Citrus Sinensis ID: 001550

Local Sequence Feature Prediction

Prediction and (Method)	Result

Residue Number Marker

Protein Sequence

Secondary Structure (PSIPRED)

Secondary Structure Prediction (SSPRO)

Coil and Loop (DISEMBL)

Flexible Loop (DISEMBL)

Low Complexity Region (SEG)

Disordered region (IsUnstruct)

Disordered Region (DISOPRED)

Disordered Region (DISEMBL)

Disordered Region (DISPRO)

Transmembrane Helix (TMHMM)

Transmembrane Helix (HMMTOP)

Transmembrane Helix (MEMSAT)

TM Helix, Signal Peptide (MEMSAT_SVM)

TM Helix, Signal Peptide (Phobius)

Signal Peptide (SignalP HMM Mode)

Signal Peptide (SignalP NN Mode)

Coiled Coils (COILS)

Positional Conservation

--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------1050-----

MESDENGVFDHSTGTPAENIEALDNMAEGNQLSTLVEWLNEMIPHIHLPFEASEEKLRACLVDGTVLCLVLNKLSPDSVEMGANFEPGPANVKRFLAAMDDMGLPRFELSDLEQGNMAPVLQCLRSLRASFSFCDEEDTIQDHYRKRWNVSRLDKFPATEQEERQCNSLDRKFQHSLHSTATSEESALMHHLAHTFHDVLHLKEGGYTDVSDVKILEFVNSSCMDNASTKSLFNIVNRILDECVERKNGDAPHRVACLLRKVVPLIERRTATQYQNFKNQNNLFRAREEKYKSRIRVLETLTVGTTEENQVVANQLERIKTEKTNIAQKEKLEEQNALRLKKENDDRDIEISTLKQDLELAKRTHELHCLQLEEQIYETKIESQKKLQELERLLTVSKKKVEELESLSESKSQRWKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDGPQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGAARSNKEGSDVRELMEQVGSLKDIITKKDEEIERLQVLKANISGVRHRVRSLSHGRSSSSPRRRSVASPRASQRSPVGKGPGHSDKAASNMDNCSDYSDKRSEAGSLHSLEDIRHQKECLLPSKVSTGDLSQSLTEDFVLLGFGDEVSEERLSDISDGGLTMGTETDGSTSVVEFTLFPEPSKPTEKSDNTKKPSLPSKHPKPAPQKPVPKNSSRFSLTKGTSKTPSSM

cccccccccccccccccccHHHcccHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccccccEEEEcccccEEEEccccccccccEEEEccccccccccHHHHHHHHHHHHHHHHccccEEEEEccccccccccccccccccccccccccHHHHHHHHHHHHHcccccEEEEEEEEEEEEccccccccccccccccccEEcccccccEEEcccEEEEcccHHHHHHHHHHHHHcHHHHHHcccccccccEEEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHccccccccccEEEEEEcccccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHccccccccccccccccccHHHcccccccHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc

cccccccccccccccccHcHHHccHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHccHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccccEEHcHHHcccHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccHHHHEccccccccccHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccEEEEEEcccEEEEEccccccccccEEEEEcEcccccccHHHHHHHHHHHHHHHcccccEEEEEEccccccHHHHHcEccccccccEcHHHHHHHHHHHHHHcccccEEEEEEEEEEEEEccEEEEcccccccccccEEEEcccccccEccccEEEEEccHHHHHHHHHHHHHHcccccccHHHHHHHcEEEEEEEEEEEEcccccEEEEEEEEEEccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccHHHcHHHHHHHHccccccEEEEEEEEccEHHHHHHHHHHHHHHHcccccEccccHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccHccHHHHHHHcccccccccHHHHHcccHHccccccccccccccccccHHHccccccccHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc

mesdengvfdhstgtpaenieALDNMAEGNQLSTLVEWLNEmiphihlpfeasEEKLRACLVDGTVLCLVLNklspdsvemganfepgpaNVKRFLAAMddmglprfelsdleqgnmapVLQCLRSLRasfsfcdeedtIQDHYrkrwnvsrldkfpateqeERQCNSldrkfqhslhstatSEESALMHHLAHTfhdvlhlkeggytdvsdVKILEFVnsscmdnastkSLFNIVNRILDECverkngdaphRVACLLRKVVPLIERRTATQYQNFKNQNNLFRAREEKYKSRIRVLETltvgtteeNQVVANQLERIKTEKTNIAQKEKLEEQNALRLkkenddrdiEISTLKQDLELAKRTHELHCLQLEEQIYETKIESQKKLQELERLLTVSKKKVEELESLSESKSQRWKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLkgnirvycrirpflpgqskkqtTIEYIgengelvvsnplkqgkdnhrlfkfnkvfgpeasqeevfldtrplirSVLDGYNVCIFaygqtgsgktytmsgpcisstedwgvnYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLlssdgpqrrlgiwnatlpnglavpeasmysvQSTADVLELMNIGLMNRAVCSTAlnerssrshsILTIHvrgtdlkngailRGSLHLidlagservdrseatGDRLREAQHINKSLSALGDVIFALAhknphvpyrnskLTQVLQSSLGGQAKTLMMVQlnpdvdsysETISTLKFAERvsgvelgaarsnkegsDVRELMEQVGSLKDIITKKDEEIERLQVLKANISGVRHRVrslshgrssssprrrsvasprasqrspvgkgpghsdkaasnmdncsdysdkrseagslhsLEDIRHqkecllpskvstgdlsqsltEDFVLLgfgdevseerlsdisdggltmgtetdgstsvveftlfpepskpteksdntkkpslpskhpkpapqkpvpknssrfsltkgtsktpssm

mesdengvfdhstgtpaeNIEALDNMAEGNQLSTLVEWLNEMIPHIHLPFEASEEKLRACLVDGTVLCLVLNKLSPDSVEMGANFEPGPANVKRFLAAMDDMGLPRFELSDLEQGNMAPVLQCLRSLRASFSFCDeedtiqdhyrkrwnvsrldkfpateqEERQCNSLDRKFQHSLHSTATSEESALMHHLAHTFHDVLHLKEGGYTDVSDVKILEFVNSSCMDNASTKSLFNIVNRILDECVerkngdaphrvaCLLRKVVPlierrtatqyqnfknqnnlfrareekYKSRIRVLetltvgtteenqvvanqleriktektniaqkekleeqnalrlkkenddrdieISTLKQDLELAKRTHELHCLQLEEQIYETKIESQKKLQELERLLtvskkkveeleslsesksqrWKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEvletkknyskefdCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLKGNIRVYCrirpflpgqskKQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKvfgpeasqeevflDTRPLIRSVLDGYNVCIFAYgqtgsgktytMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDGPQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTAlnerssrshsILTIhvrgtdlkngaILRGSLHlidlagservDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKfaervsgvelgaarsnkegsdvrelMEQVGSLKDIITKKDEEIERLQVLkanisgvrhrvrslshgrssssprrrsvasprasqrspvgkgpghsdkaasnMDNCSDYSDKRSEAGSLHSLEDIRHQKECLLPSKVSTGDLSQSLTEDFVLLGFGDEVSEerlsdisdggltmgtetdgstsVVEFTLfpepskpteksdntkkpslpskhpkpapqkpvpknssrfsltkgtsktpssm

MESDENGVFDHSTGTPAENIEALDNMAEGNQLSTLVEWLNEMIPHIHLPFEASEEKLRACLVDGTVLCLVLNKLSPDSVEMGANFEPGPANVKRFLAAMDDMGLPRFELSDLEQGNMAPVLQCLRSLRASFSFCDEEDTIQDHYRKRWNVSRLDKFPATEQEERQCNSLDRKFQHSLHSTATSEESALMHHLAHTFHDVLHLKEGGYTDVSDVKILEFVNSSCMDNASTKSLFNIVNRILDECVERKNGDAPHRVACLLRKVVPLIERRTATQYQNFKNQNNLFRAREEKYKSRIRvletltvgtteeNQVVANQLERIKTEKTNIAQKEKLEEQNALRLKKENDDRDIEISTLKQDLELAKRTHELHCLQLEEQIYETKIESQKKLQELERlltvskkkveeleslsesksQRWKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDGPQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGAARSNKEGSDVRELMEQVGSLKDIITKKDEEIERLQVLKANISGVrhrvrslshgrssssprrrsvasprasqrsPVGKGPGHSDKAASNMDNCSDYSDKRSEAGSLHSLEDIRHQKECLLPSKVSTGDLSQSLTEDFVLLGFGDEVSEERLSDISDGGLTMGTETDGSTSVVEFTLFPEPSKPTEKSDNTkkpslpskhpkpapQKPVPKNSSRFSLTKGTSKTPSSM

*****************************NQLSTLVEWLNEMIPHIHLPFEASEEKLRACLVDGTVLCLVLNKLSPD************ANVKRFLAAMDDMGLPRFELSDLEQGNMAPVLQCLRSLRASFSFCDEEDTIQDHYRKRWNVSRL**********************************LMHHLAHTFHDVLHLKEGGYTDVSDVKILEFVNSSCMDNASTKSLFNIVNRILDECVERKNGDAPHRVACLLRKVVPLIERRTATQYQNFKNQNNLFRAREEKYKSRIRVLETLTVGTTEENQVV*********************************************LELAKRTHELHCLQLEEQIYETK**********************************WKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDGPQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNE***RSHSILTIHVRGTDLKNGAILRGSLHLIDLAG*******************INKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAER******************************II******IERLQVLKANI*******************************************************************************************LTEDFVLLGFGD************************************************************************************

******************************QLSTLVEWLNEMIPHIHLPFEASEEKLRACLVDGTVLCLVLNKLSPDSV**********ANVKRFLAAMDDMGLPRFEL*******************************************************************************************************************************************************************************************************************************************************************************************************************************************************NYSKEFDCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGENGE****************FKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSS****************GLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLK*GAILRGSLHLIDLAGSERV**********REAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVEL**************************************************************************************************************************************************************************************************************************************

**********HSTGTPAENIEALDNMAEGNQLSTLVEWLNEMIPHIHLPFEASEEKLRACLVDGTVLCLVLNKLSPDSVEMGANFEPGPANVKRFLAAMDDMGLPRFELSDLEQGNMAPVLQCLRSLRASFSFCDEEDTIQDHYRKRWNVSRLDKFPA*********SLDRKFQHSLHSTATSEESALMHHLAHTFHDVLHLKEGGYTDVSDVKILEFVNSSCMDNASTKSLFNIVNRILDECVERKNGDAPHRVACLLRKVVPLIERRTATQYQNFKNQNNLFRAREEKYKSRIRVLETLTVGTTEENQVVANQLERIKTEKTNIAQKEKLEEQNALRLKKENDDRDIEISTLKQDLELAKRTHELHCLQLEEQIYETKIESQKKLQELERLLTVSKKKV**************KRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDGPQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGA**********RELMEQVGSLKDIITKKDEEIERLQVLKANISGVR*******************************************NMDNCSDYSDKRSEAGSLHSLEDIRHQKECLLPSKVSTGDLSQSLTEDFVLLGFGDEVSEERLSDISDGGLTMGTETDGSTSVVEFTLFPE*************************************************

***************************EGNQLSTLVEWLNEMIPHIHLPFEASEEKLRACLVDGTVLCLVLNKLSPDSVEMGANFEPGPANVKRFLAAMDDMGLPRFELSDLEQGNMAPVLQCLRSLRASFS******************************************************************VLHLKEGGYTDVSDVKILEFVNSSCMDNASTKSLFNIVNRILDECVERKNGDAPHRVACLLRKVVPLIERRTATQYQNFKNQNNLFRAREEKYKSRIRVLETLTVGTTEENQVVANQLERIKTEKTNIAQKEKLEEQNALRLKKENDDRDIEISTLKQDLELAKRTHELHCLQLEEQIYETKIESQKKLQELERLLTVSKKKVEELESLSESKSQRWKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDGPQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKNGAILRGSLHLIDLAG************RLR***HINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGAARSNKEGSDVRELMEQVGSLKDIITKKD***ER***************************************************************************************************************************************************************************************************

