 75 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T PRK00192 75 PKNYFPFQPDGERLKGDYW--VIELGPPYEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSEP 152 (273)
T ss_pred cccccccCCccccccCCce--EEEcCCCHHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCCc
Confidence 542100 0000000001 111112233333333221110 0 0000000 0 000000 00001111111
Q ss_pred EEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCc-ccEEEEecCCCCCCcccc
Q 001541 915 FSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVEL-SKMVVFVGESGDTDYEGL 993 (1057)
Q Consensus 915 ~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~-e~viaf~GD~~n~D~~eM 993 (1057)
+.... . ....+.+.+.+...+ +.++.+ + .++||+|.+ |||.||++|++++|+++ +++++ +||+.| | ++|
T Consensus 153 ~~~~~-~-~~~~~~~~~~l~~~~--~~~~~~-~-~~~ei~~~~-~Kg~al~~l~~~~~i~~~~~v~~-~GDs~N-D-i~m 222 (273)
T PRK00192 153 FLWNG-S-EAAKERFEEALKRLG--LKVTRG-G-RFLHLLGGG-DKGKAVRWLKELYRRQDGVETIA-LGDSPN-D-LPM 222 (273)
T ss_pred eeecC-c-hHHHHHHHHHHHHcC--CEEEEC-C-eEEEEeCCC-CHHHHHHHHHHHHhccCCceEEE-EcCChh-h-HHH
Confidence 22111 1 123455666665433 444443 4 489999999 99999999999999999 99999 888888 8 999
Q ss_pred ccCcceEEEeCCCchhhhhh-hhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHH-hC
Q 001541 994 LGGVHKTVILKGICSSSSNQ-IHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQ-LG 1053 (1057)
Q Consensus 994 L~~ag~gVAMgNa~~~~~~~-~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~-~g 1053 (1057)
|+.+|++|||+||.+..... ..+++ ...++|.++.+|||+.+|++ ||
T Consensus 223 ~~~ag~~vam~NA~~~~k~~~~~~a~-------------~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 223 LEAADIAVVVPGPDGPNPPLLPGIAD-------------GEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred HHhCCeeEEeCCCCCCCcccCccccC-------------CceEEecCCCcHHHHHHHHHHHh
Confidence 99999999999999332100 11110 23445588999999999997 44
|
|
| >KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=3.6e-21 Score=232.65 Aligned_cols=528 Identities=14% Similarity=0.089 Sum_probs=345.0
Q ss_pred ceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 307 PVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 307 pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
-|+|-.|......+...+... ..+++-+..|+..+.... .......+.| -..+..++.+-..+
T Consensus 141 ~d~vwihdyhlmllp~~lr~~~~~~~ig~flhspfpssEi-------------~r~lp~r~eI---l~gll~~~~i~f~t 204 (732)
T KOG1050|consen 141 GDIVWIHDYHLMLLPQMLRERFNSAKIGFFLHSPFPSSEI-------------YRCLPVRKEI---LRGLLYDDLLGFHT 204 (732)
T ss_pred CCcEEEEcchhhccchhhhcccccceEEEeccCCCChHHH-------------HHhcccHHHH---HHhhhccCcccccc
Confidence 566666654333333344433 356666788877553211 0000011111 23567778777666
Q ss_pred HHHHHHHHhhhCCCChHHHHHHHHhHh-----ccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCC
Q 001541 386 RQEIEEQWRLYDGFDPVLERKLRARIK-----RNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDP 460 (1057)
Q Consensus 386 ~~~~~~~~~~y~~~~~~~~~~l~~~~~-----~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~ 460 (1057)
.+....+. ..+-|.|..... -||+-.|+.. .+..+|.|+|..+|.... ..+
T Consensus 205 ~d~arhFl-------s~c~R~l~~~~~s~~~~~~v~~rgr~~-~v~~~pigid~~r~v~~~----------------~~~ 260 (732)
T KOG1050|consen 205 DDYARHFL-------STCSRLLGLEVASKFPTAGVSGRGRDV-SVKALPIGIDVQRFVKLL----------------ELP 260 (732)
T ss_pred ccHHHHHH-------HHHHHHHHhhhhccCCcceEEecccee-eeeecccccchHHhhccc----------------cch
Confidence 65444332 233444444444 3566666665 788999999999987432 122
Q ss_pred chHHHHHhhhCC-CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEE-EE-----ecCCCCcccchhhHHHHH
Q 001541 461 PIWSEIMRFFTN-PRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IM-----GNRDGIDEMSSTSASVLL 531 (1057)
Q Consensus 461 ~~~~~~~~~~~~-~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~L-Iv-----G~~~~~~~~~~~~~~~~~ 531 (1057)
...+..+.+... .++++|+.++|+++.||+..-+.||+++....+.. ++.+ .+ +.+.++++++......+.
T Consensus 261 ~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~ 340 (732)
T KOG1050|consen 261 YVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVR 340 (732)
T ss_pred hHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEecCCcccchHHHHHHHHhHhhhh
Confidence 222222222222 47899999999999999999999999998765544 3433 22 233334456666666777
Q ss_pred HHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc--C--CcEEEcCCCCchhhhh
Q 001541 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH--G--LPIVATKNGGPVDIHR 607 (1057)
Q Consensus 532 ~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~--G--~PVVat~~Gg~~eiv~ 607 (1057)
++++........+.+.+...++..++.++|..| |++++.++.+|++++++|+.+| + .+.|.+..-|..+..+
T Consensus 341 rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Va----ev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~ 416 (732)
T KOG1050|consen 341 RINEKFGSASYQPVHSLLKDLPFLELLALYKVA----EVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLE 416 (732)
T ss_pred hhhhccCCcccceEEEeeccCCHHHHhhhHHhh----hheeecccccccchhhhHHHHhhcccCCceEEeeecccccccc
Confidence 788777777766667788999999999999999 9999999999999999999999 2 5555555444445533
Q ss_pred cCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHH-HHhhcCCHHHHHHHHHHHHHcccCCCC-CCCCCCCCCCCCC
Q 001541 608 VLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL-KNIHLFSWPEHCKTYLSRIAGCKPRHP-QWQRNDDGGETSE 685 (1057)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~-~~v~~fsw~~~a~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 685 (1057)
...++++|+|.++++.+|..++.+++...+++..-. +.+..++...|++.++..+.++-.... ..+..+
T Consensus 417 --d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~~~~~~~l~~~~~~~~~~~~~~~------- 487 (732)
T KOG1050|consen 417 --DAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWAKSFLQGLKRIWKVGFLGFRVTP------- 487 (732)
T ss_pred --ccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHHHHHHHhhhhhhhhccccccccc-------
Confidence 467899999999999999999997776555554433 333577888888888884443322211 011100
Q ss_pred CCCCCCccchhhhhccccccccCCCCCCCCCCCCCCcccCchhhhhhHHHHHHHHhhccccccccCCCCCCccccCCCCC
Q 001541 686 SDSPGDSLRDIQDISLNLKFSLDGEKSGASGNDDSLDSEGNVADRKSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAA 765 (1057)
Q Consensus 686 ~~s~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 765 (1057)
--....+++.|+
T Consensus 488 ---------------------------------------------~l~~~~~i~~y~----------------------- 499 (732)
T KOG1050|consen 488 ---------------------------------------------LLTAEHIVSDYK----------------------- 499 (732)
T ss_pred ---------------------------------------------ccChhHhhhhhh-----------------------
Confidence 001234666777
Q ss_pred cCCcccCcceEEEEEecCCCCCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHh-CCCCCCCCCeEEeCCC
Q 001541 766 KFPALRRRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS-GHLSPSDFDAFICNSG 844 (1057)
Q Consensus 766 ~~~~~~~~kkLi~~DiDGTL~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~-lgl~~~~~D~lI~~nG 844 (1057)
++.+|+|++|+|+|+....+..+...|+.|... ++..+.|++||....+..++.. .++ +++++||
T Consensus 500 -----~s~~rli~ldyd~t~~~~~~~~~~~~l~~L~~d---p~n~v~i~s~~~r~~l~~~~~~~~~l------gl~aEhG 565 (732)
T KOG1050|consen 500 -----KSKKRLILLDYDLTLIPPRSIKAISILKDLCSD---PKNIVYIVSGRGRSVLEKWFFGCKNL------GLAAEHG 565 (732)
T ss_pred -----hccceEEEecccccccCCCCchHHHHHHHHhcC---CCCeEEEEEccCchhhhhhccccccc------eeecccC
Confidence 678999999999999644444478888888887 7788889999999998776632 233 7899999
Q ss_pred cEEEeccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCC-
Q 001541 845 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMT- 923 (1057)
Q Consensus 845 a~I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~- 923 (1057)
.++..++.|.... .+.+|.... .+..+.+.++++++..+.+ ...+.|++++.+..
T Consensus 566 ~f~r~~~~w~~~~---~~~~w~~~v-----~~i~~~~~ert~GS~ie~k----------------~~~l~~hy~~ad~~~ 621 (732)
T KOG1050|consen 566 YFVRIPGKWETCV---LDLDWKDLV-----KDIFQYYTERTPGSYIERK----------------ETALVWHYRNADPEF 621 (732)
T ss_pred ceeccCCceeeec---ccccHHHHH-----HHHHHHHHhcCCCceeccc----------------CceEEEeeeccCcch
Confidence 9999876332111 222332222 2345666777888777665 34566777655322
Q ss_pred --ccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcc
Q 001541 924 --PPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 924 --~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag 998 (1057)
....++.+.|......+++..-. ..+||-|.|+|||.|...+...+.-+++.+++ .||.. || ++|+....
T Consensus 622 g~~qA~el~~~l~~~~~~~~v~~g~--~~Vev~~~gvsk~~~~~~~~~~~~~~~df~~c-~g~d~-tD-ed~~~~~~ 693 (732)
T KOG1050|consen 622 GELQAKELLEHLESKNEPVEVVRGK--HIVEVRPQGVSKGLAAERILSEMVKEPDFVLC-IGDDR-TD-EDMFEFIS 693 (732)
T ss_pred hHHHHHHHHHHhcccCCCeEEEecC--ceEEEcccccchHHHHHHHHHhcCCCcceEEE-ecCCC-Ch-HHHHHHHh
Confidence 23456666665523334444333 38999999999999999999999833344555 78844 48 99998753
|
|
| >PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.89 E-value=2.2e-21 Score=229.52 Aligned_cols=283 Identities=16% Similarity=0.203 Sum_probs=192.2
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+||++...........++..++|++++-|.+...... .|+...+ .++..++.+|.|++.
T Consensus 123 ~~Pd~v~~~~~~~~~~~l~~~~~~~ip~vl~~~~~~~~s~~---------------~~~~~~~--~~r~~~~~~d~ii~~ 185 (425)
T PRK05749 123 WRPKLVIIMETELWPNLIAELKRRGIPLVLANARLSERSFK---------------RYQKFKR--FYRLLFKNIDLVLAQ 185 (425)
T ss_pred hCCCEEEEEecchhHHHHHHHHHCCCCEEEEeccCChhhHH---------------HHHHHHH--HHHHHHHhCCEEEEC
Confidence 56999999854332333334567799999887755322211 1111122 244578899999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+.. +|.+.+ +.++||+ +++.+.+.. ......
T Consensus 186 S~~~~~~l~~-----------------------~g~~~~-i~vi~n~-~~d~~~~~~-----------------~~~~~~ 223 (425)
T PRK05749 186 SEEDAERFLA-----------------------LGAKNE-VTVTGNL-KFDIEVPPE-----------------LAARAA 223 (425)
T ss_pred CHHHHHHHHH-----------------------cCCCCC-cEecccc-cccCCCChh-----------------hHHHHH
Confidence 9987776433 232333 7788884 443332110 001111
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
..+..+. +++++|+++|+. .|+.+.+++|+..+... .+++.| |+|.+++. ..++.+++.++++.
T Consensus 224 ~~r~~~~-~~~~vil~~~~~--~~~~~~ll~A~~~l~~~--~~~~~liivG~g~~r----------~~~l~~~~~~~gl~ 288 (425)
T PRK05749 224 TLRRQLA-PNRPVWIAASTH--EGEEELVLDAHRALLKQ--FPNLLLILVPRHPER----------FKEVEELLKKAGLS 288 (425)
T ss_pred HHHHHhc-CCCcEEEEeCCC--chHHHHHHHHHHHHHHh--CCCcEEEEcCCChhh----------HHHHHHHHHhCCCc
Confidence 2222222 567889998874 68899999999998643 456664 67877641 25677888888875
Q ss_pred CCEEeCCCCC------------CCcHHHHHHHhhcCCcEEEE-cCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcC
Q 001541 544 GQVAYPKHHK------------QSDVPEIYRLAAKTKGVFIN-PAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVL 609 (1057)
Q Consensus 544 ~~V~f~g~v~------------~~dl~~ly~~Aa~~~dv~v~-ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~ 609 (1057)
.+.|.+... ..+++.+|+.| |++++ +|+.|++|++++||||||+|||+++. ++..++++..
T Consensus 289 -~~~~~~~~~~~~~~~v~l~~~~~el~~~y~~a----Di~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 289 -YVRRSQGEPPSADTDVLLGDTMGELGLLYAIA----DIAFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred -EEEccCCCCCCCCCcEEEEecHHHHHHHHHhC----CEEEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHH
Confidence 244444211 35899999999 99655 67889999999999999999999874 6666665542
Q ss_pred -CceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 001541 610 -DNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 610 -~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
.+|+++.|.|+++++++|.++++|++.+++|++++++.+... ....+++++.|....
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~~~~~~~~m~~~a~~~~~~~--~~~~~~~~~~l~~~l 421 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLTDPDARQAYGEAGVAFLKQN--QGALQRTLQLLEPYL 421 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhC--ccHHHHHHHHHHHhc
Confidence 468888899999999999999999999999999999999533 255666777666543
|
|
| >PRK13609 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=7.3e-21 Score=221.66 Aligned_cols=263 Identities=13% Similarity=0.079 Sum_probs=182.3
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+||++++.........+...++|++.+.++..... .+.++.+|.+++.
T Consensus 103 ~~pD~Vi~~~~~~~~~~~~~~~~~~ip~~~~~td~~~~~----------------------------~~~~~~ad~i~~~ 154 (380)
T PRK13609 103 EKPDIVINTFPIIAVPELKKQTGISIPTYNVLTDFCLHK----------------------------IWVHREVDRYFVA 154 (380)
T ss_pred hCcCEEEEcChHHHHHHHHHhcCCCCCeEEEeCCCCCCc----------------------------ccccCCCCEEEEC
Confidence 679999999875554444445567899887666543211 1357789999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+.+ +|.+..++.+++++++.. |.+.. ....
T Consensus 155 s~~~~~~l~~-----------------------~gi~~~ki~v~G~p~~~~-f~~~~-------------------~~~~ 191 (380)
T PRK13609 155 TDHVKKVLVD-----------------------IGVPPEQVVETGIPIRSS-FELKI-------------------NPDI 191 (380)
T ss_pred CHHHHHHHHH-----------------------cCCChhHEEEECcccChH-HcCcC-------------------CHHH
Confidence 9886665432 122334788876665432 32110 0112
Q ss_pred HHHhhhCCCCCcEE-EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 465 EIMRFFTNPRKPVI-LALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 465 ~~~~~~~~~~~~~I-l~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
.+.++...++++++ ++.|++...||+..+++++.+. +++.+ ++|++. ..+...+.+++..++
T Consensus 192 ~~~~~~l~~~~~~il~~~G~~~~~k~~~~li~~l~~~------~~~~~viv~G~~---------~~~~~~l~~~~~~~~- 255 (380)
T PRK13609 192 IYNKYQLCPNKKILLIMAGAHGVLGNVKELCQSLMSV------PDLQVVVVCGKN---------EALKQSLEDLQETNP- 255 (380)
T ss_pred HHHHcCCCCCCcEEEEEcCCCCCCcCHHHHHHHHhhC------CCcEEEEEeCCC---------HHHHHHHHHHHhcCC-
Confidence 33445555566654 5568888899999999988643 23443 343322 112455666666554
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-CCCch----hhhhcCCceEEeCC
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPV----DIHRVLDNGLLVDP 617 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-~Gg~~----eiv~~~~~Gllv~p 617 (1057)
.+|.|+|++ ++++++|+.| |++|. ++.|++++||||||+|||+++ .+|.. +.+. .+|+.+.+
T Consensus 256 -~~v~~~g~~--~~~~~l~~~a----D~~v~----~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~--~~G~~~~~ 322 (380)
T PRK13609 256 -DALKVFGYV--ENIDELFRVT----SCMIT----KPGGITLSEAAALGVPVILYKPVPGQEKENAMYFE--RKGAAVVI 322 (380)
T ss_pred -CcEEEEech--hhHHHHHHhc----cEEEe----CCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHH--hCCcEEEE
Confidence 579999996 5799999999 99874 567999999999999999986 55531 2333 24555556
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcc
Q 001541 618 HDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~ 667 (1057)
.|+++++++|.+++++++.+++|++++++....++++.+++.+++.+..+
T Consensus 323 ~~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 323 RDDEEVFAKTEALLQDDMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred CCHHHHHHHHHHHHCCHHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 79999999999999999999999999988878899999999999888644
|
|
| >COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.1e-21 Score=220.53 Aligned_cols=353 Identities=14% Similarity=0.144 Sum_probs=250.7
Q ss_pred cccccCCCChhHH------HHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcC-CCCEEEEecCCc
Q 001541 268 IAKELLWPHIPEF------VDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGAL-NVPMLFTGHSLG 340 (1057)
Q Consensus 268 l~k~~l~~~l~~f------~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~-~iP~V~t~H~l~ 340 (1057)
..+..|||-+-.+ .........++-+.+.+.+...- ..=|+|-.|.....++...+.... ..++.|..|-.+
T Consensus 104 fsn~iLWP~~Hy~~~~~~~~~~~w~~Y~~vN~~FAd~i~~~~-~~gDiIWVhDYhL~L~P~mlR~~~~~~~IgfFlHiPf 182 (486)
T COG0380 104 FSNAILWPLFHYFIDDVAYERNWWDAYVKVNRKFADKIVEIY-EPGDIIWVHDYHLLLVPQMLRERIPDAKIGFFLHIPF 182 (486)
T ss_pred hhHhhhcceeeeecCccccchHHHHHHHHHHHHHHHHHHHhc-CCCCEEEEEechhhhhHHHHHHhCCCceEEEEEeCCC
Confidence 3456677755332 23333333444444444333211 113899999876667776666544 467888999877
Q ss_pred hhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccC-
Q 001541 341 RDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYG- 419 (1057)
Q Consensus 341 ~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g- 419 (1057)
+..- ++ . ...+...| ...+-.||.|-..+...+..+.... .+.+......++..-|
T Consensus 183 PssE--vf----------r-~lP~r~eI---l~gll~~dligFqt~~y~~nF~~~~-------~r~~~~~~~~~~~~~~~ 239 (486)
T COG0380 183 PSSE--VF----------R-CLPWREEI---LEGLLGADLIGFQTESYARNFLDLC-------SRLLGVTGDADIRFNGA 239 (486)
T ss_pred CCHH--HH----------h-hCchHHHH---HHHhhcCCeeEecCHHHHHHHHHHH-------HHhcccccccccccccc
Confidence 6431 11 1 11111111 2367789999999988877665543 3333311122233221
Q ss_pred -CCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHH
Q 001541 420 -KFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFG 498 (1057)
Q Consensus 420 -~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~ 498 (1057)
....++..+|.|||+..|...... +.....+.++.+.+.. ++++|+.++|+|+.||+...+.||+
T Consensus 240 ~~~~v~v~a~PIgID~~~~~~~~~~-------------~~v~~~~~el~~~~~~-~~kiivgvDRlDy~kGi~~rl~Afe 305 (486)
T COG0380 240 DGRIVKVGAFPIGIDPEEFERALKS-------------PSVQEKVLELKAELGR-NKKLIVGVDRLDYSKGIPQRLLAFE 305 (486)
T ss_pred CCceEEEEEEeeecCHHHHHHhhcC-------------CchhhHHHHHHHHhcC-CceEEEEehhcccccCcHHHHHHHH
Confidence 233488999999999998743321 1222456667776643 3899999999999999999999999
Q ss_pred hcccccCCC--cEEEEE------ecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcE
Q 001541 499 ECRPLRELA--NLTLIM------GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGV 570 (1057)
Q Consensus 499 ~l~~~~~~~--~l~LIv------G~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv 570 (1057)
+|+..+|.. +++++. ++.+.++.+..+..+.+++|+....+.++.+.++|...++.+++.++|+.| |+
T Consensus 306 ~lL~~~Pe~~~kvvliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~a----Dv 381 (486)
T COG0380 306 RLLEEYPEWRGKVVLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAA----DV 381 (486)
T ss_pred HHHHhChhhhCceEEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhh----ce
Confidence 998766655 444422 333344457778888999999999999999988999999999999999999 99
Q ss_pred EEEcCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHH-HHHH
Q 001541 571 FINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARC-RQNG 644 (1057)
Q Consensus 571 ~v~ps~~Egfgl~~lEAmA~-----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~-~~~~ 644 (1057)
++++|+.|||+||+.|+.|| |..|++..+|+..++ ..+++|||+|.+++|++|.++|+++.+.++. -+..
T Consensus 382 ~lVtplrDGMNLvakEyVa~q~~~~G~LiLSeFaGaa~~L----~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~ 457 (486)
T COG0380 382 MLVTPLRDGMNLVAKEYVAAQRDKPGVLILSEFAGAASEL----RDALIVNPWDTKEVADAIKRALTMSLEERKERHEKL 457 (486)
T ss_pred eeeccccccccHHHHHHHHhhcCCCCcEEEeccccchhhh----ccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 99999999999999999999 888888889998888 3599999999999999999999966554444 4444
Q ss_pred HHHhhcCCHHHHHHHHHHHHHc
Q 001541 645 LKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 645 ~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
++.+..++...|+.+|+..+..
T Consensus 458 ~~~v~~~d~~~W~~~fl~~la~ 479 (486)
T COG0380 458 LKQVLTHDVARWANSFLDDLAQ 479 (486)
T ss_pred HHHHHhhhHHHHHHHHHHHHHh
Confidence 5556899999999999999886
|
|
| >PRK10187 trehalose-6-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-21 Score=215.18 Aligned_cols=195 Identities=10% Similarity=0.055 Sum_probs=133.2
Q ss_pred cceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCC
Q 001541 773 RKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 844 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nG 844 (1057)
.+.+|++|+||||. +.+++.++++|++|++. .|+.|+|+|||++..+.++++.+++ .+||+||
T Consensus 13 ~~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~---~g~~v~i~SGR~~~~~~~~~~~~~~------~~i~~nG 83 (266)
T PRK10187 13 ANYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATA---NDGALALISGRSMVELDALAKPYRF------PLAGVHG 83 (266)
T ss_pred CCEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhC---CCCcEEEEeCCCHHHHHHhcCcccc------eEEEeCC
Confidence 36899999999994 26889999999999984 4899999999999999999987765 4899999
Q ss_pred cEEEeccCCCCCCCccccccchhhcccccchhh---HHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCC
Q 001541 845 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEG---LRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG 921 (1057)
Q Consensus 845 a~I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~---l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 921 (1057)
++|+..+.. . +...+...|.... +++.+.+.++...+.+ ...++++++...
T Consensus 84 a~i~~~~~~-----~-----~~~~l~~~~~~~i~~~l~~~~~~~pg~~ve~k----------------~~~~~~h~r~~~ 137 (266)
T PRK10187 84 AERRDINGK-----T-----HIVHLPDAIARDISVQLHTALAQLPGAELEAK----------------GMAFALHYRQAP 137 (266)
T ss_pred CeeecCCCC-----e-----eeccCChhHHHHHHHHHHHHhccCCCcEEEeC----------------CcEEEEECCCCC
Confidence 999865311 0 1111222221111 1111222223333222 234445554332
Q ss_pred C-CccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc---
Q 001541 922 M-TPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV--- 997 (1057)
Q Consensus 922 ~-~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a--- 997 (1057)
. ...+.++.+.+......+ .+.+.+ .++||+|+++|||.||++|++++|++.+++++ +||+.| | ++||+.+
T Consensus 138 ~~~~~~~~l~~~i~~~~~~~-~~~~g~-~~lEi~p~g~~Kg~al~~ll~~~~~~~~~v~~-~GD~~n-D-~~mf~~~~~~ 212 (266)
T PRK10187 138 QHEDALLALAQRITQIWPQL-ALQPGK-CVVEIKPRGTNKGEAIAAFMQEAPFAGRTPVF-VGDDLT-D-EAGFAVVNRL 212 (266)
T ss_pred ccHHHHHHHHHHHHhhCCce-EEeCCC-EEEEeeCCCCCHHHHHHHHHHhcCCCCCeEEE-EcCCcc-H-HHHHHHHHhc
Confidence 1 122333333333332222 233444 59999999999999999999999999999888 788877 8 9999999
Q ss_pred -ceEEEeCCCc
Q 001541 998 -HKTVILKGIC 1007 (1057)
Q Consensus 998 -g~gVAMgNa~ 1007 (1057)
|.||+|||+.
T Consensus 213 ~g~~vavg~a~ 223 (266)
T PRK10187 213 GGISVKVGTGA 223 (266)
T ss_pred CCeEEEECCCC
Confidence 9999999998
|
|
| >PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-21 Score=230.57 Aligned_cols=369 Identities=15% Similarity=0.146 Sum_probs=220.4
Q ss_pred CCeEEEEccCCCc--c---cccccccCCCChh----------HHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCC
Q 001541 252 SGAYIIRIPFGPK--D---KYIAKELLWPHIP----------EFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYAD 316 (1057)
Q Consensus 252 ~gv~i~rip~~p~--~---~~l~k~~l~~~l~----------~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~ 316 (1057)
++..++.++..+. + ....+..+||.+. .|.........++-+.+++.+...- ..-|+|-.|...
T Consensus 73 ~~~~~~pV~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~-~~~D~VWVhDYh 151 (474)
T PF00982_consen 73 DEYNCVPVFLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDLARFEEEWWEAYKRVNRRFADAIAEVY-RPGDLVWVHDYH 151 (474)
T ss_dssp TTEEEEEEEE-HHHHHHHTTTHHHHTHHHHHTT-GG----G----HHHHHHHHHHHHHHHHHHGGG---TT-EEEEESGG
T ss_pred cCceEEEEEcCHHHHHHHHHhhhhhccCcccccccccccccchhhHHHHHHHHHHHHHHHHHHHHhC-cCCCEEEEeCCc
Confidence 4566666665321 0 2244667777333 2333334444444444444443321 236899999886
Q ss_pred chHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhh
Q 001541 317 AGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRL 395 (1057)
Q Consensus 317 ~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~ 395 (1057)
...++.++.++ .+.++.+..|..++..-. +. .++ .... -...+-.||.|-..|...+..+...
T Consensus 152 L~llP~~LR~~~~~~~IgfFlHiPFPs~e~--fr--~lP---------~r~e---iL~glL~aDlIgFqt~~~~~nFl~~ 215 (474)
T PF00982_consen 152 LMLLPQMLRERGPDARIGFFLHIPFPSSEI--FR--CLP---------WREE---ILRGLLGADLIGFQTFEYARNFLSC 215 (474)
T ss_dssp GTTHHHHHHHTT--SEEEEEE-S----HHH--HT--TST---------THHH---HHHHHTTSSEEEESSHHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCceEeeEEecCCCCHHH--Hh--hCC---------cHHH---HHHHhhcCCEEEEecHHHHHHHHHH
Confidence 66777777654 468889999987663310 00 001 1111 1236789999999999887776543
Q ss_pred hCCCChHHHHHHHHhHh--c-cccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCC
Q 001541 396 YDGFDPVLERKLRARIK--R-NVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTN 472 (1057)
Q Consensus 396 y~~~~~~~~~~l~~~~~--~-gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1057)
+.+.|+.... + +|...|+.. ++.++|.|||++.|...... .........++..+.
T Consensus 216 -------~~r~lg~~~~~~~~~v~~~Gr~v-~v~~~pigId~~~~~~~~~~-------------~~v~~~~~~l~~~~~- 273 (474)
T PF00982_consen 216 -------CKRLLGLEVDSDRGTVEYNGRRV-RVGVFPIGIDPDAFAQLARS-------------PEVQERAEELREKFK- 273 (474)
T ss_dssp -------HHHHS-EEEEETTE-EEETTEEE-EEEE------HHHHHHHHH--------------S---HHHHHHHHHTT-
T ss_pred -------HHHHcCCcccCCCceEEECCEEE-EEEEeeccCChHHHHhhccC-------------hHHHHHHHHHHHhcC-
Confidence 2333332222 2 355556555 89999999999988632111 123334455555542
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC--cEEEE--E-ec---CCCCcccchhhHHHHHHHHHHHHHcCCCC
Q 001541 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI--M-GN---RDGIDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~LI--v-G~---~~~~~~~~~~~~~~~~~l~~l~~~~~l~~ 544 (1057)
.+.++|+.++|+|+.||+...++||+++.+.+|.. +++|+ + .. .++++++..+..+..++|+....+.++.+
T Consensus 274 ~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQi~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~P 353 (474)
T PF00982_consen 274 GKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQIAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTP 353 (474)
T ss_dssp T-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEEE--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-S
T ss_pred CCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEEEeeccCccchhHHHHHHHHHHHHHHHHhhcccCCcee
Confidence 23589999999999999999999999998776654 45542 2 22 33355678888889999999999999999
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHc-----CCcEEEcCCCCchhhhhcCCceEEeCCCC
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH-----GLPIVATKNGGPVDIHRVLDNGLLVDPHD 619 (1057)
Q Consensus 545 ~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~-----G~PVVat~~Gg~~eiv~~~~~Gllv~p~d 619 (1057)
.+++.+.++++++.++|+.| ||+++||+.+||+|+.+|++|| |+.|++..+|+..++ . +.+++|||+|
T Consensus 354 I~~~~~~~~~~~~~aly~~a----Dv~lvTslrDGmNLva~Eyva~q~~~~GvLiLSefaGaa~~L-~--~~al~VNP~d 426 (474)
T PF00982_consen 354 IIYIYRSLSFEELLALYRAA----DVALVTSLRDGMNLVAKEYVACQDDNPGVLILSEFAGAAEQL-S--EAALLVNPWD 426 (474)
T ss_dssp EEEE-S---HHHHHHHHHH-----SEEEE--SSBS--HHHHHHHHHS-TS--EEEEETTBGGGGT--T--TS-EEE-TT-
T ss_pred EEEEecCCCHHHHHHHHHhh----hhEEecchhhccCCcceEEEEEecCCCCceEeeccCCHHHHc-C--CccEEECCCC
Confidence 88999999999999999999 9999999999999999999999 667788888887666 1 2359999999
Q ss_pred HHHHHHHHHHHHhCHHH-HHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 620 QQSVADALLKLVADKQL-WARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 620 ~~~la~aI~~ll~d~~~-~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
++++|+||.++|+++.. ++...+..++.+..++...|++.+++.+++
T Consensus 427 ~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 427 IEEVADAIHEALTMPPEERKERHARLREYVREHDVQWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-HHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCHHHHHHHHHHHhhC
Confidence 99999999999997664 444455556667999999999999998763
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B. |
| >cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.2e-20 Score=211.91 Aligned_cols=265 Identities=18% Similarity=0.140 Sum_probs=178.9
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
....|++.+.+.+..++.. ..+.++|+..|+.+.... +. .. ... ..|+.+++.||.|+++
T Consensus 101 ~~~~i~~~~~P~~~~~~~~---~~~~~~Vyd~~D~~~~~~------~~-~~--------~~~--~~e~~~~~~ad~vi~~ 160 (373)
T cd04950 101 FGRPILWYYTPYTLPVAAL---LQASLVVYDCVDDLSAFP------GG-PP--------ELL--EAERRLLKRADLVFTT 160 (373)
T ss_pred CCCcEEEEeCccHHHHHhh---cCCCeEEEEcccchhccC------CC-CH--------HHH--HHHHHHHHhCCEEEEC
Confidence 4466777766655444333 567899999998754321 10 11 001 3477889999999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+... . +++.+||||+|.+.|.+..... ..
T Consensus 161 S~~l~~~~~~~-~-------------------------~~i~~i~ngvd~~~f~~~~~~~--------------~~---- 196 (373)
T cd04950 161 SPSLYEAKRRL-N-------------------------PNVVLVPNGVDYEHFAAARDPP--------------PP---- 196 (373)
T ss_pred CHHHHHHHhhC-C-------------------------CCEEEcccccCHHHhhcccccC--------------CC----
Confidence 99866543221 1 2899999999999987542110 00
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
.+.....++++|+|+|++.+.++++.+.++.... +++. +++|.++..... ..+...
T Consensus 197 --~~~~~~~~~~~i~y~G~l~~~~d~~ll~~la~~~------p~~~~vliG~~~~~~~~---------------~~~~~~ 253 (373)
T cd04950 197 --PADLAALPRPVIGYYGAIAEWLDLELLEALAKAR------PDWSFVLIGPVDVSIDP---------------SALLRL 253 (373)
T ss_pred --hhHHhcCCCCEEEEEeccccccCHHHHHHHHHHC------CCCEEEEECCCcCccCh---------------hHhccC
Confidence 0011235688999999999988887666555432 3444 477876321110 111124
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCC-----CCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI-----EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPH 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~-----Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~ 618 (1057)
++|+|+|+++.++++.+|+.| |++++|+.. +++|++++||||||+|||+|+.++..+ ....+++ .+.
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~----Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~~~~~~---~~~~~~~-~~~ 325 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGF----DVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPLPEVRR---YEDEVVL-IAD 325 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhC----CEEecCCccchhhhcCCcchHHHHhccCCCEEecCcHHHHh---hcCcEEE-eCC
Confidence 789999999999999999999 999999753 468999999999999999998755443 3333444 467
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHc
Q 001541 619 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~ 666 (1057)
|+++++++|.+++.++...... ...+.++.|||+..+++++..+.+
T Consensus 326 d~~~~~~ai~~~l~~~~~~~~~--~~~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 326 DPEEFVAAIEKALLEDGPARER--RRLRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred CHHHHHHHHHHHHhcCCchHHH--HHHHHHHHCCHHHHHHHHHHHHHh
Confidence 9999999999987643221111 122245899999999999977654
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center |
| >PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-20 Score=223.04 Aligned_cols=256 Identities=13% Similarity=0.153 Sum_probs=165.5
Q ss_pred CCCCCcCCcccCcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCC
Q 001541 761 NTGAAKFPALRRRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFD 837 (1057)
Q Consensus 761 ~~~~~~~~~~~~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D 837 (1057)
+..++..|.....+|+||+|+||||. +.+++.++++|++++++ |+.|+|||||++..+..+++++++. +
T Consensus 403 ~~~~~~~~~~~~~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ek----GI~~VIATGRs~~~i~~l~~~Lgl~----~ 474 (694)
T PRK14502 403 AARPSRLPSSGQFKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDK----ELPLVFCSAKTMGEQDLYRNELGIK----D 474 (694)
T ss_pred hhhcccCCCcCceeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHc----CCeEEEEeCCCHHHHHHHHHHcCCC----C
Confidence 34556667667788999999999994 34677899999999987 9999999999999999999999983 6
Q ss_pred eEEeCCCcEEEeccCCCCCCCccccccc--hhhcccccchhhHHHHHHHhhhccc---c-----ccc--cccccc-c---
Q 001541 838 AFICNSGSDLYYSTLNSEDGPFVVDFYY--HSHIEYRWGGEGLRKTLVRWASQVT---D-----KKA--ESGEKV-L--- 901 (1057)
Q Consensus 838 ~lI~~nGa~I~~~~~~~~~~~~~~d~~~--~~~i~~~w~~e~l~~~~~~~~~~~~---~-----~~~--~~~~~~-~--- 901 (1057)
++||+||+.|+.+..... .....+... .......+..+.+++.+..+..... . ... ...... .
T Consensus 475 ~~I~eNGA~I~~~~~~~~-~~~~~~~~~~~~iI~~~~l~~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei 553 (694)
T PRK14502 475 PFITENGGAIFIPKDYFR-LPFAYDRVAGNYLVIELGMAYKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDV 553 (694)
T ss_pred eEEEcCCCEEEECCCccc-ccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHH
Confidence 799999999998753110 000000000 0011223344444444433222100 0 000 000000 0
Q ss_pred -----cc------cccccCcceEEEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHH
Q 001541 902 -----TP------AEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLR 970 (1057)
Q Consensus 902 -----~~------~~~~~~~~k~~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~ 970 (1057)
+. ........|+.+. .++ ..++++.+.+... .+++.. +.+++||+ .++|||+||++|+++
T Consensus 554 ~~~TgL~~~~a~~a~~Re~seKIl~~-gd~---e~Leel~~~L~~~--~l~v~~--g~rfleI~-~gvdKG~AL~~L~e~ 624 (694)
T PRK14502 554 SRLTDLNLKQAELAKQREYSETVHIE-GDK---RSTNIVLNHIQQS--GLEYSF--GGRFYEVT-GGNDKGKAIKILNEL 624 (694)
T ss_pred HHhhCCCHHHHHHHhhccCceeEEEc-CCH---HHHHHHHHHHHHc--CcEEEE--CCEEEEeC-CCCCHHHHHHHHHHH
Confidence 00 0001122344443 222 3466777777765 344443 44599999 599999999999999
Q ss_pred hCCCcccEEEE-ecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHH
Q 001541 971 WGVELSKMVVF-VGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 971 lgI~~e~viaf-~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
+|++.+++++| +||+.| | ++||+.+|+||||++-...-..+ ..++.. .|......|-..|+
T Consensus 625 ~gI~~~eViafalGDs~N-D-isMLe~Ag~gVAM~~~~~~~~~l---------------~~~~~~-~~~~~GP~GW~eai 686 (694)
T PRK14502 625 FRLNFGNIHTFGLGDSEN-D-YSMLETVDSPILVQRPGNKWHKM---------------RLRNPS-YVKGVGPEGFSRAV 686 (694)
T ss_pred hCCCccceEEEEcCCcHh-h-HHHHHhCCceEEEcCCCCCCCcc---------------CCCCce-ecCCCCcHHHHHHH
Confidence 99999999994 299999 9 99999999999998776222111 123444 55888999988888
Q ss_pred HHh
Q 001541 1050 EQL 1052 (1057)
Q Consensus 1050 ~~~ 1052 (1057)
.++
T Consensus 687 ~~~ 689 (694)
T PRK14502 687 TDI 689 (694)
T ss_pred HHH
Confidence 775
|
|
| >TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.8e-21 Score=203.75 Aligned_cols=205 Identities=15% Similarity=0.109 Sum_probs=128.4
Q ss_pred EEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccC
Q 001541 776 IFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 852 (1057)
Q Consensus 776 Li~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~ 852 (1057)
+|++||||||. +.+++.++++|++++++ |+.|+|||||++..+..+++.+++. ..++||+||+.|+....
T Consensus 1 ~i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~----gi~~~i~TgR~~~~~~~~~~~l~~~---~~~~I~~NGa~i~~~~~ 73 (221)
T TIGR02463 1 WVFSDLDGTLLDSHSYDWQPAAPWLTRLQEA----GIPVILCTSKTAAEVEYLQKALGLT---GDPYIAENGAAIHLEEL 73 (221)
T ss_pred CEEEeCCCCCcCCCCCCcHHHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCCC---CCcEEEeCCcEEEcCcc
Confidence 58999999994 22555699999999886 9999999999999999999999983 14799999999997532
Q ss_pred CCCCCCccccccchhhcccccchhhHHHHHHHhhhc---cccccccc-----c--ccccccc--ccccCcceEEEEe-cC
Q 001541 853 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQ---VTDKKAES-----G--EKVLTPA--EQLSTNYCYAFSV-QK 919 (1057)
Q Consensus 853 ~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~---~~~~~~~~-----~--~~~~~~~--~~~~~~~k~~~~~-~~ 919 (1057)
+... ..|.. .......+.+.+.+..+... ........ . ....... .......+..+.. .+
T Consensus 74 ~~~~------~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (221)
T TIGR02463 74 WREE------PGYPR-IILGISYGIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDS 146 (221)
T ss_pred cccC------CCceE-EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCc
Confidence 1100 00000 01111112222222111000 00000000 0 0000000 0001112222332 11
Q ss_pred CCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce
Q 001541 920 PGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK 999 (1057)
Q Consensus 920 ~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~ 999 (1057)
....+++++.+...+ +.+..+ +. ++||+|.+++||.|+++|++++||+++++++ +||+.| | ++||+.+|.
T Consensus 147 ---~~~~~~~~~~l~~~~--~~~~~~-~~-~~ei~~~~~~Kg~al~~l~~~lgi~~~~vi~-~GD~~N-D-i~ml~~ag~ 216 (221)
T TIGR02463 147 ---DSRMPRFTALLADLG--LAIVQG-NR-FSHVLGASSSKGKAANWLKATYNQPDVKTLG-LGDGPN-D-LPLLEVADY 216 (221)
T ss_pred ---hhHHHHHHHHHHHcC--CeEEec-CC-eeEEecCCCCHHHHHHHHHHHhCCCCCcEEE-ECCCHH-H-HHHHHhCCc
Confidence 224456666665533 444443 44 8999999999999999999999999999999 899999 9 999999999
Q ss_pred EEEeC
Q 001541 1000 TVILK 1004 (1057)
Q Consensus 1000 gVAMg 1004 (1057)
|||+.
T Consensus 217 ~va~~ 221 (221)
T TIGR02463 217 AVVIK 221 (221)
T ss_pred eEEeC
Confidence 99973
|
This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate. |
| >PTZ00174 phosphomannomutase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.2e-20 Score=206.38 Aligned_cols=207 Identities=14% Similarity=0.093 Sum_probs=125.3
Q ss_pred CcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEE
Q 001541 772 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLY 848 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~ 848 (1057)
...|||++||||||. +.+++.++++|++++++ |+.|+|||||++..+.+.++..... ..+++||+||+.|+
T Consensus 3 ~~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~----Gi~~viaTGR~~~~i~~~l~~~~~~--~~~~~I~~NGa~I~ 76 (247)
T PTZ00174 3 MKKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSK----GFKIGVVGGSDYPKIKEQLGEDVLE--DFDYVFSENGLVAY 76 (247)
T ss_pred CCCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHhhhhhc--ccCeEEeCCceEEE
Confidence 457999999999993 67999999999999997 9999999999999998888754321 13578999999999
Q ss_pred eccCCCCCCCccccccchhhcccccchhhHHHHHHHhhh----cccccccccccccccccccccCcceEEEEecC-----
Q 001541 849 YSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS----QVTDKKAESGEKVLTPAEQLSTNYCYAFSVQK----- 919 (1057)
Q Consensus 849 ~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~----- 919 (1057)
..+ ... +...+......+.+.+++..... ...... ...+...... .....+....
T Consensus 77 ~~~------~~i----~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~----~~~~~~~~~~--~~~~~~~~~~~~~~~ 140 (247)
T PTZ00174 77 KDG------ELF----HSQSILKFLGEEKLKKFINFCLRYIADLDIPVK----RGTFIEYRNG--MINISPIGRNCSQEE 140 (247)
T ss_pred ECC------eEE----EEEcchhcCCHHHHHHHHHHHHHHHHhcCCccc----eeeeEEcCCc--eEEeccccccCCHHH
Confidence 642 111 11111111112222322221110 000000 0001000000 0000000000
Q ss_pred -------CCCCccHHHHHHHHHHhcCcEEEEEeeC-CeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCC
Q 001541 920 -------PGMTPPVKELRKVLRIQALRCHVIYCQN-GSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGD 987 (1057)
Q Consensus 920 -------~~~~~~~~el~~~l~~~~~~~~v~~s~~-~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD----~~n 987 (1057)
........++.+.+......+.+.++.+ ..++||+|+++|||.||++|+++ ++++|| ||| +.|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~----~~evia-fGD~~~~~~N 215 (247)
T PTZ00174 141 RDEFEKYDKEHHIREKFIQDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND----FKEIHF-FGDKTFEGGN 215 (247)
T ss_pred HHHHHhcCCcchHHHHHHHHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh----hhhEEE-EcccCCCCCC
Confidence 0001123456666654434455666654 24899999999999999999999 589999 788 788
Q ss_pred CCccccccCc-ceEEEeCCCc
Q 001541 988 TDYEGLLGGV-HKTVILKGIC 1007 (1057)
Q Consensus 988 ~D~~eML~~a-g~gVAMgNa~ 1007 (1057)
| ++||+.+ -.|+.++||.
T Consensus 216 -D-ieMl~~~~~~g~~v~n~~ 234 (247)
T PTZ00174 216 -D-YEIYNDPRTIGHSVKNPE 234 (247)
T ss_pred -c-HhhhhcCCCceEEeCCHH
Confidence 8 9999954 2445555887
|
|
| >PLN02605 monogalactosyldiacylglycerol synthase | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-19 Score=208.25 Aligned_cols=265 Identities=12% Similarity=0.063 Sum_probs=187.0
Q ss_pred CcceEEEEcCCC-chHHHHHHHh-----cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcC
Q 001541 305 VWPVAIHGHYAD-AGDSAALLSG-----ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDAS 378 (1057)
Q Consensus 305 ~~pDvIh~h~~~-~~~~a~~l~~-----~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~a 378 (1057)
.+||+||++++. ....+..++. ..++|++.+.+++.... ..+..+.+
T Consensus 99 ~~pDvIi~thp~~~~~~~~~l~~~~~~~~~~~p~~~~~tD~~~~~---------------------------~~w~~~~~ 151 (382)
T PLN02605 99 YKPDIIVSVHPLMQHVPLRVLRWQGKELGKKIPFTTVVTDLGTCH---------------------------PTWFHKGV 151 (382)
T ss_pred cCcCEEEEeCcCcccCHHHHHHHHhhccCCCCCEEEEECCCCCcC---------------------------cccccCCC
Confidence 579999997643 2222222222 35899998888763111 01347789
Q ss_pred CEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 001541 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 458 (1057)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~ 458 (1057)
|.++++|+...+.+.. +|.+.+++.+++++++.+.+.+.
T Consensus 152 d~~~~~s~~~~~~l~~-----------------------~g~~~~ki~v~g~~v~~~f~~~~------------------ 190 (382)
T PLN02605 152 TRCFCPSEEVAKRALK-----------------------RGLEPSQIRVYGLPIRPSFARAV------------------ 190 (382)
T ss_pred CEEEECCHHHHHHHHH-----------------------cCCCHHHEEEECcccCHhhccCC------------------
Confidence 9999999887665433 22333489999999986543321
Q ss_pred CCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc----cCCCcEEEEEecCCCCcccchhhHHHHHHHH
Q 001541 459 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL----RELANLTLIMGNRDGIDEMSSTSASVLLSVL 534 (1057)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~----~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~ 534 (1057)
......+.++..++++++|+++||....|++..+++++..+... .+...+.+++|+++. +..++.
T Consensus 191 -~~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~----------~~~~L~ 259 (382)
T PLN02605 191 -RPKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK----------LQSKLE 259 (382)
T ss_pred -CCHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH----------HHHHHH
Confidence 11123345566677899999999999999999999999865311 122233356665421 123333
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC------CCchhhhhc
Q 001541 535 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN------GGPVDIHRV 608 (1057)
Q Consensus 535 ~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~------Gg~~eiv~~ 608 (1057)
++ ....+|.|+|++ ++++++|++| |++|.++ .|++++||||||+|||+++. |+...+ .+
T Consensus 260 ~~----~~~~~v~~~G~~--~~~~~l~~aa----Dv~V~~~----g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i-~~ 324 (382)
T PLN02605 260 SR----DWKIPVKVRGFV--TNMEEWMGAC----DCIITKA----GPGTIAEALIRGLPIILNGYIPGQEEGNVPYV-VD 324 (382)
T ss_pred hh----cccCCeEEEecc--ccHHHHHHhC----CEEEECC----CcchHHHHHHcCCCEEEecCCCccchhhHHHH-Hh
Confidence 32 223569999997 5899999999 9999865 48899999999999999983 455444 44
Q ss_pred CCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 609 LDNGLLVDPHDQQSVADALLKLVAD-KQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 609 ~~~Gllv~p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
.+.|+++ .|+++++++|.+++.+ ++.+++|++++++..+..+++.+++.+.+...
T Consensus 325 ~g~g~~~--~~~~~la~~i~~ll~~~~~~~~~m~~~~~~~~~~~a~~~i~~~l~~~~~ 380 (382)
T PLN02605 325 NGFGAFS--ESPKEIARIVAEWFGDKSDELEAMSENALKLARPEAVFDIVHDLHELVR 380 (382)
T ss_pred CCceeec--CCHHHHHHHHHHHHcCCHHHHHHHHHHHHHhcCCchHHHHHHHHHHHhh
Confidence 5567655 6999999999999998 99999999999999988999999888776653
|
|
| >PRK13608 diacylglycerol glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-19 Score=207.41 Aligned_cols=268 Identities=12% Similarity=0.095 Sum_probs=182.4
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+||++.+.........++.+++|++...++..... .+..+.+|.+++.
T Consensus 103 ~kPDvVi~~~p~~~~~~l~~~~~~~iP~~~v~td~~~~~----------------------------~w~~~~~d~~~v~ 154 (391)
T PRK13608 103 EKPDLILLTFPTPVMSVLTEQFNINIPVATVMTDYRLHK----------------------------NWITPYSTRYYVA 154 (391)
T ss_pred hCcCEEEECCcHHHHHHHHHhcCCCCCEEEEeCCCCccc----------------------------ccccCCCCEEEEC
Confidence 679999998764433222333456899865554431100 1246789999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+.+... +. +..++.|++++++.. |.... ....
T Consensus 155 s~~~~~~l~~~--gi---------------------~~~ki~v~GiPv~~~-f~~~~-------------------~~~~ 191 (391)
T PRK13608 155 TKETKQDFIDV--GI---------------------DPSTVKVTGIPIDNK-FETPI-------------------DQKQ 191 (391)
T ss_pred CHHHHHHHHHc--CC---------------------CHHHEEEECeecChH-hcccc-------------------cHHH
Confidence 98876665331 22 223888888777633 32110 0112
Q ss_pred HHHhhhCCCCCcE-EEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 465 EIMRFFTNPRKPV-ILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 465 ~~~~~~~~~~~~~-Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
.+.++..++++++ +++.|++...||+..+++++.+. .+...+.+++|+.+ ....++.+ .++..
T Consensus 192 ~~~~~~l~~~~~~ilv~~G~lg~~k~~~~li~~~~~~---~~~~~~vvv~G~~~----------~l~~~l~~---~~~~~ 255 (391)
T PRK13608 192 WLIDNNLDPDKQTILMSAGAFGVSKGFDTMITDILAK---SANAQVVMICGKSK----------ELKRSLTA---KFKSN 255 (391)
T ss_pred HHHHcCCCCCCCEEEEECCCcccchhHHHHHHHHHhc---CCCceEEEEcCCCH----------HHHHHHHH---HhccC
Confidence 2334455556665 45789999999999999986432 22223333445331 11233333 33445
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-CCC----chhhhhcCCceEEeCCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGG----PVDIHRVLDNGLLVDPH 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-~Gg----~~eiv~~~~~Gllv~p~ 618 (1057)
++|.|.|++ ++++++|+.| |++|. .+.|+++.||||+|+|+|+++ .+| ...++.+.+.|+++ .
T Consensus 256 ~~v~~~G~~--~~~~~~~~~a----Dl~I~----k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~~G~g~~~--~ 323 (391)
T PRK13608 256 ENVLILGYT--KHMNEWMASS----QLMIT----KPGGITISEGLARCIPMIFLNPAPGQELENALYFEEKGFGKIA--D 323 (391)
T ss_pred CCeEEEecc--chHHHHHHhh----hEEEe----CCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHhCCcEEEe--C
Confidence 689999995 6899999999 99986 357999999999999999996 443 12233455556654 4
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccCCC
Q 001541 619 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 671 (1057)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~~~ 671 (1057)
|.++++++|.+++++++.+++|++++++..+.|+++.+++.+++++....+.+
T Consensus 324 ~~~~l~~~i~~ll~~~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 324 TPEEAIKIVASLTNGNEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 99999999999999999999999999999889999999999999998665544
|
|
| >PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-20 Score=193.62 Aligned_cols=162 Identities=31% Similarity=0.511 Sum_probs=142.6
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe
Q 001541 470 FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 548 (1057)
Q Consensus 470 ~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f 548 (1057)
....++++|+++||+++.||++.+++|+..+.+. ..+++.+ |+|+++. ...+..++..+++..++.|
T Consensus 10 ~~~~~~~~il~~g~~~~~K~~~~li~a~~~l~~~-~~~~~~l~i~G~~~~-----------~~~~~~~~~~~~~~~~i~~ 77 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDPEKGIDLLIEAFKKLKEK-KNPNYKLVIVGDGEY-----------KKELKNLIEKLNLKENIIF 77 (172)
T ss_dssp TT-TTSEEEEEESESSGGGTHHHHHHHHHHHHHH-HHTTEEEEEESHCCH-----------HHHHHHHHHHTTCGTTEEE
T ss_pred CCCCCCeEEEEEecCccccCHHHHHHHHHHHHhh-cCCCeEEEEEccccc-----------ccccccccccccccccccc
Confidence 3457789999999999999999999999998642 2345554 7785542 5668888999999999999
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHH
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALL 628 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~ 628 (1057)
++.++.+++..+|+.| |++|+||..|+||++++|||+||+|||+++.|+..|++.++.+|+++++.|+++++++|.
T Consensus 78 ~~~~~~~~l~~~~~~~----di~v~~s~~e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~~~g~~~~~~~~~~l~~~i~ 153 (172)
T PF00534_consen 78 LGYVPDDELDELYKSS----DIFVSPSRNEGFGLSLLEAMACGCPVIASDIGGNNEIINDGVNGFLFDPNDIEELADAIE 153 (172)
T ss_dssp EESHSHHHHHHHHHHT----SEEEE-BSSBSS-HHHHHHHHTT-EEEEESSTHHHHHSGTTTSEEEESTTSHHHHHHHHH
T ss_pred cccccccccccccccc----eeccccccccccccccccccccccceeeccccCCceeeccccceEEeCCCCHHHHHHHHH
Confidence 9999888999999999 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhCHHHHHHHHHHHHHH
Q 001541 629 KLVADKQLWARCRQNGLKN 647 (1057)
Q Consensus 629 ~ll~d~~~~~~~~~~~~~~ 647 (1057)
+++.+++.++.|+++++++
T Consensus 154 ~~l~~~~~~~~l~~~~~~~ 172 (172)
T PF00534_consen 154 KLLNDPELRQKLGKNARER 172 (172)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHCCHHHHHHHHHHhcCC
Confidence 9999999999999999875
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B .... |
| >TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB | Back alignment and domain information |
|---|
Probab=99.83 E-value=7.8e-20 Score=194.21 Aligned_cols=193 Identities=16% Similarity=0.222 Sum_probs=129.7
Q ss_pred EEEEEecCCCC----CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEecc
Q 001541 776 IFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 851 (1057)
Q Consensus 776 Li~~DiDGTL~----~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~ 851 (1057)
||++|+||||+ ..+++.++++|++|+++ |+.|+|+|||++..+.++++.++ +++||+||+.|++.+
T Consensus 1 li~~D~DgTL~~~~~~~~~~~~~~~l~~l~~~----g~~~~i~TGR~~~~~~~~~~~~~------~~~i~~nGa~i~~~~ 70 (204)
T TIGR01484 1 LLFFDLDGTLLDPNAHELSPETIEALERLREA----GVKVVLVTGRSLAEIKELLKQLP------LPLIAENGALIFYPG 70 (204)
T ss_pred CEEEeCcCCCcCCCCCcCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHhCC------CCEEECCCcEEEECC
Confidence 58999999994 45889999999999987 79999999999999999998843 469999999999753
Q ss_pred CCCCCCCccccccchhhcccccchhhHHHHHH---HhhhcccccccccccccccccccccCcceEEEEecCCCC-CccHH
Q 001541 852 LNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLV---RWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGM-TPPVK 927 (1057)
Q Consensus 852 ~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~-~~~~~ 927 (1057)
.. .|.. ..+.....+. +......... .............+++|++.+... .....
T Consensus 71 ~~----------~~~~------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~ 129 (204)
T TIGR01484 71 EI----------LYIE------PSDVFEEILGIKEEIGAELKSLS-----EHYVGTFIEDKAIAVAIHYVGAELGQELDS 129 (204)
T ss_pred EE----------EEEc------ccccHHHHHHhhhhcCceeeeec-----cccccceeecccceeeEEEeccchhhHHHH
Confidence 11 1110 0011111110 1000000000 000000011234556666543211 11123
Q ss_pred HHHHHHHHhc---CcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 928 ELRKVLRIQA---LRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 928 el~~~l~~~~---~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
++...+.... ..++++++++. ++||+|++++|+.|++++++++|++++++++ +||+.| | ++||+.+|.+|||
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~s~~~-~~ev~p~~~~K~~~~~~~~~~~~~~~~~~~~-~GD~~n-D-~~~~~~~~~~vam 204 (204)
T TIGR01484 130 KMRERLEKIGRNDLELEAIYVGKT-DLEVLPAGVDKGSALQALLKELNGKRDEILA-FGDSGN-D-EEMFEVAGLAVAV 204 (204)
T ss_pred HHHHHHHhhccccCcEEEEEecCC-EEEEecCCCChHHHHHHHHHHhCCCHHHEEE-EcCCHH-H-HHHHHHcCCceEC
Confidence 4444444332 34677766775 9999999999999999999999999999988 888888 8 9999999999998
|
The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear. |
| >KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.82 E-value=2e-17 Score=176.87 Aligned_cols=390 Identities=18% Similarity=0.260 Sum_probs=261.2
Q ss_pred CCCcHHHHHHHHHHHHhcC-CCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccc
Q 001541 189 DTGGQVKYVVELARALGSM-PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 267 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~-Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~ 267 (1057)
..||-+++.+--.+.+.+. +. +...++|..++ +. |.+.|.. -...|.- -..++++.++.+.. ++
T Consensus 55 AGGGGErVLW~Avr~~q~k~~n-~~~viYsGD~n---~t-----~~~IL~k-~k~~F~i-dlDs~nI~Fi~Lk~----R~ 119 (465)
T KOG1387|consen 55 AGGGGERVLWKAVRITQRKFPN-NVIVIYSGDFN---VT-----PENILNK-VKNKFDI-DLDSDNIFFIYLKL----RY 119 (465)
T ss_pred CCCCcceehhHHHHHHHHhCCC-ceEEEEeCCCC---CC-----HHHHHHH-HHHhcCc-eecccceEEEEEEe----ee
Confidence 3578888888778877664 42 45555655532 11 1111111 0111111 12345677776654 56
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC--CCchHHHHHHHhcCCCCEEEEecCCch--hh
Q 001541 268 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY--ADAGDSAALLSGALNVPMLFTGHSLGR--DK 343 (1057)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~--~~~~~~a~~l~~~~~iP~V~t~H~l~~--~~ 343 (1057)
+....-|++..-+-+.+-..+..+ .++.+ ..|||.+-.. +.+-.+ +++..++|++..+|-.-- +-
T Consensus 120 lVea~~~~hfTllgQaigsmIl~~-Eai~r-------~~Pdi~IDtMGY~fs~p~---~r~l~~~~V~aYvHYP~iS~DM 188 (465)
T KOG1387|consen 120 LVEASTWKHFTLLGQAIGSMILAF-EAIIR-------FPPDIFIDTMGYPFSYPI---FRRLRRIPVVAYVHYPTISTDM 188 (465)
T ss_pred eeecccccceehHHHHHHHHHHHH-HHHHh-------CCchheEecCCCcchhHH---HHHHccCceEEEEecccccHHH
Confidence 666777888754444433333322 22222 5699888653 322222 233558999999996422 22
Q ss_pred HHHHHH---hhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCC
Q 001541 344 LEQLLK---QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGK 420 (1057)
Q Consensus 344 ~~~l~~---~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~ 420 (1057)
+..+.. .|.+.+. .-..|+++.++ -.++-..||.|++.|.........+.+.+
T Consensus 189 L~~l~qrq~s~~l~~~-KlaY~rlFa~l--Y~~~G~~ad~vm~NssWT~nHI~qiW~~~--------------------- 244 (465)
T KOG1387|consen 189 LKKLFQRQKSGILVWG-KLAYWRLFALL--YQSAGSKADIVMTNSSWTNNHIKQIWQSN--------------------- 244 (465)
T ss_pred HHHHHhhhhcchhhhH-HHHHHHHHHHH--HHhccccceEEEecchhhHHHHHHHhhcc---------------------
Confidence 222221 1211111 11233444443 45677899999998765444443333321
Q ss_pred CCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhc
Q 001541 421 FMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGEC 500 (1057)
Q Consensus 421 ~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l 500 (1057)
.+.+++|+.+.+........ ...+.+.+|++|.+.|.||.. +|+.+...
T Consensus 245 ---~~~iVyPPC~~e~lks~~~t---------------------------e~~r~~~ll~l~Q~RPEKnH~-~Lql~Al~ 293 (465)
T KOG1387|consen 245 ---TCSIVYPPCSTEDLKSKFGT---------------------------EGERENQLLSLAQFRPEKNHK-ILQLFALY 293 (465)
T ss_pred ---ceeEEcCCCCHHHHHHHhcc---------------------------cCCcceEEEEEeecCcccccH-HHHHHHHH
Confidence 56788888887754321100 024568899999999999999 55555554
Q ss_pred ccccCC----CcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcC
Q 001541 501 RPLREL----ANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA 575 (1057)
Q Consensus 501 ~~~~~~----~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps 575 (1057)
..+.++ +++.| ++|+... ++..+.+..++.++..+++.++|.|...+|.+++..+|..| .+-|++-
T Consensus 294 ~~~~pl~a~~~~iKL~ivGScRn-----eeD~ervk~Lkd~a~~L~i~~~v~F~~N~Py~~lv~lL~~a----~iGvh~M 364 (465)
T KOG1387|consen 294 LKNEPLEASVSPIKLIIVGSCRN-----EEDEERVKSLKDLAEELKIPKHVQFEKNVPYEKLVELLGKA----TIGVHTM 364 (465)
T ss_pred HhcCchhhccCCceEEEEeccCC-----hhhHHHHHHHHHHHHhcCCccceEEEecCCHHHHHHHhccc----eeehhhh
Confidence 444444 45555 6776543 23456789999999999999999999999999999999999 8999999
Q ss_pred CCCCCCHHHHHHHHcCCcEEEcCCCCch-hhhhc---CCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhc
Q 001541 576 FIEPFGLTLIEAAAHGLPIVATKNGGPV-DIHRV---LDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHL 650 (1057)
Q Consensus 576 ~~Egfgl~~lEAmA~G~PVVat~~Gg~~-eiv~~---~~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~ 650 (1057)
+.|-||+.+.||||+|+-.|+.+.||+. |||.+ ..+|++.. +.++.|++|++++. +++++..+++++|+.+.+
T Consensus 365 wNEHFGIsVVEyMAAGlIpi~h~SgGP~lDIV~~~~G~~tGFla~--t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~R 442 (465)
T KOG1387|consen 365 WNEHFGISVVEYMAAGLIPIVHNSGGPLLDIVTPWDGETTGFLAP--TDEEYAEAILKIVKLNYDERNMMRRNARKSLAR 442 (465)
T ss_pred hhhhcchhHHHHHhcCceEEEeCCCCCceeeeeccCCccceeecC--ChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999875 77754 24789885 88899999999998 788899999999999999
Q ss_pred CCHHHHHHHHHHHHHcccCC
Q 001541 651 FSWPEHCKTYLSRIAGCKPR 670 (1057)
Q Consensus 651 fsw~~~a~~~l~~~~~~~~~ 670 (1057)
|+-....+.|...+..+++.
T Consensus 443 FsE~~F~kd~~~~i~kll~e 462 (465)
T KOG1387|consen 443 FGELKFDKDWENPICKLLEE 462 (465)
T ss_pred hhHHHHHHhHhHHHHHhhcc
Confidence 99999999999999887654
|
|
| >TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase | Back alignment and domain information |
|---|
Probab=99.79 E-value=1e-18 Score=188.01 Aligned_cols=209 Identities=12% Similarity=0.012 Sum_probs=125.6
Q ss_pred EEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCC
Q 001541 776 IFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLN 853 (1057)
Q Consensus 776 Li~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~ 853 (1057)
+||+||||||. ..+++.++++|++++++ |+.|++||||+...+..+++++++. +++||+||+.|+.+...
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~----G~~~vi~TgR~~~~~~~~~~~lg~~----~~~I~~NGa~I~~~~~~ 72 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDL----GFPIVFVSSKTRAEQEYYREELGVE----PPFIVENGGAIFIPRGY 72 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCCC----CcEEEcCCcEEEecCcc
Confidence 58999999993 45667899999999987 9999999999999999999999983 57999999999986421
Q ss_pred CCCCCccccc-cchhhcccccchhhHHHHHHHhhh-ccccccccccc-------cc---ccccccccCcceEEEEecCCC
Q 001541 854 SEDGPFVVDF-YYHSHIEYRWGGEGLRKTLVRWAS-QVTDKKAESGE-------KV---LTPAEQLSTNYCYAFSVQKPG 921 (1057)
Q Consensus 854 ~~~~~~~~d~-~~~~~i~~~w~~e~l~~~~~~~~~-~~~~~~~~~~~-------~~---~~~~~~~~~~~k~~~~~~~~~ 921 (1057)
........+. .-...+...+..+.+++++..... ........... .. ...........++.+. .++
T Consensus 73 ~~~~~~~~~~~~~~~i~~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~-~~~- 150 (225)
T TIGR02461 73 FPFPVGAGREVGNYEVIELGKPVAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFL-WSR- 150 (225)
T ss_pred ccccccccccCCCeEEEEcCCCHHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccC-CCH-
Confidence 0000000000 000011222333333333322211 00000000000 00 0000000111222222 112
Q ss_pred CCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCC--CcccEEEEecCCCCCCccccccCcce
Q 001541 922 MTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGV--ELSKMVVFVGESGDTDYEGLLGGVHK 999 (1057)
Q Consensus 922 ~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI--~~e~viaf~GD~~n~D~~eML~~ag~ 999 (1057)
..+.++.+.+.. ..+++..+.. +++| +.++|||.|++.|++++++ +.+++++ +||+.| | ++||+.+|+
T Consensus 151 --e~~~~~~~~~~~--~~~~~~~s~~--~~~i-~~~~sK~~al~~l~~~~~~~~~~~~~i~-~GD~~n-D-~~ml~~ag~ 220 (225)
T TIGR02461 151 --EGWEAILVTARA--RGLKYTHGGR--FYTV-HGGSDKGKAIKRLLDLYKLRPGAIESVG-LGDSEN-D-FPMFEVVDL 220 (225)
T ss_pred --HHHHHHHHHHHH--cCCcEEECCE--EEEE-CCCCCHHHHHHHHHHHhccccCcccEEE-EcCCHH-H-HHHHHhCCC
Confidence 234455555532 3344554433 5775 5599999999999999987 6668888 888888 8 999999999
Q ss_pred EEEeC
Q 001541 1000 TVILK 1004 (1057)
Q Consensus 1000 gVAMg 1004 (1057)
||++|
T Consensus 221 ~v~v~ 225 (225)
T TIGR02461 221 AFLVG 225 (225)
T ss_pred cEecC
Confidence 99986
|
Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles. |
| >cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.7e-17 Score=176.51 Aligned_cols=119 Identities=31% Similarity=0.449 Sum_probs=98.2
Q ss_pred EEeCCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC-CcH
Q 001541 480 ALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ-SDV 557 (1057)
Q Consensus 480 ~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~-~dl 557 (1057)
++|++.+.||++.+++|+..+.+.. +++.+ ++|.+++ .......+..++...+|.+.|+++. +++
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~--~~~~~~i~G~~~~-----------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 175 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERG--PDLKLVIAGDGPE-----------REYLEELLAALLLLDRVIFLGGLDPEELL 175 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhC--CCeEEEEEeCCCC-----------hHHHHHHHHhcCCcccEEEeCCCCcHHHH
Confidence 9999999999999999999997433 45664 7787765 2223333667778889999999854 455
Q ss_pred HHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEe
Q 001541 558 PEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 615 (1057)
Q Consensus 558 ~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv 615 (1057)
..+++.| |++++|+..|+||++++|||++|+|||+|+.++..|++.++.+|++|
T Consensus 176 ~~~~~~~----di~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~~~~g~~~ 229 (229)
T cd01635 176 ALLLAAA----DVFVLPSLREGFGLVVLEAMACGLPVIATDVGGPPEIVEDGLTGLLV 229 (229)
T ss_pred HHHhhcC----CEEEecccccCcChHHHHHHhCCCCEEEcCCCCcceEEECCCceEEC
Confidence 5566658 99999999999999999999999999999999999999888899875
|
The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >PLN02580 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.3e-17 Score=188.82 Aligned_cols=205 Identities=10% Similarity=0.140 Sum_probs=134.0
Q ss_pred cCcceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 771 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
+.++.+||+|+||||. ..+++.++++|+.|.+. ..++|.|||+...+.+++.-.++ +++++
T Consensus 116 ~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~-----~~VAIVSGR~~~~L~~~l~~~~l------~laGs 184 (384)
T PLN02580 116 KGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY-----FPTAIISGRSRDKVYELVGLTEL------YYAGS 184 (384)
T ss_pred hcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC-----CCEEEEeCCCHHHHHHHhCCCCc------cEEEe
Confidence 3467899999999992 56889999999999875 36999999999999999976665 59999
Q ss_pred CCcEEEeccCCCCCCC-----ccccc---cchhh-cccccch--hhH----HHHHHHhhhcccccccccccccccccccc
Q 001541 843 SGSDLYYSTLNSEDGP-----FVVDF---YYHSH-IEYRWGG--EGL----RKTLVRWASQVTDKKAESGEKVLTPAEQL 907 (1057)
Q Consensus 843 nGa~I~~~~~~~~~~~-----~~~d~---~~~~~-i~~~w~~--e~l----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 907 (1057)
||.++..+........ ...+. .|... ....|.. +.+ .+...+.++...|.|
T Consensus 185 HG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K-------------- 250 (384)
T PLN02580 185 HGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENH-------------- 250 (384)
T ss_pred CCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEec--------------
Confidence 9999976421110000 00001 11000 0112221 111 112222344444433
Q ss_pred cCcceEEEEecCCCCCccHHHHHHHHHH---hcCcEEEEEeeCCeeEEEec-CCCCHHHHHHHHHHHhCCCccc-E-EEE
Q 001541 908 STNYCYAFSVQKPGMTPPVKELRKVLRI---QALRCHVIYCQNGSRINVIP-VLASRSQALRYLYLRWGVELSK-M-VVF 981 (1057)
Q Consensus 908 ~~~~k~~~~~~~~~~~~~~~el~~~l~~---~~~~~~v~~s~~~~~lEI~p-~gasKg~AL~~L~~~lgI~~e~-v-iaf 981 (1057)
.+++++|++..... ....+.+.+.. ....+.++ ++.+++||.| .++|||.||++|++++|++.++ + .+|
T Consensus 251 --~~svavHYR~a~~~-~~~~~~~~l~~~l~~~~~l~v~--~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d~~~pi~ 325 (384)
T PLN02580 251 --KFCVSVHYRNVDEK-NWPLVAQCVHDVLKKYPRLRLT--HGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCDDVLPIY 325 (384)
T ss_pred --CcEEEEEeCCCCch-HHHHHHHHHHHHHHhCCceEEE--eCCeEEEEecCCCCCHHHHHHHHHHhcCCCcccceeEEE
Confidence 68899999764321 11222222221 11224443 4445899999 5999999999999999998774 3 356
Q ss_pred ecCCCCCCccccccC-----cceEEEeCCCc
Q 001541 982 VGESGDTDYEGLLGG-----VHKTVILKGIC 1007 (1057)
Q Consensus 982 ~GD~~n~D~~eML~~-----ag~gVAMgNa~ 1007 (1057)
+||+.| | ++||+. .|+||+|||+.
T Consensus 326 iGDD~T-D-edmF~~L~~~~~G~~I~Vgn~~ 354 (384)
T PLN02580 326 IGDDRT-D-EDAFKVLREGNRGYGILVSSVP 354 (384)
T ss_pred ECCCch-H-HHHHHhhhccCCceEEEEecCC
Confidence 888888 8 999996 59999999987
|
|
| >PLN02423 phosphomannomutase | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.7e-17 Score=181.02 Aligned_cols=205 Identities=14% Similarity=0.131 Sum_probs=121.5
Q ss_pred cCcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhC-CCCCCCCCeEEeCCCcE
Q 001541 771 RRRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSG-HLSPSDFDAFICNSGSD 846 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~l-gl~~~~~D~lI~~nGa~ 846 (1057)
|..+.++++||||||. +.+++.++++|+++++ ++.|++||||++..+.+.+... .. +++++||+||+.
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~-----~i~fviaTGR~~~~~~~~~~~~~~~---~~~~~I~~NGa~ 75 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKELRK-----VVTVGVVGGSDLSKISEQLGKTVIN---DYDYVFSENGLV 75 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHh-----CCEEEEECCcCHHHHHHHhcccccc---cCCEEEECCceE
Confidence 3455677799999993 6799999999999984 3999999999999888777654 22 134799999999
Q ss_pred EEeccCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcc--cccccccccccccccccccCcceEEEEecCC----
Q 001541 847 LYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQV--TDKKAESGEKVLTPAEQLSTNYCYAFSVQKP---- 920 (1057)
Q Consensus 847 I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~---- 920 (1057)
|+..+. .. +...+......+.+++++....... ....... ..+.+.......++ +...+.
T Consensus 76 i~~~g~------~i----~~~~l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~--~~~ie~~~~i~~~~--~~~~~~~~~~ 141 (245)
T PLN02423 76 AHKDGK------LI----GTQSLKSFLGEDKLKEFINFTLHYIADLDIPIKR--GTFIEFRSGMLNVS--PIGRNCSQEE 141 (245)
T ss_pred EEeCCE------EE----EEecccccCCHHHHHHHHHHHHHHHHHcCCcccc--CCeEEccCCccccC--cccccCCHhH
Confidence 995431 11 1111112122233333332211100 0000000 00111000000000 000000
Q ss_pred ----C----CCccHHHHHHHHHHhcCcEEEEEeeCC-eeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCC
Q 001541 921 ----G----MTPPVKELRKVLRIQALRCHVIYCQNG-SRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGD 987 (1057)
Q Consensus 921 ----~----~~~~~~el~~~l~~~~~~~~v~~s~~~-~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD----~~n 987 (1057)
. ......++.+.+......+.+..+.++ +++||+|+|+|||.||+.|+ +++++|| ||| ++|
T Consensus 142 ~~~~~~i~~i~~~~~~~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~-----~~~e~~a-FGD~~~~~~N 215 (245)
T PLN02423 142 RDEFEKYDKVHNIRPKMVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE-----DFDEIHF-FGDKTYEGGN 215 (245)
T ss_pred HhhHHhhCccchHHHHHHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc-----CcCeEEE-EeccCCCCCC
Confidence 0 011234455555554445667666653 49999999999999999999 8999999 777 677
Q ss_pred CCccccccC-cceEEEeCC
Q 001541 988 TDYEGLLGG-VHKTVILKG 1005 (1057)
Q Consensus 988 ~D~~eML~~-ag~gVAMgN 1005 (1057)
| ++||+. .-.++.+.+
T Consensus 216 -D-~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 216 -D-HEIFESERTIGHTVTS 232 (245)
T ss_pred -c-HHHHhCCCcceEEeCC
Confidence 8 999996 446676653
|
|
| >COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.1e-16 Score=174.61 Aligned_cols=288 Identities=25% Similarity=0.308 Sum_probs=206.5
Q ss_pred ceEEEEcCCCchH---HHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 307 PVAIHGHYADAGD---SAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 307 pDvIh~h~~~~~~---~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
+|++|.+...... .........+.+.+...|............ .. ........... ........++.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~-~~~~~~~~~~~~~~ 156 (381)
T COG0438 84 YDIIHAHSLLLAPGGLLALLLLKLLGIPLVVTLHGLIPRILLLPRL----LL--LLGLLRLLLKR-LKKALRLLADRVIA 156 (381)
T ss_pred cceeeccccccccchhHHHhhccccCCcEEEeecCCcccccccccc----hh--hHHHHHHHHHH-HHHhccccccEEEE
Confidence 5999988753332 345555667889999999875532110000 00 00000000000 00111124777888
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
.+............. .++.++|++++...+.+....
T Consensus 157 ~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~-------------------- 192 (381)
T COG0438 157 VSPALKELLEALGVP------------------------NKIVVIPNGIDTEKFAPARIG-------------------- 192 (381)
T ss_pred CCHHHHHHHHHhCCC------------------------CCceEecCCcCHHHcCccccC--------------------
Confidence 877642221111110 167899999999887642000
Q ss_pred HHHHhhhCCCC--CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 464 SEIMRFFTNPR--KPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 464 ~~~~~~~~~~~--~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
..++ ...++++||+.+.||++.+++++..+....+. .. +++|.++.. ...+..++..+
T Consensus 193 -------~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~--~~~~~~g~~~~~----------~~~~~~~~~~~ 253 (381)
T COG0438 193 -------LLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD--IKLVIVGDGPER----------REELEKLAKKL 253 (381)
T ss_pred -------CCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC--eEEEEEcCCCcc----------HHHHHHHHHHh
Confidence 0122 37999999999999999999999999743222 44 477887653 23445577777
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCH
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQ 620 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~ 620 (1057)
+..+.|.|+|.++.+++..+|+.| +++++|+..|+||++++||||+|+|||+++.++..+++.++.+|+++.+.|.
T Consensus 254 ~~~~~v~~~g~~~~~~~~~~~~~~----~~~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~ 329 (381)
T COG0438 254 GLEDNVKFLGYVPDEELAELLASA----DVFVLPSLSEGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGETGLLVPPGDV 329 (381)
T ss_pred CCCCcEEEecccCHHHHHHHHHhC----CEEEeccccccchHHHHHHHhcCCcEEECCCCChHHHhcCCCceEecCCCCH
Confidence 777889999999878999999999 9999999889999999999999999999999999999988777888887789
Q ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHHccc
Q 001541 621 QSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~~~~ 668 (1057)
+++++++..++++++.++.+..++++.+ ..|+|+..++.+.+.+..+.
T Consensus 330 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (381)
T COG0438 330 EELADALEQLLEDPELREELGEAARERVEEEFSWERIAEQLLELYEELL 378 (381)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 9999999999999988888888777777 69999999999999988654
|
|
| >PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=99.75 E-value=7.7e-17 Score=174.32 Aligned_cols=249 Identities=18% Similarity=0.137 Sum_probs=152.3
Q ss_pred ceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|+||+||||||. ..+.+.++++|++|+++ |+.||+||||++.++..+++++++. +++||+||+.|+.+
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~----GI~vVlaTGRt~~ev~~l~~~Lgl~----~p~I~eNGA~I~~p 72 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERR----SIPLVLYSLRTRAQLEHLCRQLRLE----HPFICEDGSAIYVP 72 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHhCCC----CeEEEeCCcEEEEc
Confidence 4799999999993 45788899999999987 9999999999999999999999984 57999999999987
Q ss_pred cCCCCC----C-CccccccchhhcccccchhhHHHHHHHhhhcccc-cccccc--cccc-----c--cc--ccccCcceE
Q 001541 851 TLNSED----G-PFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTD-KKAESG--EKVL-----T--PA--EQLSTNYCY 913 (1057)
Q Consensus 851 ~~~~~~----~-~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~-~~~~~~--~~~~-----~--~~--~~~~~~~k~ 913 (1057)
...... . ....+..|. +........++..+..+...... ...... ...+ + +. ......|..
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~--~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SE 150 (302)
T PRK12702 73 EHYFPAGILDEQWQHRPPYYV--CALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSE 150 (302)
T ss_pred cccccccccccccccCCCceE--EecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCc
Confidence 432100 0 001111111 11122233444444433221110 000000 0000 0 00 001223333
Q ss_pred EEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEec------------------C---CCCHHHHHHHHHHHhC
Q 001541 914 AFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIP------------------V---LASRSQALRYLYLRWG 972 (1057)
Q Consensus 914 ~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p------------------~---gasKg~AL~~L~~~lg 972 (1057)
.+.....+ ..+++.+.+.+.++ .+++.++.++. . +++||+|++.|.+.|.
T Consensus 151 p~~w~~~~-----~~~~~~~~~~g~~~----~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~ 221 (302)
T PRK12702 151 IFSYSGDP-----ARLREAFAQQEANL----TQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQ 221 (302)
T ss_pred ceEecCCH-----HHHHHHHHHcCCeE----EecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHH
Confidence 33322111 12366666655432 24445778876 5 9999999999999987
Q ss_pred CCcc--cEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCC-cCCCCCeEEccCCCChHHHHHHH
Q 001541 973 VELS--KMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVM-PIDSPNIVQTPEDCTTSDIRSSL 1049 (1057)
Q Consensus 973 I~~e--~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~-~~~~~~~~~vt~~~~~dgI~~aL 1049 (1057)
-... .+++ .||+.| | ++||+.+.++|++.|......- ..| + .++ |...+... .|......|=.+++
T Consensus 222 ~~~~~~~tia-LGDspN-D-~~mLe~~D~~vvi~~~~~~~~~-~~~-----~-~l~~~~~~~~~~-~a~~~GP~GW~e~v 290 (302)
T PRK12702 222 RHLGPIKALG-IGCSPP-D-LAFLRWSEQKVVLPSPIADSLW-KEA-----L-RLGGPEVQPQWQ-LAQLPGPEGWNEVV 290 (302)
T ss_pred hccCCceEEE-ecCChh-h-HHHHHhCCeeEEecCCCCCCcc-ccc-----c-cccCcccCccce-ecCCCCcHHHHHHH
Confidence 6523 5777 899999 9 9999999999999877622210 000 0 000 22334444 66788888988888
Q ss_pred HHh
Q 001541 1050 EQL 1052 (1057)
Q Consensus 1050 ~~~ 1052 (1057)
.++
T Consensus 291 ~~~ 293 (302)
T PRK12702 291 LMW 293 (302)
T ss_pred HHH
Confidence 764
|
|
| >TIGR00685 T6PP trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.2e-17 Score=180.27 Aligned_cols=193 Identities=12% Similarity=0.088 Sum_probs=125.9
Q ss_pred cceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCC
Q 001541 773 RKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 844 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nG 844 (1057)
++++||+|+||||. ..+++.++++|+.|.+. +++.|+|+|||++.++...+.--++ +++++||
T Consensus 2 ~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~---~~~~v~ivSGR~~~~~~~~~~~~~~------~l~g~hG 72 (244)
T TIGR00685 2 RKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAAR---PHNAIWIISGRKFLEKWLGVKLPGL------GLAGEHG 72 (244)
T ss_pred CcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhC---CCCeEEEEECCChhhccccCCCCce------eEEeecC
Confidence 57899999999993 34678999999999887 6788899999988776544321122 5999999
Q ss_pred cEEEeccCCCCCCCccccccchhh--cccccch--hhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCC
Q 001541 845 SDLYYSTLNSEDGPFVVDFYYHSH--IEYRWGG--EGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKP 920 (1057)
Q Consensus 845 a~I~~~~~~~~~~~~~~d~~~~~~--i~~~w~~--e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 920 (1057)
++++..+... .|... ....|.. ..+..+....+++..+.+ .++++++++..
T Consensus 73 ~~~~~~g~~~---------~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K----------------~~s~~~hyr~a 127 (244)
T TIGR00685 73 CEMKDNGSCQ---------DWVNLTEKIPSWKVRANELREEITTRPGVFIERK----------------GVALAWHYRQA 127 (244)
T ss_pred EEEecCCCcc---------eeeechhhhhhHHHHHHHHHHHHhcCCCcEEEec----------------ceEEEEEeccC
Confidence 9998633110 11110 0012321 112222222244444333 46788888654
Q ss_pred -CCCccHHHHHHHHHHh--cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 001541 921 -GMTPPVKELRKVLRIQ--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 997 (1057)
Q Consensus 921 -~~~~~~~el~~~l~~~--~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a 997 (1057)
+.......+.+.+... ...+.++ .+..++||.|.++|||.|++.++++++++.+++++ +||+.| | ++||+.+
T Consensus 128 ~d~~~~~~~~~~~~~~~~~~~~~~v~--~g~~~~e~~p~~~~Kg~a~~~~~~~~~~~~~~~i~-iGD~~~-D-~~~~~~~ 202 (244)
T TIGR00685 128 PVPELARFRAKELKEKILSFTDLEVM--DGKAVVELKPRFVNKGEIVKRLLWHQPGSGISPVY-LGDDIT-D-EDAFRVV 202 (244)
T ss_pred CCcHHHHHHHHHHHHHHhcCCCEEEE--ECCeEEEEeeCCCCHHHHHHHHHHhcccCCCceEE-EcCCCc-H-HHHHHHH
Confidence 2111112223333221 1234333 44458999999999999999999999999888877 888888 8 9999988
Q ss_pred --------ceEEEeC
Q 001541 998 --------HKTVILK 1004 (1057)
Q Consensus 998 --------g~gVAMg 1004 (1057)
+.+|+|+
T Consensus 203 ~~~~~~~g~~~v~v~ 217 (244)
T TIGR00685 203 NNQWGNYGFYPVPIG 217 (244)
T ss_pred hcccCCCCeEEEEEe
Confidence 6889995
|
At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes. |
| >PRK09814 beta-1,6-galactofuranosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=8.7e-16 Score=175.78 Aligned_cols=245 Identities=11% Similarity=0.063 Sum_probs=164.6
Q ss_pred Ccc-eEEEEcCCCc-h--HHHHH--HHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcC
Q 001541 305 VWP-VAIHGHYADA-G--DSAAL--LSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDAS 378 (1057)
Q Consensus 305 ~~p-DvIh~h~~~~-~--~~a~~--l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~a 378 (1057)
.++ |+||.|++.. + ....+ ..+..|+|+|+++|++++..... . . ..+ ..|...++.|
T Consensus 62 ~~~~Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~---~----------~--~~~--~~~~~~~~~a 124 (333)
T PRK09814 62 LKPGDIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS---N----------Y--YLM--KEEIDMLNLA 124 (333)
T ss_pred CCCCCEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc---c----------c--hhh--HHHHHHHHhC
Confidence 346 9999998733 2 11222 22334899999999987643210 0 0 011 2366789999
Q ss_pred CEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCC
Q 001541 379 EIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 458 (1057)
Q Consensus 379 d~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~ 458 (1057)
|.||+.|+...+.+... |....++.++++..+.....+..
T Consensus 125 D~iI~~S~~~~~~l~~~-----------------------g~~~~~i~~~~~~~~~~~~~~~~----------------- 164 (333)
T PRK09814 125 DVLIVHSKKMKDRLVEE-----------------------GLTTDKIIVQGIFDYLNDIELVK----------------- 164 (333)
T ss_pred CEEEECCHHHHHHHHHc-----------------------CCCcCceEecccccccccccccc-----------------
Confidence 99999999987765331 22223677776554332111000
Q ss_pred CCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHH
Q 001541 459 DPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLI 537 (1057)
Q Consensus 459 ~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~ 537 (1057)
.....+.|+|+|++...+++.. .. +++. +|+|+++...
T Consensus 165 ------------~~~~~~~i~yaG~l~k~~~l~~----------~~--~~~~l~i~G~g~~~~----------------- 203 (333)
T PRK09814 165 ------------TPSFQKKINFAGNLEKSPFLKN----------WS--QGIKLTVFGPNPEDL----------------- 203 (333)
T ss_pred ------------cccCCceEEEecChhhchHHHh----------cC--CCCeEEEECCCcccc-----------------
Confidence 0134568999999994432211 11 2344 4789887421
Q ss_pred HHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcC-C----------CCCCCHHHHHHHHcCCcEEEcCCCCchhhh
Q 001541 538 DKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPA-F----------IEPFGLTLIEAAAHGLPIVATKNGGPVDIH 606 (1057)
Q Consensus 538 ~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps-~----------~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv 606 (1057)
...++|.|.|+++.++++.+|+.. +.+++. . .-.+|.++.||||||+|||+++.|+..++|
T Consensus 204 ---~~~~~V~f~G~~~~eel~~~l~~~-----~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~~~~~~~~V 275 (333)
T PRK09814 204 ---ENSANISYKGWFDPEELPNELSKG-----FGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWSKAAIADFI 275 (333)
T ss_pred ---ccCCCeEEecCCCHHHHHHHHhcC-----cCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECCCccHHHHH
Confidence 234689999999999999999874 333332 1 235788999999999999999999999999
Q ss_pred hcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHH
Q 001541 607 RVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 659 (1057)
Q Consensus 607 ~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~ 659 (1057)
+++.+|++++ +.++++++|..+ +++++++|++++++..+++.--...++
T Consensus 276 ~~~~~G~~v~--~~~el~~~l~~~--~~~~~~~m~~n~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 276 VENGLGFVVD--SLEELPEIIDNI--TEEEYQEMVENVKKISKLLRNGYFTKK 324 (333)
T ss_pred HhCCceEEeC--CHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 9999999998 788999999885 357789999999998865444333333
|
|
| >KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.74 E-value=4.7e-15 Score=159.20 Aligned_cols=382 Identities=16% Similarity=0.137 Sum_probs=240.1
Q ss_pred HHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccccccCCCC
Q 001541 197 VVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPH 276 (1057)
Q Consensus 197 v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~ 276 (1057)
+..=|..|++.| ++|+++.-..+-| . +++...+.++|+.++..|.-.+.++.
T Consensus 29 MqYHA~Sla~~g--f~VdliGy~~s~p---------~------------e~l~~hprI~ih~m~~l~~~~~~p~~----- 80 (444)
T KOG2941|consen 29 MQYHALSLAKLG--FQVDLIGYVESIP---------L------------EELLNHPRIRIHGMPNLPFLQGGPRV----- 80 (444)
T ss_pred HHHHHHHHHHcC--CeEEEEEecCCCC---------h------------HHHhcCCceEEEeCCCCcccCCCchh-----
Confidence 334578889999 9999996554212 1 22333579999999875542222211
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCC---CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhc
Q 001541 277 IPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA---DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARL 353 (1057)
Q Consensus 277 l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~---~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~ 353 (1057)
....-+++..+..+...|.. . ..||+|..+++ ....++.+.+...+.+++++.|+++.. ..--+..|..
T Consensus 81 -~~l~lKvf~Qfl~Ll~aL~~----~--~~~~~ilvQNPP~iPtliv~~~~~~l~~~KfiIDWHNy~Ys-l~l~~~~g~~ 152 (444)
T KOG2941|consen 81 -LFLPLKVFWQFLSLLWALFV----L--RPPDIILVQNPPSIPTLIVCVLYSILTGAKFIIDWHNYGYS-LQLKLKLGFQ 152 (444)
T ss_pred -hhhHHHHHHHHHHHHHHHHh----c--cCCcEEEEeCCCCCchHHHHHHHHHHhcceEEEEehhhHHH-HHHHhhcCCC
Confidence 11111222222211122221 1 45999999886 234455666678899999999999775 2212222322
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCC
Q 001541 354 SRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGME 433 (1057)
Q Consensus 354 ~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD 433 (1057)
+...+..++. |+..-+.||.-+|+|+.+.+++....+- -+-+.+|.+++. -|..+|
T Consensus 153 -----h~lV~l~~~~--E~~fgk~a~~nLcVT~AMr~dL~qnWgi-------------~ra~v~YDrPps----~~~~l~ 208 (444)
T KOG2941|consen 153 -----HPLVRLVRWL--EKYFGKLADYNLCVTKAMREDLIQNWGI-------------NRAKVLYDRPPS----KPTPLD 208 (444)
T ss_pred -----CchHHHHHHH--HHHhhcccccchhhHHHHHHHHHHhcCC-------------ceeEEEecCCCC----CCCchh
Confidence 2234445554 7889999999999999988776554331 112334444443 111111
Q ss_pred CCC--cCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhh-----CCCCCc-EEEEEeCCCCCCCHHHHHHHHHh-----c
Q 001541 434 FHH--IVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFF-----TNPRKP-VILALARPDPKKNITTLVKAFGE-----C 500 (1057)
Q Consensus 434 ~~~--f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~Il~vGRl~~~Kgi~~Ll~A~~~-----l 500 (1057)
..+ |.+...+......+.. ........+...++- ..+..| ++++.-...|..++..|++|+.. .
T Consensus 209 ~~H~lf~~l~~d~~~f~ar~~---q~~~~~~taf~~k~~s~~v~~~~~~pallvsSTswTpDEdf~ILL~AL~~y~~~~~ 285 (444)
T KOG2941|consen 209 EQHELFMKLAGDHSPFRAREP---QDKALERTAFTKKDASGDVQLLPERPALLVSSTSWTPDEDFGILLEALVIYEEQLY 285 (444)
T ss_pred HHHHHHhhhccccchhhhccc---ccchhhhhhHhhhcccchhhhccCCCeEEEecCCCCCcccHHHHHHHHHhhhhhhh
Confidence 111 2222211110111000 001111111111111 123344 55666678899999999999983 3
Q ss_pred ccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC-CC
Q 001541 501 RPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IE 578 (1057)
Q Consensus 501 ~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~-~E 578 (1057)
.+....|.+.. |.|.||. .+...+.+.++++...-.-..++..+|.|.++..|+ .+|++.+|. .=
T Consensus 286 ~~~~~lP~llciITGKGPl-----------kE~Y~~~I~~~~~~~v~~~tpWL~aEDYP~ll~saD--lGVcLHtSSSGL 352 (444)
T KOG2941|consen 286 DKTHNLPSLLCIITGKGPL-----------KEKYSQEIHEKNLQHVQVCTPWLEAEDYPKLLASAD--LGVCLHTSSSGL 352 (444)
T ss_pred hccCCCCcEEEEEcCCCch-----------hHHHHHHHHHhcccceeeeecccccccchhHhhccc--cceEeeecCccc
Confidence 33455677764 6687875 566778889999976556688999999999999993 356666663 23
Q ss_pred CCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHh----CHHHHHHHHHHHHHHhhcCCHH
Q 001541 579 PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA----DKQLWARCRQNGLKNIHLFSWP 654 (1057)
Q Consensus 579 gfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~----d~~~~~~~~~~~~~~v~~fsw~ 654 (1057)
-.|++++....||+||+|-+...+.|+|+++.||++|+ |.+++++.|.-++. +..+..++.+|.++. +...|+
T Consensus 353 DLPMKVVDMFGcglPvcA~~fkcl~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~-~e~RW~ 429 (444)
T KOG2941|consen 353 DLPMKVVDMFGCGLPVCAVNFKCLDELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELNQLKKNLREE-QELRWD 429 (444)
T ss_pred CcchhHHHhhcCCCceeeecchhHHHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHHHHHHhhHHH-HhhhHH
Confidence 47899999999999999999999999999999999998 99999999999998 788888888888887 455555
Q ss_pred HHH
Q 001541 655 EHC 657 (1057)
Q Consensus 655 ~~a 657 (1057)
..-
T Consensus 430 ~~W 432 (444)
T KOG2941|consen 430 ESW 432 (444)
T ss_pred HHH
Confidence 433
|
|
| >TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.1e-16 Score=185.67 Aligned_cols=273 Identities=14% Similarity=0.070 Sum_probs=175.7
Q ss_pred CcceEEEEcC-CCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~-~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|. ...+..+++++..+++|++++.+++-..... ..++. .+.++ .....||.+++
T Consensus 85 ~~pDiv~~~gd~~~~la~a~aa~~~~ipv~h~~~g~~s~~~~-----~~~~~-------~~~r~-----~~~~~ad~~~~ 147 (365)
T TIGR00236 85 EKPDIVLVQGDTTTTLAGALAAFYLQIPVGHVEAGLRTGDRY-----SPMPE-------EINRQ-----LTGHIADLHFA 147 (365)
T ss_pred cCCCEEEEeCCchHHHHHHHHHHHhCCCEEEEeCCCCcCCCC-----CCCcc-------HHHHH-----HHHHHHHhccC
Confidence 6799999996 4666778888889999998775554110000 00000 01111 12334899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+|+...+.+.+ .|.+..++.+++||+ |...+..... ..
