Citrus Sinensis ID: 001574
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 1051 | 2.2.26 [Sep-21-2011] | |||||||
| Q84JA6 | 1049 | Cellulose synthase A cata | yes | no | 0.964 | 0.966 | 0.799 | 0.0 | |
| Q9AV71 | 1063 | Cellulose synthase A cata | yes | no | 0.961 | 0.951 | 0.785 | 0.0 | |
| Q69V23 | 1093 | Probable cellulose syntha | no | no | 0.984 | 0.946 | 0.672 | 0.0 | |
| Q9SWW6 | 1026 | Cellulose synthase A cata | no | no | 0.948 | 0.971 | 0.677 | 0.0 | |
| Q851L8 | 1092 | Probable cellulose syntha | no | no | 0.984 | 0.947 | 0.667 | 0.0 | |
| A2XNT2 | 1092 | Probable cellulose syntha | N/A | no | 0.984 | 0.947 | 0.667 | 0.0 | |
| Q69P51 | 1055 | Cellulose synthase A cata | no | no | 0.951 | 0.947 | 0.665 | 0.0 | |
| A2Z1C8 | 1055 | Cellulose synthase A cata | N/A | no | 0.951 | 0.947 | 0.665 | 0.0 | |
| Q6AT26 | 1076 | Probable cellulose syntha | no | no | 0.979 | 0.956 | 0.651 | 0.0 | |
| A2Y0X2 | 1076 | Probable cellulose syntha | N/A | no | 0.979 | 0.956 | 0.651 | 0.0 |
| >sp|Q84JA6|CESA4_ARATH Cellulose synthase A catalytic subunit 4 [UDP-forming] OS=Arabidopsis thaliana GN=CESA4 PE=1 SV=1 | Back alignment and function desciption |
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Score = 1695 bits (4390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 824/1031 (79%), Positives = 898/1031 (87%), Gaps = 17/1031 (1%)
Query: 37 SKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCPGCNTRYKRHKGCA 96
+K+C+VCGDE+ +NG+ FVACH C +PVC+PCYEYERS G++CCP CNT YKRHKG
Sbjct: 20 AKICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCCPQCNTLYKRHKGSP 79
Query: 97 RVAGDEEDNFDDDFEDEFKNHYDNQDHDQHHHVTTTRSENGDNNQNQFLNGPG---SFAG 153
++AGDEE+N DD +DE Y QD H SENGD N Q G S G
Sbjct: 80 KIAGDEENNGPDDSDDELNIKY-RQDGSSIHQNFAYGSENGDYNSKQQWRPNGRAFSSTG 138
Query: 154 SVAGKDFEGDKEGYSSAEWQERVEKWKIRQEKRGLVTKDDGGNDQGDGDDDFLMAE-ARQ 212
SV GKDFE +++GY+ AEW+ERV+KWK RQEKRGLVTK + N+ + D++ + ARQ
Sbjct: 139 SVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQTNEDKEDDEEEYLDAEARQ 198
Query: 213 PLWRKVPIPSSKINPYRIVIILRLFILAFFLRFRILTPAYDAFPLWIISVICEVWFAFSW 272
PLWRKVPI SSKI+PYRIVI+LRL IL FF RFRILTPA DA+PLW+ISVICE+WFA SW
Sbjct: 199 PLWRKVPISSSKISPYRIVIVLRLVILVFFFRFRILTPAKDAYPLWLISVICEIWFALSW 258
Query: 273 ILDQFPKWFPITRETYLDRLSIRFEREGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSI 332
ILDQFPKWFPI RETYLDRLS+RFER+GE N+LAPVDVFVSTVDPLKEPPIITANT+LSI
Sbjct: 259 ILDQFPKWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSI 318
Query: 333 LSMDYPVDKVSCYVSDDGASMLLFDALSETAEFARRWVPFCKKYIIEPRAPEFYFSQKID 392
L++DYPV+KVSCYVSDDGASMLLFD LSET+EFARRWVPFCKKY +EPRAPEFYFS+KID
Sbjct: 319 LAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKID 378
Query: 393 YLKDKVQPTFVKDRRAMKREYEEFKVRINALVSKAQKKPEEGWVMQDGTPWPGNNTRDHP 452
YLKDKVQ TFVKDRRAMKREYEEFKVRINALV+KAQKKPEEGWVMQDGTPWPGNNTRDHP
Sbjct: 379 YLKDKVQTTFVKDRRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHP 438
Query: 453 GMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFIL 512
GMIQVYLG EGA D++G ELPRLVYVSREKRPGY HHKKAGAMNA+VRVSAVLTNAPF+L
Sbjct: 439 GMIQVYLGKEGAFDIDGNELPRLVYVSREKRPGYAHHKKAGAMNAMVRVSAVLTNAPFML 498
Query: 513 NLDCDHYLNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINM 572
NLDCDHY+NNSKA+RE+MCFLMDPQLGKKLCYVQFPQRFDGID +DRYANRNIVFFDINM
Sbjct: 499 NLDCDHYINNSKAIRESMCFLMDPQLGKKLCYVQFPQRFDGIDLNDRYANRNIVFFDINM 558
Query: 573 LGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSK--- 629
GLDGIQGPVYVGTGCVFNR ALYGY+PPVSEKR KMTCDCWPSW CCCCGG ++
Sbjct: 559 RGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRKKMTCDCWPSWICCCCGGGNRNHKSD 618
Query: 630 -------SKKKGDKRGFFSGLYTKKKKMMGKNYVRKGSAPVFDLEEIEEGLEGYDELEKS 682
K K + + K M + R + +FDLE+IEEGLEGYDELEKS
Sbjct: 619 SSKKKSGIKSLFSKLKKKTKKKSDDKTMSSYSRKRSSTEAIFDLEDIEEGLEGYDELEKS 678
Query: 683 SLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEI 742
SLMSQKNFEKRFG SPVFIASTL E+GGLPE TN++SLIKEAIHVISCGYEEKTEWGKEI
Sbjct: 679 SLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEI 738
Query: 743 GWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 802
GWIYGS+TEDILTGF+MHCRGWKSVYC+PKRPAFKGSAPINLSDRLHQVLRWALGSVEIF
Sbjct: 739 GWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 798
Query: 803 LSRHCPLWYGYGGKLKWLERLAYTNTIVYPFTSIPLLAYCTLPAICLLTGKFIIPTLNNL 862
SRHCPLWY +GGKLK LERLAY NTIVYPFTSIPLLAYCT+PA+CLLTGKFIIPT+NN
Sbjct: 799 FSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNF 858
Query: 863 ASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGV 922
ASIWFLALFLSII T +LELRWSGVSI D WRNEQFWVIGGVSAHLFAVFQGLLKVL GV
Sbjct: 859 ASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGV 918
Query: 923 DTNFTVTSKSAEDE--EFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWG 980
DTNFTVTSK A DE EFG+LYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWG
Sbjct: 919 DTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWG 978
Query: 981 PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLLWVRIDPFLPKQK 1040
PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWS+LLASIFSL+WVRIDPFLPKQ
Sbjct: 979 PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQT 1038
Query: 1041 GPLLKQCGVEC 1051
GPLLKQCGV+C
Sbjct: 1039 GPLLKQCGVDC 1049
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Catalytic subunit of cellulose synthase terminal complexes ('rosettes'), required for beta-1,4-glucan microfibril crystallization, a major mechanism of the cell wall formation. Involved in the secondary cell wall formation. Required for the xylem cell wall thickening. Arabidopsis thaliana (taxid: 3702) EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 1EC: 2 |
| >sp|Q9AV71|CESA7_ORYSJ Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA7 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q69V23|CESA3_ORYSJ Probable cellulose synthase A catalytic subunit 3 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA3 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q9SWW6|CESA7_ARATH Cellulose synthase A catalytic subunit 7 [UDP-forming] OS=Arabidopsis thaliana GN=CESA7 PE=1 SV=1 | Back alignment and function description |
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| >sp|Q851L8|CESA5_ORYSJ Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2XNT2|CESA5_ORYSI Probable cellulose synthase A catalytic subunit 5 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA5 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q69P51|CESA9_ORYSJ Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2Z1C8|CESA9_ORYSI Cellulose synthase A catalytic subunit 9 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA9 PE=2 SV=1 | Back alignment and function description |
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| >sp|Q6AT26|CESA1_ORYSJ Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. japonica GN=CESA1 PE=2 SV=1 | Back alignment and function description |
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| >sp|A2Y0X2|CESA1_ORYSI Probable cellulose synthase A catalytic subunit 1 [UDP-forming] OS=Oryza sativa subsp. indica GN=CESA1 PE=2 SV=1 | Back alignment and function description |
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Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1051 | ||||||
| 212960417 | 1049 | cellulose synthase [Betula luminifera] | 0.994 | 0.996 | 0.883 | 0.0 | |
| 183211894 | 1048 | cellulose synthase [Betula platyphylla] | 0.993 | 0.996 | 0.877 | 0.0 | |
| 225438009 | 1044 | PREDICTED: cellulose synthase A catalyti | 0.988 | 0.995 | 0.870 | 0.0 | |