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii

iiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo

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MESDENGVFDHSTGTPAENIEALDNMAEGNQLSTLVEWLNEMIPHIHLPFEASEEKLRACLVDGTVLCLVLNKLSPDSVEMGANFEPGPANVKRFLAAMDDMGLPRFELSDLEQGNMAPVLQCLRSLRASFSFCDEEDTIQDHYRKRWNVSRLDKFPATEQEERQCNSLDRKFQHSLHSTATSEESALMHHLAHTFHDVLHLKEGGYTDVSDVKILEFVNSSCMDNASTKSLFNIVNRILDECVERKNGDAPHRVACLLRKVVPLIERRTATQYQNFKNQNNLFRAREEKYKSRIRVLETLTVGTTEENQVVANQLERIKTEKTNIAQKEKLEEQNALRLKKENDDRDIEISTLxxxxxxxxxxxxxxxxxxxxxIYETKIESQKKxxxxxxxxxxxxxxxxxxxxxSESKSQRWKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDGPQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGAARSNKEGSDVRELMEQVGSxxxxxxxxxxxxxxxxxxxxxISGVRHRVRSLSHGRSSSSPRRRSVASPRASQRSPVGKGPGHSDKAASNMDNCSDYSDKRSEAGSLHSLEDIRHQKECLLPSKVSTGDLSQSLTEDFVLLGFGDEVSEERLSDISDGGLTMGTETDGSTSVVEFTLFPEPSKPTEKSDNTKKPSLPSKHPKPAPQKPVPKNSSRFSLTKGTSKTPSSM

no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Alignment graph	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query		1055	2.2.26 [Sep-21-2011]
O81635		987	Kinesin-4 OS=Arabidopsis	no	no	0.420	0.449	0.601	1e-147
P46864		745	Kinesin-2 OS=Arabidopsis	no	no	0.431	0.610	0.398	8e-82
P46875		754	Kinesin-3 OS=Arabidopsis	no	no	0.324	0.453	0.470	9e-82
Q9BVG8		833	Kinesin-like protein KIFC	no	no	0.325	0.411	0.480	2e-80
O35231		824	Kinesin-like protein KIFC	no	no	0.333	0.427	0.472	1e-79
F4JGP4		790	Kinesin-5 OS=Arabidopsis	no	no	0.516	0.689	0.361	2e-79
Q07970		793	Kinesin-1 OS=Arabidopsis	no	no	0.515	0.686	0.366	1e-77
P79955		643	Carboxy-terminal kinesin	N/A	no	0.338	0.555	0.437	1e-75
Q5XI63		693	Kinesin-like protein KIFC	no	no	0.418	0.637	0.375	2e-73
P45962		598	Kinesin-like protein klp-	yes	no	0.323	0.570	0.436	3e-73

>sp\|O81635\|ATK4_ARATH Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2	Back alignment and function desciption

 Score =  524 bits (1349), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 269/447 (60%), Positives = 331/447 (74%), Gaps = 3/447 (0%)

Query: 409 ESKSQRWKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLGLNLKRL 468
           E K QR     H  Q  +  Q   IQ+L+    +TK  +   +  Y ++F  LG +L  L
Sbjct: 308 EKKFQRTNFEHHEEQKILLNQQKHIQELKQTLYTTKAGMKLLQMKYQEDFFHLGKHLNGL 367

Query: 469 IDAAEKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQ-SKKQTTIEYIGENGELVV 527
             AA  Y  +L ENR+LYN VQDLKGNIRVYCR+RPFLPGQ S   + +E I E G + +
Sbjct: 368 AYAATGYKRVLEENRKLYNLVQDLKGNIRVYCRVRPFLPGQESGGLSAVEDIDE-GTITI 426

Query: 528 SNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTY 587
             P K GK   + F FNKVFGP A+QEEVF D +PL+RSVLDGYNVCIFAYGQTGSGKT+
Sbjct: 427 RVPSKYGKAGQKPFMFNKVFGPSATQEEVFSDMQPLVRSVLDGYNVCIFAYGQTGSGKTF 486

Query: 588 TMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLSSDGPQ 647
           TM+GP   + E  GVNYRAL DLF +S  RK++  YE+ VQM+EIYNEQVRDLL+ DG  
Sbjct: 487 TMTGPKELTEESLGVNYRALADLFLLSNQRKDTTSYEISVQMLEIYNEQVRDLLAQDGQT 546

Query: 648 RRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILT 707
           +RL I N +  NG+ VPEAS+  V ST DV++LM++G MNRAV STA+N+RSSRSHS +T
Sbjct: 547 KRLEIRNNSH-NGINVPEASLVPVSSTDDVIQLMDLGHMNRAVSSTAMNDRSSRSHSCVT 605

Query: 708 IHVRGTDLKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALA 767
           +HV+G DL +G+IL GS+HL+DLAGSERVD+SE TGDRL+EAQHINKSLSALGDVI +L+
Sbjct: 606 VHVQGRDLTSGSILHGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVISSLS 665

Query: 768 HKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGA 827
            K  HVPYRNSKLTQ+LQ SLGG AKTLM V ++P+ D+  ETISTLKFAERV  VELGA
Sbjct: 666 QKTSHVPYRNSKLTQLLQDSLGGSAKTLMFVHISPEPDTLGETISTLKFAERVGSVELGA 725

Query: 828 ARSNKEGSDVRELMEQVGSLKDIITKK 854
           AR NK+ S+V+EL EQ+ +LK  + +K
Sbjct: 726 ARVNKDNSEVKELKEQIANLKMALVRK 752

Microtubule-binding motor protein.
Arabidopsis thaliana (taxid: 3702)

>sp\|P46864\|ATK2_ARATH Kinesin-2 OS=Arabidopsis thaliana GN=ATK2 PE=2 SV=1	Back alignment and function description

>sp\|P46875\|ATK3_ARATH Kinesin-3 OS=Arabidopsis thaliana GN=ATK3 PE=2 SV=1	Back alignment and function description

>sp\|Q9BVG8\|KIFC3_HUMAN Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=4	Back alignment and function description

>sp\|O35231\|KIFC3_MOUSE Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc3 PE=1 SV=4	Back alignment and function description

>sp\|F4JGP4\|ATK5_ARATH Kinesin-5 OS=Arabidopsis thaliana GN=ATK5 PE=2 SV=1	Back alignment and function description

>sp\|Q07970\|ATK1_ARATH Kinesin-1 OS=Arabidopsis thaliana GN=ATK1 PE=2 SV=1	Back alignment and function description

>sp\|P79955\|CTK2_XENLA Carboxy-terminal kinesin 2 OS=Xenopus laevis PE=2 SV=1	Back alignment and function description

>sp\|Q5XI63\|KIFC1_RAT Kinesin-like protein KIFC1 OS=Rattus norvegicus GN=Kifc1 PE=2 SV=1	Back alignment and function description

>sp\|P45962\|KLP3_CAEEL Kinesin-like protein klp-3 OS=Caenorhabditis elegans GN=klp-3 PE=1 SV=1	Back alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Alignment Graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1055
225426424		1101	PREDICTED: uncharacterized protein LOC10	0.971	0.930	0.666	0.0
297742519		1071	unnamed protein product [Vitis vinifera]	0.944	0.929	0.646	0.0
255537481		1069	kinesin heavy chain, putative [Ricinus c	0.933	0.921	0.610	0.0
147815114		1742	hypothetical protein VITISV_000953 [Viti	0.902	0.546	0.634	0.0
356511488		1069	PREDICTED: kinesin-4-like [Glycine max]	0.960	0.947	0.602	0.0
356527634		1069	PREDICTED: kinesin-4-like [Glycine max]	0.960	0.947	0.600	0.0
449452316		1119	PREDICTED: kinesin-4-like [Cucumis sativ	0.958	0.903	0.588	0.0
302372344		1071	kinesin KinG [Arabidopsis thaliana]	0.954	0.940	0.563	0.0
186492817		1071	kinesin motor, calponin homology and cal	0.954	0.940	0.562	0.0
224074937		1133	predicted protein [Populus trichocarpa]	0.944	0.879	0.577	0.0

>gi\|225426424\|ref\|XP_002274169.1\| PREDICTED: uncharacterized protein LOC100256435 [Vitis vinifera]	Back alignment and taxonomy information

 Score = 1353 bits (3501), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 702/1053 (66%), Positives = 830/1053 (78%), Gaps = 28/1053 (2%)

Query: 5    ENGVFDHSTG--TP--AENIEALDNMAEGN--QLSTLVEWLNEMIPHIHLPFEASEEKLR 58
            ENG F +S     P  AE +E+ D   EGN  Q + LVEWLN ++P++ LP EASEE LR
Sbjct: 11   ENGSFKNSNEGYNPEVAEQMESFDGTIEGNLSQRTQLVEWLNGILPYLSLPLEASEEDLR 70

Query: 59   ACLVDGTVLCLVLNKLSPDSVEMGANFEPGPANVKRFLAAMDDMGLPRFELSDLEQGNMA 118
            ACL+DGTVLC +LN+LSP S+EMG   E    N+KRFLAAM++MGLPRFELSDLEQG+M 
Sbjct: 71   ACLIDGTVLCGILNRLSPGSIEMGGISESYLENLKRFLAAMEEMGLPRFELSDLEQGSMD 130

Query: 119  PVLQCLRSLRASFSFCDEEDTIQDHYRKRWN---VSRLDKFPATEQE------------E 163
             VLQCL++LRA F+F    + I+++ RK+WN   V  L+ F  ++ +            E
Sbjct: 131  AVLQCLQTLRAHFNFNIGGENIRNYSRKKWNLCEVECLEGFDRSQGDASSHGEHSDEFVE 190

Query: 164  RQCNSLDRKFQHSLHSTATSEE-SALMHHLAHTFHDVLHLKEGGYTDVSDVKILEFVNSS 222
             + NSLD KFQH L  +  SE  +A +HH+ H F +   LK+GGY D    KI E V   
Sbjct: 191  ERRNSLDSKFQHVLRRSVFSEPLAASIHHVGHRFQEGFQLKQGGYADFPAAKISELVEQK 250

Query: 223  CMDNASTKSLFNIVNRILDECVERKNGDAPHRVACLLRKVVPLIERRTATQYQNFKNQNN 282
             ++N  T  LF+I+  ILD  +ERKNGD PHRVA LLRK++  IE+R +TQ +N KNQNN
Sbjct: 251  SLENTPTHLLFSILINILDGSIERKNGDVPHRVAFLLRKIIQEIEQRISTQAENLKNQNN 310

Query: 283  LFRAREEKYKSRIRVLETLTVGTTEENQVVANQLERIKTEKTNIAQKEKLEEQNALRLKK 342
            L++AREEKY+SRIRVLETL  GTTEEN+VV +QL++IK E T I +++KLEEQ+  RL K
Sbjct: 311  LYKAREEKYQSRIRVLETLATGTTEENRVVMHQLQQIKIENTKIEERKKLEEQDVDRLMK 370

Query: 343  ENDDRDIEISTLKQDLELAKRTHELHCLQLEEQIYETKIESQKKLQELERLLTVSKKKVE 402
            E D  D EI  LK++LE+A++THE HCLQLE Q  ETK+E +KKL+ELE LLT SKKKV+
Sbjct: 371  EKDRSDNEILALKEELEMARKTHEKHCLQLETQAKETKVELEKKLKELENLLTDSKKKVK 430

Query: 403  ELESLSESKSQRWKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLG 462
            ELE+ SESKS+RWKR E  YQ+F+  Q G +Q+LRVA +S K EVL+T + YS+EF+ LG
Sbjct: 431  ELEAFSESKSRRWKRKELRYQNFVDSQFGALQELRVASDSIKREVLKTHRTYSEEFNYLG 490

Query: 463  LNLKRLIDAAEKYHVILAENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKKQTTIEYIGEN 522
            + LK L +AAE YH++L ENRRLYNEVQDLKGNIRVYCRIRPFLPGQS+K TTIEYIGEN
Sbjct: 491  MKLKGLTEAAENYHMVLEENRRLYNEVQDLKGNIRVYCRIRPFLPGQSEKYTTIEYIGEN 550