T Consensus 148 ~s~~~~~~l~~-----------------------~G~~~~~I~vign~~~d~~~~~~~~~------------------~~ 186 (365)
T TIGR00236 148 PTEQAKDNLLR-----------------------ENVKADSIFVTGNTVIDALLTNVEIA------------------YS 186 (365)
T ss_pred CCHHHHHHHHH-----------------------cCCCcccEEEeCChHHHHHHHHHhhc------------------cc
Confidence 99987776543 233445899999996 4322211000 00
Q ss_pred HHHHHhhhCCCCCcEEEEEe-CC-CCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTNPRKPVILALA-RP-DPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK 539 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vG-Rl-~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~ 539 (1057)
..+.+.+. .+++++++.+ |. ...||+..+++|+.++.... +++.+ +++.+.. + .... +.+.
T Consensus 187 -~~~~~~~~-~~~~~vl~~~hr~~~~~k~~~~ll~a~~~l~~~~--~~~~~vi~~~~~~-~--------~~~~---~~~~ 250 (365)
T TIGR00236 187 -SPVLSEFG-EDKRYILLTLHRRENVGEPLENIFKAIREIVEEF--EDVQIVYPVHLNP-V--------VREP---LHKH 250 (365)
T ss_pred -hhHHHhcC-CCCCEEEEecCchhhhhhHHHHHHHHHHHHHHHC--CCCEEEEECCCCh-H--------HHHH---HHHH
Confidence 11112222 3346666666 43 24589999999999986433 34443 3333211 0 1111 2333
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-CCCCchhhhhcCCceEEeCCC
Q 001541 540 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVDIHRVLDNGLLVDPH 618 (1057)
Q Consensus 540 ~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-~~Gg~~eiv~~~~~Gllv~p~ 618 (1057)
++..++|.|.+.++..++..+|+.| |++|.+| |...+|||+||+|||++ +.|+..+++..+ .++++ +.
T Consensus 251 ~~~~~~v~~~~~~~~~~~~~~l~~a----d~vv~~S-----g~~~~EA~a~g~PvI~~~~~~~~~e~~~~g-~~~lv-~~ 319 (365)
T TIGR00236 251 LGDSKRVHLIEPLEYLDFLNLAANS----HLILTDS-----GGVQEEAPSLGKPVLVLRDTTERPETVEAG-TNKLV-GT 319 (365)
T ss_pred hCCCCCEEEECCCChHHHHHHHHhC----CEEEECC-----hhHHHHHHHcCCCEEECCCCCCChHHHhcC-ceEEe-CC
Confidence 4556789999999889999999999 9998877 56689999999999996 678888888755 56667 57
Q ss_pred CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHH
Q 001541 619 DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLS 662 (1057)
Q Consensus 619 d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~ 662 (1057)
|+++++++|.+++++++.+++++++...+-...+++++++.+.+
T Consensus 320 d~~~i~~ai~~ll~~~~~~~~~~~~~~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 320 DKENITKAAKRLLTDPDEYKKMSNASNPYGDGEASERIVEELLN 363 (365)
T ss_pred CHHHHHHHHHHHHhChHHHHHhhhcCCCCcCchHHHHHHHHHHh
Confidence 99999999999999999888887665322234555555554443
|
Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other. |
| >TIGR02094 more_P_ylases alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=99.70 E-value=9.9e-16 Score=185.20 Aligned_cols=338 Identities=16% Similarity=0.182 Sum_probs=219.7
Q ss_pred CcceEEEEcCCCchHHHHHHHhc--------------CCCCEEEEecCCchhhH---H-HHHHh--------hhcchHHH
Q 001541 305 VWPVAIHGHYADAGDSAALLSGA--------------LNVPMLFTGHSLGRDKL---E-QLLKQ--------ARLSRDEI 358 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~--------------~~iP~V~t~H~l~~~~~---~-~l~~~--------g~~~~~~~ 358 (1057)
.+|||||+|.|.++.+...+.+. .+..+|+|.|++.+.-. . .++.. -.++...+
T Consensus 160 ~~pdviH~ND~Htal~~~el~r~l~~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~~~~~~~~~~~~~~~~gl~~~~~ 239 (601)
T TIGR02094 160 IDPDVYHLNEGHAAFVTLERIRELIAQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFPEDLMRKYFGDYAANLGLPREQL 239 (601)
T ss_pred CCceEEEeCCchHHHHHHHHHHHHHHcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcCHHHHHHHhhhhhhHhCCCHHHH
Confidence 47999999999888877664221 14678999999865432 1 11110 00111111
Q ss_pred HHHHHHH----HHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCC
Q 001541 359 NATYKIM----RRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEF 434 (1057)
Q Consensus 359 ~~~yk~~----~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~ 434 (1057)
....... ..+..-+.++..|+.|.++|+...+...++...+.+..+ . ...++.-|-||||.
T Consensus 240 ~~~~~~~~~~~~~vnm~~lai~~S~~vngVS~lh~~v~~~l~~~l~~~~~----~-----------~~~~i~gItNGId~ 304 (601)
T TIGR02094 240 LALGRENPDDPEPFNMTVLALRLSRIANGVSKLHGEVSRKMWQFLYPGYE----E-----------EEVPIGYVTNGVHN 304 (601)
T ss_pred HhhhhhccCccCceeHHHHHHHhCCeeeeecHHHHHHHHHHHHhhhhhcc----c-----------ccCCccceeCCccc
Confidence 1100000 123345678999999999998766632222221111000 0 00147889999999
Q ss_pred CCcCCCCCCC-------CC---CC---CCCCCCCCCCCCchH-------HHHHhh------------------------h
Q 001541 435 HHIVPQDGDM-------DG---ET---EGNEDNPASPDPPIW-------SEIMRF------------------------F 470 (1057)
Q Consensus 435 ~~f~p~~~~~-------~~---~~---~~~~~~~~~~~~~~~-------~~~~~~------------------------~ 470 (1057)
..+.|..... .. +. +....-........| ..+.++ .
T Consensus 305 ~~W~~~~~~~l~~~y~~~~w~~~~~~~~~~~~~~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~ 384 (601)
T TIGR02094 305 PTWVAPELRDLYERYLGENWRELLADEELWEAIDDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRF 384 (601)
T ss_pred cccCCHHHHHHHHHhCCcchhccchhhhhhhhcccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccc
Confidence 9887532100 00 00 000000000000011 011111 1
Q ss_pred CCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccC--CCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE
Q 001541 471 TNPRKPVILALARPDPKKNITTLVKAFGECRPLRE--LANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~--~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~ 547 (1057)
..++.++|++++|+..+||.+.++.++.++..... ...++ +++|.+...+.+ ..++...+..++++....++|.
T Consensus 385 ~dpd~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~pvq~V~~Gka~p~d~~---gk~~i~~i~~la~~~~~~~kv~ 461 (601)
T TIGR02094 385 LDPDVLTIGFARRFATYKRADLIFRDLERLARILNNPERPVQIVFAGKAHPADGE---GKEIIQRIVEFSKRPEFRGRIV 461 (601)
T ss_pred cCCCCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCcccch---HHHHHHHHHHHHhcccCCCCEE
Confidence 45788999999999999999999999998864211 12355 466777654333 2456777888887755667888
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEE-cCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCC--------
Q 001541 548 YPKHHKQSDVPEIYRLAAKTKGVFIN-PAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDP-------- 617 (1057)
Q Consensus 548 f~g~v~~~dl~~ly~~Aa~~~dv~v~-ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p-------- 617 (1057)
|.-..+.+--..+|+.| |++++ |+. +|++|++=+=||..|.+.+++..|...|.. ++.||+.+.+
T Consensus 462 f~~~Yd~~lA~~i~aG~----Dv~L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~-~~~nGf~f~~~~~~~~~~ 536 (601)
T TIGR02094 462 FLENYDINLARYLVSGV----DVWLNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY-DGDNGWAIGDGEEYDDEE 536 (601)
T ss_pred EEcCCCHHHHHHHhhhh----eeEEeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC-CCCcEEEECCCccccccc
Confidence 87766544455666666 99999 888 999999999999999999999999998876 5689999984
Q ss_pred ----CCHHHHHHHHHHHH-----hC-----HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 618 ----HDQQSVADALLKLV-----AD-----KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 618 ----~d~~~la~aI~~ll-----~d-----~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
.|.++|.++|.+.+ ++ |..|.++.+++++.. ..|||.+++++|.+.|-
T Consensus 537 ~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~~yy 599 (601)
T TIGR02094 537 EQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVDKFY 599 (601)
T ss_pred cccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhC
Confidence 89999999997766 23 667999999999987 69999999999999873
|
This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343. |
| >cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc) | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.1e-15 Score=176.69 Aligned_cols=250 Identities=14% Similarity=0.083 Sum_probs=165.5
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||+|.. .....+..+++..++|++++.|+...... +. .. ...++ ...+.+|.+++
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~~------~~-~~-------~~~r~-----~~~~~ad~~~~ 147 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFDR------GM-PD-------EENRH-----AIDKLSDLHFA 147 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCCC------CC-Cc-------hHHHH-----HHHHHhhhccC
Confidence 57999999974 45566777788889999987775422100 00 00 01111 23567899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+|+...+.+.+ +|.+..++.+++|++ |...+.+.... .
T Consensus 148 ~s~~~~~~l~~-----------------------~G~~~~kI~vign~v~d~~~~~~~~~~----------------~-- 186 (363)
T cd03786 148 PTEEARRNLLQ-----------------------EGEPPERIFVVGNTMIDALLRLLELAK----------------K-- 186 (363)
T ss_pred CCHHHHHHHHH-----------------------cCCCcccEEEECchHHHHHHHHHHhhc----------------c--
Confidence 99887665432 233445899999985 54333211100 0
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTNPRKPVILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDK 539 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~---~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~ 539 (1057)
...+..++..++..++++.||+.. .||++.+++|+..+... ++.+++++.+. ....+.+.+.+
T Consensus 187 ~~~~~~~~~~~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~----~~~vi~~~~~~----------~~~~l~~~~~~ 252 (363)
T cd03786 187 ELILELLGLLPKKYILVTLHRVENVDDGEQLEEILEALAELAEE----DVPVVFPNHPR----------TRPRIREAGLE 252 (363)
T ss_pred chhhhhcccCCCCEEEEEeCCccccCChHHHHHHHHHHHHHHhc----CCEEEEECCCC----------hHHHHHHHHHh
Confidence 000122333344456778888775 79999999999988531 45444433221 13456666777
Q ss_pred cCC-CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCCceEEeCC
Q 001541 540 YDL-YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLVDP 617 (1057)
Q Consensus 540 ~~l-~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~p 617 (1057)
+++ .++|.|.+....++++.+|+.| |++|.+|- | +..|||++|+|||+++. +..++.+++ |+.+..
T Consensus 253 ~~~~~~~v~~~~~~~~~~~~~l~~~a----d~~v~~Sg----g-i~~Ea~~~g~PvI~~~~~~~~~~~~~~---g~~~~~ 320 (363)
T cd03786 253 FLGHHPNVLLISPLGYLYFLLLLKNA----DLVLTDSG----G-IQEEASFLGVPVLNLRDRTERPETVES---GTNVLV 320 (363)
T ss_pred hccCCCCEEEECCcCHHHHHHHHHcC----cEEEEcCc----c-HHhhhhhcCCCEEeeCCCCccchhhhe---eeEEec
Confidence 766 6789999988888999999999 99999984 4 46899999999999975 445666653 443333
Q ss_pred -CCHHHHHHHHHHHHhCHHHHHHH
Q 001541 618 -HDQQSVADALLKLVADKQLWARC 640 (1057)
Q Consensus 618 -~d~~~la~aI~~ll~d~~~~~~~ 640 (1057)
.|+++++++|.++++++..+..+
T Consensus 321 ~~~~~~i~~~i~~ll~~~~~~~~~ 344 (363)
T cd03786 321 GTDPEAILAAIEKLLSDEFAYSLM 344 (363)
T ss_pred CCCHHHHHHHHHHHhcCchhhhcC
Confidence 37999999999999998776655
|
The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st |
| >PLN03017 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.69 E-value=3e-16 Score=176.25 Aligned_cols=201 Identities=12% Similarity=0.138 Sum_probs=131.4
Q ss_pred CcceEEEEEecCCCC-------C-cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCC
Q 001541 772 RRKHIFVISVDCDST-------T-GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~-------~-~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~n 843 (1057)
.++.+||+|+||||. + .+++.++++|++|. + ++.|+|+|||++..+.+++.-.+ -++||+|
T Consensus 109 ~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La-~----~~~vaIvSGR~~~~l~~~~~l~~------l~l~g~h 177 (366)
T PLN03017 109 GKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA-K----CFPTAIVTGRCIDKVYNFVKLAE------LYYAGSH 177 (366)
T ss_pred CCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh-c----CCcEEEEeCCCHHHHHHhhcccC------ceEEEcC
Confidence 467899999999994 2 68999999999999 4 68899999999999998854322 2799999
Q ss_pred CcEEEeccCC-CCCC------CccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEE
Q 001541 844 GSDLYYSTLN-SEDG------PFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFS 916 (1057)
Q Consensus 844 Ga~I~~~~~~-~~~~------~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~ 916 (1057)
|++|..+... .... .......|...+.. ....+.....+.++...|.| .+++++|
T Consensus 178 Ga~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--v~~~L~~~~~~~pGa~VE~K----------------~~~vavH 239 (366)
T PLN03017 178 GMDIKGPAKGFSRHKRVKQSLLYQPANDYLPMIDE--VYRQLLEKTKSTPGAKVENH----------------KFCASVH 239 (366)
T ss_pred CcEEecCCCcceeccccccccccccchhhHHHHHH--HHHHHHHHHhcCCCCEEEec----------------CcEEEEE
Confidence 9999875421 0000 00000111111110 00112233334455555444 6889999
Q ss_pred ecCCCCCccHHHHHHHHHHh---cCcEEEEEeeCCeeEEEecC-CCCHHHHHHHHHHHhCCCc--ccEEEEecCCCCCCc
Q 001541 917 VQKPGMTPPVKELRKVLRIQ---ALRCHVIYCQNGSRINVIPV-LASRSQALRYLYLRWGVEL--SKMVVFVGESGDTDY 990 (1057)
Q Consensus 917 ~~~~~~~~~~~el~~~l~~~---~~~~~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~lgI~~--e~viaf~GD~~n~D~ 990 (1057)
++..+. ....++...+... ...+ ...++.+.+||.|. +.+||.|+++|++.+|+.- ..+++|+||+-+ |
T Consensus 240 yR~ad~-~~~~~l~~~~~~vl~~~~~l--~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~T-D- 314 (366)
T PLN03017 240 FRCVDE-KKWSELVLQVRSVLKNFPTL--KLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRT-D- 314 (366)
T ss_pred cCcCCH-HHHHHHHHHHHHHHHhCCCc--EEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCc-c-
Confidence 975432 1223343333321 1223 33456569999995 9999999999999998764 346778999888 9
Q ss_pred cccccCc-----ceEEEeCCC
Q 001541 991 EGLLGGV-----HKTVILKGI 1006 (1057)
Q Consensus 991 ~eML~~a-----g~gVAMgNa 1006 (1057)
++||+.+ |.||.+|..
T Consensus 315 EDaF~~L~~~~~G~gI~VG~~ 335 (366)
T PLN03017 315 EDAFKMLRDRGEGFGILVSKF 335 (366)
T ss_pred HHHHHHHhhcCCceEEEECCC
Confidence 9999966 578888843
|
|
| >PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.9e-15 Score=176.18 Aligned_cols=249 Identities=14% Similarity=0.037 Sum_probs=156.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+||++.. ......+..++..++|+++..|...... .....+ ...+.+|.|++
T Consensus 84 ~kPdivi~~~~~~~~~~~a~~a~~~~ip~i~~~~~~~~~~-----------------~~~~~~------~~~~~~d~i~~ 140 (380)
T PRK00025 84 EPPDVFIGIDAPDFNLRLEKKLRKAGIPTIHYVSPSVWAW-----------------RQGRAF------KIAKATDHVLA 140 (380)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHHCCCCEEEEeCCchhhc-----------------CchHHH------HHHHHHhhhee
Confidence 67999999863 2222223334556999998766431100 000111 13567899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
+++.+.+.+.. + |+ ++.+++|++....... +...
T Consensus 141 ~~~~~~~~~~~-~-----------------g~--------~~~~~G~p~~~~~~~~--------------------~~~~ 174 (380)
T PRK00025 141 LFPFEAAFYDK-L-----------------GV--------PVTFVGHPLADAIPLL--------------------PDRA 174 (380)
T ss_pred CCccCHHHHHh-c-----------------CC--------CeEEECcCHHHhcccc--------------------cChH
Confidence 98765544321 1 11 3556666553221100 0011
Q ss_pred HHHHhhhCCCCCcEEEE-Ee-CCCCC-CCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHH
Q 001541 464 SEIMRFFTNPRKPVILA-LA-RPDPK-KNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDK 539 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~-vG-Rl~~~-Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~ 539 (1057)
..+.++..++++++|+. .| |.... ++++.+++|+..+.+. .+++.+ ++|+.+. ....+.+++.+
T Consensus 175 ~~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~--~~~~~~ii~~~~~~----------~~~~~~~~~~~ 242 (380)
T PRK00025 175 AARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQR--YPDLRFVLPLVNPK----------RREQIEEALAE 242 (380)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHh--CCCeEEEEecCChh----------hHHHHHHHHhh
Confidence 22334444556676544 34 44343 4578999999988643 345554 4444221 13455666666
Q ss_pred c-CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-----------------CCCC
Q 001541 540 Y-DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-----------------KNGG 601 (1057)
Q Consensus 540 ~-~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-----------------~~Gg 601 (1057)
+ ++. +.+. ..++..+|+.| |++|.+| |.+.+|||++|+|+|++ +.++
T Consensus 243 ~~~~~--v~~~----~~~~~~~~~~a----Dl~v~~s-----G~~~lEa~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~ 307 (380)
T PRK00025 243 YAGLE--VTLL----DGQKREAMAAA----DAALAAS-----GTVTLELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVS 307 (380)
T ss_pred cCCCC--eEEE----cccHHHHHHhC----CEEEECc-----cHHHHHHHHhCCCEEEEEccCHHHHHHHHHHHcCCeee
Confidence 6 553 4443 25899999999 9999987 88888999999999987 5667
Q ss_pred chhhhhcCC--ceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 001541 602 PVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH 649 (1057)
Q Consensus 602 ~~eiv~~~~--~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~ 649 (1057)
.++++.++. .+++.+..|+++++++|.++++|++.++++++++.+..+
T Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~~~~~~~~~~~~~~~~ 357 (380)
T PRK00025 308 LPNLLAGRELVPELLQEEATPEKLARALLPLLADGARRQALLEGFTELHQ 357 (380)
T ss_pred hHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 778876653 457778889999999999999999999999998765553
|
|
| >COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.1e-15 Score=161.79 Aligned_cols=194 Identities=13% Similarity=0.161 Sum_probs=137.3
Q ss_pred cCcceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 771 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
..++++||+|+||||+ ..+++.++++|+.|.++ +.+.++|+|||+..++..++.-.++ ++||+
T Consensus 15 ~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~---~~~~v~iiSGR~~~~l~~~~~v~~i------~l~ae 85 (266)
T COG1877 15 NARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASD---PRNVVAIISGRSLAELERLFGVPGI------GLIAE 85 (266)
T ss_pred cccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhc---CCCeEEEEeCCCHHHHHHhcCCCCc------cEEEe
Confidence 6789999999999994 45788999999999998 6777999999999999999985555 59999
Q ss_pred CCcEEEeccCCC-CCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCC
Q 001541 843 SGSDLYYSTLNS-EDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG 921 (1057)
Q Consensus 843 nGa~I~~~~~~~-~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~ 921 (1057)
||+++....+.. .......+..|...+ .+.++.++.++|++..+.| .+.++||+++.+
T Consensus 86 hGa~~r~~~g~~~~~~~~~~~~~~~~~v-----~~~l~~~v~r~pGs~iE~K----------------~~a~~~Hyr~a~ 144 (266)
T COG1877 86 HGAEVRDPNGKWWINLAEEADLRWLKEV-----AAILEYYVERTPGSYIERK----------------GFAVALHYRNAE 144 (266)
T ss_pred cceEEecCCCCeeEecCHHHHhhHHHHH-----HHHHHHHhhcCCCeEEEEc----------------CcEEEEeeccCC
Confidence 999996543211 111111112222222 2356778888888888776 567889987655
Q ss_pred CCcc-HHHHHHHHHHhcCc-EEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce
Q 001541 922 MTPP-VKELRKVLRIQALR-CHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK 999 (1057)
Q Consensus 922 ~~~~-~~el~~~l~~~~~~-~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~ 999 (1057)
.... ...+.+........ ++++ .+...+|+.|.++|||.++++++++.+.+- .++.|.||+-+ | ++||+.+..
T Consensus 145 ~~~~~~~a~~~~~~~~~~~~~~v~--~gk~vVEvrp~~~~KG~a~~~i~~~~~~~~-~~~~~aGDD~T-D-E~~F~~v~~ 219 (266)
T COG1877 145 DDEGAALALAEAATLINELKLRVT--PGKMVVELRPPGVSKGAAIKYIMDELPFDG-RFPIFAGDDLT-D-EDAFAAVNK 219 (266)
T ss_pred chhhHHHHHHHHHhccccccEEEE--eCceEEEEeeCCcchHHHHHHHHhcCCCCC-CcceecCCCCc-c-HHHHHhhcc
Confidence 2211 12222222222222 4443 333489999999999999999999987764 56666898888 9 999999873
|
|
| >PLN02151 trehalose-phosphatase | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.2e-15 Score=167.50 Aligned_cols=202 Identities=10% Similarity=0.158 Sum_probs=130.9
Q ss_pred cCcceEEEEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 771 RRRKHIFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
..++.+||+|+||||. ..+++.++++|+.|.+ +..++|+|||++..+.+++.-.++ +++++
T Consensus 95 ~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-----~~~vaIvSGR~~~~l~~~~~~~~l------~laGs 163 (354)
T PLN02151 95 EGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-----CFPTAIVSGRCREKVSSFVKLTEL------YYAGS 163 (354)
T ss_pred cCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-----CCCEEEEECCCHHHHHHHcCCccc------eEEEe
Confidence 3567899999999993 3689999999999995 467999999999999999865454 68999
Q ss_pred CCcEEEeccCCCCCCCccccccc-hhhcccccchh------hHHHHHHHhhhcccccccccccccccccccccCcceEEE
Q 001541 843 SGSDLYYSTLNSEDGPFVVDFYY-HSHIEYRWGGE------GLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAF 915 (1057)
Q Consensus 843 nGa~I~~~~~~~~~~~~~~d~~~-~~~i~~~w~~e------~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 915 (1057)
||.++..+.... ....+..+ .......|... .+.+...+.++...+.| .+++++
T Consensus 164 HG~e~~~p~~g~---~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K----------------~~slav 224 (354)
T PLN02151 164 HGMDIKGPEQGS---KYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENN----------------KFCASV 224 (354)
T ss_pred CCceeecCCCCc---cccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEec----------------CcEEEE
Confidence 999998653110 00000000 00111122211 11222234455555444 688999
Q ss_pred EecCCCCCccHHHHHHHHHHhcCcE-EEEEeeCCeeEEEecC-CCCHHHHHHHHHHHhCCCc--ccEEEEecCCCCCCcc
Q 001541 916 SVQKPGMTPPVKELRKVLRIQALRC-HVIYCQNGSRINVIPV-LASRSQALRYLYLRWGVEL--SKMVVFVGESGDTDYE 991 (1057)
Q Consensus 916 ~~~~~~~~~~~~el~~~l~~~~~~~-~v~~s~~~~~lEI~p~-gasKg~AL~~L~~~lgI~~--e~viaf~GD~~n~D~~ 991 (1057)
|++..... ...++...+....... .+...++.+.+||.|. +++||.|+++|++.++..- ..+++|+||+-+ | +
T Consensus 225 HYR~a~~~-~~~~l~~~l~~v~~~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~T-D-E 301 (354)
T PLN02151 225 HFRCVEEN-KWSDLANQVRSVLKNYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRT-D-E 301 (354)
T ss_pred EeCCCChH-HHHHHHHHHHHHHhhCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCc-H-H
Confidence 99764421 1233444433211111 1233455569999995 9999999999999988763 246778999888 9 9
Q ss_pred ccccCc-----ceEEEeCC
Q 001541 992 GLLGGV-----HKTVILKG 1005 (1057)
Q Consensus 992 eML~~a-----g~gVAMgN 1005 (1057)
+||+.+ |.||.+|.
T Consensus 302 DaF~~L~~~~~G~gI~Vg~ 320 (354)
T PLN02151 302 DAFKILRDKKQGLGILVSK 320 (354)
T ss_pred HHHHHHhhcCCCccEEecc
Confidence 999864 56677763
|
|
| >PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3 | Back alignment and domain information |
|---|
Probab=99.57 E-value=7.6e-15 Score=159.51 Aligned_cols=191 Identities=13% Similarity=0.190 Sum_probs=111.3
Q ss_pred EEEecCCCC--------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEe
Q 001541 778 VISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 778 ~~DiDGTL~--------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~ 849 (1057)
|+|+||||. ..+++.++++|++|.+. +++.|+|.|||+...+..+..-.++ .++++||+++..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~---~~~~v~IvSGR~~~~~~~~~~~~~i------~l~gehG~e~~~ 71 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAAD---PNNTVAIVSGRSLDDLERFGGIPNI------GLAGEHGAEIRR 71 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHH---SE--EEEE-SS-HHHHHHH-S-SS-------EEEEGGGTEEEE
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhcc---CCCEEEEEEeCCHHHhHHhcCCCCc------eEEEEeeEEecc
Confidence 689999993 46788999999999998 6778999999999996555543334 699999999998
Q ss_pred ccCCCCCCCccccccch---hhcccccchh---hHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCC
Q 001541 850 STLNSEDGPFVVDFYYH---SHIEYRWGGE---GLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMT 923 (1057)
Q Consensus 850 ~~~~~~~~~~~~d~~~~---~~i~~~w~~e---~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~ 923 (1057)
++.. .|. ......|... .++.+..+++++..+.| .++++||++.....
T Consensus 72 ~~~~----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K----------------~~sv~~Hyr~~~~~ 125 (235)
T PF02358_consen 72 PGGS----------EWTNLPADEDLEWKDEVREILEYFAERTPGSFIEDK----------------EFSVAFHYRNAPPE 125 (235)
T ss_dssp TTE-----------EEE-TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEE----------------TTEEEEE-TTS-ST
T ss_pred Cccc----------cccccccccchHHHHHHHHHHHHHHhhccCcEEEEC----------------CeEEEEEecCCCcc
Confidence 7531 111 1112223322 23344455666666555 67889998765432
Q ss_pred ---ccHHHHHHHHHHh---cCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHhCCC--cccEEEEecCCCCCCcccccc
Q 001541 924 ---PPVKELRKVLRIQ---ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVE--LSKMVVFVGESGDTDYEGLLG 995 (1057)
Q Consensus 924 ---~~~~el~~~l~~~---~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~lgI~--~e~viaf~GD~~n~D~~eML~ 995 (1057)
....++.+.+... ...++++.. ...+||.|.+++||.|+++|+++++.. ..++++|+||+-. | ++||+
T Consensus 126 ~~~~~~~~l~~~l~~~~~~~~~~~v~~g--~~~vEvrp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~t-D-E~~f~ 201 (235)
T PF02358_consen 126 FGEAQARELAEQLREILASHPGLEVVPG--KKVVEVRPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRT-D-EDAFR 201 (235)
T ss_dssp ----THHHHHHHHHHHHHHH-T-EEEE---SSEEEEE-TT--HHHHHHHHHTTS---------EEEEESSHH-H-HHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhCCCEEEEEC--CCEEEEEeCCCChHHHHHHHHHhcCccccccceeEEecCCCC-C-HHHHH
Confidence 2345555555532 124554433 348999999999999999999998764 1235555788777 8 99998
Q ss_pred Cc------ceEEEeCCCc
Q 001541 996 GV------HKTVILKGIC 1007 (1057)
Q Consensus 996 ~a------g~gVAMgNa~ 1007 (1057)
.+ |.+|.++...
T Consensus 202 ~~~~~~~~~~~i~V~~~~ 219 (235)
T PF02358_consen 202 ALRELEEGGFGIKVGSVS 219 (235)
T ss_dssp TTTTS----EEEEES---
T ss_pred HHHhcccCCCCeEEEeec
Confidence 74 5678888654
|
1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A. |
| >TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1 | Back alignment and domain information |
|---|
Probab=99.56 E-value=9.6e-14 Score=166.15 Aligned_cols=167 Identities=12% Similarity=0.159 Sum_probs=142.9
Q ss_pred cEEEEEe--CCCCCCCHHHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCC---------
Q 001541 476 PVILALA--RPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY--------- 543 (1057)
Q Consensus 476 ~~Il~vG--Rl~~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~--------- 543 (1057)
..+++++ |+ +.|.++.+|+|+..+.. ..|++.| +.|-+.+ . ++...++++++++++.
T Consensus 320 ~~~I~v~idrL-~ek~~~~~I~av~~~~~--~~p~~~L~~~gy~~~-~-------~~~~~l~~~i~~~~~~~~~~~~~~~ 388 (519)
T TIGR03713 320 ETEIGFWIDGL-SDEELQQILQQLLQYIL--KNPDYELKILTYNND-N-------DITQLLEDILEQINEEYNQDKNFFS 388 (519)
T ss_pred ceEEEEEcCCC-ChHHHHHHHHHHHHHHh--hCCCeEEEEEEecCc-h-------hHHHHHHHHHHHHHhhhchhhhccc
Confidence 4566666 99 99999999999999975 4455665 4666543 1 1245566666666555
Q ss_pred --------------------CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch
Q 001541 544 --------------------GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV 603 (1057)
Q Consensus 544 --------------------~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~ 603 (1057)
.+|.|.|.++..++...|..| .++|.+|..|+|+ +.+||+++|+|+| +-|+.
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~a----rl~id~s~~eg~~-~~ieAiS~GiPqI---nyg~~ 460 (519)
T TIGR03713 389 LSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKL----RLIIDLSKEPDLY-TQISGISAGIPQI---NKVET 460 (519)
T ss_pred cchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhh----eEEEECCCCCChH-HHHHHHHcCCCee---ecCCc
Confidence 689999998777999999999 8999999999999 9999999999999 66778
Q ss_pred hhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHH
Q 001541 604 DIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSR 663 (1057)
Q Consensus 604 eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~ 663 (1057)
++|.++.||++| +|..+|+++|..+|.+++.|+++...+.+.+++||-+.+.+++.++
T Consensus 461 ~~V~d~~NG~li--~d~~~l~~al~~~L~~~~~wn~~~~~sy~~~~~yS~~~i~~kW~~~ 518 (519)
T TIGR03713 461 DYVEHNKNGYII--DDISELLKALDYYLDNLKNWNYSLAYSIKLIDDYSSENIIERLNEL 518 (519)
T ss_pred eeeEcCCCcEEe--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhHHHHHHHHHhh
Confidence 999999999999 4999999999999999999999999999999999999999988765
|
This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown. |
| >cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.6e-12 Score=159.94 Aligned_cols=331 Identities=17% Similarity=0.224 Sum_probs=219.4
Q ss_pred CcceEEEEcCCCchHHHH-----HHHhc----------CCCCEEEEecCCchhh---HH-HHHHh--------hhcchHH
Q 001541 305 VWPVAIHGHYADAGDSAA-----LLSGA----------LNVPMLFTGHSLGRDK---LE-QLLKQ--------ARLSRDE 357 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~-----~l~~~----------~~iP~V~t~H~l~~~~---~~-~l~~~--------g~~~~~~ 357 (1057)
..|||||+|.+.++.+.. ++... .+..+|||.|++.+.- +. .++.. -.++...
T Consensus 247 ~~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp~~l~~~~~~~~~~~lgl~~~~ 326 (778)
T cd04299 247 IKPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFPPDLVERYFGPYARELGLSRDR 326 (778)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCCHHHHHHHhhHHHHHcCCCHHH
Confidence 469999999998888777 44321 1467899999985432 11 11100 0011111
Q ss_pred HHHHHHHH-----HHHHHHHHHhhcCCEEEecCHHH---HHHHHh-hhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 358 INATYKIM-----RRIEAEELSLDASEIVITSTRQE---IEEQWR-LYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 358 ~~~~yk~~-----~ri~~E~~~l~~ad~Vi~~S~~~---~~~~~~-~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
+....... ..+..-..++..|+.|.++|+-. ..+++. ++.++.. ...++.-|
T Consensus 327 ~~~lg~e~~~~~~~~~nM~~laL~~S~~vNgVS~lHg~vsr~mf~~~~~g~p~-------------------~~~~i~~I 387 (778)
T cd04299 327 FLALGRENPGDDPEPFNMAVLALRLAQRANGVSRLHGEVSREMFAGLWPGFPV-------------------EEVPIGHV 387 (778)
T ss_pred HhhhccccccCccCceeHHHHHHHhcCeeeeecHHHHHHHHHHhhhhhccCCc-------------------ccCceece
Confidence 11100000 12334467899999999999865 333332 2333221 11268899
Q ss_pred CCCCCCCCcC-CCCCCCCCCCCCCC---------------CCCCCCCCchHH-------HHHhhh---------------
Q 001541 429 PPGMEFHHIV-PQDGDMDGETEGNE---------------DNPASPDPPIWS-------EIMRFF--------------- 470 (1057)
Q Consensus 429 pnGiD~~~f~-p~~~~~~~~~~~~~---------------~~~~~~~~~~~~-------~~~~~~--------------- 470 (1057)
-|||+...+. |.-.. .+.+.. ....-.+...|. .+.++.
T Consensus 388 TNGVh~~~W~~P~~~~---l~~~~~g~~w~~~~~~~~~~~~~~~i~d~~lw~~K~~~K~~L~~~v~~~~~~~~~~~g~~~ 464 (778)
T cd04299 388 TNGVHVPTWVAPEMRE---LYDRYLGGDWRERPTDPELWEAVDDIPDEELWEVRQQLRRRLIEFVRRRLRRQWLRRGASA 464 (778)
T ss_pred eCCcchhhhcCHHHHH---HHHHhcCcchhhccchHHHHhhhcCCCcHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCch
Confidence 9999998877 32110 000000 000001111221 111111
Q ss_pred ---------CCCCCcEEEEEeCCCCCCCHHHHHHHHHhccccc--CCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 471 ---------TNPRKPVILALARPDPKKNITTLVKAFGECRPLR--ELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 471 ---------~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~--~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
..|+.++|+++.|+..+|+.+.+++.+.++.... +...+.+ +.|.+...++. ..++...|..+.+
T Consensus 465 ~~~~~~~~~ldpd~ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~~pvQ~IfaGKAhP~d~~---gK~iIk~i~~~a~ 541 (778)
T cd04299 465 EEIGEADDVLDPNVLTIGFARRFATYKRATLLLRDPERLKRLLNDPERPVQFIFAGKAHPADEP---GKELIQEIVEFSR 541 (778)
T ss_pred hhhhhcCCccCCCccEEeeeecchhhhhHHHHHHHHHHHHHHhhCCCCCeEEEEEEecCccchH---HHHHHHHHHHHHh
Confidence 4567789999999999999999999988885421 1123554 66776543332 3457778888888
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeC
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 616 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 616 (1057)
.....++|.|+...+-+--..+++.| ||+++||. .|++|+.-+=||.-|.+-+++..|...|.. ++.||+.+.
T Consensus 542 ~p~~~~kVvfle~Yd~~lA~~LvaG~----DvwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~-~g~nGwaig 616 (778)
T cd04299 542 RPEFRGRIVFLEDYDMALARHLVQGV----DVWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY-DGENGWAIG 616 (778)
T ss_pred CcCCCCcEEEEcCCCHHHHHHHHhhh----hhcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc-CCCCceEeC
Confidence 66777789987776555556667777 99999999 999999999999999999999999999887 789999998
Q ss_pred C------------CCHHHHHHHHHHHHh----C------HHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 617 P------------HDQQSVADALLKLVA----D------KQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 617 p------------~d~~~la~aI~~ll~----d------~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+ .|.++|.+.|.+.+- + |..|.++.+++++.+ ..|||.+++++|.+.+-
T Consensus 617 ~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~Y 688 (778)
T cd04299 617 DGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERFY 688 (778)
T ss_pred CCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHhH
Confidence 7 567788888865443 2 778999999999998 69999999999998876
|
Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea. |
| >PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3 | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.7e-12 Score=151.55 Aligned_cols=328 Identities=18% Similarity=0.215 Sum_probs=184.2
Q ss_pred CcceEEEEcCCCchHHHHHHHhc-CCCCEEEEecCCchhhHHHHHHhh-----hc---chHHHHHHHHHHHHHHHHHHHh
Q 001541 305 VWPVAIHGHYADAGDSAALLSGA-LNVPMLFTGHSLGRDKLEQLLKQA-----RL---SRDEINATYKIMRRIEAEELSL 375 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~-~~iP~V~t~H~l~~~~~~~l~~~g-----~~---~~~~~~~~yk~~~ri~~E~~~l 375 (1057)
...-|.|+|-|.+|....++.+. ..+..|||.|....... +...+ .+ .....-..+.+..+...|+.+.
T Consensus 142 ~~~ViaHfHEWmaG~gll~lr~~~~~VaTvFTTHAT~lGR~--l~~~~~~~Y~~L~~~~~d~eA~~~~i~~k~~iEraaA 219 (633)
T PF05693_consen 142 KPKVIAHFHEWMAGVGLLYLRKRKPDVATVFTTHATLLGRY--LAANNKDFYNNLDKFNGDQEAGERNIYHKHSIERAAA 219 (633)
T ss_dssp SEEEEEEEESGGGTTHHHHHHHTT-SCEEEEEESS-HHHHH--HTTTSS-TTTSGTTS-HHHHHHHTT-HHHHHHHHHHH
T ss_pred CCcEEEEechHhHhHHHHHHhccCCCeeEEEEecccchhhH--hhcCCCcHHHHhhccCccccccCccchHHHHHHHHHH
Confidence 34678899999888777666543 46788999997633221 11111 01 1122333455677778899999
Q ss_pred hcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 001541 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNP 455 (1057)
Q Consensus 376 ~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~ 455 (1057)
..||++.++|+-...+-..+.+. .+ =.|+|||++...|.... ++.+..
T Consensus 220 ~~AdvFTTVSeITa~Ea~~LL~r----------------------~p--DvV~pNGl~v~~~~~~~--------efqnl~ 267 (633)
T PF05693_consen 220 HYADVFTTVSEITAKEAEHLLKR----------------------KP--DVVTPNGLNVDKFPALH--------EFQNLH 267 (633)
T ss_dssp HHSSEEEESSHHHHHHHHHHHSS--------------------------SEE----B-GGGTSSTT--------HHHHHH
T ss_pred HhcCeeeehhhhHHHHHHHHhCC----------------------CC--CEEcCCCccccccccch--------HHHHHH
Confidence 99999999998666665444332 11 15899999998776321 000000
Q ss_pred CCCCCchHHHHHhhhCC-----CC-CcEEEEEeCCCC-CCCHHHHHHHHHhcccc----cCCCcEE-EEE----------
Q 001541 456 ASPDPPIWSEIMRFFTN-----PR-KPVILALARPDP-KKNITTLVKAFGECRPL----RELANLT-LIM---------- 513 (1057)
Q Consensus 456 ~~~~~~~~~~~~~~~~~-----~~-~~~Il~vGRl~~-~Kgi~~Ll~A~~~l~~~----~~~~~l~-LIv---------- 513 (1057)
+.....+....+..+.. ++ ..+|...||... .||++.+|+|+.++... .....++ +|+
T Consensus 268 ~~~k~ki~~fv~~~f~g~~dfd~d~tl~~ftsGRYEf~NKG~D~fieAL~rLn~~lk~~~~~~tVVaFii~pa~~~~~~v 347 (633)
T PF05693_consen 268 AKAKEKIHEFVRGHFYGHYDFDLDKTLYFFTSGRYEFRNKGIDVFIEALARLNHRLKQAGSDKTVVAFIIVPAKTNSFNV 347 (633)
T ss_dssp HHHHHHHHHHHHHHSTT---S-GGGEEEEEEESSS-TTTTTHHHHHHHHHHHHHHHHHTT-S-EEEEEEE---SEEEE-H
T ss_pred HHHHHHHHHHHHHHhcccCCCCccceEEEEeeeceeeecCCccHHHHHHHHHHHHHhhcCCCCeEEEEEEecCccCCcCH
Confidence 01122333333333211 23 456777889985 69999999999998531 1112222 332
Q ss_pred ---------------------------------ecCCCCcccchhhH--------------------------HHHHHHH
Q 001541 514 ---------------------------------GNRDGIDEMSSTSA--------------------------SVLLSVL 534 (1057)
Q Consensus 514 ---------------------------------G~~~~~~~~~~~~~--------------------------~~~~~l~ 534 (1057)
|.-|+.+++-...+ .--+.|.
T Consensus 348 e~l~~~a~~~~l~~t~~~i~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~lkr~i~~~~r~~lPPi~TH~l~d~~~DpIL 427 (633)
T PF05693_consen 348 ESLKGQAVTKQLRDTVDEIQEKIGKRLFESCLSGRLPDLNELLDKEDIVRLKRCIFALQRNSLPPITTHNLHDDSNDPIL 427 (633)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSS-SHHHCS-HHHHHHHHHHHHTT--T----SBSEEETTTTT-HHH
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCChHHhcChhhHHHHHHHHHHhccCCCCCeeeeCCCCCccCHHH
Confidence 11111111100000 0012233
Q ss_pred HHHHHcCCCC------CEEeCC-CCC------CCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC
Q 001541 535 KLIDKYDLYG------QVAYPK-HHK------QSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 601 (1057)
Q Consensus 535 ~l~~~~~l~~------~V~f~g-~v~------~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg 601 (1057)
..+.+++|.+ +|.|++ +++ .-+..++++.| |+.|+||.+||+|.|.+|+.|+|+|.|+|+..|
T Consensus 428 n~irr~~L~N~~~drVKVIF~P~yL~~~dgif~l~Y~dfv~Gc----dLgvFPSYYEPWGYTPlE~~a~gVPsITTnLsG 503 (633)
T PF05693_consen 428 NMIRRLGLFNNPEDRVKVIFHPEYLSGTDGIFNLDYYDFVRGC----DLGVFPSYYEPWGYTPLECTAFGVPSITTNLSG 503 (633)
T ss_dssp HHHHHTT----TT-SEEEEE--S---TTSSSS-S-HHHHHHHS----SEEEE--SSBSS-HHHHHHHHTT--EEEETTBH
T ss_pred HHHHhCCCCCCCCCceEEEEeeccccCCCCCCCCCHHHHhccC----ceeeeccccccccCChHHHhhcCCceeeccchh
Confidence 3344444422 234432 332 23789999999 999999999999999999999999999999988
Q ss_pred chhhhhc-----CCceEEe-CC--CC----HHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHccc
Q 001541 602 PVDIHRV-----LDNGLLV-DP--HD----QQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 602 ~~eiv~~-----~~~Gllv-~p--~d----~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~ 668 (1057)
+...+.. ...|+.| +- .+ .++|++.|.+... ++..+..+++++.+..+.++|.....-|.+.|...+
T Consensus 504 FG~~~~~~~~~~~~~GV~VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~~Ay~~AL 583 (633)
T PF05693_consen 504 FGCWMQEHIEDPEEYGVYVVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYEKAYDLAL 583 (633)
T ss_dssp HHHHHHTTS-HHGGGTEEEE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCcEEEEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7766553 2356655 32 23 3556666666655 566778888888877799999999999999987665
Q ss_pred CC
Q 001541 669 PR 670 (1057)
Q Consensus 669 ~~ 670 (1057)
.+
T Consensus 584 ~~ 585 (633)
T PF05693_consen 584 RR 585 (633)
T ss_dssp HH
T ss_pred Hh
Confidence 43
|
Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D. |
| >PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A | Back alignment and domain information |
|---|
Probab=99.42 E-value=1.8e-13 Score=134.98 Aligned_cols=131 Identities=31% Similarity=0.432 Sum_probs=93.4
Q ss_pred CcEEEEEeCCCCCCCHHHHHH-HHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001541 475 KPVILALARPDPKKNITTLVK-AFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 552 (1057)
Q Consensus 475 ~~~Il~vGRl~~~Kgi~~Ll~-A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v 552 (1057)
-++|+++|++.+.|+++.+++ |+.++.+.. |++.+ |+|++++ + +.++ ..++|.|.|++
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~--p~~~l~i~G~~~~--~-----------l~~~-----~~~~v~~~g~~ 61 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKH--PDIELIIIGNGPD--E-----------LKRL-----RRPNVRFHGFV 61 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHS--TTEEEEEECESS---H-----------HCCH-----HHCTEEEE-S-
T ss_pred cccccccccccccccccchhhhHHHHHHHHC--cCEEEEEEeCCHH--H-----------HHHh-----cCCCEEEcCCH
Confidence 367999999999999999999 999997544 46665 7788654 1 1122 23589999998
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcCC-CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHH
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLV 631 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~-~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll 631 (1057)
+++.++|+.| |++|+|+. .++++++++|||++|+|||+++. +..+++.....|+++ ++|+++++++|.+++
T Consensus 62 --~e~~~~l~~~----dv~l~p~~~~~~~~~k~~e~~~~G~pvi~~~~-~~~~~~~~~~~~~~~-~~~~~~l~~~i~~l~ 133 (135)
T PF13692_consen 62 --EELPEILAAA----DVGLIPSRFNEGFPNKLLEAMAAGKPVIASDN-GAEGIVEEDGCGVLV-ANDPEELAEAIERLL 133 (135)
T ss_dssp --HHHHHHHHC-----SEEEE-BSS-SCC-HHHHHHHCTT--EEEEHH-HCHCHS---SEEEE--TT-HHHHHHHHHHHH
T ss_pred --HHHHHHHHhC----CEEEEEeeCCCcCcHHHHHHHHhCCCEEECCc-chhhheeecCCeEEE-CCCHHHHHHHHHHHh
Confidence 5899999999 99999984 67899999999999999999999 566777656778888 889999999999998
Q ss_pred hC
Q 001541 632 AD 633 (1057)
Q Consensus 632 ~d 633 (1057)
+|
T Consensus 134 ~d 135 (135)
T PF13692_consen 134 ND 135 (135)
T ss_dssp H-
T ss_pred cC
Confidence 75
|
|
| >TIGR00215 lpxB lipid-A-disaccharide synthase | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.1e-11 Score=139.82 Aligned_cols=251 Identities=16% Similarity=0.012 Sum_probs=149.9
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+|+++.. ......+..++.+|+|+|+.+. ...+.+++ + . -+...+.+|.|++
T Consensus 88 ~kPd~vi~~g~~~~~~~~a~aa~~~gip~v~~i~-P~~waw~~----~---------~---------~r~l~~~~d~v~~ 144 (385)
T TIGR00215 88 AKPDLLVGIDAPDFNLTKELKKKDPGIKIIYYIS-PQVWAWRK----W---------R---------AKKIEKATDFLLA 144 (385)
T ss_pred cCCCEEEEeCCCCccHHHHHHHhhCCCCEEEEeC-CcHhhcCc----c---------h---------HHHHHHHHhHhhc
Confidence 67999999875 2233344467778999986552 11111000 0 0 1234567899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
+++.+.+.+.. + |+ ++.++.|++-..... .. +...
T Consensus 145 ~~~~e~~~~~~-~-----------------g~--------~~~~vGnPv~~~~~~-~~------------------~~~~ 179 (385)
T TIGR00215 145 ILPFEKAFYQK-K-----------------NV--------PCRFVGHPLLDAIPL-YK------------------PDRK 179 (385)
T ss_pred cCCCcHHHHHh-c-----------------CC--------CEEEECCchhhhccc-cC------------------CCHH
Confidence 99876554321 1 11 556777776322110 00 0011
Q ss_pred HHHHhhhCCCCCcEEEEEe--CCCC-CCCHHHHHHHHHhcccccCCCcEEE-E-EecCCCCcccchhhHHHHHHHHHHHH
Q 001541 464 SEIMRFFTNPRKPVILALA--RPDP-KKNITTLVKAFGECRPLRELANLTL-I-MGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vG--Rl~~-~Kgi~~Ll~A~~~l~~~~~~~~l~L-I-vG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
..+.++..++++++|+.++ |..+ .|++..+++|+..+.+. .+++.+ + ++++.. ...+.++..
T Consensus 180 ~~r~~lgl~~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~--~p~~~~vi~~~~~~~-----------~~~~~~~~~ 246 (385)
T TIGR00215 180 SAREKLGIDHNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQ--EPDLRRVLPVVNFKR-----------RLQFEQIKA 246 (385)
T ss_pred HHHHHcCCCCCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHh--CCCeEEEEEeCCchh-----------HHHHHHHHH
Confidence 2233455566788877663 7766 78999999999998643 345543 3 333221 233444555
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-CCCchh-------------
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGPVD------------- 604 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-~Gg~~e------------- 604 (1057)
.+++...|.+.+. +...+|++| |++|.+| |.+.+|+|++|+|+|..- ..-...
T Consensus 247 ~~~~~~~v~~~~~----~~~~~l~aA----Dl~V~~S-----Gt~tlEa~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~ 313 (385)
T TIGR00215 247 EYGPDLQLHLIDG----DARKAMFAA----DAALLAS-----GTAALEAALIKTPMVVGYRMKPLTFLIARRLVKTDYIS 313 (385)
T ss_pred HhCCCCcEEEECc----hHHHHHHhC----CEEeecC-----CHHHHHHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeee
Confidence 5655556655543 677899999 9999999 777789999999988872 211111
Q ss_pred ---hhhcCCceE-Ee-CCCCHHHHHHHHHHHHhCH----HHHHHHHHHHHHHhh
Q 001541 605 ---IHRVLDNGL-LV-DPHDQQSVADALLKLVADK----QLWARCRQNGLKNIH 649 (1057)
Q Consensus 605 ---iv~~~~~Gl-lv-~p~d~~~la~aI~~ll~d~----~~~~~~~~~~~~~v~ 649 (1057)
++.+..-.. ++ +.-+++.|++++.+++.|+ +.++++.+.-.+..+
T Consensus 314 ~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~ 367 (385)
T TIGR00215 314 LPNILANRLLVPELLQEECTPHPLAIALLLLLENGLKAYKEMHRERQFFEELRQ 367 (385)
T ss_pred ccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHH
Confidence 121111111 11 2236889999999999999 877777666555443
|
Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA |
| >PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A | Back alignment and domain information |
|---|
Probab=99.32 E-value=4.8e-12 Score=127.19 Aligned_cols=160 Identities=26% Similarity=0.312 Sum_probs=87.5
Q ss_pred CcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccccc
Q 001541 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAK 270 (1057)
Q Consensus 191 GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k 270 (1057)
||+++|+.+|+++|++.| |+|+|+|+....... .....++.++++|..+.. .
T Consensus 1 GG~~~~~~~l~~~L~~~G--~~V~v~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~-~--- 52 (160)
T PF13579_consen 1 GGIERYVRELARALAARG--HEVTVVTPQPDPEDD----------------------EEEEDGVRVHRLPLPRRP-W--- 52 (160)
T ss_dssp SHHHHHHHHHHHHHHHTT---EEEEEEE---GGG-----------------------SEEETTEEEEEE--S-SS-S---
T ss_pred CCHHHHHHHHHHHHHHCC--CEEEEEecCCCCccc----------------------ccccCCceEEeccCCccc-h---
Confidence 899999999999999999 999999976422110 011258999999876542 1
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHh
Q 001541 271 ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQ 350 (1057)
Q Consensus 271 ~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~ 350 (1057)
.+.. ..+...+..+ +. ....+||+||+|++.++.++.++++..++|+|++.|+.......
T Consensus 53 --~~~~-~~~~~~~~~~-------l~-----~~~~~~Dvv~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~~~~----- 112 (160)
T PF13579_consen 53 --PLRL-LRFLRRLRRL-------LA-----ARRERPDVVHAHSPTAGLVAALARRRRGIPLVVTVHGTLFRRGS----- 112 (160)
T ss_dssp --GGGH-CCHHHHHHHH-------CH-----HCT---SEEEEEHHHHHHHHHHHHHHHT--EEEE-SS-T----------
T ss_pred --hhhh-HHHHHHHHHH-------Hh-----hhccCCeEEEecccchhHHHHHHHHccCCcEEEEECCCchhhcc-----
Confidence 0000 1111111111 10 01267999999997666667666657799999999986432210
Q ss_pred hhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCC
Q 001541 351 ARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP 430 (1057)
Q Consensus 351 g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpn 430 (1057)
.....+.++ .|+.+++.||.|+++|+...+.+.. +. .+.+++.||||
T Consensus 113 --------~~~~~~~~~--~~~~~~~~ad~vi~~S~~~~~~l~~-~g----------------------~~~~ri~vipn 159 (160)
T PF13579_consen 113 --------RWKRRLYRW--LERRLLRRADRVIVVSEAMRRYLRR-YG----------------------VPPDRIHVIPN 159 (160)
T ss_dssp ---------HHHHHHHH--HHHHHHHH-SEEEESSHHHHHHHHH-H-------------------------GGGEEE---
T ss_pred --------chhhHHHHH--HHHHHHhcCCEEEECCHHHHHHHHH-hC----------------------CCCCcEEEeCc
Confidence 001112233 3678999999999999998887665 33 22339999999
Q ss_pred C
Q 001541 431 G 431 (1057)
Q Consensus 431 G 431 (1057)
|
T Consensus 160 G 160 (160)
T PF13579_consen 160 G 160 (160)
T ss_dssp -
T ss_pred C
Confidence 8
|
|
| >PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.9e-09 Score=124.30 Aligned_cols=308 Identities=10% Similarity=0.082 Sum_probs=177.9
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
-|||+..-...+|++|.+.| |+|.++++... .. .+ .....|+.++.++..+.
T Consensus 10 GTGGHi~Pala~a~~l~~~g--~~v~~vg~~~~---~e------~~-------------l~~~~g~~~~~~~~~~l---- 61 (352)
T PRK12446 10 GSAGHVTPNLAIIPYLKEDN--WDISYIGSHQG---IE------KT-------------IIEKENIPYYSISSGKL---- 61 (352)
T ss_pred CcHHHHHHHHHHHHHHHhCC--CEEEEEECCCc---cc------cc-------------cCcccCCcEEEEeccCc----
Confidence 39999999999999999988 99999986531 10 00 11112566666654332
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHH
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLL 348 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~ 348 (1057)
++...|..+ .+...++..+.+..+.+++ .+||+||++...++..+.+.++.+++|+++.-.+..+..
T Consensus 62 ~~~~~~~~~-~~~~~~~~~~~~~~~i~~~-------~kPdvvi~~Ggy~s~p~~~aa~~~~~p~~i~e~n~~~g~----- 128 (352)
T PRK12446 62 RRYFDLKNI-KDPFLVMKGVMDAYVRIRK-------LKPDVIFSKGGFVSVPVVIGGWLNRVPVLLHESDMTPGL----- 128 (352)
T ss_pred CCCchHHHH-HHHHHHHHHHHHHHHHHHh-------cCCCEEEecCchhhHHHHHHHHHcCCCEEEECCCCCccH-----
Confidence 111111111 1111222223333333443 789999999877777778888899999987666543211
Q ss_pred HhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEe
Q 001541 349 KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAII 428 (1057)
Q Consensus 349 ~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VI 428 (1057)
.. +...+.|+.|+++-+.... .+++ .++.++
T Consensus 129 ----------------~n-----r~~~~~a~~v~~~f~~~~~-------~~~~---------------------~k~~~t 159 (352)
T PRK12446 129 ----------------AN-----KIALRFASKIFVTFEEAAK-------HLPK---------------------EKVIYT 159 (352)
T ss_pred ----------------HH-----HHHHHhhCEEEEEccchhh-------hCCC---------------------CCeEEE
Confidence 11 1246678888776432111 1111 267777
Q ss_pred CCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHH-HHHHHhcccccCCC
Q 001541 429 PPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTL-VKAFGECRPLRELA 507 (1057)
Q Consensus 429 pnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~L-l~A~~~l~~~~~~~ 507 (1057)
.|++..+..... .......+...+++++||.+|.=--.+.+..+ .+++..+. ...
T Consensus 160 G~Pvr~~~~~~~---------------------~~~~~~~~~l~~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~---~~~ 215 (352)
T PRK12446 160 GSPVREEVLKGN---------------------REKGLAFLGFSRKKPVITIMGGSLGAKKINETVREALPELL---LKY 215 (352)
T ss_pred CCcCCccccccc---------------------chHHHHhcCCCCCCcEEEEECCccchHHHHHHHHHHHHhhc---cCc
Confidence 777755332110 00112233445678888888764445555433 33444442 223
Q ss_pred cEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHH
Q 001541 508 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1057)
Q Consensus 508 ~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEA 587 (1057)
+++.++|..+ . ++... .+ ..+...+++ .++++++|+.| |++|.- +-+.++.|+
T Consensus 216 ~vv~~~G~~~-~-----------~~~~~---~~---~~~~~~~f~-~~~m~~~~~~a----dlvIsr----~G~~t~~E~ 268 (352)
T PRK12446 216 QIVHLCGKGN-L-----------DDSLQ---NK---EGYRQFEYV-HGELPDILAIT----DFVISR----AGSNAIFEF 268 (352)
T ss_pred EEEEEeCCch-H-----------HHHHh---hc---CCcEEecch-hhhHHHHHHhC----CEEEEC----CChhHHHHH
Confidence 4444666542 1 11111 11 122333542 25899999999 988854 457899999
Q ss_pred HHcCCcEEEcCCC-----C----chhhhhcCCceEEeCCC--CHHHHHHHHHHHHhCHHHH
Q 001541 588 AAHGLPIVATKNG-----G----PVDIHRVLDNGLLVDPH--DQQSVADALLKLVADKQLW 637 (1057)
Q Consensus 588 mA~G~PVVat~~G-----g----~~eiv~~~~~Gllv~p~--d~~~la~aI~~ll~d~~~~ 637 (1057)
+++|+|+|.-... + ..+.+...+.|..+... +++.+.++|.+++.|++.+
T Consensus 269 ~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~~g~~~~l~~~~~~~~~l~~~l~~ll~~~~~~ 329 (352)
T PRK12446 269 LTLQKPMLLIPLSKFASRGDQILNAESFERQGYASVLYEEDVTVNSLIKHVEELSHNNEKY 329 (352)
T ss_pred HHcCCCEEEEcCCCCCCCchHHHHHHHHHHCCCEEEcchhcCCHHHHHHHHHHHHcCHHHH
Confidence 9999999987542 1 11233444556666433 5789999999999988654
|
|
| >COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.8e-09 Score=120.84 Aligned_cols=334 Identities=15% Similarity=0.121 Sum_probs=203.6
Q ss_pred CCCcHHHHHHHHHHHHhcCCCeee-EEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccc
Q 001541 189 DTGGQVKYVVELARALGSMPGVYR-VDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 267 (1057)
Q Consensus 189 d~GG~~~~v~~LA~aLa~~Ggv~~-V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~ 267 (1057)
-|||+..-...|+++|.++| ++ |.++.... .. . .......++.++.++.++..++
T Consensus 9 GTGGHv~pAlAl~~~l~~~g--~~~v~~~~~~~---~~-------e------------~~l~~~~~~~~~~I~~~~~~~~ 64 (357)
T COG0707 9 GTGGHVFPALALAEELAKRG--WEQVIVLGTGD---GL-------E------------AFLVKQYGIEFELIPSGGLRRK 64 (357)
T ss_pred CCccchhHHHHHHHHHHhhC--ccEEEEecccc---cc-------e------------eeeccccCceEEEEeccccccc
Confidence 49999999999999999999 85 55552211 00 0 0111123778888887654222
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHH
Q 001541 268 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 347 (1057)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1057)
..+..+... -..+.-+.+..+.|++ .+||+|.+........+.+.+..+++|+++...+.-....
T Consensus 65 ----~~~~~~~~~-~~~~~~~~~a~~il~~-------~kPd~vig~Ggyvs~P~~~Aa~~~~iPv~ihEqn~~~G~a--- 129 (357)
T COG0707 65 ----GSLKLLKAP-FKLLKGVLQARKILKK-------LKPDVVIGTGGYVSGPVGIAAKLLGIPVIIHEQNAVPGLA--- 129 (357)
T ss_pred ----CcHHHHHHH-HHHHHHHHHHHHHHHH-------cCCCEEEecCCccccHHHHHHHhCCCCEEEEecCCCcchh---
Confidence 222211111 2333344445555555 7899999988777777778888899999999888755431
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
++ +..+.|+.|.+.-.. ... +.+..++.+
T Consensus 130 --------------nk---------~~~~~a~~V~~~f~~-~~~---------------------------~~~~~~~~~ 158 (357)
T COG0707 130 --------------NK---------ILSKFAKKVASAFPK-LEA---------------------------GVKPENVVV 158 (357)
T ss_pred --------------HH---------HhHHhhceeeecccc-ccc---------------------------cCCCCceEE
Confidence 11 234556666665432 110 111125777
Q ss_pred eCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Q 001541 428 IPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELA 507 (1057)
Q Consensus 428 IpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~ 507 (1057)
..+++..+.+. .... ..++....++++|+.+|.=--.+.+..++....... .+..
T Consensus 159 tG~Pvr~~~~~-~~~~----------------------~~~~~~~~~~~~ilV~GGS~Ga~~ln~~v~~~~~~l--~~~~ 213 (357)
T COG0707 159 TGIPVRPEFEE-LPAA----------------------EVRKDGRLDKKTILVTGGSQGAKALNDLVPEALAKL--ANRI 213 (357)
T ss_pred ecCcccHHhhc-cchh----------------------hhhhhccCCCcEEEEECCcchhHHHHHHHHHHHHHh--hhCe
Confidence 87777665443 1100 011111227888888886433333444333333221 1122
Q ss_pred cEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHH
Q 001541 508 NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEA 587 (1057)
Q Consensus 508 ~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEA 587 (1057)
.++.+.|... ..++......++. +...++ .++++++|++| |++|.= +-++|+.|.
T Consensus 214 ~v~~~~G~~~------------~~~~~~~~~~~~~---~~v~~f--~~dm~~~~~~A----DLvIsR----aGa~Ti~E~ 268 (357)
T COG0707 214 QVIHQTGKND------------LEELKSAYNELGV---VRVLPF--IDDMAALLAAA----DLVISR----AGALTIAEL 268 (357)
T ss_pred EEEEEcCcch------------HHHHHHHHhhcCc---EEEeeH--HhhHHHHHHhc----cEEEeC----CcccHHHHH
Confidence 3323444432 2344444454544 667777 57899999999 998854 357999999
Q ss_pred HHcCCcEEEcCCCCc--------hhhhhcCCceEEeCCCC--HHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHH
Q 001541 588 AAHGLPIVATKNGGP--------VDIHRVLDNGLLVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHC 657 (1057)
Q Consensus 588 mA~G~PVVat~~Gg~--------~eiv~~~~~Gllv~p~d--~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a 657 (1057)
+++|+|+|--..+.. ...+++.+.|++++..+ ++.+.+.|.+++.+|+..++|..++++....-.-+.++
T Consensus 269 ~a~g~P~IliP~p~~~~~~Q~~NA~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~~~~l~~m~~~a~~~~~p~aa~~i~ 348 (357)
T COG0707 269 LALGVPAILVPYPPGADGHQEYNAKFLEKAGAALVIRQSELTPEKLAELILRLLSNPEKLKAMAENAKKLGKPDAAERIA 348 (357)
T ss_pred HHhCCCEEEeCCCCCccchHHHHHHHHHhCCCEEEeccccCCHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 999999998764433 22344556777776555 88999999999999999999999988876555555555
Q ss_pred HHHHH
Q 001541 658 KTYLS 662 (1057)
Q Consensus 658 ~~~l~ 662 (1057)
...+.
T Consensus 349 ~~~~~ 353 (357)
T COG0707 349 DLLLA 353 (357)
T ss_pred HHHHH
Confidence 44443
|
|
| >PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.1e-11 Score=124.66 Aligned_cols=169 Identities=19% Similarity=0.250 Sum_probs=86.5
Q ss_pred CCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccc
Q 001541 188 SDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKY 267 (1057)
Q Consensus 188 ~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~ 267 (1057)
+..||+++++.+|+++|+++| |+|++++....++... .........+....
T Consensus 9 ~~~GG~e~~~~~l~~~l~~~G--~~v~v~~~~~~~~~~~------------------------~~~~~~~~~~~~~~--- 59 (177)
T PF13439_consen 9 PNIGGAERVVLNLARALAKRG--HEVTVVSPGVKDPIEE------------------------ELVKIFVKIPYPIR--- 59 (177)
T ss_dssp TSSSHHHHHHHHHHHHHHHTT---EEEEEESS-TTS-SS------------------------TEEEE---TT-SST---
T ss_pred CCCChHHHHHHHHHHHHHHCC--CEEEEEEcCCCccchh------------------------hccceeeeeecccc---
Confidence 579999999999999999999 9999998764322110 00011111111110
Q ss_pred cccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHH
Q 001541 268 IAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQL 347 (1057)
Q Consensus 268 l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l 347 (1057)
.... ..+.....+.+.+.+ .+|||||+|.+.....+..... ++|+|+|.|+..... ..
T Consensus 60 ------~~~~-----~~~~~~~~~~~~i~~-------~~~DiVh~~~~~~~~~~~~~~~--~~~~v~~~H~~~~~~--~~ 117 (177)
T PF13439_consen 60 ------KRFL-----RSFFFMRRLRRLIKK-------EKPDIVHIHGPPAFWIALLACR--KVPIVYTIHGPYFER--RF 117 (177)
T ss_dssp ------SS-------HHHHHHHHHHHHHHH-------HT-SEEECCTTHCCCHHHHHHH--CSCEEEEE-HHH--H--HT
T ss_pred ------cccc-----hhHHHHHHHHHHHHH-------cCCCeEEecccchhHHHHHhcc--CCCEEEEeCCCcccc--cc
Confidence 0011 111112223333333 4699999998744333333333 999999999976320 00
Q ss_pred HHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEE
Q 001541 348 LKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAI 427 (1057)
Q Consensus 348 ~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~V 427 (1057)
.. . ... ....+..+ .+...++.+|.+||+|+...+++.+ ++ .+..++.|
T Consensus 118 ~~-~--~~~---~~~~~~~~--~~~~~~~~~~~ii~vS~~~~~~l~~-~~----------------------~~~~ki~v 166 (177)
T PF13439_consen 118 LK-S--KLS---PYSYLNFR--IERKLYKKADRIIAVSESTKDELIK-FG----------------------IPPEKIHV 166 (177)
T ss_dssp TT-T--SCC---CHHHHHHC--TTHHHHCCSSEEEESSHHHHHHHHH-HT------------------------SS-EEE
T ss_pred cc-c--ccc---hhhhhhhh--hhhhHHhcCCEEEEECHHHHHHHHH-hC----------------------CcccCCEE
Confidence 00 0 000 01111111 1334589999999999998888765 43 22248999
Q ss_pred eCCCCCCCCcC
Q 001541 428 IPPGMEFHHIV 438 (1057)
Q Consensus 428 IpnGiD~~~f~ 438 (1057)
||||||.+.|.
T Consensus 167 I~ngid~~~F~ 177 (177)
T PF13439_consen 167 IYNGIDTDRFR 177 (177)
T ss_dssp ----B-CCCH-
T ss_pred EECCccHHHcC
Confidence 99999999873
|
|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Probab=99.26 E-value=2.7e-11 Score=111.49 Aligned_cols=91 Identities=18% Similarity=0.333 Sum_probs=86.0
Q ss_pred EEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-
Q 001541 570 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI- 648 (1057)
Q Consensus 570 v~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v- 648 (1057)
++++|+..+++++.++|+||||+|||++..++..+++.++..++.++ |++++.++|..++++|+++++++++|++.+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~ll~~~~~~~~ia~~a~~~v~ 78 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMACGTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYLLENPEERRRIAKNARERVL 78 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHCCCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999988999998 999999999999999999999999999999
Q ss_pred hcCCHHHHHHHHHH
Q 001541 649 HLFSWPEHCKTYLS 662 (1057)
Q Consensus 649 ~~fsw~~~a~~~l~ 662 (1057)
++|+|.+.++++++
T Consensus 79 ~~~t~~~~~~~il~ 92 (92)
T PF13524_consen 79 KRHTWEHRAEQILE 92 (92)
T ss_pred HhCCHHHHHHHHHC
Confidence 59999999998863
|
|
| >COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.24 E-value=1.9e-10 Score=117.03 Aligned_cols=252 Identities=14% Similarity=0.145 Sum_probs=149.1
Q ss_pred cceEEEEEecCCCCC--cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEec
Q 001541 773 RKHIFVISVDCDSTT--GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~~--~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~ 850 (1057)
..++||.|+||||.. --.+.....+..|+.. |+.||+||.-+..++..+-+.++++ +-.+|+.||+.||-+
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~----G~~Vi~~SSKT~aE~~~l~~~l~v~---~~p~iaEnG~aI~~p 78 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDA----GVPVILCSSKTRAEMLYLQKSLGVQ---GLPLIAENGAAIYLP 78 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccchHHHHHHHc----CCeEEEeccchHHHHHHHHHhcCCC---CCceeecCCceEEec
Confidence 357999999999942 2334566778888886 9999999999999999999999995 356999999999987
Q ss_pred cCCCCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccc-cccccc--c---c----cccCcceEEEEecCC
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESG-EKVLTP--A---E----QLSTNYCYAFSVQKP 920 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~-~~~~~~--~---~----~~~~~~k~~~~~~~~ 920 (1057)
.++...........-..++.-...-+.+++.+..+...+.-..-.+. ...+.+ . + .....+..+..-++.
T Consensus 79 ~~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~ 158 (274)
T COG3769 79 KGWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSS 158 (274)
T ss_pred ccccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeeccc
Confidence 54421111100111112222222223334333333221110000000 000000 0 0 000111111221211
Q ss_pred CCCccHHHHHHHHHHhcCcEEEEEeeCCeeEEEecCCCCHHHHHHHHHHHh-CCCcccEEEEecCCCCCCccccccCcce
Q 001541 921 GMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW-GVELSKMVVFVGESGDTDYEGLLGGVHK 999 (1057)
Q Consensus 921 ~~~~~~~el~~~l~~~~~~~~v~~s~~~~~lEI~p~gasKg~AL~~L~~~l-gI~~e~viaf~GD~~n~D~~eML~~ag~ 999 (1057)
+ .....+...|...+ +.+.++..+.-|+-....||+|+..|.+-+ -.+...+.+..||+.| | .+||+...+
T Consensus 159 d--~~~~~~~~~L~e~g----lt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~~r~t~~~GDg~n-D-~Pl~ev~d~ 230 (274)
T COG3769 159 D--ERMAQFTARLNERG----LTFVHGARFWHVLDASAGKGQAANWLLETYRRLGGARTTLGLGDGPN-D-APLLEVMDY 230 (274)
T ss_pred c--hHHHHHHHHHHhcC----ceEEeccceEEEeccccCccHHHHHHHHHHHhcCceeEEEecCCCCC-c-ccHHHhhhh
Confidence 1 12233445555543 345666668899999999999999997754 3444554444999999 9 999999999
Q ss_pred EEEeCCCc-hhhhhhhhhcCCCCCCCCCcCCCCCeEEccCCCChHHHHHHHHHhC
Q 001541 1000 TVILKGIC-SSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 1000 gVAMgNa~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
.++++|-. +++ .++... |-+..++..-..+|..+.|++|.
T Consensus 231 AfiV~~lnre~~--~lv~~i------------~~vv~~~~~~~~~~~~e~~~~~~ 271 (274)
T COG3769 231 AFIVKGLNREGV--HLVSSI------------PAVVERIQREGPEGWREGLDHFF 271 (274)
T ss_pred heeecccchhhh--hccccc------------hhheeeccccCchHHHHHhhhhc
Confidence 99999776 221 122222 44555667778899999999874
|
|
| >TIGR02919 accessory Sec system glycosyltransferase GtfB | Back alignment and domain information |
|---|
Probab=99.09 E-value=9e-09 Score=120.88 Aligned_cols=192 Identities=15% Similarity=0.205 Sum_probs=138.7
Q ss_pred hcCCEEEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCC
Q 001541 376 DASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNP 455 (1057)
Q Consensus 376 ~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~ 455 (1057)
.+.|.||++|+++.+.+...+... .++.+||-|+=.. +. ..
T Consensus 238 ~~~~~iIv~T~~q~~di~~r~~~~-----------------------~~~~~ip~g~i~~-~~-~~-------------- 278 (438)
T TIGR02919 238 TRNKKIIIPNKNEYEKIKELLDNE-----------------------YQEQISQLGYLYP-FK-KD-------------- 278 (438)
T ss_pred cccCeEEeCCHHHHHHHHHHhCcc-----------------------cCceEEEEEEEEe-ec-cc--------------
Confidence 678999999987777655444321 1567888876522 11 00
Q ss_pred CCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHH
Q 001541 456 ASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLK 535 (1057)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~ 535 (1057)
+...+-++.++. ...|++++++.+ ..|++++-+|-+.+. ..+|.+
T Consensus 279 ----------------~r~~~~~l~~t~-------s~~I~~i~~Lv~--~lPd~~f~Iga~te~----------s~kL~~ 323 (438)
T TIGR02919 279 ----------------NKYRKQALILTN-------SDQIEHLEEIVQ--ALPDYHFHIAALTEM----------SSKLMS 323 (438)
T ss_pred ----------------cCCcccEEEECC-------HHHHHHHHHHHH--hCCCcEEEEEecCcc----------cHHHHH
Confidence 122334555551 899999999974 456777644666541 245666
Q ss_pred HHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCCceEE
Q 001541 536 LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLL 614 (1057)
Q Consensus 536 l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~~Gll 614 (1057)
+ .++ .+.+.|+|.. ..++.++|..| |+++.++..|+|++++.||+.+|+|||+.+. -|+.+++.+ |.+
T Consensus 324 L-~~y--~nvvly~~~~-~~~l~~ly~~~----dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~~~~~i~~---g~l 392 (438)
T TIGR02919 324 L-DKY--DNVKLYPNIT-TQKIQELYQTC----DIYLDINHGNEILNAVRRAFEYNLLILGFEETAHNRDFIAS---ENI 392 (438)
T ss_pred H-Hhc--CCcEEECCcC-hHHHHHHHHhc----cEEEEccccccHHHHHHHHHHcCCcEEEEecccCCcccccC---Cce
Confidence 6 666 4567777765 45899999999 9999999999999999999999999999884 466677754 889
Q ss_pred eCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCC
Q 001541 615 VDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFS 652 (1057)
Q Consensus 615 v~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fs 652 (1057)
++++++++|+++|.++|++++.+++.-..-++.+..-+
T Consensus 393 ~~~~~~~~m~~~i~~lL~d~~~~~~~~~~q~~~a~~~~ 430 (438)
T TIGR02919 393 FEHNEVDQLISKLKDLLNDPNQFRELLEQQREHANDIS 430 (438)
T ss_pred ecCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHhccCC
Confidence 99999999999999999999877765554444444333
|
Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. |
| >TIGR03492 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=99.04 E-value=8.7e-08 Score=112.19 Aligned_cols=165 Identities=19% Similarity=0.279 Sum_probs=104.5
Q ss_pred CCCcEEEEEe--C-CCCCCCHHHHHHHHHhcccccCCCcEEE--EEecCCCCcccchhhHHHHHHHHHHHHHcCCCC---
Q 001541 473 PRKPVILALA--R-PDPKKNITTLVKAFGECRPLRELANLTL--IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG--- 544 (1057)
Q Consensus 473 ~~~~~Il~vG--R-l~~~Kgi~~Ll~A~~~l~~~~~~~~l~L--IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~--- 544 (1057)
++.++|+.++ | -...++++.+++++..+.+. +++.+ .+.+..+ ...+.+.....++..
T Consensus 203 ~~~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~---~~~~~v~~~~~~~~-----------~~~~~~~l~~~g~~~~~~ 268 (396)
T TIGR03492 203 TGRFRIALLPGSRPPEAYRNLKLLLRALEALPDS---QPFVFLAAIVPSLS-----------LEKLQAILEDLGWQLEGS 268 (396)
T ss_pred CCCCEEEEECCCCHHHHHccHHHHHHHHHHHhhC---CCeEEEEEeCCCCC-----------HHHHHHHHHhcCceecCC
Confidence 3444544443 3 23457889999999999532 45544 3323332 233444444444431
Q ss_pred -----------CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch---hhhhc--
Q 001541 545 -----------QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV---DIHRV-- 608 (1057)
Q Consensus 545 -----------~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~---eiv~~-- 608 (1057)
.+.+..+ ..++.++|+.| |++|..| |.+..|++++|+|+|.....+.. .+.+.
T Consensus 269 ~~~~~~~~~~~~~~v~~~--~~~~~~~l~~A----DlvI~rS-----Gt~T~E~a~lg~P~Ilip~~~~q~na~~~~~~~ 337 (396)
T TIGR03492 269 SEDQTSLFQKGTLEVLLG--RGAFAEILHWA----DLGIAMA-----GTATEQAVGLGKPVIQLPGKGPQFTYGFAEAQS 337 (396)
T ss_pred ccccchhhccCceEEEec--hHhHHHHHHhC----CEEEECc-----CHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhhH
Confidence 2444333 36799999999 9999885 56669999999999998743331 22222
Q ss_pred --CCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHH
Q 001541 609 --LDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLS 662 (1057)
Q Consensus 609 --~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~ 662 (1057)
...++.+...+++.++++|.+++.|++.++++.+++++.. .....+.+++...+
T Consensus 338 ~l~g~~~~l~~~~~~~l~~~l~~ll~d~~~~~~~~~~~~~~lg~~~a~~~ia~~i~~ 394 (396)
T TIGR03492 338 RLLGGSVFLASKNPEQAAQVVRQLLADPELLERCRRNGQERMGPPGASARIAESILK 394 (396)
T ss_pred hhcCCEEecCCCCHHHHHHHHHHHHcCHHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 1245555567889999999999999998888876555555 44555555554433
|
This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown. |
| >cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin | Back alignment and domain information |
|---|
Probab=99.02 E-value=5.8e-08 Score=114.18 Aligned_cols=133 Identities=18% Similarity=0.093 Sum_probs=89.4
Q ss_pred HhhhCCCCCcEEEEEeCCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCC
Q 001541 467 MRFFTNPRKPVILALARPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY 543 (1057)
Q Consensus 467 ~~~~~~~~~~~Il~vGRl~~---~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~ 543 (1057)
..++.....+++++.|.... .+-...+++|+..+ ...+++.+|...... ..+.
T Consensus 232 ~~~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~-----~~~~i~~~g~~~~~~-------------------~~~~ 287 (401)
T cd03784 232 WLFLAAGRPPVYVGFGSMVVRDPEALARLDVEAVATL-----GQRAILSLGWGGLGA-------------------EDLP 287 (401)
T ss_pred HHHHhCCCCcEEEeCCCCcccCHHHHHHHHHHHHHHc-----CCeEEEEccCccccc-------------------cCCC
Confidence 33443344567788888754 34455666777654 123334556543210 2345
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCceEEeCCC-
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDPH- 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~p~- 618 (1057)
++|.+.+++++ ..+|..| |++|.- |-..++.||+++|+|+|.....+ ....+...+.|+.+++.
T Consensus 288 ~~v~~~~~~p~---~~ll~~~----d~~I~h----gG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~~G~g~~l~~~~ 356 (401)
T cd03784 288 DNVRVVDFVPH---DWLLPRC----AAVVHH----GGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAELGAGPALDPRE 356 (401)
T ss_pred CceEEeCCCCH---HHHhhhh----heeeec----CCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHHCCCCCCCCccc
Confidence 68999999764 4678889 999833 44588999999999999987665 23445556678777665
Q ss_pred -CHHHHHHHHHHHHhCH
Q 001541 619 -DQQSVADALLKLVADK 634 (1057)
Q Consensus 619 -d~~~la~aI~~ll~d~ 634 (1057)
+.++++++|.++++++
T Consensus 357 ~~~~~l~~al~~~l~~~ 373 (401)
T cd03784 357 LTAERLAAALRRLLDPP 373 (401)
T ss_pred CCHHHHHHHHHHHhCHH
Confidence 6899999999999854
|
Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics. |
| >PF09314 DUF1972: Domain of unknown function (DUF1972); InterPro: IPR015393 This domain is functionally uncharacterised and found in bacterial glycosyltransferases and rhamnosyltransferases | Back alignment and domain information |
|---|
Probab=98.99 E-value=5e-08 Score=100.55 Aligned_cols=180 Identities=17% Similarity=0.122 Sum_probs=114.2
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCcccc
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
+|++|...|. ++..||.+++|.+|+..|.+.| ++|+|+++....+..
T Consensus 3 kIaIiGtrGI----------Pa~YGGfET~ve~L~~~l~~~g--~~v~Vyc~~~~~~~~--------------------- 49 (185)
T PF09314_consen 3 KIAIIGTRGI----------PARYGGFETFVEELAPRLVSKG--IDVTVYCRSDYYPYK--------------------- 49 (185)
T ss_pred eEEEEeCCCC----------CcccCcHHHHHHHHHHHHhcCC--ceEEEEEccCCCCCC---------------------
Confidence 7999998887 3568999999999999999999 999999986432211
Q ss_pred ccCCCCCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch-HHHHHHH
Q 001541 247 DMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG-DSAALLS 325 (1057)
Q Consensus 247 ~~~~~~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~-~~a~~l~ 325 (1057)
..+..|++++.+|.... . .+..+...++..+. ++... + .+..+.||||.+....+ .+..++.
T Consensus 50 -~~~y~gv~l~~i~~~~~-g---------~~~si~yd~~sl~~----al~~~-~-~~~~~~~ii~ilg~~~g~~~~~~~r 112 (185)
T PF09314_consen 50 -EFEYNGVRLVYIPAPKN-G---------SAESIIYDFLSLLH----ALRFI-K-QDKIKYDIILILGYGIGPFFLPFLR 112 (185)
T ss_pred -CcccCCeEEEEeCCCCC-C---------chHHHHHHHHHHHH----HHHHH-h-hccccCCEEEEEcCCccHHHHHHHH
Confidence 12236999999986432 1 12233322222221 11100 0 01135789999887644 3444443
Q ss_pred h--cCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHH
Q 001541 326 G--ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1057)
Q Consensus 326 ~--~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~ 403 (1057)
. ..|.|++++.|++..... ++. ...+...++ .|+.+.+.||.+|+-|+...+.+...|..
T Consensus 113 ~~~~~g~~v~vN~DGlEWkR~---------KW~---~~~k~~lk~-~E~~avk~ad~lIaDs~~I~~y~~~~y~~----- 174 (185)
T PF09314_consen 113 KLRKKGGKVVVNMDGLEWKRA---------KWG---RPAKKYLKF-SEKLAVKYADRLIADSKGIQDYIKERYGR----- 174 (185)
T ss_pred hhhhcCCcEEECCCcchhhhh---------hcC---HHHHHHHHH-HHHHHHHhCCEEEEcCHHHHHHHHHHcCC-----
Confidence 3 347799999999865331 111 111122222 57789999999999999866665555541
Q ss_pred HHHHHHhHhccccccCCCCCcEEEeCCCCC
Q 001541 404 ERKLRARIKRNVSCYGKFMPRMAIIPPGME 433 (1057)
Q Consensus 404 ~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD 433 (1057)
++..+||.|.|
T Consensus 175 -------------------~~s~~IaYGad 185 (185)
T PF09314_consen 175 -------------------KKSTFIAYGAD 185 (185)
T ss_pred -------------------CCcEEecCCCC
Confidence 27899999986
|
|
| >PRK11133 serB phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.6e-08 Score=114.24 Aligned_cols=71 Identities=13% Similarity=0.165 Sum_probs=59.2
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEc
Q 001541 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQT 1036 (1057)
Q Consensus 957 gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~v 1036 (1057)
+..|+.+++.+++++|++++++++ +||+.| | ++|++.||+|||| ||. ...+..|+ ++
T Consensus 246 ~k~K~~~L~~la~~lgi~~~qtIa-VGDg~N-D-l~m~~~AGlgiA~-nAk--p~Vk~~Ad-----------------~~ 302 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLAQTVA-IGDGAN-D-LPMIKAAGLGIAY-HAK--PKVNEQAQ-----------------VT 302 (322)
T ss_pred cccHHHHHHHHHHHcCCChhhEEE-EECCHH-H-HHHHHHCCCeEEe-CCC--HHHHhhCC-----------------EE
Confidence 357999999999999999999999 888888 8 9999999999999 998 33333333 46
Q ss_pred cCCCChHHHHHHHH
Q 001541 1037 PEDCTTSDIRSSLE 1050 (1057)
Q Consensus 1037 t~~~~~dgI~~aL~ 1050 (1057)
+.+.+-+||..-|-
T Consensus 303 i~~~~l~~~l~~~~ 316 (322)
T PRK11133 303 IRHADLMGVLCILS 316 (322)
T ss_pred ecCcCHHHHHHHhc
Confidence 67888899888763
|
|
| >PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2 | Back alignment and domain information |
|---|
Probab=98.84 E-value=4e-09 Score=115.27 Aligned_cols=213 Identities=17% Similarity=0.100 Sum_probs=107.1
Q ss_pred EEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCC-----
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNS----- 241 (1057)
Q Consensus 167 ~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~----- 241 (1057)
||++|+.... .-..+||...++..|+++|+++| |+|.|+++.+..-........+...+.-.-.
T Consensus 1 kIl~vt~E~~---------P~~k~GGLgdv~~~L~kaL~~~G--~~V~Vi~P~y~~~~~~~~~~~~~~~~~~~~~~~v~~ 69 (245)
T PF08323_consen 1 KILMVTSEYA---------PFAKVGGLGDVVGSLPKALAKQG--HDVRVIMPKYGFIDEEYFQLEPVRRLSVPFGGPVPV 69 (245)
T ss_dssp EEEEE-S-BT---------TTB-SSHHHHHHHHHHHHHHHTT---EEEEEEE-THHHHHHCTTEEEEEEES-STTCEEEE
T ss_pred CEEEEEcccC---------cccccCcHhHHHHHHHHHHHhcC--CeEEEEEccchhhhhhhhcceEEEEecccccccccc
Confidence 7999986443 22589999999999999999999 9999999876321100000000000000000
Q ss_pred ---CccccccCCCCCeEEEEccCCCcccccccccCCCC-hhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc
Q 001541 242 ---DDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPH-IPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA 317 (1057)
Q Consensus 242 ---~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l~~~-l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~ 317 (1057)
..+.-.....+|+.++.+... .+..+..+... -..+.+...++. -++++..+.+... ..+|||||+|.|.+
T Consensus 70 ~~~~~~~v~~~~~~~v~v~~i~~~---~~f~r~~iY~~~~~~~~d~~~rf~-~fs~a~le~~~~l-~~~pDIIH~hDW~t 144 (245)
T PF08323_consen 70 GVWYEVRVYRYPVDGVPVYFIDNP---EYFDRPGIYGDNGGDYPDNAERFA-FFSRAALELLKKL-GWKPDIIHCHDWHT 144 (245)
T ss_dssp E----EEEEEEEETTEEEEEEESH---HHHGSSSSSBSTSSBHTTHHHHHH-HHHHHHHHHHCTC-T-S-SEEEEECGGG
T ss_pred ccceEEEEEEEEcCCccEEEecCh---hhccccceeccCCCcchhHHHHHH-HHHHHHHHHHHhh-CCCCCEEEecCchH
Confidence 000000011246776665532 12233332211 001222222222 1233444444432 24799999999999
Q ss_pred hHHHHHHHhcC-------CCCEEEEecCCchhhHH---HHHHhhhcchHHH--HHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 318 GDSAALLSGAL-------NVPMLFTGHSLGRDKLE---QLLKQARLSRDEI--NATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 318 ~~~a~~l~~~~-------~iP~V~t~H~l~~~~~~---~l~~~g~~~~~~~--~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
+.++.+++... ++|+|+|+|++..+-.. .+...|. +.... ...+.....+...+..+..||.|+|+|
T Consensus 145 al~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~~~~~~~gl-~~~~~~~~~~~~~~~~in~lk~gi~~AD~v~TVS 223 (245)
T PF08323_consen 145 ALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPPEDLKALGL-PDEYFQNLDEYEFYGQINFLKAGIVYADKVTTVS 223 (245)
T ss_dssp TTHHHHHHHCCSS------SEEEEEESSTT---EEEGGGGGCTT--GGGGS-STTTTEETTEEEHHHHHHHHSSEEEESS
T ss_pred HHHHHHhccccccccccccceeEEEEcccccCCcCCHHHHHHcCC-CHHHhccccccccccccCHHHHHHHhcCEeeeCC
Confidence 99999998776 59999999997442210 0000000 00000 000001112223456899999999999
Q ss_pred HHHHHHHHhhh
Q 001541 386 RQEIEEQWRLY 396 (1057)
Q Consensus 386 ~~~~~~~~~~y 396 (1057)
+..+++....+
T Consensus 224 ~~Ya~Ei~~~~ 234 (245)
T PF08323_consen 224 PTYAREIQTPE 234 (245)
T ss_dssp HHHHHHTTSHH
T ss_pred HHHHHHHhCcc
Confidence 99988876543
|
4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A .... |
| >TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.4e-08 Score=102.88 Aligned_cols=72 Identities=13% Similarity=0.079 Sum_probs=58.4
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPE 1038 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~ 1038 (1057)
+|..++..+++++|++++++++ +||+.| | ++|++.+|.+++|.|+.+ ..+ +.+.+++.
T Consensus 76 ~k~~~~~~~~~~~~~~~~~~~~-vGDs~~-D-~~~~~~ag~~~~v~~~~~--~~~-----------------~~a~~i~~ 133 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPENVAY-IGDDLI-D-WPVMEKVGLSVAVADAHP--LLI-----------------PRADYVTR 133 (154)
T ss_pred chHHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCCcCH--HHH-----------------HhCCEEec
Confidence 3788999999999999999888 999999 9 999999999999999982 212 23345777
Q ss_pred CCChHH-HHHHHHHh
Q 001541 1039 DCTTSD-IRSSLEQL 1052 (1057)
Q Consensus 1039 ~~~~dg-I~~aL~~~ 1052 (1057)
+...+| ++++++++
T Consensus 134 ~~~~~g~~~~~~~~~ 148 (154)
T TIGR01670 134 IAGGRGAVREVCELL 148 (154)
T ss_pred CCCCCcHHHHHHHHH
Confidence 776444 99998875
|
The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved. |
| >TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit | Back alignment and domain information |
|---|
Probab=98.80 E-value=1.4e-08 Score=104.11 Aligned_cols=70 Identities=11% Similarity=0.094 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCCCCeEEccC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPE 1038 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~~~~~~vt~ 1038 (1057)
.|...++.+++++|++++++++ +||+.| | ++|++.+|+++||+||. .+.+.+++ +|+.
T Consensus 82 pkp~~~~~~~~~l~~~~~ev~~-iGD~~n-D-i~~~~~ag~~~am~nA~--~~lk~~A~-----------------~I~~ 139 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDAEVCY-VGDDLV-D-LSMMKRVGLAVAVGDAV--ADVKEAAA-----------------YVTT 139 (169)
T ss_pred CCHHHHHHHHHHcCcCHHHEEE-ECCCHH-H-HHHHHHCCCeEECcCch--HHHHHhCC-----------------EEcC
Confidence 3567899999999999999998 888888 8 99999999999999999 33333333 4777
Q ss_pred CCChHHH-HHHHH
Q 001541 1039 DCTTSDI-RSSLE 1050 (1057)
Q Consensus 1039 ~~~~dgI-~~aL~ 1050 (1057)
.+..+|+ ...++
T Consensus 140 ~~~~~g~v~e~~e 152 (169)
T TIGR02726 140 ARGGHGAVREVAE 152 (169)
T ss_pred CCCCCCHHHHHHH
Confidence 6777664 44333
|
Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases. |
| >TIGR01426 MGT glycosyltransferase, MGT family | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.9e-06 Score=97.65 Aligned_cols=111 Identities=20% Similarity=0.193 Sum_probs=76.6
Q ss_pred CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhhhcCCceEEeCCC
Q 001541 543 YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIHRVLDNGLLVDPH 618 (1057)
Q Consensus 543 ~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~----eiv~~~~~Gllv~p~ 618 (1057)
.++|.+.+++++. +++..| |++|..+ |. .++.||+++|+|+|+....+-. ..+...+.|..++..
T Consensus 274 ~~~v~~~~~~p~~---~ll~~~----~~~I~hg---G~-~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~~g~g~~l~~~ 342 (392)
T TIGR01426 274 PPNVEVRQWVPQL---EILKKA----DAFITHG---GM-NSTMEALFNGVPMVAVPQGADQPMTARRIAELGLGRHLPPE 342 (392)
T ss_pred CCCeEEeCCCCHH---HHHhhC----CEEEECC---Cc-hHHHHHHHhCCCEEecCCcccHHHHHHHHHHCCCEEEeccc
Confidence 4678888998753 778888 9988653 33 4789999999999997755433 234455677777643
Q ss_pred --CHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 001541 619 --DQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 619 --d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~ 664 (1057)
+.++++++|.+++.+++.++++.+-+.+....-.-+..++.+.+++
T Consensus 343 ~~~~~~l~~ai~~~l~~~~~~~~~~~l~~~~~~~~~~~~aa~~i~~~~ 390 (392)
T TIGR01426 343 EVTAEKLREAVLAVLSDPRYAERLRKMRAEIREAGGARRAADEIEGFL 390 (392)
T ss_pred cCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHhh
Confidence 5789999999999998766555443333334445566665555443
|
This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. |
| >COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.1e-05 Score=91.78 Aligned_cols=264 Identities=16% Similarity=0.206 Sum_probs=164.0
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||++...-...-+....-++..|+|+++----+ +.... ..|+...++ .+.++...|.|++.