| 332356343 | 1042 | cellulose synthase [Populus tomentosa] | 0.986 | 0.995 | 0.847 | 0.0 | |
| 357449211 | 1039 | Cellulose synthase [Medicago truncatula] | 0.982 | 0.994 | 0.835 | 0.0 | |
| 47078492 | 1042 | cellulose synthase [Populus tremula x Po | 0.986 | 0.995 | 0.843 | 0.0 | |
| 328496823 | 1047 | cellulose synthase catalytic subunit [Eu | 0.985 | 0.989 | 0.840 | 0.0 | |
| 328496821 | 1047 | cellulose synthase catalytic subunit [Eu | 0.985 | 0.989 | 0.841 | 0.0 | |
| 162955782 | 1045 | cellulose synthase [Eucalyptus grandis] | 0.987 | 0.993 | 0.848 | 0.0 | |
| 340343833 | 1045 | cellulose synthase A [Eucalyptus camaldu | 0.987 | 0.993 | 0.847 | 0.0 |
| >gi|212960417|gb|ACJ38666.1| cellulose synthase [Betula luminifera] | Back alignment and taxonomy information |
|---|
Score = 1865 bits (4832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 932/1055 (88%), Positives = 985/1055 (93%), Gaps = 10/1055 (0%)
Query: 1 MASNPM-GSFVAGSHSRNELHVMHANEEQRPPTRQSGSKLCRVCGDEIGLKENGELFVAC 59
MASN M G VAGSH+RNELHV+H ++EQRPPTRQS SK CRVCGDEIG KE+GELFVAC
Sbjct: 1 MASNAMTGGLVAGSHTRNELHVLHGDDEQRPPTRQSVSKTCRVCGDEIGYKEDGELFVAC 60
Query: 60 HECGFPVCRPCYEYERSEGSQCCPGCNTRYKRHKGCARVAGDEEDNFDDDFED---EFKN 116
H CGFPVCRPCY+YERSEG+Q CP CNTRYKR KGC RVAGD+++NFD D D + KN
Sbjct: 61 HVCGFPVCRPCYDYERSEGNQSCPQCNTRYKRQKGCPRVAGDDDENFDADDFDDEFQTKN 120
Query: 117 HYDNQDHDQHHHVTTTRSENGDNNQNQFLNGPGSFAGSVAGKDFEGDKEGYSSAEWQERV 176
H+D D D+ H T SENGD N Q+ GSFAGSVAGKDFEG++E YS+AEW+ER+
Sbjct: 121 HHD--DSDRQH--VTIHSENGDYNHPQW-KPTGSFAGSVAGKDFEGEREAYSNAEWKERI 175
Query: 177 EKWKIRQEKRGLVTKDDGGNDQGDGDDDFLMAEARQPLWRKVPIPSSKINPYRIVIILRL 236
EKWK+RQEKRGLV KDDG NDQGD DDFL+AEARQPLWRKVPI SSKI+PYRIVI+LRL
Sbjct: 176 EKWKVRQEKRGLVNKDDGNNDQGDDQDDFLLAEARQPLWRKVPISSSKISPYRIVIVLRL 235
Query: 237 FILAFFLRFRILTPAYDAFPLWIISVICEVWFAFSWILDQFPKWFPITRETYLDRLSIRF 296
ILAFFLRFR+LTPAYDA+PLWIISVICE WFAFSWILDQFPKWFPITRETYLDRLS+RF
Sbjct: 236 IILAFFLRFRVLTPAYDAYPLWIISVICETWFAFSWILDQFPKWFPITRETYLDRLSMRF 295
Query: 297 EREGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILSMDYPVDKVSCYVSDDGASMLLF 356
EREGEPNRL+PVDVFVSTVDPLKEPPIITANTVLSILS+DYPVDKVSCYVSDDGASMLLF
Sbjct: 296 EREGEPNRLSPVDVFVSTVDPLKEPPIITANTVLSILSVDYPVDKVSCYVSDDGASMLLF 355
Query: 357 DALSETAEFARRWVPFCKKYIIEPRAPEFYFSQKIDYLKDKVQPTFVKDRRAMKREYEEF 416
D LSETAEFARRWVPFC+KY IEPRAPE+YFS+K+DYLKDKV P+FVK+RRAMKREYEEF
Sbjct: 356 DTLSETAEFARRWVPFCRKYSIEPRAPEYYFSEKMDYLKDKVLPSFVKERRAMKREYEEF 415
Query: 417 KVRINALVSKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLV 476
KVRINALV+KAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLV
Sbjct: 416 KVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLV 475
Query: 477 YVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFILNLDCDHYLNNSKAVREAMCFLMDP 536
YVSREKRPGY HHKKAGAMNALVRVSAVLTNAPF+LNLDCDHY+NNSKAVREAMCFLMDP
Sbjct: 476 YVSREKRPGYQHHKKAGAMNALVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDP 535
Query: 537 QLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMLGLDGIQGPVYVGTGCVFNRQALY 596
QLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINM GLDGIQGPVYVGTGCVFNR ALY
Sbjct: 536 QLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMKGLDGIQGPVYVGTGCVFNRPALY 595
Query: 597 GYDPPVSEKRPKMTCDCWPSWCCCCCGGSRKSKSKKKGDKRGFFSGLYTKKKKMMGKNYV 656
GYDPPVSEKRPKMTCDC PSWCCCCCGGSRKSK KKKG RG LYTKKKKMMGKNYV
Sbjct: 596 GYDPPVSEKRPKMTCDCLPSWCCCCCGGSRKSKPKKKGG-RGLLGRLYTKKKKMMGKNYV 654
Query: 657 RKGSAPVFDLEEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTN 716
RKGS +FDLE+IEEGLEGYDELEKSS MSQKNFEKRFGQSPVFIASTL E+GGLPEGT+
Sbjct: 655 RKGSGNMFDLEDIEEGLEGYDELEKSSPMSQKNFEKRFGQSPVFIASTLMEEGGLPEGTS 714
Query: 717 STSLIKEAIHVISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAF 776
TSLIKEAIHVISCGYEEKTEWGKEIGWIYGS+TEDILTGFKMHCRGWKSVYC+PKRPAF
Sbjct: 715 PTSLIKEAIHVISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAF 774
Query: 777 KGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYTNTIVYPFTSI 836
KGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWY YGGKLKWLER+AY NTIVYPFTSI
Sbjct: 775 KGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYAYGGKLKWLERMAYINTIVYPFTSI 834
Query: 837 PLLAYCTLPAICLLTGKFIIPTLNNLASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNE 896
PLLAYCTLPA+CLLTGKFIIPTL NLASI+F+ALFLSII TGVLELRWSGVSIED WRNE
Sbjct: 835 PLLAYCTLPAVCLLTGKFIIPTLTNLASIYFMALFLSIIATGVLELRWSGVSIEDLWRNE 894
Query: 897 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKSAEDEEFGELYLFKWTTLLIPPTTL 956
QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSK+A+D EFGELYLFKWTTLLIPPTTL
Sbjct: 895 QFWVIGGVSAHLFAVFQGLLKVLAGVDTNFTVTSKTADDAEFGELYLFKWTTLLIPPTTL 954
Query: 957 IILNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVL 1016
II+NMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVL
Sbjct: 955 IIMNMVGVVAGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVL 1014
Query: 1017 WSVLLASIFSLLWVRIDPFLPKQKGPLLKQCGVEC 1051
WSVLLASIFSL+WVRIDPFLPKQ GP+LKQCGV+C
Sbjct: 1015 WSVLLASIFSLIWVRIDPFLPKQTGPILKQCGVDC 1049
|
Source: Betula luminifera Species: Betula luminifera Genus: Betula Family: Betulaceae Order: Fagales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|183211894|gb|ACC59197.1| cellulose synthase [Betula platyphylla] | Back alignment and taxonomy information |
|---|
| >gi|225438009|ref|XP_002273521.1| PREDICTED: cellulose synthase A catalytic subunit 4 [UDP-forming]-like [Vitis vinifera] | Back alignment and taxonomy information |
|---|
| >gi|332356343|gb|AEE60895.1| cellulose synthase [Populus tomentosa] | Back alignment and taxonomy information |
|---|
| >gi|357449211|ref|XP_003594882.1| Cellulose synthase [Medicago truncatula] gi|355483930|gb|AES65133.1| Cellulose synthase [Medicago truncatula] | Back alignment and taxonomy information |
|---|
| >gi|47078492|gb|AAT09894.1| cellulose synthase [Populus tremula x Populus tremuloides] | Back alignment and taxonomy information |
|---|
| >gi|328496823|dbj|BAK18577.1| cellulose synthase catalytic subunit [Eucalyptus globulus] | Back alignment and taxonomy information |
|---|
| >gi|328496821|dbj|BAK18576.1| cellulose synthase catalytic subunit [Eucalyptus globulus] | Back alignment and taxonomy information |
|---|
| >gi|162955782|gb|ABY25275.1| cellulose synthase [Eucalyptus grandis] | Back alignment and taxonomy information |
|---|
| >gi|340343833|gb|AEK31216.1| cellulose synthase A [Eucalyptus camaldulensis] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 1051 | ||||||
| TAIR|locus:2172457 | 1049 | CESA4 "cellulose synthase A4" | 0.964 | 0.966 | 0.738 | 0.0 | |
| TAIR|locus:2156789 | 1065 | CEV1 "CONSTITUTIVE EXPRESSION | 0.424 | 0.418 | 0.714 | 0.0 | |
| TAIR|locus:2178935 | 1026 | IRX3 "IRREGULAR XYLEM 3" [Arab | 0.415 | 0.425 | 0.732 | 0.0 | |
| TAIR|locus:2124167 | 985 | IRX1 "IRREGULAR XYLEM 1" [Arab | 0.514 | 0.549 | 0.592 | 0.0 | |
| TAIR|locus:2127776 | 1081 | CESA1 "cellulose synthase 1" [ | 0.418 | 0.407 | 0.705 | 0.0 | |
| TAIR|locus:2176090 | 1084 | CESA6 "cellulose synthase 6" [ | 0.423 | 0.410 | 0.700 | 0.0 | |
| TAIR|locus:2178193 | 1069 | CESA5 "cellulose synthase 5" [ | 0.423 | 0.416 | 0.691 | 0.0 | |
| TAIR|locus:2136308 | 1084 | CESA2 "cellulose synthase A2" | 0.440 | 0.427 | 0.670 | 0.0 | |
| TAIR|locus:2052576 | 1088 | CESA9 "cellulose synthase A9" | 0.423 | 0.409 | 0.685 | 0.0 | |
| TAIR|locus:2040080 | 1065 | CESA10 "cellulose synthase 10" | 0.418 | 0.413 | 0.667 | 0.0 |
| TAIR|locus:2172457 CESA4 "cellulose synthase A4" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 3996 (1411.7 bits), Expect = 0., P = 0.
