Citrus Sinensis ID: 001585

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------105
MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVAEAAKDEEAEDDDDMDGFQTDDEDDDGDGSDKEMGVDAEDGDEADSIRLQKLAAQARAFRPHDEDDDDSDDDFSDDEELQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQALANGVAQHADQRRVEIEKEKVEKASAAATQ
ccHHHHHHHHHHHccccHHHHHHHHHHHHHHHccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHHHHcHHHHHHHHHHHHHHccccccHHHHHHcccHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHcccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHHcHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc
ccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccEccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHccccHHHcccHHHHHHHHHHHHHHcccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcEcccccccHHHHHHHHcccHHHHHHHcccccccccHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHccccHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccHHcccccccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHccccccHHHHHHHHHHHHHHcccHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHcHHcccccccccccccccccHHHHHHcHccccHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccc
MDLPSLALILqgalspnpeerKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKnfiaknwaphepneqqkisqvDKDMVRDHILVFVAQVPPLLRVQLGECLKTIihadypeqwpHLLDWVKHNLQDQQVYGALFVLRILSRkyeyqptdstsmkgyriyefksdeertpvYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSiyleipkqlldpnvFNAWMILFLNVlerpvpsegepadpeqrkswgwwkvKKWTVHILNRLYTrfgdlklqnpenRAFAQMFQKNYAGKILECHLNLLNrirvggylpdRVTNLILQYLSNSisknsmynllqPRLDVLLFEIVFPlmcfndndqklwdedpheyvRKGYDIIedlysprtasMDFVSELVRKRGKENLQKFIQFIVGIFKrydetpveykpyrqkdgALLAIGALCDklkqtepykSELERMLVQhvfpefsspvghlrAKAAWVAGQYAHINFSDQNNFRKALHSVVsglrdpelpvrvDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNtaeadedaddpgaLAAVGCLRAISTILEsvsrlphlfvqieptLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAidffpnilvpldnyisrgtahfltckepdyqQSLWSMVSSIMadknledgdiepapKLIEVVFQNCkgqvdhwvepYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNglrvnfkrehdkkvccLGLTSLLALTadqlpgeaLGRVFRATLDLLVAYKEQVAEAAkdeeaeddddmdgfqtddedddgdgsdkemgvdaedgdeaDSIRLQKLAAQARafrphdeddddsdddfsddeelqspidevdpfvFFVDTIKvmqasdplrfQNLTQTLEFQYQALANGVAQHADQRRVEIEKEKVEKASAAATQ
MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFiaknwaphepnEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKyeyqptdstsmkgyrIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLERPVPSegepadpeqrkswgwwkvKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILesvsrlphlfVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNckgqvdhwvePYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVAeaakdeeaeddddmdgfqtddedddgdgsDKEMGVDAEDGDEADSIRLQKLAAQArafrphdeddddsddDFSDDeelqspidevdpFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQALANGVAQHADQRRVEIEKEKVEkasaaatq
MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTaeadedaddpgalaaVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVaeaakdeeaeddddmdgfqtddedddgdgsdKEMGVDAEDGDEADSIRLQKLAAQARAFRPHdeddddsdddfsddeeLQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQALANGVAQHADQRRVeiekekvekasaaaTQ
****************************NQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAP***********VDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLE****************SWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQ*************************************************************************************EVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQALANGVA************************
MDLPSLALILQGALSPN****KAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLERPVPSEG*****EQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKR*****V*YKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVA**************DGFQTDDEDDDGDGSDKEMGVDAEDGDEADSIRLQKLAAQARAFRPHDEDDDDSDDDFSDDEELQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQALANGVAQ***********************
MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLERPV************KSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVA**************DGFQTD**********************ADSIRLQKLAA************************LQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQALANG********RVEIE*************
MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVAEAAKDE**************************M*VD*E*****DSIRLQKLAAQ********************DEELQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQALANGVAQHADQRRVEIE*************
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MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVAEAAKDEEAEDDDDMDGFQTDDEDDDGDGSDKEMGVDAEDGDEADSIRLQKLAAQARAFRPHDEDDDDSDDDFSDDEELQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQALANGVAQHADQRRVEIEKEKVEKASAAATQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1049 2.2.26 [Sep-21-2011]
Q55CX91065 Probable importin-7 homol yes no 0.926 0.912 0.294 1e-129
O953731038 Importin-7 OS=Homo sapien yes no 0.950 0.960 0.302 1e-120
Q9EPL81038 Importin-7 OS=Mus musculu yes no 0.950 0.960 0.301 1e-120
O153971037 Importin-8 OS=Homo sapien no no 0.951 0.962 0.293 1e-114
Q7TMY71010 Importin-8 OS=Mus musculu no no 0.788 0.818 0.303 1e-110
O598091029 Probable importin c550.11 yes no 0.918 0.936 0.279 1e-107
P469701048 Nonsense-mediated mRNA de yes no 0.652 0.652 0.247 1e-52
Q04175944 Importin beta SMX1 OS=Sac no no 0.718 0.798 0.222 3e-36
Q8SR54939 Probable importin ECU10_0 yes no 0.524 0.585 0.202 6e-18
Q9ERK4971 Exportin-2 OS=Mus musculu no no 0.813 0.878 0.209 1e-17
>sp|Q55CX9|IPO7_DICDI Probable importin-7 homolog OS=Dictyostelium discoideum GN=DDB_G0269860 PE=3 SV=1 Back     alignment and function desciption
 Score =  464 bits (1195), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 309/1050 (29%), Positives = 544/1050 (51%), Gaps = 78/1050 (7%)