T Consensus 122 ~~P~l~Ii~EtElWPnli~e~~~~~~p~~LvNaRL--------------S~rS~-~~y~k~~~~--~~~~~~~i~li~aQ 184 (419)
T COG1519 122 WRPKLLIIMETELWPNLINELKRRGIPLVLVNARL--------------SDRSF-ARYAKLKFL--ARLLFKNIDLILAQ 184 (419)
T ss_pred cCCCEEEEEeccccHHHHHHHHHcCCCEEEEeeee--------------chhhh-HHHHHHHHH--HHHHHHhcceeeec
Confidence 46998776543222233344556799987643222 11111 122222222 45679999999999
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS 464 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~ 464 (1057)
|+...+++..+... ++.+.-| +-++ .... ........
T Consensus 185 se~D~~Rf~~LGa~-------------------------~v~v~GN-lKfd--~~~~---------------~~~~~~~~ 221 (419)
T COG1519 185 SEEDAQRFRSLGAK-------------------------PVVVTGN-LKFD--IEPP---------------PQLAAELA 221 (419)
T ss_pred CHHHHHHHHhcCCc-------------------------ceEEecc-eeec--CCCC---------------hhhHHHHH
Confidence 99888876554211 3555544 1111 1100 01222334
Q ss_pred HHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCC
Q 001541 465 EIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~ 544 (1057)
..+..+..+ ++++++.+.- ..--+.+++++..+++ ..+++.+|+-.+.. +-...+.+++.+.|+.-
T Consensus 222 ~~r~~l~~~-r~v~iaaSTH--~GEeei~l~~~~~l~~--~~~~~llIlVPRHp---------ERf~~v~~l~~~~gl~~ 287 (419)
T COG1519 222 ALRRQLGGH-RPVWVAASTH--EGEEEIILDAHQALKK--QFPNLLLILVPRHP---------ERFKAVENLLKRKGLSV 287 (419)
T ss_pred HHHHhcCCC-CceEEEecCC--CchHHHHHHHHHHHHh--hCCCceEEEecCCh---------hhHHHHHHHHHHcCCeE
Confidence 444444333 8999999983 2334568899999875 44566655444321 23677888888888721
Q ss_pred CEEeCCC----CC--------CCcHHHHHHHhhcCCcEEEEc-CCCCCCCHHHHHHHHcCCcEEEcCC-CCchhh---hh
Q 001541 545 QVAYPKH----HK--------QSDVPEIYRLAAKTKGVFINP-AFIEPFGLTLIEAAAHGLPIVATKN-GGPVDI---HR 607 (1057)
Q Consensus 545 ~V~f~g~----v~--------~~dl~~ly~~Aa~~~dv~v~p-s~~Egfgl~~lEAmA~G~PVVat~~-Gg~~ei---v~ 607 (1057)
..+-.. .+ --++..+|+.| |++++- |+.+--|=-++|++++|+|||.-.. -...|+ +.
T Consensus 288 -~~rS~~~~~~~~tdV~l~DtmGEL~l~y~~a----diAFVGGSlv~~GGHN~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~ 362 (419)
T COG1519 288 -TRRSQGDPPFSDTDVLLGDTMGELGLLYGIA----DIAFVGGSLVPIGGHNPLEPAAFGTPVIFGPYTFNFSDIAERLL 362 (419)
T ss_pred -EeecCCCCCCCCCcEEEEecHhHHHHHHhhc----cEEEECCcccCCCCCChhhHHHcCCCEEeCCccccHHHHHHHHH
Confidence 221111 11 23899999999 777665 6766557789999999999999653 233333 33
Q ss_pred cCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhh
Q 001541 608 VLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH 649 (1057)
Q Consensus 608 ~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~ 649 (1057)
..+.|+.|+ |.+.+++++..++++++.++++++++...+.
T Consensus 363 ~~ga~~~v~--~~~~l~~~v~~l~~~~~~r~~~~~~~~~~v~ 402 (419)
T COG1519 363 QAGAGLQVE--DADLLAKAVELLLADEDKREAYGRAGLEFLA 402 (419)
T ss_pred hcCCeEEEC--CHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 445678887 6899999999999999999999999999884
|
|
| >TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing | Back alignment and domain information |
|---|
Probab=98.74 E-value=7.1e-06 Score=95.23 Aligned_cols=264 Identities=17% Similarity=0.132 Sum_probs=150.6
Q ss_pred CcceEEEEcC-CCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHY-ADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~-~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+|.+|. ......+++.+..+++|+++..-+.-... . . ++ ..|++ .-+-|+..++
T Consensus 92 ~~Pd~vlv~GD~~~~la~alaA~~~~IPv~HveaG~rs~~--------~-~-eE------~~r~~-----i~~la~l~f~ 150 (365)
T TIGR03568 92 LKPDLVVVLGDRFEMLAAAIAAALLNIPIAHIHGGEVTEG--------A-I-DE------SIRHA-----ITKLSHLHFV 150 (365)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHhCCcEEEEECCccCCC--------C-c-hH------HHHHH-----HHHHHhhccC
Confidence 6799999998 46777788888899999985433321100 0 0 00 11111 2344677778
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCC-CCCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP-GMEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpn-GiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+++...+.+.+ .|....++.++.| ++|.-...... ..
T Consensus 151 ~t~~~~~~L~~-----------------------eg~~~~~i~~tG~~~iD~l~~~~~~-------------------~~ 188 (365)
T TIGR03568 151 ATEEYRQRVIQ-----------------------MGEDPDRVFNVGSPGLDNILSLDLL-------------------SK 188 (365)
T ss_pred CCHHHHHHHHH-----------------------cCCCCCcEEEECCcHHHHHHhhhcc-------------------CH
Confidence 88776555432 2333347777755 55532211100 01
Q ss_pred HHHHHhhhCCCCCcEEEE-EeCC-----CCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHH
Q 001541 463 WSEIMRFFTNPRKPVILA-LARP-----DPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~-vGRl-----~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
.....++..++++++++. +-+- ...+.+..+++++..+. . ++.++.-+.+.. ...+...+..+
T Consensus 189 ~~~~~~lgl~~~~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~---~--~~~vi~P~~~p~------~~~i~~~i~~~ 257 (365)
T TIGR03568 189 EELEEKLGIDLDKPYALVTFHPVTLEKESAEEQIKELLKALDELN---K--NYIFTYPNADAG------SRIINEAIEEY 257 (365)
T ss_pred HHHHHHhCCCCCCCEEEEEeCCCcccccCchHHHHHHHHHHHHhc---c--CCEEEEeCCCCC------chHHHHHHHHH
Confidence 122233333334455443 3332 22334666666665541 1 333443222210 11223334333
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeC
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVD 616 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~ 616 (1057)
... .++|.+.+.++..++..+++.| +++|--| -|.. .||.++|+|+|+- |.-+|.+..+.|.++|
T Consensus 258 ~~~---~~~v~l~~~l~~~~~l~Ll~~a----~~vitdS----Sggi-~EA~~lg~Pvv~l--~~R~e~~~~g~nvl~v- 322 (365)
T TIGR03568 258 VNE---HPNFRLFKSLGQERYLSLLKNA----DAVIGNS----SSGI-IEAPSFGVPTINI--GTRQKGRLRADSVIDV- 322 (365)
T ss_pred hcC---CCCEEEECCCChHHHHHHHHhC----CEEEEcC----hhHH-HhhhhcCCCEEee--cCCchhhhhcCeEEEe-
Confidence 211 4679999999999999999999 8877332 2333 8999999999954 5677887778888888
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHH
Q 001541 617 PHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSR 663 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~ 663 (1057)
+.|+++|.+++.+++ ++..++.+ ... ..|.....++++.++
T Consensus 323 g~~~~~I~~a~~~~~-~~~~~~~~-----~~~~~pygdg~as~rI~~~ 364 (365)
T TIGR03568 323 DPDKEEIVKAIEKLL-DPAFKKSL-----KNVKNPYGDGNSSERIIEI 364 (365)
T ss_pred CCCHHHHHHHHHHHh-ChHHHHHH-----hhCCCCCCCChHHHHHHHh
Confidence 569999999999954 44332222 222 356656666665553
|
This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate. |
| >PF13528 Glyco_trans_1_3: Glycosyl transferase family 1 | Back alignment and domain information |
|---|
Probab=98.62 E-value=2.3e-06 Score=97.33 Aligned_cols=118 Identities=19% Similarity=0.303 Sum_probs=79.8
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001541 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 552 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v 552 (1057)
+.+.+++++|..+.. .+++++..+. ...++ ++|.... +. -.++|.+.++.
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~l~~~~----~~~~~-v~g~~~~-~~--------------------~~~ni~~~~~~ 240 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEALKALP----DYQFI-VFGPNAA-DP--------------------RPGNIHVRPFS 240 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHHHHhCC----CCeEE-EEcCCcc-cc--------------------cCCCEEEeecC
Confidence 346689999998766 6677777753 23443 4465421 00 04678887763
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcCCCCCCCH-HHHHHHHcCCcEEEcCCCCchh------hhhcCCceEEeCCC--CHHHH
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPAFIEPFGL-TLIEAAAHGLPIVATKNGGPVD------IHRVLDNGLLVDPH--DQQSV 623 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl-~~lEAmA~G~PVVat~~Gg~~e------iv~~~~~Gllv~p~--d~~~l 623 (1057)
..++.+++..| |++|..+ |. ++.|++++|+|+|.-...+..| .++..+.|..+++. +++.|
T Consensus 241 -~~~~~~~m~~a----d~vIs~~-----G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~~G~~~~~~~~~~~~~~l 310 (318)
T PF13528_consen 241 -TPDFAELMAAA----DLVISKG-----GYTTISEALALGKPALVIPRPGQDEQEYNARKLEELGLGIVLSQEDLTPERL 310 (318)
T ss_pred -hHHHHHHHHhC----CEEEECC-----CHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHHCCCeEEcccccCCHHHH
Confidence 37899999999 9988653 44 4999999999999988755333 33445567676543 56888
Q ss_pred HHHHHHH
Q 001541 624 ADALLKL 630 (1057)
Q Consensus 624 a~aI~~l 630 (1057)
+++|.++
T Consensus 311 ~~~l~~~ 317 (318)
T PF13528_consen 311 AEFLERL 317 (318)
T ss_pred HHHHhcC
Confidence 8888653
|
|
| >TIGR00661 MJ1255 conserved hypothetical protein | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.1e-06 Score=94.19 Aligned_cols=111 Identities=14% Similarity=0.211 Sum_probs=74.8
Q ss_pred CHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCC
Q 001541 489 NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTK 568 (1057)
Q Consensus 489 gi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~ 568 (1057)
+...+++++..+. ++.+++|+.+.. . + .+.+++.+.++.+ +++.++|..|
T Consensus 199 ~~~~l~~~l~~~~------~~~~i~~~~~~~-~----------------~--~~~~~v~~~~~~~-~~~~~~l~~a---- 248 (321)
T TIGR00661 199 YRYKILELLGKIA------NVKFVCYSYEVA-K----------------N--SYNENVEIRRITT-DNFKELIKNA---- 248 (321)
T ss_pred CHHHHHHHHHhCC------CeEEEEeCCCCC-c----------------c--ccCCCEEEEECCh-HHHHHHHHhC----
Confidence 5567788876652 455666643210 0 1 2236788888755 6899999999
Q ss_pred cEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchh------hhhcCCceEEeCCCCHHHHHHHHHHHHhCH
Q 001541 569 GVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD------IHRVLDNGLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 569 dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~e------iv~~~~~Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
|++|.-+ | ..++.||+++|+|+|.....+..| .+...+.|+.++..+. ++.+++...++++
T Consensus 249 d~vI~~~---G-~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~~g~~~~l~~~~~-~~~~~~~~~~~~~ 315 (321)
T TIGR00661 249 ELVITHG---G-FSLISEALSLGKPLIVIPDLGQFEQGNNAVKLEDLGCGIALEYKEL-RLLEAILDIRNMK 315 (321)
T ss_pred CEEEECC---C-hHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHHCCCEEEcChhhH-HHHHHHHhccccc
Confidence 9999765 2 246899999999999988765333 3455567888877776 5555555555543
|
This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases. |
| >PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=98.59 E-value=8.8e-08 Score=100.04 Aligned_cols=45 Identities=13% Similarity=0.124 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCc
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 1007 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~ 1007 (1057)
|..+++.+++++|++++++++ +||+.+ | ++|++.+|++++|+++.
T Consensus 97 k~~~l~~~~~~~gl~~~ev~~-VGDs~~-D-~~~a~~aG~~~~v~~~~ 141 (183)
T PRK09484 97 KLIAFSDLLEKLAIAPEQVAY-IGDDLI-D-WPVMEKVGLSVAVADAH 141 (183)
T ss_pred HHHHHHHHHHHhCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEecCChh
Confidence 557899999999999999988 888888 8 99999999999998765
|
|
| >PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like | Back alignment and domain information |
|---|
Probab=98.54 E-value=9.2e-07 Score=87.56 Aligned_cols=128 Identities=20% Similarity=0.267 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCCCcccccccccC
Q 001541 194 VKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELL 273 (1057)
Q Consensus 194 ~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l~k~~l 273 (1057)
..++..+++.|.+.| ++|+++|.....+. ....+++.+++++.+.. ..
T Consensus 10 ~~~~~~~~~~L~~~g--~~V~ii~~~~~~~~-----------------------~~~~~~i~~~~~~~~~k-------~~ 57 (139)
T PF13477_consen 10 STFIYNLAKELKKRG--YDVHIITPRNDYEK-----------------------YEIIEGIKVIRLPSPRK-------SP 57 (139)
T ss_pred HHHHHHHHHHHHHCC--CEEEEEEcCCCchh-----------------------hhHhCCeEEEEecCCCC-------cc
Confidence 457899999999999 99999998532111 11135888988864321 12
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCc-hHHHHHHHhcCC-CCEEEEecCCchhhHHHHHHhh
Q 001541 274 WPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA-GDSAALLSGALN-VPMLFTGHSLGRDKLEQLLKQA 351 (1057)
Q Consensus 274 ~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~-~~~a~~l~~~~~-iP~V~t~H~l~~~~~~~l~~~g 351 (1057)
++++ . +.++.+.+.+ .+|||||+|.+.+ +.++.++++..+ +|+|++.|+.......
T Consensus 58 ~~~~--------~-~~~l~k~ik~-------~~~DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~hg~~~~~~~------ 115 (139)
T PF13477_consen 58 LNYI--------K-YFRLRKIIKK-------EKPDVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVHGSDFYNSS------ 115 (139)
T ss_pred HHHH--------H-HHHHHHHhcc-------CCCCEEEEecCChHHHHHHHHHHHcCCCCEEEEecCCeeecCC------
Confidence 2222 1 1122333333 6799999999865 787888888888 9999999987431110
Q ss_pred hcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 352 RLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 352 ~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
.. ...+++ .++++++.||.|++.|
T Consensus 116 --~~---~~~~~~-----~~~~~~k~~~~ii~~~ 139 (139)
T PF13477_consen 116 --KK---KKLKKF-----IIKFAFKRADKIIVQS 139 (139)
T ss_pred --ch---HHHHHH-----HHHHHHHhCCEEEEcC
Confidence 00 001222 2556899999999875
|
|
| >TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG | Back alignment and domain information |
|---|
Probab=98.47 E-value=1.8e-05 Score=88.44 Aligned_cols=98 Identities=22% Similarity=0.302 Sum_probs=74.7
Q ss_pred CcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC
Q 001541 475 KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ 554 (1057)
Q Consensus 475 ~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~ 554 (1057)
+.+++++|..++.+....+++++..+. ...++.+|+|.+... ..++.+.+... +++.+.+++
T Consensus 171 ~~iLi~~GG~d~~~~~~~~l~~l~~~~---~~~~i~vv~G~~~~~----------~~~l~~~~~~~---~~i~~~~~~-- 232 (279)
T TIGR03590 171 RRVLVSFGGADPDNLTLKLLSALAESQ---INISITLVTGSSNPN----------LDELKKFAKEY---PNIILFIDV-- 232 (279)
T ss_pred CeEEEEeCCcCCcCHHHHHHHHHhccc---cCceEEEEECCCCcC----------HHHHHHHHHhC---CCEEEEeCH--
Confidence 468999999999876778888887752 344676788876421 34455555543 478888884
Q ss_pred CcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC
Q 001541 555 SDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN 599 (1057)
Q Consensus 555 ~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~ 599 (1057)
++++++|+.| |++|.+ .|.|+.|++++|+|+|+-..
T Consensus 233 ~~m~~lm~~a----Dl~Is~-----~G~T~~E~~a~g~P~i~i~~ 268 (279)
T TIGR03590 233 ENMAELMNEA----DLAIGA-----AGSTSWERCCLGLPSLAICL 268 (279)
T ss_pred HHHHHHHHHC----CEEEEC-----CchHHHHHHHcCCCEEEEEe
Confidence 6999999999 999875 47999999999999998765
|
This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases. |
| >smart00775 LNS2 LNS2 domain | Back alignment and domain information |
|---|
Probab=98.37 E-value=7.5e-07 Score=90.46 Aligned_cols=67 Identities=13% Similarity=0.181 Sum_probs=56.2
Q ss_pred EEEEEecCCCC--------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHH---HHHHh-----CCCCC
Q 001541 776 IFVISVDCDST--------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH---SFLVS-----GHLSP 833 (1057)
Q Consensus 776 Li~~DiDGTL~--------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~---~~l~~-----lgl~~ 833 (1057)
+|++||||||+ ..+++.+++++++++++ |+.|+++|||+...+. +++.. .+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~----G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp- 75 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNN----GYKILYLTARPIGQADRTRSYLSQIKQDGHNLP- 75 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHc----CCeEEEEcCCcHHHHHHHHHHHHHhhhccccCC-
Confidence 58999999993 36789999999999987 8999999999999884 88888 3352
Q ss_pred CCCCeEEeCCCcEEEe
Q 001541 834 SDFDAFICNSGSDLYY 849 (1057)
Q Consensus 834 ~~~D~lI~~nGa~I~~ 849 (1057)
..++||+||+.++.
T Consensus 76 --~g~li~~~g~~~~~ 89 (157)
T smart00775 76 --HGPVLLSPDRLFAA 89 (157)
T ss_pred --CceEEEcCCcchhh
Confidence 25799999998864
|
This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance. |
| >COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.6e-06 Score=90.84 Aligned_cols=52 Identities=23% Similarity=0.301 Sum_probs=45.5
Q ss_pred eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 950 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 950 ~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.+-.+-.+-+|..+|+.++..+|++++++++ .||+.| | ++||+.+|++||..
T Consensus 135 v~g~~~~~~~K~~~l~~~~~~~g~~~~~~~a-~gDs~n-D-lpml~~ag~~ia~n 186 (212)
T COG0560 135 VVGPICDGEGKAKALRELAAELGIPLEETVA-YGDSAN-D-LPMLEAAGLPIAVN 186 (212)
T ss_pred eeeeecCcchHHHHHHHHHHHcCCCHHHeEE-EcCchh-h-HHHHHhCCCCeEeC
Confidence 3444445568999999999999999999999 899999 8 99999999999996
|
|
| >COG4641 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=98.30 E-value=6.9e-05 Score=83.96 Aligned_cols=192 Identities=15% Similarity=0.104 Sum_probs=136.9
Q ss_pred cEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccc
Q 001541 424 RMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPL 503 (1057)
Q Consensus 424 rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~ 503 (1057)
++..+|.++|.+.|.|.+++. .-.--+.++|...|. +++...++.-.
T Consensus 162 ~~~~~~~a~d~~~~~~i~~da----------------------------~~~~dL~~ign~~pD-----r~e~~ke~~~~ 208 (373)
T COG4641 162 NCYYLPWAVDDSLFHPIPPDA----------------------------SYDVDLNLIGNPYPD-----RVEEIKEFFVE 208 (373)
T ss_pred ceeccCccCCchhcccCCccc----------------------------cceeeeEEecCCCcc-----HHHHHHHHhhc
Confidence 678899999999998765332 111247788877654 44444444311
Q ss_pred --cCCCc-EEE-EEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCC-CcHHHHHHHhhcCCcEEEEcCC--
Q 001541 504 --RELAN-LTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQ-SDVPEIYRLAAKTKGVFINPAF-- 576 (1057)
Q Consensus 504 --~~~~~-l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~-~dl~~ly~~Aa~~~dv~v~ps~-- 576 (1057)
.+.+. ..+ +.|.+- + .-+..-.+.+++.+.|+.+. ..++..++-- +++++-+.
T Consensus 209 ps~kl~v~rr~~~~g~~y-~---------------~~~~~~~~~~~~~yIg~~~~~~~v~~~~~~~----~~~~n~~r~~ 268 (373)
T COG4641 209 PSFKLMVDRRFYVLGPRY-P---------------DDIWGRTWEPNVQYIGYYNPKDGVPNAFKRD----DVTLNINRAS 268 (373)
T ss_pred cchhhhccceeeecCCcc-c---------------hhhhcccccchhhhhhccCccchhhhccccc----ceeeeecHHH
Confidence 11121 222 334431 0 01122235567888888877 7788888888 88887653
Q ss_pred -CCC---CCHHHHHHHHcCCcEEEcCCCCchhhhhcCCceEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcC
Q 001541 577 -IEP---FGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLF 651 (1057)
Q Consensus 577 -~Eg---fgl~~lEAmA~G~PVVat~~Gg~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~f 651 (1057)
.++ +++-+.|+++||.|.++....+..-.+.+|..-++.. |..++.+.+..++..+++++++.+.+.+.+ ..|
T Consensus 269 ~~~~l~~~~~RvFeiagc~~~liT~~~~~~e~~f~pgk~~iv~~--d~kdl~~~~~yll~h~~erkeiae~~ye~V~~~h 346 (373)
T COG4641 269 IANALFSPTNRVFEIAGCGGFLITDYWKDLEKFFKPGKDIIVYQ--DSKDLKEKLKYLLNHPDERKEIAECAYERVLARH 346 (373)
T ss_pred HHhhcCCchhhHHHHhhcCCccccccHHHHHHhcCCchheEEec--CHHHHHHHHHHHhcCcchHHHHHHhhHHHHHHhc
Confidence 222 3788999999999999999888888887776655554 999999999999999999999999999999 589
Q ss_pred CHHHHHHHHHHHHHcccCC
Q 001541 652 SWPEHCKTYLSRIAGCKPR 670 (1057)
Q Consensus 652 sw~~~a~~~l~~~~~~~~~ 670 (1057)
+.++-+.+++..+..+..+
T Consensus 347 t~~~r~~~~~~~i~sI~~r 365 (373)
T COG4641 347 TYEERIFKLLNEIASINIR 365 (373)
T ss_pred cHHHHHHHHHHHHHHHHHh
Confidence 9999999999888876554
|
|
| >PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=0.00054 Score=82.89 Aligned_cols=165 Identities=13% Similarity=0.105 Sum_probs=103.4
Q ss_pred HHHhhhCCCC-CcEEEEEeCCCC-----CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 465 EIMRFFTNPR-KPVILALARPDP-----KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 465 ~~~~~~~~~~-~~~Il~vGRl~~-----~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
++..|+.... .+++++.|.... .+-+..+++|++.+. ..+ ++..+++...
T Consensus 286 ~l~~fl~~~~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~-----~~v-iw~~~~~~~~------------------ 341 (507)
T PHA03392 286 YLEEFLNNSTNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLP-----YNV-LWKYDGEVEA------------------ 341 (507)
T ss_pred HHHHHHhcCCCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCC-----CeE-EEEECCCcCc------------------
Confidence 4445554433 467788888643 334577778887663 122 2222221100
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHH--HhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCce
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNG 612 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~--~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~G 612 (1057)
.++.++|.+.+++|+. +++. .+ ++||. -|-..++.||+.+|+|+|+-...+ ....+...+.|
T Consensus 342 -~~~p~Nv~i~~w~Pq~---~lL~hp~v----~~fIt----HGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~~G~G 409 (507)
T PHA03392 342 -INLPANVLTQKWFPQR---AVLKHKNV----KAFVT----QGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVELGIG 409 (507)
T ss_pred -ccCCCceEEecCCCHH---HHhcCCCC----CEEEe----cCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHHcCcE
Confidence 1345789999999886 4553 35 67773 345678999999999999987544 23334455678
Q ss_pred EEeCCC--CHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-hcCCHHHHHHHHHHHHH
Q 001541 613 LLVDPH--DQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 613 llv~p~--d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~~fsw~~~a~~~l~~~~ 665 (1057)
+.++.. +.+++.+||.+++++|..++.+.+-+.... +..+-.+-+-.+.+.+.
T Consensus 410 ~~l~~~~~t~~~l~~ai~~vl~~~~y~~~a~~ls~~~~~~p~~~~~~av~~iE~v~ 465 (507)
T PHA03392 410 RALDTVTVSAAQLVLAIVDVIENPKYRKNLKELRHLIRHQPMTPLHKAIWYTEHVI 465 (507)
T ss_pred EEeccCCcCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHH
Confidence 888654 578999999999999876666555555444 33444444445554443
|
|
| >COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.20 E-value=0.00038 Score=78.83 Aligned_cols=272 Identities=17% Similarity=0.178 Sum_probs=169.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+|..|.= .+..++++++...++|+.+---++-..... + .+. +-|+ ..-.-|+.-++
T Consensus 91 ~kPD~VlVhGDT~t~lA~alaa~~~~IpV~HvEAGlRt~~~~-------~-PEE------~NR~-----l~~~~S~~hfa 151 (383)
T COG0381 91 EKPDLVLVHGDTNTTLAGALAAFYLKIPVGHVEAGLRTGDLY-------F-PEE------INRR-----LTSHLSDLHFA 151 (383)
T ss_pred hCCCEEEEeCCcchHHHHHHHHHHhCCceEEEecccccCCCC-------C-cHH------HHHH-----HHHHhhhhhcC
Confidence 78999999874 455666788888899998876665221100 0 111 1122 23455777888
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCC-CCCCCCCCCCCCCCCCCCCCCc
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVP-QDGDMDGETEGNEDNPASPDPP 461 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p-~~~~~~~~~~~~~~~~~~~~~~ 461 (1057)
.|...++.+.+ .|.+..+|.|+-|.+ |.-.... ... ....
T Consensus 152 pte~ar~nLl~-----------------------EG~~~~~IfvtGnt~iDal~~~~~~~~---------------~~~~ 193 (383)
T COG0381 152 PTEIARKNLLR-----------------------EGVPEKRIFVTGNTVIDALLNTRDRVL---------------EDSK 193 (383)
T ss_pred ChHHHHHHHHH-----------------------cCCCccceEEeCChHHHHHHHHHhhhc---------------cchh
Confidence 88877666543 344445799998864 3221110 000 0000
Q ss_pred hHHHHHhhhCCCCCcEEEEEe-CCCCC-CCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHH-H
Q 001541 462 IWSEIMRFFTNPRKPVILALA-RPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLI-D 538 (1057)
Q Consensus 462 ~~~~~~~~~~~~~~~~Il~vG-Rl~~~-Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~-~ 538 (1057)
. ...++...++++|+..+ |-.-. +++..+++|+.++.++. +++.+|.-..+. ..++... .
T Consensus 194 ~---~~~~~~~~~~~~iLvT~HRreN~~~~~~~i~~al~~i~~~~--~~~~viyp~H~~------------~~v~e~~~~ 256 (383)
T COG0381 194 I---LAKGLDDKDKKYILVTAHRRENVGEPLEEICEALREIAEEY--PDVIVIYPVHPR------------PRVRELVLK 256 (383)
T ss_pred h---HHhhhccccCcEEEEEcchhhcccccHHHHHHHHHHHHHhC--CCceEEEeCCCC------------hhhhHHHHH
Confidence 1 11113345555665554 43332 89999999999998654 566666665543 2223333 5
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCCceEEeCC
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLVDP 617 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~p 617 (1057)
.++-..+|.+...+...+...++..| .++++- -|-..-||-..|+||+.-.. ..-+|-+.. +.-.+|.
T Consensus 257 ~L~~~~~v~li~pl~~~~f~~L~~~a-----~~iltD----SGgiqEEAp~lg~Pvl~lR~~TERPE~v~a-gt~~lvg- 325 (383)
T COG0381 257 RLKNVERVKLIDPLGYLDFHNLMKNA-----FLILTD----SGGIQEEAPSLGKPVLVLRDTTERPEGVEA-GTNILVG- 325 (383)
T ss_pred HhCCCCcEEEeCCcchHHHHHHHHhc-----eEEEec----CCchhhhHHhcCCcEEeeccCCCCccceec-CceEEeC-
Confidence 56666779999999999999999999 556552 25567899999999999663 334455543 3445665
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 618 HDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
.+.+.+.+++..++++++.+++|+... ..|.-...++++.+++.
T Consensus 326 ~~~~~i~~~~~~ll~~~~~~~~m~~~~----npYgdg~as~rIv~~l~ 369 (383)
T COG0381 326 TDEENILDAATELLEDEEFYERMSNAK----NPYGDGNASERIVEILL 369 (383)
T ss_pred ccHHHHHHHHHHHhhChHHHHHHhccc----CCCcCcchHHHHHHHHH
Confidence 488999999999999999887765432 34544445555555554
|
|
| >cd01427 HAD_like Haloacid dehalogenase-like hydrolases | Back alignment and domain information |
|---|
Probab=98.20 E-value=3e-06 Score=82.57 Aligned_cols=52 Identities=17% Similarity=0.215 Sum_probs=46.1
Q ss_pred EEEEEecCCCC--C---------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 776 IFVISVDCDST--T---------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 776 Li~~DiDGTL~--~---------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+++||+||||. . .+.+.+.+.|+.++++ |+.++|+|||+...+..+++.+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~ivS~~~~~~~~~~~~~~~~ 63 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEK----GIKLALATNKSRREVLELLEELGL 63 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHC----CCeEEEEeCchHHHHHHHHHHcCC
Confidence 48999999992 2 5678899999999986 899999999999999999999887
|
The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases. |
| >KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.18 E-value=9.7e-06 Score=90.58 Aligned_cols=103 Identities=22% Similarity=0.330 Sum_probs=73.0
Q ss_pred cHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhhhcC-CceEEe-C------CCCHHHH
Q 001541 556 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIHRVL-DNGLLV-D------PHDQQSV 623 (1057)
Q Consensus 556 dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~----eiv~~~-~~Gllv-~------p~d~~~l 623 (1057)
|..++.+.| .+.|+||.+||+|.+..|.-.+|+|-|+|+..|+. |.|++. .-|+.+ + ..+.+++
T Consensus 493 DYeeFVRGC----HLGVFPSYYEPWGYTPAECTVMGiPSvtTNlSGFGcfMeehi~d~~ayGIYIvDRRfks~deSv~qL 568 (692)
T KOG3742|consen 493 DYEEFVRGC----HLGVFPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHIEDPQAYGIYIVDRRFKSPDESVQQL 568 (692)
T ss_pred CHHHHhccc----cccccccccCCCCCCchheEEeccccccccccchhhhHHHHhcCchhceEEEEecccCChhhHHHHH
Confidence 788999999 99999999999999999999999999999987754 344332 236544 2 2345677
Q ss_pred HHHHHHHHhCHHHHHHHHHHHH-HHh-hcCCHHHHHHHHHHH
Q 001541 624 ADALLKLVADKQLWARCRQNGL-KNI-HLFSWPEHCKTYLSR 663 (1057)
Q Consensus 624 a~aI~~ll~d~~~~~~~~~~~~-~~v-~~fsw~~~a~~~l~~ 663 (1057)
++-|...... ..+|++-++.+ ++. ...+|..+..-|.+.
T Consensus 569 ~~~m~~F~~q-sRRQRIiqRNrtErLSdLLDWk~lG~~Y~~a 609 (692)
T KOG3742|consen 569 ASFMYEFCKQ-SRRQRIIQRNRTERLSDLLDWKYLGRYYRKA 609 (692)
T ss_pred HHHHHHHHHH-HHHHHHHHhcchhhHHHHHhHHHHhHHHHHH
Confidence 7777666543 33444433332 333 478999888877764
|
|
| >TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457 | Back alignment and domain information |
|---|
Probab=98.18 E-value=5.9e-06 Score=90.73 Aligned_cols=70 Identities=14% Similarity=0.242 Sum_probs=58.4
Q ss_pred eEEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECC---CCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEe
Q 001541 775 HIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTS---MTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 775 kLi~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTG---R~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~ 849 (1057)
|.|+||+||||. ..+.+.+.++|++++++ |+.|+++|| |+...+...++.+|++. .+|-+|+++|+.+.|
T Consensus 2 ~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~----g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~-~~~~iit~~~~~~~~ 76 (249)
T TIGR01457 2 KGYLIDLDGTMYKGKERIPEAETFVHELQKR----DIPYLFVTNNSTRTPESVAEMLASFDIPA-TLETVFTASMATADY 76 (249)
T ss_pred CEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEeeHHHHHHHH
Confidence 689999999992 33334789999999987 899999995 99999999999999974 457799998886654
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those. |
| >KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.12 E-value=4.1e-05 Score=77.45 Aligned_cols=195 Identities=14% Similarity=0.159 Sum_probs=110.8
Q ss_pred CcceEEEEEecCCCC---CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCC-CCCCeEEeCCCcEE
Q 001541 772 RRKHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP-SDFDAFICNSGSDL 847 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~---~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~-~~~D~lI~~nGa~I 847 (1057)
.++-|+.||+||||+ ..++++..+.|+.+++. +.+.++-|-.++-+.+-+ |-++ ..||+.-+.||-.-
T Consensus 9 ~~~~l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-----v~ig~VggsDl~k~~eql---G~~Vl~~fDY~F~ENGl~~ 80 (252)
T KOG3189|consen 9 DEETLCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-----VTIGFVGGSDLSKQQEQL---GDNVLEEFDYVFSENGLVA 80 (252)
T ss_pred CCceEEEEecCCccccccccCCHHHHHHHHHHhhh-----eEEEEeecHHHHHHHHHh---chhHHhhhcccccCCCeeE
Confidence 345689999999996 67889999999998874 677778887776555544 4322 46899999999988
Q ss_pred EeccCCCCCCCccccccchhhcccccchhhHHHHHH---H-hhhcccccccccccccccccccccCcceEEEEecCCC--
Q 001541 848 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLV---R-WASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPG-- 921 (1057)
Q Consensus 848 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~-- 921 (1057)
|..+ .....+....|+. .+.+++++. + +.......+. ..+++....+ ..++-.-++..
T Consensus 81 yk~g------k~~~~Qsi~~~LG----ee~~q~liNF~LrYlsdidlPiKR----GtFiEFRNgM--iNvsPIGR~cs~E 144 (252)
T KOG3189|consen 81 YKGG------KLLSKQSIINHLG----EEKLQELINFCLRYLSDIDLPIKR----GTFIEFRNGM--INVSPIGRNCSQE 144 (252)
T ss_pred eeCC------cchhHHHHHHHHh----HHHHHHHHHHHHHHHHhcCCcccc----cceEEecCCc--eeccccccccCHH
Confidence 8664 2222223233332 222333221 1 1211111110 1111111110 00000001110
Q ss_pred ---------CCc-cHHHHHHHHHHhcCcEEEEEeeCCe-eEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CC
Q 001541 922 ---------MTP-PVKELRKVLRIQALRCHVIYCQNGS-RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SG 986 (1057)
Q Consensus 922 ---------~~~-~~~el~~~l~~~~~~~~v~~s~~~~-~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD----~~ 986 (1057)
... .-+.+-+.|+.......+++|-++. .+||.|.|-.|---|++|-.. |++ .|-|||| ++
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d-gf~---~IhFFGDkT~~GG 220 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD-GFD---TIHFFGDKTMPGG 220 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc-CCc---eEEEeccccCCCC
Confidence 000 0112233344444455666776543 699999999999999999876 776 7788998 46
Q ss_pred CCCccccccC
Q 001541 987 DTDYEGLLGG 996 (1057)
Q Consensus 987 n~D~~eML~~ 996 (1057)
| | .|.+.-
T Consensus 221 N-D-yEIf~d 228 (252)
T KOG3189|consen 221 N-D-YEIFAD 228 (252)
T ss_pred C-c-ceeeeC
Confidence 7 8 677753
|
|
| >PLN02448 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=98.11 E-value=0.002 Score=77.28 Aligned_cols=140 Identities=9% Similarity=0.040 Sum_probs=81.6
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 474 RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 474 ~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
+..++++.|.... .+-+..++++++... ..+.+++ ..+. . .+.... .+++.+.++
T Consensus 274 ~~vvyvsfGs~~~~~~~~~~~~~~~l~~~~-----~~~lw~~-~~~~-~-----------~~~~~~-----~~~~~v~~w 330 (459)
T PLN02448 274 GSVLYVSLGSFLSVSSAQMDEIAAGLRDSG-----VRFLWVA-RGEA-S-----------RLKEIC-----GDMGLVVPW 330 (459)
T ss_pred CceEEEeecccccCCHHHHHHHHHHHHhCC-----CCEEEEE-cCch-h-----------hHhHhc-----cCCEEEecc
Confidence 3457788887632 233666777777652 2332333 2221 0 011111 135677789
Q ss_pred CCCCcHHHHHHHhhcCCcE--EEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhhhc-CCceEEeCC-------
Q 001541 552 HKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIHRV-LDNGLLVDP------- 617 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv--~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~----~eiv~~-~~~Gllv~p------- 617 (1057)
+|+.+ ++..+ .+ ||. -+--.+++||+++|+|+|+-...+- ...+.+ .+.|+-+..
T Consensus 331 ~pQ~~---iL~h~----~v~~fvt----HgG~nS~~eal~~GvP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~ 399 (459)
T PLN02448 331 CDQLK---VLCHS----SVGGFWT----HCGWNSTLEAVFAGVPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETL 399 (459)
T ss_pred CCHHH---HhccC----ccceEEe----cCchhHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEEecccccCCc
Confidence 88775 45455 44 542 2334688999999999999876542 223332 245766631
Q ss_pred CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001541 618 HDQQSVADALLKLVADK-QLWARCRQNGLKN 647 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1057)
-+.+++++++++++.++ ++.+++++++.+.
T Consensus 400 ~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~ 430 (459)
T PLN02448 400 VGREEIAELVKRFMDLESEEGKEMRRRAKEL 430 (459)
T ss_pred CcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 36799999999999864 4445555555543
|
|
| >PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5 | Back alignment and domain information |
|---|
Probab=98.06 E-value=6.6e-05 Score=86.43 Aligned_cols=272 Identities=14% Similarity=0.173 Sum_probs=140.2
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
.+||+|..+.= ...+.+++.+..+++|+++---++-.... ..|. ... ..|. .+-+-|+..++
T Consensus 66 ~~Pd~Vlv~GD~~~~la~alaA~~~~ipv~HieaGlRs~d~----~~g~-----~de---~~R~-----~i~~la~lhf~ 128 (346)
T PF02350_consen 66 EKPDAVLVLGDRNEALAAALAAFYLNIPVAHIEAGLRSGDR----TEGM-----PDE---INRH-----AIDKLAHLHFA 128 (346)
T ss_dssp HT-SEEEEETTSHHHHHHHHHHHHTT-EEEEES-----S-T----TSST-----THH---HHHH-----HHHHH-SEEEE
T ss_pred cCCCEEEEEcCCchHHHHHHHHHHhCCCEEEecCCCCcccc----CCCC-----chh---hhhh-----hhhhhhhhhcc
Confidence 57999999874 56677788888999996654444211100 0011 111 1222 24566899999
Q ss_pred cCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCC-CCCCCcCCCCCCCCCCCCCCCCCCCCCCCch
Q 001541 384 STRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIVPQDGDMDGETEGNEDNPASPDPPI 462 (1057)
Q Consensus 384 ~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnG-iD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~ 462 (1057)
+|+...+.+.+ .|....+|.++-+. +|.-...... ..+.
T Consensus 129 ~t~~~~~~L~~-----------------------~G~~~~rI~~vG~~~~D~l~~~~~~----------------~~~~- 168 (346)
T PF02350_consen 129 PTEEARERLLQ-----------------------EGEPPERIFVVGNPGIDALLQNKEE----------------IEEK- 168 (346)
T ss_dssp SSHHHHHHHHH-----------------------TT--GGGEEE---HHHHHHHHHHHT----------------TCC--
T ss_pred CCHHHHHHHHh-----------------------cCCCCCeEEEEChHHHHHHHHhHHH----------------Hhhh-
Confidence 99987776644 23344588888763 4432111000 0000
Q ss_pred HHHHHhhhCCCCCcEEEEEe-CCCC---CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTNPRKPVILALA-RPDP---KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vG-Rl~~---~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
.. ...+.....++++|..- |... ......+.+++..+.+. ....+++.+.+-| .....+.+.+.
T Consensus 169 ~~-~~~i~~~~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~vi~~~hn~p----------~~~~~i~~~l~ 236 (346)
T PF02350_consen 169 YK-NSGILQDAPKPYILVTLHPVTNEDNPERLEQILEALKALAER-QNVPVIFPLHNNP----------RGSDIIIEKLK 236 (346)
T ss_dssp HH-HHHHHHCTTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEEEEEE--S-H----------HHHHHHHHHHT
T ss_pred hh-hHHHHhccCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhc-CCCcEEEEecCCc----------hHHHHHHHHhc
Confidence 00 11121124556655554 3332 23466777777777653 2223333444322 23455555555
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHH-HHHHcCCcEEEcCC-CCchhhhhcCCceEEeC
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLI-EAAAHGLPIVATKN-GGPVDIHRVLDNGLLVD 616 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~l-EAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv~ 616 (1057)
++ +++.+..+++..++..+++.| +++|--| | .+. ||..+|+|+|.-.. |--++.+..+.+ .+|.
T Consensus 237 ~~---~~v~~~~~l~~~~~l~ll~~a----~~vvgdS-----s-GI~eEa~~lg~P~v~iR~~geRqe~r~~~~n-vlv~ 302 (346)
T PF02350_consen 237 KY---DNVRLIEPLGYEEYLSLLKNA----DLVVGDS-----S-GIQEEAPSLGKPVVNIRDSGERQEGRERGSN-VLVG 302 (346)
T ss_dssp T----TTEEEE----HHHHHHHHHHE----SEEEESS-----H-HHHHHGGGGT--EEECSSS-S-HHHHHTTSE-EEET
T ss_pred cc---CCEEEECCCCHHHHHHHHhcc----eEEEEcC-----c-cHHHHHHHhCCeEEEecCCCCCHHHHhhcce-EEeC
Confidence 55 389999999999999999999 7776333 5 666 99999999999864 444566555544 4475
Q ss_pred CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 001541 617 PHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 617 p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~ 664 (1057)
.|.+++.++|.+++.+++.+..+.. ...-|.=...++++.+++
T Consensus 303 -~~~~~I~~ai~~~l~~~~~~~~~~~----~~npYgdG~as~rI~~~L 345 (346)
T PF02350_consen 303 -TDPEAIIQAIEKALSDKDFYRKLKN----RPNPYGDGNASERIVEIL 345 (346)
T ss_dssp -SSHHHHHHHHHHHHH-HHHHHHHHC----S--TT-SS-HHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHhChHHHHhhcc----CCCCCCCCcHHHHHHHhh
Confidence 7999999999999998554443321 112444445555555554
|
1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C. |
| >COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.04 E-value=6.7e-06 Score=80.47 Aligned_cols=55 Identities=15% Similarity=0.136 Sum_probs=45.1
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANR 1018 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~ 1018 (1057)
+|-.+...|++++++.++++.. +||+-+ | +++|+.+|+++|+.+|. .+.+.++++
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ay-iGDD~~-D-lpvm~~vGls~a~~dAh--~~v~~~a~~ 137 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAY-VGDDLV-D-LPVMEKVGLSVAVADAH--PLLKQRADY 137 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhh-hcCccc-c-HHHHHHcCCcccccccC--HHHHHhhHh
Confidence 3777888999999999999966 777777 7 99999999999999999 444444444
|
|
| >PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length | Back alignment and domain information |
|---|
Probab=98.04 E-value=0.0015 Score=74.27 Aligned_cols=66 Identities=23% Similarity=0.238 Sum_probs=49.3
Q ss_pred cHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC---chhhhhcCCceEEeCCCCHHHHHHHHHHHHh
Q 001541 556 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG---PVDIHRVLDNGLLVDPHDQQSVADALLKLVA 632 (1057)
Q Consensus 556 dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg---~~eiv~~~~~Gllv~p~d~~~la~aI~~ll~ 632 (1057)
+...++..| |++| -+-|....||+..|+|.|++..|- .-+.+. +.|+++.-.|++++.+.+.+.+.
T Consensus 241 d~~~Ll~~a----~l~I-----g~ggTMa~EAA~LGtPaIs~~~g~~~~vd~~L~--~~Gll~~~~~~~ei~~~v~~~~~ 309 (335)
T PF04007_consen 241 DGLDLLYYA----DLVI-----GGGGTMAREAALLGTPAISCFPGKLLAVDKYLI--EKGLLYHSTDPDEIVEYVRKNLG 309 (335)
T ss_pred CHHHHHHhc----CEEE-----eCCcHHHHHHHHhCCCEEEecCCcchhHHHHHH--HCCCeEecCCHHHHHHHHHHhhh
Confidence 666888889 8988 344677899999999999987553 323333 35888888899999987766544
|
They are found in archaea and some bacteria and have no known function. |
| >TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase | Back alignment and domain information |
|---|
Probab=97.91 E-value=2.7e-05 Score=75.52 Aligned_cols=60 Identities=15% Similarity=0.176 Sum_probs=45.9
Q ss_pred eEEEEEecCCCCC---------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHH---------------HHHHHHHhCC
Q 001541 775 HIFVISVDCDSTT---------GLLDATKKICEAVEKERTEGSIGFILSTSMTIS---------------EIHSFLVSGH 830 (1057)
Q Consensus 775 kLi~~DiDGTL~~---------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~---------------~i~~~l~~lg 830 (1057)
|+|++|+||||.. .+.+.++++|++++++ |+.|+++|||+.. .+..||...+
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~----G~~IiiaTGR~~~~~~~n~~~i~~~~~~~t~~wL~k~~ 77 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKAL----GFEIVISSSRNMRTYEGNVGKINIHTLPIIILWLNQHN 77 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHC----CCEEEEECCCCchhhhccccccchhhHHHHHHHHHHcC
Confidence 6899999999931 1446778888888776 8999999999876 4467888888
Q ss_pred CCCCCCCeEEe
Q 001541 831 LSPSDFDAFIC 841 (1057)
Q Consensus 831 l~~~~~D~lI~ 841 (1057)
++ +|-++.
T Consensus 78 ip---Yd~l~~ 85 (126)
T TIGR01689 78 VP---YDEIYV 85 (126)
T ss_pred CC---CceEEe
Confidence 85 454443
|
Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology. |
| >PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A | Back alignment and domain information |
|---|
Probab=97.91 E-value=8e-05 Score=87.39 Aligned_cols=185 Identities=12% Similarity=0.074 Sum_probs=118.6
Q ss_pred HHHHHhhhCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCC
Q 001541 463 WSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDL 542 (1057)
Q Consensus 463 ~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l 542 (1057)
...+..++++.+..++++..++ .|=-+..++++.++.+. .|+-+|++...+.. -...+.+.+.+.|+
T Consensus 273 ~~~R~~~gLp~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~--vP~S~L~L~~~~~~---------~~~~l~~~~~~~Gv 339 (468)
T PF13844_consen 273 VTTRAQYGLPEDAVVFGSFNNL--FKISPETLDLWARILKA--VPNSRLWLLRFPAS---------GEARLRRRFAAHGV 339 (468)
T ss_dssp EEETGGGT--SSSEEEEE-S-G--GG--HHHHHHHHHHHHH--STTEEEEEEETSTT---------HHHHHHHHHHHTTS
T ss_pred ccCHHHcCCCCCceEEEecCcc--ccCCHHHHHHHHHHHHh--CCCcEEEEeeCCHH---------HHHHHHHHHHHcCC
Confidence 3445667777777777777776 57778899999998754 45555544333321 13567888888888
Q ss_pred C-CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch-----hhhhc-CCceEEe
Q 001541 543 Y-GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV-----DIHRV-LDNGLLV 615 (1057)
Q Consensus 543 ~-~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~-----eiv~~-~~~Gllv 615 (1057)
. +++.|.+..+.++....|+.+ ||++=|..+ +-+.+.+||+.+|+|||+-.-.... .++.. |-.-++.
T Consensus 340 ~~~Ri~f~~~~~~~ehl~~~~~~----DI~LDT~p~-nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~lGl~ElIA 414 (468)
T PF13844_consen 340 DPDRIIFSPVAPREEHLRRYQLA----DICLDTFPY-NGGTTTLDALWMGVPVVTLPGETMASRVGASILRALGLPELIA 414 (468)
T ss_dssp -GGGEEEEE---HHHHHHHGGG-----SEEE--SSS---SHHHHHHHHHT--EEB---SSGGGSHHHHHHHHHT-GGGB-
T ss_pred ChhhEEEcCCCCHHHHHHHhhhC----CEEeeCCCC-CCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHHcCCchhcC
Confidence 6 579999988888888888889 999987533 3478999999999999985422211 12221 2223344
Q ss_pred CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHcc
Q 001541 616 DPHDQQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGC 667 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~~l~~~~~~ 667 (1057)
. |.++..+.-.++..|++.++++++..++.. + -|+-..+++.+.+.|+.+
T Consensus 415 ~--s~~eYv~~Av~La~D~~~l~~lR~~Lr~~~~~SpLfd~~~~ar~lE~a~~~m 467 (468)
T PF13844_consen 415 D--SEEEYVEIAVRLATDPERLRALRAKLRDRRSKSPLFDPKRFARNLEAAYRQM 467 (468)
T ss_dssp S--SHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHSGGG-HHHHHHHHHHHHHHH
T ss_pred C--CHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHHHHHHh
Confidence 4 899999999999999999999999998876 3 699999999999999764
|
|
| >PLN02208 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.04 Score=65.58 Aligned_cols=94 Identities=14% Similarity=0.031 Sum_probs=61.7
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhh-hhcCCceEEeCC--
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDI-HRVLDNGLLVDP-- 617 (1057)
Q Consensus 545 ~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~ei-v~~~~~Gllv~p-- 617 (1057)
++...++.||.+ +++.. .+-++-+ -+--++++||+++|+|+|+-..-+ ...+ ++..+.|+.++.
T Consensus 312 g~~v~~W~PQ~~---iL~H~----~v~~Fvt--HcG~nS~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 382 (442)
T PLN02208 312 GVVWGGWVQQPL---ILDHP----SIGCFVN--HCGPGTIWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREK 382 (442)
T ss_pred CcEeeccCCHHH---HhcCC----ccCeEEc--cCCchHHHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEecccc
Confidence 466778988885 55555 3422222 233367899999999999976533 2222 233456777754
Q ss_pred ---CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001541 618 ---HDQQSVADALLKLVADK-QLWARCRQNGLKN 647 (1057)
Q Consensus 618 ---~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1057)
-+.++++++|.++++++ +..+++++++.+.
T Consensus 383 ~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~ 416 (442)
T PLN02208 383 TGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKL 416 (442)
T ss_pred CCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 36789999999999865 4556666666554
|
|
| >TIGR01684 viral_ppase viral phosphatase | Back alignment and domain information |
|---|
Probab=97.89 E-value=3.3e-05 Score=84.57 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=58.7
Q ss_pred CcceEEEEEecCCC-C--Ccc---hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCc
Q 001541 772 RRKHIFVISVDCDS-T--TGL---LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGS 845 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL-~--~~i---~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa 845 (1057)
-..++||||||||| + +.+ ++.+.++|++|+++ |+.++|+|+++...+...++.+|+. .-||.+ +++|.
T Consensus 124 ~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~Lkek----GikLaIaTS~~Re~v~~~L~~lGLd-~YFdvI-Is~Gd 197 (301)
T TIGR01684 124 EPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKR----GCILVLWSYGDRDHVVESMRKVKLD-RYFDII-ISGGH 197 (301)
T ss_pred ccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHcCCC-cccCEE-EECCc
Confidence 45689999999999 2 333 58999999999997 9999999999999999999999995 234544 55677
Q ss_pred EEEec
Q 001541 846 DLYYS 850 (1057)
Q Consensus 846 ~I~~~ 850 (1057)
.....
T Consensus 198 v~~~k 202 (301)
T TIGR01684 198 KAEEY 202 (301)
T ss_pred cccCC
Confidence 66543
|
These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade. |
| >PLN03007 UDP-glucosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.094 Score=63.39 Aligned_cols=146 Identities=14% Similarity=0.205 Sum_probs=80.5
Q ss_pred HHhhhCC--CCCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcC
Q 001541 466 IMRFFTN--PRKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD 541 (1057)
Q Consensus 466 ~~~~~~~--~~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~ 541 (1057)
...++.. ++..+++++|.... .+.+..++++++.+. ..+.++++......... ..+-+.+...+.
T Consensus 275 ~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~~~~~l~~~~-----~~flw~~~~~~~~~~~~---~~lp~~~~~r~~--- 343 (482)
T PLN03007 275 CLKWLDSKKPDSVIYLSFGSVASFKNEQLFEIAAGLEGSG-----QNFIWVVRKNENQGEKE---EWLPEGFEERTK--- 343 (482)
T ss_pred HHHHHhcCCCCceEEEeecCCcCCCHHHHHHHHHHHHHCC-----CCEEEEEecCCcccchh---hcCCHHHHHHhc---
Confidence 4444432 34467888887643 345666666666552 24545666421110000 000011111111
Q ss_pred CCCCEEeCCCCCCCcHHHHHHHhhcCCcE--EEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCch----hhh-hcCCceEE
Q 001541 542 LYGQVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIH-RVLDNGLL 614 (1057)
Q Consensus 542 l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv--~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~----eiv-~~~~~Gll 614 (1057)
..++...+++|+. +++..+ ++ ||. -+--++++||+++|+|+|+....+=. ..+ +....|+-
T Consensus 344 -~~g~~v~~w~PQ~---~iL~h~----~v~~fvt----H~G~nS~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~ 411 (482)
T PLN03007 344 -GKGLIIRGWAPQV---LILDHQ----ATGGFVT----HCGWNSLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVS 411 (482)
T ss_pred -cCCEEEecCCCHH---HHhccC----ccceeee----cCcchHHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeE
Confidence 2467888998886 566666 44 442 12245889999999999998754321 111 11133443
Q ss_pred eC----------CCCHHHHHHHHHHHHhCH
Q 001541 615 VD----------PHDQQSVADALLKLVADK 634 (1057)
Q Consensus 615 v~----------p~d~~~la~aI~~ll~d~ 634 (1057)
+. .-+.++++++|++++.++
T Consensus 412 ~~~~~~~~~~~~~~~~~~l~~av~~~m~~~ 441 (482)
T PLN03007 412 VGAKKLVKVKGDFISREKVEKAVREVIVGE 441 (482)
T ss_pred eccccccccccCcccHHHHHHHHHHHhcCc
Confidence 31 136889999999999875
|
|
| >COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.0021 Score=75.63 Aligned_cols=114 Identities=15% Similarity=0.082 Sum_probs=79.3
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCceEEeC
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVD 616 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~Gllv~ 616 (1057)
++..++...+++|+. +++..| |++|.. |-..++.||+.+|+|+|+-..+. ..+.++..+.|....
T Consensus 281 ~~p~n~~v~~~~p~~---~~l~~a----d~vI~h----GG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~~G~G~~l~ 349 (406)
T COG1819 281 NVPDNVIVADYVPQL---ELLPRA----DAVIHH----GGAGTTSEALYAGVPLVVIPDGADQPLNAERVEELGAGIALP 349 (406)
T ss_pred cCCCceEEecCCCHH---HHhhhc----CEEEec----CCcchHHHHHHcCCCEEEecCCcchhHHHHHHHHcCCceecC
Confidence 556788888888766 588899 999965 34467889999999999977654 334556667787776
Q ss_pred --CCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHH
Q 001541 617 --PHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 617 --p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~ 665 (1057)
+.+.+.++++|.++|+++..++...+........-.....++.+.+.+.
T Consensus 350 ~~~l~~~~l~~av~~vL~~~~~~~~~~~~~~~~~~~~g~~~~a~~le~~~~ 400 (406)
T COG1819 350 FEELTEERLRAAVNEVLADDSYRRAAERLAEEFKEEDGPAKAADLLEEFAR 400 (406)
T ss_pred cccCCHHHHHHHHHHHhcCHHHHHHHHHHHHHhhhcccHHHHHHHHHHHHh
Confidence 6899999999999999987555444433333344443334444433343
|
|
| >PRK10444 UMP phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00026 Score=77.59 Aligned_cols=63 Identities=6% Similarity=0.063 Sum_probs=49.2
Q ss_pred eEEEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHH---HHHHhCCCCCCCCCeEEeC
Q 001541 775 HIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH---SFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 775 kLi~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~---~~l~~lgl~~~~~D~lI~~ 842 (1057)
|+|+||+|||| ...+.+.+.++|++|+++ |+.|+++|+|+..... +.|..+|++. +.+-++++
T Consensus 2 ~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~----g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~-~~~~i~ts 69 (248)
T PRK10444 2 KNVICDIDGVLMHDNVAVPGAAEFLHRILDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV-PDSVFYTS 69 (248)
T ss_pred cEEEEeCCCceEeCCeeCccHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-CHhhEecH
Confidence 68999999999 356778999999999987 8999999999886554 4456678853 34556665
|
|
| >PLN02670 transferase, transferring glycosyl groups | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.087 Score=63.13 Aligned_cols=185 Identities=12% Similarity=0.105 Sum_probs=104.2
Q ss_pred HHHHHhhhCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 463 WSEIMRFFTNP--RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 463 ~~~~~~~~~~~--~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
|.+..+++-.. ...+.+++|.+. +.+-+..+..+++.+. . .+..++....... ......+-.....
T Consensus 265 ~~~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gl~~s~----~-~FlWv~r~~~~~~--~~~~~~lp~~f~~--- 334 (472)
T PLN02670 265 WVRIKEWLDKQRVNSVVYVALGTEASLRREEVTELALGLEKSE----T-PFFWVLRNEPGTT--QNALEMLPDGFEE--- 334 (472)
T ss_pred hHHHHHHHhcCCCCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCcccc--cchhhcCChHHHH---
Confidence 45566666443 456677788764 3455667777777663 1 3433444211100 0000000111111
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCceEE
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLL 614 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~Gll 614 (1057)
+..-. -+.+.+++||.+ +++..+ .+.||. -+--++++||+++|+|+|+....+ ....+...+.|+.
T Consensus 335 ~~~~r-G~vv~~W~PQ~~---IL~H~~--v~~Fvt----HcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~g~Gv~ 404 (472)
T PLN02670 335 RVKGR-GMIHVGWVPQVK---ILSHES--VGGFLT----HCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHGKKLGLE 404 (472)
T ss_pred hccCC-CeEEeCcCCHHH---HhcCcc--cceeee----cCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHHcCeeEE
Confidence 11111 266678988875 555541 023542 233468999999999999977543 2233444577887
Q ss_pred eCC------CCHHHHHHHHHHHHhCHHHHHHHHHHHHHHh----hcCCHHHHHHHHHHHHHccc
Q 001541 615 VDP------HDQQSVADALLKLVADKQLWARCRQNGLKNI----HLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 615 v~p------~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v----~~fsw~~~a~~~l~~~~~~~ 668 (1057)
++. -+.++++++|.+++.+++ -.++++++++.. ..=.-.+.++.+++.+.+..
T Consensus 405 l~~~~~~~~~~~e~i~~av~~vm~~~~-g~~~r~~a~~l~~~~~~~~~~~~~~~~~~~~l~~~~ 467 (472)
T PLN02670 405 VPRDERDGSFTSDSVAESVRLAMVDDA-GEEIRDKAKEMRNLFGDMDRNNRYVDELVHYLRENR 467 (472)
T ss_pred eeccccCCcCcHHHHHHHHHHHhcCcc-hHHHHHHHHHHHHHHhCcchhHHHHHHHHHHHHHhc
Confidence 753 358999999999998742 234455554443 35566777777777777654
|
|
| >PLN02562 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.038 Score=66.03 Aligned_cols=138 Identities=13% Similarity=0.123 Sum_probs=81.9
Q ss_pred CcEEEEEeCCC---CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 475 KPVILALARPD---PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 475 ~~~Il~vGRl~---~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
..++++.|... +.+-+..++.+++.+. . .+..++..+.. ..+.+ ... ++. .+++...++
T Consensus 274 svvyvsfGS~~~~~~~~~~~~l~~~l~~~g----~-~fiW~~~~~~~-~~l~~-------~~~---~~~--~~~~~v~~w 335 (448)
T PLN02562 274 SVIYISFGSWVSPIGESNVRTLALALEASG----R-PFIWVLNPVWR-EGLPP-------GYV---ERV--SKQGKVVSW 335 (448)
T ss_pred ceEEEEecccccCCCHHHHHHHHHHHHHCC----C-CEEEEEcCCch-hhCCH-------HHH---HHh--ccCEEEEec
Confidence 45778888853 4456777778877763 1 33334432110 01111 111 111 246777789
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhc-CCceEEeCCCCHHHHHHH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRV-LDNGLLVDPHDQQSVADA 626 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~-~~~Gllv~p~d~~~la~a 626 (1057)
+|+.+ ++...+ .++||. -+--.+++||+.+|+|+|+....+ ....+.+ .+.|+-+..-+.++++++
T Consensus 336 ~PQ~~---iL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~l~~~ 406 (448)
T PLN02562 336 APQLE---VLKHQA--VGCYLT----HCGWNSTMEAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRISGFGQKEVEEG 406 (448)
T ss_pred CCHHH---HhCCCc--cceEEe----cCcchhHHHHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeCCCCHHHHHHH
Confidence 88875 555540 034441 233468999999999999977544 2223322 356777755688999999
Q ss_pred HHHHHhCHHHHHH
Q 001541 627 LLKLVADKQLWAR 639 (1057)
Q Consensus 627 I~~ll~d~~~~~~ 639 (1057)
|++++.+++.+++
T Consensus 407 v~~~l~~~~~r~~ 419 (448)
T PLN02562 407 LRKVMEDSGMGER 419 (448)
T ss_pred HHHHhCCHHHHHH
Confidence 9999988654433
|
|
| >TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.00038 Score=73.42 Aligned_cols=45 Identities=20% Similarity=0.259 Sum_probs=41.2
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGI 1006 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa 1006 (1057)
+|+.+++.+++++|++++++++ +||+.+ | ++|++.+|.++|+...
T Consensus 147 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-~~~a~~ag~~~a~~~~ 191 (201)
T TIGR01491 147 NKGEAVERLKRELNPSLTETVA-VGDSKN-D-LPMFEVADISISLGDE 191 (201)
T ss_pred cHHHHHHHHHHHhCCCHHHEEE-EcCCHh-H-HHHHHhcCCeEEECCC
Confidence 6999999999999999999988 889988 8 9999999999999643
|
This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog. |
| >COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.002 Score=75.67 Aligned_cols=178 Identities=14% Similarity=0.125 Sum_probs=124.2
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEE-EEEecCCCCcccchhhHHHHHHHHHHHHHcCCC-CCEE
Q 001541 470 FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY-GQVA 547 (1057)
Q Consensus 470 ~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~-LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~-~~V~ 547 (1057)
+++++..++++.++ +.|-.+.+++-+-++.. .-|+-+ ++.|++++ .++...++.++++.|+. .+..
T Consensus 425 glp~~avVf~c~~n--~~K~~pev~~~wmqIL~--~vP~Svl~L~~~~~~--------~~~~~~l~~la~~~Gv~~eRL~ 492 (620)
T COG3914 425 GLPEDAVVFCCFNN--YFKITPEVFALWMQILS--AVPNSVLLLKAGGDD--------AEINARLRDLAEREGVDSERLR 492 (620)
T ss_pred CCCCCeEEEEecCC--cccCCHHHHHHHHHHHH--hCCCcEEEEecCCCc--------HHHHHHHHHHHHHcCCChhhee
Confidence 34455555555554 46777777777777753 345444 45566654 56789999999999885 5799
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-------CCCCchhhhhc-CCceEEeCCCC
Q 001541 548 YPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-------KNGGPVDIHRV-LDNGLLVDPHD 619 (1057)
Q Consensus 548 f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-------~~Gg~~eiv~~-~~~Gllv~p~d 619 (1057)
|.+..+.++-.+.|..| |+++=|--+ |-..|.+||+.+|+|||+- .+|+. ++.+ |-.-++++ +
T Consensus 493 f~p~~~~~~h~a~~~iA----DlvLDTyPY-~g~TTa~daLwm~vPVlT~~G~~FasR~~~s--i~~~agi~e~vA~--s 563 (620)
T COG3914 493 FLPPAPNEDHRARYGIA----DLVLDTYPY-GGHTTASDALWMGVPVLTRVGEQFASRNGAS--IATNAGIPELVAD--S 563 (620)
T ss_pred ecCCCCCHHHHHhhchh----heeeecccC-CCccchHHHHHhcCceeeeccHHHHHhhhHH--HHHhcCCchhhcC--C
Confidence 99999999999999999 998866422 3457899999999999972 34432 2322 22223443 5
Q ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHccc
Q 001541 620 QQSVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 620 ~~~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~~l~~~~~~~ 668 (1057)
.++..+.-..+-.|..++++.+..-.+.. . -|+.+..++++..+|..+-
T Consensus 564 ~~dYV~~av~~g~dral~q~~r~~l~~~r~tspL~d~~~far~le~~y~~M~ 615 (620)
T COG3914 564 RADYVEKAVAFGSDRALRQQVRAELKRSRQTSPLFDPKAFARKLETLYWGMW 615 (620)
T ss_pred HHHHHHHHHHhcccHHHHHhhHHHHHhccccCcccCHHHHHHHHHHHHHHHH
Confidence 55555555555567777877777666665 2 6999999999999998764
|
|
| >PHA03398 viral phosphatase superfamily protein; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00015 Score=79.53 Aligned_cols=74 Identities=15% Similarity=0.153 Sum_probs=59.2
Q ss_pred cCcceEEEEEecCCCC---Ccc---hHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCC
Q 001541 771 RRRKHIFVISVDCDST---TGL---LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSG 844 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~---~~i---~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nG 844 (1057)
....|+|+|||||||. ..+ ++.+.++|++|+++ |+.++|+|+.+...+...++.+|+. .-||.+|| +|
T Consensus 125 ~~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkek----GikLaIvTNg~Re~v~~~Le~lgL~-~yFDvII~-~g 198 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKER----GCVLVLWSYGNREHVVHSLKETKLE-GYFDIIIC-GG 198 (303)
T ss_pred eeeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHC----CCEEEEEcCCChHHHHHHHHHcCCC-ccccEEEE-CC
Confidence 5667999999999993 445 68899999999997 9999999988888889999999995 23455544 66
Q ss_pred cEEEec
Q 001541 845 SDLYYS 850 (1057)
Q Consensus 845 a~I~~~ 850 (1057)
......
T Consensus 199 ~i~~k~ 204 (303)
T PHA03398 199 RKAGEY 204 (303)
T ss_pred Cccccc
Confidence 666544
|
|
| >PRK10017 colanic acid biosynthesis protein; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.18 Score=59.66 Aligned_cols=91 Identities=10% Similarity=0.092 Sum_probs=57.8
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCC-ceEEeC--CCCHHHHH
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLD-NGLLVD--PHDQQSVA 624 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~-~Gllv~--p~d~~~la 624 (1057)
....+..++..+++.| |++|-.-++ .++=|++.|+|+|+-.. .-...+++..+ ..++++ .-+.+++.
T Consensus 313 ~~~~~~~e~~~iIs~~----dl~ig~RlH-----a~I~a~~~gvP~i~i~Y~~K~~~~~~~lg~~~~~~~~~~l~~~~Li 383 (426)
T PRK10017 313 MDELNDLEMGKILGAC----ELTVGTRLH-----SAIISMNFGTPAIAINYEHKSAGIMQQLGLPEMAIDIRHLLDGSLQ 383 (426)
T ss_pred cCCCChHHHHHHHhhC----CEEEEecch-----HHHHHHHcCCCEEEeeehHHHHHHHHHcCCccEEechhhCCHHHHH
Confidence 3444456888999999 998855332 46788999999999653 11222332221 223343 34578899
Q ss_pred HHHHHHHhCHHHHHHHHHHHHHHh
Q 001541 625 DALLKLVADKQLWARCRQNGLKNI 648 (1057)
Q Consensus 625 ~aI~~ll~d~~~~~~~~~~~~~~v 648 (1057)
+.+.+++++.+..++.-+......
T Consensus 384 ~~v~~~~~~r~~~~~~l~~~v~~~ 407 (426)
T PRK10017 384 AMVADTLGQLPALNARLAEAVSRE 407 (426)
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999998876655444443333
|
|
| >PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.21 Score=59.66 Aligned_cols=93 Identities=17% Similarity=0.233 Sum_probs=58.2
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcC-CceEEe-CC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVL-DNGLLV-DP 617 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~-~~Gllv-~p 617 (1057)
++....+++|+.+ ++...+ .+.||.- +--++++||+++|+|+|+....+ ....+.+. +.|+.+ ..
T Consensus 324 ~~g~v~~w~PQ~~---iL~h~~--v~~fvtH----~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~ 394 (451)
T PLN02410 324 GRGYIVKWAPQKE---VLSHPA--VGGFWSH----CGWNSTLESIGEGVPMICKPFSSDQKVNARYLECVWKIGIQVEGD 394 (451)
T ss_pred CCeEEEccCCHHH---HhCCCc--cCeeeec----CchhHHHHHHHcCCCEEeccccccCHHHHHHHHHHhCeeEEeCCc
Confidence 4556668988885 555531 0446632 22357899999999999976543 22222222 567666 33
Q ss_pred CCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001541 618 HDQQSVADALLKLVADKQLWARCRQNGLK 646 (1057)
Q Consensus 618 ~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 646 (1057)
-+.++++++|++++.+++ .+++++++++
T Consensus 395 ~~~~~v~~av~~lm~~~~-~~~~r~~a~~ 422 (451)
T PLN02410 395 LDRGAVERAVKRLMVEEE-GEEMRKRAIS 422 (451)
T ss_pred ccHHHHHHHHHHHHcCCc-HHHHHHHHHH
Confidence 478999999999998754 3344444443
|
|
| >PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.4 Score=57.78 Aligned_cols=147 Identities=13% Similarity=0.151 Sum_probs=80.0
Q ss_pred HHHhhhCCC--CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 465 EIMRFFTNP--RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 465 ~~~~~~~~~--~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
+...++... ...+.++.|.+.. .+-+..++++++... ..+.++++........ ...+...+.+.+.
T Consensus 272 ~~~~WLd~~~~~svVyvsfGS~~~~~~~~~~ela~gL~~~~-----~~flw~~~~~~~~~~~---~~~lp~~~~~r~~-- 341 (477)
T PLN02863 272 DVMTWLDTCEDHKVVYVCFGSQVVLTKEQMEALASGLEKSG-----VHFIWCVKEPVNEESD---YSNIPSGFEDRVA-- 341 (477)
T ss_pred HHHHHHhcCCCCceEEEEeeceecCCHHHHHHHHHHHHhCC-----CcEEEEECCCcccccc---hhhCCHHHHHHhc--
Confidence 344555332 3456778887642 233666777776552 2444566532211000 0001111211111
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhh-hhcCCceEEe
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDI-HRVLDNGLLV 615 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~ei-v~~~~~Gllv 615 (1057)
...+...+++|+. +++...+ .++||. -+--.+++||+++|+|+|+-...+ .... ++..+.|+.+
T Consensus 342 --~~g~~v~~w~PQ~---~vL~h~~--v~~fvt----H~G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~ 410 (477)
T PLN02863 342 --GRGLVIRGWAPQV---AILSHRA--VGAFLT----HCGWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRV 410 (477)
T ss_pred --cCCEEecCCCCHH---HHhcCCC--cCeEEe----cCCchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEe
Confidence 2357778998875 4565530 156662 233458899999999999976433 2222 3334667766
Q ss_pred CC-----CCHHHHHHHHHHHHh
Q 001541 616 DP-----HDQQSVADALLKLVA 632 (1057)
Q Consensus 616 ~p-----~d~~~la~aI~~ll~ 632 (1057)
.. -+.++++++|.+++.
T Consensus 411 ~~~~~~~~~~~~v~~~v~~~m~ 432 (477)
T PLN02863 411 CEGADTVPDSDELARVFMESVS 432 (477)
T ss_pred ccCCCCCcCHHHHHHHHHHHhh
Confidence 21 267899999999884
|
|
| >PF11997 DUF3492: Domain of unknown function (DUF3492); InterPro: IPR022622 This domain is functionally uncharacterised and is found in bacteria, archaea and eukaryotes | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.0045 Score=68.54 Aligned_cols=86 Identities=17% Similarity=0.130 Sum_probs=58.7
Q ss_pred cceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCch-hhHHHHHHhhhc--chHHHHHHHHHHHHHHHHHHHhhcCCEE
Q 001541 306 WPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGR-DKLEQLLKQARL--SRDEINATYKIMRRIEAEELSLDASEIV 381 (1057)
Q Consensus 306 ~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~-~~~~~l~~~g~~--~~~~~~~~yk~~~ri~~E~~~l~~ad~V 381 (1057)
+.||+|+... .+|.+|+.++...|+|+++|-|++.. +....+...... ....-..+.++++.+ -+.+++.||.|
T Consensus 172 ~advyHsvstGyAgl~g~~~k~~~g~P~lLTEHGIY~RER~~ei~~a~w~~~~~~~r~~wi~~f~~l--~~~~Y~~Ad~I 249 (268)
T PF11997_consen 172 KADVYHSVSTGYAGLLGALAKYRYGRPFLLTEHGIYTREREIEILQADWIWESPYVRDLWIRFFESL--SRLAYRAADRI 249 (268)
T ss_pred CCCEEecCCccHHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccccchHHHHHHHHHHHHHH--HHHHHHhhCee
Confidence 5799999875 78999999999999999999999865 333444444333 111111222333333 35689999999
Q ss_pred EecCHHHHHHHH
Q 001541 382 ITSTRQEIEEQW 393 (1057)
Q Consensus 382 i~~S~~~~~~~~ 393 (1057)
++.++.....|.
T Consensus 250 ~~l~~~n~~~q~ 261 (268)
T PF11997_consen 250 TPLYEYNREWQI 261 (268)
T ss_pred cccchhhHHHHH
Confidence 999887555543
|
It is typically between 259 to 282 amino acids in length. This region is found N-terminal PF00534 from PFAM. There are two conserved sequence motifs: GGVS and EHGIY. |
| >TIGR00338 serB phosphoserine phosphatase SerB | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00063 Score=73.02 Aligned_cols=43 Identities=16% Similarity=0.310 Sum_probs=39.7
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.|...++.+++++|++++++++ +||+.+ | ++|++.+|.+|+|+
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-i~aa~~ag~~i~~~ 194 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPENTVA-VGDGAN-D-LSMIKAAGLGIAFN 194 (219)
T ss_pred ccHHHHHHHHHHcCCCHHHEEE-EECCHH-H-HHHHHhCCCeEEeC
Confidence 4899999999999999999998 888887 8 99999999999995
|
Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins. |
| >PLN02992 coniferyl-alcohol glucosyltransferase | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.38 Score=57.85 Aligned_cols=81 Identities=16% Similarity=0.184 Sum_probs=55.0
Q ss_pred CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEeCC--
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP-- 617 (1057)
Q Consensus 545 ~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p-- 617 (1057)
.+.+.+++|+.+ ++...+ .+.||. -+--++++||+.+|+|+|+-...+ ....+ +..+.|+.++.
T Consensus 339 g~vv~~W~PQ~~---iL~h~~--vg~Fit----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~ 409 (481)
T PLN02992 339 GFVVPSWAPQAE---ILAHQA--VGGFLT----HCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDPK 409 (481)
T ss_pred CEEEeecCCHHH---HhCCcc--cCeeEe----cCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCCC
Confidence 477789988875 455551 023442 233468899999999999987544 22233 34566777743
Q ss_pred --CCHHHHHHHHHHHHhCH
Q 001541 618 --HDQQSVADALLKLVADK 634 (1057)
Q Consensus 618 --~d~~~la~aI~~ll~d~ 634 (1057)
-+.++++++|.+++.++
T Consensus 410 ~~~~~~~l~~av~~vm~~~ 428 (481)
T PLN02992 410 EVISRSKIEALVRKVMVEE 428 (481)
T ss_pred CcccHHHHHHHHHHHhcCC
Confidence 47799999999999763
|
|
| >COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.014 Score=63.28 Aligned_cols=139 Identities=23% Similarity=0.366 Sum_probs=85.1
Q ss_pred CCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCC
Q 001541 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 552 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v 552 (1057)
+-+-+++++|.-|+ ||+. ++.+..+.+ ...++.+|+|...+. +..+.+.+.. ++++.++-.
T Consensus 157 ~~r~ilI~lGGsDp-k~lt--~kvl~~L~~--~~~nl~iV~gs~~p~----------l~~l~k~~~~---~~~i~~~~~- 217 (318)
T COG3980 157 PKRDILITLGGSDP-KNLT--LKVLAELEQ--KNVNLHIVVGSSNPT----------LKNLRKRAEK---YPNINLYID- 217 (318)
T ss_pred chheEEEEccCCCh-hhhH--HHHHHHhhc--cCeeEEEEecCCCcc----------hhHHHHHHhh---CCCeeeEec-
Confidence 34558889998776 4443 344444432 225788899965431 3444555444 456666555
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCc--EE--EcCCCCchhhhhcCCceEEeCC---CCHHHHHH
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP--IV--ATKNGGPVDIHRVLDNGLLVDP---HDQQSVAD 625 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~P--VV--at~~Gg~~eiv~~~~~Gllv~p---~d~~~la~ 625 (1057)
.+++++++..| |.+|..+ |.++.||+..|+| +| +.+--......+. -|+..+- ........
T Consensus 218 -~~dma~LMke~----d~aI~Aa-----GstlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~--lg~~~~l~~~l~~~~~~~ 285 (318)
T COG3980 218 -TNDMAELMKEA----DLAISAA-----GSTLYEALLLGVPSLVLPLAENQIATAKEFEA--LGIIKQLGYHLKDLAKDY 285 (318)
T ss_pred -chhHHHHHHhc----chheecc-----chHHHHHHHhcCCceEEeeeccHHHHHHHHHh--cCchhhccCCCchHHHHH
Confidence 57899999999 8988664 8999999999999 33 2332221222211 1222221 24566677
Q ss_pred HHHHHHhCHHHHHHHHH
Q 001541 626 ALLKLVADKQLWARCRQ 642 (1057)
Q Consensus 626 aI~~ll~d~~~~~~~~~ 642 (1057)
-+.++.+|+..+..+..
T Consensus 286 ~~~~i~~d~~~rk~l~~ 302 (318)
T COG3980 286 EILQIQKDYARRKNLSF 302 (318)
T ss_pred HHHHhhhCHHHhhhhhh
Confidence 77778888876655444
|
|
| >PLN00164 glucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.6 Score=56.39 Aligned_cols=93 Identities=15% Similarity=0.175 Sum_probs=58.4
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chh-hhhcCCceEEeCC---
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVD-IHRVLDNGLLVDP--- 617 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~e-iv~~~~~Gllv~p--- 617 (1057)
+...+++|+.+ ++...+ .+.||. +-| -.+++||+++|+|+|+-..-+ ... +++..+.|+.++.
T Consensus 341 ~~v~~w~PQ~~---iL~h~~--vg~fvt---H~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~ 411 (480)
T PLN00164 341 LVWPTWAPQKE---ILAHAA--VGGFVT---HCG-WNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRK 411 (480)
T ss_pred eEEeecCCHHH---HhcCcc--cCeEEe---ecc-cchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccc
Confidence 55668887774 555551 024442 123 357899999999999976433 222 2344467777642
Q ss_pred ----CCHHHHHHHHHHHHhCHH-HHHHHHHHHHHH
Q 001541 618 ----HDQQSVADALLKLVADKQ-LWARCRQNGLKN 647 (1057)
Q Consensus 618 ----~d~~~la~aI~~ll~d~~-~~~~~~~~~~~~ 647 (1057)
-+.++++++|.+++.+++ +.+++++++.+.
T Consensus 412 ~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~~~ 446 (480)
T PLN00164 412 RDNFVEAAELERAVRSLMGGGEEEGRKAREKAAEM 446 (480)
T ss_pred cCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHH
Confidence 257999999999998653 345555555443
|
|
| >PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5 | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.00045 Score=72.46 Aligned_cols=181 Identities=15% Similarity=0.163 Sum_probs=93.3
Q ss_pred HHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHH-hCCCCCCCCCeEEeCCCcEEEeccCCCCCCCccccccchhhcccc
Q 001541 794 KKICEAVEKERTEGSIGFILSTSMTISEIHSFLV-SGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYR 872 (1057)
Q Consensus 794 ~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~-~lgl~~~~~D~lI~~nGa~I~~~~~~~~~~~~~~d~~~~~~i~~~ 872 (1057)
++.|++|++ .+.|+++||-.+.-+.+-+. ..-+ ..+|++-+.||...|..+ .. .|...+...
T Consensus 2 ~~~L~~L~~-----~~~vgvVgGsd~~k~~eQl~~~~~~--~~fdy~f~enG~~~y~~~------~~----~~~~~~~~~ 64 (220)
T PF03332_consen 2 AELLQKLRK-----KVPVGVVGGSDLPKIQEQLGGDDVL--DNFDYVFPENGLVAYKNG------EL----IWSQSIAEF 64 (220)
T ss_dssp HHHHHHHHT-----TSEEEEEESS-HHHHHHHHSTTTHH--HH-SEEEEGGGTEEEETT------EE----EEE--HHHH
T ss_pred HHHHHHHHh-----cCeEEEEcchhHHHHHHHHcccchH--hhCCeeecCCCCeEEECC------Cc----hhhHhHHHH
Confidence 467888886 58999999999988777663 2112 347899999999999764 11 222222222
Q ss_pred cchhhHHHHHH----HhhhcccccccccccccccccccccCcceEEEEe--cCCCCC--------cc----HHHHHHHHH
Q 001541 873 WGGEGLRKTLV----RWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSV--QKPGMT--------PP----VKELRKVLR 934 (1057)
Q Consensus 873 w~~e~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~--~~~~~~--------~~----~~el~~~l~ 934 (1057)
...+.+.+++. .........+. ..++|....+ +.+.- ++.... .+ -+.+.+.|+
T Consensus 65 lgee~~~~~in~~l~~~~~l~lp~kr----GtfIE~R~gm----In~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~ 136 (220)
T PF03332_consen 65 LGEEKLQKLINFCLRYISDLDLPVKR----GTFIEFRGGM----INFSPIGRNASQEERDEFDEYDKKHKIREKLVEALK 136 (220)
T ss_dssp HHHHHHHHHHHHHHHHHHT---S-------S-SEEEESSE----EEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHhCCCCccC----CCceeecCCc----EEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHH
Confidence 22233333332 11111111110 1122222111 22211 111100 00 123444555
Q ss_pred HhcCcEEEEEe-eCCeeEEEecCCCCHHHHHHHHHHHhCCCcccEEEEecC----CCCCCccccccCcc-eEEEeCC
Q 001541 935 IQALRCHVIYC-QNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE----SGDTDYEGLLGGVH-KTVILKG 1005 (1057)
Q Consensus 935 ~~~~~~~v~~s-~~~~~lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD----~~n~D~~eML~~ag-~gVAMgN 1005 (1057)
.....+.+.++ .+.+.+||.|+|.+|..+|++|.+.. .+ -|.|||| ++| | .+.+...+ .|+.+.|
T Consensus 137 ~~f~d~~L~~siGGqiSiDvfp~GwDKty~Lr~l~~~~---~~-~I~FfGDkt~pGGN-D-yei~~~~rt~g~~V~~ 207 (220)
T PF03332_consen 137 KEFPDFGLTFSIGGQISIDVFPKGWDKTYCLRHLEDEG---FD-EIHFFGDKTFPGGN-D-YEIFEDPRTIGHTVTS 207 (220)
T ss_dssp HHTCCCSEEEEEETTTEEEEEETT-SGGGGGGGTTTTT----S-EEEEEESS-STTST-T-HHHHHSTTSEEEE-SS
T ss_pred HHCCCCceEEecCCceEEccccCCccHHHHHHHHHhcc---cc-eEEEEehhccCCCC-C-ceeeecCCccEEEeCC
Confidence 55555444333 44458999999999999999997743 33 5566887 478 8 77776543 4666653
|
4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A. |
| >TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00083 Score=69.31 Aligned_cols=42 Identities=26% Similarity=0.314 Sum_probs=36.9
Q ss_pred EecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCc
Q 001541 953 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGV 997 (1057)
Q Consensus 953 I~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~a 997 (1057)
..+.+.+|+.+++.+++.+|++.+++++ +||+.+ | ++|++.|
T Consensus 136 ~~~~~~~K~~~l~~~~~~~~~~~~~~~~-iGDs~~-D-~~~~~~a 177 (177)
T TIGR01488 136 VNPEGECKGKVLKELLEESKITLKKIIA-VGDSVN-D-LPMLKLA 177 (177)
T ss_pred ccCCcchHHHHHHHHHHHhCCCHHHEEE-EeCCHH-H-HHHHhcC
Confidence 3467889999999999999999999988 888888 8 9998764
|
Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences. |
| >PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=97.29 E-value=0.038 Score=63.97 Aligned_cols=145 Identities=17% Similarity=0.228 Sum_probs=89.5
Q ss_pred CCCCCcEEE-EEe-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE
Q 001541 471 TNPRKPVIL-ALA-RPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547 (1057)
Q Consensus 471 ~~~~~~~Il-~vG-Rl~~-~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~ 547 (1057)
.++++++|. ..| |-.. ++.++.++++++++.+ ..+++.+++...+. .....+.......+..-.+.
T Consensus 180 l~~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~--~~p~l~fvvp~a~~---------~~~~~i~~~~~~~~~~~~~~ 248 (373)
T PF02684_consen 180 LDPDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKK--QRPDLQFVVPVAPE---------VHEELIEEILAEYPPDVSIV 248 (373)
T ss_pred CCCCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHH--hCCCeEEEEecCCH---------HHHHHHHHHHHhhCCCCeEE
Confidence 566777654 444 4433 4567899999999975 44667766654432 11222444444444322333
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-CCCCchh----------------hhhcCC
Q 001541 548 YPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVD----------------IHRVLD 610 (1057)
Q Consensus 548 f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-~~Gg~~e----------------iv~~~~ 610 (1057)
.. ..+-.+.++.| |+.+..| |.+.+|++.+|+|+|.. +.+.+.- ++.+..
T Consensus 249 ~~----~~~~~~~m~~a----d~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk~~~isL~Niia~~~ 315 (373)
T PF02684_consen 249 II----EGESYDAMAAA----DAALAAS-----GTATLEAALLGVPMVVAYKVSPLTYFIAKRLVKVKYISLPNIIAGRE 315 (373)
T ss_pred Ec----CCchHHHHHhC----cchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHHHHHHHhhcCCEeechhhhcCCC
Confidence 22 34778899999 9999887 99999999999998774 3332222 111100
Q ss_pred --ceEEeCCCCHHHHHHHHHHHHhCHHHHHH
Q 001541 611 --NGLLVDPHDQQSVADALLKLVADKQLWAR 639 (1057)
Q Consensus 611 --~Gllv~p~d~~~la~aI~~ll~d~~~~~~ 639 (1057)
.-++=+.-+++.+++++..++.|++.++.
T Consensus 316 v~PEliQ~~~~~~~i~~~~~~ll~~~~~~~~ 346 (373)
T PF02684_consen 316 VVPELIQEDATPENIAAELLELLENPEKRKK 346 (373)
T ss_pred cchhhhcccCCHHHHHHHHHHHhcCHHHHHH
Confidence 00122344789999999999999876443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process |
| >COG4671 Predicted glycosyl transferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.15 Score=57.21 Aligned_cols=336 Identities=17% Similarity=0.172 Sum_probs=166.6
Q ss_pred cceEEEEEecccccccCCcCCCCCCCCCcHHHHHHHHHHHHhcC--CCeeeEEEEecCCCCCCCCCccCCcccccCCCCC
Q 001541 164 KKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSM--PGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNS 241 (1057)
Q Consensus 164 ~~m~I~~is~h~~~~~~~~~~gr~~d~GG~~~~v~~LA~aLa~~--Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~ 241 (1057)
+.+||+|-|.|-+ | =|.-+....+|++|.+. | .+|.++|....-+..+
T Consensus 8 ~~~Ri~~Yshd~~--------G-----lGHlrR~~~Ia~aLv~d~~~--~~Il~IsG~~~~~~F~--------------- 57 (400)
T COG4671 8 KRPRILFYSHDLL--------G-----LGHLRRALRIAHALVEDYLG--FDILIISGGPPAGGFP--------------- 57 (400)
T ss_pred ccceEEEEehhhc--------c-----chHHHHHHHHHHHHhhcccC--ceEEEEeCCCccCCCC---------------
Confidence 3569999996554 2 27888899999999998 8 9999998865222221
Q ss_pred CccccccCCCCCeEEEEccCCCcc---cccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCch
Q 001541 242 DDFMDDMGESSGAYIIRIPFGPKD---KYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG 318 (1057)
Q Consensus 242 ~~~~~~~~~~~gv~i~rip~~p~~---~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~ 318 (1057)
...|+..+.+|+-... .|-..+. ---+.++. ++-.++ |... .+..+|||+.......|
T Consensus 58 --------~~~gVd~V~LPsl~k~~~G~~~~~d~-~~~l~e~~----~~Rs~l---il~t---~~~fkPDi~IVd~~P~G 118 (400)
T COG4671 58 --------GPAGVDFVKLPSLIKGDNGEYGLVDL-DGDLEETK----KLRSQL---ILST---AETFKPDIFIVDKFPFG 118 (400)
T ss_pred --------CcccCceEecCceEecCCCceeeeec-CCCHHHHH----HHHHHH---HHHH---HHhcCCCEEEEeccccc
Confidence 1248888999872210 1111111 11122222 111111 1111 12378999999765444
Q ss_pred HHH------HHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHH
Q 001541 319 DSA------ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQ 392 (1057)
Q Consensus 319 ~~a------~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~ 392 (1057)
... ..+. ..+.+.|.-..++-... .. .-+-.++-..++.+-+.-|.|.+...-.....
T Consensus 119 lr~EL~ptL~yl~-~~~t~~vL~lr~i~D~p-~~--------------~~~~w~~~~~~~~I~r~yD~V~v~GdP~f~d~ 182 (400)
T COG4671 119 LRFELLPTLEYLK-TTGTRLVLGLRSIRDIP-QE--------------LEADWRRAETVRLINRFYDLVLVYGDPDFYDP 182 (400)
T ss_pred hhhhhhHHHHHHh-hcCCcceeehHhhhhch-hh--------------hccchhhhHHHHHHHHhheEEEEecCccccCh
Confidence 221 1222 23445555555542211 00 00111222334556677899988755433333
Q ss_pred HhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchHHHHHhhhCC
Q 001541 393 WRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTN 472 (1057)
Q Consensus 393 ~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1057)
...|+- .+. + +-.+.+.|.= ..-.+..+. |.-+ .+
T Consensus 183 ~~~~~~-~~~----i----------------~~k~~ytG~v-q~~~~~~~~----------------p~~~-------~p 217 (400)
T COG4671 183 LTEFPF-APA----I----------------RAKMRYTGFV-QRSLPHLPL----------------PPHE-------AP 217 (400)
T ss_pred hhcCCc-cHh----h----------------hhheeEeEEe-eccCcCCCC----------------CCcC-------CC
Confidence 222321 221 1 2223333332 100111100 0000 02
Q ss_pred CCCcEEEEEeCCC-CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 473 PRKPVILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 473 ~~~~~Il~vGRl~-~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
....+++++|.-. -..=+...+.|...+.+... +..+|.|.- |.. ...+++.....-.++|....+
T Consensus 218 E~~~Ilvs~GGG~dG~eLi~~~l~A~~~l~~l~~--~~~ivtGP~-----MP~------~~r~~l~~~A~~~p~i~I~~f 284 (400)
T COG4671 218 EGFDILVSVGGGADGAELIETALAAAQLLAGLNH--KWLIVTGPF-----MPE------AQRQKLLASAPKRPHISIFEF 284 (400)
T ss_pred ccceEEEecCCChhhHHHHHHHHHHhhhCCCCCc--ceEEEeCCC-----CCH------HHHHHHHHhcccCCCeEEEEh
Confidence 3356677777532 22234444455544433221 244555542 221 223344444444467877777
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchh--hhhc---CCceE--EeCCC--CHHH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD--IHRV---LDNGL--LVDPH--DQQS 622 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~e--iv~~---~~~Gl--lv~p~--d~~~ 622 (1057)
..++..++..| +..|.- -|+ +|..|-+.+|+|-+.-..+.+.+ +++. ..-|+ +..|. .++.
T Consensus 285 --~~~~~~ll~gA----~~vVSm---~GY-NTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~LGL~dvL~pe~lt~~~ 354 (400)
T COG4671 285 --RNDFESLLAGA----RLVVSM---GGY-NTVCEILSFGKPALIVPRAAPREEQLIRAQRLEELGLVDVLLPENLTPQN 354 (400)
T ss_pred --hhhHHHHHHhh----heeeec---ccc-hhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHhcCcceeeCcccCChHH
Confidence 68999999999 777633 244 46679999999988766554433 2211 01122 22233 3566
Q ss_pred HHHHHHHHHh
Q 001541 623 VADALLKLVA 632 (1057)
Q Consensus 623 la~aI~~ll~ 632 (1057)
++++|..+++
T Consensus 355 La~al~~~l~ 364 (400)
T COG4671 355 LADALKAALA 364 (400)
T ss_pred HHHHHHhccc
Confidence 7777766665
|
|
| >PLN02173 UDP-glucosyl transferase family protein | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.76 Score=54.89 Aligned_cols=94 Identities=15% Similarity=0.137 Sum_probs=59.7
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhc-CCceEEeCCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRV-LDNGLLVDPH 618 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~-~~~Gllv~p~ 618 (1057)
.++.+.+++||.+ +++..+ -++|| .-+-.++++||+++|+|+|+-..-+ ....+.+ -+.|+-+...
T Consensus 317 ~~~~i~~W~PQ~~---iL~H~~--v~~Fv----tHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~ 387 (449)
T PLN02173 317 DKSLVLKWSPQLQ---VLSNKA--IGCFM----THCGWNSTMEGLSLGVPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAE 387 (449)
T ss_pred CceEEeCCCCHHH---HhCCCc--cceEE----ecCccchHHHHHHcCCCEEecCchhcchHHHHHHHHHhCceEEEeec
Confidence 4577779998774 555541 02444 2244578999999999999977543 2223332 2567666421
Q ss_pred ------CHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001541 619 ------DQQSVADALLKLVADKQLWARCRQNGLKN 647 (1057)
Q Consensus 619 ------d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1057)
+.+++++++++++.+++ .+++++++.+.
T Consensus 388 ~~~~~~~~e~v~~av~~vm~~~~-~~~~r~~a~~~ 421 (449)
T PLN02173 388 KESGIAKREEIEFSIKEVMEGEK-SKEMKENAGKW 421 (449)
T ss_pred ccCCcccHHHHHHHHHHHhcCCh-HHHHHHHHHHH
Confidence 67999999999997643 34444444433
|
|
| >PLN00414 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.73 Score=55.08 Aligned_cols=93 Identities=15% Similarity=0.132 Sum_probs=61.5
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEeCC---
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP--- 617 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p--- 617 (1057)
..+.+++||.+ +++.++ .+.||. -+--++++||+++|+|+|+....+ ....+ +..+.|+.+..