Query: 523  GELVVSNPLKQGKDNHRLFKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTG 582
            GELV+ NP KQGKD+ RLFKFNKVF P A+QEEVFLDT+PLIRSVLDGYNVCIFAYGQTG
Sbjct: 551  GELVIVNPAKQGKDSRRLFKFNKVFSPAATQEEVFLDTQPLIRSVLDGYNVCIFAYGQTG 610

Query: 583  SGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNSILYEVGVQMVEIYNEQVRDLLS 642
            SGKTYTM+GP +SS  DWGVNYRALNDLF IS+SRK+SI+YEVGVQMVEIYNEQVRDLLS
Sbjct: 611  SGKTYTMTGPDVSSKVDWGVNYRALNDLFHISQSRKSSIMYEVGVQMVEIYNEQVRDLLS 670

Query: 643  SDGPQRR-LGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSSR 701
            SDG Q+R LGIW+ T PNGLAVP+ASM+ V+STADVLELMNIGLMNRAV +TALNERSSR
Sbjct: 671  SDGSQKRTLGIWSTTQPNGLAVPDASMHPVKSTADVLELMNIGLMNRAVGATALNERSSR 730

Query: 702  SHSILTIHVRGTDLKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGD 761
            SHSILT+HVRG DL+  A+LRGSLHL+DLAGSERV RSEATGDRLREAQHINKSLSALGD
Sbjct: 731  SHSILTVHVRGLDLETDAVLRGSLHLVDLAGSERVLRSEATGDRLREAQHINKSLSALGD 790

Query: 762  VIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVS 821
            VIFALA K+PHVPYRNSKLTQVLQSSLGGQAKTLM VQLNPDVDSYSETISTLKFAERVS
Sbjct: 791  VIFALAQKSPHVPYRNSKLTQVLQSSLGGQAKTLMFVQLNPDVDSYSETISTLKFAERVS 850

Query: 822  GVELGAARSNKEGSDVRELMEQVGSLKDIITKKDEEIERLQVLKANISGVRHRVRSLSHG 881
            GVELGAARSNKEG DVRELMEQV  L+D   KKD EIE+LQ +  N +  +  + SL +G
Sbjct: 851  GVELGAARSNKEGRDVRELMEQVAFLRDSNAKKDLEIEQLQQVNVNSTSGKRGMNSLRYG 910

Query: 882  RSSSSPRRRSVASPRASQRSPVGKGPGHSDKAASNMDNCSDYSDKRSEAGSLHSLEDIRH 941
              SSSPRR S+ + R S R P GKG G   KAAS++DNCS+YSDK SEAGSL S++D RH
Sbjct: 911  --SSSPRRHSIGASRQSHRLPQGKGSGLVQKAASDLDNCSEYSDKHSEAGSLPSIDDFRH 968

Query: 942  QKECLLPSKVSTGDLSQSLTEDFVLLGFGDEVSEERLSDISDGGLTMGTETDGS-TSVVE 1000
             KEC   SK++ GD+ Q+ TED  LLGFGD  SEERLSDISDGGL+MGTETDGS +S+VE
Sbjct: 969  -KECFAQSKLAGGDVGQNFTEDIELLGFGDADSEERLSDISDGGLSMGTETDGSISSIVE 1027

Query: 1001 FTLFPEPSKPTEKSDNTKKPSLPSKHPKPAPQK 1033
            FTLFPE  KP E ++  +K ++PSK P+  PQK
Sbjct: 1028 FTLFPEAVKPAENTEKIEKLTMPSKLPR-IPQK 1059

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi\|297742519\|emb\|CBI34668.3\| unnamed protein product [Vitis vinifera]	Back alignment and taxonomy information

>gi\|255537481\|ref\|XP_002509807.1\| kinesin heavy chain, putative [Ricinus communis] gi\|223549706\|gb\|EEF51194.1\| kinesin heavy chain, putative [Ricinus communis]	Back alignment and taxonomy information

>gi\|147815114\|emb\|CAN65659.1\| hypothetical protein VITISV_000953 [Vitis vinifera]	Back alignment and taxonomy information

>gi\|356511488\|ref\|XP_003524458.1\| PREDICTED: kinesin-4-like [Glycine max]	Back alignment and taxonomy information

>gi\|356527634\|ref\|XP_003532413.1\| PREDICTED: kinesin-4-like [Glycine max]	Back alignment and taxonomy information

>gi\|449452316\|ref\|XP_004143905.1\| PREDICTED: kinesin-4-like [Cucumis sativus]	Back alignment and taxonomy information

>gi\|302372344\|gb\|ADL28383.1\| kinesin KinG [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|186492817\|ref\|NP_176551.3\| kinesin motor, calponin homology and calcium binding and coiled-coil domain-containing protein [Arabidopsis thaliana] gi\|332196001\|gb\|AEE34122.1\| kinesin motor, calponin homology and calcium binding and coiled-coil domain-containing protein [Arabidopsis thaliana]	Back alignment and taxonomy information

>gi\|224074937\|ref\|XP_002304498.1\| predicted protein [Populus trichocarpa] gi\|222841930\|gb\|EEE79477.1\| predicted protein [Populus trichocarpa]	Back alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Alignment graph	Length	Definition	Q cover	H cover	Identity	E-value
Query		1055
TAIR\|locus:2026639		1071	AT1G63640 [Arabidopsis thalian	0.771	0.760	0.592	7.9e-252
TAIR\|locus:2155095		961	AT5G41310 [Arabidopsis thalian	0.311	0.342	0.540	5.2e-230
TAIR\|locus:2027854		1025	AT1G73860 [Arabidopsis thalian	0.505	0.52	0.623	3.7e-225
TAIR\|locus:2014129		1140	AT1G18410 [Arabidopsis thalian	0.499	0.462	0.604	9.3e-165
TAIR\|locus:2061992		983	AT2G47500 [Arabidopsis thalian	0.407	0.437	0.612	3e-154
TAIR\|locus:2101645		1087	KP1 "kinesin-like protein 1" [	0.414	0.402	0.606	4.5e-152
TAIR\|locus:2148543		987	ATK4 "kinesin 4" [Arabidopsis	0.417	0.445	0.602	2.1e-151
TAIR\|locus:2195316		1010	AT1G09170 [Arabidopsis thalian	0.2	0.208	0.617	3.1e-129
TAIR\|locus:2076289		922	AT3G10310 [Arabidopsis thalian	0.179	0.204	0.673	8.4e-119
ZFIN\|ZDB-GENE-030131-3724		937	kifc3 "kinesin family member C	0.468	0.527	0.388	1.2e-83

TAIR\|locus:2026639 AT1G63640 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

 Score = 2425 (858.7 bits), Expect = 7.9e-252, P = 7.9e-252
 Identities = 485/819 (59%), Positives = 596/819 (72%)

Query:   196 FHDVLHLKEGGYTDVSDVKILEFVNSSCMDNASTKSLFNIVNRILDECVERKNGDAPHRV 255
             F D    KEG   D+SD KI + + S+ + NA T+SLF++++++LDE + + NG   H +
Sbjct:   173 FTDGFQSKEGSEIDMSDAKISDLLKSNSLRNAPTRSLFDMLDKLLDESMTKMNGHVSHAM 232

Query:   256 ACLLRKVVPLIERRTATQYQNFKNQNNLFRAREEKYKSRIRXXXXXXXXXXXXNQVVANQ 315
             A LL  +V +IE+R + Q  N KNQN LFR REEKY+SRI+            N++V N 
Sbjct:   233 ASLLSALVQVIEQRISNQADNLKNQNILFRVREEKYRSRIKVLESLAAGTTKENEIVTNC 292

Query:   316 LERIKTEKTNIAQKEKLEEQNALRLKKENDDRDIEISTLKQDLELAKRTHELHCLQLEEQ 375
             +E IK EKT I +KE+ EE++ +RL+KE +  D EI  LKQ+L+L K THE  CL+LE +
Sbjct:   293 MEHIKLEKTRIEEKERSEEKDVVRLRKEKERSDAEIRQLKQELKLVKETHENQCLELEAK 352

Query:   376 IYETKIESQKKLQELERXXXXXXXXXXXXXXXXXXXXQRWKRIEHSYQSFMGCQLGVIQD 435
               +T+ E +KKL++ E                     QRW++ E  YQ+F+    G +Q+
Sbjct:   353 AQKTRDELEKKLKDAELHVVDSSRKVKELEKLCQSKSQRWEKKECIYQNFIDNHSGALQE 412

Query:   436 LRVAFESTKHEVLETKKNYSKEFDCLGLNLKRLIDAAEKYHVILAENRRLYNEVQDLKGN 495
             L     S KHEV+ T++ Y ++ +  GL LK + DAA+ YHV+L ENRRLYNEVQ+LKGN
Sbjct:   413 LSATSLSIKHEVVRTQRKYFEDLNYYGLKLKGVADAAKNYHVVLEENRRLYNEVQELKGN 472

Query:   496 IRVYCRIRPFLPGQSKKQTTIEYIGENGELVVSNPLKQGKDNHRLFKFNKVFGPEASQEE 555
             IRVYCRIRPFLPGQ+ +QTTIEYIGE GELVV+NP KQGKD HRLFKFNKVF   A+QEE
Sbjct:   473 IRVYCRIRPFLPGQNSRQTTIEYIGETGELVVANPFKQGKDTHRLFKFNKVFDQAATQEE 532

Query:   556 VFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISE 615
             VFLDTRPLIRS+LDGYNVCIFAYGQTGSGKTYTMSGP I+S EDWGVNYRALNDLF +++
Sbjct:   533 VFLDTRPLIRSILDGYNVCIFAYGQTGSGKTYTMSGPSITSKEDWGVNYRALNDLFLLTQ 592

Query:   616 SRKNSILYEVGVQMVEIYNEQVRDLLSSDGPQRRLGIWNATLPNGLAVPEASMYSVQSTA 675
             SR+N+++YEVGVQMVEIYNEQVRD+LS  G  RRLGIWN  LPNGLAVP+ASM+ V+ST 
Sbjct:   593 SRQNTVMYEVGVQMVEIYNEQVRDILSDGGSSRRLGIWNTALPNGLAVPDASMHCVRSTE 652

Query:   676 DVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKNGAILRGSLHLIDLAGSER 735
             DVLELMNIGLMNR V +TALNERSSRSH +L++HVRG D++  +ILRGSLHL+DLAGSER
Sbjct:   653 DVLELMNIGLMNRTVGATALNERSSRSHCVLSVHVRGVDVETDSILRGSLHLVDLAGSER 712

Query:   736 VDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTL 795
             VDRSEATG+RL+EAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTL
Sbjct:   713 VDRSEATGERLKEAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSLGGQAKTL 772

Query:   796 MMVQLNPDVDSYSETISTLKFAERVSGVELGAARSNKEGSDVRELMEQVGSLKDIITKKD 855
             M VQ+NPD DSY+ET+STLKFAERVSGVELGAA+S+KEG DVR+LMEQV +LKD+I KKD
Sbjct:   773 MFVQVNPDGDSYAETVSTLKFAERVSGVELGAAKSSKEGRDVRQLMEQVSNLKDVIAKKD 832

Query:   856 EEIERLQVLKANISGVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVGKGPGHSDKAAS 915
             EE++  Q +K N +                                  GK  G   +  S
Sbjct:   833 EELQNFQKVKGNNA---TSLKRGLSNLRLVGPTSPRRHSIGASPNARRGKASGLFGRGTS 889

Query:   916 NMDNCSDYSDKRSEAGSLHSLEDIRHQKECLLPSKVSTGDLSQSLT-EDFVLLGFGDEVS 974
             ++DNCS+YS K S++GS  S ++ +HQK+   PSK +          ED  L+G  D  S
Sbjct:   890 DVDNCSEYSSKHSDSGSQQSSDERKHQKDYHQPSKFAGAAKGIDFDDEDVELVGLADADS 949

Query:   975 EERLSDISDGGLTMGTETDGS-TSVVEFTLFPEPSKPTE 1012
             E+RLSDISD  L+MGTETDGS +S VE TLFPE +KP E
Sbjct:   950 EDRLSDISDSCLSMGTETDGSISSAVELTLFPETAKPLE 988

GO:0003777 "microtubule motor activity" evidence=IEA;ISS

GO:0005524 "ATP binding" evidence=IEA

GO:0007018 "microtubule-based movement" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0000226 "microtubule cytoskeleton organization" evidence=RCA