Identities = 761/1031 (73%), Positives = 827/1031 (80%)
Query: 37 SKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCPGCNTRYKRHKGCA 96
+K+C+VCGDE+ +NG+ FVACH C +PVC+PCYEYERS G++CCP CNT YKRHKG
Sbjct: 20 AKICKVCGDEVKDDDNGQTFVACHVCVYPVCKPCYEYERSNGNKCCPQCNTLYKRHKGSP 79
Query: 97 RVAGXXXXXXXXXXXXXXKXXXXXXXXXXXXXVTTTRSENGD-NNQNQFL-NGPG-SFAG 153
++AG SENGD N++ Q+ NG S G
Sbjct: 80 KIAGDEENNGPDDSDDELNIKYRQDGSSIHQNFAYG-SENGDYNSKQQWRPNGRAFSSTG 138
Query: 154 SVAGKDFEGDKEGYSSAEWQERVEKWKIRQEKRGLVTKXXXXXXXXXXXXX-FLMAEARQ 212
SV GKDFE +++GY+ AEW+ERV+KWK RQEKRGLVTK +L AEARQ
Sbjct: 139 SVLGKDFEAERDGYTDAEWKERVDKWKARQEKRGLVTKGEQTNEDKEDDEEEYLDAEARQ 198
Query: 213 PLWRKVPIPSSKINPYXXXXXXXXXXXXXXXXXXXXTPAYDAFPLWIISVICEVWFAFSW 272
PLWRKVPI SSKI+PY TPA DA+PLW+ISVICE+WFA SW
Sbjct: 199 PLWRKVPISSSKISPYRIVIVLRLVILVFFFRFRILTPAKDAYPLWLISVICEIWFALSW 258
Query: 273 ILDQFPKWFPITRETYLDRLSIRFEREGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSI 332
ILDQFPKWFPI RETYLDRLS+RFER+GE N+LAPVDVFVSTVDPLKEPPIITANT+LSI
Sbjct: 259 ILDQFPKWFPINRETYLDRLSMRFERDGEKNKLAPVDVFVSTVDPLKEPPIITANTILSI 318
Query: 333 LSMDYPVDKVSCYVSDDGASMLLFDALSETAEFARRWVPFCKKYIIEPRAPEFYFSQKID 392
L++DYPV+KVSCYVSDDGASMLLFD LSET+EFARRWVPFCKKY +EPRAPEFYFS+KID
Sbjct: 319 LAVDYPVNKVSCYVSDDGASMLLFDTLSETSEFARRWVPFCKKYNVEPRAPEFYFSEKID 378
Query: 393 YLKDKVQPTFVKDRRAMKREYEEFKVRINALVSKAQKKPEEGWVMQDGTPWPGNNTRDHP 452
YLKDKVQ TFVKDRRAMKREYEEFKVRINALV+KAQKKPEEGWVMQDGTPWPGNNTRDHP
Sbjct: 379 YLKDKVQTTFVKDRRAMKREYEEFKVRINALVAKAQKKPEEGWVMQDGTPWPGNNTRDHP 438
Query: 453 GMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNAPFIL 512
GMIQVYLG EGA D++G ELPRLVYVSREKRPGY HHKKAGAMNA+VRVSAVLTNAPF+L
Sbjct: 439 GMIQVYLGKEGAFDIDGNELPRLVYVSREKRPGYAHHKKAGAMNAMVRVSAVLTNAPFML 498
Query: 513 NLDCDHYLNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINM 572
NLDCDHY+NNSKA+RE+MCFLMDPQLGKKLCYVQFPQRFDGID +DRYANRNIVFFDINM
Sbjct: 499 NLDCDHYINNSKAIRESMCFLMDPQLGKKLCYVQFPQRFDGIDLNDRYANRNIVFFDINM 558
Query: 573 LGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTXXXXXXXXXXXXXXXXXXXXXX 632
GLDGIQGPVYVGTGCVFNR ALYGY+PPVSEKR KMT
Sbjct: 559 RGLDGIQGPVYVGTGCVFNRPALYGYEPPVSEKRKKMTCDCWPSWICCCCGGGNRNHKSD 618
Query: 633 XXXXXXXXXXLYTKKKKMMGK--------NYVRKGSAP--VFXXXXXXXXXXXXXXXXKS 682
L++K KK K +Y RK S+ +F KS
Sbjct: 619 SSKKKSGIKSLFSKLKKKTKKKSDDKTMSSYSRKRSSTEAIFDLEDIEEGLEGYDELEKS 678
Query: 683 SLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEI 742
SLMSQKNFEKRFG SPVFIASTL E+GGLPE TN++SLIKEAIHVISCGYEEKTEWGKEI
Sbjct: 679 SLMSQKNFEKRFGMSPVFIASTLMENGGLPEATNTSSLIKEAIHVISCGYEEKTEWGKEI 738
Query: 743 GWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 802
GWIYGS+TEDILTGF+MHCRGWKSVYC+PKRPAFKGSAPINLSDRLHQVLRWALGSVEIF
Sbjct: 739 GWIYGSVTEDILTGFRMHCRGWKSVYCMPKRPAFKGSAPINLSDRLHQVLRWALGSVEIF 798
Query: 803 LSRHCPLWYGYGGKLKWLERLAYTNTIVYPFTSIPLLAYCTLPAICLLTGKFIIPTLNNL 862
SRHCPLWY +GGKLK LERLAY NTIVYPFTSIPLLAYCT+PA+CLLTGKFIIPT+NN
Sbjct: 799 FSRHCPLWYAWGGKLKILERLAYINTIVYPFTSIPLLAYCTIPAVCLLTGKFIIPTINNF 858
Query: 863 ASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNEQFWVIGGVSAHLFAVFQGLLKVLAGV 922
ASIWFLALFLSII T +LELRWSGVSI D WRNEQFWVIGGVSAHLFAVFQGLLKVL GV
Sbjct: 859 ASIWFLALFLSIIATAILELRWSGVSINDLWRNEQFWVIGGVSAHLFAVFQGLLKVLFGV 918
Query: 923 DTNFTVTSKSAEDE--EFGELYLFKWXXXXXXXXXXXXXNMVGVVAGVSDAINNGYGSWG 980
DTNFTVTSK A DE EFG+LYLFKW NMVGVVAGVSDAINNGYGSWG
Sbjct: 919 DTNFTVTSKGASDEADEFGDLYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWG 978
Query: 981 PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLLWVRIDPFLPKQK 1040
PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWS+LLASIFSL+WVRIDPFLPKQ
Sbjct: 979 PLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIFSLVWVRIDPFLPKQT 1038
Query: 1041 GPLLKQCGVEC 1051
GPLLKQCGV+C
Sbjct: 1039 GPLLKQCGVDC 1049
|
|
| TAIR|locus:2156789 CEV1 "CONSTITUTIVE EXPRESSION OF VSP 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178935 IRX3 "IRREGULAR XYLEM 3" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2124167 IRX1 "IRREGULAR XYLEM 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2127776 CESA1 "cellulose synthase 1" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2176090 CESA6 "cellulose synthase 6" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2178193 CESA5 "cellulose synthase 5" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2136308 CESA2 "cellulose synthase A2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2052576 CESA9 "cellulose synthase A9" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
| TAIR|locus:2040080 CESA10 "cellulose synthase 10" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| A2XN66 | CESA2_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6439 | 0.9429 | 0.9235 | N/A | no |
| A2Z1C8 | CESA9_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6651 | 0.9514 | 0.9478 | N/A | no |
| Q94JQ6 | CESA6_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.7007 | 0.8277 | 0.8025 | no | no |
| Q84JA6 | CESA4_ARATH | 2, ., 4, ., 1, ., 1, 2 | 0.7992 | 0.9647 | 0.9666 | yes | no |
| Q9AV71 | CESA7_ORYSJ | 2, ., 4, ., 1, ., 1, 2 | 0.7859 | 0.9619 | 0.9510 | yes | no |
| A2XNT2 | CESA5_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6672 | 0.9847 | 0.9478 | N/A | no |
| A2Y0X2 | CESA1_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6511 | 0.9790 | 0.9563 | N/A | no |
| A2WV32 | CESA4_ORYSI | 2, ., 4, ., 1, ., 1, 2 | 0.6308 | 0.9191 | 0.9767 | N/A | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 4th Layer | 2.4.1.12 | 0.979 |
| 3rd Layer | 2.4.1 | 0.983 |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
Fail to connect to STRING server
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 1051 | |||
| PLN02915 | 1044 | PLN02915, PLN02915, cellulose synthase A [UDP-form | 0.0 | |
| PLN02436 | 1094 | PLN02436, PLN02436, cellulose synthase A | 0.0 | |
| PLN02638 | 1079 | PLN02638, PLN02638, cellulose synthase A (UDP-form | 0.0 | |
| PLN02189 | 1040 | PLN02189, PLN02189, cellulose synthase | 0.0 | |
| PLN02400 | 1085 | PLN02400, PLN02400, cellulose synthase | 0.0 | |
| PLN02195 | 977 | PLN02195, PLN02195, cellulose synthase A | 0.0 | |
| pfam03552 | 716 | pfam03552, Cellulose_synt, Cellulose synthase | 0.0 | |
| PLN02248 | 1135 | PLN02248, PLN02248, cellulose synthase-like protei | 0.0 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 2e-95 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 6e-91 | |
| PLN02893 | 734 | PLN02893, PLN02893, Cellulose synthase-like protei | 3e-56 | |
| PLN02190 | 756 | PLN02190, PLN02190, cellulose synthase-like protei | 7e-40 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 1e-14 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 5e-14 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 4e-12 | |
| PRK11498 | 852 | PRK11498, bcsA, cellulose synthase catalytic subun | 1e-10 | |
| COG1215 | 439 | COG1215, COG1215, Glycosyltransferases, probably i | 3e-10 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 6e-08 | |
| pfam14446 | 55 | pfam14446, Prok-RING_1, Prokaryotic RING finger fa | 7e-06 | |
| cd06421 | 234 | cd06421, CESA_CelA_like, CESA_CelA_like are involv | 9e-05 | |
| TIGR03030 | 713 | TIGR03030, CelA, cellulose synthase catalytic subu | 1e-04 | |