T Consensus 314 ~vv~~w~PQ~~---vL~h~~--v~~fvt----H~G~nS~~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~ 384 (446)
T PLN00414 314 IVWEGWVEQPL---ILSHPS--VGCFVN----HCGFGSMWESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDS 384 (446)
T ss_pred eEEeccCCHHH---HhcCCc--cceEEe----cCchhHHHHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccC
Confidence 44568888875 454441 134552 233478999999999999977543 22333 34567777742
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHH
Q 001541 618 --HDQQSVADALLKLVADK-QLWARCRQNGLKN 647 (1057)
Q Consensus 618 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~ 647 (1057)
-+.+++++++++++.++ +..+++++++++.
T Consensus 385 ~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~ 417 (446)
T PLN00414 385 GWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKL 417 (446)
T ss_pred CccCHHHHHHHHHHHhcCChhhHHHHHHHHHHH
Confidence 37899999999999864 4556666666654
|
|
| >PLN02554 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.92 Score=54.86 Aligned_cols=151 Identities=13% Similarity=0.135 Sum_probs=81.5
Q ss_pred HHHhhhCCC--CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccch------hhHHH-HHHH
Q 001541 465 EIMRFFTNP--RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSS------TSASV-LLSV 533 (1057)
Q Consensus 465 ~~~~~~~~~--~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~------~~~~~-~~~l 533 (1057)
+..+++... +..++++.|.+.. .+-+..++.+++.+. ..+.+++..... ..... ...+. -..+
T Consensus 263 ~~~~wLd~~~~~svvyvsfGS~~~~~~~~~~~la~~l~~~~-----~~flW~~~~~~~-~~~~~~~~~~~~~~~~lp~~~ 336 (481)
T PLN02554 263 EILRWLDEQPPKSVVFLCFGSMGGFSEEQAREIAIALERSG-----HRFLWSLRRASP-NIMKEPPGEFTNLEEILPEGF 336 (481)
T ss_pred HHHHHHhcCCCCcEEEEeccccccCCHHHHHHHHHHHHHcC-----CCeEEEEcCCcc-cccccccccccchhhhCChHH
Confidence 344555332 2356788888642 446777777777663 244345543110 00000 00000 0111
Q ss_pred HHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----ch-hhhhc
Q 001541 534 LKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PV-DIHRV 608 (1057)
Q Consensus 534 ~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~-eiv~~ 608 (1057)
.. +. .+++.+.+++|+.+ +++..+ .++||. -+--.+++||+.+|+|+|+....+ .. .+++.
T Consensus 337 ~~---r~--~~~g~v~~W~PQ~~---iL~H~~--v~~Fvt----H~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~ 402 (481)
T PLN02554 337 LD---RT--KDIGKVIGWAPQVA---VLAKPA--IGGFVT----HCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEE 402 (481)
T ss_pred HH---Hh--ccCceEEeeCCHHH---HhCCcc--cCcccc----cCccchHHHHHHcCCCEEecCccccchhhHHHHHHH
Confidence 11 11 24556668888774 443320 044551 223458899999999999976543 22 33445
Q ss_pred CCceEEeCC-------------CCHHHHHHHHHHHHh-CHH
Q 001541 609 LDNGLLVDP-------------HDQQSVADALLKLVA-DKQ 635 (1057)
Q Consensus 609 ~~~Gllv~p-------------~d~~~la~aI~~ll~-d~~ 635 (1057)
.+.|+.++. -+.++++++|.+++. +++
T Consensus 403 ~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~ 443 (481)
T PLN02554 403 LGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQDSD 443 (481)
T ss_pred hCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCCHH
Confidence 566776641 268899999999996 543
|
|
| >PLN02764 glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.86 Score=54.40 Aligned_cols=114 Identities=14% Similarity=0.092 Sum_probs=70.0
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEeCC---
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVDP--- 617 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~p--- 617 (1057)
+...+++|+.+ +++..+ .++||. -+--++++||+++|+|+|+-...+ ....+ +..+.|+.+.+
T Consensus 319 ~v~~~W~PQ~~---vL~h~~--v~~Fvt----H~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~ 389 (453)
T PLN02764 319 VVWGGWVQQPL---ILSHPS--VGCFVS----HCGFGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREET 389 (453)
T ss_pred cEEeCCCCHHH---HhcCcc--cCeEEe----cCCchHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccC
Confidence 56678988885 444430 044662 244578999999999999987654 22233 33355666532
Q ss_pred --CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHhh----cCCHHHHHHHHHHHHHccc
Q 001541 618 --HDQQSVADALLKLVADK-QLWARCRQNGLKNIH----LFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 618 --~d~~~la~aI~~ll~d~-~~~~~~~~~~~~~v~----~fsw~~~a~~~l~~~~~~~ 668 (1057)
-+.+++.+++.+++.++ ++.+++++++++.-+ .=|-....+++++.+.+..
T Consensus 390 ~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~~~~~~GSS~~~l~~lv~~~~~~~ 447 (453)
T PLN02764 390 GWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRETLASPGLLTGYVDNFIESLQDLV 447 (453)
T ss_pred CccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhc
Confidence 27899999999999865 445666666655432 2233334455555554443
|
|
| >TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0032 Score=66.85 Aligned_cols=41 Identities=15% Similarity=0.292 Sum_probs=34.6
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 957 gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.-.|...++.+. ..|. ++++ +||+.| | ++|++.+|.+|||.
T Consensus 130 ~~~K~~~l~~l~-~~~~---~~v~-vGDs~n-D-l~ml~~Ag~~ia~~ 170 (203)
T TIGR02137 130 KDPKRQSVIAFK-SLYY---RVIA-AGDSYN-D-TTMLSEAHAGILFH 170 (203)
T ss_pred cchHHHHHHHHH-hhCC---CEEE-EeCCHH-H-HHHHHhCCCCEEec
Confidence 347999999984 5664 5777 899999 9 99999999999997
|
This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338). |
| >COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.047 Score=62.11 Aligned_cols=241 Identities=12% Similarity=0.049 Sum_probs=133.9
Q ss_pred CcceEEEEcC-CC-chHHHHHHHhcC-CCCEEEEecCC-chhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCE
Q 001541 305 VWPVAIHGHY-AD-AGDSAALLSGAL-NVPMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEI 380 (1057)
Q Consensus 305 ~~pDvIh~h~-~~-~~~~a~~l~~~~-~iP~V~t~H~l-~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~ 380 (1057)
.+||++.+-. ++ .-.++..+.+.. ++|+|+.+--. |.++- .| . ....+.+|+
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~--------------------~R-a---~~i~~~~D~ 139 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRP--------------------KR-A---VKIAKYVDH 139 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeech--------------------hh-H---HHHHHHhhH
Confidence 6799999865 44 344455554432 48988776543 22210 01 0 124678899
Q ss_pred EEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCCCCCCCCCCCCCCCCCCCCCC
Q 001541 381 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPD 459 (1057)
Q Consensus 381 Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p~~~~~~~~~~~~~~~~~~~~ 459 (1057)
|++.-+.|.+.+.+ .|+ .++.|-+.+ |.-.+.+.
T Consensus 140 lLailPFE~~~y~k------------------~g~--------~~~yVGHpl~d~i~~~~~------------------- 174 (381)
T COG0763 140 LLAILPFEPAFYDK------------------FGL--------PCTYVGHPLADEIPLLPD------------------- 174 (381)
T ss_pred eeeecCCCHHHHHh------------------cCC--------CeEEeCChhhhhcccccc-------------------
Confidence 99988877665322 122 234554443 22212211
Q ss_pred CchHHHHHhhhCCCCCcEE-EEEe-CCCC-CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHH
Q 001541 460 PPIWSEIMRFFTNPRKPVI-LALA-RPDP-KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL 536 (1057)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~I-l~vG-Rl~~-~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l 536 (1057)
.-..+.++..+.+++++ +..| |-.. .+.++.+++|++++.+. .+++.+++--... .+...+...
T Consensus 175 --r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~--~~~~~~vlp~~~~---------~~~~~~~~~ 241 (381)
T COG0763 175 --REAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKAR--YPDLKFVLPLVNA---------KYRRIIEEA 241 (381)
T ss_pred --HHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhh--CCCceEEEecCcH---------HHHHHHHHH
Confidence 11234445555665554 4444 3222 46788889999999753 4566666654432 111222222
Q ss_pred HHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-CCC---------------
Q 001541 537 IDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNG--------------- 600 (1057)
Q Consensus 537 ~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-~~G--------------- 600 (1057)
.........+.+. ..+-...+..| |+.+..| |.+.+|++.+|+|+|.+ +..
T Consensus 242 ~~~~~~~~~~~~~----~~~~~~a~~~a----D~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk~~y 308 (381)
T COG0763 242 LKWEVAGLSLILI----DGEKRKAFAAA----DAALAAS-----GTATLEAALAGTPMVVAYKVKPITYFIAKRLVKLPY 308 (381)
T ss_pred hhccccCceEEec----CchHHHHHHHh----hHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHHHHHHhccCCc
Confidence 2222221222222 34777899999 9988876 99999999999999875 222
Q ss_pred -CchhhhhcCCceEEe-----CCCCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 601 -GPVDIHRVLDNGLLV-----DPHDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 601 -g~~eiv~~~~~Gllv-----~p~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
+++.|+.+ -.+| ..-.++.|++++..++.+...++++.+.
T Consensus 309 isLpNIi~~---~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~ 354 (381)
T COG0763 309 VSLPNILAG---REIVPELIQEDCTPENLARALEELLLNGDRREALKEK 354 (381)
T ss_pred ccchHHhcC---CccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHH
Confidence 22223211 0111 1124899999999999998554444433
|
|
| >PLN02210 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.67 Score=55.58 Aligned_cols=136 Identities=13% Similarity=0.179 Sum_probs=76.6
Q ss_pred CCcEEEEEeCCCC--CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCC
Q 001541 474 RKPVILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 474 ~~~~Il~vGRl~~--~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~ 551 (1057)
...+++++|.... .+-+..+..+++.. . ..+.++++.....+. ...+.+... .++....++
T Consensus 269 ~svvyvsfGS~~~~~~~~~~e~a~~l~~~----~-~~flw~~~~~~~~~~--------~~~~~~~~~----~~~g~v~~w 331 (456)
T PLN02210 269 SSVVYISFGSMLESLENQVETIAKALKNR----G-VPFLWVIRPKEKAQN--------VQVLQEMVK----EGQGVVLEW 331 (456)
T ss_pred CceEEEEecccccCCHHHHHHHHHHHHhC----C-CCEEEEEeCCccccc--------hhhHHhhcc----CCCeEEEec
Confidence 3467788887643 23355555555544 2 244455553211000 111111111 133345688
Q ss_pred CCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhc-CCceEEeCC------CCH
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRV-LDNGLLVDP------HDQ 620 (1057)
Q Consensus 552 v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~-~~~Gllv~p------~d~ 620 (1057)
+|+. ++++.++ .++||.- -|+ ++++||+++|+|+|+-...+ ....+.+ .+.|+.++. -+.
T Consensus 332 ~PQ~---~iL~h~~--vg~FitH---~G~-nS~~Eai~~GVP~v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~ 402 (456)
T PLN02210 332 SPQE---KILSHMA--ISCFVTH---CGW-NSTIETVVAGVPVVAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKV 402 (456)
T ss_pred CCHH---HHhcCcC--cCeEEee---CCc-ccHHHHHHcCCCEEecccccccHHHHHHHHHHhCeEEEEeccccCCcCCH
Confidence 8876 4666661 1255521 233 47899999999999977544 2223333 567877742 377
Q ss_pred HHHHHHHHHHHhCHH
Q 001541 621 QSVADALLKLVADKQ 635 (1057)
Q Consensus 621 ~~la~aI~~ll~d~~ 635 (1057)
+++++++++++.+++
T Consensus 403 ~~l~~av~~~m~~~~ 417 (456)
T PLN02210 403 EEVERCIEAVTEGPA 417 (456)
T ss_pred HHHHHHHHHHhcCch
Confidence 999999999997643
|
|
| >PRK02797 4-alpha-L-fucosyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.41 Score=53.26 Aligned_cols=169 Identities=12% Similarity=0.025 Sum_probs=111.0
Q ss_pred CcEEEEEeC-CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCE-EeCCCC
Q 001541 475 KPVILALAR-PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV-AYPKHH 552 (1057)
Q Consensus 475 ~~~Il~vGR-l~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V-~f~g~v 552 (1057)
.++.+-+|. -|+.-+....++++.+.. ..++.+++-=+ +..+++.|..++.+...++--.+++ .+...+
T Consensus 145 ~~~tIlvGNSgd~SN~Hie~L~~l~~~~----~~~v~ii~Pls-----Yp~gn~~Yi~~V~~~~~~lF~~~~~~~L~e~l 215 (322)
T PRK02797 145 GKMTILVGNSGDRSNRHIEALRALHQQF----GDNVKIIVPMG-----YPANNQAYIEEVRQAGLALFGAENFQILTEKL 215 (322)
T ss_pred CceEEEEeCCCCCcccHHHHHHHHHHHh----CCCeEEEEECC-----cCCCCHHHHHHHHHHHHHhcCcccEEehhhhC
Confidence 455555664 678888888888887764 34566555322 1123467899999998888653454 557789
Q ss_pred CCCcHHHHHHHhhcCCcEEEEcC-CCCCCCHHHHHHHHcCCcEEEcC-CCCchhhhhcCCceEEeCCC--CHHHHHHHHH
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLIEAAAHGLPIVATK-NGGPVDIHRVLDNGLLVDPH--DQQSVADALL 628 (1057)
Q Consensus 553 ~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~~lEAmA~G~PVVat~-~Gg~~eiv~~~~~Gllv~p~--d~~~la~aI~ 628 (1057)
+.+|..++++.| |+.++-- ...++|..++ .+..|+||+.+. +.-..++.+.+- -++++.. |...+.++
T Consensus 216 ~f~eYl~lL~~~----Dl~~f~~~RQQgiGnl~l-Li~~G~~v~l~r~n~fwqdl~e~gv-~Vlf~~d~L~~~~v~e~-- 287 (322)
T PRK02797 216 PFDDYLALLRQC----DLGYFIFARQQGIGTLCL-LIQLGKPVVLSRDNPFWQDLTEQGL-PVLFTGDDLDEDIVREA-- 287 (322)
T ss_pred CHHHHHHHHHhC----CEEEEeechhhHHhHHHH-HHHCCCcEEEecCCchHHHHHhCCC-eEEecCCcccHHHHHHH--
Confidence 999999999999 9998875 5678887654 678899998875 666777765432 2334322 22222221
Q ss_pred HHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHcccC
Q 001541 629 KLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 629 ~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~~~~~~ 669 (1057)
.+++...-++.+. |+-+...+.|.++++...+
T Consensus 288 --------~rql~~~dk~~I~-Ff~pn~~~~W~~~l~~~~g 319 (322)
T PRK02797 288 --------QRQLASVDKNIIA-FFSPNYLQGWRNALAIAAG 319 (322)
T ss_pred --------HHHHHhhCcceee-ecCHhHHHHHHHHHHHhhC
Confidence 1222222223333 9999999999999986554
|
|
| >TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458 | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.00065 Score=75.01 Aligned_cols=63 Identities=8% Similarity=0.036 Sum_probs=50.6
Q ss_pred eEEEEEecCCCC--Cc----chHHHHHHHHHHHhhhcCCCeEEEEECCCCHH---HHHHHHHhCCCCCCCCCeEEeC
Q 001541 775 HIFVISVDCDST--TG----LLDATKKICEAVEKERTEGSIGFILSTSMTIS---EIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 775 kLi~~DiDGTL~--~~----i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~---~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
|+|+||+||||. .. +.+.+.++|++++++ |+.|+++|||+.. .+...++.+|++. .++-++++
T Consensus 2 k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~----G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~-~~~~i~ts 73 (257)
T TIGR01458 2 KGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGA----SVKVRFVTNTTKESKQDLLERLQRLGFDI-SEDEVFTP 73 (257)
T ss_pred CEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHcCCCC-CHHHeEcH
Confidence 689999999992 23 777999999999987 9999999987655 5778889999863 34556664
|
This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published. |
| >TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0087 Score=78.42 Aligned_cols=41 Identities=10% Similarity=-0.028 Sum_probs=38.6
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|++++++ |+.++++|||++..+..+.+++|+
T Consensus 567 Dplr~~v~~aI~~l~~~----Gi~v~~~TGd~~~ta~~ia~~~gi 607 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKGVGI 607 (997)
T ss_pred CCChHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 56788999999999997 999999999999999999999998
|
Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps. |
| >PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0087 Score=61.32 Aligned_cols=148 Identities=13% Similarity=0.121 Sum_probs=76.0
Q ss_pred CCeEEEEccCCCcccccccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcC-CCchHHHHHHHhcC-C
Q 001541 252 SGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHY-ADAGDSAALLSGAL-N 329 (1057)
Q Consensus 252 ~gv~i~rip~~p~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~-~~~~~~a~~l~~~~-~ 329 (1057)
+||+++++...+ -......+++..+...+++--. ..+++.+.... +..||||.+|. |-.++ .++..+ +
T Consensus 19 ~GV~~~~y~~~~----~~~~~~~~~~~~~e~~~~rg~a-v~~a~~~L~~~--Gf~PDvI~~H~GWGe~L---flkdv~P~ 88 (171)
T PF12000_consen 19 PGVRVVRYRPPR----GPTPGTHPYVRDFEAAVLRGQA-VARAARQLRAQ--GFVPDVIIAHPGWGETL---FLKDVFPD 88 (171)
T ss_pred CCcEEEEeCCCC----CCCCCCCcccccHHHHHHHHHH-HHHHHHHHHHc--CCCCCEEEEcCCcchhh---hHHHhCCC
Confidence 488888876522 2334556777777665543322 22222222222 46799999997 33322 333334 7
Q ss_pred CCEEEEecCCchhhHHHHHHhhhcc--hHHHHHHHHHHHHHHHHHHHhhcCCEEEecCHHHHHHHHhhhCCCChHHHHHH
Q 001541 330 VPMLFTGHSLGRDKLEQLLKQARLS--RDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1057)
Q Consensus 330 iP~V~t~H~l~~~~~~~l~~~g~~~--~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l 407 (1057)
+|+|...--.+...-. ..|.-+ ........+...+-..-...+..||..++.|......+ .+.+.
T Consensus 89 a~li~Y~E~~y~~~g~---d~~FDpe~p~~~~~~~~~r~rN~~~l~~l~~~D~~isPT~wQ~~~f-------P~~~r--- 155 (171)
T PF12000_consen 89 APLIGYFEFYYRASGA---DVGFDPEFPPSLDDRARLRMRNAHNLLALEQADAGISPTRWQRSQF-------PAEFR--- 155 (171)
T ss_pred CcEEEEEEEEecCCCC---cCCCCCCCCCCHHHHHHHHHHhHHHHHHHHhCCcCcCCCHHHHHhC-------CHHHH---
Confidence 8876533211100000 000000 00111111111111123457889999999999865542 22211
Q ss_pred HHhHhccccccCCCCCcEEEeCCCCCCCCc
Q 001541 408 RARIKRNVSCYGKFMPRMAIIPPGMEFHHI 437 (1057)
Q Consensus 408 ~~~~~~gv~~~g~~~~rv~VIpnGiD~~~f 437 (1057)
+|+.||+-|||++.+
T Consensus 156 ---------------~kI~VihdGiDt~~~ 170 (171)
T PF12000_consen 156 ---------------SKISVIHDGIDTDRF 170 (171)
T ss_pred ---------------cCcEEeecccchhhc
Confidence 289999999999865
|
This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important. |
| >PF08550 DUF1752: Fungal protein of unknown function (DUF1752); InterPro: IPR013860 This entry represents fungal proteins of unknown function | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0004 Score=48.94 Aligned_cols=24 Identities=33% Similarity=0.799 Sum_probs=18.0
Q ss_pred HhccChhhhhhhhhhhhHHHHHhh
Q 001541 63 QATRSPQERNTRLENMCWRIWNLA 86 (1057)
Q Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~ 86 (1057)
+.++..-+=..||||++||+|+.+
T Consensus 6 ~~~k~~l~~~~RLeN~sWR~w~~~ 29 (29)
T PF08550_consen 6 TKCKDSLPNGERLENLSWRLWNKN 29 (29)
T ss_pred hhhhhhcCcchhHHHHHHHHHhcC
Confidence 344445555789999999999864
|
This short section domain is bounded by two highly conserved tryptophans. The entry contains P34072 from SWISSPROT that is thought to be a negative regulator of RAS-cAMP pathway in S. cerevisiae and the S. pombe member is a GAF1 transcription factor Q10280 from SWISSPROT that is also associated with the zinc finger family GATA PF00320 from PFAM. |
| >PLN02167 UDP-glycosyltransferase family protein | Back alignment and domain information |
|---|
Probab=96.88 E-value=1.7 Score=52.40 Aligned_cols=149 Identities=15% Similarity=0.193 Sum_probs=81.6
Q ss_pred HHHhhhCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHc
Q 001541 465 EIMRFFTNP--RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY 540 (1057)
Q Consensus 465 ~~~~~~~~~--~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~ 540 (1057)
...+++... +..+.+++|.+. ..+-+..++.+++.+. ..+.++++...... ......+-+.+.+ +.
T Consensus 269 ~~~~wld~~~~~svvyvsfGS~~~~~~~~~~ela~~l~~~~-----~~flw~~~~~~~~~--~~~~~~lp~~~~e---r~ 338 (475)
T PLN02167 269 RIMRWLDDQPESSVVFLCFGSLGSLPAPQIKEIAQALELVG-----CRFLWSIRTNPAEY--ASPYEPLPEGFMD---RV 338 (475)
T ss_pred HHHHHHhcCCCCceEEEeecccccCCHHHHHHHHHHHHhCC-----CcEEEEEecCcccc--cchhhhCChHHHH---Hh
Confidence 455555432 346677888763 3445777777777662 24444555321100 0000000011111 11
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc----h-hhhhcCCceEEe
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----V-DIHRVLDNGLLV 615 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~----~-eiv~~~~~Gllv 615 (1057)
.++..+.+++|+.+ +++..+ .+.||.- -|+ ++++||+++|+|+|+-...+= . -+++..+.|+.+
T Consensus 339 --~~rg~v~~w~PQ~~---iL~h~~--vg~fvtH---~G~-nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~ 407 (475)
T PLN02167 339 --MGRGLVCGWAPQVE---ILAHKA--IGGFVSH---CGW-NSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVEL 407 (475)
T ss_pred --ccCeeeeccCCHHH---HhcCcc--cCeEEee---CCc-ccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEe
Confidence 13445568887774 555531 0455522 233 478999999999999765431 1 224445668776
Q ss_pred CC---------CCHHHHHHHHHHHHhCH
Q 001541 616 DP---------HDQQSVADALLKLVADK 634 (1057)
Q Consensus 616 ~p---------~d~~~la~aI~~ll~d~ 634 (1057)
.. -+.++++++|.+++.++
T Consensus 408 ~~~~~~~~~~~~~~~~l~~av~~~m~~~ 435 (475)
T PLN02167 408 RLDYVSAYGEIVKADEIAGAVRSLMDGE 435 (475)
T ss_pred ecccccccCCcccHHHHHHHHHHHhcCC
Confidence 42 26889999999999753
|
|
| >PLN02954 phosphoserine phosphatase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0048 Score=66.39 Aligned_cols=43 Identities=14% Similarity=0.235 Sum_probs=34.1
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 956 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 956 ~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
.+.+|..+++.+++++|+ +++++ +||+.+ | +.|-+.+|..++.
T Consensus 152 ~~~~K~~~i~~~~~~~~~--~~~i~-iGDs~~-D-i~aa~~~~~~~~~ 194 (224)
T PLN02954 152 RSGGKAEAVQHIKKKHGY--KTMVM-IGDGAT-D-LEARKPGGADLFI 194 (224)
T ss_pred CCccHHHHHHHHHHHcCC--CceEE-EeCCHH-H-HHhhhcCCCCEEE
Confidence 456799999999999986 57877 899999 9 9998775555443
|
|
| >TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0018 Score=63.55 Aligned_cols=54 Identities=11% Similarity=0.078 Sum_probs=47.2
Q ss_pred eEEEEEecCCCC-----------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC--------HHHHHHHHHhCCCC
Q 001541 775 HIFVISVDCDST-----------TGLLDATKKICEAVEKERTEGSIGFILSTSMT--------ISEIHSFLVSGHLS 832 (1057)
Q Consensus 775 kLi~~DiDGTL~-----------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~--------~~~i~~~l~~lgl~ 832 (1057)
|+++||+||||. ..+.+.+.++|+.|+++ |+.++|+|+++ ...+..+++.+++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~----g~~l~i~Sn~~~~~~~~~~~~~~~~~l~~~~l~ 73 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEA----GYKVVIVTNQSGIGRGKFSSGRVARRLEELGVP 73 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHC----CCEEEEEECCccccccHHHHHHHHHHHHHCCCC
Confidence 689999999995 35567889999999986 89999999999 78899999999984
|
In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme. |
| >PLN02555 limonoid glucosyltransferase | Back alignment and domain information |
|---|
Probab=96.81 E-value=1.6 Score=52.60 Aligned_cols=94 Identities=21% Similarity=0.194 Sum_probs=59.6
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEeC--
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLVD-- 616 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv~-- 616 (1057)
+++.+.+++|+.++..- .++ ++||. -+--++++||+.+|+|+|+...-+ ....+ +.-+.|+.+.
T Consensus 337 ~~g~v~~W~PQ~~iL~H-~~v----~~Fvt----H~G~nS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~ 407 (480)
T PLN02555 337 DKGKIVQWCPQEKVLAH-PSV----ACFVT----HCGWNSTMEALSSGVPVVCFPQWGDQVTDAVYLVDVFKTGVRLCRG 407 (480)
T ss_pred CceEEEecCCHHHHhCC-Ccc----CeEEe----cCCcchHHHHHHcCCCEEeCCCccccHHHHHHHHHHhCceEEccCC
Confidence 56677788887653322 233 55662 233468899999999999977543 22222 2336677762
Q ss_pred ---C--CCHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Q 001541 617 ---P--HDQQSVADALLKLVADKQLWARCRQNGLKN 647 (1057)
Q Consensus 617 ---p--~d~~~la~aI~~ll~d~~~~~~~~~~~~~~ 647 (1057)
. -+.++++++|.+++.++ +.+++++++++.
T Consensus 408 ~~~~~~v~~~~v~~~v~~vm~~~-~g~~~r~ra~~l 442 (480)
T PLN02555 408 EAENKLITREEVAECLLEATVGE-KAAELKQNALKW 442 (480)
T ss_pred ccccCcCcHHHHHHHHHHHhcCc-hHHHHHHHHHHH
Confidence 1 25789999999999764 345566665544
|
|
| >TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.002 Score=63.14 Aligned_cols=52 Identities=13% Similarity=0.125 Sum_probs=43.4
Q ss_pred eEEEEEecCCCCCc---------------chHHHHHHHHHHHhhhcCCCeEEEEECCC-CHHHHHHHHHhCC
Q 001541 775 HIFVISVDCDSTTG---------------LLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHSFLVSGH 830 (1057)
Q Consensus 775 kLi~~DiDGTL~~~---------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR-~~~~i~~~l~~lg 830 (1057)
|+|++|+||||... +-+.+.+.|+.|+++ |+.++|+|++ +...+...++..+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~----g~~l~i~Sn~~~~~~~~~~l~~~~ 68 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKN----GFLLALASYNDDPHVAYELLKIFE 68 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHC----CeEEEEEeCCCCHHHHHHHHHhcc
Confidence 68999999999311 456899999999986 8999999999 7877778888776
|
No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC. |
| >PLN02645 phosphoglycolate phosphatase | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0021 Score=72.99 Aligned_cols=65 Identities=9% Similarity=0.085 Sum_probs=50.0
Q ss_pred cceEEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC---HHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 773 RKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMT---ISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~---~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
..++|+||+||||. ..+.+...++|+.|+++ |+.|+++|+|+ ...+.+-|+.+|++. .++-++++
T Consensus 27 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~----g~~~~~~TN~~~~~~~~~~~~l~~lGi~~-~~~~I~ts 96 (311)
T PLN02645 27 SVETFIFDCDGVIWKGDKLIEGVPETLDMLRSM----GKKLVFVTNNSTKSRAQYGKKFESLGLNV-TEEEIFSS 96 (311)
T ss_pred hCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHC----CCEEEEEeCCCCCCHHHHHHHHHHCCCCC-ChhhEeeh
Confidence 35699999999992 45667889999999997 89999999999 555555567888863 45555554
|
|
| >PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.17 Score=61.47 Aligned_cols=243 Identities=13% Similarity=0.044 Sum_probs=132.3
Q ss_pred CcceEEEE-cCCCchHHHHHHHhcCCC--CEEEEecCC-chhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCE
Q 001541 305 VWPVAIHG-HYADAGDSAALLSGALNV--PMLFTGHSL-GRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEI 380 (1057)
Q Consensus 305 ~~pDvIh~-h~~~~~~~a~~l~~~~~i--P~V~t~H~l-~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~ 380 (1057)
.+||++.+ .+++...-.+..++..|+ |+|+.+--- |.++ ..|+ +..-+.+|.
T Consensus 309 ~kPD~vIlID~PgFNlrLAK~lkk~Gi~ipviyYVsPqVWAWR---------------------~~Ri---kki~k~vD~ 364 (608)
T PRK01021 309 TNPRTVICIDFPDFHFLLIKKLRKRGYKGKIVHYVCPSIWAWR---------------------PKRK---TILEKYLDL 364 (608)
T ss_pred cCCCEEEEeCCCCCCHHHHHHHHhcCCCCCEEEEECccceeeC---------------------cchH---HHHHHHhhh
Confidence 67999888 455555544444455675 987765432 1111 0111 124566889
Q ss_pred EEecCHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCCCC-CCCCcCCCCCCCCCCCCCCCCCCCCCC
Q 001541 381 VITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGM-EFHHIVPQDGDMDGETEGNEDNPASPD 459 (1057)
Q Consensus 381 Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpnGi-D~~~f~p~~~~~~~~~~~~~~~~~~~~ 459 (1057)
++|.=+.|.+.+.+ +|+ ++..+-++. |.-...+
T Consensus 365 ll~IfPFE~~~y~~------------------~gv--------~v~yVGHPL~d~i~~~~-------------------- 398 (608)
T PRK01021 365 LLLILPFEQNLFKD------------------SPL--------RTVYLGHPLVETISSFS-------------------- 398 (608)
T ss_pred heecCccCHHHHHh------------------cCC--------CeEEECCcHHhhcccCC--------------------
Confidence 99988877664321 222 455565543 3211110
Q ss_pred CchHHHHHhhhCCCCCcEE-EEEe-CCCC-CCCHHHHHHHHH--hcccccCCCcEEEEEecCCCCcccchhhHHHHHHHH
Q 001541 460 PPIWSEIMRFFTNPRKPVI-LALA-RPDP-KKNITTLVKAFG--ECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVL 534 (1057)
Q Consensus 460 ~~~~~~~~~~~~~~~~~~I-l~vG-Rl~~-~Kgi~~Ll~A~~--~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~ 534 (1057)
...+.++++..++++++| +..| |-.+ ++.++.+++|+. .+.+ ++.+++...+.. ..+.+.
T Consensus 399 -~~~~~r~~lgl~~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~-----~l~fvvp~a~~~---------~~~~i~ 463 (608)
T PRK01021 399 -PNLSWKEQLHLPSDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLAS-----THQLLVSSANPK---------YDHLIL 463 (608)
T ss_pred -CHHHHHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhcc-----CeEEEEecCchh---------hHHHHH
Confidence 111223444555566654 4444 4333 467888999998 5532 355555433221 123344
Q ss_pred HHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc-CCCCchh---------
Q 001541 535 KLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT-KNGGPVD--------- 604 (1057)
Q Consensus 535 ~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat-~~Gg~~e--------- 604 (1057)
+..+..+.. .+.+.. ..+-.+++++| |+.+..| |.+.+|++.+|+|+|.. +.+...-
T Consensus 464 ~~~~~~~~~-~~~ii~---~~~~~~~m~aa----D~aLaaS-----GTaTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki 530 (608)
T PRK01021 464 EVLQQEGCL-HSHIVP---SQFRYELMREC----DCALAKC-----GTIVLETALNQTPTIVTCQLRPFDTFLAKYIFKI 530 (608)
T ss_pred HHHhhcCCC-CeEEec---CcchHHHHHhc----CeeeecC-----CHHHHHHHHhCCCEEEEEecCHHHHHHHHHHHhc
Confidence 444433311 122221 11346999999 9999887 99999999999998773 3332211
Q ss_pred ---------hhhcCC-ceEEe---CCCCHHHHHHHHHHHHhCHHHHHHHHHHHHH
Q 001541 605 ---------IHRVLD-NGLLV---DPHDQQSVADALLKLVADKQLWARCRQNGLK 646 (1057)
Q Consensus 605 ---------iv~~~~-~Gllv---~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~ 646 (1057)
++.+.. -=-++ +.-+++.+++++ +++.|++.++++.+.-.+
T Consensus 531 ~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~La~~l-~lL~d~~~r~~~~~~l~~ 584 (608)
T PRK01021 531 ILPAYSLPNIILGSTIFPEFIGGKKDFQPEEVAAAL-DILKTSQSKEKQKDACRD 584 (608)
T ss_pred cCCeeehhHHhcCCCcchhhcCCcccCCHHHHHHHH-HHhcCHHHHHHHHHHHHH
Confidence 111100 00122 234689999996 888888876666554433
|
|
| >PLN03004 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.75 E-value=2.1 Score=51.29 Aligned_cols=152 Identities=10% Similarity=0.102 Sum_probs=85.1
Q ss_pred HHhhhCC--CCCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHH-HHHHHHHHHHHc
Q 001541 466 IMRFFTN--PRKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSAS-VLLSVLKLIDKY 540 (1057)
Q Consensus 466 ~~~~~~~--~~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~-~~~~l~~l~~~~ 540 (1057)
..+++.. ++..+++++|... +.+-+..+..+++.+. . .+..++......+.-...... +-.... ++.
T Consensus 260 c~~wLd~~~~~sVvyvsfGS~~~~~~~q~~ela~gL~~s~----~-~FlW~~r~~~~~~~~~~~~~~~lp~gf~---er~ 331 (451)
T PLN03004 260 CLNWLDSQPEKSVVFLCFGSLGLFSKEQVIEIAVGLEKSG----Q-RFLWVVRNPPELEKTELDLKSLLPEGFL---SRT 331 (451)
T ss_pred HHHHHHhCCCCceEEEEecccccCCHHHHHHHHHHHHHCC----C-CEEEEEcCCccccccccchhhhCChHHH---Hhc
Confidence 3444432 3456778888864 3455667777777653 2 343455421110000000000 001111 111
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhh-hcCCceEEe
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLV 615 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv-~~~~~Gllv 615 (1057)
. ..++...+++||.+ +++.+ +|..+-+ -+--++++||+++|+|+|+....+ ....+ ...+.|+.+
T Consensus 332 ~-~~g~~v~~W~PQ~~---iL~H~----~v~~FvT--H~G~nS~lEal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l 401 (451)
T PLN03004 332 E-DKGMVVKSWAPQVP---VLNHK----AVGGFVT--HCGWNSILEAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISM 401 (451)
T ss_pred c-CCcEEEEeeCCHHH---HhCCC----ccceEec--cCcchHHHHHHHcCCCEEeccccccchhhHHHHHHHhCceEEe
Confidence 1 24577788988885 66677 5622222 233468899999999999976433 23333 334678777
Q ss_pred CC-----CCHHHHHHHHHHHHhCHH
Q 001541 616 DP-----HDQQSVADALLKLVADKQ 635 (1057)
Q Consensus 616 ~p-----~d~~~la~aI~~ll~d~~ 635 (1057)
+. -+.++++++|.+++.++.
T Consensus 402 ~~~~~~~~~~e~l~~av~~vm~~~~ 426 (451)
T PLN03004 402 NESETGFVSSTEVEKRVQEIIGECP 426 (451)
T ss_pred cCCcCCccCHHHHHHHHHHHhcCHH
Confidence 53 278999999999998754
|
|
| >PRK10671 copA copper exporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0099 Score=76.67 Aligned_cols=54 Identities=9% Similarity=0.122 Sum_probs=46.3
Q ss_pred ceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 774 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 774 kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
...+++..||++ ...+-+..+++|+.+++. |+.++++||.+...+..+++++|+
T Consensus 630 ~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~----gi~v~~~Tgd~~~~a~~ia~~lgi 689 (834)
T PRK10671 630 ATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKA----GYRLVMLTGDNPTTANAIAKEAGI 689 (834)
T ss_pred CeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 456778888886 256677889999999886 899999999999999999999987
|
|
| >COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.3 Score=52.48 Aligned_cols=198 Identities=14% Similarity=0.086 Sum_probs=112.7
Q ss_pred CcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEec
Q 001541 305 VWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITS 384 (1057)
Q Consensus 305 ~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~ 384 (1057)
.+||+|++..-.+..++..+.++.+.+.++.+.+.- .-.+.-|.||.+
T Consensus 69 ~~Pdl~I~aGrrta~l~~~lkk~~~~~~vVqI~~Pr--------------------------------lp~~~fDlvivp 116 (329)
T COG3660 69 QRPDLIITAGRRTAPLAFYLKKKFGGIKVVQIQDPR--------------------------------LPYNHFDLVIVP 116 (329)
T ss_pred CCCceEEecccchhHHHHHHHHhcCCceEEEeeCCC--------------------------------CCcccceEEecc
Confidence 579999999888888889999888887666655431 013456889998
Q ss_pred CHHHHHHHHhhhCCCChHHHHHHHHhHhccccccCCCCCcEEEeCC-CCCCCCcCCCCCCCCCCCCCCCCCCCCCCCchH
Q 001541 385 TRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP-GMEFHHIVPQDGDMDGETEGNEDNPASPDPPIW 463 (1057)
Q Consensus 385 S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~rv~VIpn-GiD~~~f~p~~~~~~~~~~~~~~~~~~~~~~~~ 463 (1057)
-++.++++... ...++|. |. +..+.+. ......
T Consensus 117 ~HD~~~~~s~~----------------------------~~Nilpi~Gs-~h~Vt~~-----------------~lAa~~ 150 (329)
T COG3660 117 YHDWREELSDQ----------------------------GPNILPINGS-PHNVTSQ-----------------RLAALR 150 (329)
T ss_pred chhhhhhhhcc----------------------------CCceeeccCC-CCcccHH-----------------HhhhhH
Confidence 88766653211 1223442 22 2222211 111222
Q ss_pred HHHHhhhCCCCCcEEEEEeCCCCCCCH-----HHHHHHHHhcccccCCCcEEE-EEecCCCCcccchhhHHHHHHHHHHH
Q 001541 464 SEIMRFFTNPRKPVILALARPDPKKNI-----TTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLI 537 (1057)
Q Consensus 464 ~~~~~~~~~~~~~~Il~vGRl~~~Kgi-----~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~l~~l~ 537 (1057)
+..+.++..+...+-+.||.-.+.-.+ ..+..++.+..+ .....+ +--.+... ..+..++
T Consensus 151 e~~~~~~p~~rq~vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~---~~g~~~lisfSRRTp-----------~~~~s~l 216 (329)
T COG3660 151 EAFKHLLPLPRQRVAVLVGGNNKAFVFQEDKAHQFASLLVKILE---NQGGSFLISFSRRTP-----------DTVKSIL 216 (329)
T ss_pred HHHHhhCCCCCceEEEEecCCCCCCccCHHHHHHHHHHHHHHHH---hCCceEEEEeecCCc-----------HHHHHHH
Confidence 333444445666778899987665544 223333333322 122223 33344332 2333444
Q ss_pred HH-cCCCCCEEeCCCC-CCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC
Q 001541 538 DK-YDLYGQVAYPKHH-KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 601 (1057)
Q Consensus 538 ~~-~~l~~~V~f~g~v-~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg 601 (1057)
.. +.-.+.+.+.+.- ...-..+++.+| |.+|.+.-.-.| +-||+++|+||-+-...+
T Consensus 217 ~~~l~s~~~i~w~~~d~g~NPY~~~La~A----dyii~TaDSinM---~sEAasTgkPv~~~~~~~ 275 (329)
T COG3660 217 KNNLNSSPGIVWNNEDTGYNPYIDMLAAA----DYIISTADSINM---CSEAASTGKPVFILEPPN 275 (329)
T ss_pred HhccccCceeEeCCCCCCCCchHHHHhhc----ceEEEecchhhh---hHHHhccCCCeEEEecCC
Confidence 44 4444556665541 234578999999 999998643333 679999999998765443
|
|
| >TIGR01664 DNA-3'-Pase DNA 3'-phosphatase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0037 Score=64.19 Aligned_cols=65 Identities=12% Similarity=0.190 Sum_probs=47.6
Q ss_pred CcceEEEEEecCCCCCc---------------chHHHHHHHHHHHhhhcCCCeEEEEECCCCH------------HHHHH
Q 001541 772 RRKHIFVISVDCDSTTG---------------LLDATKKICEAVEKERTEGSIGFILSTSMTI------------SEIHS 824 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~~~---------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~------------~~i~~ 824 (1057)
...|+++||+||||... +-+.+.++|+.|+++ |+.++|+|..+. ..+..
T Consensus 11 ~~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~TN~~~~~~~~~~~~~~~~~i~~ 86 (166)
T TIGR01664 11 PQSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDE----GYKIVIFTNQSGIGRGKLSAESFKNKIEA 86 (166)
T ss_pred CcCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHC----CCEEEEEeCCcccccCcccHHHHHHHHHH
Confidence 35689999999999421 125688999999986 899999996443 24678
Q ss_pred HHHhCCCCCCCCCeEEeCC
Q 001541 825 FLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 825 ~l~~lgl~~~~~D~lI~~n 843 (1057)
+++.+|+. ++.+|+++
T Consensus 87 ~l~~~gl~---~~~ii~~~ 102 (166)
T TIGR01664 87 FLEKLKVP---IQVLAATH 102 (166)
T ss_pred HHHHcCCC---EEEEEecC
Confidence 89999984 34555544
|
The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region. |
| >COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.034 Score=61.26 Aligned_cols=67 Identities=10% Similarity=0.034 Sum_probs=48.6
Q ss_pred CcceEEEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEEC---CCCHHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 772 RRKHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIaT---GR~~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
.+.+.++||+|||+ -...-+...++|+.|+++ |+.+++.| .|+...+...|..++.....+|.++++
T Consensus 6 ~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~----g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS 77 (269)
T COG0647 6 DKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAA----GKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTS 77 (269)
T ss_pred hhcCEEEEcCcCceEeCCccCchHHHHHHHHHHc----CCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecH
Confidence 45678999999999 245556889999999997 78777765 567776788888844422345556654
|
|
| >PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long) | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.75 Score=51.96 Aligned_cols=141 Identities=11% Similarity=0.048 Sum_probs=94.1
Q ss_pred CcEEEEEe-CCCCCCCHHHHHHHHHhcccccCCCcEEEEE--ecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEe-CC
Q 001541 475 KPVILALA-RPDPKKNITTLVKAFGECRPLRELANLTLIM--GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY-PK 550 (1057)
Q Consensus 475 ~~~Il~vG-Rl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIv--G~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f-~g 550 (1057)
+++-+-+| .-++.-+....++++.+.. ..++.+++ |=+. .+++|..++.+...++--.+++.. ..
T Consensus 184 ~~ltILvGNSgd~sNnHieaL~~L~~~~----~~~~kIivPLsYg~-------~n~~Yi~~V~~~~~~lF~~~~~~iL~e 252 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEALEALKQQF----GDDVKIIVPLSYGA-------NNQAYIQQVIQAGKELFGAENFQILTE 252 (360)
T ss_pred CceEEEEcCCCCCCccHHHHHHHHHHhc----CCCeEEEEECCCCC-------chHHHHHHHHHHHHHhcCccceeEhhh
Confidence 44545555 4678888888888887643 23455544 3332 245788889998888755556654 57
Q ss_pred CCCCCcHHHHHHHhhcCCcEEEEcC-CCCCCCHHHHHHHHcCCcEEEcCC-CCchhhhhcCCceEEe--CCCCHHHHHHH
Q 001541 551 HHKQSDVPEIYRLAAKTKGVFINPA-FIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLV--DPHDQQSVADA 626 (1057)
Q Consensus 551 ~v~~~dl~~ly~~Aa~~~dv~v~ps-~~Egfgl~~lEAmA~G~PVVat~~-Gg~~eiv~~~~~Gllv--~p~d~~~la~a 626 (1057)
++|.+|..++++.| |+.++.. ...++|..+ =.+.+|+||+.+.. .-..++.+.+ --+++ +.-|...+.+|
T Consensus 253 ~mpf~eYl~lL~~c----Dl~if~~~RQQgiGnI~-lLl~~G~~v~L~~~np~~~~l~~~~-ipVlf~~d~L~~~~v~ea 326 (360)
T PF07429_consen 253 FMPFDEYLALLSRC----DLGIFNHNRQQGIGNIC-LLLQLGKKVFLSRDNPFWQDLKEQG-IPVLFYGDELDEALVREA 326 (360)
T ss_pred hCCHHHHHHHHHhC----CEEEEeechhhhHhHHH-HHHHcCCeEEEecCChHHHHHHhCC-CeEEeccccCCHHHHHHH
Confidence 99999999999999 9999997 567888754 46889999988774 4445554432 22333 44455666665
Q ss_pred HHHHHh
Q 001541 627 LLKLVA 632 (1057)
Q Consensus 627 I~~ll~ 632 (1057)
=+++..
T Consensus 327 ~rql~~ 332 (360)
T PF07429_consen 327 QRQLAN 332 (360)
T ss_pred HHHHhh
Confidence 555544
|
This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall |
| >TIGR01497 kdpB K+-transporting ATPase, B subunit | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.024 Score=70.39 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=48.6
Q ss_pred cceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+++..|+++ ...+.+..+++++.+++. |+.+++.||-....+..+.+++|+
T Consensus 425 G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~----Gi~v~miTGD~~~ta~~iA~~lGI 485 (675)
T TIGR01497 425 GGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKM----GIKTIMITGDNRLTAAAIAAEAGV 485 (675)
T ss_pred CCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3467888888887 356788999999999997 999999999999999999999998
|
One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR. |
| >PLN02534 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=96.44 E-value=3.4 Score=50.01 Aligned_cols=92 Identities=20% Similarity=0.143 Sum_probs=56.6
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcE--EEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchh-----hhhcCCceEEeC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGV--FINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVD-----IHRVLDNGLLVD 616 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv--~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~e-----iv~~~~~Gllv~ 616 (1057)
..+.+.+++|+.+ ++... ++ ||. -+-.++++||+++|+|+|+-...+-.- +++.-+.|+-+.
T Consensus 344 ~g~~v~~w~pq~~---iL~h~----~v~~fvt----H~G~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~ 412 (491)
T PLN02534 344 RGLLIKGWAPQVL---ILSHP----AIGGFLT----HCGWNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVG 412 (491)
T ss_pred CCeeccCCCCHHH---HhcCC----ccceEEe----cCccHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEec
Confidence 3567789998854 56565 44 552 344568999999999999987543211 222223444331
Q ss_pred ---------------CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001541 617 ---------------PHDQQSVADALLKLVAD-KQLWARCRQNGLK 646 (1057)
Q Consensus 617 ---------------p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 646 (1057)
--+.++++++|++++.+ .++-+++++++.+
T Consensus 413 ~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~~R~rA~e 458 (491)
T PLN02534 413 VEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGERRRRRAQE 458 (491)
T ss_pred ccccccccccccccCccCHHHHHHHHHHHhccccccHHHHHHHHHH
Confidence 02578999999999962 2333445555443
|
|
| >TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family | Back alignment and domain information |
|---|
Probab=96.38 E-value=0.0046 Score=69.19 Aligned_cols=65 Identities=8% Similarity=0.075 Sum_probs=48.5
Q ss_pred cceEEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC---HHHHHHHHHhCCCCCCCCCeEEeC
Q 001541 773 RKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMT---ISEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~---~~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
|.++|+||+||||. ....+.+.++|+.|+++ |+.|+++|+|+ ...+...++.+|++. .++-++++
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~----g~~~~~~Tnns~~~~~~~~~~l~~~G~~~-~~~~i~ts 70 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARA----GKAALFVTNNSTKSRAEYALKFARLGFNG-LAEQLFSS 70 (279)
T ss_pred CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHC----CCeEEEEeCCCCCCHHHHHHHHHHcCCCC-ChhhEecH
Confidence 35789999999992 44455689999999986 89999999976 555556778888853 23445553
|
This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association. |
| >COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.04 Score=67.84 Aligned_cols=138 Identities=14% Similarity=0.118 Sum_probs=104.6
Q ss_pred CCCCcEEEEEeCCCCCCCHHHHHHH----HHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEE
Q 001541 472 NPRKPVILALARPDPKKNITTLVKA----FGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVA 547 (1057)
Q Consensus 472 ~~~~~~Il~vGRl~~~Kgi~~Ll~A----~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~ 547 (1057)
+|+...++++=|+...|.....+.- +..+++ ...|.+.+|.|+...+... ........|+..++..+...+|.
T Consensus 484 ~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~-d~~prv~~iFaGKAhP~y~--~aK~iIk~I~~~a~~in~~lkVv 560 (750)
T COG0058 484 DPNALFDGQARRIHEYKRQLLNLLDIERLYRILKE-DWVPRVQIIFAGKAHPADY--AAKEIIKLINDVADVINNKLKVV 560 (750)
T ss_pred CCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhc-CCCCceEEEEeccCCCcch--HHHHHHHHHHHHHHhhcccceEE
Confidence 4678899999999999976654433 333332 2345666565555443332 23557788888888887777899
Q ss_pred eCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhh--cCCceEEeC
Q 001541 548 YPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHR--VLDNGLLVD 616 (1057)
Q Consensus 548 f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~--~~~~Gllv~ 616 (1057)
|+...+-.-..-++.+| ||-.+.|. .|..|..=+=|+.-|.|-|+|..|...|+.+ .+.||+++-
T Consensus 561 Fl~nYdvslA~~iipa~----Dvweqis~a~~EASGTsnMK~alNGaltigtlDGanvEi~e~vg~~N~~~fG 629 (750)
T COG0058 561 FLPNYDVSLAELLIPAA----DVWEQIPTAGKEASGTSNMKAALNGALTLGTLDGANVEIYEHVGGENGWIFG 629 (750)
T ss_pred EeCCCChhHHHhhcccc----cccccCCCCCccccCcCcchHHhcCCceeeccccHHHHHHHhcCCCceEEeC
Confidence 99887666666677777 99999875 6888888889999999999999999999997 789999994
|
|
| >COG1817 Uncharacterized protein conserved in archaea [Function unknown] | Back alignment and domain information |
|---|
Probab=96.23 E-value=1.5 Score=48.74 Aligned_cols=136 Identities=16% Similarity=0.263 Sum_probs=77.1
Q ss_pred HHHhhhCCCCCcEEEE-Ee-----CCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 465 EIMRFFTNPRKPVILA-LA-----RPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 465 ~~~~~~~~~~~~~Il~-vG-----Rl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
.+++.+..++.++|+. .- -....+++..+.+++.++.+ .. . +++ .++. ...+.++
T Consensus 172 vlkeLgl~~~~~yIVmRpe~~~A~y~~g~~~~~~~~~li~~l~k---~g-i-V~i-pr~~-------------~~~eife 232 (346)
T COG1817 172 VLKELGLEEGETYIVMRPEPWGAHYDNGDRGISVLPDLIKELKK---YG-I-VLI-PREK-------------EQAEIFE 232 (346)
T ss_pred HHHHcCCCCCCceEEEeeccccceeeccccchhhHHHHHHHHHh---Cc-E-EEe-cCch-------------hHHHHHh
Confidence 4555666666566543 11 12235677778888888753 22 2 233 2221 1223344
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC---CchhhhhcCCceEEe
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG---GPVDIHRVLDNGLLV 615 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G---g~~eiv~~~~~Gllv 615 (1057)
.+. ++..+... .+.+.-+|. | +.++ .+-|.-.-||++.|+|.|++..| +.-+... +.|+++
T Consensus 233 ~~~---n~i~pk~~-vD~l~Llyy-a----~lvi-----g~ggTMarEaAlLGtpaIs~~pGkll~vdk~li--e~G~~~ 296 (346)
T COG1817 233 GYR---NIIIPKKA-VDTLSLLYY-A----TLVI-----GAGGTMAREAALLGTPAISCYPGKLLAVDKYLI--EKGLLY 296 (346)
T ss_pred hhc---cccCCccc-ccHHHHHhh-h----heee-----cCCchHHHHHHHhCCceEEecCCccccccHHHH--hcCcee
Confidence 332 23333321 122333444 4 4555 23466678999999999999855 3333332 468999
Q ss_pred CCCCHHHHHHHHHHHHhCHH
Q 001541 616 DPHDQQSVADALLKLVADKQ 635 (1057)
Q Consensus 616 ~p~d~~~la~aI~~ll~d~~ 635 (1057)
+-.|+.++.+...+.+.++.
T Consensus 297 ~s~~~~~~~~~a~~~l~~~~ 316 (346)
T COG1817 297 HSTDEIAIVEYAVRNLKYRR 316 (346)
T ss_pred ecCCHHHHHHHHHHHhhchh
Confidence 88888888887777777664
|
|
| >PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins | Back alignment and domain information |
|---|
Probab=96.20 E-value=0.16 Score=57.53 Aligned_cols=111 Identities=15% Similarity=0.109 Sum_probs=66.1
Q ss_pred CCCCcEEEEEeCCCCCC--CHH---HHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCE
Q 001541 472 NPRKPVILALARPDPKK--NIT---TLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQV 546 (1057)
Q Consensus 472 ~~~~~~Il~vGRl~~~K--gi~---~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V 546 (1057)
.+...+.+.||.....- +-+ .+++.+..+.+... ..+ +|...+-... +....+.++.+ -.+.+
T Consensus 144 l~~p~~avLIGG~s~~~~~~~~~~~~l~~~l~~~~~~~~-~~~-~vttSRRTp~-------~~~~~L~~~~~---~~~~~ 211 (311)
T PF06258_consen 144 LPRPRVAVLIGGDSKHYRWDEEDAERLLDQLAALAAAYG-GSL-LVTTSRRTPP-------EAEAALRELLK---DNPGV 211 (311)
T ss_pred CCCCeEEEEECcCCCCcccCHHHHHHHHHHHHHHHHhCC-CeE-EEEcCCCCcH-------HHHHHHHHhhc---CCCce
Confidence 34556677888755332 333 55555555543222 123 3555554322 22333444333 33566
Q ss_pred EeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC
Q 001541 547 AYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG 601 (1057)
Q Consensus 547 ~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg 601 (1057)
.+...-+..-+..+|..| |.+++|.-.-.| +.||+++|+||..-...+
T Consensus 212 ~~~~~~~~nPy~~~La~a----d~i~VT~DSvSM---vsEA~~tG~pV~v~~l~~ 259 (311)
T PF06258_consen 212 YIWDGTGENPYLGFLAAA----DAIVVTEDSVSM---VSEAAATGKPVYVLPLPG 259 (311)
T ss_pred EEecCCCCCcHHHHHHhC----CEEEEcCccHHH---HHHHHHcCCCEEEecCCC
Confidence 444555566699999999 999999643222 689999999998877655
|
The function of this family is unknown. |
| >PRK13223 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.0067 Score=67.57 Aligned_cols=51 Identities=24% Similarity=0.169 Sum_probs=42.1
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEeCCCc
Q 001541 954 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 954 ~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~-gVAMgNa~ 1007 (1057)
++..-.+...++++++++|++++++++ +||+.+ | ++|-+.+|. ++.+.++.
T Consensus 153 ~~~~Kp~p~~~~~~~~~~g~~~~~~l~-IGD~~~-D-i~aA~~aGi~~i~v~~G~ 204 (272)
T PRK13223 153 LPQKKPDPAALLFVMKMAGVPPSQSLF-VGDSRS-D-VLAAKAAGVQCVALSYGY 204 (272)
T ss_pred CCCCCCCcHHHHHHHHHhCCChhHEEE-ECCCHH-H-HHHHHHCCCeEEEEecCC
Confidence 455566788999999999999999998 888888 9 999999997 45665543
|
|
| >PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.0089 Score=56.02 Aligned_cols=52 Identities=13% Similarity=0.106 Sum_probs=41.9
Q ss_pred EEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEEC---CCCHHHHHHHHHhCCCC
Q 001541 777 FVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 777 i~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIaT---GR~~~~i~~~l~~lgl~ 832 (1057)
|+||+|||| ...+-+...++|++|++. |..|++.| +|+.......|+.+|++
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~----g~~~~~lTNns~~s~~~~~~~L~~~Gi~ 57 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRER----GKPVVFLTNNSSRSREEYAKKLKKLGIP 57 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHT----TSEEEEEES-SSS-HHHHHHHHHHTTTT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHc----CCCEEEEeCCCCCCHHHHHHHHHhcCcC
Confidence 689999999 355667889999999997 78888876 56777888888999995
|
... |
| >PLN03015 UDP-glucosyl transferase | Back alignment and domain information |
|---|
Probab=95.93 E-value=5.7 Score=47.77 Aligned_cols=92 Identities=16% Similarity=0.176 Sum_probs=55.8
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCc----hhhh-hcCCceEEeC----
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLLVD---- 616 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~----~eiv-~~~~~Gllv~---- 616 (1057)
+.+.+++||.++.. ..+ .+.||. -+--++.+||+.+|+|+|+-..-+- ...+ +..+.|+-+.
T Consensus 337 l~v~~W~PQ~~vL~---h~~--vg~fvt----H~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~ 407 (470)
T PLN03015 337 LVVTQWAPQVEILS---HRS--IGGFLS----HCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPS 407 (470)
T ss_pred eEEEecCCHHHHhc---cCc--cCeEEe----cCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEeccccc
Confidence 55678888876544 431 034552 2333588999999999999775431 1222 3345566663
Q ss_pred --CCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Q 001541 617 --PHDQQSVADALLKLVAD-KQLWARCRQNGLK 646 (1057)
Q Consensus 617 --p~d~~~la~aI~~ll~d-~~~~~~~~~~~~~ 646 (1057)
.-..++++++|++++.. .++-+++++++++
T Consensus 408 ~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~~ 440 (470)
T PLN03015 408 EKVIGREEVASLVRKIVAEEDEEGQKIRAKAEE 440 (470)
T ss_pred CCccCHHHHHHHHHHHHccCcccHHHHHHHHHH
Confidence 13678999999999952 1233455555443
|
|
| >PF08288 PIGA: PIGA (GPI anchor biosynthesis); InterPro: IPR013234 This domain is found on phosphatidylinositol N-acetylglucosaminyltransferase proteins | Back alignment and domain information |
|---|
Probab=95.92 E-value=0.02 Score=51.20 Aligned_cols=36 Identities=31% Similarity=0.320 Sum_probs=29.7
Q ss_pred CcceEEEEcCCCc--hHHHHHHHhcCCCCEEEEecCCc
Q 001541 305 VWPVAIHGHYADA--GDSAALLSGALNVPMLFTGHSLG 340 (1057)
Q Consensus 305 ~~pDvIh~h~~~~--~~~a~~l~~~~~iP~V~t~H~l~ 340 (1057)
++.||||+|.+.+ +.-+.+.++.+|++.|+|-||+.
T Consensus 49 E~I~IVHgH~a~S~l~hE~i~hA~~mGlktVfTDHSLf 86 (90)
T PF08288_consen 49 ERIDIVHGHQAFSTLCHEAILHARTMGLKTVFTDHSLF 86 (90)
T ss_pred cCeeEEEeehhhhHHHHHHHHHHHhCCCcEEeeccccc
Confidence 5799999998744 33467778899999999999984
|
These proteins are involved in GPI anchor biosynthesis and are associated with the disease paroxysmal nocturnal haemoglobinuria [].; GO: 0006506 GPI anchor biosynthetic process |
| >TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.092 Score=68.66 Aligned_cols=42 Identities=10% Similarity=0.111 Sum_probs=39.2
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
..+.+.++++|+++++. |+.+++.||-+...+..+.+++|+.
T Consensus 578 Dplr~~~~~aI~~l~~a----GI~v~miTGD~~~tA~~iA~~~GI~ 619 (941)
T TIGR01517 578 DPLRPGVREAVQECQRA----GITVRMVTGDNIDTAKAIARNCGIL 619 (941)
T ss_pred CCCchhHHHHHHHHHHC----CCEEEEECCCChHHHHHHHHHcCCC
Confidence 67788999999999997 9999999999999999999999983
|
The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others. |
| >TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.036 Score=72.17 Aligned_cols=41 Identities=10% Similarity=-0.023 Sum_probs=38.1
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|+.+++. |+.++++||.+...+..+.+++|+
T Consensus 536 Dplr~~v~e~I~~l~~a----GI~v~miTGD~~~tA~~ia~~~gi 576 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTA----GIRVIMITGDNKETAEAICRRIGI 576 (917)
T ss_pred CCCchhHHHHHHHHHHC----CCEEEEecCCCHHHHHHHHHHcCC
Confidence 45678999999999986 999999999999999999999998
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522. |
| >TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.88 E-value=0.036 Score=68.28 Aligned_cols=55 Identities=16% Similarity=0.204 Sum_probs=48.5
Q ss_pred cceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCC-eEEEEECCCCHHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGS-IGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~g-i~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.++++.||++ ...+-+..+++|+.|+++ | +.++|+||.+...+..+++++|+
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~----g~i~v~ivTgd~~~~a~~i~~~lgi 424 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRA----GGIKLVMLTGDNRSAAEAVAAELGI 424 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHc----CCCeEEEEeCCCHHHHHHHHHHhCC
Confidence 3567888999987 256788999999999987 7 99999999999999999999998
|
This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512. |
| >PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.032 Score=70.90 Aligned_cols=55 Identities=9% Similarity=0.029 Sum_probs=49.0
Q ss_pred cceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
.++.+++..|+++ ...+-+..+++|+.|++. |+.+++.||.+...+..+.+++|+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~----gi~~~llTGd~~~~a~~ia~~lgi 607 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKAL----GIKGVMLTGDNPRAAAAIAGELGI 607 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 3567888899987 367888999999999987 899999999999999999999998
|
|
| >TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.12 Score=67.06 Aligned_cols=56 Identities=7% Similarity=-0.020 Sum_probs=47.5
Q ss_pred cceEEEEEecC-----CC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 773 RKHIFVISVDC-----DS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 773 ~kkLi~~DiDG-----TL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
..|.++++++. ++ ...+-+.++++|+.+++. |+.+++.||-+...+..+.+++|+.
T Consensus 502 G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~----Gi~v~miTGD~~~tA~~ia~~~Gi~ 568 (884)
T TIGR01522 502 GLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITG----GVRIIMITGDSQETAVSIARRLGMP 568 (884)
T ss_pred CCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 35677777765 33 267788999999999986 9999999999999999999999983
|
The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116. |
| >PRK13222 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.072 Score=57.14 Aligned_cols=46 Identities=17% Similarity=0.145 Sum_probs=39.0
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEeCCCc
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~-gVAMgNa~ 1007 (1057)
.+..+++.++++++++++++++ +||+.+ | ++|.+.+|. +|.+..+.
T Consensus 150 p~~~~~~~~~~~~~~~~~~~i~-igD~~~-D-i~~a~~~g~~~i~v~~g~ 196 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPEEMLF-VGDSRN-D-IQAARAAGCPSVGVTYGY 196 (226)
T ss_pred cChHHHHHHHHHcCCChhheEE-ECCCHH-H-HHHHHHCCCcEEEECcCC
Confidence 3578999999999999999998 899988 9 999999997 56665443
|
|
| >TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490 | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.047 Score=57.62 Aligned_cols=46 Identities=22% Similarity=0.177 Sum_probs=41.3
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 956 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 956 ~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.+-.|..+++.++++.+++++++++ +||+.+ | ++|++.+|.++++.
T Consensus 152 ~g~~K~~~l~~~~~~~~~~~~~~~~-~gDs~~-D-~~~~~~a~~~~~v~ 197 (202)
T TIGR01490 152 KGEGKVHALAELLAEEQIDLKDSYA-YGDSIS-D-LPLLSLVGHPYVVN 197 (202)
T ss_pred CChHHHHHHHHHHHHcCCCHHHcEe-eeCCcc-c-HHHHHhCCCcEEeC
Confidence 3557999999999999999999999 788888 8 99999999999886
|
A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog. |
| >PLN02152 indole-3-acetate beta-glucosyltransferase | Back alignment and domain information |
|---|
Probab=95.75 E-value=6.5 Score=47.14 Aligned_cols=154 Identities=12% Similarity=0.098 Sum_probs=81.8
Q ss_pred HHHhhhCCC--CCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccc-hhhHHHHHHHHHHHHH
Q 001541 465 EIMRFFTNP--RKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMS-STSASVLLSVLKLIDK 539 (1057)
Q Consensus 465 ~~~~~~~~~--~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~-~~~~~~~~~l~~l~~~ 539 (1057)
+..+++... +..+.+++|.+. +.+-+..+..+++.+.. .+..++......+... ..............++
T Consensus 250 ~~~~wLd~~~~~sVvyvsfGS~~~l~~~q~~ela~gL~~s~~-----~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~ 324 (455)
T PLN02152 250 SYTLWLDSKTESSVIYVSFGTMVELSKKQIEELARALIEGKR-----PFLWVITDKLNREAKIEGEEETEIEKIAGFRHE 324 (455)
T ss_pred HHHHHhhCCCCCceEEEEecccccCCHHHHHHHHHHHHHcCC-----CeEEEEecCcccccccccccccccccchhHHHh
Confidence 345555332 356778888754 35567778888887731 3434555321100000 0000000001122222
Q ss_pred cCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhc-CCceEE
Q 001541 540 YDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRV-LDNGLL 614 (1057)
Q Consensus 540 ~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~-~~~Gll 614 (1057)
. .++..+.+++|+.+ +++.. .|-++-+ -+-.++++||+.+|+|+|+-...+ ....+.+ -+.|+-
T Consensus 325 ~--~~~g~v~~W~PQ~~---iL~h~----~vg~fvt--H~G~nS~~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~ 393 (455)
T PLN02152 325 L--EEVGMIVSWCSQIE---VLRHR----AVGCFVT--HCGWSSSLESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVR 393 (455)
T ss_pred c--cCCeEEEeeCCHHH---HhCCc----ccceEEe--eCCcccHHHHHHcCCCEEeccccccchHHHHHHHHHhCceEE
Confidence 2 24556678988774 55555 3322222 233468899999999999976543 1222222 134555
Q ss_pred eC-----CCCHHHHHHHHHHHHhCH
Q 001541 615 VD-----PHDQQSVADALLKLVADK 634 (1057)
Q Consensus 615 v~-----p~d~~~la~aI~~ll~d~ 634 (1057)
+. .-+.++++++|.+++.++
T Consensus 394 ~~~~~~~~~~~e~l~~av~~vm~~~ 418 (455)
T PLN02152 394 VRENSEGLVERGEIRRCLEAVMEEK 418 (455)
T ss_pred eecCcCCcCcHHHHHHHHHHHHhhh
Confidence 42 126799999999999754
|
|
| >TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.74 E-value=0.067 Score=65.87 Aligned_cols=55 Identities=11% Similarity=0.132 Sum_probs=48.8
Q ss_pred cceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
....++++.||++ ...+.+..+++|++|++. |+.++++||.+...+..+++.+|+
T Consensus 384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~----Gi~v~ilSgd~~~~a~~ia~~lgi 444 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRR----GIEPVMLTGDNRKTAKAVAKELGI 444 (562)
T ss_pred CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHc----CCeEEEEcCCCHHHHHHHHHHcCC
Confidence 3567889999988 366788999999999987 899999999999999999999987
|
One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification. |
| >TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=95.73 E-value=0.11 Score=67.36 Aligned_cols=41 Identities=15% Similarity=-0.010 Sum_probs=38.7
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+-+.++++|+++++. |+.+++.||-+...+..+.+++|+
T Consensus 514 Dp~R~~~~~aI~~l~~a----GI~vvmiTGD~~~tA~aIA~~lGI 554 (867)
T TIGR01524 514 DPPKESTKEAIAALFKN----GINVKVLTGDNEIVTARICQEVGI 554 (867)
T ss_pred CCCchhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 56788999999999997 999999999999999999999998
|
The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis. |
| >TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.15 Score=65.16 Aligned_cols=56 Identities=9% Similarity=-0.061 Sum_probs=46.4
Q ss_pred cceEEEEEe---cCCC--------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 773 RKHIFVISV---DCDS--------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 773 ~kkLi~~Di---DGTL--------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
..+.+++++ ++.| ...+-+.++++|+++++. |+.+++.||-+...+..+.+++|+.
T Consensus 416 G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI~ 482 (755)
T TIGR01647 416 GYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERARHL----GVEVKMVTGDHLAIAKETARRLGLG 482 (755)
T ss_pred CCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCCC
Confidence 345667666 3333 367888999999999997 9999999999999999999999983
|
This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast. |
| >PRK01122 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.087 Score=65.59 Aligned_cols=54 Identities=11% Similarity=0.038 Sum_probs=48.0
Q ss_pred ceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 774 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 774 kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
.+.+++..|+++ ...+.+..++++++|++. |+.++++||=+...+..+.+++|+
T Consensus 425 ~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 484 (679)
T PRK01122 425 GTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKM----GIKTVMITGDNPLTAAAIAAEAGV 484 (679)
T ss_pred CcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 456778888887 256788999999999997 999999999999999999999998
|
|
| >PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins [] | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.028 Score=56.63 Aligned_cols=50 Identities=14% Similarity=0.230 Sum_probs=40.1
Q ss_pred EEEEEecCCCCCc--------------chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHH---HHHHHHhC
Q 001541 776 IFVISVDCDSTTG--------------LLDATKKICEAVEKERTEGSIGFILSTSMTISE---IHSFLVSG 829 (1057)
Q Consensus 776 Li~~DiDGTL~~~--------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~---i~~~l~~l 829 (1057)
+|++|||||+|+. ..+...+...+++++ |..|+..|+|+... ++.||...
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~----GY~ilYlTaRp~~qa~~Tr~~L~~~ 67 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADN----GYKILYLTARPIGQANRTRSWLAQH 67 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHC----CeEEEEECcCcHHHHHHHHHHHHHH
Confidence 4899999999632 456677888888886 99999999999764 46788877
|
SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance []. |
| >TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V) | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.052 Score=71.75 Aligned_cols=41 Identities=15% Similarity=0.098 Sum_probs=38.7
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|+.+++. ||.++++||.+...+..+.+++|+
T Consensus 655 d~lr~~~~~~I~~l~~a----gi~v~miTGD~~~TA~~iA~~~gi 695 (1054)
T TIGR01657 655 NPLKPDTKEVIKELKRA----SIRTVMITGDNPLTAVHVARECGI 695 (1054)
T ss_pred cCCCccHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 56888999999999997 999999999999999999999998
|
These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in. |
| >PRK13225 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.14 Score=57.09 Aligned_cols=42 Identities=24% Similarity=0.235 Sum_probs=36.2
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
.|..++.++++++|++++++++ +||+.+ | +.+=..+|..+++
T Consensus 196 ~k~~~~~~~l~~~~~~p~~~l~-IGDs~~-D-i~aA~~AG~~~I~ 237 (273)
T PRK13225 196 SKRRALSQLVAREGWQPAAVMY-VGDETR-D-VEAARQVGLIAVA 237 (273)
T ss_pred CCHHHHHHHHHHhCcChhHEEE-ECCCHH-H-HHHHHHCCCeEEE
Confidence 4678999999999999999988 899988 9 9999989976543
|
|
| >PRK10517 magnesium-transporting ATPase MgtA; Provisional | Back alignment and domain information |
|---|
Probab=95.56 E-value=0.092 Score=68.06 Aligned_cols=41 Identities=10% Similarity=-0.052 Sum_probs=38.7
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|+++++. |+.+++.||=+...+..+.+++|+
T Consensus 549 Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~~IA~~lGI 589 (902)
T PRK10517 549 DPPKETTAPALKALKAS----GVTVKILTGDSELVAAKVCHEVGL 589 (902)
T ss_pred CcchhhHHHHHHHHHHC----CCEEEEEcCCCHHHHHHHHHHcCC
Confidence 66788999999999997 999999999999999999999998
|
|
| >PRK14986 glycogen phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.06 Score=67.16 Aligned_cols=149 Identities=12% Similarity=0.123 Sum_probs=106.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCCcccchhhHHHHHHHHHHHH----Hc
Q 001541 471 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLID----KY 540 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~-----~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~----~~ 540 (1057)
.+|+...++++-|+...|.... ++..+.++......| .+++|.|+...+... ....+...|..+++ .-
T Consensus 539 ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIk~I~~va~~in~Dp 616 (815)
T PRK14986 539 VNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAYY--MAKHIIHLINDVAKVINNDP 616 (815)
T ss_pred cCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 5677888999999999998887 666655554333332 244555544332221 23456777777777 22
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 541 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 541 ~l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
.+.+ +|.|+....-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.++|..|...|+.++ ++||++
T Consensus 617 ~v~~~lkVVFlenY~vslAe~lipg~----Dv~eqis~ag~EASGTsnMK~alNGaLtlgtlDG~nvEi~e~vG~eN~~~ 692 (815)
T PRK14986 617 QIGDKLKVVFIPNYSVSLAQLIIPAA----DLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMLEHVGEENIFI 692 (815)
T ss_pred hhcCceeEEEeCCCCHHHHHHhhhhh----hhhhhCCCCCccccCcchhhHHhcCceeeeccCCchhHHHHhcCCCcEEE
Confidence 3344 78888887666666777777 99999885 78889888999999999999999999999986 789999
Q ss_pred eCCCCHHHHHHH
Q 001541 615 VDPHDQQSVADA 626 (1057)
Q Consensus 615 v~p~d~~~la~a 626 (1057)
+- .+.+++.+-
T Consensus 693 fG-~~~~ev~~~ 703 (815)
T PRK14986 693 FG-NTAEEVEAL 703 (815)
T ss_pred eC-CCHHHHHHH
Confidence 95 366665543
|
|
| >PF12038 DUF3524: Domain of unknown function (DUF3524); InterPro: IPR022701 This domain is functionally uncharacterised and is found in bacteria and eukaryotes | Back alignment and domain information |
|---|
Probab=95.53 E-value=0.05 Score=54.86 Aligned_cols=78 Identities=14% Similarity=0.012 Sum_probs=46.6
Q ss_pred CcceEEEEcCC-CchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEe
Q 001541 305 VWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVIT 383 (1057)
Q Consensus 305 ~~pDvIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~ 383 (1057)
..+|+|.+.+. +...+..+.....++|.++.+|.....+-.. +...-...|.+.. -.+.-.||.|+.
T Consensus 58 ~~~dll~aTsmldLa~l~gL~p~l~~~p~ilYFHENQl~YP~~-------~~~~rd~~~~~~n-----i~saLaAD~v~F 125 (168)
T PF12038_consen 58 HSYDLLFATSMLDLATLRGLRPDLANVPKILYFHENQLAYPVS-------PGQERDFQYGMNN-----IYSALAADRVVF 125 (168)
T ss_pred cCCCEEEeeccccHHHHHhhccCCCCCCEEEEEecCcccCCCC-------CCccccccHHHHH-----HHHHHhceeeee
Confidence 45799999875 4444444444556899999999853322100 0011111222222 235678999999
Q ss_pred cCHHHHHHHHh
Q 001541 384 STRQEIEEQWR 394 (1057)
Q Consensus 384 ~S~~~~~~~~~ 394 (1057)
+|....+.+..
T Consensus 126 NS~~nr~sFL~ 136 (168)
T PF12038_consen 126 NSAFNRDSFLD 136 (168)
T ss_pred cchhhHHHHHH
Confidence 99877776554
|
It is about 170 amino acids in length and is found associated with PF00534 from PFAM. Two conserved sequence motifs are found within this entry: HENQ and FNS. There is also a single completely conserved residue S that may be functionally important. |
| >TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type | Back alignment and domain information |
|---|
Probab=95.52 E-value=0.057 Score=71.02 Aligned_cols=41 Identities=7% Similarity=-0.026 Sum_probs=38.4
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.++++|+.+++. ||.+++.||.....+..+.+++|+
T Consensus 645 Dp~r~~v~~aI~~l~~a----GIkv~MiTGD~~~tA~~iA~~~Gi 685 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQA----GINVHMLTGDFPETAKAIAQEVGI 685 (1053)
T ss_pred cCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHcCC
Confidence 55778999999999997 999999999999999999999998
|
The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump. |
| >TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459 | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.023 Score=62.08 Aligned_cols=67 Identities=7% Similarity=0.012 Sum_probs=49.8
Q ss_pred CcceEEEEEecCCCC--CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCH--HHHHHHHHhCCCCCCCCCeEEeC
Q 001541 772 RRKHIFVISVDCDST--TGLLDATKKICEAVEKERTEGSIGFILSTSMTI--SEIHSFLVSGHLSPSDFDAFICN 842 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~--~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~--~~i~~~l~~lgl~~~~~D~lI~~ 842 (1057)
.+.++++||+||||. ..+.+.+.++|++|+++ |+.++|+|.-+. ..+.+.++.+|+....++.++++
T Consensus 6 ~~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~----G~~~~ivTN~~~~~~~~~~~L~~~gl~~~~~~~Ii~s 76 (242)
T TIGR01459 6 NDYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQ----GKPVYFVSNSPRNIFSLHKTLKSLGINADLPEMIISS 76 (242)
T ss_pred hcCCEEEEecccccccCCccCccHHHHHHHHHHC----CCEEEEEeCCCCChHHHHHHHHHCCCCccccceEEcc
Confidence 346789999999993 55678999999999987 898989765444 34447899999952145655553
|
This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily) |
| >PRK11590 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.48 E-value=0.064 Score=57.37 Aligned_cols=44 Identities=16% Similarity=0.028 Sum_probs=33.9
Q ss_pred cCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 955 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 955 p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
..|..|...|+.++ |.+.+..++ -||+.+ | ++||+.|++++++.
T Consensus 159 c~g~~K~~~l~~~~---~~~~~~~~a-Y~Ds~~-D-~pmL~~a~~~~~vn 202 (211)
T PRK11590 159 CLGHEKVAQLERKI---GTPLRLYSG-YSDSKQ-D-NPLLYFCQHRWRVT 202 (211)
T ss_pred CCChHHHHHHHHHh---CCCcceEEE-ecCCcc-c-HHHHHhCCCCEEEC
Confidence 45556776666554 667777777 788888 8 99999999999985
|
|
| >PRK13226 phosphoglycolate phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.044 Score=59.34 Aligned_cols=40 Identities=20% Similarity=0.123 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
+...+.++++++|++++++++ +||+.+ | +.+-+.+|..++
T Consensus 153 ~p~~~~~~~~~l~~~p~~~l~-IGDs~~-D-i~aA~~aG~~~i 192 (229)
T PRK13226 153 HPLPLLVAAERIGVAPTDCVY-VGDDER-D-ILAARAAGMPSV 192 (229)
T ss_pred CHHHHHHHHHHhCCChhhEEE-eCCCHH-H-HHHHHHCCCcEE
Confidence 456799999999999999998 888888 8 999999997654
|
|
| >PRK15122 magnesium-transporting ATPase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.16 Score=65.96 Aligned_cols=41 Identities=7% Similarity=-0.048 Sum_probs=38.8
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+-+.++++|+++++. ||.+++.||=+...+..+.+++|+
T Consensus 549 Dp~R~~a~~aI~~l~~a----GI~v~miTGD~~~tA~aIA~~lGI 589 (903)
T PRK15122 549 DPPKESAAPAIAALREN----GVAVKVLTGDNPIVTAKICREVGL 589 (903)
T ss_pred CccHHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 66788999999999997 999999999999999999999998
|
|
| >PRK14985 maltodextrin phosphorylase; Provisional | Back alignment and domain information |
|---|
Probab=95.27 E-value=0.15 Score=63.65 Aligned_cols=140 Identities=16% Similarity=0.183 Sum_probs=100.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCCcccchhhHHHHHHHHHHHHHcC---
Q 001541 471 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD--- 541 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~-----~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~--- 541 (1057)
.+|+...++++-|+...|.... ++....++......| ..++|.|+...+... ....+...|+.+++..+
T Consensus 525 ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 602 (798)
T PRK14985 525 INPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYY--LAKNIIFAINKVAEVINNDP 602 (798)
T ss_pred cCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCcH--HHHHHHHHHHHHHHHhcCCh
Confidence 5677788999999999998777 666655554333332 245555544332221 12445666777765542
Q ss_pred -CCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 542 -LYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 542 -l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
..+ +|.|+....-+-...++.+| ||-.+.|. .|..|..=+=+|.-|.+.++|-.|...|+.+. ++||++
T Consensus 603 ~v~~~lkVVFlenY~VslAe~lipaa----Dvseqis~ag~EASGTsnMK~amNGaLtlgtlDGanvEi~e~vG~eN~f~ 678 (798)
T PRK14985 603 LVGDKLKVVFLPDYCVSAAELLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEQVGEENIFI 678 (798)
T ss_pred hhCCceeEEEeCCCChHHHHHHhhhh----hhhhhCCCCCccccCcchhHHHhcCceeeecccchHHHHHHHhCcCcEEE
Confidence 334 78898887666667777777 99999885 78888888899999999999999999999875 678988
Q ss_pred eC
Q 001541 615 VD 616 (1057)
Q Consensus 615 v~ 616 (1057)
+-
T Consensus 679 fG 680 (798)
T PRK14985 679 FG 680 (798)
T ss_pred eC
Confidence 83
|
|
| >TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.024 Score=61.71 Aligned_cols=64 Identities=13% Similarity=0.093 Sum_probs=50.7
Q ss_pred EEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEEC---CCCHHHHHHHHHh-CCCCCCCCCeEEeCCCc
Q 001541 777 FVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVS-GHLSPSDFDAFICNSGS 845 (1057)
Q Consensus 777 i~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIaT---GR~~~~i~~~l~~-lgl~~~~~D~lI~~nGa 845 (1057)
++||+|||| ...+.+.+.++|+.++++ |+.+++.| ||+...+.+.|.+ +|++. .++-+|++..+
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~----g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~-~~~~iits~~~ 70 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAK----GKPVVFLTNNSSRSEEDYAEKLSSLLGVDV-SPDQIITSGSV 70 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHC----CCeEEEEECCCCCCHHHHHHHHHHhcCCCC-CHHHeeeHHHH
Confidence 579999999 344455889999999986 78888887 9999999999988 78753 46667776443
|
Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant. |
| >PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.37 Score=59.57 Aligned_cols=140 Identities=12% Similarity=0.165 Sum_probs=85.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HH---HHHHhccccc--CCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHc----
Q 001541 471 TNPRKPVILALARPDPKKNITT-LV---KAFGECRPLR--ELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 540 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll---~A~~~l~~~~--~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~---- 540 (1057)
.+|+...++++-|+...|.... ++ .-+.+++... ....+++|.|+...+... ...++...|..+++..
T Consensus 440 ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~~p~~~~~Pv~~IFaGKAhP~d~--~gK~iIk~I~~va~~in~Dp 517 (713)
T PF00343_consen 440 LDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKNNPNKKIRPVQFIFAGKAHPGDY--MGKEIIKLINNVAEVINNDP 517 (713)
T ss_dssp --TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHHSTTSCCS-EEEEEE----TT-H--HHHHHHHHHHHHHHHHCT-T
T ss_pred CCcchhhhhhhhhcccccccCcccccHHHHHHHHHhcccCCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHHhcCh
Confidence 4677788999999999998776 33 4444554321 112345555544333221 1234556666665532
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 541 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 541 ~l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
.+.+ +|.|+...+-.-...++..| ||-++.|. .|..|..-+=+|.-|.+.++|..|...|+.+. .+|.++
T Consensus 518 ~v~~~lkVvFlenYdvslA~~lipg~----DVwln~p~~p~EASGTSgMK~~~NGaL~lstlDG~niEi~e~vG~eN~fi 593 (713)
T PF00343_consen 518 EVGDRLKVVFLENYDVSLAEKLIPGV----DVWLNIPTRPKEASGTSGMKAAMNGALNLSTLDGWNIEIAEAVGEENIFI 593 (713)
T ss_dssp TTCCGEEEEEETT-SHHHHHHHGGG-----SEEEE---TTSSSS-SHHHHHHHTT-EEEEESSTCHHHHHHHH-GGGSEE
T ss_pred hhccceeEEeecCCcHHHHHHHhhhh----hhhhhCCCCCccccCCCcchhhcCCCeEEecccchhHHHHHhcCCCcEEE
Confidence 3334 68888877655566666777 99999985 79999999999999999999999999999864 357777
Q ss_pred eC
Q 001541 615 VD 616 (1057)
Q Consensus 615 v~ 616 (1057)
+-
T Consensus 594 FG 595 (713)
T PF00343_consen 594 FG 595 (713)
T ss_dssp ES
T ss_pred cC
Confidence 73
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B .... |
| >cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases | Back alignment and domain information |
|---|
Probab=95.00 E-value=0.14 Score=64.15 Aligned_cols=148 Identities=15% Similarity=0.136 Sum_probs=105.9
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCCcccchhhHHHHHHHHHHHHHc----
Q 001541 471 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 540 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~-----~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~---- 540 (1057)
.+|+...++++-|+...|.... ++..+.++.+....| ..++|.|+...+... ....+...|..+++..
T Consensus 526 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~in~Dp 603 (797)
T cd04300 526 VDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY--MAKLIIKLINAVADVVNNDP 603 (797)
T ss_pred cCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 4678889999999999998877 666554443333332 245555554433222 1245666777777642
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 541 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 541 ~l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
.+.+ +|.|+....-+-...++.+| ||-.+.|. .|..|..=+=+|.-|.+.++|..|...|+.+. .+|+++
T Consensus 604 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqis~ag~EASGTsnMK~~lNGaltlgtlDGanvEi~e~vG~eN~fi 679 (797)
T cd04300 604 DVGDKLKVVFLPNYNVSLAEKIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIAEEVGEENIFI 679 (797)
T ss_pred hcCCceEEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCCchhhHHhcCceeeecccchhHHHHHHhCcCcEEE
Confidence 3344 78898887666666777777 99999885 68888888889999999999999999999987 789999
Q ss_pred eCCCCHHHHHH
Q 001541 615 VDPHDQQSVAD 625 (1057)
Q Consensus 615 v~p~d~~~la~ 625 (1057)
|- .+.+++.+
T Consensus 680 FG-~~~~ev~~ 689 (797)
T cd04300 680 FG-LTAEEVEA 689 (797)
T ss_pred eC-CCHHHHHH
Confidence 95 35555543
|
It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility. |
| >COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.11 Score=64.95 Aligned_cols=52 Identities=13% Similarity=0.123 Sum_probs=48.1
Q ss_pred EEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 776 IFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 776 Li~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
++++.+||.+ ...+-+..+++|++|++. |+.+++.||=+...++.+.+++|+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~----Gi~~~mLTGDn~~~A~~iA~~lGI 576 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKAL----GIKVVMLTGDNRRTAEAIAKELGI 576 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCh
Confidence 7999999977 367889999999999997 999999999999999999999998
|
|
| >TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.2 Score=51.86 Aligned_cols=41 Identities=10% Similarity=0.067 Sum_probs=32.0
Q ss_pred ecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE
Q 001541 954 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT 1000 (1057)
Q Consensus 954 ~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~g 1000 (1057)
.+.|..|+..++.+...+ .+++++ +||+.+ | ++|.+.++.-
T Consensus 144 ~~~g~~K~~~~~~~~~~~---~~~~i~-iGD~~~-D-~~aa~~~d~~ 184 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK---YQHIIY-IGDGVT-D-VCPAKLSDVV 184 (188)
T ss_pred CCCCCCHHHHHHHHHhhc---CceEEE-ECCCcc-h-hchHhcCCcc
Confidence 356778999999998875 566666 899999 9 9888877543
|
Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact. |
| >PRK14010 potassium-transporting ATPase subunit B; Provisional | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.18 Score=62.83 Aligned_cols=53 Identities=9% Similarity=0.046 Sum_probs=45.2
Q ss_pred eEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 775 HIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 775 kLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+.+++..|+++ ...+.+..++++++|++. |+.+++.||-+...+..+.+++|+
T Consensus 422 ~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~----GI~vvMiTGDn~~TA~aIA~elGI 480 (673)
T PRK14010 422 TPLVVLEDNEILGVIYLKDVIKDGLVERFRELREM----GIETVMCTGDNELTAATIAKEAGV 480 (673)
T ss_pred eEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHC----CCeEEEECCCCHHHHHHHHHHcCC
Confidence 34455557776 256788999999999987 999999999999999999999998
|
|
| >TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672 | Back alignment and domain information |
|---|
Probab=94.75 E-value=0.076 Score=57.68 Aligned_cols=36 Identities=8% Similarity=0.143 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhhcCCCeEEEEECCC----CHHHHHHHHHhCCCC
Q 001541 793 TKKICEAVEKERTEGSIGFILSTSM----TISEIHSFLVSGHLS 832 (1057)
Q Consensus 793 t~~al~~l~~~~~~~gi~~vIaTGR----~~~~i~~~l~~lgl~ 832 (1057)
.++.|+.++++ |+.++|+|+| .-..+..+++.+|++
T Consensus 119 a~elL~~l~~~----G~~i~iVTnr~~~k~~~~a~~ll~~lGi~ 158 (237)
T TIGR01672 119 ARQLIDMHQRR----GDAIFFVTGRTPGKTDTVSKTLAKNFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCEEEEEeCCCCCcCHHHHHHHHHHhCCc
Confidence 67788888886 8999999999 556788888889994
|
Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion. |
| >COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.15 Score=66.19 Aligned_cols=42 Identities=10% Similarity=0.060 Sum_probs=38.8
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
..+.+.++++|+.++++ ||.+.++||=....+..+.+++|+.
T Consensus 546 Dppr~~v~~aI~~l~~A----GI~v~MiTGD~~~TA~aIa~~~Gi~ 587 (917)
T COG0474 546 DPPREDVKEAIEELREA----GIKVWMITGDHVETAIAIAKECGIE 587 (917)
T ss_pred CCCCccHHHHHHHHHHC----CCcEEEECCCCHHHHHHHHHHcCCC
Confidence 55778999999999997 9999999999999999999999984
|
|
| >TIGR01675 plant-AP plant acid phosphatase | Back alignment and domain information |
|---|
Probab=94.66 E-value=0.094 Score=56.40 Aligned_cols=56 Identities=13% Similarity=0.089 Sum_probs=45.1
Q ss_pred cceEEEEEecCCCC-----------------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHH--
Q 001541 773 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISE-- 821 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~-----------------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~-- 821 (1057)
.+-+++||||-|+. ....+.++++++.++++ |+.|+++|||+...
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~----G~~Vf~lTGR~e~~r~ 151 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIEL----GIKIFLLSGRWEELRN 151 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHC----CCEEEEEcCCChHHHH
Confidence 45689999999971 22335778899999886 99999999999766
Q ss_pred -HHHHHHhCCCC
Q 001541 822 -IHSFLVSGHLS 832 (1057)
Q Consensus 822 -i~~~l~~lgl~ 832 (1057)
+.+.|...|++
T Consensus 152 ~T~~nL~~~G~~ 163 (229)
T TIGR01675 152 ATLDNLINAGFT 163 (229)
T ss_pred HHHHHHHHcCCC
Confidence 77889999983
|
This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases. |
| >TIGR01685 MDP-1 magnesium-dependent phosphatase-1 | Back alignment and domain information |
|---|
Probab=94.64 E-value=0.069 Score=55.21 Aligned_cols=53 Identities=8% Similarity=0.086 Sum_probs=44.9
Q ss_pred eEEEEEecCCC-C----------------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCC-CHHHHHH
Q 001541 775 HIFVISVDCDS-T----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHS 824 (1057)
Q Consensus 775 kLi~~DiDGTL-~----------------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR-~~~~i~~ 824 (1057)
||+|||+|+|+ + ..+-+.+.++|+.|+++ |+.++|+|+. +...+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~----G~~l~I~Sn~~~~~~~~~ 78 (174)
T TIGR01685 3 RVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDA----GTYLATASWNDVPEWAYE 78 (174)
T ss_pred cEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHC----CCEEEEEeCCCChHHHHH
Confidence 69999999999 1 12446789999999986 8999999988 8888889
Q ss_pred HHHhCCC
Q 001541 825 FLVSGHL 831 (1057)
Q Consensus 825 ~l~~lgl 831 (1057)
+++.+++
T Consensus 79 ~L~~~~l 85 (174)
T TIGR01685 79 ILGTFEI 85 (174)
T ss_pred HHHhCCc
Confidence 9999887
|
This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues. |
| >PRK14089 ipid-A-disaccharide synthase; Provisional | Back alignment and domain information |
|---|
Probab=94.61 E-value=1.2 Score=51.36 Aligned_cols=79 Identities=14% Similarity=0.054 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCCCCCCCcHHHHHHHhhc
Q 001541 487 KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 566 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g~v~~~dl~~ly~~Aa~ 566 (1057)
.+.++.+++|+.++.+. . +.+++-..+. .+.+.....+. ..+.+.+ +..++|+.|
T Consensus 182 ~~llP~~~~aa~~L~~~--~--~~~~i~~a~~-----------~~~i~~~~~~~---~~~~~~~-----~~~~~m~~a-- 236 (347)
T PRK14089 182 KRLMPIFKELAKKLEGK--E--KILVVPSFFK-----------GKDLKEIYGDI---SEFEISY-----DTHKALLEA-- 236 (347)
T ss_pred HHHHHHHHHHHHHHhhc--C--cEEEEeCCCc-----------HHHHHHHHhcC---CCcEEec-----cHHHHHHhh--
Confidence 35667788999888642 2 3343333222 12333333322 2333332 567899999
Q ss_pred CCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc
Q 001541 567 TKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 597 (1057)
Q Consensus 567 ~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat 597 (1057)
|++|..| |.+.+|++.+|+|+|..
T Consensus 237 --Dlal~~S-----GT~TLE~al~g~P~Vv~ 260 (347)
T PRK14089 237 --EFAFICS-----GTATLEAALIGTPFVLA 260 (347)
T ss_pred --hHHHhcC-----cHHHHHHHHhCCCEEEE
Confidence 9999887 88888999999998874
|
|
| >TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase | Back alignment and domain information |
|---|
Probab=94.59 E-value=0.14 Score=62.87 Aligned_cols=53 Identities=8% Similarity=-0.019 Sum_probs=46.1
Q ss_pred eEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCe-EEEEECCCCHHHHHHHHHhCCC
Q 001541 775 HIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSI-GFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 775 kLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi-~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+++..|+++ ...+-+..+++|+.|++. |+ .++++||.+...+..+++++|+
T Consensus 343 ~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~----Gi~~v~vvTgd~~~~a~~i~~~lgi 402 (536)
T TIGR01512 343 TIVHVARDGTYLGYILLSDEPRPDAAEAIAELKAL----GIEKVVMLTGDRRAVAERVARELGI 402 (536)
T ss_pred eEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHc----CCCcEEEEcCCCHHHHHHHHHHcCC
Confidence 45677778877 256778999999999987 89 9999999999999999999987
|
. |
| >TIGR01261 hisB_Nterm histidinol-phosphatase | Back alignment and domain information |
|---|
Probab=94.49 E-value=0.075 Score=54.32 Aligned_cols=60 Identities=15% Similarity=0.190 Sum_probs=45.2
Q ss_pred ceEEEEEecCCCCCc--------------chHHHHHHHHHHHhhhcCCCeEEEEECCC---------------CHHHHHH
Q 001541 774 KHIFVISVDCDSTTG--------------LLDATKKICEAVEKERTEGSIGFILSTSM---------------TISEIHS 824 (1057)
Q Consensus 774 kkLi~~DiDGTL~~~--------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR---------------~~~~i~~ 824 (1057)
+|+++||.||||... +-+.+.++|+.|+++ |+.++|+|-- +...+..