GO:0000911 "cytokinesis by cell plate formation" evidence=RCA

GO:0006306 "DNA methylation" evidence=RCA

GO:0006342 "chromatin silencing" evidence=RCA

GO:0006346 "methylation-dependent chromatin silencing" evidence=RCA

GO:0007267 "cell-cell signaling" evidence=RCA

GO:0009616 "virus induced gene silencing" evidence=RCA

GO:0009909 "regulation of flower development" evidence=RCA

GO:0010267 "production of ta-siRNAs involved in RNA interference" evidence=RCA

GO:0016458 "gene silencing" evidence=RCA

GO:0016570 "histone modification" evidence=RCA

GO:0016572 "histone phosphorylation" evidence=RCA

GO:0031047 "gene silencing by RNA" evidence=RCA

GO:0031048 "chromatin silencing by small RNA" evidence=RCA

GO:0034968 "histone lysine methylation" evidence=RCA

GO:0035196 "production of miRNAs involved in gene silencing by miRNA" evidence=RCA

GO:0048449 "floral organ formation" evidence=RCA

GO:0051567 "histone H3-K9 methylation" evidence=RCA

TAIR\|locus:2155095 AT5G41310 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2027854 AT1G73860 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2014129 AT1G18410 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2061992 AT2G47500 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2101645 KP1 "kinesin-like protein 1" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2148543 ATK4 "kinesin 4" [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2195316 AT1G09170 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

TAIR\|locus:2076289 AT3G10310 [Arabidopsis thaliana (taxid:3702)]	Back alignment and assigned GO terms

ZFIN\|ZDB-GENE-030131-3724 kifc3 "kinesin family member C3" [Danio rerio (taxid:7955)]	Back alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Alignment Graph	Length	Definition	E-value
Query		1055
cd01366		329	cd01366, KISc_C_terminal, Kinesin motor domain, KI	1e-155
smart00129		335	smart00129, KISc, Kinesin motor, catalytic domain	1e-134
pfam00225		326	pfam00225, Kinesin, Kinesin motor domain	1e-128
cd00106		328	cd00106, KISc, Kinesin motor domain	1e-121
cd01369		325	cd01369, KISc_KHC_KIF5, Kinesin motor domain, kine	6e-94
cd01371		333	cd01371, KISc_KIF3, Kinesin motor domain, kinesins	1e-88
cd01370		338	cd01370, KISc_KIP3_like, Kinesin motor domain, KIP	6e-88
cd01372		341	cd01372, KISc_KIF4, Kinesin motor domain, KIF4-lik	3e-86
cd01364		352	cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC	2e-85
cd01365		356	cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, K	6e-82
cd01374		321	cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E	6e-79
cd01375		334	cd01375, KISc_KIF9_like, Kinesin motor domain, KIF	2e-73
cd01376		319	cd01376, KISc_KID_like, Kinesin motor domain, KIF2	4e-73
cd01373		337	cd01373, KISc_KLP2_like, Kinesin motor domain, KLP	1e-70
cd01367		322	cd01367, KISc_KIF2_like, Kinesin motor domain, KIF	3e-69
cd01368		345	cd01368, KISc_KIF23_like, Kinesin motor domain, KI	4e-66
COG5059		568	COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	2e-64
PLN03188		1320	PLN03188, PLN03188, kinesin-12 family protein; Pro	3e-51
cd01363		186	cd01363, Motor_domain, Myosin and Kinesin motor do	1e-39
COG5059		568	COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	3e-14
cd01363		186	cd01363, Motor_domain, Myosin and Kinesin motor do	2e-12
cd00014		107	cd00014, CH, Calponin homology domain; actin-bindi	2e-08
smart00033		101	smart00033, CH, Calponin homology domain	7e-07
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	4e-06
pfam13851		201	pfam13851, GAS, Growth-arrest specific micro-tubul	2e-05
pfam00307		104	pfam00307, CH, Calponin homology (CH) domain	2e-05
TIGR04211		198	TIGR04211, SH3_and_anchor, SH3 domain protein	4e-04
COG1196		1163	COG1196, Smc, Chromosome segregation ATPases [Cell	0.002
pfam05622		713	pfam05622, HOOK, HOOK protein	0.003
pfam06785		401	pfam06785, UPF0242, Uncharacterized protein family	0.003
PTZ00121		2084	PTZ00121, PTZ00121, MAEBL; Provisional	0.004

>gnl\|CDD\|238662 cd01366, KISc_C_terminal, Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins	Back alignment and domain information

 Score =  462 bits (1190), Expect = e-155
 Identities = 172/338 (50%), Positives = 228/338 (67%), Gaps = 13/338 (3%)

Query: 493 KGNIRVYCRIRPFLPG-QSKKQTTIEYIGENG-ELVVSNPLKQGKDNHRLFKFNKVFGPE 550
           KGNIRV+CR+RP LP   ++  + I +  E+G  + +S    + K     F F++VF P+
Sbjct: 1   KGNIRVFCRVRPLLPSESTEYSSVISFPDEDGGTIELSKGTGKKKS----FSFDRVFDPD 56

Query: 551 ASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDL 610
           ASQE+VF +  PL++S LDGYNVCIFAYGQTGSGKTYTM GP     E+ G+  RAL  L
Sbjct: 57  ASQEDVFEEVSPLVQSALDGYNVCIFAYGQTGSGKTYTMEGP----PENPGIIPRALEQL 112

Query: 611 FEISESRKN-SILYEVGVQMVEIYNEQVRDLLSSD-GPQRRLGIWNATLPNGLAVPEASM 668
           F  +E  K     Y +   M+EIYNE +RDLL++   P+++L I + +      V   + 
Sbjct: 113 FNTAEELKEKGWSYTITASMLEIYNETIRDLLATKPAPKKKLEIKHDS-KGETYVTNLTE 171

Query: 669 YSVQSTADVLELMNIGLMNRAVCSTALNERSSRSHSILTIHVRGTDLKNGAILRGSLHLI 728
             V S  +V  L+N+G  NR+V ST +NE SSRSH++  + +RGT+L+ G   RG L+L+
Sbjct: 172 VPVSSPEEVTRLLNLGSKNRSVASTNMNEHSSRSHAVFQLKIRGTNLQTGEQTRGKLNLV 231

Query: 729 DLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKLTQVLQSSL 788
           DLAGSER+ +S ATGDRL+EAQ INKSLSALGDVI AL  K+ HVPYRNSKLT +LQ SL
Sbjct: 232 DLAGSERLKKSGATGDRLKEAQAINKSLSALGDVISALRSKDSHVPYRNSKLTYLLQDSL 291

Query: 789 GGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELG 826
           GG +KTLM V ++P   + SET+ +L+FA RV  VELG
Sbjct: 292 GGNSKTLMFVNISPLESNLSETLCSLRFASRVRSVELG 329

Ncd is a spindle motor protein necessary for chromosome segregation in meiosis. KIFC2/KIFC3-like kinesins have been implicated in motility of the Golgi apparatus as well as dentritic and axonal transport in neurons. This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Kinesins are microtubule-dependent molecular motors that play important roles in intracellular transport and in cell division. In this subgroup the motor domain is found at the C-terminus (C-type). C-type kinesins are (-) end-directed motors, i.e. they transport cargo towards the (-) end of the microtubule. Kinesin motor domains hydrolyze ATP at a rate of about 80 per second, and move along the microtubule at a speed of about 6400 Angstroms per second. To achieve that, kinesin head groups work in pairs. Upon replacing ADP with ATP, a kinesin motor domain increases its affinity for microtubule binding and locks in place. Also, the neck linker binds to the motor domain, which repositions the other head domain through the coiled-coil domain close to a second tubulin dimer, about 80 Angstroms along the microtubule. Meanwhile, ATP hydrolysis takes place, and when the second head domain binds to the microtubule, the first domain again replaces ADP with ATP, triggering a conformational change that pulls the first domain forward. Length = 329

>gnl\|CDD\|214526 smart00129, KISc, Kinesin motor, catalytic domain	Back alignment and domain information

>gnl\|CDD\|215803 pfam00225, Kinesin, Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|238054 cd00106, KISc, Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|238665 cd01369, KISc_KHC_KIF5, Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup	Back alignment and domain information

>gnl\|CDD\|238667 cd01371, KISc_KIF3, Kinesin motor domain, kinesins II or KIF3_like proteins	Back alignment and domain information

>gnl\|CDD\|238666 cd01370, KISc_KIP3_like, Kinesin motor domain, KIP3-like subgroup	Back alignment and domain information

>gnl\|CDD\|238668 cd01372, KISc_KIF4, Kinesin motor domain, KIF4-like subfamily	Back alignment and domain information

>gnl\|CDD\|238660 cd01364, KISc_BimC_Eg5, Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division	Back alignment and domain information

>gnl\|CDD\|238661 cd01365, KISc_KIF1A_KIF1B, Kinesin motor domain, KIF1_like proteins	Back alignment and domain information

>gnl\|CDD\|238670 cd01374, KISc_CENP_E, Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis	Back alignment and domain information

>gnl\|CDD\|238671 cd01375, KISc_KIF9_like, Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling	Back alignment and domain information

>gnl\|CDD\|238672 cd01376, KISc_KID_like, Kinesin motor domain, KIF22/Kid-like subgroup	Back alignment and domain information

>gnl\|CDD\|238669 cd01373, KISc_KLP2_like, Kinesin motor domain, KLP2-like subgroup	Back alignment and domain information

>gnl\|CDD\|238663 cd01367, KISc_KIF2_like, Kinesin motor domain, KIF2-like group	Back alignment and domain information

>gnl\|CDD\|238664 cd01368, KISc_KIF23_like, Kinesin motor domain, KIF23-like subgroup	Back alignment and domain information

>gnl\|CDD\|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>gnl\|CDD\|215621 PLN03188, PLN03188, kinesin-12 family protein; Provisional	Back alignment and domain information

>gnl\|CDD\|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|227392 COG5059, KIP1, Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>gnl\|CDD\|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain	Back alignment and domain information

>gnl\|CDD\|237981 cd00014, CH, Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity)	Back alignment and domain information

>gnl\|CDD\|214479 smart00033, CH, Calponin homology domain	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|222417 pfam13851, GAS, Growth-arrest specific micro-tubule binding	Back alignment and domain information

>gnl\|CDD\|215849 pfam00307, CH, Calponin homology (CH) domain	Back alignment and domain information

>gnl\|CDD\|234501 TIGR04211, SH3_and_anchor, SH3 domain protein	Back alignment and domain information

>gnl\|CDD\|224117 COG1196, Smc, Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>gnl\|CDD\|218661 pfam05622, HOOK, HOOK protein	Back alignment and domain information

>gnl\|CDD\|219176 pfam06785, UPF0242, Uncharacterized protein family (UPF0242)	Back alignment and domain information

>gnl\|CDD\|173412 PTZ00121, PTZ00121, MAEBL; Provisional	Back alignment and domain information