| cd06423 | 180 | cd06423, CESA_like, CESA_like is the cellulose syn | 4e-04 | |
| PRK14583 | 444 | PRK14583, hmsR, N-glycosyltransferase; Provisional | 8e-04 |
| >gnl|CDD|215494 PLN02915, PLN02915, cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
Score = 2114 bits (5480), Expect = 0.0
Identities = 903/1046 (86%), Positives = 956/1046 (91%), Gaps = 20/1046 (1%)
Query: 24 ANEEQRPPTRQSGS-KLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCC 82
++E RPPTRQS K CRVCGDE+G+KE+G+ FVACH CGFPVC+PCYEYERSEG+QCC
Sbjct: 1 MDDEDRPPTRQSADAKTCRVCGDEVGVKEDGQPFVACHVCGFPVCKPCYEYERSEGNQCC 60
Query: 83 PGCNTRYKRHKGCARVAGDEEDNFD-DDFEDEFKNHYDNQDHDQHHHVTTTRSENGDNNQ 141
P CNTRYKRHKGC RV GD+E+ D DDFEDEF+ QDH+ H SENGD N
Sbjct: 61 PQCNTRYKRHKGCPRVEGDDEEGNDMDDFEDEFQIKS-PQDHEPVHQNVFAGSENGDYNA 119
Query: 142 NQF-LNGPG-SFAGSVAGKDFEGDKEGYSSAEWQERVEKWKIRQEKRGLVTKDDG--GND 197
Q+ GP S GSVAGKD E ++EGY +AEW++RV+KWK RQEKRGLV KDD G+D
Sbjct: 120 QQWRPGGPAFSSTGSVAGKDLEAEREGYGNAEWKDRVDKWKTRQEKRGLVNKDDSDDGDD 179
Query: 198 QGDGDDDFLMAEARQPLWRKVPIPSSKINPYRIVIILRLFILAFFLRFRILTPAYDAFPL 257
+GD ++++L+AEARQPLWRKVPIPSSKINPYRIVI+LRL IL FF RFRILTPAYDA+PL
Sbjct: 180 KGD-EEEYLLAEARQPLWRKVPIPSSKINPYRIVIVLRLVILCFFFRFRILTPAYDAYPL 238
Query: 258 WIISVICEVWFAFSWILDQFPKWFPITRETYLDRLSIRFEREGEPNRLAPVDVFVSTVDP 317
W+ISVICE+WFA SWILDQFPKWFPI RETYLDRLS+RFER+GEPNRLAPVDVFVSTVDP
Sbjct: 239 WLISVICEIWFALSWILDQFPKWFPINRETYLDRLSMRFERDGEPNRLAPVDVFVSTVDP 298
Query: 318 LKEPPIITANTVLSILSMDYPVDKVSCYVSDDGASMLLFDALSETAEFARRWVPFCKKYI 377
LKEPPIITANTVLSIL++DYPVDKVSCYVSDDGASMLLFD LSETAEFARRWVPFCKK+
Sbjct: 299 LKEPPIITANTVLSILAVDYPVDKVSCYVSDDGASMLLFDTLSETAEFARRWVPFCKKHN 358
Query: 378 IEPRAPEFYFSQKIDYLKDKVQPTFVKDRRAMKREYEEFKVRINALVSKAQKKPEEGWVM 437
IEPRAPEFYFSQKIDYLKDKVQPTFVK+RRAMKREYEEFKVRINALV+KAQKKPEEGWVM
Sbjct: 359 IEPRAPEFYFSQKIDYLKDKVQPTFVKERRAMKREYEEFKVRINALVAKAQKKPEEGWVM 418
Query: 438 QDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNA 497
QDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNA
Sbjct: 419 QDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNA 478
Query: 498 LVRVSAVLTNAPFILNLDCDHYLNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRH 557
LVRVSAVLTNAPF+LNLDCDHY+NNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRH
Sbjct: 479 LVRVSAVLTNAPFMLNLDCDHYINNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRH 538
Query: 558 DRYANRNIVFFDINMLGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSW 617
DRYANRN+VFFDINM GLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSW
Sbjct: 539 DRYANRNVVFFDINMKGLDGIQGPVYVGTGCVFNRQALYGYDPPVSEKRPKMTCDCWPSW 598
Query: 618 CCCCCGGSRKSKSK--KKGDK--RGFFSGLYTKKKK------MMGKNYVRKGSAPVFDLE 667
CCCCCGG R+ KSK KKG K R GL +KKK MMGK Y RK S VFDLE
Sbjct: 599 CCCCCGGGRRGKSKKSKKGKKGRRSLLGGLKKRKKKGGGGGSMMGKKYGRKKSQAVFDLE 658
Query: 668 EIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEAIHV 727
EIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTL EDGGLPEGTN +LIKEAIHV
Sbjct: 659 EIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLMEDGGLPEGTNPAALIKEAIHV 718
Query: 728 ISCGYEEKTEWGKEIGWIYGSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPINLSDR 787
ISCGYEEKTEWGKEIGWIYGS+TEDILTGFKMHCRGWKSVYC+PKRPAFKGSAPINLSDR
Sbjct: 719 ISCGYEEKTEWGKEIGWIYGSVTEDILTGFKMHCRGWKSVYCMPKRPAFKGSAPINLSDR 778
Query: 788 LHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYTNTIVYPFTSIPLLAYCTLPAI 847
LHQVLRWALGSVEIF+SRHCPLWY YGGKLKWLERLAY NTIVYPFTSIPLLAYCT+PA+
Sbjct: 779 LHQVLRWALGSVEIFMSRHCPLWYAYGGKLKWLERLAYINTIVYPFTSIPLLAYCTIPAV 838
Query: 848 CLLTGKFIIPTLNNLASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNEQFWVIGGVSAH 907
CLLTGKFIIPTLNNLASIWFLALFLSII T VLELRWSGVSIED WRNEQFWVIGGVSAH
Sbjct: 839 CLLTGKFIIPTLNNLASIWFLALFLSIIATSVLELRWSGVSIEDLWRNEQFWVIGGVSAH 898
Query: 908 LFAVFQGLLKVLAGVDTNFTVTSKSAEDE--EFGELYLFKWTTLLIPPTTLIILNMVGVV 965
LFAVFQGLLKVL GVDTNFTVTSK+A+DE EFGELYLFKWTTLLIPPTTLIILNMVGVV
Sbjct: 899 LFAVFQGLLKVLGGVDTNFTVTSKAADDEADEFGELYLFKWTTLLIPPTTLIILNMVGVV 958
Query: 966 AGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIF 1025
AGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWS+LLASIF
Sbjct: 959 AGVSDAINNGYGSWGPLFGKLFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSILLASIF 1018
Query: 1026 SLLWVRIDPFLPKQKGPLLKQCGVEC 1051
SL+WVRIDPFLPKQ GP+LKQCGVEC
Sbjct: 1019 SLVWVRIDPFLPKQTGPILKQCGVEC 1044
|
Length = 1044 |
| >gnl|CDD|215239 PLN02436, PLN02436, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|215343 PLN02638, PLN02638, cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >gnl|CDD|215121 PLN02189, PLN02189, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215224 PLN02400, PLN02400, cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215124 PLN02195, PLN02195, cellulose synthase A | Back alignment and domain information |
|---|
| >gnl|CDD|217611 pfam03552, Cellulose_synt, Cellulose synthase | Back alignment and domain information |
|---|
| >gnl|CDD|215138 PLN02248, PLN02248, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215483 PLN02893, PLN02893, Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|215122 PLN02190, PLN02190, cellulose synthase-like protein | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|236918 PRK11498, bcsA, cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >gnl|CDD|224136 COG1215, COG1215, Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|222758 pfam14446, Prok-RING_1, Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >gnl|CDD|133043 cd06421, CESA_CelA_like, CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >gnl|CDD|234095 TIGR03030, CelA, cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >gnl|CDD|133045 cd06423, CESA_like, CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >gnl|CDD|184755 PRK14583, hmsR, N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1051 | |||
| PLN02400 | 1085 | cellulose synthase | 100.0 | |
| PLN02436 | 1094 | cellulose synthase A | 100.0 | |
| PLN02915 | 1044 | cellulose synthase A [UDP-forming], catalytic subu | 100.0 | |
| PLN02638 | 1079 | cellulose synthase A (UDP-forming), catalytic subu | 100.0 | |
| PLN02189 | 1040 | cellulose synthase | 100.0 | |
| PLN02195 | 977 | cellulose synthase A | 100.0 | |
| PLN02248 | 1135 | cellulose synthase-like protein | 100.0 | |
| PF03552 | 720 | Cellulose_synt: Cellulose synthase; InterPro: IPR0 | 100.0 | |
| PLN02190 | 756 | cellulose synthase-like protein | 100.0 | |
| PLN02893 | 734 | Cellulose synthase-like protein | 100.0 | |
| TIGR03030 | 713 | CelA cellulose synthase catalytic subunit (UDP-for | 100.0 | |
| PRK11498 | 852 | bcsA cellulose synthase catalytic subunit; Provisi | 100.0 | |
| PF14569 | 80 | zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A. | 100.0 | |
| PRK05454 | 691 | glucosyltransferase MdoH; Provisional | 100.0 | |
| cd04191 | 254 | Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon | 100.0 | |
| COG1215 | 439 | Glycosyltransferases, probably involved in cell wa | 99.97 | |
| PRK14583 | 444 | hmsR N-glycosyltransferase; Provisional | 99.96 | |
| TIGR03111 | 439 | glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0 | 99.95 | |
| PRK11204 | 420 | N-glycosyltransferase; Provisional | 99.95 | |