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~IvSN~~g~~~~~~~~~~~~~~~~~~~~ 76 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKA----GYKFVMVTNQDGLGTPSFPQADFDGPHNLMLQ 76 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHC----CCeEEEEeCCccccCCcCCHHHHHHHHHHHHH
Confidence 478999999999532 225688999999986 8888888864 3456778
Q ss_pred HHHhCCCCCCCCCeEE
Q 001541 825 FLVSGHLSPSDFDAFI 840 (1057)
Q Consensus 825 ~l~~lgl~~~~~D~lI 840 (1057)
+++.+|+. ||.++
T Consensus 77 ~l~~~gl~---fd~ii 89 (161)
T TIGR01261 77 IFRSQGII---FDDVL 89 (161)
T ss_pred HHHHCCCc---eeEEE
Confidence 89999983 55443
|
This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis. |
| >TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase | Back alignment and domain information |
|---|
Probab=94.44 E-value=0.074 Score=64.19 Aligned_cols=67 Identities=12% Similarity=0.193 Sum_probs=51.8
Q ss_pred ccCcceEEEEEecCCCCCc---------------chHHHHHHHHHHHhhhcCCCeEEEEECCCCH------------HHH
Q 001541 770 LRRRKHIFVISVDCDSTTG---------------LLDATKKICEAVEKERTEGSIGFILSTSMTI------------SEI 822 (1057)
Q Consensus 770 ~~~~kkLi~~DiDGTL~~~---------------i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~------------~~i 822 (1057)
...+.|+++||+||||... +-+.+.++|+.|+++ |+.++|+|.-+- ..+
T Consensus 164 ~~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~----Gy~IvIvTNQ~gI~~G~~~~~~~~~ki 239 (526)
T TIGR01663 164 VKGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEAD----GFKICIFTNQGGIARGKINADDFKAKI 239 (526)
T ss_pred cCccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHC----CCEEEEEECCcccccCcccHHHHHHHH
Confidence 3456799999999999421 246788999999987 899999997544 347
Q ss_pred HHHHHhCCCCCCCCCeEEeCC
Q 001541 823 HSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 823 ~~~l~~lgl~~~~~D~lI~~n 843 (1057)
..+++.+|++ ++.++|..
T Consensus 240 ~~iL~~lgip---fdviia~~ 257 (526)
T TIGR01663 240 EAIVAKLGVP---FQVFIAIG 257 (526)
T ss_pred HHHHHHcCCc---eEEEEeCC
Confidence 7889999985 67777754
|
Note that the EC number for the kinase function is: 2.7.1.78 |
| >PRK10826 2-deoxyglucose-6-phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=94.42 E-value=0.33 Score=52.15 Aligned_cols=43 Identities=12% Similarity=0.029 Sum_probs=37.3
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.+...++.+++++|++++++++ +||+.+ | +++-+.+|..++.-
T Consensus 149 p~~~~~~~~~~~~~~~~~~~~~-igDs~~-D-i~aA~~aG~~~i~v 191 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPLTCVA-LEDSFN-G-MIAAKAARMRSIVV 191 (222)
T ss_pred CCHHHHHHHHHHcCCCHHHeEE-EcCChh-h-HHHHHHcCCEEEEe
Confidence 4567999999999999999998 899998 9 99999999776553
|
|
| >TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain | Back alignment and domain information |
|---|
Probab=94.40 E-value=0.067 Score=53.70 Aligned_cols=53 Identities=9% Similarity=0.033 Sum_probs=41.7
Q ss_pred eEEEEEecCCCC--C-----------cchHHHHHHHHHHHhhhcCCCeEEEEECCCC---------------HHHHHHHH
Q 001541 775 HIFVISVDCDST--T-----------GLLDATKKICEAVEKERTEGSIGFILSTSMT---------------ISEIHSFL 826 (1057)
Q Consensus 775 kLi~~DiDGTL~--~-----------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~---------------~~~i~~~l 826 (1057)
++++||+||||+ . .+-+.+.++|+.|+++ |+.++|+|..+ ...+...+
T Consensus 1 ~~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~----g~~~~I~Sn~~~~~~~~~~~~~~~~~~~~~~~~l 76 (147)
T TIGR01656 1 PALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAA----GYTVVVVTNQSGIGRGYFSAEAFRAPNGRVLELL 76 (147)
T ss_pred CeEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHC----CCEEEEEeCCCcccCCcCCHHHHHHHHHHHHHHH
Confidence 478999999994 1 2356788999999987 89999999865 24567778
Q ss_pred HhCCC
Q 001541 827 VSGHL 831 (1057)
Q Consensus 827 ~~lgl 831 (1057)
+.+++
T Consensus 77 ~~~~l 81 (147)
T TIGR01656 77 RQLGV 81 (147)
T ss_pred HhCCC
Confidence 88887
|
This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3. |
| >PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria | Back alignment and domain information |
|---|
Probab=94.21 E-value=0.54 Score=54.68 Aligned_cols=110 Identities=11% Similarity=0.167 Sum_probs=65.5
Q ss_pred CCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEc--CC-------CCchhhhhcCCc
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT--KN-------GGPVDIHRVLDN 611 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat--~~-------Gg~~eiv~~~~~ 611 (1057)
...++|.+... ..++.+++..| |++|- -++-+++|++.+++|||-. +. |...++ .....
T Consensus 249 ~~~~~i~~~~~--~~~~~~ll~~a----DiLIT-----DySSi~fD~~~l~KPiify~~D~~~Y~~~rg~~~~~-~~~~p 316 (369)
T PF04464_consen 249 EDNSNIIFVSD--NEDIYDLLAAA----DILIT-----DYSSIIFDFLLLNKPIIFYQPDLEEYEKERGFYFDY-EEDLP 316 (369)
T ss_dssp T-TTTEEE-TT---S-HHHHHHT-----SEEEE-----SS-THHHHHGGGT--EEEE-TTTTTTTTTSSBSS-T-TTSSS
T ss_pred ccCCcEEECCC--CCCHHHHHHhc----CEEEE-----echhHHHHHHHhCCCEEEEeccHHHHhhccCCCCch-HhhCC
Confidence 34467777665 35899999999 99772 3677999999999999963 22 333332 23345
Q ss_pred eEEeCCCCHHHHHHHHHHHHhCHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHH
Q 001541 612 GLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRI 664 (1057)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll~d~~~~~~~~~~~~~~v~~fsw~~~a~~~l~~~ 664 (1057)
|.++. +.++|.++|..++.++....+.++...+....|.=...+++..+.+
T Consensus 317 g~~~~--~~~eL~~~i~~~~~~~~~~~~~~~~~~~~~~~~~Dg~s~eri~~~I 367 (369)
T PF04464_consen 317 GPIVY--NFEELIEAIENIIENPDEYKEKREKFRDKFFKYNDGNSSERIVNYI 367 (369)
T ss_dssp S-EES--SHHHHHHHHTTHHHHHHHTHHHHHHHHHHHSTT--S-HHHHHHHHH
T ss_pred CceeC--CHHHHHHHHHhhhhCCHHHHHHHHHHHHHhCCCCCchHHHHHHHHH
Confidence 66775 8999999999999877665554444444443344445566665554
|
They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D. |
| >PHA02530 pseT polynucleotide kinase; Provisional | Back alignment and domain information |
|---|
Probab=94.20 E-value=0.059 Score=60.81 Aligned_cols=57 Identities=4% Similarity=-0.085 Sum_probs=48.3
Q ss_pred CcceEEEEEecCCCCC---------------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 772 RRKHIFVISVDCDSTT---------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~~---------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
.+.+++++|+|||+.. .+.+.+.++|+.|+++ |+.++|+|||+.......++.+++.
T Consensus 156 ~~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~----g~~i~i~T~r~~~~~~~~l~~l~~~ 227 (300)
T PHA02530 156 GLPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAA----GYEIIVVSGRDGVCEEDTVEWLRQT 227 (300)
T ss_pred CCCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhC----CCEEEEEeCCChhhHHHHHHHHHHc
Confidence 3457999999999941 3567899999999886 8999999999999999988888773
|
|
| >KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=94.04 E-value=0.4 Score=59.11 Aligned_cols=164 Identities=15% Similarity=0.069 Sum_probs=94.8
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcEEEeccCCCCCCCccccccchhhcc
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIE 870 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~I~~~~~~~~~~~~~~d~~~~~~i~ 870 (1057)
..+-+|+.+.++. ||+++..||+.+..+..+.++.|+ |.. |+++.
T Consensus 593 ~~vP~Av~~CrsA----GIkvimVTgdhpiTAkAiA~~vgI--------i~~-~~et~---------------------- 637 (1019)
T KOG0203|consen 593 AAVPDAVGKCRSA----GIKVIMVTGDHPITAKAIAKSVGI--------ISE-GSETV---------------------- 637 (1019)
T ss_pred ccCchhhhhhhhh----CceEEEEecCccchhhhhhhheee--------ecC-Cchhh----------------------
Confidence 3455788888887 999999999999999999998875 322 22221
Q ss_pred cccchhhHHHHHHHhhhcccccccccccccccccccccCcceEEEEecCCCCCccHHHHHHHHHHhcCcEEEEEeeCCee
Q 001541 871 YRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR 950 (1057)
Q Consensus 871 ~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~el~~~l~~~~~~~~v~~s~~~~~ 950 (1057)
+....+......+. .....+........-....-+++.+.+..+ ...-+.++.+...
T Consensus 638 --------e~~a~r~~~~v~~v--------------n~~~a~a~VihG~eL~~~~~~qld~il~nh-~eIVFARTSPqQK 694 (1019)
T KOG0203|consen 638 --------EDIAKRLNIPVEQV--------------NSRDAKAAVIHGSELPDMSSEQLDELLQNH-QEIVFARTSPQQK 694 (1019)
T ss_pred --------hhhHHhcCCccccc--------------CccccceEEEecccccccCHHHHHHHHHhC-CceEEEecCccce
Confidence 11111111100000 000111111111111112234666666543 2344455555434
Q ss_pred EEEecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCchhhhhhhhhcCCCCCCCCCcCCC
Q 001541 951 INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDS 1030 (1057)
Q Consensus 951 lEI~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~~~~~~~~~a~~~~~~~~~~~~~~ 1030 (1057)
|=|+- + |++.| ++|+..||+-| | -+-|+.|+.|||||=|. +..-++|++ ++=+|.
T Consensus 695 LiIVe-~----------cQr~G----aiVaVTGDGVN-D-sPALKKADIGVAMGiaG--SDvsKqAAD------mILLDD 749 (1019)
T KOG0203|consen 695 LIIVE-G----------CQRQG----AIVAVTGDGVN-D-SPALKKADIGVAMGIAG--SDVSKQAAD------MILLDD 749 (1019)
T ss_pred EEeEh-h----------hhhcC----cEEEEeCCCcC-C-Chhhcccccceeecccc--chHHHhhcc------eEEecC
Confidence 54442 2 56665 48888999999 9 99999999999999776 555566665 444555
Q ss_pred CCeEEcc
Q 001541 1031 PNIVQTP 1037 (1057)
Q Consensus 1031 ~~~~~vt 1037 (1057)
.-+..||
T Consensus 750 NFASIVt 756 (1019)
T KOG0203|consen 750 NFASIVT 756 (1019)
T ss_pred cchhhee
Confidence 5556664
|
|
| >PRK13288 pyrophosphatase PpaX; Provisional | Back alignment and domain information |
|---|
Probab=94.01 E-value=0.31 Score=51.96 Aligned_cols=45 Identities=9% Similarity=0.008 Sum_probs=38.1
Q ss_pred cCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 955 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 955 p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
...-.|...++++++++|++++++++ +||+.+ | +.+-..+|..++
T Consensus 135 ~~~Kp~p~~~~~~~~~~~~~~~~~~~-iGDs~~-D-i~aa~~aG~~~i 179 (214)
T PRK13288 135 EHAKPDPEPVLKALELLGAKPEEALM-VGDNHH-D-ILAGKNAGTKTA 179 (214)
T ss_pred CCCCCCcHHHHHHHHHcCCCHHHEEE-ECCCHH-H-HHHHHHCCCeEE
Confidence 33445788999999999999999998 999988 9 999999997654
|
|
| >PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.12 Score=53.65 Aligned_cols=41 Identities=5% Similarity=0.026 Sum_probs=33.4
Q ss_pred ceEEEEEecCCCC------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC
Q 001541 774 KHIFVISVDCDST------------TGLLDATKKICEAVEKERTEGSIGFILSTSMT 818 (1057)
Q Consensus 774 kkLi~~DiDGTL~------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~ 818 (1057)
.|+++||.||||. -.+-+.+.++|++|+++ |+.++|+|..+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQA----GYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 5899999999992 12345678999999986 89999999875
|
|
| >TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.13 Score=53.34 Aligned_cols=40 Identities=13% Similarity=0.211 Sum_probs=32.8
Q ss_pred eEEEEEecCCCCC-----------cchHHHHHHHHHHHhhhcCCCeEEEEECCCC
Q 001541 775 HIFVISVDCDSTT-----------GLLDATKKICEAVEKERTEGSIGFILSTSMT 818 (1057)
Q Consensus 775 kLi~~DiDGTL~~-----------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~ 818 (1057)
|++|+|.||||.. .+-+.+.++|+.|+++ |+.++|+|.-+
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~i~TN~~ 52 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKM----GYALVLVTNQS 52 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEeCCc
Confidence 7899999999951 1235689999999986 89999999765
|
This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812). |
| >TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases | Back alignment and domain information |
|---|
Probab=93.87 E-value=0.17 Score=63.15 Aligned_cols=149 Identities=13% Similarity=0.107 Sum_probs=105.4
Q ss_pred CCCCCcEEEEEeCCCCCCCHHH-HHHHHHhcccccCCC-----cEEEEEecCCCCcccchhhHHHHHHHHHHHHHc----
Q 001541 471 TNPRKPVILALARPDPKKNITT-LVKAFGECRPLRELA-----NLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKY---- 540 (1057)
Q Consensus 471 ~~~~~~~Il~vGRl~~~Kgi~~-Ll~A~~~l~~~~~~~-----~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~---- 540 (1057)
.+|+...++++-|+...|.... ++..+..+......| ..++|.|+...+... ....+...|..+++..
T Consensus 523 ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~--~aK~iIklI~~va~~iN~Dp 600 (794)
T TIGR02093 523 VDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGYH--MAKLIIKLINSVAEVVNNDP 600 (794)
T ss_pred cCccccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCcH--HHHHHHHHHHHHHHHhccCh
Confidence 5577888999999999998777 666655544333332 234555444332221 1244566677666442
Q ss_pred CCCC--CEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCC--CCCCCHHHHHHHHcCCcEEEcCCCCchhhhhc--CCceEE
Q 001541 541 DLYG--QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLL 614 (1057)
Q Consensus 541 ~l~~--~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~--~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~--~~~Gll 614 (1057)
...+ +|.|+....-+--..++.+| ||-.+.|. .|..|..=+=+|.-|.+.|+|..|...|+.++ .+|+++
T Consensus 601 ~v~~~lkVVFlenY~VslAe~iipaa----Dvseqistag~EASGTsnMK~alNGaltlgtlDGanvEi~e~vG~eN~fi 676 (794)
T TIGR02093 601 AVGDKLKVVFVPNYNVSLAELIIPAA----DLSEQISTAGKEASGTGNMKFMLNGALTIGTLDGANVEIREEVGAENIFI 676 (794)
T ss_pred hhCCceeEEEeCCCChHHHHHhhhhh----hhhhhCCCCCccccCcchhHHHhcCcceeecccchhHHHHHHhCcccEEE
Confidence 2344 78898887666667777778 99999885 68888888889999999999999999999987 789999
Q ss_pred eCCCCHHHHHHH
Q 001541 615 VDPHDQQSVADA 626 (1057)
Q Consensus 615 v~p~d~~~la~a 626 (1057)
|- .+.+++.+.
T Consensus 677 FG-~~~~ev~~~ 687 (794)
T TIGR02093 677 FG-LTVEEVEAL 687 (794)
T ss_pred cC-CCHHHHHHH
Confidence 94 466665543
|
This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources. |
| >COG4370 Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Probab=93.81 E-value=1.3 Score=48.77 Aligned_cols=143 Identities=20% Similarity=0.246 Sum_probs=85.3
Q ss_pred CCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCCCEEeCC------CCCCCcH
Q 001541 484 PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPK------HHKQSDV 557 (1057)
Q Consensus 484 l~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~~V~f~g------~v~~~dl 557 (1057)
++...|+..++.++..+..... .+++...-.+..+ ...+..+.++-+|.+.-...+ ++++...
T Consensus 237 pea~~nl~~il~slcal~~~~a--~vvfw~ai~~~lp---------l~~l~~l~e~~gWq~~ad~~~kdnc~l~lsqqsf 305 (412)
T COG4370 237 PEAQTNLAVILGSLCALPAMFA--LVVFWAAIAPELP---------LLLLWTLEERQGWQPLADRFGKDNCSLWLSQQSF 305 (412)
T ss_pred hHHHhhHHHHHHHHhhhHHHHH--HHHHHhccCcCCC---------HHHHHHHHHhcCcchhhhhhccCceEEEEeHHHH
Confidence 5567899999987766643211 1111111111110 344566667777754332122 3456788
Q ss_pred HHHHHHhhcCCcEEEEcCCCCCCCHHH-HHHHHcCCcEEEcCCCCchhh------h-h-cCCceEEeCCCCHHHHHHHHH
Q 001541 558 PEIYRLAAKTKGVFINPAFIEPFGLTL-IEAAAHGLPIVATKNGGPVDI------H-R-VLDNGLLVDPHDQQSVADALL 628 (1057)
Q Consensus 558 ~~ly~~Aa~~~dv~v~ps~~Egfgl~~-lEAmA~G~PVVat~~Gg~~ei------v-~-~~~~Gllv~p~d~~~la~aI~ 628 (1057)
.+++..| |+.+ +|.-|. =.|+..|+|||+...-|+.-. - . -+..=++++| +.+.-+.+..
T Consensus 306 adiLH~a----daal------gmAGTAtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~~-~aq~a~~~~q 374 (412)
T COG4370 306 ADILHAA----DAAL------GMAGTATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVRP-EAQAAAQAVQ 374 (412)
T ss_pred HHHHHHH----HHHH------HhccchHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecCC-chhhHHHHHH
Confidence 9999999 7755 333334 447778999999886554321 0 0 1223356665 3333344445
Q ss_pred HHHhCHHHHHHHHHHHHHHh
Q 001541 629 KLVADKQLWARCRQNGLKNI 648 (1057)
Q Consensus 629 ~ll~d~~~~~~~~~~~~~~v 648 (1057)
++|.|++..+.++.|+++++
T Consensus 375 ~ll~dp~r~~air~nGqrRi 394 (412)
T COG4370 375 ELLGDPQRLTAIRHNGQRRI 394 (412)
T ss_pred HHhcChHHHHHHHhcchhhc
Confidence 59999999999999999998
|
|
| >PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=93.74 E-value=0.072 Score=54.50 Aligned_cols=90 Identities=18% Similarity=0.195 Sum_probs=59.2
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC--------chhhhhcCCceEEe
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG--------PVDIHRVLDNGLLV 615 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg--------~~eiv~~~~~Gllv 615 (1057)
.+|.+.++. +++.++|+.| |++|.- +-+.|+.|++++|+|+|.-...+ ....+.....|+.+
T Consensus 55 ~~v~~~~~~--~~m~~~m~~a----DlvIs~----aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~~g~~~~~ 124 (167)
T PF04101_consen 55 PNVKVFGFV--DNMAELMAAA----DLVISH----AGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAKKGAAIML 124 (167)
T ss_dssp CCCEEECSS--SSHHHHHHHH----SEEEEC----S-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHHCCCCCCS
T ss_pred CcEEEEech--hhHHHHHHHc----CEEEeC----CCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHHcCCcccc
Confidence 578888884 5799999999 987743 34589999999999998866555 12223333344444
Q ss_pred CC--CCHHHHHHHHHHHHhCHHHHHHHHHH
Q 001541 616 DP--HDQQSVADALLKLVADKQLWARCRQN 643 (1057)
Q Consensus 616 ~p--~d~~~la~aI~~ll~d~~~~~~~~~~ 643 (1057)
.. .+++.|.++|.+++.++.....+..+
T Consensus 125 ~~~~~~~~~L~~~i~~l~~~~~~~~~~~~~ 154 (167)
T PF04101_consen 125 DESELNPEELAEAIEELLSDPEKLKEMAKA 154 (167)
T ss_dssp ECCC-SCCCHHHHHHCHCCCHH-SHHHCCC
T ss_pred CcccCCHHHHHHHHHHHHcCcHHHHHHHHH
Confidence 32 23688999999999998865555443
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B. |
| >TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family | Back alignment and domain information |
|---|
Probab=93.73 E-value=0.2 Score=55.42 Aligned_cols=67 Identities=7% Similarity=0.070 Sum_probs=48.9
Q ss_pred cceEEEEEecCCCC-----------------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHH---
Q 001541 773 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS--- 820 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~-----------------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~--- 820 (1057)
++..|++|||+|+. ..+-+.+.+.|+.++++ |+.++|+|+|+..
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~----G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSK----GVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHC----CCeEEEEeCCCcchHH
Confidence 35689999999991 12335678889999886 8999999999843
Q ss_pred HHHHHHHhCCCCCCCCCeEEeCC
Q 001541 821 EIHSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 821 ~i~~~l~~lgl~~~~~D~lI~~n 843 (1057)
.+...|+.+|++...++.++...
T Consensus 150 ~T~~~Lkk~Gi~~~~~d~lllr~ 172 (266)
T TIGR01533 150 ATLKNLKRFGFPQADEEHLLLKK 172 (266)
T ss_pred HHHHHHHHcCcCCCCcceEEeCC
Confidence 45588899999533345566543
|
which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles. |
| >KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=93.59 E-value=0.28 Score=50.38 Aligned_cols=47 Identities=13% Similarity=0.186 Sum_probs=33.8
Q ss_pred CCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeCCCc
Q 001541 956 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 1007 (1057)
Q Consensus 956 ~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMgNa~ 1007 (1057)
.+-.|+.+|+.|++ |.+.+.++. +||+.| | ++|..-+..=++-|+.+
T Consensus 156 dsggKa~~i~~lrk--~~~~~~~~m-vGDGat-D-lea~~pa~afi~~~g~~ 202 (227)
T KOG1615|consen 156 DSGGKAEVIALLRK--NYNYKTIVM-VGDGAT-D-LEAMPPADAFIGFGGNV 202 (227)
T ss_pred cCCccHHHHHHHHh--CCChheeEE-ecCCcc-c-cccCCchhhhhccCCce
Confidence 33479999999999 777777777 999999 9 88877644334444333
|
|
| >TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668 | Back alignment and domain information |
|---|
Probab=93.34 E-value=0.17 Score=52.12 Aligned_cols=55 Identities=7% Similarity=0.009 Sum_probs=45.5
Q ss_pred cceEEEEEecCCCC----CcchHHHHHHHHHHHhhhcCCCeEEEEECCCC-HHHHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMT-ISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~----~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~-~~~i~~~l~~lgl 831 (1057)
.-+++++|+||||+ ..+.+.+.++|+.|++. |+.++|+|+.+ ...+..+++.+++
T Consensus 24 ~v~~vv~D~Dgtl~~~~~~~~~pgv~e~L~~Lk~~----g~~l~I~Sn~~~~~~~~~~~~~~gl 83 (170)
T TIGR01668 24 GIKGVVLDKDNTLVYPDHNEAYPALRDWIEELKAA----GRKLLIVSNNAGEQRAKAVEKALGI 83 (170)
T ss_pred CCCEEEEecCCccccCCCCCcChhHHHHHHHHHHc----CCEEEEEeCCchHHHHHHHHHHcCC
Confidence 45799999999994 25678899999999986 89999999988 5666777777776
|
This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family. |
| >PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule | Back alignment and domain information |
|---|
Probab=93.33 E-value=0.37 Score=58.49 Aligned_cols=139 Identities=14% Similarity=0.187 Sum_probs=78.1
Q ss_pred HHHHhhhCC--CCCcEEEEEeCCCCC---CCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHH
Q 001541 464 SEIMRFFTN--PRKPVILALARPDPK---KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 464 ~~~~~~~~~--~~~~~Il~vGRl~~~---Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~ 538 (1057)
.++..+... ++..++++.|..... +-+..+++||+.+. . .+...+.+ .....
T Consensus 264 ~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~----~-~~iW~~~~-~~~~~----------------- 320 (500)
T PF00201_consen 264 EELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLP----Q-RFIWKYEG-EPPEN----------------- 320 (500)
T ss_dssp HHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCST----T-EEEEEETC-SHGCH-----------------
T ss_pred cccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCC----C-cccccccc-ccccc-----------------
Confidence 455566554 334567888887521 11445666666653 1 23223333 21111
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chhhhhcCCceEE
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLL 614 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~eiv~~~~~Gll 614 (1057)
+..++...+++||. ++++... .++|| + -|--.++.||+.+|+|+|+-..-| ....+...+.|+.
T Consensus 321 ---l~~n~~~~~W~PQ~---~lL~hp~--v~~fi-t---HgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~~G~g~~ 388 (500)
T PF00201_consen 321 ---LPKNVLIVKWLPQN---DLLAHPR--VKLFI-T---HGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEEKGVGVV 388 (500)
T ss_dssp ---HHTTEEEESS--HH---HHHTSTT--EEEEE-E---S--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHHTTSEEE
T ss_pred ---ccceEEEeccccch---hhhhccc--ceeee-e---ccccchhhhhhhccCCccCCCCcccCCccceEEEEEeeEEE
Confidence 12478888999886 4455441 13444 2 244568999999999999987533 2334455567888
Q ss_pred eCCC--CHHHHHHHHHHHHhCHHHH
Q 001541 615 VDPH--DQQSVADALLKLVADKQLW 637 (1057)
Q Consensus 615 v~p~--d~~~la~aI~~ll~d~~~~ 637 (1057)
++.. +.+++.+||.++++|+.-+
T Consensus 389 l~~~~~~~~~l~~ai~~vl~~~~y~ 413 (500)
T PF00201_consen 389 LDKNDLTEEELRAAIREVLENPSYK 413 (500)
T ss_dssp EGGGC-SHHHHHHHHHHHHHSHHHH
T ss_pred EEecCCcHHHHHHHHHHHHhhhHHH
Confidence 7654 4689999999999998543
|
This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A .... |
| >PLN02207 UDP-glycosyltransferase | Back alignment and domain information |
|---|
Probab=93.33 E-value=24 Score=42.60 Aligned_cols=142 Identities=13% Similarity=0.183 Sum_probs=78.4
Q ss_pred HHHhhhCC--CCCcEEEEEeCCC--CCCCHHHHHHHHHhcccccCCCcEEEEEecCCC--CcccchhhHHHHHHHHHHHH
Q 001541 465 EIMRFFTN--PRKPVILALARPD--PKKNITTLVKAFGECRPLRELANLTLIMGNRDG--IDEMSSTSASVLLSVLKLID 538 (1057)
Q Consensus 465 ~~~~~~~~--~~~~~Il~vGRl~--~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~--~~~~~~~~~~~~~~l~~l~~ 538 (1057)
+..+++.. ++..+.++.|... ..+-+..++.+++.+. . .+..++.+... .+.+. + ...+
T Consensus 264 ~~~~WLd~~~~~sVVyvSfGS~~~~~~~q~~ela~~l~~~~----~-~flW~~r~~~~~~~~~lp-------~---~f~e 328 (468)
T PLN02207 264 ELMKWLDDQPEASVVFLCFGSMGRLRGPLVKEIAHGLELCQ----Y-RFLWSLRTEEVTNDDLLP-------E---GFLD 328 (468)
T ss_pred HHHHHHhcCCCCcEEEEEeccCcCCCHHHHHHHHHHHHHCC----C-cEEEEEeCCCccccccCC-------H---HHHh
Confidence 34444432 2456778888654 2345667777777663 2 44445553211 00010 1 1111
Q ss_pred HcCCCCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCC----chh-hhhcCCceE
Q 001541 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVD-IHRVLDNGL 613 (1057)
Q Consensus 539 ~~~l~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg----~~e-iv~~~~~Gl 613 (1057)
+. .+++...++.||.++ ++..+ .+.||-- -| -++++||+.+|+|+|+-...+ ... +++..+.|+
T Consensus 329 r~--~~~g~i~~W~PQ~~I---L~H~~--vg~FvTH---~G-wnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv 397 (468)
T PLN02207 329 RV--SGRGMICGWSPQVEI---LAHKA--VGGFVSH---CG-WNSIVESLWFGVPIVTWPMYAEQQLNAFLMVKELKLAV 397 (468)
T ss_pred hc--CCCeEEEEeCCHHHH---hcccc--cceeeec---Cc-cccHHHHHHcCCCEEecCccccchhhHHHHHHHhCceE
Confidence 22 245556689888854 44431 0345521 23 347799999999999977544 222 233345566
Q ss_pred EeC---------CCCHHHHHHHHHHHHh
Q 001541 614 LVD---------PHDQQSVADALLKLVA 632 (1057)
Q Consensus 614 lv~---------p~d~~~la~aI~~ll~ 632 (1057)
-+. .-+.++++++|.+++.
T Consensus 398 ~~~~~~~~~~~~~v~~e~i~~av~~vm~ 425 (468)
T PLN02207 398 ELKLDYRVHSDEIVNANEIETAIRCVMN 425 (468)
T ss_pred EEecccccccCCcccHHHHHHHHHHHHh
Confidence 431 1267899999999996
|
|
| >PRK08238 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=93.25 E-value=0.23 Score=59.68 Aligned_cols=48 Identities=15% Similarity=0.177 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCCCcE
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSD 846 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~nGa~ 846 (1057)
+...+.+++++++ |+.++|+|+.+...++.+++.+|+ ||.+||+++..
T Consensus 75 pga~e~L~~lk~~----G~~v~LaTas~~~~a~~i~~~lGl----Fd~Vigsd~~~ 122 (479)
T PRK08238 75 EEVLDYLRAERAA----GRKLVLATASDERLAQAVAAHLGL----FDGVFASDGTT 122 (479)
T ss_pred hhHHHHHHHHHHC----CCEEEEEeCCCHHHHHHHHHHcCC----CCEEEeCCCcc
Confidence 6778888888876 999999999999999999999997 68899987653
|
|
| >PLN02575 haloacid dehalogenase-like hydrolase | Back alignment and domain information |
|---|
Probab=92.55 E-value=0.8 Score=53.18 Aligned_cols=41 Identities=10% Similarity=0.088 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEe
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAM 1003 (1057)
+...+.+.++++|++++++++ +||+.. | +..=..+|..++.
T Consensus 274 ~Peifl~A~~~lgl~Peecl~-IGDS~~-D-IeAAk~AGm~~Ig 314 (381)
T PLN02575 274 DPEMFIYAAQLLNFIPERCIV-FGNSNQ-T-VEAAHDARMKCVA 314 (381)
T ss_pred CHHHHHHHHHHcCCCcccEEE-EcCCHH-H-HHHHHHcCCEEEE
Confidence 567889999999999999999 888888 8 9999888866444
|
|
| >TIGR01686 FkbH FkbH-like domain | Back alignment and domain information |
|---|
Probab=92.44 E-value=0.27 Score=56.10 Aligned_cols=55 Identities=9% Similarity=0.084 Sum_probs=47.0
Q ss_pred cceEEEEEecCCCC------C--------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHh----CCC
Q 001541 773 RKHIFVISVDCDST------T--------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS----GHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~------~--------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~----lgl 831 (1057)
.+|+|++|+|+||- . .+-+.+.++|+.|+++ |+.++|||.-+...+...++. +++
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~----Gi~lai~S~n~~~~a~~~l~~~~~~~~~ 74 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQ----GFLLALASKNDEDDAKKVFERRKDFILQ 74 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhC----CCEEEEEcCCCHHHHHHHHHhCccccCc
Confidence 36899999999992 1 2336789999999886 999999999999999999998 776
|
The C-terminal portion of this domain is unique to this family (by BLAST). |
| >smart00577 CPDc catalytic domain of ctd-like phosphatases | Back alignment and domain information |
|---|
Probab=92.41 E-value=0.31 Score=48.94 Aligned_cols=54 Identities=11% Similarity=0.022 Sum_probs=44.5
Q ss_pred cceEEEEEecCCCCC-----------------------------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHH
Q 001541 773 RKHIFVISVDCDSTT-----------------------------GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIH 823 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~~-----------------------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~ 823 (1057)
+|+++++|+|+||.+ .+-+.+.+.|+.|+ + ++.++|+|+-+...+.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~----~~~l~I~Ts~~~~~~~ 75 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-E----LFELVVFTAGLRMYAD 75 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-h----ccEEEEEeCCcHHHHH
Confidence 578999999999921 12356788999997 3 6899999999999999
Q ss_pred HHHHhCCC
Q 001541 824 SFLVSGHL 831 (1057)
Q Consensus 824 ~~l~~lgl 831 (1057)
.+++.+++
T Consensus 76 ~il~~l~~ 83 (148)
T smart00577 76 PVLDLLDP 83 (148)
T ss_pred HHHHHhCc
Confidence 99999877
|
|
| >PRK06769 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=91.87 E-value=0.33 Score=50.15 Aligned_cols=55 Identities=15% Similarity=0.013 Sum_probs=40.7
Q ss_pred cceEEEEEecCCCCC----------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHH--------HHHHHHHhCCC
Q 001541 773 RKHIFVISVDCDSTT----------GLLDATKKICEAVEKERTEGSIGFILSTSMTIS--------EIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~~----------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~--------~i~~~l~~lgl 831 (1057)
..|+|++|.||||.. .+-+..++.|+.|++. |+.++|+|+-+.. .+...++.+|+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~----G~~l~I~Tn~~~~~~~~~~~~~~~~~l~~~g~ 75 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKAN----HIKIFSFTNQPGIADGIATIADFVQELKGFGF 75 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHC----CCEEEEEECCchhcCCcCCHHHHHHHHHhCCc
Confidence 468999999999931 2446889999999986 8999999986531 23344666666
|
|
| >COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only] | Back alignment and domain information |
|---|
Probab=91.73 E-value=0.54 Score=47.45 Aligned_cols=58 Identities=5% Similarity=0.015 Sum_probs=51.8
Q ss_pred cCcceEEEEEecCCC----CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 771 RRRKHIFVISVDCDS----TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL----~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
....|-|++|+|.|| ....+++.++-+..++++ |+.++|.|-.+..-+..+.+.++++
T Consensus 25 ~~Gikgvi~DlDNTLv~wd~~~~tpe~~~W~~e~k~~----gi~v~vvSNn~e~RV~~~~~~l~v~ 86 (175)
T COG2179 25 AHGIKGVILDLDNTLVPWDNPDATPELRAWLAELKEA----GIKVVVVSNNKESRVARAAEKLGVP 86 (175)
T ss_pred HcCCcEEEEeccCceecccCCCCCHHHHHHHHHHHhc----CCEEEEEeCCCHHHHHhhhhhcCCc
Confidence 345688999999999 367899999999999997 9999999999999999999999984
|
|
| >PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=91.72 E-value=0.31 Score=56.05 Aligned_cols=55 Identities=11% Similarity=0.109 Sum_probs=43.5
Q ss_pred ceEEEEEecCCCCC--------------cchHHHHHHHHHHHhhhcCCCeEEEEECCC---------------CHHHHHH
Q 001541 774 KHIFVISVDCDSTT--------------GLLDATKKICEAVEKERTEGSIGFILSTSM---------------TISEIHS 824 (1057)
Q Consensus 774 kkLi~~DiDGTL~~--------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR---------------~~~~i~~ 824 (1057)
+|++|||.||||.. .+-+.+.++|+.|+++ |+.++|+|.- +...+..
T Consensus 2 ~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~----G~kL~IvTNq~g~G~~~~~~~~l~~~~~~i~~ 77 (354)
T PRK05446 2 QKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKA----GYKLVMVTNQDGLGTDSFPQEDFDPPHNLMMQ 77 (354)
T ss_pred CcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhC----CCeEEEEECCccccCccccHHHHhhHHHHHHH
Confidence 68999999999943 2345688999999876 8999999983 3445777
Q ss_pred HHHhCCCC
Q 001541 825 FLVSGHLS 832 (1057)
Q Consensus 825 ~l~~lgl~ 832 (1057)
+++.+++.
T Consensus 78 iL~~~gl~ 85 (354)
T PRK05446 78 IFESQGIK 85 (354)
T ss_pred HHHHcCCc
Confidence 88888883
|
|
| >PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed | Back alignment and domain information |
|---|
Probab=91.70 E-value=0.35 Score=51.92 Aligned_cols=37 Identities=16% Similarity=0.166 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
.|..+++ +++.+.+++++ +||+.+ | +.|.+.||..+|
T Consensus 148 ~K~~~l~----~~~~~~~~~i~-iGDs~~-D-i~aa~~Ag~~~a 184 (219)
T PRK09552 148 CKPSLIR----KLSDTNDFHIV-IGDSIT-D-LEAAKQADKVFA 184 (219)
T ss_pred chHHHHH----HhccCCCCEEE-EeCCHH-H-HHHHHHCCccee
Confidence 4776654 45777788888 899999 9 999999998666
|
|
| >PF10933 DUF2827: Protein of unknown function (DUF2827); InterPro: IPR021234 This is a family of uncharacterised proteins found in Burkholderia | Back alignment and domain information |
|---|
Probab=91.40 E-value=31 Score=39.51 Aligned_cols=120 Identities=18% Similarity=0.333 Sum_probs=87.7
Q ss_pred HHHHHHHHcCC--CCCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCCCchhhhhcC
Q 001541 532 SVLKLIDKYDL--YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL 609 (1057)
Q Consensus 532 ~l~~l~~~~~l--~~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~Gg~~eiv~~~ 609 (1057)
.....+..+++ .++..|.|.+ +++.+++.-. |++|.--+--+.+..-+|++--|=|.|-.. .++.
T Consensus 239 ~F~~f~~~ldlvr~gkasfegR~---~~p~fla~~t---D~VvSHqWeN~lNYlY~daLyggYPLVHNS-----~~l~-- 305 (364)
T PF10933_consen 239 TFVNFANSLDLVRDGKASFEGRF---DFPDFLAQHT---DAVVSHQWENPLNYLYYDALYGGYPLVHNS-----PLLK-- 305 (364)
T ss_pred HHHHHHHhhHHhhcCeeEEeeec---ChHHHHHhCC---CEEEeccccchhhHHHHHHHhcCCCcccCc-----chhc--
Confidence 34445555555 4667888874 7788887664 998877788889999999999999998743 2333
Q ss_pred CceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHhhcCCH--HHHHHHHHHHH
Q 001541 610 DNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSW--PEHCKTYLSRI 664 (1057)
Q Consensus 610 ~~Gllv~p~d~~~la~aI~~ll~-d~~~~~~~~~~~~~~v~~fsw--~~~a~~~l~~~ 664 (1057)
+.|+..+..|..+=+++|++++. ....+...++.+++.+..++. +..+..|.+.+
T Consensus 306 d~GYYY~~fD~~~G~r~L~~A~~~HD~~~~~Y~~ra~~~l~~~~p~n~~nv~~y~~~L 363 (364)
T PF10933_consen 306 DVGYYYPDFDAFEGARQLLRAIREHDADLDAYRARARRLLDRLSPENPANVRAYEARL 363 (364)
T ss_pred ccCcCCCCccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhhCCCCHHHHHHHHHhh
Confidence 36999999999999999999987 455678888888888754443 34455555443
|
|
| >TIGR01990 bPGM beta-phosphoglucomutase | Back alignment and domain information |
|---|
Probab=90.98 E-value=1.4 Score=45.56 Aligned_cols=41 Identities=7% Similarity=0.019 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
-+...+++.++++|++++++++ +||+.+ | +..-+.+|..++
T Consensus 142 p~p~~~~~~~~~~~~~~~~~v~-vgD~~~-d-i~aA~~aG~~~i 182 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPSECIG-IEDAQA-G-IEAIKAAGMFAV 182 (185)
T ss_pred CChHHHHHHHHHcCCCHHHeEE-EecCHH-H-HHHHHHcCCEEE
Confidence 4678889999999999999999 888888 8 888888886543
|
The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state. |
| >PRK11009 aphA acid phosphatase/phosphotransferase; Provisional | Back alignment and domain information |
|---|
Probab=90.53 E-value=0.91 Score=49.39 Aligned_cols=36 Identities=11% Similarity=0.086 Sum_probs=27.9
Q ss_pred HHHHHHHHHhhhcCCCeEEEEECCCC----HHHHHHHHHhCCCC
Q 001541 793 TKKICEAVEKERTEGSIGFILSTSMT----ISEIHSFLVSGHLS 832 (1057)
Q Consensus 793 t~~al~~l~~~~~~~gi~~vIaTGR~----~~~i~~~l~~lgl~ 832 (1057)
.++.|+.++++ |+.++++|||+ ...+..+++.+|++
T Consensus 119 a~elL~~L~~~----G~~I~iVTnR~~~k~~~t~~~Llk~~gip 158 (237)
T PRK11009 119 ARQLIDMHVKR----GDSIYFITGRTATKTETVSKTLADDFHIP 158 (237)
T ss_pred HHHHHHHHHHC----CCeEEEEeCCCCcccHHHHHHHHHHcCCC
Confidence 78888888876 89999999996 33555666668883
|
|
| >PLN03243 haloacid dehalogenase-like hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=90.24 E-value=3 Score=46.12 Aligned_cols=40 Identities=15% Similarity=0.162 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
+...+.+.++++|++++++++ +||+.. | +..=..+|..++
T Consensus 167 ~Pe~~~~a~~~l~~~p~~~l~-IgDs~~-D-i~aA~~aG~~~i 206 (260)
T PLN03243 167 DPEMFMYAAERLGFIPERCIV-FGNSNS-S-VEAAHDGCMKCV 206 (260)
T ss_pred CHHHHHHHHHHhCCChHHeEE-EcCCHH-H-HHHHHHcCCEEE
Confidence 456889999999999999999 899888 8 998888887654
|
|
| >PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins | Back alignment and domain information |
|---|
Probab=90.05 E-value=1 Score=49.30 Aligned_cols=67 Identities=19% Similarity=0.253 Sum_probs=49.7
Q ss_pred CcceEEEEEecCCC-C----Cc-chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCCCCCeEEeCC
Q 001541 772 RRKHIFVISVDCDS-T----TG-LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL-~----~~-i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~~~D~lI~~n 843 (1057)
....+||||+|-|| + .+ ..+.+.+.|..|++. +-+.+.-++|- ...+..-++++++. .-||.+||.+
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~---g~vLvLWSyG~-~eHV~~sl~~~~L~-~~Fd~ii~~G 192 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQ---GCVLVLWSYGN-REHVRHSLKELKLE-GYFDIIICGG 192 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHc---CCEEEEecCCC-HHHHHHHHHHhCCc-cccEEEEeCC
Confidence 45679999999999 2 12 347888999999997 33555556664 56677888888886 4688899843
|
|
| >TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253 | Back alignment and domain information |
|---|
Probab=89.57 E-value=1.8 Score=46.14 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCC-CCCccccccCcceE-EEeC
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESG-DTDYEGLLGGVHKT-VILK 1004 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~-n~D~~eML~~ag~g-VAMg 1004 (1057)
+....+.+++++|++++++++ +||+. + | +..=+.+|.. |.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-igDs~~~-d-i~~A~~aG~~~i~~~ 195 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPEEAVM-VGDRLDK-D-IKGAKNLGMKTVWIN 195 (221)
T ss_pred CHHHHHHHHHHcCCChhhEEE-ECCChHH-H-HHHHHHCCCEEEEEC
Confidence 456899999999999999988 88886 6 7 8888888865 4443
|
This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). |
| >PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin [] | Back alignment and domain information |
|---|
Probab=89.11 E-value=0.28 Score=50.06 Aligned_cols=54 Identities=11% Similarity=0.094 Sum_probs=37.1
Q ss_pred eEEEEEecCCCC---------------CcchHHHHHHHHHHHhhhcCCCeEEEEEC-----CC--CH-------HHHHHH
Q 001541 775 HIFVISVDCDST---------------TGLLDATKKICEAVEKERTEGSIGFILST-----SM--TI-------SEIHSF 825 (1057)
Q Consensus 775 kLi~~DiDGTL~---------------~~i~~~t~~al~~l~~~~~~~gi~~vIaT-----GR--~~-------~~i~~~ 825 (1057)
|+.+||+||||. .-+.+.+.++|+++.++ |..+||.| |+ .. .-+..+
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~----Gy~IvIvTNQ~gi~~~~~~~~~~~~~~ki~~i 76 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKK----GYKIVIVTNQSGIGRGMGEKDLENFHEKIENI 76 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHT----TEEEEEEEE-CCCCCTBTCCHHHHHHHHHHHH
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhc----CCeEEEEeCccccccccccchHHHHHHHHHHH
Confidence 689999999991 11344688999999886 89999987 55 11 234556
Q ss_pred HHhCCCC
Q 001541 826 LVSGHLS 832 (1057)
Q Consensus 826 l~~lgl~ 832 (1057)
++.++++
T Consensus 77 l~~l~ip 83 (159)
T PF08645_consen 77 LKELGIP 83 (159)
T ss_dssp HHHCTS-
T ss_pred HHHcCCc
Confidence 7778873
|
; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A .... |
| >PLN03190 aminophospholipid translocase; Provisional | Back alignment and domain information |
|---|
Probab=88.82 E-value=2.8 Score=55.93 Aligned_cols=41 Identities=17% Similarity=0.082 Sum_probs=37.9
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.+.++|+.++++ |+.+.+.||-....+..+..+.++
T Consensus 725 D~lr~~v~~~I~~l~~a----gi~v~mlTGD~~~tAi~IA~s~~L 765 (1178)
T PLN03190 725 DKLQQGVPEAIESLRTA----GIKVWVLTGDKQETAISIGYSSKL 765 (1178)
T ss_pred cCCchhHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHhCC
Confidence 56788999999999997 999999999999999999999998
|
|
| >PRK11587 putative phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=88.66 E-value=4.5 Score=43.20 Aligned_cols=45 Identities=11% Similarity=-0.062 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcce-EEEeCCCc
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~-gVAMgNa~ 1007 (1057)
+...+...++++|++++++++ +||+.. | +..=..+|. .|++.+..
T Consensus 140 ~p~~~~~~~~~~g~~p~~~l~-igDs~~-d-i~aA~~aG~~~i~v~~~~ 185 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQECVV-VEDAPA-G-VLSGLAAGCHVIAVNAPA 185 (218)
T ss_pred CcHHHHHHHHHcCCCcccEEE-Eecchh-h-hHHHHHCCCEEEEECCCC
Confidence 456778889999999999998 888888 8 888888886 46665443
|
|
| >KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=88.55 E-value=2 Score=53.28 Aligned_cols=55 Identities=7% Similarity=-0.035 Sum_probs=45.1
Q ss_pred CcceEEEEEecCCCCCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 772 RRKHIFVISVDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 772 ~~kkLi~~DiDGTL~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
....|.|+-+=|-+. .+-++++++++.+++. ||.|...||=+...+..+.+++|+
T Consensus 569 ~E~~LtFvGlVGi~D-PPR~ev~~ai~~c~~a----GIrV~mITGD~~~TA~AI~r~iGi 623 (972)
T KOG0202|consen 569 AESDLTFVGLVGILD-PPRPEVADAIELCRQA----GIRVIMITGDNKETAEAIAREIGI 623 (972)
T ss_pred cccceEEEEEeeccC-CCchhHHHHHHHHHHc----CCEEEEEcCCCHHHHHHHHHHhCC
Confidence 344677766666553 3456899999999986 999999999999999999999997
|
|
| >TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase | Back alignment and domain information |
|---|
Probab=88.52 E-value=2.2 Score=56.86 Aligned_cols=41 Identities=15% Similarity=0.109 Sum_probs=37.6
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+.+.+.++|+.|++. ||++.+.||=....+..+..+.|+
T Consensus 630 D~lq~~v~etI~~L~~A----GIkv~mlTGD~~~TA~~IA~~~~i 670 (1057)
T TIGR01652 630 DKLQEGVPETIELLRQA----GIKIWVLTGDKVETAINIGYSCRL 670 (1057)
T ss_pred hhhhhccHHHHHHHHHC----CCeEEEEcCCcHHHHHHHHHHhCC
Confidence 45677889999999997 999999999999999999999998
|
This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes. |
| >TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5 | Back alignment and domain information |
|---|
Probab=88.11 E-value=0.84 Score=52.15 Aligned_cols=58 Identities=7% Similarity=0.029 Sum_probs=41.1
Q ss_pred EEEEEecCCC--CCcchHHHHHHHHHHHhhhcCCCeEEEEE---CCCCHHHHHHHH-HhCCCCC
Q 001541 776 IFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILS---TSMTISEIHSFL-VSGHLSP 833 (1057)
Q Consensus 776 Li~~DiDGTL--~~~i~~~t~~al~~l~~~~~~~gi~~vIa---TGR~~~~i~~~l-~~lgl~~ 833 (1057)
.|+||+|||| ...+.+...++++.++.....-|+.+++. +|++.......+ +.+|++.
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~ 65 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDV 65 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCC
Confidence 5899999999 35667788999999986200015555554 578888866666 8898853
|
The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog. |
| >PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B | Back alignment and domain information |
|---|
Probab=87.93 E-value=0.4 Score=49.79 Aligned_cols=38 Identities=5% Similarity=0.077 Sum_probs=32.6
Q ss_pred HHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCC
Q 001541 791 DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 791 ~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~ 832 (1057)
+.+.+.|+.++++ |+.++|+||-+...+..+++.++++
T Consensus 92 ~~~~e~i~~~~~~----~~~v~IvS~~~~~~i~~~~~~~~i~ 129 (192)
T PF12710_consen 92 PDAMELIRELKDN----GIKVVIVSGSPDEIIEPIAERLGID 129 (192)
T ss_dssp TTHHHHHHHHHHT----TSEEEEEEEEEHHHHHHHHHHTTSS
T ss_pred hhHHHHHHHHHHC----CCEEEEECCCcHHHHHHHHHHcCCC
Confidence 3556888888876 8999999999999999999999983
|
|
| >PF11440 AGT: DNA alpha-glucosyltransferase; InterPro: IPR016223 The T4 bacteriophage of E | Back alignment and domain information |
|---|
Probab=87.37 E-value=51 Score=36.37 Aligned_cols=141 Identities=15% Similarity=0.086 Sum_probs=75.6
Q ss_pred EEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHH-----------HHHcCC--CCC
Q 001541 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKL-----------IDKYDL--YGQ 545 (1057)
Q Consensus 479 l~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l-----------~~~~~l--~~~ 545 (1057)
+|+||..-.||...+++.-+...+ .+++.-++-+-+.... .-.+... +++..+ .+.
T Consensus 187 ~yigR~Tt~kG~~~mfD~h~~~lK---~~~~~t~~~GierS~A--------~~~i~d~~~~~~y~~~~~~~~~~~~pN~~ 255 (355)
T PF11440_consen 187 RYIGRQTTWKGPRRMFDLHEKILK---PAGFKTIMEGIERSPA--------KISIKDHGIPYEYYPKLDCDEPKPAPNSP 255 (355)
T ss_dssp EEE--SSGGG-HHHHHHHHHHTTT---TTT-EEEEE---SSTH--------HHHHHHTT--EEEE-CTGGGG---SSS--
T ss_pred eeeeeeeeecCcHHHhhhHHHhcC---CcchhHHhhhhhcCCc--------eeeeecCCcccccCccccccCcccCCCCc
Confidence 799999999999999999998753 3677656644332111 1111111 111112 223
Q ss_pred EEeCCCCCCCcHHHHHHHhhcCCcEEEEcC------CCCCCCHHHHHHHHcCC-cEEEcCCCCchh-------hhhcCCc
Q 001541 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPA------FIEPFGLTLIEAAAHGL-PIVATKNGGPVD-------IHRVLDN 611 (1057)
Q Consensus 546 V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps------~~Egfgl~~lEAmA~G~-PVVat~~Gg~~e-------iv~~~~~ 611 (1057)
+-.+|..=.+|..+.++.+ ....--+ +.+.+-.+-+|..|||+ ||.-...|...- ++..-..
T Consensus 256 ~~v~~~Yi~~E~~~~Maks----~Fgy~~~k~~~~y~~r~mEYt~iE~~A~GtIPVF~k~~GEN~r~~~D~~~~~~~~~~ 331 (355)
T PF11440_consen 256 VPVYGPYIRSEGLERMAKS----LFGYQLSKLQQKYLQRSMEYTQIELIAVGTIPVFDKSWGENNRFTLDGTRYIDHPYS 331 (355)
T ss_dssp EEEESS--HHHHHHHHHTE----EEEEE-----GGG-SS---HHHHHHHHCTSEEEEEHHHHHHSB-TTTSSBGGSS--S
T ss_pred ceecchhhhHHHHHHHhhc----cceeecHHHHHHHHHhhhhhheeeeeeeceeeeeeccccccceeeecCceeeccCcc
Confidence 5556666678888888887 4433222 24568889999999997 565554443222 2233345
Q ss_pred eEEeCCCCHHHHHHHHHHHHhCH
Q 001541 612 GLLVDPHDQQSVADALLKLVADK 634 (1057)
Q Consensus 612 Gllv~p~d~~~la~aI~~ll~d~ 634 (1057)
.+.++.+|.++-.+.|.++-++.
T Consensus 332 ~I~~De~dle~T~ekl~E~a~~~ 354 (355)
T PF11440_consen 332 AIYFDENDLESTVEKLIEVANNR 354 (355)
T ss_dssp -EEE-TTSHHHHHHHHHHHHT-H
T ss_pred eeEeccchHHHHHHHHHHHhccC
Confidence 68899999999888888776553
|
coli protects its DNA via two glycosyltransferases which glucosylate 5-hydroxymethyl cytosines (5-HMC) using UDP-glucose. These two proteins are the retaining alpha-glucosyltransferase (AGT) and the inverting beta-glucosyltransferase (BGT). The proteins in this family are AGT. AGT adopts the GT-B fold and binds both the sugar donor and acceptor to the C-terminal domain. There is evidence for a role of AGT in the base-flipping mechanism and for its specific recognition of the acceptor base [].; PDB: 1YA6_B 1Y8Z_B 1Y6F_B 1XV5_A 1Y6G_B. |
| >PLN02770 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=87.08 E-value=6.5 Score=43.06 Aligned_cols=41 Identities=10% Similarity=-0.085 Sum_probs=34.5
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEE
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVA 1002 (1057)
-+...+.+.++++|++++++++ +||+.. | +..=+.+|.-++
T Consensus 165 P~p~~~~~a~~~~~~~~~~~l~-vgDs~~-D-i~aA~~aGi~~i 205 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKDHTFV-FEDSVS-G-IKAGVAAGMPVV 205 (248)
T ss_pred CChHHHHHHHHHhCCChhHEEE-EcCCHH-H-HHHHHHCCCEEE
Confidence 3457789999999999999998 999888 8 888888887654
|
|
| >COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only] | Back alignment and domain information |
|---|
Probab=86.82 E-value=0.86 Score=49.11 Aligned_cols=35 Identities=14% Similarity=0.150 Sum_probs=24.2
Q ss_pred HHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 793 TKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 793 t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
+.+.|..|+++ |+.++++|+.+...+...++.+|+
T Consensus 91 v~~~l~~L~~~----~i~~avaS~s~~~~~~~~L~~~gl 125 (221)
T COG0637 91 VVELLEQLKAR----GIPLAVASSSPRRAAERVLARLGL 125 (221)
T ss_pred HHHHHHHHHhc----CCcEEEecCChHHHHHHHHHHccC
Confidence 34555666664 577777777777777777777776
|
|
| >PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea | Back alignment and domain information |
|---|
Probab=86.68 E-value=0.95 Score=46.52 Aligned_cols=54 Identities=11% Similarity=0.177 Sum_probs=36.6
Q ss_pred ceEEEEEecCCC------CC----------------------cchHHHHHHHHHHHhhhcCCCeEEEEECCC-CHHHHHH
Q 001541 774 KHIFVISVDCDS------TT----------------------GLLDATKKICEAVEKERTEGSIGFILSTSM-TISEIHS 824 (1057)
Q Consensus 774 kkLi~~DiDGTL------~~----------------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR-~~~~i~~ 824 (1057)
.||||||+|+|| ++ .+-+.+..+|+.|++. |+.+++||=- .+.-+++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~----gv~lavASRt~~P~~A~~ 78 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKER----GVKLAVASRTDEPDWARE 78 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHC----T--EEEEE--S-HHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHC----CCEEEEEECCCChHHHHH
Confidence 369999999999 11 1235678999999986 9999999853 4567899
Q ss_pred HHHhCCC
Q 001541 825 FLVSGHL 831 (1057)
Q Consensus 825 ~l~~lgl 831 (1057)
.|+.+++
T Consensus 79 ~L~~l~i 85 (169)
T PF12689_consen 79 LLKLLEI 85 (169)
T ss_dssp HHHHTT-
T ss_pred HHHhcCC
Confidence 9999988
|
The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A. |
| >COG2327 WcaK Polysaccharide pyruvyl transferase family protein [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=86.59 E-value=71 Score=37.23 Aligned_cols=85 Identities=16% Similarity=0.248 Sum_probs=51.6
Q ss_pred CCEEeCCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcCCC-CchhhhhcC-Cce--EEeCCCC
Q 001541 544 GQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG-GPVDIHRVL-DNG--LLVDPHD 619 (1057)
Q Consensus 544 ~~V~f~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~~G-g~~eiv~~~-~~G--llv~p~d 619 (1057)
.++.+..--..+++-..++.+ |++|-.-+ =.++=|++.|+|+|+-..- -...+.++. -.+ +-+.|.|
T Consensus 266 ~~i~~~~d~~~~~~~~~l~~~----dl~Vg~R~-----HsaI~al~~g~p~i~i~Y~~K~~~l~~~~gl~~~~~~i~~~~ 336 (385)
T COG2327 266 AEILVSSDEYAEELGGILAAC----DLIVGMRL-----HSAIMALAFGVPAIAIAYDPKVRGLMQDLGLPGFAIDIDPLD 336 (385)
T ss_pred cceEeecchHHHHHHHHhccC----ceEEeehh-----HHHHHHHhcCCCeEEEeecHHHHHHHHHcCCCcccccCCCCc
Confidence 455554332235667788888 88774432 1467799999999996532 222333221 122 3456778
Q ss_pred HHHHHHHHHHHHh-CHHHH
Q 001541 620 QQSVADALLKLVA-DKQLW 637 (1057)
Q Consensus 620 ~~~la~aI~~ll~-d~~~~ 637 (1057)
.+.+..+..+.+. .++.+
T Consensus 337 ~~~l~~~~~e~~~~~~~~~ 355 (385)
T COG2327 337 AEILSAVVLERLTKLDELR 355 (385)
T ss_pred hHHHHHHHHHHHhccHHHH
Confidence 8899988888887 44433
|
|
| >PRK13582 thrH phosphoserine phosphatase; Provisional | Back alignment and domain information |
|---|
Probab=86.44 E-value=1.6 Score=46.12 Aligned_cols=39 Identities=21% Similarity=0.395 Sum_probs=28.1
Q ss_pred CHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 959 sKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
.|..+++.+ +...+++++ +||+.+ | +.|.+.+|.||+.+
T Consensus 132 ~k~~~l~~~----~~~~~~~v~-iGDs~~-D-~~~~~aa~~~v~~~ 170 (205)
T PRK13582 132 GKRQAVKAL----KSLGYRVIA-AGDSYN-D-TTMLGEADAGILFR 170 (205)
T ss_pred hHHHHHHHH----HHhCCeEEE-EeCCHH-H-HHHHHhCCCCEEEC
Confidence 355555443 333466777 899988 9 99999999998865
|
|
| >TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase | Back alignment and domain information |
|---|
Probab=86.05 E-value=3 Score=45.66 Aligned_cols=44 Identities=18% Similarity=-0.067 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHhCCC-cccEEEEecCCCCCCccccccCcceE-EEeCCC
Q 001541 960 RSQALRYLYLRWGVE-LSKMVVFVGESGDTDYEGLLGGVHKT-VILKGI 1006 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~-~e~viaf~GD~~n~D~~eML~~ag~g-VAMgNa 1006 (1057)
+-..+.+.++++|+. ++++++ +||+.+ | +.+=..+|.. |++..+
T Consensus 158 ~p~~~~~a~~~l~~~~~~~~l~-IGDs~~-D-i~aA~~aGi~~i~v~~g 203 (253)
T TIGR01422 158 APWMALKNAIELGVYDVAACVK-VGDTVP-D-IEEGRNAGMWTVGLILS 203 (253)
T ss_pred CHHHHHHHHHHcCCCCchheEE-ECCcHH-H-HHHHHHCCCeEEEEecC
Confidence 456788899999995 899988 899988 8 8888888854 444433
|
This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent. |
| >TIGR01680 Veg_Stor_Prot vegetative storage protein | Back alignment and domain information |
|---|
Probab=85.86 E-value=2.3 Score=46.84 Aligned_cols=55 Identities=15% Similarity=0.111 Sum_probs=40.9
Q ss_pred ceEEEEEecCCCC-------------C-----------------cchHHHHHHHHHHHhhhcCCCeEEEEECCCCH---H
Q 001541 774 KHIFVISVDCDST-------------T-----------------GLLDATKKICEAVEKERTEGSIGFILSTSMTI---S 820 (1057)
Q Consensus 774 kkLi~~DiDGTL~-------------~-----------------~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~---~ 820 (1057)
+-+++||||+|+. . ..-+.+.+..+.+++. |+.+++.|||+- .
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~----G~kIf~VSgR~e~~r~ 176 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSL----GFKIIFLSGRLKDKQA 176 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHC----CCEEEEEeCCchhHHH
Confidence 4699999999982 0 0124566777888876 899999999984 3
Q ss_pred HHHHHHHhCCCC
Q 001541 821 EIHSFLVSGHLS 832 (1057)
Q Consensus 821 ~i~~~l~~lgl~ 832 (1057)
.....|...|++
T Consensus 177 aT~~NL~kaGy~ 188 (275)
T TIGR01680 177 VTEANLKKAGYH 188 (275)
T ss_pred HHHHHHHHcCCC
Confidence 456778888884
|
The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP. |
| >COG1703 ArgK Putative periplasmic protein kinase ArgK and related GTPases of G3E family [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=85.81 E-value=41 Score=37.66 Aligned_cols=119 Identities=18% Similarity=0.183 Sum_probs=76.3
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCcc-CCcccccCCCCCCccccccCCCCCeEEEEccCCCccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSY-GEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI 268 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y-~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~p~~~~l 268 (1057)
.-|=.+.+-.|.+.|.++| |+|-|++-.+++|....+- |..+.| ++....+|+.|..+|....
T Consensus 61 GaGKSTli~~L~~~l~~~G--~rVaVlAVDPSSp~TGGsiLGDRiRM----------~~~~~~~~vFiRs~~srG~---- 124 (323)
T COG1703 61 GAGKSTLIEALGRELRERG--HRVAVLAVDPSSPFTGGSILGDRIRM----------QRLAVDPGVFIRSSPSRGT---- 124 (323)
T ss_pred CCchHHHHHHHHHHHHHCC--cEEEEEEECCCCCCCCccccccHhhH----------HhhccCCCeEEeecCCCcc----
Confidence 3477889999999999999 9999999887665432211 222222 3344467888888776433
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhcCCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhh
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDK 343 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~ 343 (1057)
+-......... .+.+.. .-+|+|.....-.|..=.-+.....+-++++....+.+.
T Consensus 125 --------lGGlS~at~~~----i~~ldA-------aG~DvIIVETVGvGQsev~I~~~aDt~~~v~~pg~GD~~ 180 (323)
T COG1703 125 --------LGGLSRATREA----IKLLDA-------AGYDVIIVETVGVGQSEVDIANMADTFLVVMIPGAGDDL 180 (323)
T ss_pred --------chhhhHHHHHH----HHHHHh-------cCCCEEEEEecCCCcchhHHhhhcceEEEEecCCCCcHH
Confidence 11122222111 122222 459999999876666666666667888899999887654
|
|
| >TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase | Back alignment and domain information |
|---|
Probab=85.40 E-value=1.9 Score=46.02 Aligned_cols=41 Identities=15% Similarity=0.061 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceEEEeC
Q 001541 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 957 gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~gVAMg 1004 (1057)
|..|..+++.+. ...+++++ +||+.+ | +.|++.|+..+|=+
T Consensus 142 g~~K~~~l~~~~----~~~~~~i~-iGDg~~-D-~~~a~~Ad~~~ar~ 182 (214)
T TIGR03333 142 GCCKPSLIRKLS----EPNDYHIV-IGDSVT-D-VEAAKQSDLCFARD 182 (214)
T ss_pred CCCHHHHHHHHh----hcCCcEEE-EeCCHH-H-HHHHHhCCeeEehH
Confidence 346888887664 34566766 899999 9 99999999866643
|
Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX. |
| >PRK13478 phosphonoacetaldehyde hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=84.81 E-value=5.6 Score=44.02 Aligned_cols=42 Identities=12% Similarity=-0.163 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHhCCC-cccEEEEecCCCCCCccccccCcceE-EEeC
Q 001541 960 RSQALRYLYLRWGVE-LSKMVVFVGESGDTDYEGLLGGVHKT-VILK 1004 (1057)
Q Consensus 960 Kg~AL~~L~~~lgI~-~e~viaf~GD~~n~D~~eML~~ag~g-VAMg 1004 (1057)
+...+...++++|++ ++++++ +||+.+ | +.+=..+|.. |++.
T Consensus 160 ~p~~~~~a~~~l~~~~~~e~l~-IGDs~~-D-i~aA~~aG~~~i~v~ 203 (267)
T PRK13478 160 YPWMALKNAIELGVYDVAACVK-VDDTVP-G-IEEGLNAGMWTVGVI 203 (267)
T ss_pred ChHHHHHHHHHcCCCCCcceEE-EcCcHH-H-HHHHHHCCCEEEEEc
Confidence 356788999999996 688888 899988 8 8888888853 4443
|
|
| >PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases | Back alignment and domain information |
|---|
Probab=84.63 E-value=2.5 Score=43.40 Aligned_cols=59 Identities=5% Similarity=0.027 Sum_probs=46.2
Q ss_pred cCcceEEEEEecCCCC----CcchHHHHHHHHHHHhhhcCCCe-EEEEECCC-------CHHHHHHHHHhCCCC
Q 001541 771 RRRKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSI-GFILSTSM-------TISEIHSFLVSGHLS 832 (1057)
Q Consensus 771 ~~~kkLi~~DiDGTL~----~~i~~~t~~al~~l~~~~~~~gi-~~vIaTGR-------~~~~i~~~l~~lgl~ 832 (1057)
....|.|+||.|.||+ ..+++...+.++++++. .+. .++|.|=- ....+..+-+.+|++
T Consensus 38 ~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~---~~~~~v~IvSNsaGs~~d~~~~~a~~~~~~lgIp 108 (168)
T PF09419_consen 38 KKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQ---FGKDRVLIVSNSAGSSDDPDGERAEALEKALGIP 108 (168)
T ss_pred hcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHH---CCCCeEEEEECCCCcccCccHHHHHHHHHhhCCc
Confidence 3567899999999994 67899999999999987 343 45565544 367788888999984
|
All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family. |
| >KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.65 E-value=7.1 Score=47.53 Aligned_cols=41 Identities=20% Similarity=0.165 Sum_probs=33.2
Q ss_pred CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 787 TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 787 ~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
.++.+..+-.|+.|+.+ ||++=..||--+..+.-+.+.-++
T Consensus 657 DkLQ~dVk~tLElLRNA----gikiWMLTGDKlETA~ciAkSs~L 697 (1051)
T KOG0210|consen 657 DKLQDDVKPTLELLRNA----GIKIWMLTGDKLETAICIAKSSRL 697 (1051)
T ss_pred HHHhhhhHhHHHHHhhc----CcEEEEEcCcchhheeeeehhccc
Confidence 56788889999999987 999999999988887666555544
|
|
| >PTZ00445 p36-lilke protein; Provisional | Back alignment and domain information |
|---|
Probab=83.43 E-value=2.1 Score=45.23 Aligned_cols=45 Identities=9% Similarity=0.064 Sum_probs=36.0
Q ss_pred EecCCCCHHHHHHHHHHHhCCCcccEEEEecCCCCCCccccccCcceE
Q 001541 953 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT 1000 (1057)
Q Consensus 953 I~p~gasKg~AL~~L~~~lgI~~e~viaf~GD~~n~D~~eML~~ag~g 1000 (1057)
+.|.-..|..=++++++++|+++++++. +||... . ++--+..|.-
T Consensus 156 ~KPdp~iK~yHle~ll~~~gl~peE~LF-IDD~~~-N-VeaA~~lGi~ 200 (219)
T PTZ00445 156 DAPMPLDKSYHLKQVCSDFNVNPDEILF-IDDDMN-N-CKNALKEGYI 200 (219)
T ss_pred cCCCccchHHHHHHHHHHcCCCHHHeEe-ecCCHH-H-HHHHHHCCCE
Confidence 3466667888899999999999999977 888776 5 8877777744
|
|
| >PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway | Back alignment and domain information |
|---|
Probab=83.36 E-value=4.1 Score=46.52 Aligned_cols=198 Identities=13% Similarity=0.127 Sum_probs=99.1
Q ss_pred cceEEEEEecCCC--C----CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHh----------C-CCCCCC
Q 001541 773 RKHIFVISVDCDS--T----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS----------G-HLSPSD 835 (1057)
Q Consensus 773 ~kkLi~~DiDGTL--~----~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~----------l-gl~~~~ 835 (1057)
.=+|+-||=|+|| . ..-++.+...|+-|++ |+.|+|+|.=.+.++.++-+. . .++...
T Consensus 146 ~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~-----gv~VgIVTAAGY~~a~kY~~RL~GLL~a~~~~~~Lt~~q 220 (408)
T PF06437_consen 146 GLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRR-----GVKVGIVTAAGYPGAEKYEERLHGLLDAFKDSTDLTPEQ 220 (408)
T ss_pred CceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhc-----CCeEEEEeCCCCCChHHHHHHHHHHHHHHHhccCCCHHH
Confidence 4479999999999 1 2334566666666664 789999998777666554333 2 332100
Q ss_pred C-CeEEeCCCcEEEe---ccCC-CCCCCccccccchhhcccccchhhHHHHHHHhhhcccccccccccccccccccccCc
Q 001541 836 F-DAFICNSGSDLYY---STLN-SEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTN 910 (1057)
Q Consensus 836 ~-D~lI~~nGa~I~~---~~~~-~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 910 (1057)
- ..+|. |++.-| .... .....+.++..|...-...|..+.+..+++..............-+..+-.+ .
T Consensus 221 k~~l~VM--GGEsNYLfr~~~~~~~~L~~v~~~~W~~~~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lpa~IiRK----~ 294 (408)
T PF06437_consen 221 KSNLYVM--GGESNYLFRYDPESPHGLEFVPREEWLLPEMKTWSEEDITELLDIAEAALRDCVKRLNLPATIIRK----E 294 (408)
T ss_pred hcCEEEe--cccceeEEEecCCCCCCeEEccHHhccCccccCcCHHHHHHHHHHHHHHHHHHHHHcCCCeeEEee----c
Confidence 1 12333 333221 1111 1223455667888777788998888777653322211111000000000000 0
Q ss_pred ceEEEEecCCCCC--ccHHH----HHHHHHHhcCc--EEEEEeeCCe--eEEEecCCCCHHHHHHHHHHHh----CCCcc
Q 001541 911 YCYAFSVQKPGMT--PPVKE----LRKVLRIQALR--CHVIYCQNGS--RINVIPVLASRSQALRYLYLRW----GVELS 976 (1057)
Q Consensus 911 ~k~~~~~~~~~~~--~~~~e----l~~~l~~~~~~--~~v~~s~~~~--~lEI~p~gasKg~AL~~L~~~l----gI~~e 976 (1057)
..+-..-...... ..++| +++.|...... +.+..-.++. ++|| .+|.-|++.|.+++ +|.++
T Consensus 295 RAVGivP~~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDI----GdKs~GV~~lQ~y~~~~~~i~~~ 370 (408)
T PF06437_consen 295 RAVGIVPKPGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDI----GDKSLGVRALQKYFDPEGGIKPS 370 (408)
T ss_pred ceeeEecCCCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEc----CCcHHhHHHHHHHHHhccCCCcc
Confidence 0010110001101 11222 23333332222 2222222221 4555 58999999999999 99999
Q ss_pred cEEEEecCCC
Q 001541 977 KMVVFVGESG 986 (1057)
Q Consensus 977 ~viaf~GD~~ 986 (1057)
+++= +||..
T Consensus 371 ~tLH-VGDQF 379 (408)
T PF06437_consen 371 ETLH-VGDQF 379 (408)
T ss_pred ceee-ehhhh
Confidence 9998 88753
|
; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process |
| >KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=83.35 E-value=6.4 Score=47.33 Aligned_cols=178 Identities=13% Similarity=0.112 Sum_probs=119.8
Q ss_pred hCCCCCcEEEEEeCCCCCCCHHHHHHHHHhcccccCCCcEEEEEecCCCCcccchhhHHHHHHHHHHHHHcCCCC-CEEe
Q 001541 470 FTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG-QVAY 548 (1057)
Q Consensus 470 ~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~l~~l~~~~~l~~-~V~f 548 (1057)
..+.+..++..+-.+ .|==+..++.+..+.. .-|+-+|++=.-|.-- ..++++.+..+|+.+ +|.|
T Consensus 754 ~Lp~d~vvf~~FNqL--yKidP~~l~~W~~ILk--~VPnS~LwllrfPa~g---------e~rf~ty~~~~Gl~p~riif 820 (966)
T KOG4626|consen 754 GLPEDAVVFCNFNQL--YKIDPSTLQMWANILK--RVPNSVLWLLRFPAVG---------EQRFRTYAEQLGLEPDRIIF 820 (966)
T ss_pred CCCCCeEEEeechhh--hcCCHHHHHHHHHHHH--hCCcceeEEEeccccc---------hHHHHHHHHHhCCCccceee
Confidence 334444555555554 3333566677766653 3344444332222111 156888899999975 6888
Q ss_pred CCCCCCCcHHHHHHHhhcCCcEEEEcCCCCCCCHHHHHHHHcCCcEEEcC-------CCCchhhhhcCCceEEeCCCCHH
Q 001541 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-------NGGPVDIHRVLDNGLLVDPHDQQ 621 (1057)
Q Consensus 549 ~g~v~~~dl~~ly~~Aa~~~dv~v~ps~~Egfgl~~lEAmA~G~PVVat~-------~Gg~~eiv~~~~~Gllv~p~d~~ 621 (1057)
..-...+|=..-++.| ||++-+++.-|- .|-.|.+.+|+|+|.-. +++. ++...+.|-++- .+.+
T Consensus 821 s~va~k~eHvrr~~La----Dv~LDTplcnGh-TTg~dvLw~GvPmVTmpge~lAsrVa~S--ll~~~Gl~hlia-k~~e 892 (966)
T KOG4626|consen 821 SPVAAKEEHVRRGQLA----DVCLDTPLCNGH-TTGMDVLWAGVPMVTMPGETLASRVAAS--LLTALGLGHLIA-KNRE 892 (966)
T ss_pred ccccchHHHHHhhhhh----hhcccCcCcCCc-ccchhhhccCCceeecccHHHHHHHHHH--HHHHcccHHHHh-hhHH
Confidence 8887788888889999 999998876653 45678899999998743 2221 222233444442 4778
Q ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHh-h--cCCHHHHHHHHHHHHHccc
Q 001541 622 SVADALLKLVADKQLWARCRQNGLKNI-H--LFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 622 ~la~aI~~ll~d~~~~~~~~~~~~~~v-~--~fsw~~~a~~~l~~~~~~~ 668 (1057)
+..+.-.++-.|.+..+.++..-++.. . .|+-..++..+.++|.++=
T Consensus 893 EY~~iaV~Latd~~~L~~lr~~l~~~r~~splfd~~q~~~~LE~~y~~MW 942 (966)
T KOG4626|consen 893 EYVQIAVRLATDKEYLKKLRAKLRKARASSPLFDTKQYAKGLERLYLQMW 942 (966)
T ss_pred HHHHHHHHhhcCHHHHHHHHHHHHHHhcCCCccCchHHHHHHHHHHHHHH
Confidence 888877788889888888888877765 2 7999999999999998653
|
|
| >PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=83.31 E-value=1 Score=44.17 Aligned_cols=118 Identities=20% Similarity=0.122 Sum_probs=60.9
Q ss_pred CCcHHHHHHHHHHHHhcCCCeeeEEEEecCCCCCCCCCccCCcccccCCCCCCccccccCCCCCeEEEEccCC-Cccccc
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFG-PKDKYI 268 (1057)
Q Consensus 190 ~GG~~~~v~~LA~aLa~~Ggv~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~i~rip~~-p~~~~l 268 (1057)
++|...=...|+++|.++| |+|.+.|..... +.-+..|+.++.++.. +.....
T Consensus 8 t~Ghv~P~lala~~L~~rG--h~V~~~~~~~~~------------------------~~v~~~Gl~~~~~~~~~~~~~~~ 61 (139)
T PF03033_consen 8 TRGHVYPFLALARALRRRG--HEVRLATPPDFR------------------------ERVEAAGLEFVPIPGDSRLPRSL 61 (139)
T ss_dssp SHHHHHHHHHHHHHHHHTT---EEEEEETGGGH------------------------HHHHHTT-EEEESSSCGGGGHHH
T ss_pred ChhHHHHHHHHHHHHhccC--CeEEEeecccce------------------------ecccccCceEEEecCCcCcCccc
Confidence 7899999999999999999 999998774310 1112358888887765 111000
Q ss_pred ccccCCCChhHHHHHHHHHHHHHHHHHHhhhc-----CCCCCcceEEEEcCCCchHHHHHHHhcCCCCEEEEecCC
Q 001541 269 AKELLWPHIPEFVDGALNHIIRMSNVLGEQIG-----GGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSL 339 (1057)
Q Consensus 269 ~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~-----~~~~~~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l 339 (1057)
.....+..+... ...+.+..+.+.+... ......+|++.++. ....+..++..+++|.+.+....
T Consensus 62 ---~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~--~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 62 ---EPLANLRRLARL-IRGLEEAMRILARFRPDLVVAAGGYVADDVIIAAP--LAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp ---HHHHHHHCHHHH-HHHHHHHHHHHHHHHHCCCCHCTTTTECCEECHHH--HHTHHHHHHHHHTS-EEEEESSG
T ss_pred ---chhhhhhhHHHH-hhhhhHHHHHhhccCcchhhhccCcccchHHHhhh--hcCccceeEhhhCchHHHHhhCC
Confidence 000011111111 1122222233333210 11112355554433 34456778888999999887654
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B .... |
| >COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=83.27 E-value=2.2 Score=44.24 Aligned_cols=64 Identities=8% Similarity=0.106 Sum_probs=43.9
Q ss_pred ceEEEEEecCCCCC------------cchHHHHHHHHHHHhhhcCCCeEEEEECC-----CCHHH----------HHHHH
Q 001541 774 KHIFVISVDCDSTT------------GLLDATKKICEAVEKERTEGSIGFILSTS-----MTISE----------IHSFL 826 (1057)
Q Consensus 774 kkLi~~DiDGTL~~------------~i~~~t~~al~~l~~~~~~~gi~~vIaTG-----R~~~~----------i~~~l 826 (1057)
.++||+|-||||.. .+.+.+..+++++++. |..+|++|= |.+.. +...|
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~----gy~lVvvTNQsGi~rgyf~~~~f~~~~~~m~~~l 80 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRA----GYKLVVVTNQSGIGRGYFTEADFDKLHNKMLKIL 80 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhC----CCeEEEEECCCCccccCccHHHHHHHHHHHHHHH
Confidence 57999999999931 2446788999999876 899999884 54332 44566
Q ss_pred HhCCCCCCCCCeEEeCC
Q 001541 827 VSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 827 ~~lgl~~~~~D~lI~~n 843 (1057)
++.|+.. .+.++|-+
T Consensus 81 ~~~gv~i--d~i~~Cph 95 (181)
T COG0241 81 ASQGVKI--DGILYCPH 95 (181)
T ss_pred HHcCCcc--ceEEECCC
Confidence 7777532 23466643
|
|
| >PF04413 Glycos_transf_N: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); InterPro: IPR007507 This is a domain found in proteins that transfer activated sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides | Back alignment and domain information |
|---|
Probab=83.09 E-value=11 Score=39.59 Aligned_cols=72 Identities=8% Similarity=0.087 Sum_probs=31.5
Q ss_pred cceEEEEcCCCchHHHHHHHhcCCCCEEEEecCCchhhHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHhhcCCEEEecC
Q 001541 306 WPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITST 385 (1057)
Q Consensus 306 ~pDvIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~~~~~yk~~~ri~~E~~~l~~ad~Vi~~S 385 (1057)
+||++.......-.-....++..|+|+++.-=-+....+ ..|+..+.+ -+.++...|.|++.|
T Consensus 95 ~P~~~i~~EtElWPnll~~a~~~~ip~~LvNarls~~s~---------------~~~~~~~~~--~r~~l~~f~~i~aqs 157 (186)
T PF04413_consen 95 RPDLLIWVETELWPNLLREAKRRGIPVVLVNARLSERSF---------------RRYRRFPFL--FRPLLSRFDRILAQS 157 (186)
T ss_dssp --SEEEEES----HHHHHH-----S-EEEEEE-----------------------------HH--HHHHGGG-SEEEESS
T ss_pred CCCEEEEEccccCHHHHHHHhhcCCCEEEEeeeeccccc---------------hhhhhhHHH--HHHHHHhCCEEEECC
Confidence 499888866543333344556779998764433322111 112222222 345789999999999
Q ss_pred HHHHHHHHh
Q 001541 386 RQEIEEQWR 394 (1057)
Q Consensus 386 ~~~~~~~~~ 394 (1057)
+...+.+..
T Consensus 158 ~~da~r~~~ 166 (186)
T PF04413_consen 158 EADAERFRK 166 (186)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHH
Confidence 998887654
|
Proteins bearing this domain transfer UDP, ADP, GDP or CMP linked sugars. This region is flanked at the N terminus by a signal peptide and at the C terminus by a glycosyl transferase group 1 domain (IPR001296 from INTERPRO). The eukaryotic glycogen synthases may be distant members of this bacterial family [].; GO: 0005529 sugar binding, 0016740 transferase activity, 0005975 carbohydrate metabolic process; PDB: 2XCI_A 2XCU_B. |
| >TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC | Back alignment and domain information |
|---|
Probab=82.90 E-value=3.1 Score=50.61 Aligned_cols=54 Identities=11% Similarity=0.122 Sum_probs=46.1
Q ss_pred ceEEEEEecCCC------CCcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 774 KHIFVISVDCDS------TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 774 kkLi~~DiDGTL------~~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
.+.+++.+|+++ ...+.+.+.++++++++. |+.+++.||-+...+..+.+++|+
T Consensus 327 ~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~----gi~~~~ltGD~~~~a~~ia~~lgi 386 (499)
T TIGR01494 327 LRVLAVASKETLLGLLGLEDPLRDDAKETISELREA----GIRVIMLTGDNVLTAKAIAKELGI 386 (499)
T ss_pred CEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHC----CCeEEEEcCCCHHHHHHHHHHcCc
Confidence 456777888877 367788999999999986 899999999999999999998874
|
The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily. |
| >PLN02940 riboflavin kinase | Back alignment and domain information |
|---|
Probab=82.35 E-value=1.8 Score=50.68 Aligned_cols=44 Identities=7% Similarity=0.221 Sum_probs=31.3
Q ss_pred HHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHH-hCCCCCCCCCeEEeCC
Q 001541 795 KICEAVEKERTEGSIGFILSTSMTISEIHSFLV-SGHLSPSDFDAFICNS 843 (1057)
Q Consensus 795 ~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~-~lgl~~~~~D~lI~~n 843 (1057)
+.|+.|+++ |+.++|+|+.+...+...++ ..++. ..||.++|+.
T Consensus 100 elL~~Lk~~----g~~l~IvTn~~~~~~~~~l~~~~gl~-~~Fd~ii~~d 144 (382)
T PLN02940 100 RLIKHLKSH----GVPMALASNSPRANIEAKISCHQGWK-ESFSVIVGGD 144 (382)
T ss_pred HHHHHHHHC----CCcEEEEeCCcHHHHHHHHHhccChH-hhCCEEEehh
Confidence 355666664 88999999998888888776 56763 2367777743
|
|
| >COG4359 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=81.92 E-value=3.2 Score=42.52 Aligned_cols=56 Identities=14% Similarity=0.046 Sum_probs=36.2
Q ss_pred cchHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCC----CCCCCCCeEEeCCCcEEEecc
Q 001541 788 GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGH----LSPSDFDAFICNSGSDLYYST 851 (1057)
Q Consensus 788 ~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lg----l~~~~~D~lI~~nGa~I~~~~ 851 (1057)
.+.+..++.++.++++ ++.|++.||=+-..+.++++.+. +. ..=|.+|-.+|+..+
T Consensus 73 ~Idp~fKef~e~ike~----di~fiVvSsGm~~fI~~lfe~ivgke~i~----~idi~sn~~~ih~dg 132 (220)
T COG4359 73 KIDPGFKEFVEWIKEH----DIPFIVVSSGMDPFIYPLFEGIVGKERIY----CIDIVSNNDYIHIDG 132 (220)
T ss_pred ccCccHHHHHHHHHHc----CCCEEEEeCCCchHHHHHHHhhcccccee----eeEEeecCceEcCCC
Confidence 3556677778888887 67666666666667788888776 32 123555666665543
|
|
| >TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245 | Back alignment and domain information |
|---|
Probab=80.67 E-value=3.8 Score=43.14 Aligned_cols=58 Identities=9% Similarity=0.116 Sum_probs=45.7
Q ss_pred cccCcceEEEEEecCCCCCc----------chHHHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCC
Q 001541 769 ALRRRKHIFVISVDCDSTTG----------LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 769 ~~~~~kkLi~~DiDGTL~~~----------i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl 831 (1057)
..+..||++|+|+|+||.+. .-+-+.+.|+.+.+ ...++|=|..+..-+...+.++++
T Consensus 16 ~~~~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-----~feIvVwTAa~~~ya~~~l~~l~~ 83 (195)
T TIGR02245 16 PPREGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-----DYDIVIWSATSMKWIEIKMTELGV 83 (195)
T ss_pred CCCCCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-----CCEEEEEecCCHHHHHHHHHHhcc
Confidence 33677899999999999421 23567888888886 477888888888888899998876
|
This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD. |
| >PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25) | Back alignment and domain information |
|---|
Probab=80.10 E-value=1.1 Score=48.73 Aligned_cols=55 Identities=9% Similarity=0.091 Sum_probs=42.0
Q ss_pred cceEEEEEecCCCC-----------------------------CcchHHHHHHHHHHHhhhcCCCeEEEEECCCCHH---
Q 001541 773 RKHIFVISVDCDST-----------------------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS--- 820 (1057)
Q Consensus 773 ~kkLi~~DiDGTL~-----------------------------~~i~~~t~~al~~l~~~~~~~gi~~vIaTGR~~~--- 820 (1057)
.+..|+||||+|+. ....+...+.++.+++. |+.|+++|||+-.
T Consensus 71 ~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~----G~~V~~iT~R~~~~r~ 146 (229)
T PF03767_consen 71 KPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSR----GVKVFFITGRPESQRE 146 (229)
T ss_dssp SEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHT----TEEEEEEEEEETTCHH
T ss_pred CCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHC----CCeEEEEecCCchhHH
Confidence 45689999999981 12223577899999987 9999999999765
Q ss_pred HHHHHHHhCCC
Q 001541 821 EIHSFLVSGHL 831 (1057)
Q Consensus 821 ~i~~~l~~lgl 831 (1057)
.....|...|+
T Consensus 147 ~T~~nL~~~G~ 157 (229)
T PF03767_consen 147 ATEKNLKKAGF 157 (229)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHcCC
Confidence 45567777787
|
The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A .... |
| >COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only] | Back alignment and domain information |
|---|
Probab=80.01 E-value=0.83 Score=52.28 Aligned_cols=78 Identities=17% Similarity=-0.007 Sum_probs=47.2
Q ss_pred CcCCcccCcceEEEEEecCCCCCcchH----------HHHHHHHHHHhhhcCCCeEEEEECCCCHHHHHHHHHhCCCCCC
Q 001541 765 AKFPALRRRKHIFVISVDCDSTTGLLD----------ATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPS 834 (1057)
Q Consensus 765 ~~~~~~~~~kkLi~~DiDGTL~~~i~~----------~t~~al~~l~~~~~~~gi~~vIaTGR~~~~i~~~l~~lgl~~~ 834 (1057)
++.-..+..+++|++|||||+++.--. -|-.-+.+|-.+....|..+..-|.|++..+..-..-+-
T Consensus 366 ~~ifvwr~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylr---- 441 (580)
T COG5083 366 MYIFVWRNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLR---- 441 (580)
T ss_pred EEEEEEeCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHH----
Confidence 444456778999999999999521111 111222333322222388999999999876543332222
Q ss_pred CCCeEEeCCCcEEEec
Q 001541 835 DFDAFICNSGSDLYYS 850 (1057)
Q Consensus 835 ~~D~lI~~nGa~I~~~ 850 (1057)
.||.||..+...