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Alignment Graph	Length	Definition	Probability
Query		1055
KOG0239		670	consensus Kinesin (KAR3 subfamily) [Cytoskeleton]	100.0
KOG4280		574	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0243		1041	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0245		1221	consensus Kinesin-like protein [Cytoskeleton]	100.0
PLN03188		1320	kinesin-12 family protein; Provisional	100.0
cd01370		338	KISc_KIP3_like Kinesin motor domain, KIP3-like sub	100.0
cd01373		337	KISc_KLP2_like Kinesin motor domain, KLP2-like sub	100.0
KOG0240		607	consensus Kinesin (SMY1 subfamily) [Cytoskeleton]	100.0
KOG0242		675	consensus Kinesin-like protein [Cytoskeleton]	100.0
cd01368		345	KISc_KIF23_like Kinesin motor domain, KIF23-like s	100.0
cd01365		356	KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like p	100.0
cd01367		322	KISc_KIF2_like Kinesin motor domain, KIF2-like gro	100.0
cd01364		352	KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spind	100.0
cd01371		333	KISc_KIF3 Kinesin motor domain, kinesins II or KIF	100.0
cd01376		319	KISc_KID_like Kinesin motor domain, KIF22/Kid-like	100.0
KOG0241		1714	consensus Kinesin-like protein [Cytoskeleton]	100.0
cd01366		329	KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/	100.0
cd01372		341	KISc_KIF4 Kinesin motor domain, KIF4-like subfamil	100.0
cd01369		325	KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy	100.0
cd01374		321	KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like	100.0
cd01375		334	KISc_KIF9_like Kinesin motor domain, KIF9-like sub	100.0
cd00106		328	KISc Kinesin motor domain. This catalytic (head) d	100.0
smart00129		335	KISc Kinesin motor, catalytic domain. ATPase. Micr	100.0
PF00225		335	Kinesin: Kinesin motor domain; InterPro: IPR001752	100.0
KOG0247		809	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0246		676	consensus Kinesin-like protein [Cytoskeleton]	100.0
KOG0244		913	consensus Kinesin-like protein [Cytoskeleton]	100.0
COG5059		568	KIP1 Kinesin-like protein [Cytoskeleton]	100.0
cd01363		186	Motor_domain Myosin and Kinesin motor domain. Thes	100.0
KOG2046		193	consensus Calponin [Cytoskeleton]	99.91
COG5199		178	SCP1 Calponin [Cytoskeleton]	99.74
cd00014		107	CH Calponin homology domain; actin-binding domain	99.54
COG5261		1054	IQG1 Protein involved in regulation of cellular mo	99.42
KOG2128		1401	consensus Ras GTPase-activating protein family - I	99.42
PF00307		108	CH: Calponin homology (CH) domain; InterPro: IPR00	99.28
smart00033		103	CH Calponin homology domain. Actin binding domains	99.28
KOG2996		865	consensus Rho guanine nucleotide exchange factor V	99.07
COG5059		568	KIP1 Kinesin-like protein [Cytoskeleton]	99.03
KOG0532		722	consensus Leucine-rich repeat (LRR) protein, conta	98.97
KOG0046		627	consensus Ca2+-binding actin-bundling protein (fim	97.65
PF11971		85	CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 T	97.28
PF00038		312	Filament: Intermediate filament protein; InterPro:	97.13
PHA02562		562	46 endonuclease subunit; Provisional	96.87
KOG2129		552	consensus Uncharacterized conserved protein H4 [Fu	96.85
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	96.65
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	96.63
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	96.62
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	96.59
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	96.58
TIGR02169		1164	SMC_prok_A chromosome segregation protein SMC, pri	96.52
PF07888		546	CALCOCO1: Calcium binding and coiled-coil domain (	96.48
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	96.44
KOG4673		961	consensus Transcription factor TMF, TATA element m	96.33
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	96.24
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	96.24
KOG0971		1243	consensus Microtubule-associated protein dynactin	96.23
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	96.18
COG1196		1163	Smc Chromosome segregation ATPases [Cell division	96.14
TIGR02168		1179	SMC_prok_B chromosome segregation protein SMC, com	96.11
PRK11637		428	AmiB activator; Provisional	96.1
PF15397		258	DUF4618: Domain of unknown function (DUF4618)	96.04
PF09726		697	Macoilin: Transmembrane protein; InterPro: IPR0191	96.03
PRK11637		428	AmiB activator; Provisional	95.99
KOG0996		1293	consensus Structural maintenance of chromosome pro	95.96
KOG0161		1930	consensus Myosin class II heavy chain [Cytoskeleto	95.85
PF12128		1201	DUF3584: Protein of unknown function (DUF3584); In	95.82
PRK02224		880	chromosome segregation protein; Provisional	95.74
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	95.66
COG1340		294	Uncharacterized archaeal coiled-coil protein [Func	95.6
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	95.6
TIGR00606		1311	rad50 rad50. This family is based on the phylogeno	95.59
PF09755		310	DUF2046: Uncharacterized conserved protein H4 (DUF	95.45
PF06395		89	CDC24: CDC24 Calponin; InterPro: IPR010481 This is	95.4
PF10498		359	IFT57: Intra-flagellar transport protein 57 ; Inte	95.33
PRK02224		880	chromosome segregation protein; Provisional	95.31
PF05667		594	DUF812: Protein of unknown function (DUF812); Inte	95.12
PF05010		207	TACC: Transforming acidic coiled-coil-containing p	95.08
PRK03918		880	chromosome segregation protein; Provisional	95.08
PF15397		258	DUF4618: Domain of unknown function (DUF4618)	95.05
PHA02562		562	46 endonuclease subunit; Provisional	95.0
KOG0996		1293	consensus Structural maintenance of chromosome pro	94.88
KOG1029		1118	consensus Endocytic adaptor protein intersectin [S	94.85
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	94.85
KOG0994		1758	consensus Extracellular matrix glycoprotein Lamini	94.73
KOG0977		546	consensus Nuclear envelope protein lamin, intermed	94.68
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	94.65
KOG0971		1243	consensus Microtubule-associated protein dynactin	94.59
KOG0933		1174	consensus Structural maintenance of chromosome pro	94.55
KOG1937		521	consensus Uncharacterized conserved protein [Funct	94.52
PRK04863		1486	mukB cell division protein MukB; Provisional	94.5
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	94.42
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	94.39
KOG0250		1074	consensus DNA repair protein RAD18 (SMC family pro	94.25
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	94.16
PF05483		786	SCP-1: Synaptonemal complex protein 1 (SCP-1); Int	94.1
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	94.08
COG1579		239	Zn-ribbon protein, possibly nucleic acid-binding [	94.06
PF15070		617	GOLGA2L5: Putative golgin subfamily A member 2-lik	93.92
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	93.92
PF15035		182	Rootletin: Ciliary rootlet component, centrosome c	93.79
KOG0964		1200	consensus Structural maintenance of chromosome pro	93.75
KOG0243		1041	consensus Kinesin-like protein [Cytoskeleton]	93.73
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	93.7
PRK03918		880	chromosome segregation protein; Provisional	93.61
PRK01156		895	chromosome segregation protein; Provisional	93.5
PF05911		769	DUF869: Plant protein of unknown function (DUF869)	93.44
PF10481		307	CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0	93.4
PRK09039		343	hypothetical protein; Validated	93.38
KOG4807		593	consensus F-actin binding protein, regulates actin	93.24
PRK04863		1486	mukB cell division protein MukB; Provisional	93.18
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	93.18
KOG4674		1822	consensus Uncharacterized conserved coiled-coil pr	93.12
KOG0612		1317	consensus Rho-associated, coiled-coil containing p	93.07
PF12325		120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	93.05
PRK04778		569	septation ring formation regulator EzrA; Provision	92.97
KOG0995		581	consensus Centromere-associated protein HEC1 [Cell	92.81
COG5185		622	HEC1 Protein involved in chromosome segregation, i	92.8
COG4372		499	Uncharacterized protein conserved in bacteria with	92.77
KOG0933		1174	consensus Structural maintenance of chromosome pro	92.7
smart00787		312	Spc7 Spc7 kinetochore protein. This domain is foun	92.66
COG4372		499	Uncharacterized protein conserved in bacteria with	92.55
KOG4643		1195	consensus Uncharacterized coiled-coil protein [Fun	92.51
PF00038		312	Filament: Intermediate filament protein; InterPro:	92.49
PRK04778		569	septation ring formation regulator EzrA; Provision	92.32
PF00308		219	Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013	92.31
PF07926		132	TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro:	92.26
COG0556		663	UvrB Helicase subunit of the DNA excision repair c	92.05
PF05622		713	HOOK: HOOK protein; InterPro: IPR008636 This famil	91.74
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	91.71
PF14988		206	DUF4515: Domain of unknown function (DUF4515)	91.65
PF06818		202	Fez1: Fez1; InterPro: IPR009638 This family repres	91.53
COG1340		294	Uncharacterized archaeal coiled-coil protein [Func	91.51
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	91.25
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	91.03
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	90.67
PF00261		237	Tropomyosin: Tropomyosin; InterPro: IPR000533 Trop	90.67
PF13851		201	GAS: Growth-arrest specific micro-tubule binding	90.56
KOG4593		716	consensus Mitotic checkpoint protein MAD1 [Cell cy	90.53
PF14662		193	CCDC155: Coiled-coil region of CCDC155	90.13
PRK01156		895	chromosome segregation protein; Provisional	90.09
PF10174		775	Cast: RIM-binding protein of the cytomatrix active	90.08
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	90.05
PRK06893		229	DNA replication initiation factor; Validated	90.01
KOG2129		552	consensus Uncharacterized conserved protein H4 [Fu	89.62
PRK14086		617	dnaA chromosomal replication initiation protein; P	89.45
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	89.44
PRK06620		214	hypothetical protein; Validated	89.13
KOG4673		961	consensus Transcription factor TMF, TATA element m	89.11
PF06785		401	UPF0242: Uncharacterised protein family (UPF0242);	88.76
KOG1850		391	consensus Myosin-like coiled-coil protein [Cytoske	88.74
PRK10361		475	DNA recombination protein RmuC; Provisional	88.61
KOG0979		1072	consensus Structural maintenance of chromosome pro	88.46
COG2805		353	PilT Tfp pilus assembly protein, pilus retraction	88.46
KOG1899		861	consensus LAR transmembrane tyrosine phosphatase-i	88.12
KOG0999		772	consensus Microtubule-associated protein Bicaudal-	88.04
PRK08084		235	DNA replication initiation factor; Provisional	87.77
PRK12377		248	putative replication protein; Provisional	87.74
TIGR03007		498	pepcterm_ChnLen polysaccharide chain length determ	87.6
KOG0963		629	consensus Transcription factor/CCAAT displacement	87.26
PLN03188		1320	kinesin-12 family protein; Provisional	87.25
KOG0963		629	consensus Transcription factor/CCAAT displacement	87.18
COG2804		500	PulE Type II secretory pathway, ATPase PulE/Tfp pi	87.13
PRK08116		268	hypothetical protein; Validated	87.09
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	86.97
COG4942		420	Membrane-bound metallopeptidase [Cell division and	86.94
PRK14088		440	dnaA chromosomal replication initiation protein; P	86.93
TIGR01005		754	eps_transp_fam exopolysaccharide transport protein	86.83
KOG0980		980	consensus Actin-binding protein SLA2/Huntingtin-in	86.82
PF15254		861	CCDC14: Coiled-coil domain-containing protein 14	86.72
PRK06835		329	DNA replication protein DnaC; Validated	86.69
PRK05642		234	DNA replication initiation factor; Validated	86.61
PRK07952		244	DNA replication protein DnaC; Validated	86.52
PF12325		120	TMF_TATA_bd: TATA element modulatory factor 1 TATA	86.36
COG5185		622	HEC1 Protein involved in chromosome segregation, i	86.04
KOG0976		1265	consensus Rho/Rac1-interacting serine/threonine ki	85.99
KOG3000		295	consensus Microtubule-binding protein involved in	85.97
TIGR00362		405	DnaA chromosomal replication initiator protein Dna	85.94
PRK09039		343	hypothetical protein; Validated	85.57
PF12718		143	Tropomyosin_1: Tropomyosin like; InterPro: IPR0005	85.43
PRK00149		450	dnaA chromosomal replication initiation protein; R	85.26
PF05701		522	WEMBL: Weak chloroplast movement under blue light;	85.0
TIGR01843		423	type_I_hlyD type I secretion membrane fusion prote	84.97
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	84.97
PF10212		518	TTKRSYEDQ: Predicted coiled-coil domain-containing	84.79
PRK09087		226	hypothetical protein; Validated	84.61
PRK14087		450	dnaA chromosomal replication initiation protein; P	84.52
PF04949		159	Transcrip_act: Transcriptional activator; InterPro	84.47
cd07647		239	F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/	84.25
PF09730		717	BicD: Microtubule-associated protein Bicaudal-D; I	84.18
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	83.86
COG1484		254	DnaC DNA replication protein [DNA replication, rec	83.47
COG3883		265	Uncharacterized protein conserved in bacteria [Fun	83.35
PF10473		140	CENP-F_leu_zip: Leucine-rich repeats of kinetochor	83.31
TIGR03420		226	DnaA_homol_Hda DnaA regulatory inactivator Hda. Me	83.31
KOG1103		561	consensus Predicted coiled-coil protein [Function	83.27
cd07651		236	F-BAR_PombeCdc15_like The F-BAR (FES-CIP4 Homology	83.24
COG4477		570	EzrA Negative regulator of septation ring formatio	83.14
KOG0962		1294	consensus DNA repair protein RAD50, ABC-type ATPas	82.99
PRK08903		227	DnaA regulatory inactivator Hda; Validated	82.87
KOG0946		970	consensus ER-Golgi vesicle-tethering protein p115	82.55
PF06160		560	EzrA: Septation ring formation regulator, EzrA ; I	82.33
KOG0046		627	consensus Ca2+-binding actin-bundling protein (fim	82.31
PF08317		325	Spc7: Spc7 kinetochore protein; InterPro: IPR01325	82.24
PF09787		511	Golgin_A5: Golgin subfamily A member 5; InterPro:	82.23
TIGR01242		364	26Sp45 26S proteasome subunit P45 family. Many pro	82.01
PF10168		717	Nup88: Nuclear pore component; InterPro: IPR019321	81.98
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	81.95
PF04849		306	HAP1_N: HAP1 N-terminal conserved region; InterPro	81.85
KOG0240		607	consensus Kinesin (SMY1 subfamily) [Cytoskeleton]	81.85
PRK10865		857	protein disaggregation chaperone; Provisional	81.84
TIGR03185		650	DNA_S_dndD DNA sulfur modification protein DndD. T	81.7
cd07671		242	F-BAR_PSTPIP1 The F-BAR (FES-CIP4 Homology and Bin	81.59
KOG0804		493	consensus Cytoplasmic Zn-finger protein BRAP2 (BRC	81.49
PRK03992		389	proteasome-activating nucleotidase; Provisional	81.47
TIGR02928		365	orc1/cdc6 family replication initiation protein. M	81.26
COG0593		408	DnaA ATPase involved in DNA replication initiation	81.12
TIGR02680		1353	conserved hypothetical protein TIGR02680. Members	80.86
PF09731		582	Mitofilin: Mitochondrial inner membrane protein; I	80.52
PF06548		488	Kinesin-related: Kinesin-related; InterPro: IPR010	80.47
PF15619		194	Lebercilin: Ciliary protein causing Leber congenit	80.33
PRK06526		254	transposase; Provisional	80.23