| PRK14716 | 504 | bacteriophage N4 adsorption protein B; Provisional | 99.93 | |
| cd06421 | 234 | CESA_CelA_like CESA_CelA_like are involved in the | 99.92 | |
| PRK11234 | 727 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.92 | |
| cd06437 | 232 | CESA_CaSu_A2 Cellulose synthase catalytic subunit | 99.91 | |
| cd06427 | 241 | CESA_like_2 CESA_like_2 is a member of the cellulo | 99.89 | |
| cd06435 | 236 | CESA_NdvC_like NdvC_like proteins in this family a | 99.89 | |
| PF13641 | 228 | Glyco_tranf_2_3: Glycosyltransferase like family 2 | 99.86 | |
| PRK15489 | 703 | nfrB bacteriophage N4 adsorption protein B; Provis | 99.82 | |
| cd04190 | 244 | Chitin_synth_C C-terminal domain of Chitin Synthas | 99.81 | |
| TIGR03472 | 373 | HpnI hopanoid biosynthesis associated glycosyl tra | 99.81 | |
| cd04192 | 229 | GT_2_like_e Subfamily of Glycosyltransferase Famil | 99.79 | |
| cd02520 | 196 | Glucosylceramide_synthase Glucosylceramide synthas | 99.77 | |
| cd06434 | 235 | GT2_HAS Hyaluronan synthases catalyze polymerizati | 99.73 | |
| cd06439 | 251 | CESA_like_1 CESA_like_1 is a member of the cellulo | 99.71 | |
| TIGR03469 | 384 | HonB hopene-associated glycosyltransferase HpnB. T | 99.69 | |
| PF13632 | 193 | Glyco_trans_2_3: Glycosyl transferase family group | 99.62 | |
| cd02525 | 249 | Succinoglycan_BP_ExoA ExoA is involved in the bios | 99.61 | |
| COG2943 | 736 | MdoH Membrane glycosyltransferase [Cell envelope b | 99.6 | |
| cd06436 | 191 | GlcNAc-1-P_transferase N-acetyl-glucosamine transf | 99.43 | |
| cd06438 | 183 | EpsO_like EpsO protein participates in the methano | 99.32 | |
| cd04184 | 202 | GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot | 99.27 | |
| cd04195 | 201 | GT2_AmsE_like GT2_AmsE_like is involved in exopoly | 99.21 | |
| PF14570 | 48 | zf-RING_4: RING/Ubox like zinc-binding domain; PDB | 99.14 | |
| PF13506 | 175 | Glyco_transf_21: Glycosyl transferase family 21 | 99.1 | |
| cd06433 | 202 | GT_2_WfgS_like WfgS and WfeV are involved in O-ant | 99.06 | |
| cd02522 | 221 | GT_2_like_a GT_2_like_a represents a glycosyltrans | 98.97 | |
| cd06420 | 182 | GT2_Chondriotin_Pol_N N-terminal domain of Chondro | 98.95 | |
| cd04196 | 214 | GT_2_like_d Subfamily of Glycosyltransferase Famil | 98.95 | |
| cd02510 | 299 | pp-GalNAc-T pp-GalNAc-T initiates the formation of | 98.95 | |
| cd04186 | 166 | GT_2_like_c Subfamily of Glycosyltransferase Famil | 98.9 | |
| PF03142 | 527 | Chitin_synth_2: Chitin synthase; InterPro: IPR0048 | 98.84 | |
| PLN02726 | 243 | dolichyl-phosphate beta-D-mannosyltransferase | 98.83 | |
| cd02526 | 237 | GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr | 98.82 | |
| cd04185 | 202 | GT_2_like_b Subfamily of Glycosyltransferase Famil | 98.82 | |
| PF00535 | 169 | Glycos_transf_2: Glycosyl transferase family 2; In | 98.81 | |
| cd06913 | 219 | beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran | 98.8 | |
| cd06442 | 224 | DPM1_like DPM1_like represents putative enzymes si | 98.72 | |
| cd06423 | 180 | CESA_like CESA_like is the cellulose synthase supe | 98.68 | |
| cd04188 | 211 | DPG_synthase DPG_synthase is involved in protein N | 98.48 | |
| cd04179 | 185 | DPM_DPG-synthase_like DPM_DPG-synthase_like is a m | 98.47 | |
| TIGR01556 | 281 | rhamnosyltran L-rhamnosyltransferase. Rhamnolipids | 98.41 | |
| PRK10073 | 328 | putative glycosyl transferase; Provisional | 98.36 | |
| cd04187 | 181 | DPM1_like_bac Bacterial DPM1_like enzymes are rela | 98.22 | |
| PRK10063 | 248 | putative glycosyl transferase; Provisional | 98.19 | |
| cd00761 | 156 | Glyco_tranf_GTA_type Glycosyltransferase family A | 98.14 | |
| KOG2571 | 862 | consensus Chitin synthase/hyaluronan synthase (gly | 98.12 | |
| PTZ00260 | 333 | dolichyl-phosphate beta-glucosyltransferase; Provi | 98.06 | |
| PRK10018 | 279 | putative glycosyl transferase; Provisional | 98.03 | |
| PF10111 | 281 | Glyco_tranf_2_2: Glycosyltransferase like family 2 | 98.03 | |
| COG1216 | 305 | Predicted glycosyltransferases [General function p | 97.96 | |
| PRK13915 | 306 | putative glucosyl-3-phosphoglycerate synthase; Pro | 97.84 | |
| PRK10714 | 325 | undecaprenyl phosphate 4-deoxy-4-formamido-L-arabi | 97.01 | |
| COG5175 | 480 | MOT2 Transcriptional repressor [Transcription] | 96.69 | |
| COG0463 | 291 | WcaA Glycosyltransferases involved in cell wall bi | 96.69 | |
| KOG2547 | 431 | consensus Ceramide glucosyltransferase [Lipid tran | 96.59 | |
| cd02511 | 229 | Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 | 96.15 | |
| PF14446 | 54 | Prok-RING_1: Prokaryotic RING finger family 1 | 95.39 | |
| TIGR00570 | 309 | cdk7 CDK-activating kinase assembly factor MAT1. A | 95.22 | |
| cd02514 | 334 | GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an es | 93.98 | |
| PF02364 | 817 | Glucan_synthase: 1,3-beta-glucan synthase componen | 90.97 | |
| PF05290 | 140 | Baculo_IE-1: Baculovirus immediate-early protein ( | 89.02 | |
| cd00162 | 45 | RING RING-finger (Really Interesting New Gene) dom | 87.47 | |
| smart00504 | 63 | Ubox Modified RING finger domain. Modified RING fi | 81.14 |
| >PLN02400 cellulose synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-314 Score=2781.98 Aligned_cols=1025 Identities=68% Similarity=1.251 Sum_probs=941.6
Q ss_pred CCCccccccccCCceEEEeecCc-CCCCCCCccCCCcccccCCcccccCCCCeeecccCCCCcccchhhhhhhhcCCCCC
Q 001574 4 NPMGSFVAGSHSRNELHVMHANE-EQRPPTRQSGSKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCC 82 (1051)
Q Consensus 4 ~~~~~~~~g~~~r~~~~~~~~~~-~~~~~~~~~~~~~C~iCgd~vg~~~~G~~fvaC~eC~FpVCR~CyeyerkeG~~~C 82 (1051)
|+++|||||||||||||+|++|+ +++||++++++|+||||||+||+|+|||+|||||||+|||||||||||||||||+|
T Consensus 2 ~~~~glvaGSh~Rnelv~i~~d~~~g~kp~~~~~gqiCqICGD~VG~t~dGe~FVAC~eCaFPVCRpCYEYERkeGnq~C 81 (1085)
T PLN02400 2 EANAGMVAGSYRRNELVRIRHDSDSGPKPLKNLNGQICQICGDDVGVTETGDVFVACNECAFPVCRPCYEYERKDGTQCC 81 (1085)
T ss_pred CCccccccccccccceeeecccccccCCCccccCCceeeecccccCcCCCCCEEEEEccCCCccccchhheecccCCccC
Confidence 68999999999999999999886 44689999999999999999999999999999999999999999999999999999
Q ss_pred CCCccccccccCccccCCCCcCCCCccchhhhccCCCCCCCCccccccccCCCC-----C-CCCCCcccCCCC-------
Q 001574 83 PGCNTRYKRHKGCARVAGDEEDNFDDDFEDEFKNHYDNQDHDQHHHVTTTRSEN-----G-DNNQNQFLNGPG------- 149 (1051)
Q Consensus 83 PqCkt~Ykr~kgsprv~gd~ee~~~dd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~------- 149 (1051)
||||||||||||||||+|||||||+||+||||++++.|++..++ +. +++.+ + .++++|+|++++
T Consensus 82 PQCkTrYkR~KgsprV~GDeeedd~DDlenEf~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~p~lt~g~~~s~ei~ 158 (1085)
T PLN02400 82 PQCKTRYRRHKGSPRVEGDEDEDDVDDLENEFNYAQGNGKARHQ--WQ-GEDIELSSSSRHESQPIPLLTHGQPVSGEIP 158 (1085)
T ss_pred cccCCccccccCCCCCCcccccccchhhhhhhcccccccccccc--cc-ccCccccCcccccCCCCccccCCcccCCCCC
Confidence 99999999999999999999999999999999997554432211 11 11111 0 024567776643
Q ss_pred -----Cc-ccCCC------C-----------------CcccCCCC----CCcchhhhHhHHHHHHHhhhccc-ccc-C--
Q 001574 150 -----SF-AGSVA------G-----------------KDFEGDKE----GYSSAEWQERVEKWKIRQEKRGL-VTK-D-- 192 (1051)
Q Consensus 150 -----~~-~~~~~------~-----------------~~~~~~~~----~~g~~~~~~~~~~wk~~~~~~~~-~~~-~-- 192 (1051)
+| +.++. + ..+|++|| |||||+||||||+||+||+|++. +.+ .