T Consensus 442 ----nieQngykLpdg 453 (580)
T COG5083 442 ----NIEQNGYKLPDG 453 (580)
T ss_pred ----hhhhcCccCCCC
Confidence 478888877654
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() | |
| Query | 1057 | ||||
| 2r60_A | 499 | Structure Of Apo Sucrose Phosphate Synthase (Sps) O | 1e-42 | ||
| 3s28_A | 816 | The Crystal Structure Of Sucrose Synthase-1 In Comp | 2e-28 | ||
| 3s27_A | 816 | The Crystal Structure Of Sucrose Synthase-1 From Ar | 1e-27 | ||
| 3c48_A | 438 | Structure Of The Retaining Glycosyltransferase Msha | 3e-10 | ||
| 3c4q_A | 426 | Structure Of The Retaining Glycosyltransferase Msha | 9e-10 | ||
| 2bis_A | 440 | Structure Of Glycogen Synthase From Pyrococcus Abys | 2e-05 | ||
| 3fro_A | 439 | Crystal Structure Of Pyrococcus Abyssi Glycogen Syn | 2e-05 | ||
| 3l01_A | 428 | Crystal Structure Of Monomeric Glycogen Synthase Fr | 4e-05 | ||
| 3mbo_A | 414 | Crystal Structure Of The Glycosyltransferase Babsha | 1e-04 | ||
| 2jjm_A | 394 | Crystal Structure Of A Family Gt4 Glycosyltransfera | 1e-04 |
| >pdb|2R60|A Chain A, Structure Of Apo Sucrose Phosphate Synthase (Sps) Of Halothermothrix Orenii Length = 499 | Back alignment and structure |
|
| >pdb|3S28|A Chain A, The Crystal Structure Of Sucrose Synthase-1 In Complex With A Breakdown Product Of The Udp-Glucose Length = 816 | Back alignment and structure |
|
| >pdb|3S27|A Chain A, The Crystal Structure Of Sucrose Synthase-1 From Arabidopsis Thaliana And Its Functional Implications. Length = 816 | Back alignment and structure |
|
| >pdb|3C48|A Chain A, Structure Of The Retaining Glycosyltransferase Msha: The First Step In Mycothiol Biosynthesis. Organism: Corynebacterium Glutamicum- Apo (Open) Structure. Length = 438 | Back alignment and structure |
|
| >pdb|3C4Q|A Chain A, Structure Of The Retaining Glycosyltransferase Msha : The First Step In Mycothiol Biosynthesis. Organism : Corynebacterium Glutamicum- Complex With Udp Length = 426 | Back alignment and structure |
|
| >pdb|2BIS|A Chain A, Structure Of Glycogen Synthase From Pyrococcus Abyssi Length = 440 | Back alignment and structure |
|
| >pdb|3FRO|A Chain A, Crystal Structure Of Pyrococcus Abyssi Glycogen Synthase With Open And Closed Conformations Length = 439 | Back alignment and structure |
|
| >pdb|3L01|A Chain A, Crystal Structure Of Monomeric Glycogen Synthase From Pyrococcus Abyssi Length = 428 | Back alignment and structure |
|
| >pdb|3MBO|A Chain A, Crystal Structure Of The Glycosyltransferase Babsha Bound With Udp And L-Malate Length = 414 | Back alignment and structure |
|
| >pdb|2JJM|A Chain A, Crystal Structure Of A Family Gt4 Glycosyltransferase From Bacillus Anthracis Orf Ba1558. Length = 394 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 1057 | |||
| 2r60_A | 499 | Glycosyl transferase, group 1; rossmann-fold; 1.80 | 1e-174 | |
| 3s28_A | 816 | Sucrose synthase 1; glycosyltransferase, sucrose m | 1e-166 | |
| 3c48_A | 438 | Predicted glycosyltransferases; retaining glycosyl | 1e-90 | |
| 2iw1_A | 374 | Lipopolysaccharide core biosynthesis protein RFAG; | 6e-33 | |
| 2jjm_A | 394 | Glycosyl transferase, group 1 family protein; anth | 2e-32 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 1e-27 | |
| 3okp_A | 394 | GDP-mannose-dependent alpha-(1-6)-phosphatidylino | 1e-27 | |
| 2x6q_A | 416 | Trehalose-synthase TRET; biosynthetic protein; 2.2 | 1e-27 | |
| 2gek_A | 406 | Phosphatidylinositol mannosyltransferase (PIMA); G | 2e-25 | |
| 2f9f_A | 177 | First mannosyl transferase (WBAZ-1); alpha-beta pr | 5e-23 | |
| 2x0d_A | 413 | WSAF; GT4 family, transferase; HET: MSE; 2.28A {Ge | 4e-19 | |
| 3oy2_A | 413 | Glycosyltransferase B736L; rossmann fold, GDP-mann | 7e-17 | |
| 2iuy_A | 342 | Avigt4, glycosyltransferase; antibiotics, family G | 4e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 5e-08 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 2e-07 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 3e-04 | |
| 1vt4_I | 1221 | APAF-1 related killer DARK; drosophila apoptosome, | 6e-04 | |
| 1s2o_A | 244 | SPP, sucrose-phosphatase; phosphohydrolase, HAD su | 6e-06 | |
| 3nb0_A | 725 | Glycogen [starch] synthase isoform 2; glycogen syn | 6e-06 | |
| 2bfw_A | 200 | GLGA glycogen synthase; glycosyltransferase family | 2e-05 | |
| 3gyg_A | 289 | NTD biosynthesis operon putative hydrolase NTDB; P | 1e-04 |
| >2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A* Length = 499 | Back alignment and structure |
|---|
Score = 518 bits (1336), Expect = e-174
Identities = 151/555 (27%), Positives = 240/555 (43%), Gaps = 72/555 (12%)
Query: 161 QKGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQV 220
+ + ++ ++ G + D GGQ+ YV E++ AL M +VD++TR++
Sbjct: 3 EMTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMG--VQVDIITRRI 60
Query: 221 SAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEF 280
+ GE D E++ I+RIPFG DK++ KE LWP++ E+
Sbjct: 61 KDENWPEFSGEI-------------DYYQETNKVRIVRIPFGG-DKFLPKEELWPYLHEY 106
Query: 281 VDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLG 340
V+ +N +P + HY D G + LL +P FTGHSLG
Sbjct: 107 VNKIINFYREE------------GKFPQVVTTHYGDGGLAGVLLKNIKGLPFTFTGHSLG 154
Query: 341 RDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR--LYDG 398
K+E+L + E++ +K RRI AE L++ ++ +I ST QE Q+ LY G
Sbjct: 155 AQKMEKLNVNTS-NFKEMDERFKFHRRIIAERLTMSYADKIIVSTSQERFGQYSHDLYRG 213
Query: 399 FDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASP 458
V + + ++IPPG+ + GD
Sbjct: 214 AVNVEDD-----------------DKFSVIPPGVNTRVFDGEYGD-------------KI 243
Query: 459 DPPIWSEIMRFFTNPR--KPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNR 516
I + R + R P I+A +R D KKN LV+A+ + + L++ ANL L +
Sbjct: 244 KAKITKYLERDLGSERMELPAIIASSRLDQKKNHYGLVEAYVQNKELQDKANLVLTLRGI 303
Query: 517 DG----IDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 572
+ +L +++LID D G+V+ + Q ++ Y A VF
Sbjct: 304 ENPFEDYSRAGQEEKEILGKIIELIDNNDCRGKVSMFPLNSQQELAGCYAYLASKGSVFA 363
Query: 573 NPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA 632
+F EPFGL +EA A GLP V T+NGGP +I G+LVDP D + +A LLK
Sbjct: 364 LTSFYEPFGLAPVEAMASGLPAVVTRNGGPAEILDGGKYGVLVDPEDPEDIARGLLKAFE 423
Query: 633 DKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCKPRHPQWQRNDDGGETSESDSPGD 691
++ W+ ++ G + + ++W E + YL I R + +PG
Sbjct: 424 SEETWSAYQEKGKQRVEERYTWQETARGYLEVIQEIADRKDEEDEGGSLNIPDYFTNPGA 483
Query: 692 SLRDIQDISLNLKFS 706
S D L F+
Sbjct: 484 S----NDEKLLDTFN 494
|
| >3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A* Length = 816 | Back alignment and structure |
|---|
Score = 508 bits (1309), Expect = e-166
Identities = 148/627 (23%), Positives = 258/627 (41%), Gaps = 71/627 (11%)
Query: 86 ARQKKQLEGEAAQRMAKRRLERERGRREATADMSEDLSEG----------EKGDIVSDVS 135
+ K + E Q + + + SE L E E+G +
Sbjct: 189 HQGKNLMLSEKIQNLNTLQHTLRKAEEYLAELKSETLYEEFEAKFEEIGLERGW-GDNAE 247
Query: 136 AHGDSTRSRLPRISSVD--AMETWISQQKGKKLYIVLISIHGLIRGENMELGRDSDTGGQ 193
D R L + + D +ET++ + +V++S HG +N+ LG DTGGQ
Sbjct: 248 RVLDMIRLLLDLLEAPDPCTLETFLGRVP-MVFNVVILSPHGYFAQDNV-LGY-PDTGGQ 304
Query: 194 VKYVVELARALGSMPG----------VYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDD 243
V Y+++ RAL R+ +LTR + V + GE E +
Sbjct: 305 VVYILDQVRALEIEMLQRIKQQGLNIKPRILILTRLL-PDAVGTTCGERLERV------- 356
Query: 244 FMDDMGESSGAYIIRIPFGPK----DKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQI 299
+S I+R+PF + K+I++ +WP++ + + A + +
Sbjct: 357 -----YDSEYCDILRVPFRTEKGIVRKWISRFEVWPYLETYTEDAAVELSKEL------- 404
Query: 300 GGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEIN 359
P I G+Y+D A+LL+ L V H+L + K + + +++
Sbjct: 405 ----NGKPDLIIGNYSDGNLVASLLAHKLGVTQCTIAHALEKTKY----PDSDIYWKKLD 456
Query: 360 ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYG 419
Y + A+ +++ ++ +ITST QEI ++ + R V
Sbjct: 457 DKYHFSCQFTADIFAMNHTDFIITSTFQEIAGSKETVGQYESHTAFT-LPGLYRVVHGID 515
Query: 420 KFMPRMAIIPPGMEFHHIVPQDGDMDGETE-GNEDNPASPDPPIWSEIMRFFTNPRKPVI 478
F P+ I+ PG + P + T+ +E E + + +KP++
Sbjct: 516 VFDPKFNIVSPGADMSIYFPYTEEKRRLTKFHSEIEELLYSDVENKEHLCVLKDKKKPIL 575
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538
+AR D KN++ LV+ +G+ LRELANL ++ G+R + + A + + LI+
Sbjct: 576 FTMARLDRVKNLSGLVEWYGKNTRLRELANLVVVGGDRRKESKDNEEKA-EMKKMYDLIE 634
Query: 539 KYDLYGQVAY-PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVAT 597
+Y L GQ + + E+YR TKG F+ PA E FGLT++EA GLP AT
Sbjct: 635 EYKLNGQFRWISSQMDRVRNGELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGLPTFAT 694
Query: 598 KNGGPVDIHRVLDNGLLVDPHD----QQSVADALLKLVADKQLWARCRQNGLKNI-HLFS 652
GGP +I +G +DP+ ++AD K D W + GL+ I ++
Sbjct: 695 CKGGPAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCKEDPSHWDEISKGGLQRIEEKYT 754
Query: 653 WPEHCKTYLSRIAGCKPRHPQWQRNDD 679
W + + L+ + W+ +
Sbjct: 755 WQIYSQRLLT----LTGVYGFWKHVSN 777
|
| >3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A* Length = 438 | Back alignment and structure |
|---|
Score = 296 bits (759), Expect = 1e-90
Identities = 99/519 (19%), Positives = 174/519 (33%), Gaps = 102/519 (19%)
Query: 162 KGKKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVS 221
+G + + +IS+H ++ D+GG Y++ A L VD+ TR
Sbjct: 17 RGSHMRVAMISMHT----SPLQQPGTGDSGGMNVYILSTATELAKQG--IEVDIYTRATR 70
Query: 222 APDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFV 281
+ +I I GP + ++KE L + F
Sbjct: 71 PSQ------GEIVRVAE--------------NLRVINIAAGPYE-GLSKEELPTQLAAFT 109
Query: 282 DGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGR 341
G L+ R + V IH HY +G LL +P++ T H+L
Sbjct: 110 GGMLSFTRR------------EKVTYDLIHSHYWLSGQVGWLLRDLWRIPLIHTAHTLAA 157
Query: 342 DKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401
K T + R E+ +D ++++ +T++E+++ Y DP
Sbjct: 158 VKNSYRDDSD---------TPESEARRICEQQLVDNADVLAVNTQEEMQDLMHHY-DADP 207
Query: 402 VLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP 461
R++++ PG + P D
Sbjct: 208 ---------------------DRISVVSPGADVELYSP-----------------GNDRA 229
Query: 462 IWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGID 520
V+ + R P K L+KA NL + I G G +
Sbjct: 230 TERSRRELGIPLHTKVVAFVGRLQPFKGPQVLIKAVAALFDRDPDRNLRVIICGGPSGPN 289
Query: 521 EMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPF 580
+ + ++ + ++ + S++ +YR A + P+F E F
Sbjct: 290 ATPD-------TYRHMAEELGVEKRIRFLDPRPPSELVAVYRAA----DIVAVPSFNESF 338
Query: 581 GLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARC 640
GL +EA A G P++A + GG + GLLVD H + ADAL L+ D + R
Sbjct: 339 GLVAMEAQASGTPVIAARVGGLPIAVAEGETGLLVDGHSPHAWADALATLLDDDETRIRM 398
Query: 641 RQNGLKNIHLFSWPEHCKTYLS---RIAGCKPRHPQWQR 676
++ +++ FSW S + +
Sbjct: 399 GEDAVEHARTFSWAATAAQLSSLYNDAIANENVDGETHH 437
|
| >2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A* Length = 374 | Back alignment and structure |
|---|
Score = 130 bits (330), Expect = 6e-33
Identities = 66/468 (14%), Positives = 128/468 (27%), Gaps = 129/468 (27%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 250
GG + + +A + + G V + T+
Sbjct: 14 GGLQRDFMRIASTVAAR-GH-HVRVYTQSWEGDCPK------------------------ 47
Query: 251 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAI 310
+I++P + E+ NH+ +
Sbjct: 48 --AFELIQVPVKSHTNH-------GRNAEYYAWVQNHLKEHP--------------ADRV 84
Query: 311 HGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEA 370
G G + + RL+ Y+ E
Sbjct: 85 VGFNKMPGLDVYFAADVCYAEKVAQEKGFLY----------RLTS-----RYRHYAAFER 129
Query: 371 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPP 430
S ++ T ++I + + Y +P R I+PP
Sbjct: 130 ATFEQGKSTKLMMLTDKQIADFQKHY-QTEP---------------------ERFQILPP 167
Query: 431 GMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMR--FFTNPRKPVILALARPDPKK 488
G+ D S P EI R ++ ++L + +K
Sbjct: 168 GI------------------YPDRKYSEQIPNSREIYRQKNGIKEQQNLLLQVGSDFGRK 209
Query: 489 NITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAY 548
+ ++A N L + +D + L +K + V +
Sbjct: 210 GVDRSIEALASLPE-SLRHNTLLFVVGQDKPRKF-----------EALAEKLGVRSNVHF 257
Query: 549 PKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV 608
++DV E+ A + ++PA+ E G+ L+EA GLP++ T G +
Sbjct: 258 FSG--RNDVSELMAAAD----LLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHY--I 309
Query: 609 LD--NGLLV-DPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSW 653
D G ++ +P Q+ + + L K + L +N
Sbjct: 310 ADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYADTQDL 357
|
| >2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A* Length = 394 | Back alignment and structure |
|---|
Score = 129 bits (326), Expect = 2e-32
Identities = 65/479 (13%), Positives = 145/479 (30%), Gaps = 134/479 (27%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 250
GG EL + L G + + +T +
Sbjct: 27 GGSGVVGTELGKQLAER-G-HEIHFITSGLPFRLNK-----------------------V 61
Query: 251 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKP-VWPVA 309
Y + F + + +++ + E +
Sbjct: 62 YPNIYFHEVTV-------------NQYSVFQYPPYD--LALASKMAEVAQRENLDI---- 102
Query: 310 IHGHYADAGDSAALLSGAL---NVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMR 366
+H HYA A L+ + + ++ T H +I
Sbjct: 103 LHVHYAIPHAICAYLAKQMIGERIKIVTTLHGT-----------------DITVLGSDPS 145
Query: 367 RIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMA 426
++ S++V + I E L +
Sbjct: 146 LNNLIRFGIEQSDVVTAVSHSLINETHELVKPNK-----------------------DIQ 182
Query: 427 IIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDP 486
+ ++ +D + + + + +++ ++
Sbjct: 183 TVYNFIDERVYFKRDMTQLKK--------------------EYGISESEKILIHISNFRK 222
Query: 487 KKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ 545
K + +V+AF + + + L++ G DG E ++L+L+ + +
Sbjct: 223 VKRVQDVVQAFAK---IVTEVDAKLLLVG--DG-PEFC--------TILQLVKNLHIEDR 268
Query: 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDI 605
V + KQ +V E+ ++ + + + E FGL L+EA A G+P + T+ GG ++
Sbjct: 269 VLF--LGKQDNVAELLAMSD----LMLLLSEKESFGLVLLEAMACGVPCIGTRVGGIPEV 322
Query: 606 HRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH-LFSWPEHCKTYL 661
+ G L + D VAD ++L+ D++L + ++++ F + Y
Sbjct: 323 --IQHGDTGYLCEVGDTTGVADQAIQLLKDEELHRNMGERARESVYEQFRSEKIVSQYE 379
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} Length = 166 | Back alignment and structure |
|---|
Score = 109 bits (274), Expect = 1e-27
Identities = 31/181 (17%), Positives = 71/181 (39%), Gaps = 26/181 (14%)
Query: 476 PVILALARPDPKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVL 534
I + R +KN + L+KA + ++ L + G G DE +
Sbjct: 3 FKIAMVGRYSNEKNQSVLIKAVAL---SKYKQDIVLLLKG--KGPDE----------KKI 47
Query: 535 K-LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL- 592
K L K + + + +++ EI + ++++ A +E + +EA + G+
Sbjct: 48 KLLAQKLGVKAEFGFVNS---NELLEILKTCT----LYVHAANVESEAIACLEAISVGIV 100
Query: 593 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFS 652
P++A LD L +P++ + ++ + + +K R + K+ ++
Sbjct: 101 PVIANSPLSATRQF-ALDERSLFEPNNAKDLSAKIDWWLENKLERERMQNEYAKSALNYT 159
Query: 653 W 653
Sbjct: 160 L 160
|
| >3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A* Length = 394 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 1e-27
Identities = 73/500 (14%), Positives = 145/500 (29%), Gaps = 143/500 (28%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 250
GG Y+ + + + +A + + +
Sbjct: 19 GGIQSYLRDFIATQDPE----SIVVFASTQNAEE-----AHAYD---------------K 54
Query: 251 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAI 310
+ +IR P +L A+ IIR +
Sbjct: 55 TLDYEVIRWPRSV--------MLPTP---TTAHAMAEIIRERE-------------IDNV 90
Query: 311 HGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIE 369
A A A ++ + H + + + + +R+I
Sbjct: 91 WFGAAAPLALMAGTAKQAGASKVIASTHG------------HEVGWSMLPGSRQSLRKI- 137
Query: 370 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 429
+++ ++ + + P +P
Sbjct: 138 -----GTEVDVLTYISQYTLRRFKSAFGS-----------------------HPTFEHLP 169
Query: 430 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKN 489
G+ D+ PA+P+ + + PVI +R P+K
Sbjct: 170 SGV----------DVK------RFTPATPEDK-SATRKKLGFTDTTPVIACNSRLVPRKG 212
Query: 490 ITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 549
+L+KA + R A L LI+G+ + + V +V G++ Y
Sbjct: 213 QDSLIKAMPQVIAARPDAQL-LIVGSGRYESTLRRLATDVSQNVK-------FLGRLEYQ 264
Query: 550 KHHKQSDVPEIYRLAAKTKGVFINPAFI-------EPFGLTLIEAAAHGLPIVATKNGGP 602
D+ A +F PA E G+ +EA A G+P++A +GG
Sbjct: 265 ------DMINTLAAAD----IFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGA 314
Query: 603 VDIHRVLD-NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIH-LFSWP------ 654
+ V GL+V+ D +++ L++L+ D A G ++ +SW
Sbjct: 315 PET--VTPATGLVVEGSDVDKLSELLIELLDDPIRRAAMGAAGRAHVEAEWSWEIMGERL 372
Query: 655 -EHCKTYLSRIAGCKPRHPQ 673
++ ++A H
Sbjct: 373 TNILQSEPRKLAAALEHHHH 392
|
| >2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A* Length = 416 | Back alignment and structure |
|---|
Score = 115 bits (290), Expect = 1e-27
Identities = 51/273 (18%), Positives = 100/273 (36%), Gaps = 44/273 (16%)
Query: 403 LERKLRARIKRNVSCYGKFMP------RMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPA 456
R+ + R + +++ + I+PP I P E N
Sbjct: 168 FLRRFVEKYDRYIFHLPEYVQPELDRNKAVIMPPS-----IDPLS----------EKNVE 212
Query: 457 SPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM--- 513
I + RF +P KP+I ++R DP K I +++ + + + ++ + L++
Sbjct: 213 LKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVK--EKIPGVQLLLVGV 270
Query: 514 GNRDGIDEMSSTSASVLLSVLK-LIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFI 572
D + L+ + + YD+ H + +V R + V +
Sbjct: 271 MAHDDPEG-----WIYFEKTLRKIGEDYDVKVLTNLIGVHAR-EVNAFQRASD----VIL 320
Query: 573 NPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHDQQSVADALLKL 630
+ E FGLT+ EA G P++ GG ++D G LV + + +L L
Sbjct: 321 QMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQ--IVDGETGFLVRDAN--EAVEVVLYL 376
Query: 631 VADKQLWARCRQNGLKNIH-LFSWPEHCKTYLS 662
+ ++ + + F +H + YL
Sbjct: 377 LKHPEVSKEMGAKAKERVRKNFIITKHMERYLD 409
|
| >2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A* Length = 406 | Back alignment and structure |
|---|
Score = 108 bits (273), Expect = 2e-25
Identities = 79/472 (16%), Positives = 126/472 (26%), Gaps = 144/472 (30%)
Query: 191 GGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGE 250
GG +V++LA L G V +L + + +
Sbjct: 35 GGVQSHVLQLAEVLRDA-GH-EVSVLAP-------ASPHVKLPD--------------YV 71
Query: 251 SSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKP-VWPVA 309
SG + IP+ L + + I G V
Sbjct: 72 VSGGKAVPIPYNGSVAR-----------------LRFGPATHRKVKKWIAEGDFDV---- 110
Query: 310 IHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIE 369
+H H +A + L A P++ T H+ + + I+R
Sbjct: 111 LHIHEPNAPSLSMLALQAAEGPIVATFHTSTTKS-----LTLSVFQG-------ILRPYH 158
Query: 370 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 429
+ + V R+ E IP
Sbjct: 159 EK---IIGRIAVSDLARRWQMEALG----------------------------SDAVEIP 187
Query: 430 PGM---EFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD- 485
G+ F A +L L R D
Sbjct: 188 NGVDVASFA-------------------DAPLLDGY---------PREGRTVLFLGRYDE 219
Query: 486 PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQ 545
P+K + L+ A + + LI+G G + L GQ
Sbjct: 220 PRKGMAVLLAALPKLVARFPDVEI-LIVG--RG------DEDELREQAGDLAGHLRFLGQ 270
Query: 546 VAYPKHHKQSDVPEIYRLAAKTKGVFINPAF-IEPFGLTLIEAAAHGLPIVATKNGGPVD 604
V + R A V+ P E FG+ L+EA A G +VA+
Sbjct: 271 VD------DATKASAMRSAD----VYCAPHLGGESFGIVLVEAMAAGTAVVASDLDAFRR 320
Query: 605 IHRVLD--NGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWP 654
+ + D G LV D +A AL+ ++ D QL A + +H + W
Sbjct: 321 V--LADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWS 370
|
| >2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8 Length = 177 | Back alignment and structure |
|---|
Score = 96.5 bits (241), Expect = 5e-23
Identities = 42/195 (21%), Positives = 77/195 (39%), Gaps = 30/195 (15%)
Query: 460 PPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-GNRDG 518
P+ E +F L++ R P+K I ++ F ++L + L + G
Sbjct: 10 HPV--ETSKFKFKCYGDFWLSVNRIYPEKRIELQLEVF------KKLQDEKLYIVGWFSK 61
Query: 519 IDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIE 578
D + ++ D G V + ++ ++Y K + A E
Sbjct: 62 GDHAERYARKIMKIAP---DNVKFLGSV------SEEELIDLYS-RCK---GLLCTAKDE 108
Query: 579 PFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD--NGLLVDPHDQQSVADALLKLVADKQL 636
FGLT IEA A G P++A GG + V++ G LV+ D + DA+ K+ +
Sbjct: 109 DFGLTPIEAMASGKPVIAVNEGGFKET--VINEKTGYLVNA-DVNEIIDAMKKVSKNPD- 164
Query: 637 WARCRQNGLKNIHLF 651
+ +++ + F
Sbjct: 165 --KFKKDCFRRAKEF 177
|
| >2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A* Length = 413 | Back alignment and structure |
|---|
Score = 90.2 bits (223), Expect = 4e-19
Identities = 25/199 (12%), Positives = 68/199 (34%), Gaps = 24/199 (12%)
Query: 460 PPIWSEIMRFFTNPR--KPVILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNR 516
P I + + + + R + +IL RP + T +V+A + +N I+
Sbjct: 224 PKINTTLKNYINDKRQKEKIILVYGRPSVKRNAFTLIVEALKIFVQKYDRSNEWKIISVG 283
Query: 517 DGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF 576
+ ++ L + G++ D ++ + ++ + I+
Sbjct: 284 EKHKDI----------ALGKGIHLNSLGKLT------LEDYADLLKRSS----IGISLMI 323
Query: 577 IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQL 636
+E A GL ++ D+ N + ++ + +++A+ L++L
Sbjct: 324 SPHPSYPPLEMAHFGLRVITN-KYENKDLSNWHSNIVSLEQLNPENIAETLVELCMSFNN 382
Query: 637 WARCRQNGLKNIHLFSWPE 655
++ + +
Sbjct: 383 RDVDKKESSNMMFYINEFN 401
|
| >3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A* Length = 413 | Back alignment and structure |
|---|
Score = 83.3 bits (205), Expect = 7e-17
Identities = 37/270 (13%), Positives = 68/270 (25%), Gaps = 37/270 (13%)
Query: 414 NVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNP 473
V K +IV D +++
Sbjct: 136 GVMAMSKCWISDICNYGCKVPINIVSHFVDTK-------------TIYDARKLVGLSEYN 182
Query: 474 RKPVILALARPDPKKNITTLVKAFGECRPLRELANLT-LIMGNRDGIDEMSSTSASVLLS 532
+ L + R +K + V A A + L + + ++ S + L++
Sbjct: 183 DDVLFLNMNRNTARKRLDIYVLAAARFISKYPDAKVRFLCNSHHESKFDLHSIALRELVA 242
Query: 533 VLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGL 592
L + V +Y V +N + E FGL E A G
Sbjct: 243 SGVDNVFTHLNKIMINRTVLTDERVDMMYNACD----VIVNCSSGEGFGLCSAEGAVLGK 298
Query: 593 PIVATKNGGPVDIHRVLDNGLLVDPHDQQSVAD-----------------ALLKLVADKQ 635
P++ + GG D D + P SV D D++
Sbjct: 299 PLIISAVGGADDYFS-GDCVYKIKPSAWISVDDRDGIGGIEGIIDVDDLVEAFTFFKDEK 357
Query: 636 LWARCRQNGLKNIH-LFSWPEHCKTYLSRI 664
+ + +W + +
Sbjct: 358 NRKEYGKRVQDFVKTKPTWDDISSDIIDFF 387
|
| >2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A* Length = 342 | Back alignment and structure |
|---|
Score = 55.5 bits (134), Expect = 4e-08
Identities = 25/188 (13%), Positives = 52/188 (27%), Gaps = 33/188 (17%)
Query: 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-GNRDGIDEMSSTSASVLL 531
++ +L + R P K L++ G + +
Sbjct: 160 AKEDFLLFMGRVSPHKGALEAAAFA-------HACGRRLVLAGPAWEPEYFDEITR---- 208
Query: 532 SVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAA------KTKGVFINPAFIEPFGLTLI 585
+ + G+V ++ A + + EP +
Sbjct: 209 ---RYGSTVEPIGEVG------GERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVS 259
Query: 586 EAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGL 645
EAA G P+V T NG + ++ + V + D + +A R+
Sbjct: 260 EAAVSGTPVVGTGNGCLAE---IVPSVGEVVGYGTDFAPDEARRTLAGLPASDEVRR--- 313
Query: 646 KNIHLFSW 653
+ L+
Sbjct: 314 AAVRLWGH 321
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 5e-08
Identities = 71/493 (14%), Positives = 155/493 (31%), Gaps = 156/493 (31%)
Query: 214 DLLTRQVSAPDVDWSYGEPTE----------MLTPRNS--DDFMDDMGESSGAYII---- 257
D+ +S ++D +L+ + F++++ + +++
Sbjct: 40 DMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIK 99
Query: 258 ---RIPFGPKDKYI-AKELLWPHIPEFVDGALN---HIIRMSNVLGEQIGGGKPVWPVAI 310
R P YI ++ L+ F ++ +++ L E +P V I
Sbjct: 100 TEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLEL----RPAKNVLI 155
Query: 311 HGHYADAGDS----AALLSGALNVPMLFTGH--SLGR--------DKLEQLLKQARLS-- 354
G +G + LS + M F +L + L++LL Q +
Sbjct: 156 DG-VLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWT 214
Query: 355 ---------RDEINATYKIMRRIEAEE------LSLD-------------ASEIVITSTR 386
+ I++ +RR+ + L L + +I++T TR
Sbjct: 215 SRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLT-TR 273
Query: 387 Q---------EIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHI 437
L + ++++ + + + C + +PR E
Sbjct: 274 FKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR--------EVLTT 325
Query: 438 VPQDGDMDGETEGNEDNPASPDPPIW--------SEIMRFFTNPRKPVI-------LALA 482
P+ + E+ D A+ D W + I+ N +P L++
Sbjct: 326 NPRRLSIIAESI--RDGLATWDN--WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381
Query: 483 RPDPKKNITTLV-------KAFGECRP-LRELANLTLIMGNRDGIDEMSSTSASVLLSVL 534
P +I T++ + + +L +L+ + E + + S+ L +
Sbjct: 382 PPS--AHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLV--EKQP-KESTISIPSIYLELK 436
Query: 535 -----------KLIDKYDL------------------YGQVAYPKHHKQSDVPEIYRLAA 565
++D Y++ Y + + H K + PE L
Sbjct: 437 VKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGH--HLKNIEHPERMTLFR 494
Query: 566 KTKGVFINPAFIE 578
VF++ F+E
Sbjct: 495 M---VFLDFRFLE 504
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 56.4 bits (135), Expect = 5e-08
Identities = 95/670 (14%), Positives = 173/670 (25%), Gaps = 211/670 (31%)
Query: 341 RDKLEQLLKQARLSRD-EINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGF 399
+D L + + + + I ++E + I+++ + RL+
Sbjct: 19 KDILSVFEDA--FVDNFDCKDVQDMPKSILSKE---EIDHIIMSKDA--VSGTLRLFW-- 69
Query: 400 DPVLERKLRARIKRNVSC-----YGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDN 454
L K +++ V Y M + + M + +
Sbjct: 70 --TLLSKQEEMVQKFVEEVLRINYKFLMSPI----------KTEQRQPSMMTRMYIEQRD 117
Query: 455 PASPDPPIWSEIMRFFTNPRKPVIL----ALARPDPKKNI----------TTLVKAFGEC 500
D ++++ + R L AL P KN+ T + C
Sbjct: 118 RLYNDNQVFAK----YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDV--C 171
Query: 501 RPLRELANLT-----LIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQS 555
+ + L + N + + +L +L+ L Q+ P +S
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPET--------VLEMLQ-----KLLYQID-PNWTSRS 217
Query: 556 DVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV 615
D +L I+ L++ + +N LLV
Sbjct: 218 DHSSNIKL---------RIHSIQAELRRLLK-------------------SKPYENCLLV 249
Query: 616 DPHDQQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYL-SR-------IAGC 667
L V + + W F+ CK L +R ++
Sbjct: 250 ------------LLNVQNAKAWN-----------AFNL--SCKILLTTRFKQVTDFLSAA 284
Query: 668 KPRHPQWQRNDDGGETSESDS---------PGDSLRDIQDISLNLKFSLDGEKSGASGND 718
H + E S P D R++ + + S+ E
Sbjct: 285 TTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-RRLSIIAES------- 336
Query: 719 DSLDSEGNVADRKSRLENAVLAWSK---GVLKDTRKSGSTDKVDQNTGAAKFPALRRR-- 773
+ D + +N W L +S S + ++ PA R+
Sbjct: 337 --------IRDGLATWDN----WKHVNCDKLTTIIES-SLNVLE--------PAEYRKMF 375
Query: 774 KHIFVISVDCDSTTGLL-----DATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVS 828
+ V T LL D K V + + S+ TIS I S +
Sbjct: 376 DRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTIS-IPSIYLE 434
Query: 829 GHLSPSD--------FDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEY--------- 871
+ + D + D D Y++SHI +
Sbjct: 435 LKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQ------YFYSHIGHHLKNIEHPE 488
Query: 872 RWGGEGLRKTLV--RWASQVTDKKAESGEKVLTPAEQLST-----NYCYAFSVQKPGMTP 924
R R + R+ Q K L+T Y P
Sbjct: 489 RM--TLFRMVFLDFRFLEQ---KIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYER 543
Query: 925 PVKELRKVLR 934
V + L
Sbjct: 544 LVNAILDFLP 553
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 54.5 bits (130), Expect = 2e-07
Identities = 76/482 (15%), Positives = 141/482 (29%), Gaps = 158/482 (32%)
Query: 18 GPGLDDAKSSL---LLRERGRFSPTRYFVEEVITGFDETDLHRSWVKAQATRSPQERNTR 74
G G K+ + + + ++ F W+ + SP+
Sbjct: 160 GSG----KTWVALDVCLS---YKVQCKMDFKI---F--------WLNLKNCNSPETVLEM 201
Query: 75 LENMCWRI-WNLARQKKQ-----LEGEAAQRMAKRRLERERGRREATADMSEDLSEGEKG 128
L+ + ++I N + L + Q RRL + + L
Sbjct: 202 LQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA-ELRRLLKSKPYENC-------L------ 247
Query: 129 DIVSDVSAHGDS---------------TRSRLPRISSVDAMETWISQQKGKKLYIVLISI 173
++ +V ++ TR + D +S + + S
Sbjct: 248 LVLLNVQ---NAKAWNAFNLSCKILLTTRFK----QVTDF----LSAATTTHISLDHHS- 295
Query: 174 HGLIRGENMELGRDSDTGGQVKYV----VELAR-ALGSMPGV-------YRVDLLT---- 217
L E L +KY+ +L R L + P R L T
Sbjct: 296 MTLTPDEVKSL--------LLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNW 347
Query: 218 RQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYI-AK--ELLW 274
+ V+ + +L P D + + F P +I L+W
Sbjct: 348 KHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS------V----F-PPSAHIPTILLSLIW 396
Query: 275 PH-IPEFVDGALNHIIRMSNVLGEQIGGGKPVWP----VAIHGHYAD----AGDSAAL-- 323
I V +N + + S L E+ P ++I Y + + AL
Sbjct: 397 FDVIKSDVMVVVNKLHKYS--LVEK-------QPKESTISIPSIYLELKVKLENEYALHR 447
Query: 324 -LSGALNVPMLFTGHSLGRDKLEQL--------LKQARLSR--DEINATYK----IMRRI 368
+ N+P F L L+Q LK + + ++I
Sbjct: 448 SIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKI 507
Query: 369 EAEELSLDASEIVITSTRQEIEEQWRLYDGF----DPVLERKLRARIKRNVSCYGKFMPR 424
+ + +AS I +T Q++ + Y + DP ER + A F+P+
Sbjct: 508 RHDSTAWNASG-SILNTLQQL----KFYKPYICDNDPKYERLVNA--------ILDFLPK 554
Query: 425 MA 426
+
Sbjct: 555 IE 556
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 44.1 bits (103), Expect = 3e-04
Identities = 70/471 (14%), Positives = 131/471 (27%), Gaps = 150/471 (31%)
Query: 204 LGSMPGVYRVDLLT--RQVSAPDVDWSYGE--PTEMLTPRNSDDFMDDMGESSGAYIIRI 259
G Y+ D+L+ + D + P +L+ D + SG +
Sbjct: 11 TGEHQYQYK-DILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFW 69
Query: 260 PFGPKDKYIAKELLWPHIPEFVDGAL--NHIIRMSNVLGEQIGGGKPVWPVAIHGHYADA 317
K + + ++ FV+ L N+ MS + EQ P + Y +
Sbjct: 70 TLLSKQEEMVQK--------FVEEVLRINYKFLMSPIKTEQRQ------PSMMTRMYIEQ 115
Query: 318 GDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLS-RDEIN----------------- 359
D N +F +++ R + L+QA L R N
Sbjct: 116 RDRL------YNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALD 169
Query: 360 --ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSC 417
+YK+ +++ + L+ S +E +L DP
Sbjct: 170 VCLSYKVQCKMDFKIFWLNLKN--CNSPETVLEMLQKLLYQIDPNWTS------------ 215
Query: 418 YGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWS---EIMRFFTNPR 474
D+ ++ I S E+ R +
Sbjct: 216 ---------------------------------RSDHSSNIKLRIHSIQAELRRLLKSKP 242
Query: 475 KP---VILALARPDPKKNI--TTLVKAFG-ECRPL---RELANLTLIMGNRDG---IDEM 522
++L N+ AF C+ L R + +D
Sbjct: 243 YENCLLVL-----L---NVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHH 294
Query: 523 SST-----SASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFI 577
S T S+LL L + D+P T NP +
Sbjct: 295 SMTLTPDEVKSLLLKYL----------------DCRPQDLPR----EVLT----TNPRRL 330
Query: 578 EPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV-DPHDQQSVADAL 627
++ + A K+ + ++++ L V +P + + + D L
Sbjct: 331 SIIAESIRDGLAT---WDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRL 378
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 42.9 bits (100), Expect = 6e-04
Identities = 61/403 (15%), Positives = 117/403 (29%), Gaps = 124/403 (30%)
Query: 551 HHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD 610
HH + E VF AF++ F ++ + +K +D
Sbjct: 5 HHMDFETGEHQYQYKDILSVFE-DAFVDNFDCKDVQDM---PKSILSK--------EEID 52
Query: 611 NGLLVDPHDQQSVADALLKLVADKQ--LWARCRQNGL-KNIHLFSWPEHCKTYLSRIAGC 667
+ +++ L + KQ + + + L N + + +S I
Sbjct: 53 H-IIMSKDAVSGT-LRLFWTLLSKQEEMVQKFVEEVLRIN---YKF------LMSPI--- 98
Query: 668 KPRHPQWQRNDDGGETSESDSPGDSL-RDIQDIS----------LNLKFSLDGEKSGASG 716
+ ++ T D L D Q + L L+ +L
Sbjct: 99 -----KTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALL-------- 145
Query: 717 NDDSLDSEGNVADR------KSRLENAVLAWSKGVLKDTRKSGSTDKVDQNTGAAKFPAL 770
L NV K+ +A V KV K
Sbjct: 146 ---ELRPAKNVLIDGVLGSGKT-----WVALD--VCLS-------YKVQC-----KMDF- 182
Query: 771 RRRKHIFVISV-DCDSTTGLLDATKKICEAVEK---ERTEGSIGFILSTSMTISEIHSFL 826
IF +++ +C+S +L+ +K+ ++ R++ S L +E+ L
Sbjct: 183 ----KIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLL 238
Query: 827 VSGHL-----------SPSDFDAFICNSGSDLYYSTLNSEDGPFVVDF-----YYHSHIE 870
S + ++AF N + +T + V DF H ++
Sbjct: 239 KSKPYENCLLVLLNVQNAKAWNAF--NLSCKILLTTRFKQ----VTDFLSAATTTHISLD 292
Query: 871 YRWGGEGLRKT---LVRWASQVTDKKAESGEKVLTPAEQLSTN 910
+ + L+++ L P E L+TN
Sbjct: 293 HHSMTLTPDEVKSLLLKYLDCRPQD--------L-PREVLTTN 326
|
| >1s2o_A SPP, sucrose-phosphatase; phosphohydrolase, HAD superfamily, cyanobacteria; 1.40A {Synechocystis SP} SCOP: c.108.1.10 PDB: 1tj3_A 1tj4_A* 1tj5_A* 1u2s_A* 1u2t_A* 2b1q_A* 2b1r_A* 2d2v_A* Length = 244 | Back alignment and structure |
|---|
Score = 48.0 bits (115), Expect = 6e-06
Identities = 36/232 (15%), Positives = 79/232 (34%), Gaps = 37/232 (15%)
Query: 776 IFVISVDCDSTTGLLDATKKI--CEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP 833
++ D D+T + + + + +R +T + +
Sbjct: 3 QLLLISDLDNT--WVGDQQALEHLQEYLGDRRGN-FYLAYATGRSYHSARELQ--KQVGL 57
Query: 834 SDFDAFICNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKK 893
+ D ++ GS++Y+ + + ++ W + L+
Sbjct: 58 MEPDYWLTAVGSEIYHPEGLDQH--------WADYLSEHWQRDILQAIA----------- 98
Query: 894 AESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPV-KELRKVLRIQALRCHVIYCQNGSRIN 952
G + L P L N P P V +L ++L+ + VI+ ++
Sbjct: 99 --DGFEALKPQSPLEQNPWKISYHLDPQACPTVIDQLTEMLKETGIPVQVIFSSGKD-VD 155
Query: 953 VIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDT--DYEGLLGGVHKTVI 1002
++P +++ A +YL +E S+ +V GD+ D L + VI
Sbjct: 156 LLPQRSNKGNATQYLQQHLAMEPSQTLVC----GDSGNDIG-LFETSARGVI 202
|
| >3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A* Length = 725 | Back alignment and structure |
|---|
Score = 49.4 bits (117), Expect = 6e-06
Identities = 19/119 (15%), Positives = 40/119 (33%), Gaps = 15/119 (12%)
Query: 558 PEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG-------PVDIHRVLD 610
Y + + + P++ EP+G T E G+P + T G ++ ++ D
Sbjct: 509 GLDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGVPSITTNVSGFGSYMEDLIETNQAKD 568
Query: 611 NGLLVDPHDQQSV-------ADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYL 661
G+ + ++ D + + V ++ R L W Y+
Sbjct: 569 YGIYIVDRRFKAPDESVEQLVDYMEEFVKKTRRQRINQRNATEALSDLLDWKRMGLEYV 627
|
| >2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8 Length = 200 | Back alignment and structure |
|---|
Score = 45.6 bits (109), Expect = 2e-05
Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 10/80 (12%)
Query: 578 EPFGLTLIEAAAHG-LPIV-ATKNGGPVDIHRVLD-NGLLVDPHDQQSVADALLK-LVAD 633
EPFGL +EA G +PI A GG DI + + G+LV D +A+A+LK L
Sbjct: 126 EPFGLVALEAMCLGAIPIASAV--GGLRDI--ITNETGILVKAGDPGELANAILKALELS 181
Query: 634 KQLWARCRQNGLKNIHLFSW 653
+ ++ R+N K S+
Sbjct: 182 RSDLSKFRENCKKRA--MSF 199
|
| >3gyg_A NTD biosynthesis operon putative hydrolase NTDB; PF05116, PF08282, MCSG, PSI-2, haloacid dehalogenase-like HY structural genomics; 2.45A {Bacillus subtilis subsp} Length = 289 | Back alignment and structure |
|---|
Score = 44.4 bits (105), Expect = 1e-04
Identities = 29/217 (13%), Positives = 75/217 (34%), Gaps = 24/217 (11%)
Query: 781 VDCDSTTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFI 840
++ + +E++ +G + T +I I + G
Sbjct: 34 FPHTIDEQKQQDIYELEDYLEQKSKDGELIIGWVTGSSIESILDKMGRGKF-RYFPHFIA 92
Query: 841 CNSGSDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKV 900
+ G+++ Y SE D ++S I + E + K + + E+ +
Sbjct: 93 SDLGTEITY---FSEHNFGQQDNKWNSRINEGFSKEKVEK--------LVKQLHENHNIL 141
Query: 901 LTPAEQLSTNYC----YAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSR------ 950
L P QL + Y + + + K+ + ++ C +
Sbjct: 142 LNPQTQLGKSRYKHNFYYQEQDEINDKKNLLAIEKICEEYGVSVNINRCNPLAGDPEDSY 201
Query: 951 -INVIPVLASRSQALRYLYLRWGVELSKMVVFVGESG 986
++ IP+ +++ + ++ ++ + + + F G+SG
Sbjct: 202 DVDFIPIGTGKNEIVTFMLEKYNLNTERAIAF-GDSG 237
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 1057 | ||||
| d1rzua_ | 477 | c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacte | 4e-22 | |
| d2bisa1 | 437 | c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyro | 1e-21 | |
| d1uqta_ | 456 | c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA | 8e-18 | |
| d2iw1a1 | 370 | c.87.1.8 (A:2-371) Lipopolysaccharide core biosynt | 5e-09 | |
| d2bfwa1 | 196 | c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Py | 8e-06 |
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} Length = 477 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Score = 98.6 bits (244), Expect = 4e-22
Identities = 60/376 (15%), Positives = 113/376 (30%), Gaps = 56/376 (14%)
Query: 307 PVAIHGHYADAGDSAALL--SGALNVPMLFTGHS------LGRDKLEQLLKQARLSRDEI 358
P +H H A + + + +P L T H+ G + +L A E
Sbjct: 131 PDMVHAHDWQAAMTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEG 190
Query: 359 NATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCY 418
Y + ++ + A V S +EI L F LE + +R
Sbjct: 191 IEYYNDVSFLKGGLQTATALSTVSPSYAEEI-----LTAEFGMGLEGVIGSRAHV----- 240
Query: 419 GKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVI 478
+ I G++ P + + + + P+
Sbjct: 241 ------LHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRIDDDGSPLF 294
Query: 479 LALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLID 538
++R +K I + +A E L ++ ++ L
Sbjct: 295 CVISRLTWQKGIDLMAEAVDEIV--SLGGRLVVLGAGDVALEGA------------LLAA 340
Query: 539 KYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK 598
+G+V + + + I P+ EP GLT + A +G V +
Sbjct: 341 ASRHHGRVGVAIGYNEPLSHLMQAGCD----AIIIPSRFEPCGLTQLYALRYGCIPVVAR 396
Query: 599 NGGPVDI---------HRVLDNGLLVDPHDQQSVADAL---LKLVADKQLWARCRQNGLK 646
GG D G+ P + A+ ++ D +LW + ++ G+K
Sbjct: 397 TGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMK 456
Query: 647 NIHLFSWPEHCKTYLS 662
SW + Y +
Sbjct: 457 --SDVSWEKSAGLYAA 470
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 437 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 97.2 bits (240), Expect = 1e-21
Identities = 82/474 (17%), Positives = 157/474 (33%), Gaps = 66/474 (13%)
Query: 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMG 249
GG + + ++ AL S+ G + V + T + E ++
Sbjct: 15 VGGLAEALTAISEALASL-G-HEVLVFTPSHGRFQGE----EIGKIRVFGEEVQVKVSYE 68
Query: 250 ESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVA 309
E I RI G D ++++ P + A+ +L + + P
Sbjct: 69 ERGNLRIYRIGGGLLD---SEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREEP--LPDV 123
Query: 310 IHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIE 369
+H H + AL+ +P +FT H L + KL A + + I+
Sbjct: 124 VHFHDWHTVFAGALIKKYFKIPAVFTIHRLNKSKL-----PAFYFHEAGLSELAPYPDID 178
Query: 370 AEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 429
E ++IV T +R + ++W + F+ ++ +
Sbjct: 179 PEHTGGYIADIVTTVSRGYLIDEWGFFRNFEG----------------------KITYVF 216
Query: 430 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKN 489
G++ S D S + +F + + +K
Sbjct: 217 NGIDCSFWN------------ESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKG 264
Query: 490 ITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYP 549
+ L+KA +E + I+ + + + +G V
Sbjct: 265 VDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEG-----------WARSLEEKHGNVKVI 313
Query: 550 KHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVL 609
+ + I P++ EPFGL +EA G +A+ GG DI
Sbjct: 314 TEMLSREFVRELYGSVD---FVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIIT-N 369
Query: 610 DNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLS 662
+ G+LV D +A+A+LK + + ++ R+N K FSW + + Y+
Sbjct: 370 ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSWEKSAERYVK 423
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} Length = 456 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Score = 85.3 bits (210), Expect = 8e-18
Identities = 45/276 (16%), Positives = 90/276 (32%), Gaps = 32/276 (11%)
Query: 406 KLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSE 465
++ R ++ + +GK R + P G+E I Q A P PP ++
Sbjct: 202 RVTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQ--------------AAGPLPPKLAQ 246
Query: 466 IMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIM-----GNRDGID 520
+ N I ++ R D K + A+ + + +R +
Sbjct: 247 LKAELKN--VQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQ 304
Query: 521 EMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPF 580
+ ++ KY G ++ D + ++ + V + +
Sbjct: 305 AYQDIRHQLENEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYS-DVGLVTPLRDGM 363
Query: 581 GLTLIEAAAHGLP-----IVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DK 634
L E A P +V ++ G + L + L+V+P+D+ VA AL + +
Sbjct: 364 NLVAKEYVAAQDPANPGVLVLSQFAGAANE---LTSALIVNPYDRDEVAAALDRALTMSL 420
Query: 635 QLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 670
L I + ++S + PR
Sbjct: 421 AERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 456
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} Length = 370 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Score = 56.8 bits (135), Expect = 5e-09
Identities = 14/78 (17%), Positives = 26/78 (33%), Gaps = 1/78 (1%)
Query: 590 HGLPIVATKNGGPVDIHRVLDNGLLV-DPHDQQSVADALLKLVADKQLWARCRQNGLKNI 648
GLP++ T G + G ++ +P Q+ + + L K + L +N
Sbjct: 292 AGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENARHYA 351
Query: 649 HLFSWPEHCKTYLSRIAG 666
+ I G
Sbjct: 352 DTQDLYSLPEKAADIITG 369
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} Length = 196 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Score = 45.6 bits (106), Expect = 8e-06
Identities = 32/204 (15%), Positives = 60/204 (29%), Gaps = 17/204 (8%)
Query: 451 NEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD-PKKNITTLVKAFGECRPLRELANL 509
NE ++ F + + R D +K + L+KA +E +
Sbjct: 8 NESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM 67
Query: 510 TLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKG 569
I+ + + + + L + + V
Sbjct: 68 RFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLV 127
Query: 570 VFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLK 629
G +A+ GG DI + G+LV D +A+A+LK
Sbjct: 128 ALEAMC--------------LGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILK 172
Query: 630 LVA-DKQLWARCRQNGLKNIHLFS 652
+ + ++ R+N K FS
Sbjct: 173 ALELSRSDLSKFRENCKKRAMSFS 196
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 1057 | |||
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 100.0 | |
| d1rzua_ | 477 | Glycogen synthase 1, GlgA {Agrobacterium tumefacie | 100.0 | |
| d2iw1a1 | 370 | Lipopolysaccharide core biosynthesis protein RfaG | 100.0 | |
| d1uqta_ | 456 | Trehalose-6-phosphate synthase, OtsA {Escherichia | 100.0 | |
| d1s2oa1 | 244 | Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc | 100.0 | |
| d1nrwa_ | 285 | Hypothetical protein YwpJ {Bacillus subtilis [TaxI | 100.0 | |
| d2rbka1 | 260 | Sugar-phosphate phosphatase BT4131 {Bacteroides th | 100.0 | |
| d1rkqa_ | 271 | Hypothetical protein YidA {Escherichia coli [TaxId | 100.0 | |
| d1rlma_ | 269 | Sugar phosphatase SupH (YbiV) {Escherichia coli [T | 99.98 | |
| d1nf2a_ | 267 | Hypothetical protein TM0651 {Thermotoga maritima [ | 99.97 | |
| d1l6ra_ | 225 | Phosphoglycolate phosphatase, PGPase {Archaeon The | 99.96 | |
| d1wr8a_ | 230 | Phosphoglycolate phosphatase, PGPase {Pyrococcus h | 99.95 | |
| d2b30a1 | 283 | PFL1270w orthologue {Plasmodium vivax [TaxId: 5855 | 99.95 | |
| d2bfwa1 | 196 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 99.94 | |
| d1wzca1 | 243 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.93 | |
| d1xvia_ | 232 | Putative mannosyl-3-phosphoglycerate phosphatase M | 99.91 | |
| d1u02a_ | 229 | Trehalose-6-phosphate phosphatase related protein | 99.9 | |
| d2f9fa1 | 166 | First mannosyl transferase WbaZ {Archaeoglobus ful | 99.88 | |
| d2fuea1 | 244 | Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: | 99.87 | |
| d2amya1 | 243 | Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: | 99.84 | |
| d1pn3a_ | 391 | TDP-epi-vancosaminyltransferase GtfA {Amycolatopsi | 99.57 | |
| d1rrva_ | 401 | TDP-vancosaminyltransferase GftD {Amycolatopsis or | 99.53 | |
| d1f0ka_ | 351 | Peptidoglycan biosynthesis glycosyltransferase Mur | 99.48 | |
| d1rkua_ | 206 | Homoserine kinase ThrH {Pseudomonas aeruginosa [Ta | 99.45 | |
| d1iira_ | 401 | UDP-glucosyltransferase GtfB {Amycolatopsis orient | 99.42 | |
| d1l5wa_ | 796 | Maltodextrin phosphorylase (MALP) {Escherichia col | 99.11 | |
| d2acva1 | 461 | Triterpene UDP-glucosyl transferase UGT71G1 {Medic | 99.08 | |
| d1o6ca_ | 377 | UDP-N-acetylglucosamine 2-epimerase {Bacillus subt | 99.02 | |
| d2pq6a1 | 473 | (Iso)flavonoid glycosyltransferase {Medicago trunc | 99.02 | |
| d1v4va_ | 373 | UDP-N-acetylglucosamine 2-epimerase {Thermus therm | 98.98 | |
| d2c4na1 | 250 | NagD {Escherichia coli [TaxId: 562]} | 98.91 | |
| d2gj4a1 | 824 | Glycogen phosphorylase {Rabbit (Oryctolagus cunicu | 98.89 | |
| d1yv9a1 | 253 | Putative hydrolase EF1188 {Enterococcus faecalis [ | 98.82 | |
| d1vjra_ | 261 | Hypothetical protein TM1742 {Thermotoga maritima [ | 98.77 | |
| d2c1xa1 | 450 | UDP glucose:flavonoid 3-o-glucosyltransferase {Gra | 98.76 | |
| d2vcha1 | 471 | Hydroquinone glucosyltransferase {Thale cress (Ara | 98.69 | |
| d2feaa1 | 226 | 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate | 98.57 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 98.55 | |
| d1wvia_ | 253 | Putative phosphatase SMU.1415c {Streptococcus muta | 98.54 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 98.47 | |
| d1nnla_ | 217 | Phosphoserine phosphatase {Human (Homo sapiens) [T | 98.17 | |
| d1f6da_ | 376 | UDP-N-acetylglucosamine 2-epimerase {Escherichia c | 98.04 | |
| d1ygpa_ | 876 | Glycogen phosphorylase {Baker's yeast (Saccharomyc | 97.98 | |
| d1xpja_ | 124 | Hypothetical protein VC0232 {Vibrio cholerae [TaxI | 97.5 | |
| d2b8ea1 | 135 | Cation-transporting ATPase {Archaeon Archaeoglobus | 97.23 | |
| d1ltqa1 | 149 | Polynucleotide kinase, phosphatase domain {Bacteri | 97.07 | |
| d2obba1 | 122 | Hypothetical protein BT0820 {Bacteroides thetaiota | 97.05 | |
| d1wpga2 | 168 | Calcium ATPase, catalytic domain P {Rabbit (Orycto | 96.99 | |
| d2fpwa1 | 161 | Histidine biosynthesis bifunctional protein HisB, | 96.43 | |
| d2hcfa1 | 228 | Hypothetical protein CT1708 {Chlorobium tepidum [T | 96.42 | |
| d1pswa_ | 348 | ADP-heptose LPS heptosyltransferase II {Escherichi | 95.96 | |
| d2hsza1 | 224 | Phosphoglycolate phosphatase Gph {Haemophilus somn | 95.82 | |
| d1te2a_ | 218 | Phosphatase YniC {Escherichia coli [TaxId: 562]} | 95.81 | |
| d1u7pa_ | 164 | Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mu | 95.57 | |
| d1qyia_ | 380 | Hypothetical protein MW1667 (SA1546) {Staphylococc | 95.47 | |
| d2o2xa1 | 209 | Hypothetical protein Mll2559 {Mesorhizobium loti [ | 95.26 | |
| d2gmwa1 | 182 | D,D-heptose 1,7-bisphosphate phosphatase GmhB {Esc | 94.98 | |
| d1cr6a1 | 222 | Epoxide hydrolase, N-terminal domain {Mouse (Mus m | 94.68 | |
| d1k1ea_ | 177 | Probable phosphatase YrbI {Haemophilus influenzae, | 94.39 | |
| d2go7a1 | 204 | Hypothetical protein SP2064 {Streptococcus pneumon | 93.98 | |
| d2bdua1 | 291 | Cytosolic 5'-nucleotidase III {Mouse (Mus musculus | 93.97 | |
| d1yj5a1 | 195 | 5' polynucleotide kinase-3' phosphatase, middle do | 93.54 | |
| d2fi1a1 | 187 | Putative hydrolase SP0805 {Streptococcus pneumonia | 93.21 | |
| d2ah5a1 | 210 | predicted phosphatase SP0104 {Streptococcus pneumo | 93.1 | |
| d1j97a_ | 210 | Phosphoserine phosphatase {Archaeon Methanococcus | 93.0 | |
| d2hdoa1 | 207 | Phosphoglycolate phosphatase {Lactobacillus planta | 91.72 | |
| d1zrna_ | 220 | L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., s | 83.5 |
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=100.00 E-value=0 Score=344.71 Aligned_cols=426 Identities=21% Similarity=0.270 Sum_probs=294.8
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCC-CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 199998213444457868899998-8827799999999982399903699983387899889756986322589999863
Q 001541 166 LYIVLISIHGLIRGENMELGRDSD-TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDF 244 (1057)
Q Consensus 166 l~Illis~~~~~~~~~~~~g~~~d-~GG~~~yv~~LA~aLa~~G~v~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~ 244 (1057)
|||++++..+. |. +||+++|+..|+++|+++| |+|+|+|+...... ............ .-..
T Consensus 1 MkIl~~~~~~p-----------P~~~GG~~~~~~~La~~L~~~G--h~V~Vvtp~~~~~~--~~~~~~~~~~~~--~~~~ 63 (437)
T d2bisa1 1 MKVLLLGFEFL-----------PVKVGGLAEALTAISEALASLG--HEVLVFTPSHGRFQ--GEEIGKIRVFGE--EVQV 63 (437)
T ss_dssp CEEEEECSCCT-----------TCCSSSHHHHHHHHHHHHHHTT--CEEEEEEECTTSSC--CEEEEEEECSSS--EEEE
T ss_pred CEEEEECCCCC-----------CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCC--HHHCCCEEECCC--CCCE
T ss_conf 98799877458-----------8455879999999999999769--98999905898655--444154022154--4201
Q ss_pred CCCCCCCCCEEEEECCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHH
Q ss_conf 444688899299982699965453323-5798736789889999999878988663599999650999859981489999
Q 001541 245 MDDMGESSGAYIIRIPFGPKDKYIAKE-LLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAAL 323 (1057)
Q Consensus 245 ~~~~~~~~gv~iirip~~~~~~~l~k~-~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDIIh~h~~~~~~~a~~ 323 (1057)
........++.++++..+. +... ...+.........+.+.......+...+... ..|||||+|++..+.++.+
T Consensus 64 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pDiIh~~~~~~~~~~~~ 137 (437)
T d2bisa1 64 KVSYEERGNLRIYRIGGGL----LDSEDVYGPGWDGLIRKAVTFGRASVLLLNDLLREE--PLPDVVHFHDWHTVFAGAL 137 (437)
T ss_dssp EEEEEEETTEEEEEEESSG----GGCSCTTCSHHHHHHHHHHHHHHHHHHHHHHHTTSS--CCCSEEEEETGGGHHHHHH
T ss_pred EEEEECCCCEEEEECCCCC----CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC--CCCCEEEECCHHHHHHHHH
T ss_conf 1233225881799617543----454112553114689999998999999899998408--9997899897046667654
Q ss_pred HHHCCCCCEEEEECCCCHHHHHHHH-HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCHH
Q ss_conf 9803999799992588320479999-951102677877878989899999875037999946978999999540799847
Q 001541 324 LSGALNVPMLFTGHSLGRDKLEQLL-KQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPV 402 (1057)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~~~~l~-~~g~~~~~~i~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~ 402 (1057)
+++..++|+|++.|+.......... ........ ....++..+......+|.+++.+.....+.+..+.....
T Consensus 138 ~~~~~~~~~v~~~h~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~~~~- 210 (437)
T d2bisa1 138 IKKYFKIPAVFTIHRLNKSKLPAFYFHEAGLSEL------APYPDIDPEHTGGYIADIVTTVSRGYLIDEWGFFRNFEG- 210 (437)
T ss_dssp HHHHHCCCEEEEESSCCCCCEEHHHHHHTTCGGG------CCSSEECHHHHHHHHSSEEEESCHHHHHHTHHHHGGGTT-
T ss_pred HHCCCCCCEEEEEEECCCCCCCHHHHHHCCCHHH------HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCC-
T ss_conf 3013467625899621445551233210120134------567788999888876522111102456666665134567-
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEE
Q ss_conf 89999996820334458899969994999878986789999999778899999999982279987641799985999984
Q 001541 403 LERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALA 482 (1057)
Q Consensus 403 ~~~~l~~~~~~gv~~~g~~~~kv~VIpnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vG 482 (1057)
++.+||||+|.+.|.+..... ........+...+...+++.|+++|
T Consensus 211 ---------------------ki~vi~~g~d~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~i~~~G 256 (437)
T d2bisa1 211 ---------------------KITYVFNGIDCSFWNESYLTG-------------SRDERKKSLLSKFGMDEGVTFMFIG 256 (437)
T ss_dssp ---------------------TEEECCCCCCTTTSCGGGCCS-------------CHHHHHHHHHHHTTCCSCEEEEEES
T ss_pred ---------------------CEEEEECCCCCCCCCCCCCCH-------------HHHHHHHHHHHHHHCCCCCEEEEEE
T ss_conf ---------------------518970465443433222201-------------0588887654554026786698730
Q ss_pred CCC-CCCCHHHHHHHHHHCCCCCCCCCEEE-EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHH
Q ss_conf 899-97899999999976401359984999-9950899751001018999999999987199997783999997829999
Q 001541 483 RPD-PKKNITTLVKAFGECRPLRELANLTL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEI 560 (1057)
Q Consensus 483 Rl~-~~Kgi~~Ll~A~~~l~~~~~~~~l~L-IvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~f~g~v~~~ei~~l 560 (1057)
|+. +.||+..+++|+..+......+++.| ++|.++. .....+..+... ....+.+.+.++.+++..+
T Consensus 257 ~~~~~~Kg~~~ll~a~~~~~~~~~~~~~~lvi~G~~~~---------~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 325 (437)
T d2bisa1 257 RFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDP---------ELEGWARSLEEK--HGNVKVITEMLSREFVREL 325 (437)
T ss_dssp CBCSSSSCHHHHHHHHHHHTTSGGGGGEEEEEECCBCH---------HHHHHHHHHHHT--CTTEEEECSCCCHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC---------CCCCCHHHHCCC--CCCCEECCCCCCHHHHHHH
T ss_conf 35665125899986410233233333211453102233---------332100221023--2100002345768889998
Q ss_pred HHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHH-CHHHHHH
Q ss_conf 997014993999729989987899999983996998388881013303984699199999999999999971-9999999
Q 001541 561 YRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWAR 639 (1057)
Q Consensus 561 y~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~e~la~aI~~ll~-d~~~~~~ 639 (1057)
|+.| |++++||..|+||++++||||||+|||+++.||..|++.+ .+|+++++.|+++++++|.++++ +++.+++
T Consensus 326 ~~~a----di~v~~s~~e~~~~~~~Eama~G~Pvi~~~~g~~~e~i~~-~~G~~~~~~d~~~la~~i~~ll~~~~~~~~~ 400 (437)
T d2bisa1 326 YGSV----DFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSK 400 (437)
T ss_dssp HTTC----SEEEECCSCCSSCHHHHHHHTTTCEEEEESCTTHHHHCCT-TTCEEECTTCHHHHHHHHHHHHTTTTSCTHH
T ss_pred HHHH----CCCCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCHHHEEC-CCEEEECCCCHHHHHHHHHHHHHCCHHHHHH
T ss_conf 7642----2354446555642689999987998999389980773778-9589977999999999999998379999999
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC
Q ss_conf 99999899440998999999999998033999
Q 001541 640 CRQNGLKNIHLFSWPEHCKTYLSRIAGCKPRH 671 (1057)
Q Consensus 640 ~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~~~ 671 (1057)
+++++++.+++|||+.++++|+++|+++.++.
T Consensus 401 ~~~~~~~~~~~~s~~~~a~~~~~iY~~~i~r~ 432 (437)
T d2bisa1 401 FRENCKKRAMSFSWEKSAERYVKAYTGSIDRA 432 (437)
T ss_dssp HHHHHHHHHHHSCHHHHHHHHHHHHHTCSCCB
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 99999999996999999999999999999867
|
| >d1rzua_ c.87.1.8 (A:) Glycogen synthase 1, GlgA {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Agrobacterium tumefaciens [TaxId: 358]
Probab=100.00 E-value=0 Score=351.68 Aligned_cols=451 Identities=15% Similarity=0.123 Sum_probs=270.6
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCC--CCCCC
Q ss_conf 1999982134444578688999988827799999999982399903699983387899889756986322589--99986
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTP--RNSDD 243 (1057)
Q Consensus 166 l~Illis~~~~~~~~~~~~g~~~d~GG~~~yv~~LA~aLa~~G~v~~V~vit~~~~~~~~~~~y~~~~e~l~~--~~~~~ 243 (1057)
|||++|+...+ | ...+||...+|.+|+++|+++| |+|+|+|+.+. .+...+..+.+.+.. .....
T Consensus 1 M~i~~v~~e~~----P-----~~~~GGl~~vv~~La~~L~~~G--h~V~Vi~P~y~--~~~~~~~~~~~~~~~~~~~~~~ 67 (477)
T d1rzua_ 1 MNVLSVSSEIY----P-----LIKTGGLADVVGALPIALEAHG--VRTRTLIPGYP--AVKAAVTDPVKCFEFTDLLGEK 67 (477)
T ss_dssp CEEEEECSCBT----T-----TBCSSHHHHHHHHHHHHHHTTT--CEEEEEEECCH--HHHHHCCSCEEEEEESCSSSCC
T ss_pred CEEEEEEEEEE----C-----CCCCCCHHHHHHHHHHHHHHCC--CEEEEEECCCC--CHHHHCCCCEEEEEEECCCCCE
T ss_conf 98999977220----6-----3326768999999999999769--96999966985--3446525665899971467854
Q ss_pred CCCCCCCCCCEEEEECCCCC-----CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCH
Q ss_conf 34446888992999826999-----6545332357987367898899999998789886635999996509998599814
Q 001541 244 FMDDMGESSGAYIIRIPFGP-----KDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAG 318 (1057)
Q Consensus 244 ~~~~~~~~~gv~iirip~~~-----~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDIIh~h~~~~~ 318 (1057)
.........++.++.+.... ...+.. ...-.|...+.. ...+.....+.+... ....+|||||+|+|.++
T Consensus 68 ~~~~~~~~~~v~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~pDIvH~h~~~~~ 142 (477)
T d1rzua_ 68 ADLLEVQHERLDLLILDAPAYYERSGGPYLG-QTGKDYPDNWKR-FAALSLAAARIGAGV---LPGWRPDMVHAHDWQAA 142 (477)
T ss_dssp EEEEEEEETTEEEEEEECHHHHCSSSCSSBC-TTSSBCTTHHHH-HHHHHHHHHHHHTTC---SSSCCCSEEEEEHHHHT
T ss_pred EEEEEEEECCEEEEEECCHHHCCCCCCCCCC-CCCCCCCCCHHH-HHHHHHHHHHHHHHC---CCCCCCCEEEECCHHHH
T ss_conf 7899999899159995582430467873557-666566521889-999998877665302---56888887993360677
Q ss_pred HHHHHH--HHCCCCCEEEEECCCCHHHHH--HHHHHHHCCHHHHH-HHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH
Q ss_conf 899999--803999799992588320479--99995110267787-7878989899999875037999946978999999
Q 001541 319 DSAALL--SGALNVPMLFTGHSLGRDKLE--QLLKQARLSRDEIN-ATYKIMRRIEAEELSLDASEIVITSTRQEIEEQW 393 (1057)
Q Consensus 319 ~~a~~l--~~~~~iP~V~t~H~l~~~~~~--~l~~~g~~~~~~i~-~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~ 393 (1057)
..+..+ ++..++|+|+|.|++...... ..+..-........ ........+..++.....+|.++++|....++..
T Consensus 143 l~~~~~~~~~~~~ip~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~~~~vs~~~~~~~~ 222 (477)
T d1rzua_ 143 MTPVYMRYAETPEIPSLLTIHNIAFQGQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEIL 222 (477)
T ss_dssp THHHHHHHSSSCCCCEEEEESCTTCCCEECGGGGGGSCCCGGGSSTTTTEETTEEEHHHHHHHHCSEEEESCHHHHHHTT
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 88999998547898889998324423467888998862114440654434320568999887764442131199999999
Q ss_pred HHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHC-
Q ss_conf 54079984789999996820334458899969994999878986789999999778899999999982-2799876417-
Q 001541 394 RLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPP-IWSEIMRFFT- 471 (1057)
Q Consensus 394 ~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~kv~VIpnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~- 471 (1057)
..+.+.... ...+ ....++.+||||+|.+.|.|.....-..-.. ......... ......+...
T Consensus 223 ~~~~~~~~~--~~~~-----------~~~~~~~vi~ngv~~~~~~p~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~~ 287 (477)
T d1rzua_ 223 TAEFGMGLE--GVIG-----------SRAHVLHGIVNGIDADVWNPATDHLIHDNYS--AANLKNRALNKKAVAEHFRID 287 (477)
T ss_dssp SHHHHTTCH--HHHH-----------TTGGGEEECCCCBCTTTSCTTTCTTSSSCCB--TTBCTTHHHHHHHHHHHHTCC
T ss_pred HHHCCCCHH--HHHH-----------HCCCCEEEEECCCCHHHCCCCCCCCCCCCCH--HHHHHHHHHHHHHHHHHCCCC
T ss_conf 875475366--5666-----------5156479997893401205664533333310--456777666389988741446
Q ss_pred CCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
Q ss_conf 99985999984899978999999999764013599849999950899751001018999999999987199997783999
Q 001541 472 NPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 472 ~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~f~g~ 551 (1057)
.++.++|+++||+.+.||++.|++|+.++.+ ..+.+ +++|.++. .....+..+...+ .++|.+.+.
T Consensus 288 ~~~~~~i~~vgrl~~~KG~~~Ll~a~~~~~~--~~~~l-~~~G~G~~---------~~~~~~~~~~~~~--~~~v~~~~~ 353 (477)
T d1rzua_ 288 DDGSPLFCVISRLTWQKGIDLMAEAVDEIVS--LGGRL-VVLGAGDV---------ALEGALLAAASRH--HGRVGVAIG 353 (477)
T ss_dssp CSSSCEEEEESCBSTTTTHHHHHTTHHHHHH--TTCEE-EEEECBCH---------HHHHHHHHHHHHT--TTTEEEEES
T ss_pred CCCCCEEEEEEEEEECCCCHHHHHHHHHHHH--HCCEE-EEEECCCC---------HHHHHHHHHHHHC--CCEEEEECC
T ss_conf 6786389998500215883799999998786--59839-99936774---------5778999987635--872789715
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHCCC---------CEEEECCCCHHH
Q ss_conf 99782999999701499399972998998789999998399699838888101330398---------469919999999
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLD---------NGLLVDPHDQQS 622 (1057)
Q Consensus 552 v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~---------~Gllv~p~d~e~ 622 (1057)
.+.+++..+|+.| |+||+||.+|+||++++||||||+|||+|+.||++|+|.++. +|++|+|.|+++
T Consensus 354 ~~~~~~~~~~~~a----D~~v~PS~~E~fglv~lEAma~G~PvVas~~GG~~E~v~d~~~~~~~~~~~~G~l~~~~d~~~ 429 (477)
T d1rzua_ 354 YNEPLSHLMQAGC----DAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDG 429 (477)
T ss_dssp CCHHHHHHHHHHC----SEEEECCSCCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCHHHHHTTCCCBEEESSCSHHH
T ss_pred CCHHHHHHHHHHC----CCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCCCEEEECCCCHHH
T ss_conf 4705799999838----513488653578889999998399899907999740552487553346787448969999999
Q ss_pred HHHHHHHHHH---CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCC
Q ss_conf 9999999971---9999999999998994409989999999999980339
Q 001541 623 VADALLKLVA---DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKP 669 (1057)
Q Consensus 623 la~aI~~ll~---d~~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~ 669 (1057)
++++|.++++ ++++|++++++++ .++|||+.++++|+++|++++.
T Consensus 430 la~ai~~~l~~~~~~~~~~~~~~~a~--~~~fsw~~~a~~~~~lY~~ll~ 477 (477)
T d1rzua_ 430 LKQAIRRTVRYYHDPKLWTQMQKLGM--KSDVSWEKSAGLYAALYSQLIS 477 (477)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHH--TCCCBHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHH--HHHCCHHHHHHHHHHHHHHHHC
T ss_conf 99999999860079999999999999--8518999999999999999849
|
| >d2iw1a1 c.87.1.8 (A:2-371) Lipopolysaccharide core biosynthesis protein RfaG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Lipopolysaccharide core biosynthesis protein RfaG species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=5e-42 Score=291.17 Aligned_cols=366 Identities=17% Similarity=0.208 Sum_probs=253.3
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99982134444578688999988827799999999982399903699983387899889756986322589999863444
Q 001541 168 IVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDD 247 (1057)
Q Consensus 168 Illis~~~~~~~~~~~~g~~~d~GG~~~yv~~LA~aLa~~G~v~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~ 247 (1057)
|+|+..+++ | .||+++++.+||++|+++| |+|+|+|+......
T Consensus 2 i~f~~~~y~-----------p-~GG~e~~~~~la~~L~~~G--~~V~v~~~~~~~~~----------------------- 44 (370)
T d2iw1a1 2 VAFCLYKYF-----------P-FGGLQRDFMRIASTVAARG--HHVRVYTQSWEGDC----------------------- 44 (370)
T ss_dssp EEEECSEEC-----------T-TCHHHHHHHHHHHHHHHTT--CCEEEEESEECSCC-----------------------
T ss_pred EEEEECCCC-----------C-CCCHHHHHHHHHHHHHHCC--CEEEEEECCCCCCC-----------------------
T ss_conf 899914889-----------9-9989999999999999779--97999956787788-----------------------
Q ss_pred CCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHC
Q ss_conf 68889929998269996545332357987367898899999998789886635999996509998599814899999803
Q 001541 248 MGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGA 327 (1057)
Q Consensus 248 ~~~~~gv~iirip~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDIIh~h~~~~~~~a~~l~~~ 327 (1057)
..++.+++++......+. ....|... +.+.+.. ..+|+||.+...++.
T Consensus 45 ---~~~~~~~~~~~~~~~~~~-------~~~~~~~~-------~~~~~~~-------~~~d~v~~~~~~~~~-------- 92 (370)
T d2iw1a1 45 ---PKAFELIQVPVKSHTNHG-------RNAEYYAW-------VQNHLKE-------HPADRVVGFNKMPGL-------- 92 (370)
T ss_dssp ---CTTCEEEECCCCCSSHHH-------HHHHHHHH-------HHHHHHH-------SCCSEEEESSCCTTC--------
T ss_pred ---CCCEEEEECCCCCCCCCH-------HHHHHHHH-------HHHHHHH-------CCCCEEEECCCCCHH--------
T ss_conf ---886389986765544301-------15889999-------9999986-------165525310367237--------
Q ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCHHHHHHH
Q ss_conf 99979999258832047999995110267787787898989999987503799994697899999954079984789999
Q 001541 328 LNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKL 407 (1057)
Q Consensus 328 ~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l 407 (1057)
.+. ..++....... ....+.. ......+.....+.........++.+++.+......+...+... +
T Consensus 93 ---~~~-~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------ 158 (370)
T d2iw1a1 93 ---DVY-FAADVCYAEKV-AQEKGFL--YRLTSRYRHYAAFERATFEQGKSTKLMMLTDKQIADFQKHYQTE-P------ 158 (370)
T ss_dssp ---SEE-ECCSCCHHHHH-HHHCCHH--HHTSHHHHHHHHHHHHHHSTTCCCEEEESCHHHHHHHHHHHCCC-G------
T ss_pred ---HHH-HHHHCCCCEEE-EEECCCC--CCCCCHHCHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHCCCC-C------
T ss_conf ---899-87622441046-6304742--00040000067889999742157469982479999999860999-6------
Q ss_pred HHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH-HHHHHCCCCCCEEEEEECCCC
Q ss_conf 9968203344588999699949998789867899999997788999999999822799-876417999859999848999
Q 001541 408 RARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSE-IMRFFTNPRKPVILALARPDP 486 (1057)
Q Consensus 408 ~~~~~~gv~~~g~~~~kv~VIpnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Il~vGRl~~ 486 (1057)
.++.+||||+|.+.+.+.. .+..... +..+...+++++|+++||+.+
T Consensus 159 ---------------~~i~vi~~gv~~~~~~~~~-----------------~~~~~~~~r~~~~~~~~~~~i~~~gr~~~ 206 (370)
T d2iw1a1 159 ---------------ERFQILPPGIYPDRKYSEQ-----------------IPNSREIYRQKNGIKEQQNLLLQVGSDFG 206 (370)
T ss_dssp ---------------GGEEECCCCCCGGGSGGGS-----------------CTTHHHHHHHHTTCCTTCEEEEEECSCTT
T ss_pred ---------------CEEEEEEEECCCCCCCCCC-----------------CHHHHHHHHHCCCCCCCCEEEEEEECCCC
T ss_conf ---------------4289997402222112467-----------------65666665430488866369999851455
Q ss_pred CCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHC
Q ss_conf 78999999999764013599849999950899751001018999999999987199997783999997829999997014
Q 001541 487 KKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAK 566 (1057)
Q Consensus 487 ~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~f~g~v~~~ei~~ly~~Aa~ 566 (1057)
.||++.+++|+..+.+..+...+ +++|+++.. ..+.+++.+++...++.|.|+ .+++..+|+.|
T Consensus 207 ~Kg~~~li~a~~~l~~~~~~~~~-~ii~g~~~~-----------~~~~~~~~~~~~~~~v~~~g~--~~~~~~~~~~a-- 270 (370)
T d2iw1a1 207 RKGVDRSIEALASLPESLRHNTL-LFVVGQDKP-----------RKFEALAEKLGVRSNVHFFSG--RNDVSELMAAA-- 270 (370)
T ss_dssp TTTHHHHHHHHHTSCHHHHHTEE-EEEESSSCC-----------HHHHHHHHHHTCGGGEEEESC--CSCHHHHHHHC--
T ss_pred CCCHHHHCCCCCCCCCCCCCCEE-EECCCCCCC-----------CCCCCCCCCCCCCCCCCCCCC--CCCCCCCCCCC--
T ss_conf 42033320111233233221000-001122222-----------232222222222222222332--33444222333--
Q ss_pred CCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHCCCCEEEE-CCCCHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 9939997299899878999999839969983888810133039846991-999999999999999719999999999998
Q 001541 567 TKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLV-DPHDQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 567 ~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv-~p~d~e~la~aI~~ll~d~~~~~~~~~~a~ 645 (1057)
|++|+||..|+||++++||||||+|||+++.||..|++.++.+|+++ +|.|+++++++|.++++|++++++++++|+
T Consensus 271 --dv~v~ps~~E~~~~~~~EAma~G~PvI~s~~~g~~e~i~~~~~G~l~~~~~d~~~la~~i~~ll~d~~~~~~~~~~ar 348 (370)
T d2iw1a1 271 --DLLLHPAYQEAAGIVLLEAITAGLPVLTTAVCGYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQSPLRMAWAENAR 348 (370)
T ss_dssp --SEEEECCSCCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred --CCCCCCCCCCCCCCEEEECCCCCEEEEEECCCCHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf --344432222343311332145770399938997188852798369986999999999999999769999999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHC
Q ss_conf 994409989999999999980
Q 001541 646 KNIHLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 646 ~~v~~fsw~~~a~~~l~~l~~ 666 (1057)
++++.|+|..|.+++.++|+.
T Consensus 349 ~~~~~~~~~~~~~~~~~ii~g 369 (370)
T d2iw1a1 349 HYADTQDLYSLPEKAADIITG 369 (370)
T ss_dssp HHHHHSCCSCHHHHHHHHHHC
T ss_pred HHHHHHCHHHHHHHHHHHHHC
T ss_conf 999982854799999999848
|
| >d1uqta_ c.87.1.6 (A:) Trehalose-6-phosphate synthase, OtsA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Trehalose-6-phosphate synthase, OtsA domain: Trehalose-6-phosphate synthase, OtsA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=1.8e-37 Score=261.11 Aligned_cols=427 Identities=16% Similarity=0.143 Sum_probs=279.1
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99998213444457868899998882779999999998239990369998338789988975698632258999986344
Q 001541 167 YIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMD 246 (1057)
Q Consensus 167 ~Illis~~~~~~~~~~~~g~~~d~GG~~~yv~~LA~aLa~~G~v~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~ 246 (1057)
|+++||....+. ..+.+.+||..+-+.. .+.+.+|++ +-......++. .+..
T Consensus 2 rlivvsnr~~~~-----~~~~~~~gGl~~al~~---~~~~~~g~W---vgw~g~~~~~~-----~~~~------------ 53 (456)
T d1uqta_ 2 RLVVVSNRIAPP-----DEHAASAGGLAVGILG---ALKAAGGLW---FGWSGETGNED-----QPLK------------ 53 (456)
T ss_dssp CEEEEEEECCCC-----C----CCCHHHHHHHH---HHHHHCEEE---EEEEEEESCCS-----SCCE------------
T ss_pred CEEEEECCCCCC-----CCCCCCCCCHHHHHHH---HHHHCCCEE---EECCCCCCCCC-----CHHH------------
T ss_conf 789997999978-----8877899618997299---995179789---96699887664-----2345------------
Q ss_pred CCCCCCCEEEEECCCCCCC-----CCCCCCCCCCCHH------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 4688899299982699965-----4533235798736------7898899999998789886635999996509998599
Q 001541 247 DMGESSGAYIIRIPFGPKD-----KYIAKELLWPHIP------EFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA 315 (1057)
Q Consensus 247 ~~~~~~gv~iirip~~~~~-----~~l~k~~l~~~l~------~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDIIh~h~~ 315 (1057)
.....++....++..+.+ ....+..+||.+. .|.+..+....+..+...+.+...- ..-|+|+.|.+
T Consensus 54 -~~~~~~~~~~~v~l~~~~~~~~Y~gf~n~~LWpl~H~~~~~~~~~~~~~~~Y~~vN~~fA~~l~~~~-~~~d~iwvhDy 131 (456)
T d1uqta_ 54 -KVKKGNITWASFNLSEQDLDEYYNQFSNAVLWPAFHYRLDLVQFQRPAWDGYLRVNALLADKLLPLL-QDDDIIWIHDY 131 (456)
T ss_dssp -EEEETTEEEEEEEECHHHHHHHTTTHHHHTHHHHHTTCGGGCCCCHHHHHHHHHHHHHHHHHHGGGC-CTTCEEEEESG
T ss_pred -HHHCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCEEEEECC
T ss_conf -5540585169956999999999987154426210157666544037888889999999999998725-68986999545
Q ss_pred CCHHHHHHHHH-CCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHH
Q ss_conf 81489999980-39997999925883204799999511026778778789898999998750379999469789999995
Q 001541 316 DAGDSAALLSG-ALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWR 394 (1057)
Q Consensus 316 ~~~~~a~~l~~-~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~ 394 (1057)
....++..+.+ ..+.+++++.|..++.... +. .++ ..+. ....+-.+|.|...+......+..
T Consensus 132 hl~llp~~lR~~~~~~~i~~flH~pfP~~~~--fr--~lp---------~~~~---il~~ll~~d~igf~~~~~~~~fl~ 195 (456)
T d1uqta_ 132 HLLPFAHELRKRGVNNRIGFFLHIPFPTPEI--FN--ALP---------TYDT---LLEQLCDYDLLGFQTENDRLAFLD 195 (456)
T ss_dssp GGTTHHHHHHHTTCCSCEEEECCSCCCCHHH--HT--TST---------THHH---HHHHHTTSSEEEESSHHHHHHHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEEECCCCCCHHH--HC--CCC---------CHHH---HHHHHHCCCCCCCCCHHHHHHHHH
T ss_conf 2555699999858998589996899998577--55--485---------0699---997763226200358999999999
Q ss_pred HHCCCCHHHHHHHHH--HHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 407998478999999--682033445889996999499987898678999999977889999999998227998764179
Q 001541 395 LYDGFDPVLERKLRA--RIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTN 472 (1057)
Q Consensus 395 ~y~~~~~~~~~~l~~--~~~~gv~~~g~~~~kv~VIpnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (1057)
.. .+.++. +...++...|+.. ++.++|+|||...|.+.... .......++...+
T Consensus 196 ~~-------~~ll~~~~~~~~~i~~~gr~v-~v~~~p~GID~~~~~~~~~~--------------~~~~~~~~l~~~~-- 251 (456)
T d1uqta_ 196 CL-------SNLTRVTTRSAKSHTAWGKAF-RTEVYPIGIEPKEIAKQAAG--------------PLPPKLAQLKAEL-- 251 (456)
T ss_dssp HH-------HHHSCEEEETTTEEEETTEEE-EEEECCCCCCHHHHHHHHHS--------------CCCHHHHHHHHHT--
T ss_pred HH-------HHHHCCCCCCCCEEEECCCEE-EEEEECCCCCCHHHHHHCCC--------------HHHHHHHHHHHHC--
T ss_conf 99-------997386112687299568155-30120676562665431140--------------7799999977752--
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCC--CEEEE-EECCC--C---CCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 99859999848999789999999997640135998--49999-95089--9---75100101899999999998719999
Q 001541 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELA--NLTLI-MGNRD--G---IDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~--~l~LI-vG~~~--~---~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1057)
.++++|+++||+++.||+..+++||+++++..+.. ++.++ ++.+. + +.++..+......+++..+...++.+
T Consensus 252 ~~~~~il~V~Rld~~KGi~~~l~A~~~~l~~~p~~~~~v~lv~~~~~~~~~~~~~~~~~~ev~~lv~~in~~~~~~~~~~ 331 (456)
T d1uqta_ 252 KNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKYGQLGWTP 331 (456)
T ss_dssp TTCEEEEEECCBCGGGCHHHHHHHHHHHHHHCGGGTTTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHHCBTTBCS
T ss_pred CCCEEEEEECCCCHHHCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 89859999378743206589999999998758431461899997487534568899999999999999876521279875
Q ss_pred CEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCC-----EEECCCCCCHHHHHCCCCEEEECCCC
Q ss_conf 7783999997829999997014993999729989987899999983996-----99838888101330398469919999
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLP-----IVATKNGGPVDIHRVLDNGLLVDPHD 619 (1057)
Q Consensus 545 ~V~f~g~v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~P-----VIat~~Gg~~eii~~~~~Gllv~p~d 619 (1057)
.+.+.+.++++++..+|+.| |++++||+.||||++++||||||+| +|+|+.+|+.+.+. +|++|||+|
T Consensus 332 ~v~~~~~~~~~~l~a~~~~A----dv~v~~s~~EG~~lv~~Ea~a~~~p~~~g~lIlS~~~G~~~~l~---~g~lVnP~d 404 (456)
T d1uqta_ 332 LYYLNQHFDRKLLMKIFRYS----DVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANELT---SALIVNPYD 404 (456)
T ss_dssp EEEECSCCCHHHHHHHHHHC----SEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTCT---TSEEECTTC
T ss_pred EEECCCCCCHHHHHHHHHHH----CEEECCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCCHHHHC---CEEEECCCC
T ss_conf 02115876788876777530----54525876578883999999908988897589728978778859---769989599
Q ss_pred HHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 9999999999971-99999999999989944099899999999999803399
Q 001541 620 QQSVADALLKLVA-DKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIAGCKPR 670 (1057)
Q Consensus 620 ~e~la~aI~~ll~-d~~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~~~~~~ 670 (1057)
++++|++|.++|+ ++++++++.+++++++.+|++..|++.|++.++++..|
T Consensus 405 ~~~~A~ai~~aL~~~~~er~~~~~~~~~~v~~~~~~~W~~~fl~~l~~~~~r 456 (456)
T d1uqta_ 405 RDEVAAALDRALTMSLAERISRHAEMLDVIVKNDINHWQECFISDLKQIVPR 456 (456)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
T ss_conf 9999999999974999999999999989999789999999999998755179
|
| >d1s2oa1 c.108.1.10 (A:1-244) Sucrose-phosphatase Slr0953 {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sucrose-phosphatase Slr0953 species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=100.00 E-value=8.3e-34 Score=237.03 Aligned_cols=240 Identities=14% Similarity=0.228 Sum_probs=183.0
Q ss_pred CCEEEEEEECCCCC-C-CCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 66599998317999-7-403999999999984403898389997899988899999938999999986996799579824
Q 001541 773 RKHIFVISVDCDST-T-GLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 773 ~kkliv~DiDGTL~-~-~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~~ 850 (1057)
++.|||+|+||||. . ..+ +..+++.++++. |+.|+|+|||++.++.++++.+++. .|+++||+||+.|+++
T Consensus 2 ~~~li~~DlDGTL~~~~~~~-~~~~~~~~~~~~----g~~v~i~TGR~~~~~~~~~~~~~~~--~~~~~i~~~G~~i~~~ 74 (244)
T d1s2oa1 2 RQLLLISDLDNTWVGDQQAL-EHLQEYLGDRRG----NFYLAYATGRSYHSARELQKQVGLM--EPDYWLTAVGSEIYHP 74 (244)
T ss_dssp CSEEEEECTBTTTBSCHHHH-HHHHHHHHTTGG----GEEEEEECSSCHHHHHHHHHHHTCC--CCSEEEETTTTEEEET
T ss_pred CCEEEEEECCCCCCCCCCCH-HHHHHHHHHHCC----CCEEEEECCCCHHHHHHHHHHCCCC--CCCEEEECCCEEEEEC
T ss_conf 76699998966679999898-999999999819----9989998899989999999973998--7765885162599971
Q ss_pred CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH
Q ss_conf 57888998422421011002344623499999986210133222356653455322468626899932999993089999
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 930 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~el~ 930 (1057)
.. .+..|..++.+.|..+.+..+........... ...+..+++++...........+++.
T Consensus 75 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (244)
T d1s2oa1 75 EG--------LDQHWADYLSEHWQRDILQAIADGFEALKPQS------------PLEQNPWKISYHLDPQACPTVIDQLT 134 (244)
T ss_dssp TE--------ECHHHHHHHHTTCCHHHHHHHHHTCTTEEECC------------GGGCBTTBEEEEECTTSCTHHHHHHH
T ss_pred CC--------CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC------------HHHHCCEEEEEECCCCCCHHHHHHHH
T ss_conf 67--------41678988878876879999985355433257------------24406268999525211589999999
Q ss_pred HHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHH
Q ss_conf 99987359089999608915997129999999999999994998454899956888877011026766089937976113
Q 001541 931 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 1010 (1057)
Q Consensus 931 ~~L~~~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMgNa~~~~ 1010 (1057)
..+......+....+.+. .+||+|.+++||.|+++|++++|++.+++++ +||+.| | ++||+.++++|+|+||. .
T Consensus 135 ~~~~~~~~~~~~~~~~~~-~~~i~~~~~~K~~a~~~l~~~~gi~~~~~v~-~GD~~N-D-~~Ml~~~~~~vav~na~--~ 208 (244)
T d1s2oa1 135 EMLKETGIPVQVIFSSGK-DVDLLPQRSNKGNATQYLQQHLAMEPSQTLV-CGDSGN-D-IGLFETSARGVIVRNAQ--P 208 (244)
T ss_dssp HHHHTSSCCEEEEEETTT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEE-EECSGG-G-HHHHTSSSEEEECTTCC--H
T ss_pred HHHHHHCCCCEEEECCCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEE-ECCCCC-C-HHHHHHCCCEEEECCCC--H
T ss_conf 999863234126630781-8999867641557788887741577303799-758887-7-99996189189967999--9
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 433100299999987768999738815777858999999970965
Q 001541 1011 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 1011 ~~~~~a~~~~~~~d~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~i 1055 (1057)
+.+..++. ..+...|+|.....+||.+||+||++|
T Consensus 209 ~lk~~a~~----------~~~~~~~~~~~~~~~Gi~e~l~~f~~l 243 (244)
T d1s2oa1 209 ELLHWYDQ----------WGDSRHYRAQSSHAGAILEAIAHFDFL 243 (244)
T ss_dssp HHHHHHHH----------HCCTTEEECSSCHHHHHHHHHHHTTCC
T ss_pred HHHHHHHC----------CCCCCEEECCCCCCCHHHHHHHHHCCC
T ss_conf 99998632----------366653771899714899999982867
|
| >d1nrwa_ c.108.1.10 (A:) Hypothetical protein YwpJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YwpJ species: Bacillus subtilis [TaxId: 1423]
Probab=100.00 E-value=6.9e-32 Score=224.38 Aligned_cols=243 Identities=14% Similarity=0.093 Sum_probs=155.8
Q ss_pred EEEEEEECCCC---CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECC
Q ss_conf 59999831799---974039999999999844038983899978999888999999389999999869967995798245
Q 001541 775 HIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYST 851 (1057)
Q Consensus 775 kliv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~~~ 851 (1057)
|+||+|+|||| .+.+++.+.++|++++++ |+.|++||||++..+.+++..+++. +++||.||+.|+++.
T Consensus 2 Kli~~DlDGTLl~~~~~i~~~~~~~l~~l~~~----Gi~~~i~TGR~~~~~~~~~~~l~~~----~~~i~~nG~~i~~~~ 73 (285)
T d1nrwa_ 2 KLIAIDLDGTLLNSKHQVSLENENALRQAQRD----GIEVVVSTGRAHFDVMSIFEPLGIK----TWVISANGAVIHDPE 73 (285)
T ss_dssp CEEEEECCCCCSCTTSCCCHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHGGGTCC----CEEEEGGGTEEECTT
T ss_pred EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCC----CEEEECCCEEEEECC
T ss_conf 09999788664188794199999999999978----8999999799989999999980998----589954731699568
Q ss_pred CCCC-CCCCCCCC-----CCH-HH-----------C-CCCCCHHHHHHHHHHHHHCCCC---------------CCCCCC
Q ss_conf 7888-99842242-----101-10-----------0-2344623499999986210133---------------222356
Q 001541 852 LNSE-DGPFVVDF-----YYH-SH-----------I-EYRWGGEGLRKTLVRWASQVTD---------------KKAESG 897 (1057)
Q Consensus 852 ~~~~-~~~~~~d~-----~~~-~~-----------i-~~~w~~e~l~~~~~~~~~~~~~---------------~~~~~~ 897 (1057)
+... ...+..+. .|. .+ + ...+..+.+......+.....+ ......
T Consensus 74 ~~~i~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (285)
T d1nrwa_ 74 GRLYHHETIDKKRAYDILSWLESENYYYEVFTGSAIYTPQNGRELLDVELDRFRSANPEADLSVLKQAAEVQYSQSGFAY 153 (285)
T ss_dssp CCEEEECCCCHHHHHHHHHHHHHTTCEEEEEESSCEEECCCHHHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCEEE
T ss_pred CCEEEECCCCHHHHHHHHHHHHHCCCCEEEECCCEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCEE
T ss_conf 74356416888999999999997697168741764886066377777777766405742105565333333310145201
Q ss_pred CCCCCCCC-CCCCCCEEEEEECCCCCCCCHHHHHHHHH--HHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCC
Q ss_conf 65345532-24686268999329999930899999998--7359089999608915997129999999999999994998
Q 001541 898 EKVLTPAE-QLSTNYCYAFSVQKPGMTPPVKELRKVLR--IQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVE 974 (1057)
Q Consensus 898 ~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~el~~~L~--~~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~ 974 (1057)
...+.+.. .........+. .... ..+.+...+. .....+.++.+.+. ++||+|+++|||.||++|++++|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~s~~~-~ldi~~~~~~K~~ai~~l~~~~gi~ 228 (285)
T d1nrwa_ 154 INSFQELFEADEPIDFYNIL-GFSF---FKEKLEAGWKRYEHAEDLTLVSSAEH-NFELSSRKASKGQALKRLAKQLNIP 228 (285)
T ss_dssp CSCGGGGTSSSSCCCEEEEE-EECS---CHHHHHHHHHHHTTCTTEEEECSSTT-EEEEEETTCSHHHHHHHHHHHTTCC
T ss_pred ECHHHHHHHCCCCHHHEEEE-CCCC---HHHHHHHHHHHHHCCCCEEEEEECCC-EEEEECCCCHHHHHHHHHHHHCCCC
T ss_conf 03188876314521120131-1232---18999999998632797699994796-8999555402366898877650557
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHH
Q ss_conf 454899956888877011026766089937976113433100299999987768999738815777858999999970
Q 001541 975 LSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 1052 (1057)
Q Consensus 975 ~~~~vaf~GD~~d~D~ieML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1052 (1057)
++++++ +||+.| | ++||+.++.||||+||. .+.+..|++ +|.++++|||+++|++|
T Consensus 229 ~~~vi~-~GD~~N-D-~~Ml~~a~~svam~na~--~~~k~~A~~-----------------v~~~~~~~Gv~~~l~~l 284 (285)
T d1nrwa_ 229 LEETAA-VGDSLN-D-KSMLEAAGKGVAMGNAR--EDIKSIADA-----------------VTLTNDEHGVAHMMKHL 284 (285)
T ss_dssp GGGEEE-EESSGG-G-HHHHHHSSEEEECTTCC--HHHHHHCSE-----------------ECCCGGGTHHHHHHHHT
T ss_pred CCCEEE-EECCHH-H-HHHHHHCCEEEEECCCC--HHHHHHCCE-----------------ECCCCCCCHHHHHHHHH
T ss_conf 204999-929788-8-99998489189968998--999985898-----------------82788755899999986
|
| >d2rbka1 c.108.1.10 (A:2-261) Sugar-phosphate phosphatase BT4131 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar-phosphate phosphatase BT4131 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=100.00 E-value=5.9e-34 Score=237.99 Aligned_cols=233 Identities=12% Similarity=0.112 Sum_probs=153.7
Q ss_pred EEEEEEECCCC-C---CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 59999831799-9---7403999999999984403898389997899988899999938999999986996799579824
Q 001541 775 HIFVISVDCDS-T---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 775 kliv~DiDGTL-~---~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~~ 850 (1057)
|+||||+|||| . ..+++.++++|++++++ |+.|++||||++..+..+....++. .++++||+||+.||++
T Consensus 2 k~if~DlDGTL~~~~~~~i~~~~~~al~~l~~~----gi~v~~~TGR~~~~~~~l~~~~~~~--~~~~~I~~nGa~i~~~ 75 (260)
T d2rbka1 2 KALFFDIDGTLVSFETHRIPSSTIEALEAAHAK----GLKIFIATGRPKAIINNLSELQDRN--LIDGYITMNGAYCFVG 75 (260)
T ss_dssp CEEEECSBTTTBCTTTSSCCHHHHHHHHHHHHT----TCEEEEECSSCGGGCCSCHHHHHTT--CCCEEEEGGGTEEEET
T ss_pred EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHHCC--CCCCEEECCCCCCCCC
T ss_conf 299998888871899799899999999999978----8999998899889999999997158--8773476277401257
Q ss_pred CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH-HC-CCCCCCC-------------------CCCC-CCCCCCCCC
Q ss_conf 578889984224210110023446234999999862-10-1332223-------------------5665-345532246
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWA-SQ-VTDKKAE-------------------SGEK-VLTPAEQLS 908 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~-~~-~~~~~~~-------------------~~~~-~~~~~~~~~ 908 (1057)
+.. .+...++.....+.+. ++.+.. .. ....... ...+ .-..+....