>KOG0239 consensus Kinesin (KAR3 subfamily) [Cytoskeleton]	Back alignment and domain information

Probab=100.00  E-value=2.7e-97  Score=888.49  Aligned_cols=594  Identities=37%  Similarity=0.505  Sum_probs=509.2

Q ss_pred             CCCCcchHHHHHHHHHhHhhhhcCCCCchHHHHHHhHHHHHHHHHHhhhhHHHhhhhhHHHhhHHHHHHHHHHHhhhhcc
Q 001550          225 DNASTKSLFNIVNRILDECVERKNGDAPHRVACLLRKVVPLIERRTATQYQNFKNQNNLFRAREEKYKSRIRVLETLTVG  304 (1055)
Q Consensus       225 ~~~~~~~l~~~~~~~l~~~~~~~~~~~p~~~~~~l~kvv~e~e~ris~q~~~~~~q~~~~~~~~~~~~~~~~~le~l~~~  304 (1055)
                      .+.+...+..+...+++...+++...+.......++....++..+++.+...+.+....++..++.+.+.+..+.+++.+
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~  150 (670)
T KOG0239|consen   71 SNQPGGLLARLFKELIDLANSDKTSNVVEAYNERLRDLLSELQSNLSELNMALLESVEELSQAEEDNPSIFVSLLELAQE  150 (670)
T ss_pred             hcCcchhHHHhhhhcccccccCCCchhHHHHHHHHhhhccccccchhhhhhhhhhhhHhhhhhhcccccHHHHHHHHHhh
Confidence            36788788888888888888888877777778899999999999999999999999999999999999999999998877


Q ss_pred             chhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 001550          305 TTEENQVVANQLERIKTEKTNIAQKEKLEEQNALRLKKENDDRDIEISTLKQDLELAKRTHELHCLQLEEQIYETKIESQ  384 (1055)
Q Consensus       305 ~~ee~~~~~~~l~~l~~e~~k~eek~~~~e~~~~~~~~e~~~~~~e~~~Lk~ele~~k~~~e~~~~~le~~~~~~k~~le  384 (1055)
                      +........+.            .-....+ .+....++......++..+.++|+..+..++..+.+++. ....+..|+
T Consensus       151 ~~~~~~~~~~~------------~~~~~~~-~~~~~~k~~~~~~~~~~~~~~~l~~v~~~~~~~~~~l~~-~~~~~~~l~  216 (670)
T KOG0239|consen  151 NRGLYLDLSKV------------TPENSLS-LLDLALKESLKLESDLGDLVTELEHVTNSISELESVLKS-AQEERRVLA  216 (670)
T ss_pred             hcccccccccc------------chhhhHH-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHH
Confidence            76543332211            0000011 233345566667788999999999999999998888877 233344444


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHhHhhHHHhhHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHhhhhh
Q 001550          385 KKLQELERLLTVSKKKVEELESLSESKSQRWKRIEHSYQSFMGCQLGVIQDLRVAFESTKHEVLETKKNYSKEFDCLGLN  464 (1055)
Q Consensus       385 ~~l~e~~~~l~~~~~~~~~le~~~~~k~~~~~~~~~~~~~~~~~Q~~~l~el~~~~~~~k~ei~~~~~~~~~e~~~l~~~  464 (1055)
                      ..+.    .+...+..++.++.......+.           ++..+..+++|+.....++.++....+.+.+.+..++..
T Consensus       217 ~~~~----~~~~~~~~~~~l~~~~~~~~~~-----------i~~l~~~l~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~  281 (670)
T KOG0239|consen  217 DSLG----NYADLRRNIKPLEGLESTIKKK-----------IQALQQELEELKAELKELNDQVSLLTREVQEALKESNTL  281 (670)
T ss_pred             HHhh----hhhhHHHhhhhhhhhhhHHHHH-----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            4433    3334555555555544333322           455667788999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHH---HHhhhhhhhhhhccCCEEEEeecCCCCCcccCC-CccEEEeCCCCeEEEeCCCCCCCCCcee
Q 001550          465 LKRLIDAAEKYHVIL---AENRRLYNEVQDLKGNIRVYCRIRPFLPGQSKK-QTTIEYIGENGELVVSNPLKQGKDNHRL  540 (1055)
Q Consensus       465 l~~l~~~~~~y~~~l---~erRkL~N~vqelKGnIRV~~RVRP~~~~E~~~-~~~v~~~~~~~~~vi~~p~~~~~~~~k~  540 (1055)
                      +..|.+....|+...   .+||+|||+|+||||||||||||||+++++... ...+...++.+++.+..|....+...+.
T Consensus       282 ~~~L~~~~~~l~~~~~e~~~r~kL~N~i~eLkGnIRV~CRvRP~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  361 (670)
T KOG0239|consen  282 QSDLESLEENLVEKKKEKEERRKLHNEILELKGNIRVFCRVRPLLPSEKQRLQSKVIDTEEQGEVQVDSPDKGDKLEPQS  361 (670)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCceEEEEecCCCccccccccccccccCCcceeEeecCCCCCCCcccc
Confidence            999999999998777   899999999999999999999999999998764 4555555555778889988877777778


Q ss_pred             eeeceeeCCCCChHHHHhchHHHHHHhhcCcceeEEeecccCCCcceeeecCCCCCCCccchhHHHHHHHHHHHHhccCC
Q 001550          541 FKFNKVFGPEASQEEVFLDTRPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPCISSTEDWGVNYRALNDLFEISESRKNS  620 (1055)
Q Consensus       541 F~FD~VF~~~atQeeVf~~~~pLV~svLdGyN~~IfAYGQTGSGKTyTM~G~~~~~~~~~GIipRal~~LF~~~~~~~~~  620 (1055)
                      |.||+||+|.++|++||.++.|+|+++|||||+||||||||||||||||.||   +++++|||||++++||..+.....+
T Consensus       362 f~fdkVf~p~~sQ~~VF~e~~~lv~S~lDGYnVCIFAYGQTGSGKTyTM~G~---~~~~~Giipral~~lF~~~~~~~~g  438 (670)
T KOG0239|consen  362 FKFDKVFGPLASQDDVFEEVSPLVQSALDGYNVCIFAYGQTGSGKTYTMSGP---TPEDPGIIPRALEKLFRTITSLKSG  438 (670)
T ss_pred             ceeeeecCCcccHHHHHHHHHHHHHHHhcCcceeEEEecccCCCccccccCC---CcccCCccHHHHHHHHHHHHhhccC
Confidence            9999999999999999999999999999999999999999999999999996   5788999999999999999998889


Q ss_pred             ceEEEEEEEEEEecceeeeccCCCCCCcccccccccCCCceecCCcEEEEecCHHHHHHHHHhhhhccccccCCCcCCCC
Q 001550          621 ILYEVGVQMVEIYNEQVRDLLSSDGPQRRLGIWNATLPNGLAVPEASMYSVQSTADVLELMNIGLMNRAVCSTALNERSS  700 (1055)
Q Consensus       621 ~~~~V~vS~lEIYnE~V~DLL~~~~~~~~l~i~~~~~~g~~vv~~~~~~vvss~eev~~lL~~g~~nR~~~sT~~N~~SS  700 (1055)
                      |.|.+.+||+|||||+|+|||++.....++.|..+. .+...+.+++...|.+.+++..+++.|..||++++|.+|++||
T Consensus       439 ~~y~~~~s~~EIYNe~i~DlL~~~~~~~k~~I~~~~-~~~~~V~~~t~~~V~s~~~v~~ll~~g~~nRsv~~T~~Ne~SS  517 (670)
T KOG0239|consen  439 WKYDKTVSMLEIYNEAIRDLLSDESYVGKLEIVDDA-EGNLMVPLLTVIKVGSSEEVDILLEIGLSNRSVASTASNERSS  517 (670)
T ss_pred             ceEEeeeehhHHHHHHHHHhccccccccceeEEEcC-CCceecccceEEecCCHHHHHHHHHHhhccccccccccchhhh
Confidence            999999999999999999999887534455555444 4568888899999999999999999999999999999999999


Q ss_pred             CcccEEEEEEEeEecCCCcEEEeeeEEEecCCCccccCCcchhhhHHHHHHHhHhHHHHHHHHHHHhcCCCCccccCchh
Q 001550          701 RSHSILTIHVRGTDLKNGAILRGSLHLIDLAGSERVDRSEATGDRLREAQHINKSLSALGDVIFALAHKNPHVPYRNSKL  780 (1055)
Q Consensus       701 RSH~IftI~V~~~~~~~~~~~~skL~LVDLAGSER~~ks~~~g~rlkEa~~INkSLsaLg~VI~aLa~k~~hVPYRdSKL  780 (1055)
                      |||+||+|+|.+.+..++....|+|+|||||||||+++++++|+|++|+++||+||++||+||.||+.++.|||||||||
T Consensus       518 RSH~v~~v~v~g~~~~t~~~~~g~l~LVDLAGSER~~~s~~tG~RlkE~Q~INkSLS~LgdVi~AL~~k~~HiPyRNSKL  597 (670)
T KOG0239|consen  518 RSHLVFRVRIRGINELTGIRVTGVLNLVDLAGSERVSKSGVTGERLKEAQNINKSLSALGDVISALASKRSHIPYRNSKL  597 (670)
T ss_pred             ccceEEEEEEeccccCcccccccceeEeecccCcccCcCCCchhhhHHHHHhchhhhhhHHHHHHHhhcCCCCcccccch
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhhhccCCCcccceeEecCCCCCCHHHHHHHHHHHhHhccccccccccCCCcchHHHHHHHHHHHHHHH
Q 001550          781 TQVLQSSLGGQAKTLMMVQLNPDVDSYSETISTLKFAERVSGVELGAARSNKEGSDVRELMEQVGSLKDII  851 (1055)
Q Consensus       781 TrLLqdSLGGnskTlmI~~ISP~~~~~~ETLsTL~FA~Rak~I~~~~~k~~~~~~~v~eL~~qv~~Lk~~i  851 (1055)
                      |+|||+||||++||+|||+|||...++.||+++|+||+||+.+.+|+++..........++..++.++..+
T Consensus       598 T~lLq~sLGG~sKTLmfv~isP~~~~~~Etl~sL~FA~rv~~~~lG~a~~~~~~~~~~~~~~~~~~~~~~~  668 (670)
T KOG0239|consen  598 TQLLQDSLGGDSKTLMFVNISPAAAALFETLCSLRFATRVRSVELGSARKQVSTSDDVSLKRFGQLEKLST  668 (670)
T ss_pred             HHHhHhhhCCccceeeEEEeCccHHHHhhhhhccchHHHhhceecccccccccccchhhhhhhhhhhhhhh
Confidence            99999999999999999999999999999999999999999999999999988888888877777766543