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~vh~~p~~d~~~~~~~~~~d~~~~~~~~g~g~~~wkerv~~wk~~~~k~~~~~~~~~~~ 238 (1085)
T PLN02400 159 CATPDNQSVRTTSGPLGPAERNANSSPYIDPRQPVPVRIVDPSKDLNSYGLGNVDWKERVEGWKLKQDKNMMQMTNKYHE 238 (1085)
T ss_pred CCCCccccccCCcccccccCCcccccCccCcccCCCccccCccccccccccCcHHHHHHHHHHHhhhhhhcccccccccc
Confidence 11 11110 1 13889999 99999999999999999965433 222 1
Q ss_pred C--CC--CCCCCCCchhhhhhhcCCCeeEeecCCCCcchhHHHHHHHHHHHHHHHHHHhhccCCCchhHHHHHHHHHHHH
Q 001574 193 D--GG--NDQGDGDDDFLMAEARQPLWRKVPIPSSKINPYRIVIILRLFILAFFLRFRILTPAYDAFPLWIISVICEVWF 268 (1051)
Q Consensus 193 ~--~~--~~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~yR~~~v~~l~~l~~yl~~Ri~~~~~~~~~lw~~~~~~Ei~f 268 (1051)
| ++ +++.+++|.++|+++++||+||+++++++|+|||++++++|+++++||+||++|++.+++|+|+++++||+||
T Consensus 239 ~~~g~~~~~~~~~~d~~~~~~~~~pL~~~~~i~~~~~~~yR~~~~~~lv~l~~~l~yRi~~~~~~~~~~Wl~s~~cE~wF 318 (1085)
T PLN02400 239 GKGGDMEGTGSNGDELQMADDARLPMSRVVPIPSSRLTPYRIVIILRLIILGFFLQYRVTHPVKDAYGLWLTSVICEIWF 318 (1085)
T ss_pred ccccCCCCCCCCcccccccccccCCceEEEecCccccchHHHHHHHHHHHHHHHHHHHhhccCcccHHHHHHHHHHHHHH
Confidence 1 11 1123356888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhccccccccccchhhhhhhhhhcCCCCCCCCCeeEEEecCCCCCCCHHHHHHHHHHHHcCCCCCCCcEEEEec
Q 001574 269 AFSWILDQFPKWFPITRETYLDRLSIRFEREGEPNRLAPVDVFVSTVDPLKEPPIITANTVLSILSMDYPVDKVSCYVSD 348 (1051)
Q Consensus 269 ~~~wil~q~~kw~Pv~R~t~~drL~~r~~~~~~~~~lp~VDvfV~T~dp~kEpp~v~~nTvls~la~DYP~~kl~~yvsD 348 (1051)
+|+|+|+|++||+||+|+||+|||++||++++++++||+|||||||+||.||||++|+||||||||+|||+|||+|||||
T Consensus 319 af~Wll~q~~Kw~Pv~R~t~~drL~~r~~~~~~~s~LP~vDvFV~TADP~kEPPl~t~NTVLSiLA~DYP~eKlscYvSD 398 (1085)
T PLN02400 319 ALSWLLDQFPKWYPINRETYLDRLALRYDRDGEPSQLAPVDVFVSTVDPLKEPPLVTANTVLSILAVDYPVDKVSCYVSD 398 (1085)
T ss_pred HHHHHHccCcccccccceeCHHHHHHHhccCCCcccCCceeeEeccCCcccCcchHHHHHHHHHHhhcccccceEEEEec
Confidence 99999999999999999999999999999988899999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhHhhHHHHHHhhhhhhhhhhccCCCCCcccccccccccccCCCChhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Q 001574 349 DGASMLLFDALSETAEFARRWVPFCKKYIIEPRAPEFYFSQKIDYLKDKVQPTFVKDRRAMKREYEEFKVRINALVSKAQ 428 (1051)
Q Consensus 349 DG~~~ltf~al~E~a~fA~~WvPFCkk~~iepR~Pe~YFs~k~d~~~~~~~~~f~~err~mkreYee~k~rI~~l~~k~~ 428 (1051)
||+|+||||||.|||+|||+||||||||+|||||||+||++|.|+++++.+|+|++|||+|||||||||+|||+|+++++
T Consensus 399 DGgS~LTf~Al~Eaa~FA~~WvPFCkK~~IepRaPe~YFs~~~~~~~~~~~~~F~~e~~~mK~eYEe~k~RIe~l~~~~~ 478 (1085)
T PLN02400 399 DGSAMLTFEALSETAEFARKWVPFCKKHNIEPRAPEFYFAQKIDYLKDKIQPSFVKERRAMKREYEEFKVRINALVAKAQ 478 (1085)
T ss_pred CCchHHHHHHHHHHHHHHHhhcchhhhcCCCcCCHHHHhccCCCcccCCCchhhHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccCCCCCCCCCCCCCchhhHhhccCCCCccccCCCCCcEEEEeccCCCCCCCCCccchhhHHHHhhccCCCC
Q 001574 429 KKPEEGWVMQDGTPWPGNNTRDHPGMIQVYLGSEGALDVEGKELPRLVYVSREKRPGYNHHKKAGAMNALVRVSAVLTNA 508 (1051)
Q Consensus 429 ~vp~~~w~m~dg~~w~g~~~rdHp~iiqv~l~~~g~~d~~~~~lP~lvYvsRekrpg~~hh~KAGalNallrvSa~~tng 508 (1051)
++|+++|.|+|||+|||+++||||+|||||++++|+.|.+|++||+||||||||||||+||+||||||+|+||||+||||
T Consensus 479 ~~~~~~~~m~dgt~W~g~~~~dHp~iIqVll~~~~~~d~~g~~LP~LVYVSREKRP~~~Hh~KAGAMNaLlRVSavmTNa 558 (1085)
T PLN02400 479 KIPEEGWTMQDGTPWPGNNPRDHPGMIQVFLGHSGGLDTDGNELPRLVYVSREKRPGFQHHKKAGAMNALIRVSAVLTNG 558 (1085)
T ss_pred cCCccccccccCccCCCCCCCCCchhhhhhhcCCCCcccccccCceeEEEeccCCCCCCcchhhhhhHHHHHHhhhhcCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCCChHHHHHHHhhhhcCCCCCCcEEEEecCccccCCCCCCcccchhhhHHHhhcccccCCCCceeeccCc
Q 001574 509 PFILNLDCDHYLNNSKAVREAMCFLMDPQLGKKLCYVQFPQRFDGIDRHDRYANRNIVFFDINMLGLDGIQGPVYVGTGC 588 (1051)
Q Consensus 509 p~il~lDcD~~~~~~~~Lr~amcf~~Dp~~g~~vafVQ~PQ~F~nid~~D~y~n~~~vffdi~~~glDg~qgp~yvGTgc 588 (1051)
|||||||||||+|||+++|+||||||||+.|+++|||||||+|||+|++|||+|||+||||++|+|+||+|||+||||||
T Consensus 559 P~ILNlDCDmY~Nns~a~r~AMCf~lD~~~g~~~afVQFPQrF~gi~~~D~Y~n~~~vffdi~~~GldGlqGP~YvGTGC 638 (1085)
T PLN02400 559 AYLLNVDCDHYFNNSKALKEAMCFMMDPAIGKKTCYVQFPQRFDGIDLHDRYANRNIVFFDINLKGLDGIQGPVYVGTGC 638 (1085)
T ss_pred ceEEecccccccCCchhHHhhhhheeccCCCceeEEEeCCcccCCCCCCCCcccceeEEeeccccccccCCCccccccCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eehhhhhcCCCCCCCCC--CCCCCCCCCCCCCcccCCCCccccccccCCCCcccccchhhhhhccccccccCCCCCccch
Q 001574 589 VFNRQALYGYDPPVSEK--RPKMTCDCWPSWCCCCCGGSRKSKSKKKGDKRGFFSGLYTKKKKMMGKNYVRKGSAPVFDL 666 (1051)
Q Consensus 589 vfRR~ALyg~~p~~~~~--~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 666 (1051)
+|||+||||++||..+. .+.+ .||+||++|+++|+.+... .+.++.. ...+++.+++++
T Consensus 639 ~frR~aLYG~~p~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~---------~~~~~~~---~~~~~~~~~~~~ 699 (1085)
T PLN02400 639 CFNRQALYGYDPVLTEEDLEPNI-------IVKSCCGSRKKGKGSKKYN---------IDKKRAM---KRTESNVPIFNM 699 (1085)
T ss_pred ceeeeeeccCCCccccccccccc-------ccccccccccccccccccc---------ccccccc---cccccccccccc
Confidence 99999999999976533 2222 1355777776654322110 0111111 114567789999
Q ss_pred hHHhhhccchhhhhhhhhhhhhhhhhhcCCcHHHHhhhhhhcCCCCCCCCchhHHHHHHHhhccccccccccccccceec
Q 001574 667 EEIEEGLEGYDELEKSSLMSQKNFEKRFGQSPVFIASTLKEDGGLPEGTNSTSLIKEAIHVISCGYEEKTEWGKEIGWIY 746 (1051)
Q Consensus 667 ~~~~~~~~~~~~~~~~~~~~~~~~~~~fG~s~~f~~s~l~e~GG~~~~~~~~~~~~eA~~V~sc~YE~~T~WGkevGw~y 746 (1051)
+++++|++++++ |++.++++++++++||+|.+|++|++++.||.+...+++++++||+|||||+||++|+||+||||+|
T Consensus 700 ~~~~~~~~~~~~-~~~~~~~~~~l~~~fG~S~~fi~S~~~~~~~~~~~~~~~~ll~eA~~V~sC~YE~~T~WG~evGwiY 778 (1085)
T PLN02400 700 EDIEEGVEGYDD-ERSLLMSQKSLEKRFGQSPVFIAATFMEQGGIPPSTNPATLLKEAIHVISCGYEDKTEWGKEIGWIY 778 (1085)
T ss_pred cccccccccccc-hhhhhhhhhhhhhhccccHHHHHHHHHHhcCCCCCCCcHHHHHHHHHhhccCCccCCchhhhhCeec
Confidence 999999999887 8888999999999999999999999999999998899999999999999999999999999999999
Q ss_pred ccccchHHHHHHHhhCCcEEEEecCCCCcccccCCCCHHHHHHHhhhhhccchhhhhhccCccccccCCCCCcccchhhh
Q 001574 747 GSITEDILTGFKMHCRGWKSVYCVPKRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGYGGKLKWLERLAYT 826 (1051)
Q Consensus 747 gsvTED~~Tg~rL~~rGWrsvY~~p~~~af~G~aP~tl~~~l~QR~RWa~G~iQil~sk~~Pl~~g~~~~Lt~~QRL~Yl 826 (1051)
||+|||+.||++||++||||+|++|++++|.|+||+|+.+++.||+|||+|++||+++++||+++|+.++|+++|||+|+
T Consensus 779 GSvTED~~TG~~LH~rGWrSvY~~p~r~af~GlAP~~l~d~L~Qr~RWA~G~lqI~~sr~nPl~~G~~~~L~l~QRL~Yl 858 (1085)
T PLN02400 779 GSVTEDILTGFKMHARGWISIYCMPPRPAFKGSAPINLSDRLNQVLRWALGSIEILLSRHCPIWYGYNGRLKLLERLAYI 858 (1085)
T ss_pred cceechHHHHHHHHccCCceEecCCCcHhhcCcCCCCHHHHHHHHHHHhhcchheeeccCCccccccCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999998877899999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHhCCcchhccchHHHHHHHHHHHHHHHHHHhhheecCcccccccccchhHHHHHHHH
Q 001574 827 NTIVYPFTSIPLLAYCTLPAICLLTGKFIIPTLNNLASIWFLALFLSIIVTGVLELRWSGVSIEDWWRNEQFWVIGGVSA 906 (1051)
Q Consensus 827 ~~~ly~l~sl~~liylllPil~LltG~~iip~~s~~~~~~fi~lfls~~~~~lLe~~wsG~sl~~wWr~e~~W~I~~vsa 906 (1051)
++++||++++++++|+++|++||++|++++|.++++++++|+++|++++++++||++|+|+++++||||||||+|.++|+
T Consensus 859 ~~~~y~~~slp~liY~llP~l~LltG~~i~P~vs~~~~~~fi~lf~~~~~~~lLE~~~sG~si~~WWrnQq~w~I~~~Sa 938 (1085)
T PLN02400 859 NTIVYPITSIPLLAYCVLPAFCLITNKFIIPEISNYASMWFILLFISIFATGILELRWSGVGIEDWWRNEQFWVIGGTSA 938 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCccCCccchHHHHHHHHHHHHHHHHHHHHHhhcCccHHHhhhccceeeehhhHH
Confidence 99999999999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCeeeCcCCCCc-ccccceeeeccccchHHHHHHHHHHHHHHHHHHHHhHhcCCCCCcchHHH
Q 001574 907 HLFAVFQGLLKVLAGVDTNFTVTSKSAED-EEFGELYLFKWTTLLIPPTTLIILNMVGVVAGVSDAINNGYGSWGPLFGK 985 (1051)
Q Consensus 907 ~lfav~~aLlk~L~g~~~~F~VTpKg~~~-~~~~~ly~f~ws~l~iP~~tLlllnlvaiv~Gi~r~i~~~~~~~~~l~g~ 985 (1051)