T Consensus 76 ~~~----------i~~~~l~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (260)
T d2rbka1 76 EEV----------IYKSAIPQEEVKAMAA-FCEKKGVPCIFVEEHNISVCQPNEMVKKIFYDFLHVNVIPTVSFEEASNK 144 (260)
T ss_dssp TEE----------EEECCCCHHHHHHHHH-HHHHHTCCEEEECSSCEEEESCCHHHHHHTTTTTCCCCCCBCCHHHHHTS
T ss_pred CCC----------CCCCCCCHHHHHHHHH-HHHHCCCCEEEEECCCEEECCCHHHHHHHHHHHHCCCCCCCCCHHHHCCC
T ss_conf 532----------1046788899999999-99973986899835755413640789999998632576765677673676
Q ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCC
Q ss_conf 86268999329999930899999998735908999960891599712999999999999999499845489995688887
Q 001541 909 TNYCYAFSVQKPGMTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDT 988 (1057)
Q Consensus 909 ~~~~~s~~~~~~~~~~~~~el~~~L~~~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~ 988 (1057)
...++.... . ++....+......+.+..+.+. ++||+|.++||+.||++|++++|++++++++ +||++|
T Consensus 145 ~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~~~~~-~~ei~p~~~sK~~al~~l~~~~~i~~~~~~a-~GD~~N- 213 (260)
T d2rbka1 145 EVIQMTPFI-------T-EEEEKEVLPSIPTCEIGRWYPA-FADVTAKGDTKQKGIDEIIRHFGIKLEETMS-FGDGGN- 213 (260)
T ss_dssp CCSEEEECC-------C-HHHHHHHGGGSTTCEEECSSTT-CCEEESTTCSHHHHHHHHHHHHTCCGGGEEE-EECSGG-
T ss_pred CEEEEEECC-------C-HHHHHHHHHHHCCCCCEEECCC-EEEEEECCCCHHHHHHHHHHHCCCCHHHEEE-ECCCCC-
T ss_conf 469885127-------8-8999999987215540145586-7999748899999999998732235755167-658855-
Q ss_pred CCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 7011026766089937976113433100299999987768999738815777858999999970965
Q 001541 989 DYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 989 D~ieML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~i 1055 (1057)
| ++||+.++.||||+||. .+.+..|+ |+|++++++||+++|+||++|
T Consensus 214 D-~~Ml~~a~~svav~na~--~~lk~~A~-----------------~vt~~~~~~Gv~~~l~~~~~~ 260 (260)
T d2rbka1 214 D-ISMLRHAAIGVAMGQAK--EDVKAAAD-----------------YVTAPIDEDGISKAMKHFGII 260 (260)
T ss_dssp G-HHHHHHSSEEEECTTSC--HHHHHHSS-----------------EECCCGGGTHHHHHHHHHTCC
T ss_pred C-HHHHHHCCEEEEECCCC--HHHHHHCC-----------------EEECCCCCCHHHHHHHHHCCC
T ss_conf 5-99998489089958998--99998479-----------------780888756899999985889
|
| >d1rkqa_ c.108.1.10 (A:) Hypothetical protein YidA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein YidA species: Escherichia coli [TaxId: 562]
Probab=100.00 E-value=2.6e-31 Score=220.60 Aligned_cols=233 Identities=12% Similarity=0.134 Sum_probs=158.4
Q ss_pred CCEEEEEEECCCC---CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEE
Q ss_conf 6659999831799---9740399999999998440389838999789998889999993899999998699679957982
Q 001541 773 RKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 773 ~kkliv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~ 849 (1057)
..||||||+|||| .+.+++.++++|++++++ |+.|+|||||++..+.++++.+++.. .++++|++||+.++.
T Consensus 3 ~iKli~~DlDGTL~~~~~~i~~~~~~al~~L~~~----gi~v~i~TGR~~~~~~~~~~~l~l~~-~~~~~i~~nGa~i~~ 77 (271)
T d1rkqa_ 3 AIKLIAIDMDGTLLLPDHTISPAVKNAIAAARAR----GVNVVLTTGRPYAGVHNYLKELHMEQ-PGDYCITYNGALVQK 77 (271)
T ss_dssp CCCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHT----TCEEEEECSSCGGGTHHHHHHTTCCS-TTCEEEEGGGTEEEE
T ss_pred CEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCCC-CCCEEEECCCEEEEC
T ss_conf 7069999577664389795199999999999978----99999998999899999999846768-985899868516750
Q ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHH-------------------------------HHHHHCCCCCCCCCCC
Q ss_conf 457888998422421011002344623499999-------------------------------9862101332223566
Q 001541 850 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTL-------------------------------VRWASQVTDKKAESGE 898 (1057)
Q Consensus 850 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~-------------------------------~~~~~~~~~~~~~~~~ 898 (1057)
..... ... ...+..+...... ..+........
T Consensus 78 ~~~~~----~i~--------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 140 (271)
T d1rkqa_ 78 AADGS----TVA--------QTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVF----- 140 (271)
T ss_dssp TTTCC----EEE--------ECCBCHHHHHHHHHHHHHHTCEEEEECSSCEEECCSSCCHHHHHHHHHTTCCEEE-----
T ss_pred CCCCE----EEE--------EECCCHHHHHHHHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCCCCCCC-----
T ss_conf 67770----898--------5020077888878888861640788731327740566116777777640576100-----
Q ss_pred CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH-HCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCC
Q ss_conf 5345532246862689993299999308999999987-359089999608915997129999999999999994998454
Q 001541 899 KVLTPAEQLSTNYCYAFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSK 977 (1057)
Q Consensus 899 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~ 977 (1057)
...+.......+.......++. ...++.+.+.. ......++.+.+. ++||+|+++|||.||++|+++++++.++
T Consensus 141 -~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~~~~~~~~~~~~~~-~~~i~p~~~~K~~al~~l~~~~~i~~~~ 215 (271)
T d1rkqa_ 141 -CEAEKMDPNTQFLKVMMIDEPA---ILDQAIARIPQEVKEKYTVLKSAPY-FLEILDKRVNKGTGVKSLADVLGIKPEE 215 (271)
T ss_dssp -CCGGGSCTTCCBCEEEEECCHH---HHHHHHHHSCHHHHHHEEEEEEETT-EEEEEETTCSHHHHHHHHHHHHTCCGGG
T ss_pred -CHHHHCCCCCCEEEEEEECCHH---HHHHHHHHHHHHHHCCEEEEEECCC-EEEECCCCCCCCCCCCEEHHHCCCCHHC
T ss_conf -3165507655458999946777---8999999999985056389995472-6885278887654200001100114201
Q ss_pred EEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCC
Q ss_conf 89995688887701102676608993797611343310029999998776899973881577785899999997096
Q 001541 978 MVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGL 1054 (1057)
Q Consensus 978 ~vaf~GD~~d~D~ieML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~ 1054 (1057)
+++ +||+.| | ++||+.+++||||+||. .+.+..|+. +|.++.++||+++|++|-+
T Consensus 216 ii~-~GD~~N-D-~~ml~~~~~~~am~na~--~~lk~~a~~-----------------i~~~~~~~Gv~~~l~~~~l 270 (271)
T d1rkqa_ 216 IMA-IGDQEN-D-IAMIEYAGVGVAVDNAI--PSVKEVANF-----------------VTKSNLEDGVAFAIEKYVL 270 (271)
T ss_dssp EEE-EECSGG-G-HHHHHHSSEEEECTTSC--HHHHHHCSE-----------------ECCCTTTTHHHHHHHHHTT
T ss_pred EEE-EECCHH-H-HHHHHHCCCEEEECCCC--HHHHHHCCE-----------------ECCCCCCCHHHHHHHHHHC
T ss_conf 799-918676-7-99998589189967987--999985898-----------------8388985839999999847
|
| >d1rlma_ c.108.1.10 (A:) Sugar phosphatase SupH (YbiV) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Sugar phosphatase SupH (YbiV) species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=9.3e-32 Score=223.53 Aligned_cols=239 Identities=13% Similarity=0.148 Sum_probs=155.1
Q ss_pred CEEEEEEECCCCC---CCC-HHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEE
Q ss_conf 6599998317999---740-399999999998440389838999789998889999993899999998699679957982
Q 001541 774 KHIFVISVDCDST---TGL-LDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 774 kkliv~DiDGTL~---~~i-~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~ 849 (1057)
-|+||||+||||. +.+ ++.++++|++++++ |+.|+|||||++.++.++++++++ ..++||+||+.|++
T Consensus 2 IKli~~DlDGTLl~~~~~~~~~~~~~~l~~l~~~----gi~~~i~TGR~~~~~~~~~~~l~~----~~~~i~~nGa~i~~ 73 (269)
T d1rlma_ 2 VKVIVTDMDGTFLNDAKTYNQPRFMAQYQELKKR----GIKFVVASGNQYYQLISFFPELKD----EISFVAENGALVYE 73 (269)
T ss_dssp CCEEEECCCCCCSCTTSCCCHHHHHHHHHHHHHH----TCEEEEECSSCHHHHGGGCTTTTT----TSEEEEGGGTEEEE
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCC----CCCEEEECEEEEEE
T ss_conf 7999994775672799839969999999999978----998999959998999999998286----66267412169998
Q ss_pred CCCCCCCCCCCCCCC------CHHH--C-------CCCC-CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf 457888998422421------0110--0-------2344-6234999999862101332223566534553224686268
Q 001541 850 STLNSEDGPFVVDFY------YHSH--I-------EYRW-GGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCY 913 (1057)
Q Consensus 850 ~~~~~~~~~~~~d~~------~~~~--i-------~~~w-~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 913 (1057)
++.......+..+.. +... + ...+ .................... ...-........+++
T Consensus 74 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 148 (269)
T d1rlma_ 74 HGKQLFHGELTRHESRIVIGELLKDKQLNFVACGLQSAYVSENAPEAFVALMAKHYHRLK-----PVKDYQEIDDVLFKF 148 (269)
T ss_dssp TTEEEEECCCCHHHHHHHHHHHHTCTTCEEEEEESSCEEEETTSCHHHHHHHHTTCSSEE-----EESCGGGCCSCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCCC-----CCCCHHHHCCHHEEE
T ss_conf 990899732665888999999986248429998157368846881889999875234552-----025376622102477
Q ss_pred EEEECCCCCCCCHHHHHHHHHH-HCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCC
Q ss_conf 9993299999308999999987-359089999608915997129999999999999994998454899956888877011
Q 001541 914 AFSVQKPGMTPPVKELRKVLRI-QALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEG 992 (1057)
Q Consensus 914 s~~~~~~~~~~~~~el~~~L~~-~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ie 992 (1057)
..... . ....++.+.+.. ....+..+.+... ++||+|+++|||.||++|++++|++++++++ +||+.| | ++
T Consensus 149 ~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~di~p~~~sK~~al~~l~~~lgi~~~~vi~-~GD~~N-D-~~ 220 (269)
T d1rlma_ 149 SLNLP-D---EQIPLVIDKLHVALDGIMKPVTSGFG-FIDLIIPGLHKANGISRLLKRWDLSPQNVVA-IGDSGN-D-AE 220 (269)
T ss_dssp EEECC-G---GGHHHHHHHHHHHTTTSSEEEECSTT-EEEEECTTCSHHHHHHHHHHHHTCCGGGEEE-EECSGG-G-HH
T ss_pred EECCC-H---HHHHHHHHHHHHHHHCCEEEEEECCC-EEEEECCCHHHHHHHHHHHHHHCCCCCCEEE-ECCCCC-H-HH
T ss_conf 75088-8---99999999999985153389997582-6888458657778888776650214241899-908844-1-99
Q ss_pred CCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHH
Q ss_conf 026766089937976113433100299999987768999738815777858999999970
Q 001541 993 LLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQL 1052 (1057)
Q Consensus 993 ML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~~~~~~~vt~~~~~dgI~~aL~~~ 1052 (1057)
||+.+++||||+||. .+.+..|+ |+|.+++++||+.+|+++
T Consensus 221 Ml~~ag~~vam~Na~--~~lk~~A~-----------------~v~~~~~~~Gva~~i~~~ 261 (269)
T d1rlma_ 221 MLKMARYSFAMGNAA--ENIKQIAR-----------------YATDDNNHEGALNVIQAV 261 (269)
T ss_dssp HHHHCSEEEECTTCC--HHHHHHCS-----------------EECCCGGGTHHHHHHHHH
T ss_pred HHHHCCEEEEECCCC--HHHHHHCC-----------------EECCCCCCCHHHHHHHHH
T ss_conf 998589189958998--99998478-----------------881889845999999999
|
| >d1nf2a_ c.108.1.10 (A:) Hypothetical protein TM0651 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Hypothetical protein TM0651 species: Thermotoga maritima [TaxId: 2336]
Probab=99.97 E-value=4.8e-31 Score=218.85 Aligned_cols=239 Identities=12% Similarity=0.137 Sum_probs=156.2
Q ss_pred CEEEEEEECCCC---CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 659999831799---97403999999999984403898389997899988899999938999999986996799579824
Q 001541 774 KHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkliv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|+||||+|||| .+.+++.++++|+++++. + .|+|+|||++..+.+.+.+++.. ...+||+||+.|+.+
T Consensus 2 ~Kli~~DlDGTL~~~~~~i~~~~~~al~~l~~~----~-~~~i~TGR~~~~~~~~~~~~~~~---~~~~I~~nGa~i~~~ 73 (267)
T d1nf2a_ 2 YRVFVFDLDGTLLNDNLEISEKDRRNIEKLSRK----C-YVVFASGRMLVSTLNVEKKYFKR---TFPTIAYNGAIVYLP 73 (267)
T ss_dssp BCEEEEECCCCCSCTTSCCCHHHHHHHHHHTTT----S-EEEEECSSCHHHHHHHHHHHSSS---CCCEEEGGGTEEEET
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC----C-EEEEECCCCHHHHHHHHHHHCCC---CCCEECCCCEEEEEC
T ss_conf 499999177565489594499999999999749----9-79998999858889999984656---773113698289954
Q ss_pred CCCCC-CCCCCCCC-------------CCHHHCCC----CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCE
Q ss_conf 57888-99842242-------------10110023----44623499999986210133222356653455322468626
Q 001541 851 TLNSE-DGPFVVDF-------------YYHSHIEY----RWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYC 912 (1057)
Q Consensus 851 ~~~~~-~~~~~~d~-------------~~~~~i~~----~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 912 (1057)
+...- ...+..+. .+...... ......+..... ......... +...+........+
T Consensus 74 ~~~~i~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~ 147 (267)
T d1nf2a_ 74 EEGVILNEKIPPEVAKDIIEYIKPLNVHWQAYIDDVLYSEKDNEEIKSYAR-HSNVDYRVE-----PNLSELVSKMGTTK 147 (267)
T ss_dssp TTEEEEECCBCHHHHHHHHHHHGGGCCCEEEECSSCEEESSCCHHHHHHHH-HTTCCEEEC-----TTHHHHHHHHCBSE
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCEEEECCCCHHHHHHHH-HCCCCCEEC-----CCHHHHHHHCCCEE
T ss_conf 666432457998999999999973384278740766886277488898988-607872204-----76888744116237
Q ss_pred EEEEECCCCCCCCHHHHHHHHHHH-CCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
Q ss_conf 899932999993089999999873-5908999960891599712999999999999999499845489995688887701
Q 001541 913 YAFSVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYE 991 (1057)
Q Consensus 913 ~s~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~i 991 (1057)
+.+. .++ ..++++.+.+... ...+.++.+.+. ++||+|+++|||.||++|++++|++.+++++ +||+.| | +
T Consensus 148 i~~~-~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~-~~di~~~~~~K~~ai~~l~~~~~i~~~~vva-~GD~~N-D-~ 219 (267)
T d1nf2a_ 148 LLLI-DTP---ERLDELKEILSERFKDVVKVFKSFPT-YLEIVPKNVDKGKALRFLRERMNWKKEEIVV-FGDNEN-D-L 219 (267)
T ss_dssp EEEE-CCH---HHHHHHHHHHHHHHTTTSEEEEEETT-EEEEECTTCCHHHHHHHHHHHHTCCGGGEEE-EECSHH-H-H
T ss_pred EEEE-CCH---HHHHHHHHHHHHHHCCCEEEEEEECC-EEEECCCCCCHHHHHHHHHHHHCCCCCCEEE-ECCCCC-H-H
T ss_conf 8884-559---99999999998860783899996211-4565587775167899998860368220899-808844-0-9
Q ss_pred CCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHC
Q ss_conf 10267660899379761134331002999999877689997388157778589999999709
Q 001541 992 GLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 992 eML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~~~~~~~vt~~~~~dgI~~aL~~~g 1053 (1057)
+||+.++.||||+||. .+.+.+|+. +|.+++++||+++|+++-
T Consensus 220 ~ml~~~~~sva~~na~--~~~k~~A~~-----------------i~~~~~~~Gva~~i~~ll 262 (267)
T d1nf2a_ 220 FMFEEAGLRVAMENAI--EKVKEASDI-----------------VTLTNNDSGVSYVLERIS 262 (267)
T ss_dssp HHHTTCSEEEECTTSC--HHHHHHCSE-----------------ECCCTTTTHHHHHHTTBC
T ss_pred HHHHHCCCEEEECCCC--HHHHHHCCE-----------------ECCCCCCCHHHHHHHHHH
T ss_conf 9998689089948998--999985898-----------------858887538999999998
|
| >d1l6ra_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.96 E-value=2.2e-27 Score=194.75 Aligned_cols=220 Identities=13% Similarity=0.154 Sum_probs=158.0
Q ss_pred CEEEEEEECCCCC---CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 6599998317999---7403999999999984403898389997899988899999938999999986996799579824
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkliv~DiDGTL~---~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|+++||+||||+ ..+++.+.++++.++++ |+.|+++|||++..+..+...+++. ..+|+.||+.++.+
T Consensus 3 iKli~~D~DGTL~~~~~~i~~~~~~al~~l~~~----g~~v~~~TGr~~~~~~~~~~~~~~~----~~~i~~~G~~~~~~ 74 (225)
T d1l6ra_ 3 IRLAAIDVDGNLTDRDRLISTKAIESIRSAEKK----GLTVSLLSGNVIPVVYALKIFLGIN----GPVFGENGGIMFDN 74 (225)
T ss_dssp CCEEEEEHHHHSBCTTSCBCHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTCC----SCEEEGGGTEEECT
T ss_pred EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCC----CEEEEECCEEEEEC
T ss_conf 089999658877389994799999999999877----9989998288603269999981988----52886041699967
Q ss_pred CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH
Q ss_conf 57888998422421011002344623499999986210133222356653455322468626899932999993089999
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 930 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~el~ 930 (1057)
... +...|..+.+.+++........... .. ..........+.. + ....+.+.
T Consensus 75 ~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~~~~~~~-~---~~~~~~~~ 126 (225)
T d1l6ra_ 75 DGS---------------IKKFFSNEGTNKFLEEMSKRTSMRS-------IL--TNRWREASTGFDI-D---PEDVDYVR 126 (225)
T ss_dssp TSC---------------EEESSCSHHHHHHHHHHTTTSSCBC-------CG--GGGGCSSSEEEBC-C---GGGHHHHH
T ss_pred CCC---------------EEEECCHHHHHHHHHHHHHHCCCCE-------EE--CCCCEEEEECCCC-C---HHHHHHHH
T ss_conf 951---------------7873686899999999987348542-------42--0322023100235-8---99999999
Q ss_pred HHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHH
Q ss_conf 99987359089999608915997129999999999999994998454899956888877011026766089937976113
Q 001541 931 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 1010 (1057)
Q Consensus 931 ~~L~~~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMgNa~~~~ 1010 (1057)
..+... ... +...+. .+||+|.++||+.|+++|++++|++++++++ +||+.| | ++||+.++.+|||+||. .
T Consensus 127 ~~~~~~--~~~-i~~~~~-~~~i~~~~~~K~~ai~~l~~~~~i~~~~v~~-~GDs~n-D-~~m~~~a~~~vav~na~--~ 197 (225)
T d1l6ra_ 127 KEAESR--GFV-IFYSGY-SWHLMNRGEDKAFAVNKLKEMYSLEYDEILV-IGDSNN-D-MPMFQLPVRKACPANAT--D 197 (225)
T ss_dssp HHHHTT--TEE-EEEETT-EEEEEETTCSHHHHHHHHHHHTTCCGGGEEE-ECCSGG-G-HHHHTSSSEEEECTTSC--H
T ss_pred HHHHHC--CCE-EEECCC-EEEECCCCCCHHHHHHHHHHHHCCCHHHEEE-ECCCCC-H-HHHHHHCCEEEEECCCC--H
T ss_conf 987425--729-998891-7996387652278999876651002302256-448843-5-99999779089988975--9
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 433100299999987768999738815777858999999970965
Q 001541 1011 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 1011 ~~~~~a~~~~~~~d~~~~~~~~~~~vt~~~~~dgI~~aL~~~g~i 1055 (1057)
+.+..|+ ++++.+..+||+.+|++|++|
T Consensus 198 ~~k~~ad-----------------~v~~~~~~~gi~~~l~~~~l~ 225 (225)
T d1l6ra_ 198 NIKAVSD-----------------FVSDYSYGEEIGQIFKHFELM 225 (225)
T ss_dssp HHHHHCS-----------------EECSCCTTHHHHHHHHHTTCC
T ss_pred HHHHHCC-----------------EEECCCCCCHHHHHHHHHCCC
T ss_conf 9998499-----------------998989848899999986789
|
| >d1wr8a_ c.108.1.10 (A:) Phosphoglycolate phosphatase, PGPase {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphoglycolate phosphatase, PGPase species: Pyrococcus horikoshii [TaxId: 53953]
Probab=99.95 E-value=7.7e-27 Score=191.14 Aligned_cols=222 Identities=13% Similarity=0.108 Sum_probs=151.9
Q ss_pred CEEEEEEECCCCC---CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEC
Q ss_conf 6599998317999---7403999999999984403898389997899988899999938999999986996799579824
Q 001541 774 KHIFVISVDCDST---TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYS 850 (1057)
Q Consensus 774 kkliv~DiDGTL~---~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~~ 850 (1057)
.|+|+||+||||. +.+++.++++|+++++. |+.|+++|||++..+..++..+++. +.+||.||+.+++.
T Consensus 2 iK~i~~D~DGTL~~~~~~i~~~~~~~l~~l~~~----gi~v~~~TGR~~~~~~~~~~~~~~~----~~~i~~~g~~~~~~ 73 (230)
T d1wr8a_ 2 IKAISIDIDGTITYPNRMIHEKALEAIRRAESL----GIPIMLVTGNTVQFAEAASILIGTS----GPVVAEDGGAISYK 73 (230)
T ss_dssp CCEEEEESTTTTBCTTSCBCHHHHHHHHHHHHT----TCCEEEECSSCHHHHHHHHHHHTCC----SCEEEGGGTEEEET
T ss_pred CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHCCCC----CCCCCCCCEEEECC
T ss_conf 369999167777379894699999999999867----9959999278688899999864887----32001222010024
Q ss_pred CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHH
Q ss_conf 57888998422421011002344623499999986210133222356653455322468626899932999993089999
Q 001541 851 TLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVKELR 930 (1057)
Q Consensus 851 ~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~el~ 930 (1057)
... .+.......+ .........++...... . .......+ +...... ..+.++
T Consensus 74 ~~~----------~~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~---~~~~~~~~-~~~~~~~---~~~~~~ 125 (230)
T d1wr8a_ 74 KKR----------IFLASMDEEW--ILWNEIRKRFPNARTSY---------T---MPDRRAGL-VIMRETI---NVETVR 125 (230)
T ss_dssp TEE----------EESCCCSHHH--HHHHHHHHHCTTCCBCT---------T---GGGCSSCE-EECTTTS---CHHHHH
T ss_pred CCC----------CCCCCCCHHH--HHHHHHHHHCCCCCCEE---------E---CCCCEEEE-EEECCCC---CHHHHH
T ss_conf 210----------0023441889--99999998626654214---------4---14422458-9934611---699999
Q ss_pred HHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHH
Q ss_conf 99987359089999608915997129999999999999994998454899956888877011026766089937976113
Q 001541 931 KVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSS 1010 (1057)
Q Consensus 931 ~~L~~~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMgNa~~~~ 1010 (1057)
+.+........ ..+.+. .+||+|.++||+.|++++++++|++++++++ +||+.| | ++||+.++.||||+||. .
T Consensus 126 ~~~~~~~~~~~-~~~~~~-~iei~~~~~~K~~al~~l~~~~~i~~~~~~~-iGD~~N-D-i~ml~~ag~~vav~na~--~ 198 (230)
T d1wr8a_ 126 EIINELNLNLV-AVDSGF-AIHVKKPWINKGSGIEKASEFLGIKPKEVAH-VGDGEN-D-LDAFKVVGYKVAVAQAP--K 198 (230)
T ss_dssp HHHHHTTCSCE-EEECSS-CEEEECTTCCHHHHHHHHHHHHTSCGGGEEE-EECSGG-G-HHHHHHSSEEEECTTSC--H
T ss_pred HHHHHHCCCEE-EEECCC-EEEEEECCCCCCHHHCCCCCCCCCCHHHEEE-EECCCC-H-HHHHHHCCEEEEECCCC--H
T ss_conf 99998366528-960894-8999407767613320112110013324256-626730-7-99999789079988987--9
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHH----HHCCC
Q ss_conf 4331002999999877689997388157778589999999----70965
Q 001541 1011 SNQIHANRSYPLSDVMPIDSPNIVQTPEDCTTSDIRSSLE----QLGLL 1055 (1057)
Q Consensus 1011 ~~~~~a~~~~~~~d~~~~~~~~~~~vt~~~~~dgI~~aL~----~~g~i 1055 (1057)
+.+.+|+ +++.+.+.+||.++++ ++|+|
T Consensus 199 ~~k~~A~-----------------~v~~~~~~~gv~~~i~~~l~~~g~~ 230 (230)
T d1wr8a_ 199 ILKENAD-----------------YVTKKEYGEGGAEAIYHILEKFGYL 230 (230)
T ss_dssp HHHTTCS-----------------EECSSCHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHCC-----------------EEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 9998579-----------------9989998478999999999972899
|
| >d2b30a1 c.108.1.10 (A:18-300) PFL1270w orthologue {Plasmodium vivax [TaxId: 5855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: PFL1270w orthologue species: Plasmodium vivax [TaxId: 5855]
Probab=99.95 E-value=6.3e-27 Score=191.69 Aligned_cols=244 Identities=13% Similarity=0.096 Sum_probs=154.7
Q ss_pred CCCCEEEEEEECCCCC----CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCC--CCCCEEEECCC
Q ss_conf 6766599998317999----74039999999999844038983899978999888999999389999--99986996799
Q 001541 771 RRRKHIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSP--SDFDAFICNSG 844 (1057)
Q Consensus 771 ~~~kkliv~DiDGTL~----~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~--~~~D~lI~~nG 844 (1057)
.+.-|+||||+||||. ..+++.++++|++++++ |+.|+|+|||++.++.+++..+++.. ......||.||
T Consensus 7 ~~~ikli~~DlDGTLl~~~~~~i~~~~~~al~~l~~~----Gi~v~i~TGR~~~~~~~~~~~l~~~~~~~~~~~~i~~~g 82 (283)
T d2b30a1 7 GADIKLLLIDFDGTLFVDKDIKVPSENIDAIKEAIEK----GYMVSICTGRSKVGILSAFGEENLKKMNFYGMPGVYING 82 (283)
T ss_dssp TCCCCEEEEETBTTTBCCTTTCSCHHHHHHHHHHHHH----TCEEEEECSSCHHHHHHHHCHHHHHHHTCCSCSEEEGGG
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEE
T ss_conf 3596199998888884898996799999999999988----998999869998999999998476654555774378754
Q ss_pred CEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHH---CCC-CCCC-------C----------CCCCCCCC
Q ss_conf 5798245788899842242101100234462349999998621---013-3222-------3----------56653455
Q 001541 845 SDLYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWAS---QVT-DKKA-------E----------SGEKVLTP 903 (1057)
Q Consensus 845 a~I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~---~~~-~~~~-------~----------~~~~~~~~ 903 (1057)
+.+|...... .+...+...+..+.+.... .... ... .... . .......+
T Consensus 83 ~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (283)
T d2b30a1 83 TIVYDQIGYT---------LLDETIETDVYAELISYLV-EKNLVNQTIFHRGESNYVTEDNKYADFLQKMYSENRSIIIR 152 (283)
T ss_dssp TEEECTTCCE---------EEECCCCHHHHHHHHHHHH-HTTCGGGEEEEETTEEEEETTCTTTTHHHHHHSCCCCEEEC
T ss_pred EEEECCCCCE---------EEECCCCHHHHHHHHHHHH-HHCCCCEEEEEECCEEEEECCCHHHHHHHHHHHCCCCCCCC
T ss_conf 5898489968---------3102568788899998877-50665158997323068704632778888874116553366
Q ss_pred --C-CCCCCCCEEEEEECCCCCCCCHHHHHHHHHHH-CCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEE
Q ss_conf --3-22468626899932999993089999999873-5908999960891599712999999999999999499845489
Q 001541 904 --A-EQLSTNYCYAFSVQKPGMTPPVKELRKVLRIQ-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMV 979 (1057)
Q Consensus 904 --~-~~~~~~~~~s~~~~~~~~~~~~~el~~~L~~~-~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~v 979 (1057)
+ .......++ ....+.. ..+++.+.+... .....+..+... ++||.|.++||+.|++.|+++++++.++++
T Consensus 153 ~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~~~~K~~~l~~l~~~~~i~~~~vi 227 (283)
T d2b30a1 153 HNEMLKYRTMNKL-MIVLDPS---ESKTVIGNLKQKFKNKLTIFTTYNG-HAEVTKLGHDKYTGINYLLKHYNISNDQVL 227 (283)
T ss_dssp HHHHTTCCCCSEE-EECCCTT---THHHHHHHHHHHSTTTEEEEECTTS-CEEEEETTCCHHHHHHHHHHHTTCCGGGEE
T ss_pred HHHHHHCCCCEEE-EEECCHH---HHHHHHHHHHHHHCCCCEEEEECCE-EEEECCCCCHHHHHHHHHHHHCCCCCCEEE
T ss_conf 7777402661389-9966889---9999999999984566137885240-676247765057788877664100202079
Q ss_pred EEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCC-CCHHHHHHHHHHHCCC
Q ss_conf 995688887701102676608993797611343310029999998776899973881577-7858999999970965
Q 001541 980 VFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIVQTPED-CTTSDIRSSLEQLGLL 1055 (1057)
Q Consensus 980 af~GD~~d~D~ieML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~~~~~~~vt~~-~~~dgI~~aL~~~g~i 1055 (1057)
+ +||+.| | ++||+.+++||||+||. .+.+..|+. +|.. +.++|++++|+++--|
T Consensus 228 ~-~GD~~N-D-~~Ml~~a~~~va~~na~--~~~k~~a~~-----------------v~~~~~~~g~v~~~l~~~~~~ 282 (283)
T d2b30a1 228 V-VGDAEN-D-IAMLSNFKYSFAVANAT--DSAKSHAKC-----------------VLPVSHREGAVAYLLKKVFDL 282 (283)
T ss_dssp E-EECSGG-G-HHHHHSCSEEEECTTCC--HHHHHHSSE-----------------ECSSCTTTTHHHHHHHHHHTT
T ss_pred E-ECCCHH-H-HHHHHHCCCEEEECCCC--HHHHHHCCE-----------------EECCCCCCCHHHHHHHHHHCC
T ss_conf 9-648763-6-99998589189968998--999984899-----------------999848886999999999737
|
| >d2bfwa1 c.87.1.8 (A:218-413) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=99.94 E-value=6.1e-26 Score=185.20 Aligned_cols=193 Identities=23% Similarity=0.297 Sum_probs=154.1
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCE
Q ss_conf 9878986789999999778899999999982279987641799985999984899-978999999999764013599849
Q 001541 431 GMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPD-PKKNITTLVKAFGECRPLRELANL 509 (1057)
Q Consensus 431 GiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~-~~Kgi~~Ll~A~~~l~~~~~~~~l 509 (1057)
|||.+.|.|.... .........+.+.+..+++++|+|+||+. ++||++.+++|+..+......+++
T Consensus 1 gid~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~il~~Grl~~~~Kg~~~li~a~~~l~~~~~~~~~ 67 (196)
T d2bfwa1 1 GIDCSFWNESYLT-------------GSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEM 67 (196)
T ss_dssp CCCTTTSSGGGSC-------------SCHHHHHHHHHHHTTCCSCEEEEEESCBCSSSSCHHHHHHHHHHHTTSGGGGGE
T ss_pred CCCHHHCCCCCCC-------------CHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCE
T ss_conf 9181330898887-------------016899999999959799988999768881104999999998864112578881
Q ss_pred EE-EEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf 99-99508997510010189999999999871999977839999978299999970149939997299899878999999
Q 001541 510 TL-IMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1057)
Q Consensus 510 ~L-IvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~f~g~v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAm 588 (1057)
.+ ++|.++. .+...+..+...+ ...+.+.+.++.+++..+|+.| |++|+|+..|+||++++|||
T Consensus 68 ~l~i~G~g~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~----di~v~ps~~e~~~~~~~Eam 132 (196)
T d2bfwa1 68 RFIIIGKGDP---------ELEGWARSLEEKH--GNVKVITEMLSREFVRELYGSV----DFVIIPSYFEPFGLVALEAM 132 (196)
T ss_dssp EEEEECCBCH---------HHHHHHHHHHHHC--TTEEEECSCCCHHHHHHHHTTC----SEEEECCSCCSSCHHHHHHH
T ss_pred EEEEEEECCC---------CHHHHHHHHHHCC--CEEEEEEECCCCCCCHHCCCCC----CCCCCCCCCCCCCCCCHHHH
T ss_conf 8999961355---------2134543322113--1157753023321100001232----33443222112332201333
Q ss_pred HCCCCEEECCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHCCC
Q ss_conf 83996998388881013303984699199999999999999971-99999999999989944099
Q 001541 589 AHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA-DKQLWARCRQNGLKNIHLFS 652 (1057)
Q Consensus 589 A~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~e~la~aI~~ll~-d~~~~~~~~~~a~~~v~~fs 652 (1057)
+||+|||+++.|+..|++.+ .+|++++|.|+++++++|.+++. +++.+.++++++++++..||
T Consensus 133 ~~G~pvI~~~~~~~~e~i~~-~~g~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~a~~~a~~fs 196 (196)
T d2bfwa1 133 CLGAIPIASAVGGLRDIITN-ETGILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFS 196 (196)
T ss_dssp HTTCEEEEESCHHHHHHCCT-TTCEEECTTCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTC
T ss_pred HCCCEEEECCCCCCCEEECC-CCEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
T ss_conf 14860465178853201028-73146789999999999999995799999999999999998378
|
| >d1wzca1 c.108.1.10 (A:1-243) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=99.93 E-value=2.8e-27 Score=194.00 Aligned_cols=212 Identities=16% Similarity=0.096 Sum_probs=127.6
Q ss_pred CEEEEEEECCCC-CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEECCC
Q ss_conf 659999831799-9740399999999998440389838999789998889999993899999998699679957982457
Q 001541 774 KHIFVISVDCDS-TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYYSTL 852 (1057)
Q Consensus 774 kkliv~DiDGTL-~~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~~~~ 852 (1057)
.|+||+|+|||| +...++.++++|++++++ |+.|++||||++..+.+++..+++. +.+||+||+.|+++..
T Consensus 2 iKli~~DlDGTLl~~~~~~~~~~ai~~l~~~----G~~~~~aTGR~~~~~~~~~~~~~~~----~~~i~~nGa~i~~~~~ 73 (243)
T d1wzca1 2 IRLIFLDIDKTLIPGYEPDPAKPIIEELKDM----GFEIIFNSSKTRAEQEYYRKELEVE----TPFISENGSAIFIPKG 73 (243)
T ss_dssp EEEEEECCBTTTBSSSCSGGGHHHHHHHHHT----TEEEEEECSSCHHHHHHHHHHHTCC----SCEEETTTTEEEECTT
T ss_pred CEEEEEECCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHHHHHHHHHCCC----CCCCCCCCCEEECCCC
T ss_conf 3799992777778999888999999999988----9999999198889999999983644----2100147848970898
Q ss_pred CCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC-------CC-CCC--CCCCCCCEEEEEECCCCC
Q ss_conf 88899842242101100234462349999998621013322235665-------34-553--224686268999329999
Q 001541 853 NSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEK-------VL-TPA--EQLSTNYCYAFSVQKPGM 922 (1057)
Q Consensus 853 ~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~-------~~-~~~--~~~~~~~~~s~~~~~~~~ 922 (1057)
.......................+.+...+................. .. ... ......+....... .
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 150 (243)
T d1wzca1 74 YFPFDVKGKEVGNYIVIELGIRVEKIREELKKLENIYGLKYYGNSTKEEIEKFTGMPPELVPLAMEREYSETIFEW--S- 150 (243)
T ss_dssp CCC----------CEEEECSCCHHHHHHHHHHHHHHHTCBCGGGSCHHHHHHHHCCCGGGHHHHTCCSSEEEECBC--S-
T ss_pred CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHH--H-
T ss_conf 4303543067788999987521999999997655311210031344888877624764677888863134113444--4-
Q ss_pred CCCHHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHH-CCCCCCEEEEECCCCCCCCCCCCCCCCEEE
Q ss_conf 9308999999987359089999608915997129999999999999994-998454899956888877011026766089
Q 001541 923 TPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRW-GVELSKMVVFVGESGDTDYEGLLGGVHKTV 1001 (1057)
Q Consensus 923 ~~~~~el~~~L~~~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~-gi~~~~~vaf~GD~~d~D~ieML~~ag~gV 1001 (1057)
.....+. ..... + ..+.+. .++++|.++||+.|++++++++ +++.+++++ +||+.| | ++||+.+++||
T Consensus 151 ~~~~~~~---~~~~~--~--~~~~~~-~~~~~~~~~~K~~al~~l~~~~~~~~~~~~~a-~GD~~N-D-~~Ml~~a~~~v 219 (243)
T d1wzca1 151 RDGWEEV---LVEGG--F--KVTMGS-RFYTVHGNSDKGKAAKILLDFYKRLGQIESYA-VGDSYN-D-FPMFEVVDKVF 219 (243)
T ss_dssp SSCHHHH---HHHTT--C--EEEECS-SSEEEECSCCHHHHHHHHHHHHHTTSCEEEEE-EECSGG-G-HHHHTTSSEEE
T ss_pred HHHHHHH---HHHCC--E--EEEECC-CCCCHHHHHCCHHHHHHHHHHHCCCCCCCEEE-ECCCHH-H-HHHHHCCCCEE
T ss_conf 6789986---55237--6--884236-53001031100779999999835999141999-849885-8-99998499389
Q ss_pred EECCCC
Q ss_conf 937976
Q 001541 1002 ILKGIC 1007 (1057)
Q Consensus 1002 aMgNa~ 1007 (1057)
|||||.
T Consensus 220 a~~Na~ 225 (243)
T d1wzca1 220 IVGSLK 225 (243)
T ss_dssp EESSCC
T ss_pred EECCCC
T ss_conf 927998
|
| >d1xvia_ c.108.1.10 (A:) Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Putative mannosyl-3-phosphoglycerate phosphatase MPGP (YedP) species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=2.9e-25 Score=180.72 Aligned_cols=216 Identities=13% Similarity=0.037 Sum_probs=125.7
Q ss_pred CCEEEEEEECCCC---CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEE
Q ss_conf 6659999831799---9740399999999998440389838999789998889999993899999998699679957982
Q 001541 773 RKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 773 ~kkliv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~ 849 (1057)
.+.|||+|+|||| ...+++.++++|++++++ |+.|++||||++.++.+++..+++. ..++||+||+.|+.
T Consensus 3 ~~~li~~DlDGTLl~~~~~i~~~~~~al~~l~~~----Gi~~~i~TGR~~~~~~~~~~~~~~~---~~~~i~~nGa~i~~ 75 (232)
T d1xvia_ 3 QPLLVFSDLDGTLLDSHSYDWQPAAPWLTRLREA----NVPVILCSSKTSAEMLYLQKTLGLQ---GLPLIAENGAVIQL 75 (232)
T ss_dssp CCEEEEEECTTTTSCSSCCSCCTTHHHHHHHHHT----TCCEEEECSSCHHHHHHHHHHTTCT---TSCEEEGGGTEEEC
T ss_pred CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCHHHCHHHHHHHCCC---CCEEECCCCEEEEE
T ss_conf 9879999788875289694799999999999977----9989999689736530688873457---84597169769993
Q ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCC--CC---CCCC---CCCCCCCCCCEEEEEECCCC
Q ss_conf 4578889984224210110023446234999999862101332223--56---6534---55322468626899932999
Q 001541 850 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAE--SG---EKVL---TPAEQLSTNYCYAFSVQKPG 921 (1057)
Q Consensus 850 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~--~~---~~~~---~~~~~~~~~~~~s~~~~~~~ 921 (1057)
............... .....+...................... .. .... .........+....... .
T Consensus 76 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 150 (232)
T d1xvia_ 76 AEQWQEIDGFPRIIS---GISHGEISLVLNTLREKEHFKFTTFDDVDDATIAEWTGLSRSQAALTQLHEASVTLIWR--D 150 (232)
T ss_dssp CTTCTTSTTTTEEEC---SSCHHHHHHHHHHHHHHHCCCEEEGGGSCHHHHHHHHCCCHHHHHHHHCCSSCEEEEEC--S
T ss_pred CCCCCCCCHHHHHHH---HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCEEEEECCC--C
T ss_conf 577531201455555---77899998765422222021212332023555433310230134554411124531022--5
Q ss_pred CCCCHHHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHH---HCCCCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 9930899999998735908999960891599712999999999999999---4998454899956888877011026766
Q 001541 922 MTPPVKELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLR---WGVELSKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 922 ~~~~~~el~~~L~~~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~---~gi~~~~~vaf~GD~~d~D~ieML~~ag 998 (1057)
.......+........ .. ..... ..++++|.+++|+.|+++|++. +|++.+++++ +||+.| | ++||+.++
T Consensus 151 ~~~~~~~~~~~~~~~~--~~-~~~~~-~~~~~~~~~~~K~~~~~~l~~~~~~l~i~~~~~ia-fGD~~N-D-l~Ml~~a~ 223 (232)
T d1xvia_ 151 SDERMAQFTARLNELG--LQ-FMQGA-RFWHVLDASAGKDQAANWIIATYQQLSGKRPTTLG-LGDGPN-D-APLLEVMD 223 (232)
T ss_dssp CHHHHHHHHHHHHHTT--EE-EEECS-SCEEEEETTCCHHHHHHHHHHHHHHHHSSCCEEEE-EESSGG-G-HHHHHTSS
T ss_pred CHHHHHHHHHHHHHCC--CE-EEECC-CEEECCCCCCHHHHHHHHHHHHHHHCCCCHHCEEE-ECCCHH-H-HHHHHHCC
T ss_conf 2999988998765305--50-33225-30221478851789999999999975989521999-849786-8-99998199
Q ss_pred EEEEECCCC
Q ss_conf 089937976
Q 001541 999 KTVILKGIC 1007 (1057)
Q Consensus 999 ~gVaMgNa~ 1007 (1057)
+||||+||.
T Consensus 224 ~~vaV~n~~ 232 (232)
T d1xvia_ 224 YAVIVKGLN 232 (232)
T ss_dssp EEEECCCCC
T ss_pred EEEEEECCC
T ss_conf 089971899
|
| >d1u02a_ c.108.1.15 (A:) Trehalose-6-phosphate phosphatase related protein {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Trehalose-phosphatase domain: Trehalose-6-phosphate phosphatase related protein species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.90 E-value=5.7e-24 Score=172.19 Aligned_cols=186 Identities=14% Similarity=0.105 Sum_probs=112.0
Q ss_pred EEEEEECCCCC--------CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEE
Q ss_conf 99998317999--------7403999999999984403898389997899988899999938999999986996799579
Q 001541 776 IFVISVDCDST--------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDL 847 (1057)
Q Consensus 776 liv~DiDGTL~--------~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I 847 (1057)
|||||+||||. +.+++.++++|+++++. + .|+|+|||++..+.... +. +++++|+||+.+
T Consensus 2 Li~~DlDGTL~~~~~~~~~~~i~~~~~~~l~~l~~~----~-~v~i~TGR~~~~l~~~~---~~----~~~~~~~ng~~~ 69 (229)
T d1u02a_ 2 LIFLDYDGTLVPIIMNPEESYADAGLLSLISDLKER----F-DTYIVTGRSPEEISRFL---PL----DINMICYHGACS 69 (229)
T ss_dssp EEEEECBTTTBCCCSCGGGCCCCHHHHHHHHHHHHH----S-EEEEECSSCHHHHHHHS---CS----SCEEEEGGGTEE
T ss_pred EEEEEECCCCCCCCCCHHHCCCCHHHHHHHHHHHHC----C-CEEEECCCCHHHHHHHC---CC----CCCEEECCEEEE
T ss_conf 899995577789978965488999999999998509----9-78999699879966434---76----662896470898
Q ss_pred EECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCH-
Q ss_conf 8245788899842242101100234462349999998621013322235665345532246862689993299999308-
Q 001541 848 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPV- 926 (1057)
Q Consensus 848 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~- 926 (1057)
+..+.. .+.. ......+.++.....+........ . ...........+++.... ....
T Consensus 70 ~~~~~~----------~~~~--~~~~~~~~~~~i~~~~~~~~~~~~-----~----~~~~~~~~~~~~~~~~~~-~~~~~ 127 (229)
T d1u02a_ 70 KINGQI----------VYNN--GSDRFLGVFDRIYEDTRSWVSDFP-----G----LRIYRKNLAVLYHLGLMG-ADMKP 127 (229)
T ss_dssp EETTEE----------EECT--TGGGGHHHHHHHHHHHTTHHHHST-----T----CEEEEETTEEEEECTTSC-STTHH
T ss_pred ECCCCE----------EEEC--CHHHHHHHHHHHHHHHHHHHCCCC-----C----CEECCCCCCEEEEEHHHH-HHHHH
T ss_conf 349934----------6623--305449999999998677650667-----7----210355421342203332-44579
Q ss_pred ---HHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf ---99999998735908999960891599712999999999999999499845489995688887701102676608993
Q 001541 927 ---KELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 927 ---~el~~~L~~~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaM 1003 (1057)
+.+...+..... .+.+.. .++||+|+|+|||.||++|+.+ +++++ +||+.| | ++||+.++.|++|
T Consensus 128 ~~~~~l~~~~~~~~~---~~~~~~-~~idi~p~g~~Kg~al~~l~~~-----~~~i~-~GDs~N-D-~~Mf~~~~~~~av 195 (229)
T d1u02a_ 128 KLRSRIEEIARIFGV---ETYYGK-MIIELRVPGVNKGSAIRSVRGE-----RPAII-AGDDAT-D-EAAFEANDDALTI 195 (229)
T ss_dssp HHHHHHHHHHHHHTC---EEEECS-SEEEEECTTCCHHHHHHHHHTT-----SCEEE-EESSHH-H-HHHHHTTTTSEEE
T ss_pred HHHHHHHHHHHCCCE---EEEEEC-EEEEEECCCCCHHHHHHHHHCC-----CCCEE-ECCCCC-H-HHHHHCCCCEEEE
T ss_conf 999999998523876---999602-1899736989889999997440-----44566-438887-0-9999602882899
Q ss_pred CCCC
Q ss_conf 7976
Q 001541 1004 KGIC 1007 (1057)
Q Consensus 1004 gNa~ 1007 (1057)
+|+.
T Consensus 196 ~~g~ 199 (229)
T d1u02a_ 196 KVGE 199 (229)
T ss_dssp EESS
T ss_pred EECC
T ss_conf 9689
|
| >d2f9fa1 c.87.1.8 (A:2-167) First mannosyl transferase WbaZ {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: First mannosyl transferase WbaZ species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=99.88 E-value=9.1e-22 Score=157.69 Aligned_cols=157 Identities=24% Similarity=0.300 Sum_probs=125.8
Q ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCC
Q ss_conf 99859999848999789999999997640135998499999508997510010189999999999871999977839999
Q 001541 473 PRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHH 552 (1057)
Q Consensus 473 ~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~f~g~v 552 (1057)
.....++++||+.+.||++.+++|+.+++. ..+ +++|.+.+.+. ...+.+.+.... .++|.|+|++
T Consensus 10 ~~~~~~l~iGrl~~~K~~~~~i~a~~~l~~----~~l-~ivg~~~~~~~--------~~~~~~~~~~~~-~~~v~~~g~~ 75 (166)
T d2f9fa1 10 CYGDFWLSVNRIYPEKRIELQLEVFKKLQD----EKL-YIVGWFSKGDH--------AERYARKIMKIA-PDNVKFLGSV 75 (166)
T ss_dssp CCCSCEEEECCSSGGGTHHHHHHHHHHCTT----SCE-EEEBCCCTTST--------HHHHHHHHHHHS-CTTEEEEESC
T ss_pred CCCCEEEEEECCCCCCCHHHHHHHHHHHCC----CEE-EEEEECCCCCC--------HHHHHHHHCCCC-CCCEEEEECC
T ss_conf 999999999237543499999999998339----749-99972244542--------233332202356-6758874212
Q ss_pred CCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHH
Q ss_conf 97829999997014993999729989987899999983996998388881013303984699199999999999999971
Q 001541 553 KQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPVDIHRVLDNGLLVDPHDQQSVADALLKLVA 632 (1057)
Q Consensus 553 ~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~~~~Gllv~p~d~e~la~aI~~ll~ 632 (1057)
+.+++..+|+.| |++|+||..|+||++++|||++|+|||+++.++..|++.++.+|+++++ |+++++++|.++++
T Consensus 76 ~~~~~~~~~~~a----d~~i~ps~~e~~~~~~~Ea~~~g~pvi~s~~~~~~e~i~~~~~g~~~~~-d~~~~~~~i~~l~~ 150 (166)
T d2f9fa1 76 SEEELIDLYSRC----KGLLCTAKDEDFGLTPIEAMASGKPVIAVNEGGFKETVINEKTGYLVNA-DVNEIIDAMKKVSK 150 (166)
T ss_dssp CHHHHHHHHHHC----SEEEECCSSCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBTTTEEEECS-CHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHH
T ss_conf 211122222222----2233212211233221101122332205527864033048841246899-99999999999980
Q ss_pred CHHHHHHHHHHHHHHHHCC
Q ss_conf 9999999999998994409
Q 001541 633 DKQLWARCRQNGLKNIHLF 651 (1057)
Q Consensus 633 d~~~~~~~~~~a~~~v~~f 651 (1057)
+++. +++++++.+++|
T Consensus 151 ~~~~---~~~~~~~~a~~f 166 (166)
T d2f9fa1 151 NPDK---FKKDCFRRAKEF 166 (166)
T ss_dssp CTTT---THHHHHHHHHTC
T ss_pred CHHH---HHHHHHHHHHCC
T ss_conf 9999---999999998579
|
| >d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=7.8e-22 Score=158.13 Aligned_cols=208 Identities=12% Similarity=0.022 Sum_probs=110.6
Q ss_pred EEEE-EEECCCC---CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH-HHCCCCCCCCCEEEECCCCEEEE
Q ss_conf 5999-9831799---97403999999999984403898389997899988899999-93899999998699679957982
Q 001541 775 HIFV-ISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFL-VSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 775 kliv-~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l-~~l~l~~~~~D~lI~~nGa~I~~ 849 (1057)
|+|+ ||+|||| .+.+++.++++|++++++ |+.| ++|||....+...+ ..+++. ..+.+++|++|+.++.
T Consensus 1 k~i~lFDlDGTLl~~~~~is~~~~~~i~~l~~~----g~~~-i~tgrr~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~ 74 (244)
T d2fuea1 1 RVLCLFDVDGTLTPARQKIDPEVAAFLQKLRSR----VQIG-VVGGSDYCKIAEQLGDGDEVI-EKFDYVFAENGTVQYK 74 (244)
T ss_dssp CEEEEEESBTTTBSTTSCCCHHHHHHHHHHTTT----SEEE-EECSSCHHHHHHHHSSTTTHH-HHCSEEEEGGGTEEEE
T ss_pred CEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEE-EEECCCHHHHHHHHHHHHCCC-CCCCEEECCCCEEECC
T ss_conf 979998445683499895899999999999868----9999-996698065134566542334-5542231144002303
Q ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCC-----
Q ss_conf 457888998422421011002344623499999986210133222356653455322468626899932999993-----
Q 001541 850 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTP----- 924 (1057)
Q Consensus 850 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~----- 924 (1057)
.+.. .....+............................ ........ .....+.........
T Consensus 75 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 140 (244)
T d2fuea1 75 HGRL------LSKQTIQNHLGEELLQDLINFCLSYMALLRLPKK-------RGTFIEFR-NGMLNISPIGRSCTLEERIE 140 (244)
T ss_dssp TTEE------CCCCCHHHHHCHHHHHHHHHHHHHHHHTCCCSCC-------CSCSEEEC-SSCEEECSSCTTCCHHHHHH
T ss_pred CCCC------CEEECHHHHHHHHHHHHHHHHHHHHHHEECCCCC-------CCCHHHHH-HHHHHCCCCCCCCCHHHHHH
T ss_conf 7851------2120135777666777777642333101102211-------24212344-44420232233320345456
Q ss_pred ---------CHHHHHHHHHH-H-CCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC---CCCCCC
Q ss_conf ---------08999999987-3-590899996089159971299999999999999949984548999568---888770
Q 001541 925 ---------PVKELRKVLRI-Q-ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE---SGDTDY 990 (1057)
Q Consensus 925 ---------~~~el~~~L~~-~-~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD---~~d~D~ 990 (1057)
...+....+.. . .....+..+.. .++||+|+++|||.||++|++ ++++++++|||+ ++| |
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~lei~~~~vsKg~al~~L~~---~~~~ev~afGD~~~~G~N-D- 214 (244)
T d2fuea1 141 FSELDKKEKIREKFVEALKTEFAGKGLRFSRGGM-ISFDVFPEGWDKRYCLDSLDQ---DSFDTIHFFGNETSPGGN-D- 214 (244)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTTSCEEEECCSS-SCEEEEETTCSTTHHHHHHTT---SCCSEEEEEESCCSTTST-T-
T ss_pred HHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCC-CCCEECCHHCCHHHHHHHHHC---CCHHHEEEECCCCCCCCC-C-
T ss_conf 6653001036788899999885103426764167-600320322027899999966---984459998688999997-2-
Q ss_pred CCCCCCCC-EEEEECCCCH
Q ss_conf 11026766-0899379761
Q 001541 991 EGLLGGVH-KTVILKGICS 1008 (1057)
Q Consensus 991 ieML~~ag-~gVaMgNa~~ 1008 (1057)
++||+.++ .|+||+||.+
T Consensus 215 ~eml~~a~~~~~av~na~~ 233 (244)
T d2fuea1 215 FEIFADPRTVGHSVVSPQD 233 (244)
T ss_dssp HHHHHSTTSEEEECSSHHH
T ss_pred HHHHHCCCCCEEECCCHHH
T ss_conf 9999717985899189899
|
| >d2amya1 c.108.1.10 (A:4-246) Phosphomannomutase 2 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Predicted hydrolases Cof domain: Phosphomannomutase 2 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.1e-20 Score=150.66 Aligned_cols=208 Identities=10% Similarity=0.043 Sum_probs=114.6
Q ss_pred CCEEEEEEECCCC---CCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCEEEECCCCEEEE
Q ss_conf 6659999831799---9740399999999998440389838999789998889999993899999998699679957982
Q 001541 773 RKHIFVISVDCDS---TTGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLSPSDFDAFICNSGSDLYY 849 (1057)
Q Consensus 773 ~kkliv~DiDGTL---~~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~I~~ 849 (1057)
..||++||+|||| .+.+++.++++|++++++ |+ ++++|||++..+...+...... .+.++++++|+.++.
T Consensus 2 ~~kl~~fDlDGTLl~~~~~i~~~~~~al~~l~~~----g~-~~i~Tgr~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 74 (243)
T d2amya1 2 GPALCLFDVDGTLTAPRQKITKEMDDFLQKLRQK----IK-IGVVGGSDFEKVQEQLGNDVVE--KYDYVFPENGLVAYK 74 (243)
T ss_dssp CSEEEEEESBTTTBCTTSCCCHHHHHHHHHHTTT----SE-EEEECSSCHHHHHHHHCTTHHH--HCSEEESGGGTEEEE
T ss_pred CCEEEEECCCCCEECCCCCCCHHHHHHHHHHHCC----CC-EEEECCCCHHHHHHHHHHHCCC--CCEEEECCCEEEEEC
T ss_conf 9879998674782089994899999999999809----98-9999589868867887652165--642995274799933
Q ss_pred CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCC------
Q ss_conf 45788899842242101100234462349999998621013322235665345532246862689993299999------
Q 001541 850 STLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMT------ 923 (1057)
Q Consensus 850 ~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~------ 923 (1057)
.+. ..+...+......+.................. ................+........
T Consensus 75 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (243)
T d2amya1 75 DGK----------LLCRQNIQSHLGEALIQDLINYCLSYIAKIKL----PKKRGTFIEFRNGMLNVSPIGRSCSQEERIE 140 (243)
T ss_dssp TTE----------EEEECCHHHHHCHHHHHHHHHHHHHHHHHCCC----SCCCSCSEEEETTEEEECSSCTTCCHHHHHH
T ss_pred CCC----------CCEECCHHHHHHHHHHHHHHHHHHHHHEECCC----CCCCCCHHHHHHHHHCCCCCCCCCCHHHHHH
T ss_conf 885----------11100012888888988887640001000145----3122202231011211222222354233012
Q ss_pred --------CCHHHHHHHHHHH--CCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECC---CCCCCC
Q ss_conf --------3089999999873--590899996089159971299999999999999949984548999568---888770
Q 001541 924 --------PPVKELRKVLRIQ--ALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGE---SGDTDY 990 (1057)
Q Consensus 924 --------~~~~el~~~L~~~--~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD---~~d~D~ 990 (1057)
....+....+... ...+.+..+... ++||+|+++|||.||++|+ +++.+++++|||+ ++| |
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~lei~~~~vsKg~al~~l~---~~~~~ev~afGD~~~~g~N-D- 214 (243)
T d2amya1 141 FYELDKKENIRQKFVADLRKEFAGKGLTFSIGGQI-SFDVFPDGWDKRYCLRHVE---NDGYKTIYFFGDKTMPGGN-D- 214 (243)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTTSCEEEEEETTT-EEEEEETTCSGGGGGGGTT---TSCCSEEEEEECSCC---C-C-
T ss_pred HHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCC-CCEEECCCCCHHHHHHHHH---CCCCCEEEEECCCCCCCCC-C-
T ss_conf 32110010335899999998713455279952896-4155132167899999984---8993629998689999997-6-
Q ss_pred CCCCCCCC-EEEEECCCC
Q ss_conf 11026766-089937976
Q 001541 991 EGLLGGVH-KTVILKGIC 1007 (1057)
Q Consensus 991 ieML~~ag-~gVaMgNa~ 1007 (1057)
++||+.++ .+++|+|+.
T Consensus 215 i~Ml~~~g~~~~~v~~~~ 232 (243)
T d2amya1 215 HEIFTDPRTMGYSVTAPE 232 (243)
T ss_dssp CHHHHCTTEEEEECSSHH
T ss_pred HHHHHCCCCCEEEECCHH
T ss_conf 999971597299907999
|
| >d1pn3a_ c.87.1.5 (A:) TDP-epi-vancosaminyltransferase GtfA {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-epi-vancosaminyltransferase GtfA species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.57 E-value=1.8e-12 Score=96.48 Aligned_cols=373 Identities=12% Similarity=0.064 Sum_probs=170.8
Q ss_pred EEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 19999821344445786889999888277999999999823999036999833878998897569863225899998634
Q 001541 166 LYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFM 245 (1057)
Q Consensus 166 l~Illis~~~~~~~~~~~~g~~~d~GG~~~yv~~LA~aLa~~G~v~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~ 245 (1057)
|||++.+ .| ++|...=.+.||++|+++| |+|+++|.......
T Consensus 1 mril~~~-~g--------------t~Ghi~P~laLA~~L~~rG--h~V~~~~~~~~~~~--------------------- 42 (391)
T d1pn3a_ 1 MRVLITG-CG--------------SRGDTEPLVALAARLRELG--ADARMCLPPDYVER--------------------- 42 (391)
T ss_dssp CEEEEEE-ES--------------SHHHHHHHHHHHHHHHHTT--CEEEEEECGGGHHH---------------------
T ss_pred CEEEEEC-CC--------------CHHHHHHHHHHHHHHHHCC--CEEEEEECHHHHHH---------------------
T ss_conf 9799985-88--------------7368999999999999889--98999978036768---------------------
Q ss_pred CCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CCHHHHHH
Q ss_conf 4468889929998269996545332-357987367898899999998789886635999996509998599-81489999
Q 001541 246 DDMGESSGAYIIRIPFGPKDKYIAK-ELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAAL 323 (1057)
Q Consensus 246 ~~~~~~~gv~iirip~~~~~~~l~k-~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDIIh~h~~-~~~~~a~~ 323 (1057)
-+..|+.++.++..+. ..... .......... +...+..+...+.+.+ ..||+|...+. .....+..
T Consensus 43 ---v~~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~-----~~~D~vi~~~~~~~~~~~~~ 110 (391)
T d1pn3a_ 43 ---CAEVGVPMVPVGRAVR-AGAREPGELPPGAAEV---VTEVVAEWFDKVPAAI-----EGCDAVVTTGLLPAAVAVRS 110 (391)
T ss_dssp ---HHHHTCCEEECSSCSS-GGGSCTTCCCTTCGGG---HHHHHHHHHHHHHHHH-----TTCSEEEEEECHHHHHHHHH
T ss_pred ---HHHCCCEEEECCCCHH-HHHHCHHHHHHHHHHH---HHHHHHHHHHHHHHHH-----CCCCEEEECCCCCHHHHHHH
T ss_conf ---9877984898783687-7734856666999999---9999999999999973-----07984787344713789999
Q ss_pred HHHCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCHHH
Q ss_conf 98039997999925883204799999511026778778789898999998750379999469789999995407998478
Q 001541 324 LSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVL 403 (1057)
Q Consensus 324 l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~ 403 (1057)
++..+++|++...+....-.............. ..+....... ... ............. .....
T Consensus 111 ~a~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~-~~~~~~~~~~~~~--~~~~~--------- 174 (391)
T d1pn3a_ 111 MAEKLGIPYRYTVLSPDHLPSEQSQAERDMYNQ---GADRLFGDAV-NSH-RASIGLPPVEHLY--DYGYT--------- 174 (391)
T ss_dssp HHHHHTCCEEEEESSGGGSGGGSCHHHHHHHHH---HHHHHTHHHH-HHH-HHTTSCCCCCCHH--HHHHC---------
T ss_pred HHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHH---HHHHHHHHHH-HHH-HHHHCCCCCCCCC--CCCCC---------
T ss_conf 999808764885312244553122200567889---9988877889-999-9874376632000--24566---------
Q ss_pred HHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEC
Q ss_conf 99999968203344588999699949998789867899999997788999999999822799876417999859999848
Q 001541 404 ERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALAR 483 (1057)
Q Consensus 404 ~~~l~~~~~~gv~~~g~~~~kv~VIpnGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGR 483 (1057)
....+..........+..... ......... ...+.......+.......+++..+.
T Consensus 175 --------------------~~~~l~~~~~~~~~~~~~~~~-~~~g~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~ 230 (391)
T d1pn3a_ 175 --------------------DQPWLAADPVLSPLRPTDLGT-VQTGAWILP---DERPLSAELEAFLAAGSTPVYVGFGS 230 (391)
T ss_dssp --------------------SSCEECSCTTTSCCCTTCCSC-CBCCCCCCC---CCCCCCHHHHHHTTSSSCCEEEECTT
T ss_pred --------------------CCEEECCCHHHHCCCCCCCCE-EEECCCCCC---CCCCCCHHHHHHHCCCCCEEEEECCC
T ss_conf --------------------640231542431157777771-565686567---65567788864211589727872243
Q ss_pred CCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHH
Q ss_conf 99978999999999764013599849999950899751001018999999999987199997783999997829999997
Q 001541 484 PDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRL 563 (1057)
Q Consensus 484 l~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~f~g~v~~~ei~~ly~~ 563 (1057)
. ...+...+.+.+........ ..+ ++........ .....+++.+.+++++ ..++..
T Consensus 231 ~-~~~~~~~~~~~~~~~l~~~~-~~~-~~~~~~~~~~------------------~~~~~~~v~i~~~~p~---~~ll~~ 286 (391)
T d1pn3a_ 231 S-SRPATADAAKMAIKAVRASG-RRI-VLSRGWADLV------------------LPDDGADCFVVGEVNL---QELFGR 286 (391)
T ss_dssp C-CSTHHHHHHHHHHHHHHHTT-CCE-EEECTTTTCC------------------CSSCCTTCCEESSCCH---HHHHTT
T ss_pred C-CCCCHHHHHHHHHHHHHHCC-CEE-EEECCCCCCC------------------CCCCCCCEEEECCCCH---HHHHHH
T ss_conf 1-22327899999999998569-779-9943643334------------------4568898899544687---999842
Q ss_pred HHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC--------HHHHHCCCCEEEECCCC--HHHHHHHHHHHHHC
Q ss_conf 014993999729989987899999983996998388881--------01330398469919999--99999999999719
Q 001541 564 AAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP--------VDIHRVLDNGLLVDPHD--QQSVADALLKLVAD 633 (1057)
Q Consensus 564 Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg~--------~eii~~~~~Gllv~p~d--~e~la~aI~~ll~d 633 (1057)
+ |+||..+ -..++.||+++|+|+|+....+- .+.+...+.|+.+++.+ .++++++|.+++++
T Consensus 287 a----~~~v~hg----G~~t~~Eal~~G~P~v~~P~~~d~~~eQ~~nA~~l~~~G~g~~l~~~~~~~~~l~~~i~~~l~~ 358 (391)
T d1pn3a_ 287 V----AAAIHHD----SAGTTLLAMRAGIPQIVVRRVVDNVVEQAYHADRVAELGVGVAVDGPVPTIDSLSAALDTALAP 358 (391)
T ss_dssp S----SCEEEES----CHHHHHHHHHHTCCEEEECSSCCBTTBCCHHHHHHHHHTSEEEECCSSCCHHHHHHHHHHHTST
T ss_pred C----CEEEECC----CHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHHCH
T ss_conf 5----4898527----4379999998288689933556774529999999998798897685789999999999998399
Q ss_pred HHHHHHHHHHHHHHH---HCCCHHHHHHHHHHHHH
Q ss_conf 999999999998994---40998999999999998
Q 001541 634 KQLWARCRQNGLKNI---HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 634 ~~~~~~~~~~a~~~v---~~fsw~~~a~~~l~~l~ 665 (1057)
+.+ +++++.. +.-.....++.+.+.+.
T Consensus 359 -~~r----~~a~~~a~~~~~~g~~~aa~~i~~~l~ 388 (391)
T d1pn3a_ 359 -EIR----ARATTVADTIRADGTTVAAQLLFDAVS 388 (391)
T ss_dssp -THH----HHHHHHGGGSCSCHHHHHHHHHHHHHH
T ss_pred -HHH----HHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_conf -999----999999999885279999999999987
|
| >d1rrva_ c.87.1.5 (A:) TDP-vancosaminyltransferase GftD {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: TDP-vancosaminyltransferase GftD species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.53 E-value=7.1e-12 Score=92.52 Aligned_cols=85 Identities=16% Similarity=0.093 Sum_probs=66.3
Q ss_pred CCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CHHHHHCCCCEEEEC
Q ss_conf 9999778399999782999999701499399972998998789999998399699838888----101330398469919
Q 001541 541 DLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVD 616 (1057)
Q Consensus 541 ~l~~~V~f~g~v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg----~~eii~~~~~Gllv~ 616 (1057)
.+.++|.+.+++|+ .+++..+ ++||. .|...++.||+++|+|+|+....+ ....++..+.|+.++
T Consensus 283 ~~~~~v~~~~~~p~---~~ll~~~----~~~I~----hgG~~t~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~G~g~~l~ 351 (401)
T d1rrva_ 283 DDRDDCFAIDEVNF---QALFRRV----AAVIH----HGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAALGIGVAHD 351 (401)
T ss_dssp CCCTTEEEESSCCH---HHHGGGS----SEEEE----CCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHHHTSEEECS
T ss_pred CCCCCEEEEECCCC---HHHHHHC----CEEEE----CCCCHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHCCCEEECC
T ss_conf 57898899731481---7776212----48886----1772489999983999898066120899999999879889757
Q ss_pred CCC--HHHHHHHHHHHHHCHHHH
Q ss_conf 999--999999999997199999
Q 001541 617 PHD--QQSVADALLKLVADKQLW 637 (1057)
Q Consensus 617 p~d--~e~la~aI~~ll~d~~~~ 637 (1057)
..+ ++.++++|.++++ ++.+
T Consensus 352 ~~~~~~~~L~~ai~~vl~-~~~r 373 (401)
T d1rrva_ 352 GPTPTFESLSAALTTVLA-PETR 373 (401)
T ss_dssp SSCCCHHHHHHHHHHHTS-HHHH
T ss_pred CCCCCHHHHHHHHHHHHC-HHHH
T ss_conf 478999999999999849-7999
|
| >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Peptidoglycan biosynthesis glycosyltransferase MurG domain: Peptidoglycan biosynthesis glycosyltransferase MurG species: Escherichia coli [TaxId: 562]
Probab=99.48 E-value=2.6e-10 Score=82.27 Aligned_cols=330 Identities=12% Similarity=0.044 Sum_probs=179.2
Q ss_pred CCCHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
Q ss_conf 88277999999999823999036999833878998897569863225899998634446888992999826999654533
Q 001541 190 TGGQVKYVVELARALGSMPGVYRVDLLTRQVSAPDVDWSYGEPTEMLTPRNSDDFMDDMGESSGAYIIRIPFGPKDKYIA 269 (1057)
Q Consensus 190 ~GG~~~yv~~LA~aLa~~G~v~~V~vit~~~~~~~~~~~y~~~~e~l~~~~~~~~~~~~~~~~gv~iirip~~~~~~~l~ 269 (1057)
|||+......|+++|.++| |+|.+++.... . ..+ .....|..+..++.........
T Consensus 10 tGGHv~~a~al~~~L~~~G--~eV~~i~~~~~---~------~~~-------------~~~~~~~~~~~~~~~~~~~~~~ 65 (351)
T d1f0ka_ 10 TGGHVFPGLAVAHHLMAQG--WQVRWLGTADR---M------EAD-------------LVPKHGIEIDFIRISGLRGKGI 65 (351)
T ss_dssp SHHHHHHHHHHHHHHHTTT--CEEEEEECTTS---T------HHH-------------HGGGGTCEEEECCCCCCTTCCH
T ss_pred CHHHHHHHHHHHHHHHHCC--CEEEEEEECCC---C------HHH-------------CCCCCCCCEEEEECCCCCCCCH
T ss_conf 5898999999999998589--98999995883---2------432-------------2350499579997888677777
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
Q ss_conf 23579873678988999999987898866359999965099985998148999998039997999925883204799999
Q 001541 270 KELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLK 349 (1057)
Q Consensus 270 k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDIIh~h~~~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~ 349 (1057)
...++ . .......+....+.+.+ .+||++.+........+...+..+++|.+...++.......
T Consensus 66 ~~~~~-~----~~~~~~~~~~~~~i~~~-------~~~~~~~~~~~~~~~~~~~~a~~~~ip~~~~~~~~~~~~~~---- 129 (351)
T d1f0ka_ 66 KALIA-A----PLRIFNAWRQARAIMKA-------YKPDVVLGMGGYVSGPGGLAAWSLGIPVVLHEQNGIAGLTN---- 129 (351)
T ss_dssp HHHHT-C----HHHHHHHHHHHHHHHHH-------HCCSEEEECSSTTHHHHHHHHHHTTCCEEEEECSSSCCHHH----
T ss_pred HHHHH-H----HHHHHHHHHHHHHHHHC-------CCCCEEEECCCCHHHHHHHHHHHCCCCEEECCCCCCCCHHH----
T ss_conf 99999-9----98877767777887631-------34430011032211344545540564346322212310467----
Q ss_pred HHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEC
Q ss_conf 51102677877878989899999875037999946978999999540799847899999968203344588999699949
Q 001541 350 QARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIP 429 (1057)
Q Consensus 350 ~g~~~~~~i~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~kv~VIp 429 (1057)
......++.+....... .. ....+.
T Consensus 130 ----------------------~~~~~~~~~~~~~~~~~--------~~-------------------------~~~~~~ 154 (351)
T d1f0ka_ 130 ----------------------KWLAKIATKVMQAFPGA--------FP-------------------------NAEVVG 154 (351)
T ss_dssp ----------------------HHHTTTCSEEEESSTTS--------SS-------------------------SCEECC
T ss_pred ----------------------HHHHHHCCEEECCCCCC--------CC-------------------------CEEEEC
T ss_conf ----------------------77654134011023566--------53-------------------------003876
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCH-HHHHHHHHHCCCCCCCCC
Q ss_conf 9987898678999999977889999999998227998764179998599998489997899-999999976401359984
Q 001541 430 PGMEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNI-TTLVKAFGECRPLRELAN 508 (1057)
Q Consensus 430 nGiD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi-~~Ll~A~~~l~~~~~~~~ 508 (1057)
+......+.. +. ...+.....+...++.+|.-.....+ ..+.+.+..+.. ..
T Consensus 155 ~~~~~~~~~~--------------------~~---~~~~~~~~~~~~~i~~~~gs~g~~~~~~~~~~~~~~l~~----~~ 207 (351)
T d1f0ka_ 155 NPVRTDVLAL--------------------PL---PQQRLAGREGPVRVLVVGGSQGARILNQTMPQVAAKLGD----SV 207 (351)
T ss_dssp CCCCHHHHTS--------------------CC---HHHHHTTCCSSEEEEEECTTTCCHHHHHHHHHHHHHHGG----GE
T ss_pred CCCCCCCCCC--------------------HH---HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC----CC
T ss_conf 7764310000--------------------05---776532035874313344540134668888876665245----53
Q ss_pred EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHH
Q ss_conf 99999508997510010189999999999871999977839999978299999970149939997299899878999999
Q 001541 509 LTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAA 588 (1057)
Q Consensus 509 l~LIvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~f~g~v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAm 588 (1057)
..++++..... ......... ....++...++ .+++.+++..| |++|.- +-+.++.|++
T Consensus 208 ~~i~~~~~~~~----------~~~~~~~~~--~~~~~~~v~~f--~~~~~~lm~~a----dl~It~----~G~~T~~Eal 265 (351)
T d1f0ka_ 208 TIWHQSGKGSQ----------QSVEQAYAE--AGQPQHKVTEF--IDDMAAAYAWA----DVVVCR----SGALTVSEIA 265 (351)
T ss_dssp EEEEECCTTCH----------HHHHHHHHH--TTCTTSEEESC--CSCHHHHHHHC----SEEEEC----CCHHHHHHHH
T ss_pred EEEEECCCCCH----------HHHHHHHCC--CCCCCCEEEEE--HHHHHHHHHHC----CHHHCC----CCCHHHHHHH
T ss_conf 04542134104----------443343202--33223155543--05589999747----422205----5423778888
Q ss_pred HCCCCEEECCCC---C----CHHHHHCCCCEEEECCCC--HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 839969983888---8----101330398469919999--9999999999971999999999999899440998999999
Q 001541 589 AHGLPIVATKNG---G----PVDIHRVLDNGLLVDPHD--QQSVADALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKT 659 (1057)
Q Consensus 589 A~G~PVIat~~G---g----~~eii~~~~~Gllv~p~d--~e~la~aI~~ll~d~~~~~~~~~~a~~~v~~fsw~~~a~~ 659 (1057)
++|+|+|..... + ..+.++..+.|+.++..+ .+.+.++|..+ +++...+|++++++......++..++.
T Consensus 266 ~~g~P~I~iP~~~~~~~Q~~NA~~l~~~G~~~~~~~~~~~~e~l~~~l~~l--~~~~~~~~~~~~~~~~~~~~a~~i~~~ 343 (351)
T d1f0ka_ 266 AAGLPALFVPFQHKDRQQYWNALPLEKAGAAKIIEQPQLSVDAVANTLAGW--SRETLLTMAERARAASIPDATERVANE 343 (351)
T ss_dssp HHTCCEEECCCCCTTCHHHHHHHHHHHTTSEEECCGGGCCHHHHHHHHHTC--CHHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEECHHHCCHHHHHHHHHHH--CHHHHHHHHHHHHCCCCCCHHHHHHHH
T ss_conf 717854654154677669999999998899899223319999999999863--999999999998726995699999999
Q ss_pred HHHHHH
Q ss_conf 999998
Q 001541 660 YLSRIA 665 (1057)
Q Consensus 660 ~l~~l~ 665 (1057)
.+++.+
T Consensus 344 i~~l~~ 349 (351)
T d1f0ka_ 344 VSRVAR 349 (351)
T ss_dssp HHHHHT
T ss_pred HHHHHH
T ss_conf 999984
|
| >d1rkua_ c.108.1.11 (A:) Homoserine kinase ThrH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Homoserine kinase ThrH domain: Homoserine kinase ThrH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.45 E-value=1.5e-15 Score=116.66 Aligned_cols=78 Identities=12% Similarity=0.139 Sum_probs=60.7
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 97129999999999999994998454899956888877011026766089937976113433100299999987768999
Q 001541 952 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSP 1031 (1057)
Q Consensus 952 dViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~~~ 1031 (1057)
...+...+|+.+.+.++.+++++++++++ +||+.| | ++||+.||.|||| |+. .+.+..+.+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~i~~~evia-iGDg~N-D-i~Ml~~Ag~gIAm-na~--~~v~~~~~~------------- 182 (206)
T d1rkua_ 122 RVVGYQLRQKDPKRQSVIAFKSLYYRVIA-AGDSYN-D-TTMLSEAHAGILF-HAP--ENVIREFPQ------------- 182 (206)
T ss_dssp CEEEEECCSSSHHHHHHHHHHHTTCEEEE-EECSST-T-HHHHHHSSEEEEE-SCC--HHHHHHCTT-------------
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCCCEEE-ECCCCC-C-HHHHHHCCCCEEE-CCC--HHHHHHCCC-------------
T ss_conf 45432112014578899986425652188-438732-7-9999858940997-897--799986789-------------
Q ss_pred CEEECCCCCCHHHHHHHHHHH
Q ss_conf 738815777858999999970
Q 001541 1032 NIVQTPEDCTTSDIRSSLEQL 1052 (1057)
Q Consensus 1032 ~~~~vt~~~~~dgI~~aL~~~ 1052 (1057)
|+ ...+.+++.++|.+.
T Consensus 183 ---~~-~~~~~~d~~~~~~~~ 199 (206)
T d1rkua_ 183 ---FP-AVHTYEDLKREFLKA 199 (206)
T ss_dssp ---SC-EECSHHHHHHHHHHH
T ss_pred ---CE-EECCHHHHHHHHHHH
T ss_conf ---55-626889999999997
|
| >d1iira_ c.87.1.5 (A:) UDP-glucosyltransferase GtfB {Amycolatopsis orientalis [TaxId: 31958]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Gtf glycosyltransferase domain: UDP-glucosyltransferase GtfB species: Amycolatopsis orientalis [TaxId: 31958]
Probab=99.42 E-value=6.2e-10 Score=79.73 Aligned_cols=156 Identities=16% Similarity=0.081 Sum_probs=93.8
Q ss_pred CCCCEEEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCC
Q ss_conf 9985999984899-978999999999764013599849999950899751001018999999999987199997783999
Q 001541 473 PRKPVILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYGQVAYPKH 551 (1057)
Q Consensus 473 ~~~~~Il~vGRl~-~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~~V~f~g~ 551 (1057)
....++++.|... ..+....+++++..+. ....++.+..... ...+.+++.+.++
T Consensus 237 ~~~~i~~~~~~~~~~~~~~~~~~~al~~~~-----~~~~~~~~~~~~~-------------------~~~~~~nv~~~~~ 292 (401)
T d1iira_ 237 GPPPVYLGFGSLGAPADAVRVAIDAIRAHG-----RRVILSRGWADLV-------------------LPDDGADCFAIGE 292 (401)
T ss_dssp SSCCEEEECC---CCHHHHHHHHHHHHHTT-----CCEEECTTCTTCC-------------------CSSCGGGEEECSS
T ss_pred CCCEEEECCCCCCCCHHHHHHHHHHHHHCC-----CEEEEECCCCCCC-------------------CCCCCCCEEEEEC
T ss_conf 897599715754665689999999999769-----8079842677642-------------------3357897899702
Q ss_pred CCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CHHHHHCCCCEEEECCC--CHHHHHH
Q ss_conf 99782999999701499399972998998789999998399699838888----10133039846991999--9999999
Q 001541 552 HKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIHRVLDNGLLVDPH--DQQSVAD 625 (1057)
Q Consensus 552 v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg----~~eii~~~~~Gllv~p~--d~e~la~ 625 (1057)
+|+ .++|..+ ++|| ..|...++.|++++|+|+|+....+ ....++..+.|+.++.. +++++++
T Consensus 293 ~p~---~~~l~~~----~~~V----~hgG~~t~~Eal~~GvP~v~~P~~~DQ~~na~~l~~~G~g~~l~~~~~~~~~l~~ 361 (401)
T d1iira_ 293 VNH---QVLFGRV----AAVI----HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAELGVGVAHDGPIPTFDSLSA 361 (401)
T ss_dssp CCH---HHHGGGS----SEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHHTSEEECSSSSCCHHHHHH
T ss_pred CCH---HHHHHHC----CEEE----ECCCCHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCHHHHHH
T ss_conf 587---9999545----8999----6377169999998199999806614179999999987988876847899999999
Q ss_pred HHHHHHHCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 9999971999999999999899440998999999999998
Q 001541 626 ALLKLVADKQLWARCRQNGLKNIHLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 626 aI~~ll~d~~~~~~~~~~a~~~v~~fsw~~~a~~~l~~l~ 665 (1057)
+|.+++++ +.+++..+-+ +.++..+-...++.+++.+.
T Consensus 362 ai~~~l~~-~~~~~a~~~~-~~~~~~~~~~aa~~i~~~i~ 399 (401)
T d1iira_ 362 ALATALTP-ETHARATAVA-GTIRTDGAAVAARLLLDAVS 399 (401)
T ss_dssp HHHHHTSH-HHHHHHHHHH-HHSCSCHHHHHHHHHHHHHH
T ss_pred HHHHHHCH-HHHHHHHHHH-HHHHHCCHHHHHHHHHHHHH
T ss_conf 99999697-9999999999-99875083999999999984
|
| >d1l5wa_ c.87.1.4 (A:) Maltodextrin phosphorylase (MALP) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Maltodextrin phosphorylase (MALP) species: Escherichia coli [TaxId: 562]
Probab=99.11 E-value=3.5e-07 Score=61.64 Aligned_cols=293 Identities=14% Similarity=0.099 Sum_probs=158.8
Q ss_pred CCEEEEECCCCCHHHHHHHHHC---------------CCCCEEEEECCCCHHHHH---HHHHHHHCCHHHHHHHHHHHH-
Q ss_conf 6509998599814899999803---------------999799992588320479---999951102677877878989-
Q 001541 306 WPVAIHGHYADAGDSAALLSGA---------------LNVPMLFTGHSLGRDKLE---QLLKQARLSRDEINATYKIMR- 366 (1057)
Q Consensus 306 ~pDIIh~h~~~~~~~a~~l~~~---------------~~iP~V~t~H~l~~~~~~---~l~~~g~~~~~~i~~~yk~~~- 366 (1057)
.+++||.+...++.+..-+.+. ....++||.|...+.-.+ .-+-...++. .....+.+..
T Consensus 299 ~~~vihlNEgHpafai~El~R~l~d~~gl~~~~A~e~vr~~~~fTtHTpvpag~e~fp~~li~~~l~~-~~~~i~~i~~~ 377 (796)
T d1l5wa_ 299 DYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDVKLVKGLLPR-HMQIINEINTR 377 (796)
T ss_dssp HHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEHHHHHHHCHH-HHHHHHHHHHH
T ss_pred CHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCEEEEECCCCCHHHCCCCCHHHHHHHHHH-HHHHHHHHHHH
T ss_conf 03546503622777899999999872289899999975251787415786453266279999998388-98777676599
Q ss_pred -------------------------HHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC
Q ss_conf -------------------------8999998750379999469789999995407998478999999682033445889
Q 001541 367 -------------------------RIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKF 421 (1057)
Q Consensus 367 -------------------------ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~ 421 (1057)
.+.+-.+++..+..|-.+|+-..+........ . .+..+
T Consensus 378 fl~~~~~~~~~d~~~~~~~~~~~~~~~~Ma~LAl~~S~~vNGVSklH~ev~~~~~~~---~--------------~~~~~ 440 (796)
T d1l5wa_ 378 FKTLVEKTWPGDEKVWAKLAVVHDKQVHMANLCVVGGFAVNGVAALHSDLVVKDLFP---E--------------YHQLW 440 (796)
T ss_dssp HHHHHHHHSTTCHHHHHHHCSEETTEEEHHHHHHHHSSEEEESSHHHHHHHHHTTSH---H--------------HHHHC
T ss_pred HHHHHHHHCCCCHHHHHHHCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--------------CCCCC
T ss_conf 999999878995888852022106663269999986046679999999999987533---1--------------25568
Q ss_pred CCCEEEECCCCCCCCCCCCC-------------CCCCCCCCCCCCCCCCC-CCC---HHHHHH---------------HH
Q ss_conf 99699949998789867899-------------99999778899999999-982---279987---------------64
Q 001541 422 MPRMAIIPPGMEFHHIVPQD-------------GDMDGETEGNEDNPASP-DPP---IWSEIM---------------RF 469 (1057)
Q Consensus 422 ~~kv~VIpnGiD~~~f~~~~-------------~~~~~~~~~~~~~~~~~-~~~---~~~~~~---------------~~ 469 (1057)
..++.-|-|||....+.... ..-..+........+-. .+. .+.+.+ ..
T Consensus 441 p~~i~~ITNGVh~~~Wl~~~n~~L~~l~~~~ig~~w~~~~~~l~~~~~~~~d~~~~~~l~~~k~~~K~~L~~~i~~~~g~ 520 (796)
T d1l5wa_ 441 PNKFHNVTNGITPRRWIKQCNPALAALLDKSLQKEWANDLDQLINLEKFADDAKFRQQYREIKQANKVRLAEFVKVRTGI 520 (796)
T ss_dssp GGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSSCCTTCGGGGGGGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 76643445661577887432789999987645652134778899888636879999999999999999999999985296
Q ss_pred HCCCCCCEEEEEECCCCCCCHHHHHHHH----HHCCCCC--CCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCC--
Q ss_conf 1799985999984899978999999999----7640135--9984999995089975100101899999999998719--
Q 001541 470 FTNPRKPVILALARPDPKKNITTLVKAF----GECRPLR--ELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYD-- 541 (1057)
Q Consensus 470 ~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~----~~l~~~~--~~~~l~LIvG~~~~~~~~~~~~~~~~~~i~~l~~~~~-- 541 (1057)
..+|+...++++-|+..+|...+++.-. ..+.... +...+++|.++...+.... ..++...|..+.+..+
T Consensus 521 ~ldp~~LtigfaRRfa~YKR~~L~~~~i~~l~~~l~~~~~~~~~Pvq~IfaGKAhP~d~~--gK~iIk~I~~va~~in~d 598 (796)
T d1l5wa_ 521 EINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGYYL--AKNIIFAINKVADVINND 598 (796)
T ss_dssp CCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHTCTTCCCCCEEEEEECCCCTTCHH--HHHHHHHHHHHHHHHHTC
T ss_pred CCCHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHH--HHHHHHHHHHHHHHHCCC
T ss_conf 358565140343454443145303535999999985086457786599974888983178--999999999999986178
Q ss_pred --C--CCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCHHHHHC--CCCEE
Q ss_conf --9--9977839999978299999970149939997299--89987899999983996998388881013303--98469
Q 001541 542 --L--YGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGL 613 (1057)
Q Consensus 542 --l--~~~V~f~g~v~~~ei~~ly~~Aa~~~dv~i~ps~--~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~--~~~Gl 613 (1057)
. ..+|.|+....-+-...++..+ ||-++.|. .|..|..-+-|+.-|.+.+++..|...|+.+. ++||+
T Consensus 599 p~~~~~~kVVFlenYdv~lA~~lv~g~----DVwln~p~~p~EASGTSgMKaalNG~lnlstlDGw~vE~~~~vg~eN~f 674 (796)
T d1l5wa_ 599 PLVGDKLKVVFLPDYCVSAAEKLIPAA----DISEQISTAGKEASGTGNMKLALNGALTVGTLDGANVEIAEKVGEENIF 674 (796)
T ss_dssp TTTGGGEEEEECSSCCHHHHHHHGGGC----SEEEECCCTTTCCCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSE
T ss_pred HHHCCCEEEEEECCCCHHHHHHHHCCC----CHHHHCCCCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHHHCCCCCEE
T ss_conf 554363338980787568999874401----2654099987345782677999859716604664479888863745368
Q ss_pred EECCCCHHHH
Q ss_conf 9199999999
Q 001541 614 LVDPHDQQSV 623 (1057)
Q Consensus 614 lv~p~d~e~l 623 (1057)
++- .+.+++
T Consensus 675 ~fG-~~~~ev 683 (796)
T d1l5wa_ 675 IFG-HTVEQV 683 (796)
T ss_dssp ECS-CCHHHH
T ss_pred EEC-CCHHHH
T ss_conf 806-866777
|
| >d2acva1 c.87.1.10 (A:3-463) Triterpene UDP-glucosyl transferase UGT71G1 {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Triterpene UDP-glucosyl transferase UGT71G1 species: Medicago truncatula [TaxId: 3880]
Probab=99.08 E-value=4.7e-07 Score=60.75 Aligned_cols=372 Identities=13% Similarity=0.088 Sum_probs=165.5
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEE--EECCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 6219999821344445786889999888277999999999823999036999--83387899889756986322589999
Q 001541 164 KKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDL--LTRQVSAPDVDWSYGEPTEMLTPRNS 241 (1057)
Q Consensus 164 ~~l~Illis~~~~~~~~~~~~g~~~d~GG~~~yv~~LA~aLa~~G~v~~V~v--it~~~~~~~~~~~y~~~~e~l~~~~~ 241 (1057)
++..|+|+.. ..-|+..-...||++|+++| |+|++ ++...........+....
T Consensus 6 ~~~hil~~p~---------------P~~GH~~P~l~lA~~L~~rG--H~V~vt~~~~~~~~~~~~~~~~~~~-------- 60 (461)
T d2acva1 6 KNSELIFIPA---------------PGIGHLASALEFAKLLTNHD--KNLYITVFCIKFPGMPFADSYIKSV-------- 60 (461)
T ss_dssp HCEEEEEECC---------------SSTTTHHHHHHHHHHHHHTC--TTEEEEEEECCCTTCCCCHHHHHHH--------
T ss_pred CCCEEEEECC---------------HHHHHHHHHHHHHHHHHHCC--CCEEEEEEECCCCCHHHHHHCCCCC--------
T ss_conf 9990899467---------------03668999999999999779--9849999837853122566505544--------
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHH
Q ss_conf 86344468889929998269996545332357987367898899999998789886635999996509998599814899
Q 001541 242 DDFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYADAGDSA 321 (1057)
Q Consensus 242 ~~~~~~~~~~~gv~iirip~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDIIh~h~~~~~~~a 321 (1057)
.....+++++.++.+.....- .......+...++... ...+...+.......+|+|..+.... .+
T Consensus 61 ------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~vi~d~~~~--~~ 125 (461)
T d2acva1 61 ------LASQPQIQLIDLPEVEPPPQE----LLKSPEFYILTFLESL---IPHVKATIKTILSNKVVGLVLDFFCV--SM 125 (461)
T ss_dssp ------HCSCTTEEEEECCCCCCCCGG----GGGSHHHHHHHHHHHT---HHHHHHHHHHHCCTTEEEEEEEGGGG--GG
T ss_pred ------CCCCCCEEEEECCCCCCCHHH----HHHCHHHHHHHHHHHH---HHHHHHHHHHHCCCCCEEEEEECCCH--HH
T ss_conf ------467898058978887776033----4416899999999999---99999999973148883999704456--99
Q ss_pred HHHHHCCCCCEEEEECCCCHHHHHHHH-HHHHC--------------------C---HH-------HHHHHHHHHHHHHH
Q ss_conf 999803999799992588320479999-95110--------------------2---67-------78778789898999
Q 001541 322 ALLSGALNVPMLFTGHSLGRDKLEQLL-KQARL--------------------S---RD-------EINATYKIMRRIEA 370 (1057)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~-~~g~~--------------------~---~~-------~i~~~yk~~~ri~~ 370 (1057)
..++..+++|.+............... ..... . .. .....+....+
T Consensus 126 ~~~a~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 202 (461)
T d2acva1 126 IDVGNEFGIPSYLFLTSNVGFLSLMLSLKNRQIEEVFDDSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYK--- 202 (461)
T ss_dssp HHHHHHTTCCEEEEESSCHHHHHHHHHGGGSCTTCCCCCSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHH---
T ss_pred HHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHH---
T ss_conf 99999838870897133201567764133344455544445554433564312100344334444302113789999---
Q ss_pred HHHHHHCCCEEEECCHHHHHHHHH--HHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 998750379999469789999995--407998478999999682033445889996999499987898678999999977
Q 001541 371 EELSLDASEIVITSTRQEIEEQWR--LYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQDGDMDGET 448 (1057)
Q Consensus 371 E~~~l~~ad~Vi~~S~~~~~~~~~--~y~~~~~~~~~~l~~~~~~gv~~~g~~~~kv~VIpnGiD~~~f~~~~~~~~~~~ 448 (1057)
.......++.+...+........- +.... ...+.+..+++.+........
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~p~~~~~~~~~~-------- 254 (461)
T d2acva1 203 LAERFRDTKGIIVNTFSDLEQSSIDALYDHD--------------------EKIPPIYAVGPLLDLKGQPNP-------- 254 (461)
T ss_dssp HHHHHTTSSEEEESCCHHHHHHHHHHHHHHC--------------------TTSCCEEECCCCCCSSCCCBT--------
T ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHCC--------------------CCCCCCEEECCCCCCCCCCCC--------
T ss_conf 9986301565332110134423566554224--------------------678971222553024776677--------
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCC-CC-EEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHH
Q ss_conf 88999999999822799876417999-85-99998489997899999999976401359984999995089975100101
Q 001541 449 EGNEDNPASPDPPIWSEIMRFFTNPR-KP-VILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTS 526 (1057)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~ 526 (1057)
............+..... .. +++..+..........+...+..+.. .. ..+.+..+...... ..