>KOG4280 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0245 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>PLN03188 kinesin-12 family protein; Provisional	Back alignment and domain information

>cd01370 KISc_KIP3_like Kinesin motor domain, KIP3-like subgroup	Back alignment and domain information

>cd01373 KISc_KLP2_like Kinesin motor domain, KLP2-like subgroup	Back alignment and domain information

>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton]	Back alignment and domain information

>KOG0242 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>cd01368 KISc_KIF23_like Kinesin motor domain, KIF23-like subgroup	Back alignment and domain information

>cd01365 KISc_KIF1A_KIF1B Kinesin motor domain, KIF1_like proteins	Back alignment and domain information

>cd01367 KISc_KIF2_like Kinesin motor domain, KIF2-like group	Back alignment and domain information

>cd01364 KISc_BimC_Eg5 Kinesin motor domain, BimC/Eg5 spindle pole proteins, participate in spindle assembly and chromosome segregation during cell division	Back alignment and domain information

>cd01371 KISc_KIF3 Kinesin motor domain, kinesins II or KIF3_like proteins	Back alignment and domain information

>cd01376 KISc_KID_like Kinesin motor domain, KIF22/Kid-like subgroup	Back alignment and domain information

>KOG0241 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>cd01366 KISc_C_terminal Kinesin motor domain, KIFC2/KIFC3/ncd-like carboxy-terminal kinesins	Back alignment and domain information

>cd01372 KISc_KIF4 Kinesin motor domain, KIF4-like subfamily	Back alignment and domain information

>cd01369 KISc_KHC_KIF5 Kinesin motor domain, kinesin heavy chain (KHC) or KIF5-like subgroup	Back alignment and domain information

>cd01374 KISc_CENP_E Kinesin motor domain, CENP-E/KIP2-like subgroup, involved in chromosome movement and/or spindle elongation during mitosis	Back alignment and domain information

>cd01375 KISc_KIF9_like Kinesin motor domain, KIF9-like subgroup; might play a role in cell shape remodeling	Back alignment and domain information

>cd00106 KISc Kinesin motor domain	Back alignment and domain information

>smart00129 KISc Kinesin motor, catalytic domain	Back alignment and domain information

>PF00225 Kinesin: Kinesin motor domain; InterPro: IPR001752 Kinesin [, , ] is a microtubule-associated force-producing protein that may play a role in organelle transport	Back alignment and domain information

>KOG0247 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0246 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0244 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>cd01363 Motor_domain Myosin and Kinesin motor domain	Back alignment and domain information

>KOG2046 consensus Calponin [Cytoskeleton]	Back alignment and domain information

>COG5199 SCP1 Calponin [Cytoskeleton]	Back alignment and domain information

>cd00014 CH Calponin homology domain; actin-binding domain which may be present as a single copy or in tandem repeats (which increases binding affinity)	Back alignment and domain information

>COG5261 IQG1 Protein involved in regulation of cellular morphogenesis/cytokinesis [Cell division and chromosome partitioning / Signal transduction mechanisms]	Back alignment and domain information

>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms]	Back alignment and domain information

>PF00307 CH: Calponin homology (CH) domain; InterPro: IPR001715 The calponin homology domain (also known as CH-domain) is a superfamily of actin-binding domains found in both cytoskeletal proteins and signal transduction proteins []	Back alignment and domain information

>smart00033 CH Calponin homology domain	Back alignment and domain information

>KOG2996 consensus Rho guanine nucleotide exchange factor VAV3 [Signal transduction mechanisms]	Back alignment and domain information

>COG5059 KIP1 Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]	Back alignment and domain information

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]	Back alignment and domain information

>PF11971 CAMSAP_CH: CAMSAP CH domain; InterPro: IPR022613 This domain is the N-terminal CH domain from calmodulin-regulated spectrin-associated proteins - CAMSAP proteins	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>TIGR02169 SMC_prok_A chromosome segregation protein SMC, primarily archaeal type	Back alignment and domain information

>PF07888 CALCOCO1: Calcium binding and coiled-coil domain (CALCOCO1) like; InterPro: IPR012852 Proteins found in this family are similar to the coiled-coil transcriptional coactivator protein expressed by Mus musculus (CoCoA, Q8CGU1 from SWISSPROT)	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>COG1196 Smc Chromosome segregation ATPases [Cell division and chromosome partitioning]	Back alignment and domain information

>TIGR02168 SMC_prok_B chromosome segregation protein SMC, common bacterial type	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>PF15397 DUF4618: Domain of unknown function (DUF4618)	Back alignment and domain information

>PF09726 Macoilin: Transmembrane protein; InterPro: IPR019130 This entry represents the multi-pass transmembrane protein Macoilin, which is highly conserved in eukaryotes	Back alignment and domain information

>PRK11637 AmiB activator; Provisional	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton]	Back alignment and domain information

>PF12128 DUF3584: Protein of unknown function (DUF3584); InterPro: IPR021979 This family consist of uncharacterised bacterial proteins	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>TIGR00606 rad50 rad50	Back alignment and domain information

>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain	Back alignment and domain information

>PF06395 CDC24: CDC24 Calponin; InterPro: IPR010481 This is a calponin homology domain	Back alignment and domain information

>PF10498 IFT57: Intra-flagellar transport protein 57 ; InterPro: IPR019530 Eukaryotic cilia and flagella are specialised organelles found at the periphery of cells of diverse organisms	Back alignment and domain information

>PRK02224 chromosome segregation protein; Provisional	Back alignment and domain information

>PF05667 DUF812: Protein of unknown function (DUF812); InterPro: IPR008530 This family consists of several eukaryotic proteins of unknown function	Back alignment and domain information

>PF05010 TACC: Transforming acidic coiled-coil-containing protein (TACC); InterPro: IPR007707 This family contains the proteins TACC 1, 2 and 3, found concentrated in the centrosomes of eukaryotes which may play a conserved role in organising centrosomal microtubules	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>PF15397 DUF4618: Domain of unknown function (DUF4618)	Back alignment and domain information

>PHA02562 46 endonuclease subunit; Provisional	Back alignment and domain information

>KOG0996 consensus Structural maintenance of chromosome protein 4 (chromosome condensation complex Condensin, subunit C) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG1029 consensus Endocytic adaptor protein intersectin [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0994 consensus Extracellular matrix glycoprotein Laminin subunit beta [Extracellular structures]	Back alignment and domain information

>KOG0977 consensus Nuclear envelope protein lamin, intermediate filament superfamily [Cell cycle control, cell division, chromosome partitioning; Nuclear structure]	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0971 consensus Microtubule-associated protein dynactin DCTN1/Glued [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG1937 consensus Uncharacterized conserved protein [Function unknown]	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>KOG0250 consensus DNA repair protein RAD18 (SMC family protein) [Replication, recombination and repair]	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF05483 SCP-1: Synaptonemal complex protein 1 (SCP-1); InterPro: IPR008827 Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only]	Back alignment and domain information

>PF15070 GOLGA2L5: Putative golgin subfamily A member 2-like protein 5	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>PF15035 Rootletin: Ciliary rootlet component, centrosome cohesion	Back alignment and domain information

>KOG0964 consensus Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>KOG0243 consensus Kinesin-like protein [Cytoskeleton]	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>PRK03918 chromosome segregation protein; Provisional	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>PF05911 DUF869: Plant protein of unknown function (DUF869); InterPro: IPR008587 This family consists of a number of sequences found in plants	Back alignment and domain information

>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore []	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>KOG4807 consensus F-actin binding protein, regulates actin cytoskeletal organization [Cytoskeleton]	Back alignment and domain information

>PRK04863 mukB cell division protein MukB; Provisional	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>KOG4674 consensus Uncharacterized conserved coiled-coil protein [Function unknown]	Back alignment and domain information

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]	Back alignment and domain information

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>KOG0995 consensus Centromere-associated protein HEC1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>KOG0933 consensus Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E) [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>smart00787 Spc7 Spc7 kinetochore protein	Back alignment and domain information

>COG4372 Uncharacterized protein conserved in bacteria with the myosin-like domain [Function unknown]	Back alignment and domain information

>KOG4643 consensus Uncharacterized coiled-coil protein [Function unknown]	Back alignment and domain information

>PF00038 Filament: Intermediate filament protein; InterPro: IPR016044 Intermediate filaments (IF) [, , ] are proteins which are primordial components of the cytoskeleton and the nuclear envelope	Back alignment and domain information

>PRK04778 septation ring formation regulator EzrA; Provisional	Back alignment and domain information

>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication	Back alignment and domain information

>PF07926 TPR_MLP1_2: TPR/MLP1/MLP2-like protein; InterPro: IPR012929 This domain is found in a number of proteins, including TPR protein (P12270 from SWISSPROT) and yeast myosin-like proteins 1 (MLP1, Q02455 from SWISSPROT) and 2 (MLP2, P40457 from SWISSPROT)	Back alignment and domain information

>COG0556 UvrB Helicase subunit of the DNA excision repair complex [DNA replication, recombination, and repair]	Back alignment and domain information

>PF05622 HOOK: HOOK protein; InterPro: IPR008636 This family consists of several HOOK1, 2 and 3 proteins from different eukaryotic organisms	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>PF14988 DUF4515: Domain of unknown function (DUF4515)	Back alignment and domain information

>PF06818 Fez1: Fez1; InterPro: IPR009638 This family represents the eukaryotic Fez1 protein	Back alignment and domain information

>COG1340 Uncharacterized archaeal coiled-coil protein [Function unknown]	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF00261 Tropomyosin: Tropomyosin; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PF13851 GAS: Growth-arrest specific micro-tubule binding	Back alignment and domain information

>KOG4593 consensus Mitotic checkpoint protein MAD1 [Cell cycle control, cell division, chromosome partitioning]	Back alignment and domain information

>PF14662 CCDC155: Coiled-coil region of CCDC155	Back alignment and domain information

>PRK01156 chromosome segregation protein; Provisional	Back alignment and domain information

>PF10174 Cast: RIM-binding protein of the cytomatrix active zone; InterPro: IPR019323 This entry represents a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion []	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PRK06893 DNA replication initiation factor; Validated	Back alignment and domain information

>KOG2129 consensus Uncharacterized conserved protein H4 [Function unknown]	Back alignment and domain information

>PRK14086 dnaA chromosomal replication initiation protein; Provisional	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>PRK06620 hypothetical protein; Validated	Back alignment and domain information

>KOG4673 consensus Transcription factor TMF, TATA element modulatory factor [Transcription]	Back alignment and domain information

>PF06785 UPF0242: Uncharacterised protein family (UPF0242); InterPro: IPR009623 This is a group of proteins of unknown function	Back alignment and domain information

>KOG1850 consensus Myosin-like coiled-coil protein [Cytoskeleton]	Back alignment and domain information

>PRK10361 DNA recombination protein RmuC; Provisional	Back alignment and domain information

>KOG0979 consensus Structural maintenance of chromosome protein SMC5/Spr18, SMC superfamily [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair]	Back alignment and domain information

>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>KOG1899 consensus LAR transmembrane tyrosine phosphatase-interacting protein liprin [General function prediction only]	Back alignment and domain information

>KOG0999 consensus Microtubule-associated protein Bicaudal-D [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PRK08084 DNA replication initiation factor; Provisional	Back alignment and domain information

>PRK12377 putative replication protein; Provisional	Back alignment and domain information

>TIGR03007 pepcterm_ChnLen polysaccharide chain length determinant protein, PEP-CTERM locus subfamily	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>PLN03188 kinesin-12 family protein; Provisional	Back alignment and domain information

>KOG0963 consensus Transcription factor/CCAAT displacement protein CDP1 [Transcription]	Back alignment and domain information