++||++++++|+|++++++|.||+|..++ +.++++|+|+||++++|+++++++|++|+++|++++++++++.|++++++
T Consensus 939 ~Lfavl~~ilKvLgg~~~~F~VTsK~~d~~~~~~ely~f~~s~L~iP~ttl~llNlvaiv~Gv~~~i~~g~~~~g~l~~~ 1018 (1085)
T PLN02400 939 HLFAVFQGLLKVLAGIDTNFTVTSKASDEDGDFAELYVFKWTSLLIPPTTVLLVNLVGIVAGVSYAINSGYQSWGPLFGK 1018 (1085)
T ss_pred HHHHHHHHHHHHhcCCcccceecCCcccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHhcccchhhHHHHH
Confidence 99999999999999999999999998764 35789999999999999999999999999999999999888899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHHHHhhheeecCCCCCCCCC-cccccCCCC
Q 001574 986 LFFAFWVIVHLYPFLKGLMGRQNRTPTIVVLWSVLLASIFSLLWVRIDPFLPKQKGP-LLKQCGVEC 1051 (1051)
Q Consensus 986 l~~~~Wvlvnl~Pflkgl~gR~~r~P~~v~~~s~lla~~f~~l~v~i~~~~~~~~~~-~~~~~~~~~ 1051 (1051)
+|+++|+++|+|||++|||||++|+|+||++||++||++||||||+|+||+++++|| ++++|||+|
T Consensus 1019 ~~~~~wvvv~l~Pf~kgL~gR~~r~P~~v~~~s~lla~~~~l~~v~~~~~~~~~~~~~~~~~~~~~~ 1085 (1085)
T PLN02400 1019 LFFAIWVIAHLYPFLKGLLGRQNRTPTIVIVWSILLASIFSLLWVRIDPFVSDTTKAAANGQCGVNC 1085 (1085)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHHHHHHHheeccccccCCCCchhHhhcCcCC
Confidence 999999999999999999999999999999999999999999999999999999999 899999999
|
|
| >PLN02436 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02915 cellulose synthase A [UDP-forming], catalytic subunit | Back alignment and domain information |
|---|
| >PLN02638 cellulose synthase A (UDP-forming), catalytic subunit | Back alignment and domain information |
|---|
| >PLN02189 cellulose synthase | Back alignment and domain information |
|---|
| >PLN02195 cellulose synthase A | Back alignment and domain information |
|---|
| >PLN02248 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PF03552 Cellulose_synt: Cellulose synthase; InterPro: IPR005150 Cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues, is the major component of wood and thus paper, and is synthesized by plants, most algae, some bacteria and fungi, and even some animals | Back alignment and domain information |
|---|
| >PLN02190 cellulose synthase-like protein | Back alignment and domain information |
|---|
| >PLN02893 Cellulose synthase-like protein | Back alignment and domain information |
|---|
| >TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming) | Back alignment and domain information |
|---|
| >PRK11498 bcsA cellulose synthase catalytic subunit; Provisional | Back alignment and domain information |
|---|
| >PF14569 zf-UDP: Zinc-binding RING-finger; PDB: 1WEO_A | Back alignment and domain information |
|---|
| >PRK05454 glucosyltransferase MdoH; Provisional | Back alignment and domain information |
|---|
| >cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan | Back alignment and domain information |
|---|
| >COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >PRK14583 hmsR N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111 | Back alignment and domain information |
|---|
| >PRK11204 N-glycosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK14716 bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose | Back alignment and domain information |
|---|
| >PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex | Back alignment and domain information |
|---|
| >cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase | Back alignment and domain information |
|---|
| >PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A | Back alignment and domain information |
|---|
| >PRK15489 nfrB bacteriophage N4 adsorption protein B; Provisional | Back alignment and domain information |
|---|
| >cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin | Back alignment and domain information |
|---|
| >TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI | Back alignment and domain information |
|---|
| >cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis | Back alignment and domain information |
|---|
| >cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan | Back alignment and domain information |
|---|
| >cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily | Back alignment and domain information |
|---|
| >TIGR03469 HonB hopene-associated glycosyltransferase HpnB | Back alignment and domain information |
|---|
| >PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2 | Back alignment and domain information |
|---|
| >cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan | Back alignment and domain information |
|---|
| >COG2943 MdoH Membrane glycosyltransferase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >cd06436 GlcNAc-1-P_transferase N-acetyl-glucosamine transferase is involved in the synthesis of Poly-beta-1,6-N-acetyl-D-glucosamine | Back alignment and domain information |
|---|
| >cd06438 EpsO_like EpsO protein participates in the methanolan synthesis | Back alignment and domain information |
|---|
| >cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd04195 GT2_AmsE_like GT2_AmsE_like is involved in exopolysaccharide amylovora biosynthesis | Back alignment and domain information |
|---|
| >PF14570 zf-RING_4: RING/Ubox like zinc-binding domain; PDB: 1E4U_A 1UR6_B | Back alignment and domain information |
|---|
| >PF13506 Glyco_transf_21: Glycosyl transferase family 21 | Back alignment and domain information |
|---|
| >cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis | Back alignment and domain information |
|---|
| >cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function | Back alignment and domain information |
|---|
| >cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase | Back alignment and domain information |
|---|
| >cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans | Back alignment and domain information |
|---|
| >cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PF03142 Chitin_synth_2: Chitin synthase; InterPro: IPR004835 Chitin synthase (2 | Back alignment and domain information |
|---|
| >PLN02726 dolichyl-phosphate beta-D-mannosyltransferase | Back alignment and domain information |
|---|
| >cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase | Back alignment and domain information |
|---|
| >cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function | Back alignment and domain information |
|---|
| >PF00535 Glycos_transf_2: Glycosyl transferase family 2; InterPro: IPR001173 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine | Back alignment and domain information |
|---|
| >cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >cd06423 CESA_like CESA_like is the cellulose synthase superfamily | Back alignment and domain information |
|---|
| >cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation | Back alignment and domain information |
|---|
| >cd04179 DPM_DPG-synthase_like DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily | Back alignment and domain information |
|---|
| >TIGR01556 rhamnosyltran L-rhamnosyltransferase | Back alignment and domain information |
|---|
| >PRK10073 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd04187 DPM1_like_bac Bacterial DPM1_like enzymes are related to eukaryotic DPM1 | Back alignment and domain information |
|---|
| >PRK10063 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >cd00761 Glyco_tranf_GTA_type Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold | Back alignment and domain information |
|---|
| >KOG2571 consensus Chitin synthase/hyaluronan synthase (glycosyltransferases) [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >PTZ00260 dolichyl-phosphate beta-glucosyltransferase; Provisional | Back alignment and domain information |