T Consensus 255 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~--~~-- 320 (461)
T d2acva1 255 --------KLDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSFGPSQIREIALGLKH-SG-VRFLWSNSAEKKVF--PE-- 320 (461)
T ss_dssp --------TBCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCCCHHHHHHHHHHHHH-HT-CEEEEECCCCGGGS--CT--
T ss_pred --------CCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHH-CC-CCEEEEEECCCCCC--CC--
T ss_conf --------755457177888876177653034521344357999999999999985-37-60799840454558--86--
Q ss_pred HHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----
Q ss_conf 8999999999987199997783999997829999997014993999729989987899999983996998388881----
Q 001541 527 ASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP---- 602 (1057)
Q Consensus 527 ~~~~~~i~~l~~~~~l~~~V~f~g~v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg~---- 602 (1057)
...+.....+++.+..+.++.++. .+..+ ++|| .-|-..++.||+.+|+|+|+....+=
T Consensus 321 --------~~~~~~~~~~n~~v~~~~pq~~~l-~~p~~----~~fI----tHGG~gs~~eAl~~GVP~l~~P~~~DQ~~n 383 (461)
T d2acva1 321 --------GFLEWMELEGKGMICGWAPQVEVL-AHKAI----GGFV----SHCGWNSILESMWFGVPILTWPIYAEQQLN 383 (461)
T ss_dssp --------THHHHHHHHCSEEEESSCCHHHHH-HSTTE----EEEE----ECCCHHHHHHHHHTTCCEEECCCSTTHHHH
T ss_pred --------CCHHHHCCCCCEEEEECCCHHHHH-HCCCC----CEEE----ECCCCCHHHHHHHCCCCEEECCCCCCHHHH
T ss_conf --------303331257873898518778888-55657----7798----338844899999859998967760002889
Q ss_pred HH-HHHCCCCEEEECC--------CCHHHHHHHHHHHHHC-HHHH
Q ss_conf 01-3303984699199--------9999999999999719-9999
Q 001541 603 VD-IHRVLDNGLLVDP--------HDQQSVADALLKLVAD-KQLW 637 (1057)
Q Consensus 603 ~e-ii~~~~~Gllv~p--------~d~e~la~aI~~ll~d-~~~~ 637 (1057)
.. +++..+.|+.++. -+.++++++|.++|++ +..+
T Consensus 384 A~rlve~~G~G~~l~~~~~~~~~~~t~~~l~~a~~~vl~~d~~~r 428 (461)
T d2acva1 384 AFRLVKEWGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDKDSIVH 428 (461)
T ss_dssp HHHHHHTSCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCTTCTHH
T ss_pred HHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCHHHH
T ss_conf 999999849367841531136785479999999999960889999
|
| >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Bacillus subtilis [TaxId: 1423]
Probab=99.02 E-value=5.5e-07 Score=60.31 Aligned_cols=356 Identities=12% Similarity=0.108 Sum_probs=189.3
Q ss_pred CCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEE-ECCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 62199998213444457868899998882779999999998239990369998-33878998897569863225899998
Q 001541 164 KKLYIVLISIHGLIRGENMELGRDSDTGGQVKYVVELARALGSMPGVYRVDLL-TRQVSAPDVDWSYGEPTEMLTPRNSD 242 (1057)
Q Consensus 164 ~~l~Illis~~~~~~~~~~~~g~~~d~GG~~~yv~~LA~aLa~~G~v~~V~vi-t~~~~~~~~~~~y~~~~e~l~~~~~~ 242 (1057)
++|||++|. | |-..-.-+.-|.++|.+.++ .++.++ |.++.+ . . +
T Consensus 1 ~k~Ki~~v~--G--------------tR~e~~kl~pli~~l~~~~~-~~~~li~tG~H~~--~----~-----------~ 46 (377)
T d1o6ca_ 1 KKLKVMTVF--G--------------TRPEAIKMAPLVLELKKYPE-IDSYVTVTAQHRQ--M----L-----------D 46 (377)
T ss_dssp CCEEEEEEE--C--------------SHHHHHHHHHHHHHGGGCTT-EEEEEEECCSCGG--G----T-----------H
T ss_pred CCCEEEEEE--E--------------CHHHHHHHHHHHHHHHHCCC-CCEEEEEECCCHH--H----H-----------H
T ss_conf 984699999--7--------------05859999999999971899-9879999379889--9----9-----------9
Q ss_pred CCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CCHHHH
Q ss_conf 6344468889929998269996545332357987367898899999998789886635999996509998599-814899
Q 001541 243 DFMDDMGESSGAYIIRIPFGPKDKYIAKELLWPHIPEFVDGALNHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSA 321 (1057)
Q Consensus 243 ~~~~~~~~~~gv~iirip~~~~~~~l~k~~l~~~l~~f~~~~l~~~~~~~k~L~~~~~~~~~~~pDIIh~h~~-~~~~~a 321 (1057)
.+.++..-.+. +.+..... . . ......-..+..+.+.+.+ .+||+|..+.- ....++
T Consensus 47 ~~~~~~~i~~~---~~~~~~~~-------~--~---~~~~~~~~~i~~~~~~~~~-------~kpD~v~v~GDr~e~la~ 104 (377)
T d1o6ca_ 47 QVLDAFHIKPD---FDLNIMKE-------R--Q---TLAEITSNALVRLDELFKD-------IKPDIVLVHGDTTTTFAG 104 (377)
T ss_dssp HHHHHTTCCCS---EECCCCCT-------T--C---CHHHHHHHHHHHHHHHHHH-------HCCSEEEEETTCHHHHHH
T ss_pred HHHHHCCCCCC---EEEECCCC-------C--C---CHHHHHHHHHHHHHHHHHH-------CCCCEEEEEECCCCCCHH
T ss_conf 99851687775---35443889-------9--8---8999999999850566653-------366536764034543015
Q ss_pred HHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCH
Q ss_conf 99980399979999258832047999995110267787787898989999987503799994697899999954079984
Q 001541 322 ALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDP 401 (1057)
Q Consensus 322 ~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~yk~~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~ 401 (1057)
+..+..+++|+++-.-+.-.... ....+.. ..|. .+-.-|+..+|+++...+.+...
T Consensus 105 a~aa~~~~Ipi~HiegG~~s~~~---------~~~~~de---~~R~-----~iskls~~hf~~t~~~~~~L~~~------ 161 (377)
T d1o6ca_ 105 SLAAFYHQIAVGHVEAGLRTGNK---------YSPFPEE---LNRQ-----MTGAIADLHFAPTGQAKDNLLKE------ 161 (377)
T ss_dssp HHHHHHTTCEEEEESCCCCCSCT---------TTTTTHH---HHHH-----HHHHHCSEEEESSHHHHHHHHHT------
T ss_pred HHHHHHCCCEEEEEECCCCCCCC---------CCCCCHH---HHCC-----CCCCCEEEEEECCHHHHHHHHHH------
T ss_conf 66653114227999514565433---------2347145---5400-----35653048863234666344330------
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEE
Q ss_conf 789999996820334458899969994999-8789867899999997788999999999822799876417999859999
Q 001541 402 VLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIVPQDGDMDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILA 480 (1057)
Q Consensus 402 ~~~~~l~~~~~~gv~~~g~~~~kv~VIpnG-iD~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~ 480 (1057)
|....++.++-+. +|.-......... .. . ......+..+++.
T Consensus 162 -----------------G~~~~~I~~vG~~~~D~i~~~~~~~~~----~~---------------~-~~~~~~~~~ilvt 204 (377)
T d1o6ca_ 162 -----------------NKKADSIFVTGNTAIDALNTTVRDGYS----HP---------------V-LDQVGEDKMILLT 204 (377)
T ss_dssp -----------------TCCGGGEEECCCHHHHHHHHHCCSSCC----CS---------------T-TTTTTTSEEEEEC
T ss_pred -----------------CCCCCEEEECCCHHHHHHHHHHHHHHH----HH---------------H-HHHCCCCCEEEEE
T ss_conf -----------------344542752342067888877777775----33---------------3-4430578449998
Q ss_pred EECCCCC-CCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHH-HHHHCCCCCCEEECCCCCCCCHH
Q ss_conf 8489997-899999999976401359984999995089975100101899999999-99871999977839999978299
Q 001541 481 LARPDPK-KNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLK-LIDKYDLYGQVAYPKHHKQSDVP 558 (1057)
Q Consensus 481 vGRl~~~-Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~i~~-l~~~~~l~~~V~f~g~v~~~ei~ 558 (1057)
+-|..-. +.....+.++..+.... ....++....+. ..+.. +...+...+++.+...++..+..
T Consensus 205 ~Hr~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~~------------~~~~~~~~~~~~~~~ni~~~~~l~~~~fl 270 (377)
T d1o6ca_ 205 AHRRENLGEPMENMFKAIRRIVGEF--EDVQVVYPVHLN------------PVVREAAHKHFGDSDRVHLIEPLEVIDFH 270 (377)
T ss_dssp C----------HHHHHHHHHHHHHC--TTEEEEEC----------------CHHHHHHHHC--CCSSEEECCCCCHHHHH
T ss_pred ECCCCCCCCCHHHHHHHHHHHCCCC--CCCCCCCCCCCC------------CCCCHHHHHCCCCCCCEEECCCCCHHHHH
T ss_conf 3231014663378999987521233--556532345521------------13211221013456514751321368899
Q ss_pred HHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCC-CCCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCHHHH
Q ss_conf 99997014993999729989987899999983996998388-88101330398469919999999999999997199999
Q 001541 559 EIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKN-GGPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLW 637 (1057)
Q Consensus 559 ~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~-Gg~~eii~~~~~Gllv~p~d~e~la~aI~~ll~d~~~~ 637 (1057)
.+++.| +++|--| |-...||...|+|+|.-.. +.-++.++.+ +-+++++ |.+++.+++.+++.++..+
T Consensus 271 ~llk~s----~~vIgnS-----ss~i~Ea~~lg~P~Inir~~tERqe~~~~g-~nilv~~-~~~~I~~~i~~~l~~~~~~ 339 (377)
T d1o6ca_ 271 NFAAKS----HFILTDS-----GGVQEEAPSLGKPVLVLRDTTERPEGVEAG-TLKLAGT-DEENIYQLAKQLLTDPDEY 339 (377)
T ss_dssp HHHHHC----SEEEEC-------CHHHHGGGGTCCEEEECSCCC---CTTTT-SSEEECS-CHHHHHHHHHHHHHCHHHH
T ss_pred HHHHHH----HEEECCC-----CHHHHHHHHHHCEEEEECCCCCCCCHHHCC-EEEECCC-CHHHHHHHHHHHHHCHHHH
T ss_conf 998642----2564164-----046776666541489807887582200068-0598789-9999999999997496877
Q ss_pred HHHHHHHHHHH-HCCCHHHHHHHHHHHHH
Q ss_conf 99999998994-40998999999999998
Q 001541 638 ARCRQNGLKNI-HLFSWPEHCKTYLSRIA 665 (1057)
Q Consensus 638 ~~~~~~a~~~v-~~fsw~~~a~~~l~~l~ 665 (1057)
..+.+ . .-|.-...+++..+.+.
T Consensus 340 ~~~~~-----~~npYGdG~as~rI~~~L~ 363 (377)
T d1o6ca_ 340 KKMSQ-----ASNPYGDGEASRRIVEELL 363 (377)
T ss_dssp HHHHH-----CCCTTCCSCHHHHHHHHHH
T ss_pred HHHCC-----CCCCCCCCHHHHHHHHHHH
T ss_conf 63065-----8898989829999999999
|
| >d2pq6a1 c.87.1.10 (A:8-480) (Iso)flavonoid glycosyltransferase {Medicago truncatula [TaxId: 3880]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: (Iso)flavonoid glycosyltransferase species: Medicago truncatula [TaxId: 3880]
Probab=99.02 E-value=3.6e-07 Score=61.53 Aligned_cols=94 Identities=12% Similarity=0.137 Sum_probs=67.2
Q ss_pred CCCEEECCCCCCCCHHHHHH--HHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCC----CHHHH-HCCCCEEEE
Q ss_conf 99778399999782999999--701499399972998998789999998399699838888----10133-039846991
Q 001541 543 YGQVAYPKHHKQSDVPEIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGG----PVDIH-RVLDNGLLV 615 (1057)
Q Consensus 543 ~~~V~f~g~v~~~ei~~ly~--~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg----~~eii-~~~~~Gllv 615 (1057)
..+|.+..++|+. +++. .+ ++|| .-|-..++.||+.+|+|+|+....+ ....+ +..+.|+.+
T Consensus 345 ~~Nv~~~~~~Pq~---~lL~hp~~----~~fI----tHGG~~s~~Eal~~GVP~lv~P~~~DQ~~na~rv~~~~G~G~~l 413 (473)
T d2pq6a1 345 ADRGLIASWCPQD---KVLNHPSI----GGFL----THCGWNSTTESICAGVPMLCWPFFADQPTDCRFICNEWEIGMEI 413 (473)
T ss_dssp TTTEEEESCCCHH---HHHTSTTE----EEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCEEEEEECCHH---HHHCCCCC----CEEE----ECCCCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCEEEEE
T ss_conf 4766886308879---99647767----5999----56884089999985999896564112188999999971737861
Q ss_pred CCC-CHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
Q ss_conf 999-999999999999719999999999998994
Q 001541 616 DPH-DQQSVADALLKLVADKQLWARCRQNGLKNI 648 (1057)
Q Consensus 616 ~p~-d~e~la~aI~~ll~d~~~~~~~~~~a~~~v 648 (1057)
+.. +.++++++|.++++|+.- .++++++.+..
T Consensus 414 ~~~~t~~~l~~ai~~vl~d~~~-~~~r~~a~~l~ 446 (473)
T d2pq6a1 414 DTNVKREELAKLINEVIAGDKG-KKMKQKAMELK 446 (473)
T ss_dssp CSSCCHHHHHHHHHHHHTSHHH-HHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHCCCHH-HHHHHHHHHHH
T ss_conf 8973899999999999769768-99999999999
|
| >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Thermus thermophilus [TaxId: 274]
Probab=98.98 E-value=3.1e-07 Score=61.99 Aligned_cols=284 Identities=12% Similarity=0.025 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCEEEEECCC-CCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHH
Q ss_conf 999998789886635999996509998599-8148999998039997999925883204799999511026778778789
Q 001541 286 NHIIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKI 364 (1057)
Q Consensus 286 ~~~~~~~k~L~~~~~~~~~~~pDIIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~yk~ 364 (1057)
..+..+.+.+.+ .+||+|..+.- .....++..+...++|+++..-+.-.... ....... +
T Consensus 75 ~~~~~~~~~l~~-------~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rsg~~---------~~~~~de---~ 135 (373)
T d1v4va_ 75 RILPQAARALKE-------MGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRSGNL---------KEPFPEE---A 135 (373)
T ss_dssp HHHHHHHHHHHH-------TTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCCSCT---------TSSTTHH---H
T ss_pred HHHHHHHHHHHH-------CCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCC---------CCCCCHH---H
T ss_conf 999987666640-------37640011136753103778898762122241343455433---------5676166---6
Q ss_pred HHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCCCCCCC
Q ss_conf 8989999987503799994697899999954079984789999996820334458899969994999-878986789999
Q 001541 365 MRRIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIVPQDGD 443 (1057)
Q Consensus 365 ~~ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~kv~VIpnG-iD~~~f~~~~~~ 443 (1057)
.|.+ +-.-|+..+|+|+...+.+... |....++.++-+. +|.-........
T Consensus 136 ~R~~-----iskls~~hf~~t~~~~~~L~~~-----------------------Ge~~~~I~~vG~p~~D~i~~~~~~~~ 187 (373)
T d1v4va_ 136 NRRL-----TDVLTDLDFAPTPLAKANLLKE-----------------------GKREEGILVTGQTGVDAVLLAAKLGR 187 (373)
T ss_dssp HHHH-----HHHHCSEEEESSHHHHHHHHTT-----------------------TCCGGGEEECCCHHHHHHHHHHHHCC
T ss_pred HHHH-----HCCCCCEEEECCHHHHHHHHHH-----------------------CCCCCCEEECCCCHHHHHHHHHHHCC
T ss_conf 6655-----2234432551221566666663-----------------------04542134426621557776543110
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCC
Q ss_conf 99977889999999998227998764179998599998489997899999999976401359984999995089975100
Q 001541 444 MDGETEGNEDNPASPDPPIWSEIMRFFTNPRKPVILALARPDPKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDEMS 523 (1057)
Q Consensus 444 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Il~vGRl~~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~ 523 (1057)
.......+...++.+-|....++...+.+++..+.+......+.+.....+
T Consensus 188 -----------------------~~~~~~~~~~~lvt~hr~~n~~~~~~~~~~~~~~~~~~~~~~~i~p~~~~~------ 238 (373)
T d1v4va_ 188 -----------------------LPEGLPEGPYVTVTMHRRENWPLLSDLAQALKRVAEAFPHLTFVYPVHLNP------ 238 (373)
T ss_dssp -----------------------CCTTCCSSCEEEECCCCGGGGGGHHHHHHHHHHHHHHCTTSEEEEECCSCH------
T ss_pred -----------------------CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC------
T ss_conf -----------------------002234455316884265553127899999999865335650356403422------
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECC-CCCC
Q ss_conf 101899999999998719999778399999782999999701499399972998998789999998399699838-8881
Q 001541 524 STSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATK-NGGP 602 (1057)
Q Consensus 524 ~~~~~~~~~i~~l~~~~~l~~~V~f~g~v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~-~Gg~ 602 (1057)
.... ...+......++.+...++..+...+++.| .+++--| |-...||..+|+|+|.-. .|.-
T Consensus 239 ----~~~~---~~~~~~~~~~n~~~~~~l~~~~~l~ll~~s----~~vignS-----ssgi~Ea~~lg~P~Inir~~~eR 302 (373)
T d1v4va_ 239 ----VVRE---AVFPVLKGVRNFVLLDPLEYGSMAALMRAS----LLLVTDS-----GGLQEEGAALGVPVVVLRNVTER 302 (373)
T ss_dssp ----HHHH---HHHHHHTTCTTEEEECCCCHHHHHHHHHTE----EEEEESC-----HHHHHHHHHTTCCEEECSSSCSC
T ss_pred ----CCHH---HHHHHHCCCCCCEEECCCHHHHHHHHHHHC----EEEECCC-----CHHHHCCHHHCCCEEEECCCCCC
T ss_conf ----2103---555543033320011100078888876430----1685064-----12222003205868984887669
Q ss_pred HHHHHCCCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHCCC
Q ss_conf 0133039846991999999999999999719999999999998994-40998999999999998033
Q 001541 603 VDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAGCK 668 (1057)
Q Consensus 603 ~eii~~~~~Gllv~p~d~e~la~aI~~ll~d~~~~~~~~~~a~~~v-~~fsw~~~a~~~l~~l~~~~ 668 (1057)
++-++.+.+ +++. .|.+++.++|.+++.++..+..+.. . .-|.=...+++..+.+.+-.
T Consensus 303 qeg~~~g~n-vlv~-~d~~~I~~~i~~~l~~~~~~~~~~~-----~~npYGdG~as~rI~~~L~~~~ 362 (373)
T d1v4va_ 303 PEGLKAGIL-KLAG-TDPEGVYRVVKGLLENPEELSRMRK-----AKNPYGDGKAGLMVARGVAWRL 362 (373)
T ss_dssp HHHHHHTSE-EECC-SCHHHHHHHHHHHHTCHHHHHHHHH-----SCCSSCCSCHHHHHHHHHHHHT
T ss_pred HHHHHCCEE-EECC-CCHHHHHHHHHHHHCCHHHHHHCCC-----CCCCCCCCHHHHHHHHHHHHHH
T ss_conf 878962904-9758-9999999999999719898864024-----8898989879999999999984
|
| >d2c4na1 c.108.1.14 (A:1-250) NagD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: NagD species: Escherichia coli [TaxId: 562]
Probab=98.91 E-value=7.1e-08 Score=66.17 Aligned_cols=56 Identities=9% Similarity=0.106 Sum_probs=46.0
Q ss_pred CEEEEEEECCCC--CCCCHHHHHHHHHHHHHHHCCCCEEEEEEC---CCCHHHHHHHHHHCCCCC
Q ss_conf 659999831799--974039999999999844038983899978---999888999999389999
Q 001541 774 KHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLSP 833 (1057)
Q Consensus 774 kkliv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~vvIaT---GR~~~~i~~~l~~l~l~~ 833 (1057)
.|.++||+|||| ...+.+.+.++|+.+++. |+.++++| +|+..++.+.+..+|++.
T Consensus 3 ik~VifDlDGTL~~~~~~i~~a~e~i~~l~~~----g~~~~~~TN~~~~~~~~~~~~l~~~G~~~ 63 (250)
T d2c4na1 3 IKNVICDIDGVLMHDNVAVPGAAEFLHGIMDK----GLPLVLLTNYPSQTGQDLANRFATAGVDV 63 (250)
T ss_dssp CCEEEEECBTTTEETTEECTTHHHHHHHHHHT----TCCEEEEESCCSCCHHHHHHHHHHTTCCC
T ss_pred CCEEEEECCCEEEECCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHCCCCC
T ss_conf 87999979980187998582099999999977----99589992899999999988876303566
|
| >d2gj4a1 c.87.1.4 (A:12-835) Glycogen phosphorylase {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Oligosaccharide phosphorylase domain: Glycogen phosphorylase species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=98.89 E-value=2.6e-06 Score=55.92 Aligned_cols=273 Identities=14% Similarity=0.119 Sum_probs=160.2
Q ss_pred HHHHHHCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCC-CCC-----
Q ss_conf 99875037999946978999999540799847899999968203344588999699949998789867899-999-----
Q 001541 371 EELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPGMEFHHIVPQD-GDM----- 444 (1057)
Q Consensus 371 E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~kv~VIpnGiD~~~f~~~~-~~~----- 444 (1057)
-.+++..+..|-.+|+-.-+...... +.+. +.....++.-|-|||....+.... +..
T Consensus 431 a~Lal~~S~~vNGVSklH~ev~~~~~--~~~~---------------~~~~p~ki~~iTNGV~~rrWl~~~np~L~~l~~ 493 (824)
T d2gj4a1 431 AHLCIAGSHAVNGVARIHSEILKKTI--FKDF---------------YELEPHKFQNKTNGITPRRWLVLCNPGLAEIIA 493 (824)
T ss_dssp HHHHHHTCSCEEESSHHHHHHHHHTT--THHH---------------HHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHH
T ss_pred HHHHHHHCHHHHHHHHHHHHHHHHHH--CCCC---------------CCCCCCCEECCCCCCCCCCCHHCCCHHHHHHHH
T ss_conf 99999864267889999999999764--3565---------------667872402664751576113116977999877
Q ss_pred ----------CCCCCCCCCCCCCCCCCHHHH---H------------HH---HHCCCCCCEEEEEECCCCCCCHHH----
Q ss_conf ----------997788999999999822799---8------------76---417999859999848999789999----
Q 001541 445 ----------DGETEGNEDNPASPDPPIWSE---I------------MR---FFTNPRKPVILALARPDPKKNITT---- 492 (1057)
Q Consensus 445 ----------~~~~~~~~~~~~~~~~~~~~~---~------------~~---~~~~~~~~~Il~vGRl~~~Kgi~~---- 492 (1057)
...+.+.... ..++..+.. . .+ ....|+...++++-|+..+|...+
T Consensus 494 ~~ig~~w~~d~~~l~~l~~~--~~d~~~~~~~~~~k~~~K~~L~~~i~~~~g~~ldp~~lfd~~arRfheYKRq~Ln~~~ 571 (824)
T d2gj4a1 494 ERIGEEYISDLDQLRKLLSY--VDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLH 571 (824)
T ss_dssp HHHCSGGGGCGGGGGGGGGG--TTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHH
T ss_pred HHHCCCCCCCHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHEEECHHHHHHHHHHHH
T ss_conf 54344322598999998873--8989999999999998289999999998387789641101310000233334566765
Q ss_pred HHHHHHHCCCC--CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC------CCEEECCCCCCCCHHHHHHHH
Q ss_conf 99999764013--5998499999508997510010189999999999871999------977839999978299999970
Q 001541 493 LVKAFGECRPL--RELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLY------GQVAYPKHHKQSDVPEIYRLA 564 (1057)
Q Consensus 493 Ll~A~~~l~~~--~~~~~l~LIvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~------~~V~f~g~v~~~ei~~ly~~A 564 (1057)
++.-+.++... .+...+++|.|+...+.... ..++...|..+.+..+.. .+|.|+....-+-...++..|
T Consensus 572 i~~ly~rlk~~~~~~~~P~q~IFaGKAhP~d~~--gK~iIk~I~~va~~in~dp~~~~~lkVvFlenY~v~lA~~li~g~ 649 (824)
T d2gj4a1 572 VITLYNRIKKEPNKFVVPRTVMIGGKAAPGYHM--AKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAA 649 (824)
T ss_dssp HHHHHHHHHHCTTSCCCCEEEEEECCCCTTCHH--HHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGC
T ss_pred HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHH--HHHHHHHHHHHHHHHHCCHHHCCCEEEEECCCCCHHHHHHHHHHH
T ss_conf 899998765345678887499980788976388--999999999999987418112153448870787669999751143
Q ss_pred HCCCCEEEECCC--CCCCCHHHHHHHHCCCCEEECCCCCCHHHHHC--CCCEEEECC------------CCHHHHHHH--
Q ss_conf 149939997299--89987899999983996998388881013303--984699199------------999999999--
Q 001541 565 AKTKGVFINPAF--IEPFGLTLIEAAAHGLPIVATKNGGPVDIHRV--LDNGLLVDP------------HDQQSVADA-- 626 (1057)
Q Consensus 565 a~~~dv~i~ps~--~Egfgl~llEAmA~G~PVIat~~Gg~~eii~~--~~~Gllv~p------------~d~e~la~a-- 626 (1057)
||.++.|. .|..|..-+-+|.-|.+.++|..|...|+.+. +.||+++-. .|+.++.+.
T Consensus 650 ----Dvwln~p~~~~EASGTSgMK~alNGal~lstlDGwnvEi~~~vg~~N~~~fG~~~~ev~~~~~~~y~~~~~y~~~~ 725 (824)
T d2gj4a1 650 ----DLSEQISTAGTEASGTGNMKFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRGYNAQEYYDRIP 725 (824)
T ss_dssp ----SEEEECCCTTSCSCCSHHHHHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHCCCHHHHHHHCH
T ss_pred ----HHHHCCCCCCCCCCCCCHHHHHHCCCEEECCCCCHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCHHHHHHHCH
T ss_conf ----4413189997345775045899759835635663589999864756679817971555577655789899975399
Q ss_pred --------------------------------------------------HHHHHHCHHHHHHHHHHHHHHHHCCCHHHH
Q ss_conf --------------------------------------------------999971999999999999899440998999
Q 001541 627 --------------------------------------------------LLKLVADKQLWARCRQNGLKNIHLFSWPEH 656 (1057)
Q Consensus 627 --------------------------------------------------I~~ll~d~~~~~~~~~~a~~~v~~fsw~~~ 656 (1057)
+.....+|..|.++........-.||.+++
T Consensus 726 ~l~~v~d~i~~~~~~~~~~~~f~~l~~~l~~~D~y~v~~Df~~y~~~q~~v~~~Y~d~~~W~~~~~~nia~~g~FssdR~ 805 (824)
T d2gj4a1 726 ELRQIIEQLSSGFFSPKQPDLFKDIVNMLMHHDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRT 805 (824)
T ss_dssp HHHHHHHHHHHTTTCTTSTTTTHHHHHHHHHCCTTCTGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHH
T ss_pred HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHH
T ss_conf 99999998502667888704678899988537704554128999999999998631999999999999865898072889
Q ss_pred HHHHHHHHHCCC
Q ss_conf 999999998033
Q 001541 657 CKTYLSRIAGCK 668 (1057)
Q Consensus 657 a~~~l~~l~~~~ 668 (1057)
.+.|.+-+-.+.
T Consensus 806 i~eY~~~iw~~~ 817 (824)
T d2gj4a1 806 IAQYAREIWGVE 817 (824)
T ss_dssp HHHHHHHTTCCC
T ss_pred HHHHHHHCCCCC
T ss_conf 999999701973
|
| >d1yv9a1 c.108.1.14 (A:4-256) Putative hydrolase EF1188 {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative hydrolase EF1188 species: Enterococcus faecalis [TaxId: 1351]
Probab=98.82 E-value=7.2e-09 Score=72.72 Aligned_cols=51 Identities=18% Similarity=0.219 Sum_probs=38.8
Q ss_pred CCCCCHHH--HHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 29999999--9999999949984548999568888770110267660-89937976
Q 001541 955 PVLASRSQ--ALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 955 P~gaSKg~--AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~-gVaMgNa~ 1007 (1057)
+...+|.. ...++++++|++++++++ +||+.+|| +.|...+|. +|.|..+.
T Consensus 175 ~~~~~KP~~~~~~~~~~~~gi~~~~~l~-IGD~~~~D-I~~a~~aG~~si~V~~G~ 228 (253)
T d1yv9a1 175 PVYIGKPKAIIMERAIAHLGVEKEQVIM-VGDNYETD-IQSGIQNGIDSLLVTSGF 228 (253)
T ss_dssp CEECSTTSHHHHHHHHHHHCSCGGGEEE-EESCTTTH-HHHHHHHTCEEEEETTSS
T ss_pred EEEECCCCHHHHHHHHHHHCCCCCCEEE-ECCCHHHH-HHHHHHCCCCEEEECCCC
T ss_conf 3651343126787899984888442378-43782779-999998799899989899
|
| >d1vjra_ c.108.1.14 (A:) Hypothetical protein TM1742 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Hypothetical protein TM1742 species: Thermotoga maritima [TaxId: 2336]
Probab=98.77 E-value=2.3e-08 Score=69.34 Aligned_cols=199 Identities=14% Similarity=0.139 Sum_probs=100.2
Q ss_pred CCCEEEEEEECCCC--CCCCHHHHHHHHHHHHHHHCCCCEEEEEEC---CCCHHHHHHHHHHCCCCCCCCCEEEECCCCE
Q ss_conf 76659999831799--974039999999999844038983899978---9998889999993899999998699679957
Q 001541 772 RRKHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVSGHLSPSDFDAFICNSGSD 846 (1057)
Q Consensus 772 ~~kkliv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~vvIaT---GR~~~~i~~~l~~l~l~~~~~D~lI~~nGa~ 846 (1057)
.+.|+++||+|||| .....+.+.++|++++++ |+.|+++| +|+...+...+..+|++. .++-++++....
T Consensus 5 ~~ik~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~----g~~~~~~TN~~~~~~~~~~~~~~~~g~~~-~~~~v~ts~~~~ 79 (261)
T d1vjra_ 5 DKIELFILDMDGTFYLDDSLLPGSLEFLETLKEK----NKRFVFFTNNSSLGAQDYVRKLRNMGVDV-PDDAVVTSGEIT 79 (261)
T ss_dssp GGCCEEEECCBTTTEETTEECTTHHHHHHHHHHT----TCEEEEEESCTTSCHHHHHHHHHHTTCCC-CGGGEEEHHHHH
T ss_pred HHCCEEEEECCCEEEECCCCCCHHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCC-CCCEECCHHHHH
T ss_conf 7499999959885687991683199999999976----99889995899999899999998523566-501034589999
Q ss_pred EEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCH
Q ss_conf 98245788899842242101100234462349999998621013322235665345532246862689993299999308
Q 001541 847 LYYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPV 926 (1057)
Q Consensus 847 I~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 926 (1057)
..+- .+......+ +......+......+.....+ + .........+.....
T Consensus 80 ~~~~----------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~----------------~~~~~~~~~~~~~~~-- 129 (261)
T d1vjra_ 80 AEHM----------LKRFGRCRI-FLLGTPQLKKVFEAYGHVIDE-E----------------NPDFVVLGFDKTLTY-- 129 (261)
T ss_dssp HHHH----------HHHHCSCEE-EEESCHHHHHHHHHTTCEECS-S----------------SCSEEEECCCTTCCH--
T ss_pred HHHH----------HHHCCCCEE-EEECCCCHHHHHHHCCCCCCH-H----------------HCCEEEECCCCCCCH--
T ss_conf 9999----------986379638-983564305788861950250-1----------------012057457765346--
Q ss_pred HHHHHHHHHHCCCEEEEEEECCEE------------------------EEEECCCCCHHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf 999999987359089999608915------------------------99712999999999999999499845489995
Q 001541 927 KELRKVLRIQALRCHVIYCQNGSR------------------------INVIPVLASRSQALRYLYLRWGVELSKMVVFV 982 (1057)
Q Consensus 927 ~el~~~L~~~~~~~~v~~s~~~~~------------------------ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~ 982 (1057)
......+........++....... .+.+..+-........+++++|++++++++ +
T Consensus 130 ~~~~~~~~~~~~~~~~i~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~KP~p~~~~~a~~~l~~~~~~~lm-V 208 (261)
T d1vjra_ 130 ERLKKACILLRKGKFYIATHPDINCPSKEGPVPDAGSIMAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERMAM-V 208 (261)
T ss_dssp HHHHHHHHHHTTTCEEEESCCCSEECCTTSCEECHHHHHHHHHHHHSCCCSEECSTTSTHHHHHHHHHHTCCGGGEEE-E
T ss_pred HHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCE-E
T ss_conf 889999887503740122467754557887141452066777653132121366799578888887664047221103-1
Q ss_pred CCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 68888770110267660-89937976
Q 001541 983 GESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 983 GD~~d~D~ieML~~ag~-gVaMgNa~ 1007 (1057)
||+-+|| +.|-..+|. +|.+..+.
T Consensus 209 GD~~~~D-I~ga~~aG~~si~V~~G~ 233 (261)
T d1vjra_ 209 GDRLYTD-VKLGKNAGIVSILVLTGE 233 (261)
T ss_dssp ESCHHHH-HHHHHHHTCEEEEESSSS
T ss_pred CCCHHHH-HHHHHHCCCCEEEECCCC
T ss_conf 6871678-999998799699989899
|
| >d2c1xa1 c.87.1.10 (A:7-456) UDP glucose:flavonoid 3-o-glucosyltransferase {Grape (Vitis vinifera) [TaxId: 29760]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: UDP glucose:flavonoid 3-o-glucosyltransferase species: Grape (Vitis vinifera) [TaxId: 29760]
Probab=98.76 E-value=3.7e-07 Score=61.46 Aligned_cols=91 Identities=18% Similarity=0.225 Sum_probs=63.6
Q ss_pred CCCEEECCCCCCCCHHHHH--HHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCCH----HHH-HCCCCEEEE
Q ss_conf 9977839999978299999--970149939997299899878999999839969983888810----133-039846991
Q 001541 543 YGQVAYPKHHKQSDVPEIY--RLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGPV----DIH-RVLDNGLLV 615 (1057)
Q Consensus 543 ~~~V~f~g~v~~~ei~~ly--~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg~~----eii-~~~~~Gllv 615 (1057)
..++.+..++|+. .++ ..+ ++|| .-|-..++.||+.+|+|+|+....+=. ..+ +..+.|+.+
T Consensus 318 ~~nv~~~~~~pq~---~lL~hp~~----~~fI----tHGG~~s~~eal~~GvP~v~~P~~~DQ~~na~rv~~~~G~G~~l 386 (450)
T d2c1xa1 318 RGYGMVVPWAPQA---EVLAHEAV----GAFV----THCGWNSLWESVAGGVPLICRPFFGDQRLNGRMVEDVLEIGVRI 386 (450)
T ss_dssp TTTEEEESCCCHH---HHHTSTTE----EEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTSCCEEEC
T ss_pred CCCCCCCCCCCHH---HHHCCCCE----EEEE----CCCCCCHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 3540155467837---66526741----6997----06883079999985999896354000089999999970908980
Q ss_pred CCC--CHHHHHHHHHHHHHCHHHHHHHHHHHH
Q ss_conf 999--999999999999719999999999998
Q 001541 616 DPH--DQQSVADALLKLVADKQLWARCRQNGL 645 (1057)
Q Consensus 616 ~p~--d~e~la~aI~~ll~d~~~~~~~~~~a~ 645 (1057)
+.. +.+++.++|.++|+++.. ++.++++.
T Consensus 387 ~~~~~t~~~l~~ai~~vL~d~~y-~~~~~r~~ 417 (450)
T d2c1xa1 387 EGGVFTKSGLMSCFDQILSQEKG-KKLRENLR 417 (450)
T ss_dssp GGGSCCHHHHHHHHHHHHHSHHH-HHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHCCCHH-HHHHHHHH
T ss_conf 38983899999999999619479-99999999
|
| >d2vcha1 c.87.1.10 (A:6-476) Hydroquinone glucosyltransferase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDPGT-like domain: Hydroquinone glucosyltransferase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.69 E-value=1.1e-05 Score=51.87 Aligned_cols=93 Identities=14% Similarity=0.109 Sum_probs=63.9
Q ss_pred CCCCEEECCCCCCCCHHHHHH--HHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCCCC----HHHH-HCCCCEEE
Q ss_conf 999778399999782999999--7014993999729989987899999983996998388881----0133-03984699
Q 001541 542 LYGQVAYPKHHKQSDVPEIYR--LAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNGGP----VDIH-RVLDNGLL 614 (1057)
Q Consensus 542 l~~~V~f~g~v~~~ei~~ly~--~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~Gg~----~eii-~~~~~Gll 614 (1057)
..++|.+.+++|+.+ ++. .+ ++|| .-|-..++.||+.+|+|+|+....+= ...+ +..+.|+.
T Consensus 332 ~~~nv~~~~w~Pq~~---lL~hp~~----~~fV----tHGG~gS~~EAl~~GvP~v~~P~~~DQ~~nA~rv~e~lG~Gv~ 400 (471)
T d2vcha1 332 KKRGFVIPFWAPQAQ---VLAHPST----GGFL----THCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSEDIRAALR 400 (471)
T ss_dssp TTTEEEEESCCCHHH---HHHSTTE----EEEE----ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHTTCCEEC
T ss_pred CCCCEEECCCCCHHH---HHCCCCC----CEEE----ECCCCCHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHEEEEE
T ss_conf 678755216578999---8657657----8897----0688428999998599989714401228899999997204899
Q ss_pred ECCC-----CHHHHHHHHHHHHHCHHHHHHHHHHHHH
Q ss_conf 1999-----9999999999997199999999999989
Q 001541 615 VDPH-----DQQSVADALLKLVADKQLWARCRQNGLK 646 (1057)
Q Consensus 615 v~p~-----d~e~la~aI~~ll~d~~~~~~~~~~a~~ 646 (1057)
+... +.+++++||.+++++++ -..+++++++
T Consensus 401 l~~~~~~~~t~~~l~~ai~~vl~~~~-~~~~r~ra~~ 436 (471)
T d2vcha1 401 PRAGDDGLVRREEVARVVKGLMEGEE-GKGVRNKMKE 436 (471)
T ss_dssp CCCCTTSCCCHHHHHHHHHHHHTSTH-HHHHHHHHHH
T ss_pred EECCCCCCCCHHHHHHHHHHHHCCCH-HHHHHHHHHH
T ss_conf 72487886979999999999967947-8999999999
|
| >d2feaa1 c.108.1.20 (A:2-227) 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: MtnX-like domain: 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase MtnX species: Bacillus subtilis [TaxId: 1423]
Probab=98.57 E-value=4e-08 Score=67.84 Aligned_cols=77 Identities=8% Similarity=-0.026 Sum_probs=54.4
Q ss_pred CCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCEE
Q ss_conf 29999999999999994998454899956888877011026766089937976113433100299999987768999738
Q 001541 955 PVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSPNIV 1034 (1057)
Q Consensus 955 P~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~~~~~~ 1034 (1057)
..+..|+..++.++++++++.+++++ +||+.+ | ++|++.|+.++||++..... ......
T Consensus 141 ~~~~~k~~~~~~~~~~~~~~~~~~i~-iGDs~~-D-l~~a~~A~~~~a~~~~~~~~--~~~~~~---------------- 199 (226)
T d2feaa1 141 TCSNQCGCCKPSVIHELSEPNQYIIM-IGDSVT-D-VEAAKLSDLCFARDYLLNEC--REQNLN---------------- 199 (226)
T ss_dssp TCCSCCSSCHHHHHHHHCCTTCEEEE-EECCGG-G-HHHHHTCSEEEECHHHHHHH--HHTTCC----------------
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCEEEEECCHHHHH--HHCCCC----------------
T ss_conf 25567899999999984678863899-807631-3-99999889978706467999--982998----------------
Q ss_pred ECCCCCCHHHHHHHHHHHC
Q ss_conf 8157778589999999709
Q 001541 1035 QTPEDCTTSDIRSSLEQLG 1053 (1057)
Q Consensus 1035 ~vt~~~~~dgI~~aL~~~g 1053 (1057)
++ .--+-++|...|+++.
T Consensus 200 ~~-~~~d~~~i~~~l~~~~ 217 (226)
T d2feaa1 200 HL-PYQDFYEIRKEIENVK 217 (226)
T ss_dssp EE-CCSSHHHHHHHHHTSH
T ss_pred EE-ECCCHHHHHHHHHHHH
T ss_conf 36-2499999999999987
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=98.55 E-value=7.1e-08 Score=66.19 Aligned_cols=79 Identities=9% Similarity=0.012 Sum_probs=63.4
Q ss_pred EEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCCCC
Q ss_conf 97129999999999999994998454899956888877011026766089937976113433100299999987768999
Q 001541 952 NVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPIDSP 1031 (1057)
Q Consensus 952 dViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~~~ 1031 (1057)
++.....+|..+++.+++++|+++++++. +||+.| | ++||+.++.++||+||. .+.+.+|+
T Consensus 73 ~~~~~~~~K~~~l~~~~~~~~i~~~~v~~-vGDd~n-D-l~~l~~~g~siap~nA~--~~vk~~A~-------------- 133 (177)
T d1k1ea_ 73 LFFLGKLEKETACFDLMKQAGVTAEQTAY-IGDDSV-D-LPAFAACGTSFAVADAP--IYVKNAVD-------------- 133 (177)
T ss_dssp EEEESCSCHHHHHHHHHHHHTCCGGGEEE-EECSGG-G-HHHHHHSSEEEECTTSC--HHHHTTSS--------------
T ss_pred CCCCCCCCHHHHHHHHHHHHCCCCCEEEE-ECCCCC-H-HHHHHHCCEEEECCCCC--HHHHHHCC--------------
T ss_conf 01101363888999999986677522577-058840-7-89996689289848864--99998589--------------
Q ss_pred CEEECCCCCCHHH-HHHHHHHH
Q ss_conf 7388157778589-99999970
Q 001541 1032 NIVQTPEDCTTSD-IRSSLEQL 1052 (1057)
Q Consensus 1032 ~~~~vt~~~~~dg-I~~aL~~~ 1052 (1057)
|||....-+| |++.++++
T Consensus 134 ---~Vt~~~GG~GavrE~~e~i 152 (177)
T d1k1ea_ 134 ---HVLSTHGGKGAFREMSDMI 152 (177)
T ss_dssp ---EECSSCTTTTHHHHHHHHH
T ss_pred ---EEECCCCCCCHHHHHHHHH
T ss_conf ---9917889976399999999
|
| >d1wvia_ c.108.1.14 (A:) Putative phosphatase SMU.1415c {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: NagD-like domain: Putative phosphatase SMU.1415c species: Streptococcus mutans [TaxId: 1309]
Probab=98.54 E-value=7.1e-07 Score=59.59 Aligned_cols=197 Identities=16% Similarity=0.139 Sum_probs=98.0
Q ss_pred CEEEEEEECCCC--CCCCHHHHHHHHHHHHHHHCCCCEEEEEEC---CCCHHHHHHHHHH-CCCCCCCCCEEEECCCCEE
Q ss_conf 659999831799--974039999999999844038983899978---9998889999993-8999999986996799579
Q 001541 774 KHIFVISVDCDS--TTGLLDATKKICEAVEKERTEGSIGFILST---SMTISEIHSFLVS-GHLSPSDFDAFICNSGSDL 847 (1057)
Q Consensus 774 kkliv~DiDGTL--~~~i~~~~~~al~~l~~~~~~~gi~vvIaT---GR~~~~i~~~l~~-l~l~~~~~D~lI~~nGa~I 847 (1057)
.|.|+||+|||| ...+.+...++++.+++. |+.|+++| .|+...+.+.+.. .++.. ..+-++.+..+..
T Consensus 2 yk~vlFDlDGTL~~~~~~i~~a~e~l~~l~~~----g~~~~~~TN~s~~~~~~~~~~l~~~~~~~~-~~~~i~~~~~~~~ 76 (253)
T d1wvia_ 2 YKGYLIDLDGTIYKGKDRIPAGEDFVKRLQER----QLPYILVTNNTTRTPEMVQEMLATSFNIKT-PLETIYTATLATI 76 (253)
T ss_dssp CCEEEEECBTTTEETTEECHHHHHHHHHHHHH----TCCEEEEECCCSSCHHHHHHHHHHHHSCCC-CGGGEEEHHHHHH
T ss_pred CCEEEECCCCCEEECCCCCCCHHHHHHHHHHC----CCCEEEEECCCCCCHHHHHHHHHHHCCCCC-CCCCCCCHHHHHH
T ss_conf 69999928682088998381499999999977----997899948998999999999986067654-4333466799999
Q ss_pred EECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCHH
Q ss_conf 82457888998422421011002344623499999986210133222356653455322468626899932999993089
Q 001541 848 YYSTLNSEDGPFVVDFYYHSHIEYRWGGEGLRKTLVRWASQVTDKKAESGEKVLTPAEQLSTNYCYAFSVQKPGMTPPVK 927 (1057)
Q Consensus 848 ~~~~~~~~~~~~~~d~~~~~~i~~~w~~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 927 (1057)
.+-. ........+......+...+........ ...... +...-........
T Consensus 77 ~~l~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------~~~~~~--~~~~~~~~~~~~~ 127 (253)
T d1wvia_ 77 DYMN-----------DMKRGKTAYVIGETGLKKAVAEAGYRED----------------SENPAY--VVVGLDTNLTYEK 127 (253)
T ss_dssp HHHH-----------HHCCCSEEEEESCHHHHHHHHHTTCEEC----------------SSSCSE--EEECCCTTCBHHH
T ss_pred HHHH-----------HHCCCCEEEECCCHHHHHHHHHCCCCCC----------------CCCCCE--EEEECCCCCCHHH
T ss_conf 9998-----------7045851343266678999997297533----------------344304--8985478767888
Q ss_pred HHHHHHHHHCCCEEEEEEECCEEE---------------------EEECCCCCH--HHHHHHHHHHHCCCCCCEEEEECC
Q ss_conf 999999873590899996089159---------------------971299999--999999999949984548999568
Q 001541 928 ELRKVLRIQALRCHVIYCQNGSRI---------------------NVIPVLASR--SQALRYLYLRWGVELSKMVVFVGE 984 (1057)
Q Consensus 928 el~~~L~~~~~~~~v~~s~~~~~l---------------------dViP~gaSK--g~AL~~L~~~~gi~~~~~vaf~GD 984 (1057)
.+...+..... ..++.+.+...+ ...+...+| ...+.+.++++|++++++++ +||
T Consensus 128 ~~~~~~~~~~~-~~~i~tn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gKP~p~~~~~al~~l~i~~~~~~m-IGD 205 (253)
T d1wvia_ 128 LTLATLAIQKG-AVFIGTNPDLNIPTERGLLPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIM-VGD 205 (253)
T ss_dssp HHHHHHHHHTT-CEEEESCCCSEEEETTEEEECHHHHHHHHHHHHCCCCEECSTTSHHHHHHHHHHHTSCGGGEEE-EES
T ss_pred HHHHHHHHHHC-CCCCCCCCCCEEECCCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCEEHHHHCCCCCCCEEE-ECC
T ss_conf 87776666522-5511679996347688630467732101233333304784167742001100110345451699-827
Q ss_pred CCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 888770110267660-89937976
Q 001541 985 SGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 985 ~~d~D~ieML~~ag~-gVaMgNa~ 1007 (1057)
+-+|| +.|-..+|. +|.+..+.
T Consensus 206 s~~~D-I~gA~~aG~~si~V~~G~ 228 (253)
T d1wvia_ 206 NYLTD-ITAGIKNDIATLLVTTGF 228 (253)
T ss_dssp CTTTT-HHHHHHTTCEEEEESSSS
T ss_pred CHHHH-HHHHHHCCCCEEEECCCC
T ss_conf 80777-999998799799989899
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.47 E-value=2e-08 Score=69.81 Aligned_cols=78 Identities=13% Similarity=0.110 Sum_probs=63.5
Q ss_pred EEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 59971299999999999999949984548999568888770110267660899379761134331002999999877689
Q 001541 950 RINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGICSSSSNQIHANRSYPLSDVMPID 1029 (1057)
Q Consensus 950 ~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMgNa~~~~~~~~~a~~~~~~~d~~~~~ 1029 (1057)
..+..+.+.+|..++..++.+++++++++++ +||+.| | ++||+.+|.+||| |+. .+.+.+|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-iGDs~n-D-i~m~~~ag~~va~-na~--~~lk~~Ad------------ 194 (210)
T d1j97a_ 133 VEGEVLKENAKGEILEKIAKIEGINLEDTVA-VGDGAN-D-ISMFKKAGLKIAF-CAK--PILKEKAD------------ 194 (210)
T ss_dssp EECSSCSTTHHHHHHHHHHHHHTCCGGGEEE-EESSGG-G-HHHHHHCSEEEEE-SCC--HHHHTTCS------------
T ss_pred CCCCCCCCCCCCCHHHHHHHHHCCCCCCEEE-ECCCCC-H-HHHHHHCCCCEEE-CCC--HHHHHHCC------------
T ss_conf 3321111234541033578884666554178-637847-4-9999988987899-989--99997499------------
Q ss_pred CCCEEECCCCCCHHHHHHHHH
Q ss_conf 997388157778589999999
Q 001541 1030 SPNIVQTPEDCTTSDIRSSLE 1050 (1057)
Q Consensus 1030 ~~~~~~vt~~~~~dgI~~aL~ 1050 (1057)
+++++.+.+||.++||
T Consensus 195 -----~vi~~~d~~~vl~~lk 210 (210)
T d1j97a_ 195 -----ICIEKRDLREILKYIK 210 (210)
T ss_dssp -----EEECSSCGGGGGGGCC
T ss_pred -----EEECCCCHHHHHHHHC
T ss_conf -----9991799999999869
|
| >d1nnla_ c.108.1.4 (A:) Phosphoserine phosphatase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.17 E-value=2.8e-06 Score=55.69 Aligned_cols=47 Identities=11% Similarity=0.244 Sum_probs=38.8
Q ss_pred CCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEECCCC
Q ss_conf 9999999999999994998454899956888877011026766089937976
Q 001541 956 VLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILKGIC 1007 (1057)
Q Consensus 956 ~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMgNa~ 1007 (1057)
.+..|+..++.+....+ ++++++ +||+.+ | +.|++.++.+|||++..
T Consensus 150 ~~~~K~~~v~~~~~~~~--~~~~~~-vGDs~~-D-i~~~~~ag~~va~~~~~ 196 (217)
T d1nnla_ 150 ESGGKGKVIKLLKEKFH--FKKIIM-IGDGAT-D-MEACPPADAFIGFGGNV 196 (217)
T ss_dssp STTHHHHHHHHHHHHHC--CSCEEE-EESSHH-H-HTTTTTSSEEEEECSSC
T ss_pred CCCHHHHHHHHHHHCCC--CCCCEE-EEECHH-H-HHHHHHCCCEEEECCCH
T ss_conf 42208999999986348--666389-971786-5-99898689219979877
|
| >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: UDP-N-acetylglucosamine 2-epimerase domain: UDP-N-acetylglucosamine 2-epimerase species: Escherichia coli [TaxId: 562]
Probab=98.04 E-value=0.00036 Score=41.77 Aligned_cols=289 Identities=13% Similarity=0.109 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHCCCCCCCCEEEEECCC-CCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
Q ss_conf 9998789886635999996509998599-814899999803999799992588320479999951102677877878989
Q 001541 288 IIRMSNVLGEQIGGGKPVWPVAIHGHYA-DAGDSAALLSGALNVPMLFTGHSLGRDKLEQLLKQARLSRDEINATYKIMR 366 (1057)
Q Consensus 288 ~~~~~k~L~~~~~~~~~~~pDIIh~h~~-~~~~~a~~l~~~~~iP~V~t~H~l~~~~~~~l~~~g~~~~~~i~~~yk~~~ 366 (1057)
+..+.+.+.+ .+||+|..+.= ....+++..+..+++|+++..-+.-.... ....... ..|
T Consensus 75 i~~~~~~~~~-------~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s~~~---------~~~~pde---~~R 135 (376)
T d1f6da_ 75 LEGLKPILAE-------FKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDL---------YSPWPEE---ANR 135 (376)
T ss_dssp HHHHHHHHHH-------HCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCCSCT---------TSSTTHH---HHH
T ss_pred HHHHHHHHHH-------CCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCCCCC---------CCCCCHH---HHH
T ss_conf 9864788974-------56762243103443136899987407538998524465420---------0047406---655
Q ss_pred HHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC-CCCCCCC-CCCCCC
Q ss_conf 89999987503799994697899999954079984789999996820334458899969994999-8789867-899999
Q 001541 367 RIEAEELSLDASEIVITSTRQEIEEQWRLYDGFDPVLERKLRARIKRNVSCYGKFMPRMAIIPPG-MEFHHIV-PQDGDM 444 (1057)
Q Consensus 367 ri~~E~~~l~~ad~Vi~~S~~~~~~~~~~y~~~~~~~~~~l~~~~~~gv~~~g~~~~kv~VIpnG-iD~~~f~-~~~~~~ 444 (1057)
. .+-.-|+..+|+++...+.+... |....++.++-+. +|.-... +....
T Consensus 136 ~-----~iskls~~hf~~~~~~~~~L~~~-----------------------G~~~~~I~~vG~~~~D~l~~~~~~~~~- 186 (376)
T d1f6da_ 136 T-----LTGHLAMYHFSPTETSRQNLLRE-----------------------NVADSRIFITGNTVIDALLWVRDQVMS- 186 (376)
T ss_dssp H-----HHHHTCSEEEESSHHHHHHHHHT-----------------------TCCGGGEEECCCHHHHHHHHHHHHTTT-
T ss_pred H-----HHCCCEEEEEECCHHHHHHHHHC-----------------------CCCCCCCCEECCCHHHHHHHHHHHHHC-
T ss_conf 4-----20320048874347888687751-----------------------898653412167248788887765423-
Q ss_pred CCCCCCCCCCCCCCCCCHHHHH-HHHHCCCCCCE-EEEEECCC-CCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC
Q ss_conf 9977889999999998227998-76417999859-99984899-978999999999764013599849999950899751
Q 001541 445 DGETEGNEDNPASPDPPIWSEI-MRFFTNPRKPV-ILALARPD-PKKNITTLVKAFGECRPLRELANLTLIMGNRDGIDE 521 (1057)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-Il~vGRl~-~~Kgi~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~ 521 (1057)
......... ...+...++++ ++.+-|.. ..+++..++.++..+.... .++.++.-..+.
T Consensus 187 -------------~~~~~~~~~~~~~~~~~~~~~ilvt~H~~~~~~~~~~~i~~~l~~~~~~~--~~~~ii~p~~~~--- 248 (376)
T d1f6da_ 187 -------------SDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATTH--QDIQIVYPVHLN--- 248 (376)
T ss_dssp -------------CHHHHHHHHTTCTTCCTTSEEEEECCCCBSSCCHHHHHHHHHHHHHHHHC--TTEEEEEECCBC---
T ss_pred -------------CCHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC--CEEEEECCCCCC---
T ss_conf -------------51232111102233477776699833541111200999999986543421--404785254432---
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCC-
Q ss_conf 0010189999999999871999977839999978299999970149939997299899878999999839969983888-
Q 001541 522 MSSTSASVLLSVLKLIDKYDLYGQVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG- 600 (1057)
Q Consensus 522 ~~~~~~~~~~~i~~l~~~~~l~~~V~f~g~v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~G- 600 (1057)
......+. .......++.+.+.++..+...+++.| .+++--| |-...||...|+|+|.-..+
T Consensus 249 -----~~~~~~~~---~~~~~~~ni~~~~~l~~~~fl~ll~~a----~~vignS-----ssgi~Ea~~lg~P~Inir~~t 311 (376)
T d1f6da_ 249 -----PNVREPVN---RILGHVKNVILIDPQEYLPFVWLMNHA----WLILTDS-----GGIQEEAPSLGKPVLVMRDTT 311 (376)
T ss_dssp -----HHHHHHHH---HHHTTCTTEEEECCCCHHHHHHHHHHC----SEEEESS-----SGGGGTGGGGTCCEEECSSCC
T ss_pred -----HHHHHHHH---HHHCCCCCCEEECCCCHHHHHHHHHHC----EEEEECC-----CCHHHHHHHHCCCEEECCCCC
T ss_conf -----12444676---664044451332355678999998416----3998368-----506766787489889727876
Q ss_pred CCHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHC
Q ss_conf 810133039846991999999999999999719999999999998994-409989999999999980
Q 001541 601 GPVDIHRVLDNGLLVDPHDQQSVADALLKLVADKQLWARCRQNGLKNI-HLFSWPEHCKTYLSRIAG 666 (1057)
Q Consensus 601 g~~eii~~~~~Gllv~p~d~e~la~aI~~ll~d~~~~~~~~~~a~~~v-~~fsw~~~a~~~l~~l~~ 666 (1057)
.-++-+..+ +-+++++ |.+++.+++.+++.++..... .... .-|.-...+++..++++.
T Consensus 312 er~~~~~~g-~~i~v~~-~~~~I~~ai~~~l~~~~~~~~-----~~~~~npYGdG~as~rI~~iLk~ 371 (376)
T d1f6da_ 312 ERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDENEYQA-----MSRAHNPYGDGQACSRILEALKN 371 (376)
T ss_dssp SCHHHHHHT-SEEECCS-SHHHHHHHHHHHHHCHHHHHH-----HHHSCCTTCCSCHHHHHHHHHHH
T ss_pred CCCCCEECC-EEEECCC-CHHHHHHHHHHHHHCHHHHHH-----HCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 576412368-0698789-999999999999728576653-----04578989898499999999985
|
| >d1xpja_ c.108.1.18 (A:) Hypothetical protein VC0232 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein VC0232 domain: Hypothetical protein VC0232 species: Vibrio cholerae [TaxId: 666]
Probab=97.50 E-value=0.00023 Score=43.01 Aligned_cols=61 Identities=11% Similarity=0.168 Sum_probs=50.5
Q ss_pred EEEEEEECCCCC---------CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC---------------HHHHHHHHHHCC
Q ss_conf 599998317999---------74039999999999844038983899978999---------------888999999389
Q 001541 775 HIFVISVDCDST---------TGLLDATKKICEAVEKERTEGSIGFILSTSMT---------------ISEIHSFLVSGH 830 (1057)
Q Consensus 775 kliv~DiDGTL~---------~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~---------------~~~i~~~l~~l~ 830 (1057)
|-|+||+||||. ..+.+.+.+.++.+.++ |+.++|.|+|. ...+.+||...|
T Consensus 2 K~i~~DiDGTI~~~~~~~y~~~~P~~~~Ie~l~~l~~~----G~~Iii~TaR~~~~~~~~~~~~~~~~~~~T~~wL~~~g 77 (124)
T d1xpja_ 2 KKLIVDLDGTLTQANTSDYRNVLPRLDVIEQLREYHQL----GFEIVISTARNMRTYEGNVGKINIHTLPIITEWLDKHQ 77 (124)
T ss_dssp CEEEECSTTTTBCCCCSCGGGCCBCHHHHHHHHHHHHT----TCEEEEEECTTTTTTTTCHHHHHHHTHHHHHHHHHHTT
T ss_pred CEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999378872889999827368489999999999987----99899995687545577577878889999999999829
Q ss_pred CCCCCCCEEEEC
Q ss_conf 999999869967
Q 001541 831 LSPSDFDAFICN 842 (1057)
Q Consensus 831 l~~~~~D~lI~~ 842 (1057)
++ +|-++.+
T Consensus 78 I~---Yd~Li~g 86 (124)
T d1xpja_ 78 VP---YDEILVG 86 (124)
T ss_dssp CC---CSEEEEC
T ss_pred CC---CEEEEEC
T ss_conf 98---2388879
|
| >d2b8ea1 c.108.1.7 (A:416-434,A:548-663) Cation-transporting ATPase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Cation-transporting ATPase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=97.23 E-value=0.0035 Score=35.26 Aligned_cols=53 Identities=11% Similarity=0.064 Sum_probs=46.2
Q ss_pred EEEEEEECCCCC----CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 599998317999----740399999999998440389838999789998889999993899
Q 001541 775 HIFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 775 kliv~DiDGTL~----~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l 831 (1057)
..++||.+|+++ ..+.+..+++++.|++. |+.+.+.||-....+..+.+.+|+
T Consensus 4 ~~~~~d~~~~~~~g~~D~lr~~a~~~I~~L~~~----Gi~v~ilTGD~~~~a~~ia~~lgI 60 (135)
T d2b8ea1 4 TAVIFDKTGTLTKGKPDTLKESAKPAVQELKRM----GIKVGMITGDNWRSAEAISRELNL 60 (135)
T ss_dssp CEEEEECCCCCBCSCCCCBCTTHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTC
T ss_pred EEEEECCCEEEEEECCCCCCCCHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHHHH
T ss_conf 999998914799736889981199999999985----997999758633555677765422
|
| >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: Polynucleotide kinase, phosphatase domain species: Bacteriophage T4 [TaxId: 10665]
Probab=97.07 E-value=0.00048 Score=40.96 Aligned_cols=45 Identities=4% Similarity=0.032 Sum_probs=37.7
Q ss_pred CCCCEEEEEEECCCCC---------------CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCH
Q ss_conf 6766599998317999---------------740399999999998440389838999789998
Q 001541 771 RRRKHIFVISVDCDST---------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTI 819 (1057)
Q Consensus 771 ~~~kkliv~DiDGTL~---------------~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~ 819 (1057)
+.+.|.++||+||||. ..+-+.+.++++.++++ |..++++|||+-
T Consensus 4 ~~kpk~vifDiDgTL~~~~~~~~~~~~~~~~~~~~p~v~~~l~~l~~~----G~~Iii~T~R~~ 63 (149)
T d1ltqa1 4 PGKPKAVIFDVDGTLAKMNGRGPYDLEKCDTDVINPMVVELSKMYALM----GYQIVVVSGRES 63 (149)
T ss_dssp TTSCEEEEEETBTTTBCCSSCCTTCGGGGGGCCBCHHHHHHHHHHHHT----TCEEEEEECSCC
T ss_pred CCCCCEEEEECCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCH
T ss_conf 999968999748883827898757733304084487899999999844----480899926857
|
| >d2obba1 c.108.1.25 (A:1-122) Hypothetical protein BT0820 {Bacteroides thetaiotaomicron [TaxId: 818]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: BT0820-like domain: Hypothetical protein BT0820 species: Bacteroides thetaiotaomicron [TaxId: 818]
Probab=97.05 E-value=0.00058 Score=40.40 Aligned_cols=68 Identities=12% Similarity=0.009 Sum_probs=50.5
Q ss_pred EEEEEECCCCC-------CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHH---HHHHHHHHCCCCCCCCCEEEECCCC
Q ss_conf 99998317999-------7403999999999984403898389997899988---8999999389999999869967995
Q 001541 776 IFVISVDCDST-------TGLLDATKKICEAVEKERTEGSIGFILSTSMTIS---EIHSFLVSGHLSPSDFDAFICNSGS 845 (1057)
Q Consensus 776 liv~DiDGTL~-------~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~---~i~~~l~~l~l~~~~~D~lI~~nGa 845 (1057)
.+++|+||||. ..+.+...+.|+++.++ |+.++|.|+|+-. ....||...+++ +|.+.-...-
T Consensus 2 ti~vDiDGTl~~~~~~~~~kPi~~~Ie~l~~L~~~----G~~IIi~TaR~~~~~~~t~~wL~~~~i~---yd~i~~~~~~ 74 (122)
T d2obba1 2 TIAVDFDGTIVEHRYPRIGEEIPFAVETLKLLQQE----KHRLILWSVREGELLDEAIEWCRARGLE---FYAANKDYPE 74 (122)
T ss_dssp EEEECCBTTTBCSCTTSCCCBCTTHHHHHHHHHHT----TCEEEECCSCCHHHHHHHHHHHHTTTCC---CSEESSSSTT
T ss_pred EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC----CCEEEEEECCCCCCHHHHHHHHHHCCCC---CEEHHCCCCC
T ss_conf 89997579708899976366459999999999987----9969999358886538899999981998---3450105766
Q ss_pred EEEEC
Q ss_conf 79824
Q 001541 846 DLYYS 850 (1057)
Q Consensus 846 ~I~~~ 850 (1057)
-+.+.
T Consensus 75 ~~~~~ 79 (122)
T d2obba1 75 EERDH 79 (122)
T ss_dssp C---C
T ss_pred CCCCC
T ss_conf 86644
|
| >d1wpga2 c.108.1.7 (A:344-360,A:600-750) Calcium ATPase, catalytic domain P {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Meta-cation ATPase, catalytic domain P domain: Calcium ATPase, catalytic domain P species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]
Probab=96.99 E-value=0.0016 Score=37.42 Aligned_cols=53 Identities=8% Similarity=-0.082 Sum_probs=45.7
Q ss_pred EEEEEECCCCC----CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 99998317999----7403999999999984403898389997899988899999938999
Q 001541 776 IFVISVDCDST----TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 776 liv~DiDGTL~----~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~ 832 (1057)
++.+|.+||++ ..+-+.++++++.+++. |+.+.+.||=+...+..+.+++|+.
T Consensus 4 ~~~~d~~~~~~~~~~Dp~R~~~~~~I~~l~~~----GI~v~miTGD~~~tA~~ia~~~Gi~ 60 (168)
T d1wpga2 4 VICSDKTGTLTTNQLDPPRKEVMGSIQLCRDA----GIRVIMITGDNKGTAIAICRRIGIF 60 (168)
T ss_dssp EEEECCTTTTBCCCECCBCTTHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHTTSS
T ss_pred EEEECCCCEEEEEECCCCCHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCC
T ss_conf 99978851788873488965399999999988----4989998999979999999984998
|
| >d2fpwa1 c.108.1.19 (A:3-163) Histidine biosynthesis bifunctional protein HisB, phosphatase domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Histidine biosynthesis bifunctional protein HisB, phosphatase domain species: Escherichia coli [TaxId: 562]
Probab=96.43 E-value=0.0034 Score=35.36 Aligned_cols=42 Identities=10% Similarity=0.070 Sum_probs=32.3
Q ss_pred CCEEEEEEECCCCC--------------CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCC
Q ss_conf 66599998317999--------------74039999999999844038983899978999
Q 001541 773 RKHIFVISVDCDST--------------TGLLDATKKICEAVEKERTEGSIGFILSTSMT 818 (1057)
Q Consensus 773 ~kkliv~DiDGTL~--------------~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~ 818 (1057)
.+|++|||.||||. -.+.+.+.++|+.|+++ |+.++++|..+
T Consensus 1 ~~K~i~~D~DGtL~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~----g~~l~i~TNq~ 56 (161)
T d2fpwa1 1 SQKYLFIDRDGTLISEPPSDFQVDRFDKLAFEPGVIPQLLKLQKA----GYKLVMITNQD 56 (161)
T ss_dssp CCEEEEECCBTTTBCCC--CCCCCSGGGCCBCTTHHHHHHHHHHT----TEEEEEEEECT
T ss_pred CCCEEEEECCCCEEEECCCCCCCCCHHHCEECCCHHHHHHHHHHC----CCCEEEECCCC
T ss_conf 981999918897673579887428889906875599999999873----87301104643
|
| >d2hcfa1 c.108.1.6 (A:2-229) Hypothetical protein CT1708 {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein CT1708 species: Chlorobium tepidum [TaxId: 1097]
Probab=96.42 E-value=0.0049 Score=34.29 Aligned_cols=44 Identities=14% Similarity=0.138 Sum_probs=29.5
Q ss_pred HHHHHHHHHHH--CCCCCCEEEEECCCCCCCCCCCCCCCCEE-EEE--CCCC
Q ss_conf 99999999994--99845489995688887701102676608-993--7976
Q 001541 961 SQALRYLYLRW--GVELSKMVVFVGESGDTDYEGLLGGVHKT-VIL--KGIC 1007 (1057)
Q Consensus 961 g~AL~~L~~~~--gi~~~~~vaf~GD~~d~D~ieML~~ag~g-VaM--gNa~ 1007 (1057)
..++..+.... ++++++++. +||+.. | +.+=..+|.. |++ |+..
T Consensus 152 ~~~~~~~~~~~~~~~~p~~~l~-VGD~~~-D-i~aA~~aG~~~i~v~~g~~~ 200 (228)
T d2hcfa1 152 HIALERARRMTGANYSPSQIVI-IGDTEH-D-IRCARELDARSIAVATGNFT 200 (228)
T ss_dssp HHHHHHHHHHHCCCCCGGGEEE-EESSHH-H-HHHHHTTTCEEEEECCSSSC
T ss_pred HHHHHHHHHHCCCCCCHHHHEE-ECCCHH-H-HHHHHHCCCEEEEECCCCCC
T ss_conf 7788876530024877668023-248727-8-99999849979998079999
|
| >d1pswa_ c.87.1.7 (A:) ADP-heptose LPS heptosyltransferase II {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: ADP-heptose LPS heptosyltransferase II domain: ADP-heptose LPS heptosyltransferase II species: Escherichia coli [TaxId: 562]
Probab=95.96 E-value=0.036 Score=28.57 Aligned_cols=112 Identities=13% Similarity=0.062 Sum_probs=63.7
Q ss_pred HHCCCCCCEEE-EEE-CCCCCCC--HHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 41799985999-984-8999789--9999999976401359984999995089975100101899999999998719999
Q 001541 469 FFTNPRKPVIL-ALA-RPDPKKN--ITTLVKAFGECRPLRELANLTLIMGNRDGIDEMSSTSASVLLSVLKLIDKYDLYG 544 (1057)
Q Consensus 469 ~~~~~~~~~Il-~vG-Rl~~~Kg--i~~Ll~A~~~l~~~~~~~~l~LIvG~~~~~~~~~~~~~~~~~~i~~l~~~~~l~~ 544 (1057)
+....+++.|+ ..| +..+.|. .+...+....+.+ ....+ +++|+..+. +....+...........
T Consensus 174 ~~~~~~~~~i~~~~~~~~~~~k~wp~~~~~~L~~~l~~--~~~~i-vl~g~~~e~--------~~~~~~~~~~~~~~~~~ 242 (348)
T d1pswa_ 174 FSLSSERPMIGFCPGAEFGPAKRWPHYHYAELAKQLID--EGYQV-VLFGSAKDH--------EAGNEILAALNTEQQAW 242 (348)
T ss_dssp TTCCSSSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHH--TTCEE-EECCCGGGH--------HHHHHHHTTSCHHHHTT
T ss_pred HCCCCCCCEEEECCCCCHHHCCCCCHHHHHHHHHHHHH--CCCCC-CCCCCCCHH--------HHHHHHHHHHHCCCCCC
T ss_conf 33355787699535532232216446777666777764--48742-224441059--------99888887631014653
Q ss_pred CEEECCCCCCCCHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHCCCCEEECCCC
Q ss_conf 77839999978299999970149939997299899878999999839969983888
Q 001541 545 QVAYPKHHKQSDVPEIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPIVATKNG 600 (1057)
Q Consensus 545 ~V~f~g~v~~~ei~~ly~~Aa~~~dv~i~ps~~Egfgl~llEAmA~G~PVIat~~G 600 (1057)
.+.+.|..+..++..++..| +++|-+. +-.+--|.|+|+|+|+-..+
T Consensus 243 ~~~l~g~~sl~el~~li~~a----~l~I~~D-----tg~~HlAaa~g~p~i~lfg~ 289 (348)
T d1pswa_ 243 CRNLAGETQLDQAVILIAAC----KAIVTND-----SGLMHVAAALNRPLVALYGP 289 (348)
T ss_dssp EEECTTTSCHHHHHHHHHTS----SEEEEES-----SHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCCCCCHHHHHHHHHCC----EEEEECC-----CCHHHHHHHCCCCEEEEECC
T ss_conf 33555774378899987433----0576158-----60889999829998999789
|
| >d2hsza1 c.108.1.6 (A:1-224) Phosphoglycolate phosphatase Gph {Haemophilus somnus [TaxId: 731]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase Gph species: Haemophilus somnus [TaxId: 731]
Probab=95.82 E-value=0.011 Score=32.08 Aligned_cols=51 Identities=20% Similarity=0.228 Sum_probs=39.7
Q ss_pred ECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 1299999999999999949984548999568888770110267660-89937976
Q 001541 954 IPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 954 iP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~-gVaMgNa~ 1007 (1057)
.+..-+|......++.+++++.++++. +||+.. | +.+-..+|. +|.+..+.
T Consensus 147 ~~~~kp~p~~~~~~~~~~~~~~~~~~~-igD~~~-D-i~~A~~aG~~~i~v~~g~ 198 (224)
T d2hsza1 147 LPEIKPHPAPFYYLCGKFGLYPKQILF-VGDSQN-D-IFAAHSAGCAVVGLTYGY 198 (224)
T ss_dssp SSSCTTSSHHHHHHHHHHTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEEESSSC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHCCCH-HCCCHH-H-HHHHHHCCCEEEEEECCC
T ss_conf 454432101357899886431100202-117698-9-999999099599991799
|
| >d1te2a_ c.108.1.6 (A:) Phosphatase YniC {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphatase YniC species: Escherichia coli [TaxId: 562]
Probab=95.81 E-value=0.015 Score=31.14 Aligned_cols=41 Identities=15% Similarity=0.046 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf 99999999999499845489995688887701102676608993
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 960 Kg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaM 1003 (1057)
+...+...++++|++++++++ +||+.+ | +.+-+.+|...+.
T Consensus 146 ~~~~~~~~~~~l~~~~~~~l~-igD~~~-d-i~aA~~~G~~~i~ 186 (218)
T d1te2a_ 146 HPQVYLDCAAKLGVDPLTCVA-LEDSVN-G-MIASKAARMRSIV 186 (218)
T ss_dssp STHHHHHHHHHHTSCGGGEEE-EESSHH-H-HHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHCCCCCHHCEE-EEECHH-H-HHHHHHCCCEEEE
T ss_conf 578999999972999513089-960989-9-9999983997999
|
| >d1u7pa_ c.108.1.17 (A:) Magnesium-dependent phosphatase-1, Mdp1 {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Magnesium-dependent phosphatase-1, Mdp1 domain: Magnesium-dependent phosphatase-1, Mdp1 species: Mouse (Mus musculus) [TaxId: 10090]
Probab=95.57 E-value=0.0093 Score=32.45 Aligned_cols=42 Identities=24% Similarity=0.264 Sum_probs=34.6
Q ss_pred CCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEE
Q ss_conf 999999999999949984548999568888770110267660899
Q 001541 958 ASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVI 1002 (1057)
Q Consensus 958 aSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVa 1002 (1057)
-.|...+..+++++|+++++++. +||+.. | +..-+.+|...+
T Consensus 98 kp~~~~~~~~~~~~~~~~~~~l~-igD~~~-d-i~aA~~aG~~~i 139 (164)
T d1u7pa_ 98 GSKVTHFERLHHKTGVPFSQMVF-FDDENR-N-IIDVGRLGVTCI 139 (164)
T ss_dssp SCHHHHHHHHHHHHCCCGGGEEE-EESCHH-H-HHHHHTTTCEEE
T ss_pred CCCHHHHHHHHHHHCCCHHHEEE-ECCCHH-H-HHHHHHCCCEEE
T ss_conf 89769999999996888699798-748787-8-999998699799
|
| >d1qyia_ c.108.1.13 (A:) Hypothetical protein MW1667 (SA1546) {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Hypothetical protein MW1667 (SA1546) domain: Hypothetical protein MW1667 (SA1546) species: Staphylococcus aureus [TaxId: 1280]
Probab=95.47 E-value=0.0081 Score=32.86 Aligned_cols=40 Identities=13% Similarity=0.060 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCC
Q ss_conf 03999999999984403898389997899988899999938999
Q 001541 789 LLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHLS 832 (1057)
Q Consensus 789 i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l~ 832 (1057)
+.+.++++|+.+++. |+.++++||++...+..+++.+|+.
T Consensus 216 p~~~v~~~l~~lk~a----Gi~v~i~Tg~~~~~a~~il~~lgl~ 255 (380)
T d1qyia_ 216 PVDEVKVLLNDLKGA----GFELGIATGRPYTETVVPFENLGLL 255 (380)
T ss_dssp CHHHHHHHHHHHHHT----TCEEEEECSSCHHHHHHHHHHHTCG
T ss_pred CHHHHHHHHHHHHHC----CCEEEEECCCCHHHHHHHHHHCCCC
T ss_conf 436399999999987----9959998899799999999981995
|
| >d2o2xa1 c.108.1.19 (A:8-216) Hypothetical protein Mll2559 {Mesorhizobium loti [TaxId: 381]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: Hypothetical protein Mll2559 species: Mesorhizobium loti [TaxId: 381]
Probab=95.26 E-value=0.016 Score=30.92 Aligned_cols=44 Identities=16% Similarity=-0.008 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCC
Q ss_conf 999999999949984548999568888770110267660-89937976
Q 001541 961 SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGIC 1007 (1057)
Q Consensus 961 g~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~-gVaMgNa~ 1007 (1057)
...+...++++++++++++. +||+-. | +.+=..+|. ++++.+..
T Consensus 132 p~ml~~a~~~~~i~~~~~~~-VGD~~~-D-i~aA~~AGi~~i~v~~g~ 176 (209)
T d2o2xa1 132 PGMLVEAGKRLALDLQRSLI-VGDKLA-D-MQAGKRAGLAQGWLVDGE 176 (209)
T ss_dssp CHHHHHHHHHHTCCGGGCEE-EESSHH-H-HHHHHHTTCSEEEEETCC
T ss_pred CHHHHHHHHHHCCCCCCEEE-ECCCHH-H-HHHHHHCCCCEEEEECCC
T ss_conf 01566767773899412689-579788-9-999998799489994899
|
| >d2gmwa1 c.108.1.19 (A:24-205) D,D-heptose 1,7-bisphosphate phosphatase GmhB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Histidinol phosphatase-like domain: D,D-heptose 1,7-bisphosphate phosphatase GmhB species: Escherichia coli [TaxId: 562]
Probab=94.98 E-value=0.034 Score=28.75 Aligned_cols=43 Identities=14% Similarity=0.062 Sum_probs=31.3
Q ss_pred HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-E-EEECCCC
Q ss_conf 99999999949984548999568888770110267660-8-9937976
Q 001541 962 QALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-T-VILKGIC 1007 (1057)
Q Consensus 962 ~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~-g-VaMgNa~ 1007 (1057)
.-+...+++|++++++++. +||+.. | +.+=..+|. + +.+.++.
T Consensus 112 ~m~~~~~~~~~i~~~~s~m-VGDs~~-D-i~aA~~Ag~~~~~lv~~g~ 156 (182)
T d2gmwa1 112 GMLLSARDYLHIDMAASYM-VGDKLE-D-MQAAVAANVGTKVLVRTGK 156 (182)
T ss_dssp HHHHHHHHHHTBCGGGCEE-EESSHH-H-HHHHHHTTCSEEEEESSSS
T ss_pred CCCCCHHHHCCCCCCCCCC-CCCCHH-H-HHHHHHHCCCCEEEECCCC
T ss_conf 2231012211655344512-279899-9-9999982888479989997
|
| >d1cr6a1 c.108.1.2 (A:4-225) Epoxide hydrolase, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: YihX-like domain: Epoxide hydrolase, N-terminal domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=94.68 E-value=0.054 Score=27.43 Aligned_cols=49 Identities=12% Similarity=0.179 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECCCCHHHH
Q ss_conf 9999999999949984548999568888770110267660-899379761134
Q 001541 960 RSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKGICSSSS 1011 (1057)
Q Consensus 960 Kg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~-gVaMgNa~~~~~ 1011 (1057)
........++++|+++++++. +||+.. | +.+=+.+|. +|.+.+.....+
T Consensus 159 ~p~~~~~~~~~~~v~p~~~l~-IgD~~~-D-i~~A~~aG~~ti~V~~~~~~~~ 208 (222)
T d1cr6a1 159 EPQIYNFLLDTLKAKPNEVVF-LDDFGS-N-LKPARDMGMVTILVHNTASALR 208 (222)
T ss_dssp CHHHHHHHHHHHTSCTTSEEE-EESSST-T-THHHHHHTCEEEECCSSSHHHH
T ss_pred CHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCCEEEEECCCCHHHH
T ss_conf 827777888872898632899-977988-7-9999985998999899404899
|
| >d1k1ea_ c.108.1.5 (A:) Probable phosphatase YrbI {Haemophilus influenzae, HI1679 [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Probable phosphatase YrbI domain: Probable phosphatase YrbI species: Haemophilus influenzae, HI1679 [TaxId: 727]
Probab=94.39 E-value=0.04 Score=28.29 Aligned_cols=55 Identities=7% Similarity=-0.030 Sum_probs=43.7
Q ss_pred CCEEEEEEECCCCC-------------CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCC
Q ss_conf 66599998317999-------------740399999999998440389838999789998889999993899
Q 001541 773 RKHIFVISVDCDST-------------TGLLDATKKICEAVEKERTEGSIGFILSTSMTISEIHSFLVSGHL 831 (1057)
Q Consensus 773 ~kkliv~DiDGTL~-------------~~i~~~~~~al~~l~~~~~~~gi~vvIaTGR~~~~i~~~l~~l~l 831 (1057)
.-|+++||+||+|| ......--.+++.+++. ++.+++.||+....+...+..+++
T Consensus 4 ~ik~~i~DvDGVlTDG~v~~~~dG~e~k~F~~~Dg~gi~~l~~~----gi~~~iis~~~~~~v~~~~~~l~~ 71 (177)
T d1k1ea_ 4 NIKFVITDVDGVLTDGQLHYDANGEAIKSFHVRDGLGIKMLMDA----DIQVAVLSGRDSPILRRRIADLGI 71 (177)
T ss_dssp GCCEEEEECTTTTSCSEEEEETTEEEEEEEEHHHHHHHHHHHHT----TCEEEEEESCCCHHHHHHHHHHTC
T ss_pred CCEEEEECCCCCCCCCEEEEECCCCEEEEEECCCHHHHHHHHHH----CEEEEEECCCCHHHHHHHHHHHCC
T ss_conf 37199981677506886999389979999977604888787652----178999669844678998763212
|
| >d2go7a1 c.108.1.6 (A:3-206) Hypothetical protein SP2064 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Hypothetical protein SP2064 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.98 E-value=0.12 Score=25.03 Aligned_cols=45 Identities=11% Similarity=0.138 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEE-EEECCC
Q ss_conf 999999999999499845489995688887701102676608-993797
Q 001541 959 SRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKT-VILKGI 1006 (1057)
Q Consensus 959 SKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~g-VaMgNa 1006 (1057)
.+...++++++++|+++++++. +||+.. | +.+-..+|.. |.+.+.
T Consensus 138 p~~~~~~~~~~~~~~~p~~~l~-VgD~~~-D-i~~A~~~G~~~i~v~~~ 183 (204)
T d2go7a1 138 PSPEAATYLLDKYQLNSDNTYY-IGDRTL-D-VEFAQNSGIQSINFLES 183 (204)
T ss_dssp TSSHHHHHHHHHHTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEESSCC
T ss_pred HHHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCCEEEEECCC
T ss_conf 2578889999982999751899-947989-9-99999869969998479
|
| >d2bdua1 c.108.1.21 (A:7-297) Cytosolic 5'-nucleotidase III {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Pyrimidine 5'-nucleotidase (UMPH-1) domain: Cytosolic 5'-nucleotidase III species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.97 E-value=0.02 Score=30.28 Aligned_cols=41 Identities=15% Similarity=0.167 Sum_probs=30.4
Q ss_pred CCCCCHHHHHHHHHHHHCC--CCCCEEEEECCCCCCCCCCCCCCCC
Q ss_conf 2999999999999999499--8454899956888877011026766
Q 001541 955 PVLASRSQALRYLYLRWGV--ELSKMVVFVGESGDTDYEGLLGGVH 998 (1057)
Q Consensus 955 P~gaSKg~AL~~L~~~~gi--~~~~~vaf~GD~~d~D~ieML~~ag 998 (1057)
+-..+|+..+.....++.. +.+++++ +||+-+ | +.|..++.
T Consensus 202 i~~~~K~~~~~~~~~~~~~~~~~~~vI~-iGDs~~-D-l~Ma~g~~ 244 (291)
T d2bdua1 202 IHVFNKHDGALKNTDYFSQLKDNSNIIL-LGDSQG-D-LRMADGVA 244 (291)
T ss_dssp CCTTCHHHHHHTTHHHHHHTTTCCEEEE-EESSSG-G-GGTTTTCS
T ss_pred CCCCCCCCHHHHHHHHHHCCCCCCCEEE-EECCHH-H-HHHHHCCC
T ss_conf 4345686315445998853278676899-967776-8-99983885
|
| >d1yj5a1 c.108.1.9 (A:144-338) 5' polynucleotide kinase-3' phosphatase, middle domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: phosphatase domain of polynucleotide kinase domain: 5' polynucleotide kinase-3' phosphatase, middle domain species: Mouse (Mus musculus) [TaxId: 10090]
Probab=93.54 E-value=0.026 Score=29.47 Aligned_cols=68 Identities=10% Similarity=0.183 Sum_probs=46.1
Q ss_pred CCCCCCEEEEEEECCCCC------------C--C-CHHHHHHHHHHHHHHHCCCCEEEEEECCC--------CHHHH---
Q ss_conf 546766599998317999------------7--4-03999999999984403898389997899--------98889---
Q 001541 769 ALRRRKHIFVISVDCDST------------T--G-LLDATKKICEAVEKERTEGSIGFILSTSM--------TISEI--- 822 (1057)
Q Consensus 769 ~~~~~kkliv~DiDGTL~------------~--~-i~~~~~~al~~l~~~~~~~gi~vvIaTGR--------~~~~i--- 822 (1057)
.++.++|+++||.||||. . . +.+.+.++|+.|.++ |..++|.|-- +...+
T Consensus 16 ~~~~~~Kia~fDrDGtLik~~~~~~~~~~~~d~~~l~~~v~~~i~~L~~~----gy~iiIvTNQ~gI~rg~~s~~~~~~~ 91 (195)
T d1yj5a1 16 GVKPQGKVAAFDLDGTLITTRSGKVFPTSPSDWRILYPEIPKKLQELAAE----GYKLVIFTNQMGIGRGKLPAEVFKGK 91 (195)
T ss_dssp TCCCCSCEEEECSBTTTEECSSSCSSCSSTTCCEESCTTHHHHHHHHHHH----TCEEEEEEECHHHHHTSSCHHHHHHH
T ss_pred CCCCCCCEEEEECCCCEEEECCCCCCCCCHHHCEECCCCHHHHHHHHHHC----CCEEEEECCCCHHCCCCCCHHHHHHH
T ss_conf 98876808999789951754899867898466345167799999999867----84799952763010487699999999
Q ss_pred -HHHHHHCCCCCCCCCEEEECC
Q ss_conf -999993899999998699679
Q 001541 823 -HSFLVSGHLSPSDFDAFICNS 843 (1057)
Q Consensus 823 -~~~l~~l~l~~~~~D~lI~~n 843 (1057)
..++++++.+ .+.++|.+
T Consensus 92 ~~~i~~~l~~~---~~i~~~~~ 110 (195)
T d1yj5a1 92 VEAVLEKLGVP---FQVLVATH 110 (195)
T ss_dssp HHHHHHHHTSC---CEEEEECS
T ss_pred HHHHHHHCCCC---CCEEEECC
T ss_conf 99999986998---64898157
|
| >d2fi1a1 c.108.1.3 (A:4-190) Putative hydrolase SP0805 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphonoacetaldehyde hydrolase-like domain: Putative hydrolase SP0805 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.21 E-value=0.064 Score=26.93 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=31.0
Q ss_pred CCCH--HHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 9999--99999999994998454899956888877011026766089937
Q 001541 957 LASR--SQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 957 gaSK--g~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMg 1004 (1057)
+.+| ....+..+++++++ +++. +||+.. | +.+=+.+|...+.=
T Consensus 131 ~~~KP~p~~~~~~~~~~~~~--~~l~-vgDs~~-D-i~aA~~aG~~~i~v 175 (187)
T d2fi1a1 131 FKRKPNPESMLYLREKYQIS--SGLV-IGDRPI-D-IEAGQAAGLDTHLF 175 (187)
T ss_dssp CCCTTSCHHHHHHHHHTTCS--SEEE-EESSHH-H-HHHHHHTTCEEEEC
T ss_pred CCCCCCHHHHHHHHHHCCCC--CEEE-EECCHH-H-HHHHHHCCCEEEEE
T ss_conf 45688899999999984999--7699-907999-9-99999859979999
|
| >d2ah5a1 c.108.1.6 (A:1-210) predicted phosphatase SP0104 {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: predicted phosphatase SP0104 species: Streptococcus pneumoniae [TaxId: 1313]
Probab=93.10 E-value=0.18 Score=23.95 Aligned_cols=73 Identities=4% Similarity=0.012 Sum_probs=48.8
Q ss_pred HHHHHHHHHHCCCEEEEEEECCEEEEEECCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCE-EEEECC
Q ss_conf 9999999873590899996089159971299999999999999949984548999568888770110267660-899379
Q 001541 927 KELRKVLRIQALRCHVIYCQNGSRINVIPVLASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHK-TVILKG 1005 (1057)
Q Consensus 927 ~el~~~L~~~~~~~~v~~s~~~~~ldViP~gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~-gVaMgN 1005 (1057)
..++..+...++...+ . ..+..-+.+-.|...+.++++++|+++++++. +||+.+ | +.+-..+|. +|.+..
T Consensus 111 ~~~~~~l~~~gl~~~f----d-~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~v~-VGDs~~-D-i~aa~~aGi~~i~v~~ 182 (210)
T d2ah5a1 111 STAQDMAKNLEIHHFF----D-GIYGSSPEAPHKADVIHQALQTHQLAPEQAII-IGDTKF-D-MLGARETGIQKLAITW 182 (210)
T ss_dssp HHHHHHHHHTTCGGGC----S-EEEEECSSCCSHHHHHHHHHHHTTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEEESS
T ss_pred HHHHHHHHHHCCCCCC----C-CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEE-ECCCHH-H-HHHHHHCCCEEEEECC
T ss_conf 0115778750123320----0-00222322222333211012332012001646-547778-9-9999985993999857
Q ss_pred CC
Q ss_conf 76
Q 001541 1006 IC 1007 (1057)
Q Consensus 1006 a~ 1007 (1057)
+.
T Consensus 183 g~ 184 (210)
T d2ah5a1 183 GF 184 (210)
T ss_dssp SS
T ss_pred CC
T ss_conf 98
|
| >d1j97a_ c.108.1.4 (A:) Phosphoserine phosphatase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: Phosphoserine phosphatase domain: Phosphoserine phosphatase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.00 E-value=0.075 Score=26.50 Aligned_cols=15 Identities=13% Similarity=0.425 Sum_probs=12.0
Q ss_pred CCCEEEEEEECCCCC
Q ss_conf 766599998317999
Q 001541 772 RRKHIFVISVDCDST 786 (1057)
Q Consensus 772 ~~kkliv~DiDGTL~ 786 (1057)
+++|+++||+||||.
T Consensus 2 ~kkKlv~FDlDGTL~ 16 (210)
T d1j97a_ 2 KKKKLILFDFDSTLV 16 (210)
T ss_dssp CCCCEEEECCCCCCB
T ss_pred CCCEEEEEECCCCCC
T ss_conf 987599996887717
|
| >d2hdoa1 c.108.1.6 (A:1-207) Phosphoglycolate phosphatase {Lactobacillus plantarum [TaxId: 1590]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: beta-Phosphoglucomutase-like domain: Phosphoglycolate phosphatase species: Lactobacillus plantarum [TaxId: 1590]
Probab=91.72 E-value=0.054 Score=27.43 Aligned_cols=44 Identities=16% Similarity=0.090 Sum_probs=35.5
Q ss_pred CCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEE
Q ss_conf 99999999999999499845489995688887701102676608993
Q 001541 957 LASRSQALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVIL 1003 (1057)
Q Consensus 957 gaSKg~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaM 1003 (1057)
+-.+...+..+++++|+++++++. +||+.. | +.+=..+|...++
T Consensus 136 ~KP~p~~~~~~~~~~~~~~~~~l~-VgDs~~-D-i~~a~~aG~~~i~ 179 (207)
T d2hdoa1 136 RKPDPLPLLTALEKVNVAPQNALF-IGDSVS-D-EQTAQAANVDFGL 179 (207)
T ss_dssp CTTSSHHHHHHHHHTTCCGGGEEE-EESSHH-H-HHHHHHHTCEEEE
T ss_pred CHHHHHHHCCCCCCEEEECCCEEE-ECCCHH-H-HHHHHHCCCEEEE
T ss_conf 103444300234210451134068-547787-8-9999984992999
|
| >d1zrna_ c.108.1.1 (A:) L-2-Haloacid dehalogenase, HAD {Pseudomonas sp., strain YL [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: HAD-like superfamily: HAD-like family: HAD-related domain: L-2-Haloacid dehalogenase, HAD species: Pseudomonas sp., strain YL [TaxId: 306]
Probab=83.50 E-value=0.87 Score=19.47 Aligned_cols=46 Identities=11% Similarity=-0.010 Sum_probs=34.8
Q ss_pred CCCCHH--HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCEEEEEC
Q ss_conf 999999--9999999994998454899956888877011026766089937
Q 001541 956 VLASRS--QALRYLYLRWGVELSKMVVFVGESGDTDYEGLLGGVHKTVILK 1004 (1057)
Q Consensus 956 ~gaSKg--~AL~~L~~~~gi~~~~~vaf~GD~~d~D~ieML~~ag~gVaMg 1004 (1057)
.+..|- ...++.++++|+++++++. +||+.. | +..=+.+|...+.-
T Consensus 145 ~~~~KP~p~~~~~~~~~~g~~p~e~l~-VgD~~~-D-i~~A~~aG~~~v~v 192 (220)
T d1zrna_ 145 VQVYKPDNRVYELAEQALGLDRSAILF-VASNAW-D-ATGARYFGFPTCWI 192 (220)
T ss_dssp GTCCTTSHHHHHHHHHHHTSCGGGEEE-EESCHH-H-HHHHHHHTCCEEEE
T ss_pred EECCCCHHHHHHHHHHHHCCCCCEEEE-EECCHH-H-HHHHHHCCCEEEEE
T ss_conf 001450778899999981778714899-804837-6-99999869979998
|