>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion]	Back alignment and domain information

>PRK08116 hypothetical protein; Validated	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>COG4942 Membrane-bound metallopeptidase [Cell division and chromosome partitioning]	Back alignment and domain information

>PRK14088 dnaA chromosomal replication initiation protein; Provisional	Back alignment and domain information

>TIGR01005 eps_transp_fam exopolysaccharide transport protein family	Back alignment and domain information

>KOG0980 consensus Actin-binding protein SLA2/Huntingtin-interacting protein Hip1 [Cytoskeleton]	Back alignment and domain information

>PF15254 CCDC14: Coiled-coil domain-containing protein 14	Back alignment and domain information

>PRK06835 DNA replication protein DnaC; Validated	Back alignment and domain information

>PRK05642 DNA replication initiation factor; Validated	Back alignment and domain information

>PRK07952 DNA replication protein DnaC; Validated	Back alignment and domain information

>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes []	Back alignment and domain information

>COG5185 HEC1 Protein involved in chromosome segregation, interacts with SMC proteins [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG0976 consensus Rho/Rac1-interacting serine/threonine kinase Citron [Signal transduction mechanisms]	Back alignment and domain information

>KOG3000 consensus Microtubule-binding protein involved in cell cycle control [Cell cycle control, cell division, chromosome partitioning; Cytoskeleton]	Back alignment and domain information

>TIGR00362 DnaA chromosomal replication initiator protein DnaA	Back alignment and domain information

>PRK09039 hypothetical protein; Validated	Back alignment and domain information

>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells	Back alignment and domain information

>PRK00149 dnaA chromosomal replication initiation protein; Reviewed	Back alignment and domain information

>PF05701 WEMBL: Weak chloroplast movement under blue light; InterPro: IPR008545 This family consists of several plant proteins of unknown function	Back alignment and domain information

>TIGR01843 type_I_hlyD type I secretion membrane fusion protein, HlyD family	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>PF10212 TTKRSYEDQ: Predicted coiled-coil domain-containing protein; InterPro: IPR019348 This entry represents a C-terminal 500 residue region, which contains a conserved TTKRSYEDQ motif	Back alignment and domain information

>PRK09087 hypothetical protein; Validated	Back alignment and domain information

>PRK14087 dnaA chromosomal replication initiation protein; Provisional	Back alignment and domain information

>PF04949 Transcrip_act: Transcriptional activator; InterPro: IPR007033 Golgins are a family of coiled-coil proteins associated with the Golgi apparatus necessary for tethering events in membrane fusion and as structural supports for Golgi cisternae []	Back alignment and domain information

>cd07647 F-BAR_PSTPIP The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Proteins	Back alignment and domain information

>PF09730 BicD: Microtubule-associated protein Bicaudal-D; InterPro: IPR018477 BicD proteins consist of three coiled-coiled domains and are involved in dynein-mediated minus end-directed transport from the Golgi apparatus to the endoplasmic reticulum (ER) []	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>COG1484 DnaC DNA replication protein [DNA replication, recombination, and repair]	Back alignment and domain information

>COG3883 Uncharacterized protein conserved in bacteria [Function unknown]	Back alignment and domain information

>PF10473 CENP-F_leu_zip: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1; InterPro: IPR019513 Cenp-F, a centromeric kinetochore, microtubule-binding protein consisting of two 1,600-amino acid-long coils, is essential for the full functioning of the mitotic checkpoint pathway [, ]	Back alignment and domain information

>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda	Back alignment and domain information

>KOG1103 consensus Predicted coiled-coil protein [Function unknown]	Back alignment and domain information

>cd07651 F-BAR_PombeCdc15_like The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Schizosaccharomyces pombe Cdc15, and similar proteins	Back alignment and domain information

>COG4477 EzrA Negative regulator of septation ring formation [Cell division and chromosome partitioning]	Back alignment and domain information

>KOG0962 consensus DNA repair protein RAD50, ABC-type ATPase/SMC superfamily [Replication, recombination and repair]	Back alignment and domain information

>PRK08903 DnaA regulatory inactivator Hda; Validated	Back alignment and domain information

>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport]	Back alignment and domain information

>PF06160 EzrA: Septation ring formation regulator, EzrA ; InterPro: IPR010379 During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerises into a ring structure that establishes the location of the nascent division site	Back alignment and domain information

>KOG0046 consensus Ca2+-binding actin-bundling protein (fimbrin/plastin), EF-Hand protein superfamily [Cytoskeleton]	Back alignment and domain information

>PF08317 Spc7: Spc7 kinetochore protein; InterPro: IPR013253 This entry consists of cell division proteins which are required for kinetochore-spindle association []	Back alignment and domain information

>PF09787 Golgin_A5: Golgin subfamily A member 5; InterPro: IPR019177 This entry represents a family of proteins involved in maintaining Golgi structure	Back alignment and domain information

>TIGR01242 26Sp45 26S proteasome subunit P45 family	Back alignment and domain information

>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>PF04849 HAP1_N: HAP1 N-terminal conserved region; InterPro: IPR006933 This family is defined by an N-terminal conserved region found in several huntingtin-associated protein 1 (HAP1) homologues	Back alignment and domain information

>KOG0240 consensus Kinesin (SMY1 subfamily) [Cytoskeleton]	Back alignment and domain information

>PRK10865 protein disaggregation chaperone; Provisional	Back alignment and domain information

>TIGR03185 DNA_S_dndD DNA sulfur modification protein DndD	Back alignment and domain information

>cd07671 F-BAR_PSTPIP1 The F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain of Proline-Serine-Threonine Phosphatase-Interacting Protein 1	Back alignment and domain information

>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only]	Back alignment and domain information

>PRK03992 proteasome-activating nucleotidase; Provisional	Back alignment and domain information

>TIGR02928 orc1/cdc6 family replication initiation protein	Back alignment and domain information

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair]	Back alignment and domain information

>TIGR02680 conserved hypothetical protein TIGR02680	Back alignment and domain information

>PF09731 Mitofilin: Mitochondrial inner membrane protein; InterPro: IPR019133 Mitofilin controls mitochondrial cristae morphology	Back alignment and domain information

>PF06548 Kinesin-related: Kinesin-related; InterPro: IPR010544 This entry represents a domain within kinesin-related proteins from higher plants	Back alignment and domain information

>PF15619 Lebercilin: Ciliary protein causing Leber congenital amaurosis disease	Back alignment and domain information

>PRK06526 transposase; Provisional	Back alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Alignment Graph	Length	Definition	E-value
Query		1055
2h58_A		330	Crystal Structure Of The Kifc3 Motor Domain In Comp		3e-77
1sdm_A		369	Crystal Structure Of Kinesin-Like Calmodulin Bindin		1e-67
2ncd_A		420	Ncd (Non-Claret Disjunctional) Dimer From D. Melano		1e-67
1cz7_A		406	The Crystal Structure Of A Minus-End Directed Micro		2e-67
3h4s_A		386	Structure Of The Complex Of A Mitotic Kinesin With		3e-67
1n6m_A		409	Rotation Of The StalkNECK AND ONE HEAD IN A NEW CRY		9e-67
3u06_A		412	Crystal Structure Of The Kinesin-14 Ncdg347d Length		2e-66
1f9t_A		358	Crystal Structures Of Kinesin Mutants Reveal A Sign		2e-66
3l1c_A		383	Kinesin-14 Protein Ncd, T436s Mutant Length = 383		8e-66
4etp_A		403	C-Terminal Motor And Motor Homology Domain Of Kar3v		4e-65
4gkr_A		371	Structure Of The C-Terminal Motor Domain Of Kar3 Fr		5e-65
2rep_A		376	Crystal Structure Of The Motor Domain Of Human Kine		6e-64
3kar_A		346	The Motor Domain Of Kinesin-Like Protein Kar3, A Sa		2e-62
1f9u_A		347	Crystal Structures Of Mutants Reveal A Signalling P		4e-62
1f9w_A		347	Crystal Structures Of Mutants Reveal A Signalling P		4e-62
1f9v_A		347	Crystal Structures Of Mutants Reveal A Signalling P		5e-62
3t0q_A		349	Motor Domain Structure Of The Kar3-Like Kinesin Fro		7e-62
4h1g_A		715	Structure Of Candida Albicans Kar3 Motor Domain Fus		1e-57
3b6u_A		372	Crystal Structure Of The Motor Domain Of Human Kine		1e-56
2y5w_A		365	Crystal Structure Of Drosophila Melanogaster Kinesi		4e-55
1goj_A		355	Structure Of A Fast Kinesin: Implications For Atpas		5e-54
2vvg_A		350	Crystal Structure Of The G.Intestinalis Kinesin 2 G		7e-54
1mkj_A		349	Human Kinesin Motor Domain With Docked Neck Linker		2e-53
1bg2_A		325	Human Ubiquitous Kinesin Motor Domain Length = 325		2e-53
4atx_C		340	Rigor Kinesin Motor Domain With An Ordered Neck-Lin		5e-53
2wbe_C		373	Kinesin-5-Tubulin Complex With Amppnp Length = 373		2e-52
3b6v_A		395	Crystal Structure Of The Motor Domain Of Human Kine		3e-52
3lre_A		355	Crystal Structure Analysis Of Human Kinesin-8 Motor		3e-52
3gbj_A		354	Crystal Structure Of The Motor Domain Of Kinesin Ki		2e-51
4aqv_C		373	Model Of Human Kinesin-5 Motor Domain (3hqd) And Ma		3e-51
1x88_A		359	Human Eg5 Motor Domain Bound To Mg-Adp And Monastro		2e-50
4a1z_A		368	Eg5-1 Length = 368		2e-50
3hqd_A		369	Human Kinesin Eg5 Motor Domain In Complex With Ampp		2e-50
4ap0_A		370	The Mitotic Kinesin Eg5 In Complex With Mg-Adp And		2e-50
1q0b_A		367	Crystal Structure Of The Motor Protein Ksp In Compl		2e-50
4a28_A		368	Eg5-2 Length = 368		2e-50
1ii6_A		368	Crystal Structure Of The Mitotic Kinesin Eg5 In Com		2e-50
3zcw_A		348	Eg5 - New Allosteric Binding Site Length = 348		3e-50
4a14_A		344	Human Kif7, A Kinesin Involved In Hedgehog Signalli		2e-47
1i6i_A		366	Crystal Structure Of The Kif1a Motor Domain Complex		4e-47
1i5s_A		367	Crystal Structure Of The Kif1a Motor Domain Complex		4e-47
1ia0_K		394	Kif1a Head-Microtubule Complex Structure In Atp-For		5e-47
1vfv_A		366	Crystal Structure Of The Kif1a Motor Domain Complex		5e-47
2xt3_A		344	Human Kif7, A Kinesin Involved In Hedgehog Signalli		7e-45
2owm_A		443	Motor Domain Of Neurospora Crassa Kinesin-3 (Nckin3		1e-43
3bfn_A		388	Crystal Structure Of The Motor Domain Of Human Kine		6e-42
3nwn_A		359	Crystal Structure Of The Human Kif9 Motor Domain In		1e-39
1t5c_A		349	Crystal Structure Of The Motor Domain Of Human Kine		4e-38
1v8j_A		410	The Crystal Structure Of The Minimal Functional Dom		3e-37
3edl_D		331	Kinesin13-Microtubule Ring Complex Length = 331		7e-37
2heh_A		387	Crystal Structure Of The Kif2c Motor Domain (Casp T		4e-35
2gry_A		420	Crystal Structure Of The Human Kif2 Motor Domain In		6e-35
3dc4_A		344	Crystal Structure Of The Drosophila Kinesin Family		3e-34
3pxn_A		344	Crystal Structure Of The Drosophila Kinesin Family		3e-34
1ry6_A		360	Crystal Structure Of Internal Kinesin Motor Domain		2e-30
2kin_A		238	Kinesin (Monomeric) From Rattus Norvegicus Length =		2e-27
2kin_B		100	Kinesin (Monomeric) From Rattus Norvegicus Length =		2e-13
3kin_B		117	Kinesin (Dimeric) From Rattus Norvegicus Length = 1		6e-13

>pdb|2H58|A Chain A, Crystal Structure Of The Kifc3 Motor Domain In Complex With Adp Length = 330