|---|
| >PRK10018 putative glycosyl transferase; Provisional | Back alignment and domain information |
|---|
| >PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ] | Back alignment and domain information |
|---|
| >COG1216 Predicted glycosyltransferases [General function prediction only] | Back alignment and domain information |
|---|
| >PRK13915 putative glucosyl-3-phosphoglycerate synthase; Provisional | Back alignment and domain information |
|---|
| >PRK10714 undecaprenyl phosphate 4-deoxy-4-formamido-L-arabinose transferase; Provisional | Back alignment and domain information |
|---|
| >COG5175 MOT2 Transcriptional repressor [Transcription] | Back alignment and domain information |
|---|
| >COG0463 WcaA Glycosyltransferases involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
| >KOG2547 consensus Ceramide glucosyltransferase [Lipid transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
| >cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide | Back alignment and domain information |
|---|
| >PF14446 Prok-RING_1: Prokaryotic RING finger family 1 | Back alignment and domain information |
|---|
| >TIGR00570 cdk7 CDK-activating kinase assembly factor MAT1 | Back alignment and domain information |
|---|
| >cd02514 GT13_GLCNAC-TI GT13_GLCNAC-TI is involved in an essential step in the synthesis of complex or hybrid-type N-linked oligosaccharides | Back alignment and domain information |
|---|
| >PF02364 Glucan_synthase: 1,3-beta-glucan synthase component ; InterPro: IPR003440 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
| >PF05290 Baculo_IE-1: Baculovirus immediate-early protein (IE-0); InterPro: IPR007954 This entry contains the Baculovirus immediate-early protein IE-0 | Back alignment and domain information |
|---|
| >cd00162 RING RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in mediating protein-protein interactions; identified in a proteins with a wide range of functions such as viral replication, signal transduction, and development; has two variants, the C3HC4-type and a C3H2C3-type (RING-H2 finger), which have different cysteine/histidine pattern; a subset of RINGs are associated with B-Boxes (C-X2-H-X7-C-X7-C-X2-C-H-X2-H) | Back alignment and domain information |
|---|
| >smart00504 Ubox Modified RING finger domain | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 1051 | ||||
| 1weo_A | 93 | Solution Structure Of Ring-Finger In The Catalytic | 4e-19 | ||
| 4hg6_A | 802 | Structure Of A Cellulose Synthase - Cellulose Trans | 5e-07 |
| >pdb|1WEO|A Chain A, Solution Structure Of Ring-Finger In The Catalytic Subunit (Irx3) Of Cellulose Synthase Length = 93 | Back alignment and structure |
|
| >pdb|4HG6|A Chain A, Structure Of A Cellulose Synthase - Cellulose Translocation Intermediate Length = 802 | Back alignment and structure |
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1 Length = 93 | Back alignment and structure |
|---|
Score = 142 bits (358), Expect = 3e-40
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 24 ANEEQRPPTRQSGSKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCP 83
+ P + + C +CGD+IGL G+LFVAC+ECGFP CRPCYEYER EG+Q CP
Sbjct: 3 SGSSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCP 62
Query: 84 GCNTRYKRHKGCARVAGDEEDNFDDD 109
C TRYKR +G RV GDE++ D
Sbjct: 63 QCKTRYKRLRGSPRVEGDEDEEDIDS 88
|
| >1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B Length = 78 | Back alignment and structure |
|---|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
| >2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus} Length = 153 | Back alignment and structure |
|---|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
No hit with probability above 80.00
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 1051 | ||||
| d1weoa_ | 93 | g.44.1.1 (A:) Cellulose synthase A catalytic subun | 1e-42 | |
| d1g25a_ | 65 | g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapi | 0.001 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 93 | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 148 bits (375), Expect = 1e-42
Identities = 46/86 (53%), Positives = 57/86 (66%)
Query: 24 ANEEQRPPTRQSGSKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCP 83
+ P + + C +CGD+IGL G+LFVAC+ECGFP CRPCYEYER EG+Q CP
Sbjct: 3 SGSSGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCP 62
Query: 84 GCNTRYKRHKGCARVAGDEEDNFDDD 109
C TRYKR +G RV GDE++ D
Sbjct: 63 QCKTRYKRLRGSPRVEGDEDEEDIDS 88
|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} Length = 65 | Back information, alignment and structure |
|---|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 1051 | |||
| d1weoa_ | 93 | Cellulose synthase A catalytic subunit 7, IRX3 {Th | 100.0 | |
| d1xhba2 | 328 | Polypeptide N-acetylgalactosaminyltransferase 1, N | 99.49 | |
| d1qg8a_ | 255 | Spore coat polysaccharide biosynthesis protein Sps | 98.87 | |
| d1omza_ | 265 | Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-Ga | 98.49 | |
| d1ur6b_ | 52 | Not-4 N-terminal RING finger domain {Human (Homo s | 94.33 | |
| d1g25a_ | 65 | TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9 | 94.23 | |
| d2bo4a1 | 381 | Mannosylglycerate synthase, MGS {Rhodothermus mari | 92.28 | |
| d1vyxa_ | 60 | IE1B protein (ORF K3), N-terminal domain {Kaposi's | 90.8 | |
| d1chca_ | 68 | Immediate early protein, IEEHV {Equine herpesvirus | 86.99 |
| >d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Small proteins fold: RING/U-box superfamily: RING/U-box family: RING finger domain, C3HC4 domain: Cellulose synthase A catalytic subunit 7, IRX3 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=100.00 E-value=7.3e-40 Score=290.88 Aligned_cols=83 Identities=55% Similarity=1.204 Sum_probs=80.5
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 78998775598755644876434579980110467898612011563662189878888522224468654478976778
Q 001574 27 EQRPPTRQSGSKLCRVCGDEIGLKENGELFVACHECGFPVCRPCYEYERSEGSQCCPGCNTRYKRHKGCARVAGDEEDNF 106 (1051)
Q Consensus 27 ~~~~~~~~~~~~~C~iCgd~vg~~~~G~~fvaC~eC~FpVCR~CyeyerkeG~~~CPqCkt~Ykr~kgsprv~gd~ee~~ 106 (1051)
+++||++++++|+||||||+||+++|||+|||||||+|||||||||||||||+|+|||||||||||||||||+||++|++
T Consensus 6 ~g~kp~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Ykr~kgsprv~gDe~e~~ 85 (93)
T d1weoa_ 6 SGPKPLKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRLRGSPRVEGDEDEED 85 (93)
T ss_dssp SSSSCCSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCCTTCCCCTTSCCCCC
T ss_pred CCCCCHHHCCCCHHHHCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCCCCCCCCCC
T ss_conf 79977345155220115463241789988887523698645078999985167027444872455258987778710014
Q ss_pred CCC
Q ss_conf 763
Q 001574 107 DDD 109 (1051)
Q Consensus 107 ~dd 109 (1051)
+||
T Consensus 86 ~d~ 88 (93)
T d1weoa_ 86 IDS 88 (93)
T ss_dssp SCC
T ss_pred CCC
T ss_conf 346
|
| >d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
| >d1omza_ c.68.1.15 (A:) Alpha-1,4-N-acetylhexosaminyltransferase (Alpha-GalNAcT EXTL2) {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
| >d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
| >d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} | Back information, alignment and structure |
|---|
| >d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]} | Back information, alignment and structure |
|---|
| >d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]} | Back information, alignment and structure |
|---|