Query: 9    ILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAK 68
            + Q  L  +    KAAE  L Q + T  +   LL+I+  N  D+S+RQ  SI  KN I  
Sbjct: 10   LFQHTLHHDANVIKAAEAQLQQIKVTDGYSRILLKILASNEVDISIRQGVSIFLKNMIIT 69

Query: 69   NWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLL 128
             W   E  ++  I+Q D + ++++++  +     L++ Q+   ++ I + D+PE+W  LL
Sbjct: 70   KWRGAE--DESPITQEDAEFIKENLIDLLVHSHHLVQNQIEAMIEIIANRDFPEKWTSLL 127

Query: 129  DWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIVEET 188
                  +  Q V   L  L  +             +K +R Y    D+++  +Y IV E 
Sbjct: 128  PKSIQYINTQDVKLILAGLTSIQ----------LGIKRFR-YVTMGDKKKELLYTIVNEI 176

Query: 189  FHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNV 248
            F  LL I   L Q  + ++E A + K + KIF  +I+ EIP  L+ P VFN W+  F+ +
Sbjct: 177  FPLLLQILEFLSQ--HQTIESALMQKKVIKIFGYAIHFEIPDLLIQPEVFNKWLSQFVRI 234

Query: 249  LERPV-PSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGD--LKLQNPENRAFAQMF 305
            ++RP+ P E      + RK+  WW +K+ T  +LN L+ +         +   +A  ++F
Sbjct: 235  IQRPITPQENVKHADDCRKN-QWWLLKRTTAKLLNLLFRKSATSVRSTDHSSVKALNKLF 293

Query: 306  QKNYAGKILEC---HLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVL 362
               Y+ ++++     L+ L ++  G +  +R    +++Y S +I     Y  ++P L  L
Sbjct: 294  MPVYSVEVMKVFYEQLSTLEQLYKGVHY-ERYQQKLIEYFSFAIKYGVTYVAMKPWLSTL 352

Query: 363  LFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENL 422
            + +++FP++CFND D +LW+ DP+E++R  ++      + R   ++F+ ++V KRG+ NL
Sbjct: 353  IQQVLFPIICFNDRDAELWECDPNEFLRSQFESSMTFATARIEVLNFIIDVVGKRGRANL 412

Query: 423  QKFIQFIVGIFKRYDE-TPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHV 481
               + F +    +Y+  T    K  R+KDG L+ I  L   LK    YKS LE+ML+ HV
Sbjct: 413  DMIMGFCIQSLNKYNAATNASEKNPREKDGVLVIISVLSAYLKNISFYKSNLEQMLLLHV 472

Query: 482  FPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALR 541
            FPE SSP G L+A+A  +  ++ +I F+D   F  AL  ++  + D +LPVRV +  ++ 
Sbjct: 473  FPELSSPHGFLKARACSLFSEFYNIEFTDPVYFSNALKLILGLMSDNDLPVRVKAGTSIC 532

Query: 542  SFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQN 601
            + V A + ++E+RPILPQLLD+ F L++E E+EDLV  +E+I+ +F  E+APYA+ LC+N
Sbjct: 533  NLVRANQGVDELRPILPQLLDKIFSLLSEAESEDLVIAIESIIQRFKHEIAPYAVNLCKN 592

Query: 602  LAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRR 661
            L+  F R +   E+DE  +     A+  CL    T+L ++  +P +F  +E  ++PI+++
Sbjct: 593  LSEQFLRLLELEESDESGE--SGFASQECLGVYCTLLRALKDIPDVFNSLEQQIVPILQK 650

Query: 662  MLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNY 721
            + T+D     +E L I++++T++  +IS  +WSL+P +M    + A DF  + + PLDNY
Sbjct: 651  LFTSDHMMYLDEALRILTFVTYYPKSISPLVWSLFPQIMNLFDECACDFASSYVNPLDNY 710

Query: 722  ISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWV 781
            IS GT +FL+ ++  Y + +++M   ++ D N +  D     K++E + Q  KG++D+ +
Sbjct: 711  ISYGTEYFLSNQQ--YIEMVFNMYKKMVGDINQQPVDAGDCCKIMESLIQRAKGRIDYMI 768

Query: 782  EPYLRITVERLRRAEKSYLK-----CLLVQVIADALYYNSSLTLSILHKLGVATEVFNLW 836
             P L +   RL   +K+  K       L+++IA+ +YYN  ++   L    +   +F LW
Sbjct: 769  VPVLELACGRLLNTDKNNQKSKEFTVYLLEIIANCIYYNPLISTQYLESKNLVEPIFGLW 828

Query: 837  FQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQ-----LPGEALGRVFRATLDL 891
            F  ++         +F+R +DKK+  L  +SLL L              L ++ + T D+
Sbjct: 829  FNRIK---------HFQRFYDKKISVLAFSSLLTLNPSPNFVKFGTSLILEKMLQFTKDM 879

Query: 892  LVAYKEQVAEAAKDEEAEDDDDMDGFQTD--DEDDDGDGSDKEM----------GVDAED 939
            L   KE   + A+ E+   D  +   + +  DE+D+ D  D               D + 
Sbjct: 880  LSIEKELDKQEAEREQKIKDGTLKPEEEEFIDENDEEDYFDNHKFEFEFTEIPDNQDCQH 939

Query: 940  GDEADSIRLQKLAAQARAFRPHDEDDDDSDDD----------------FSDDE--ELQSP 981
             DE + + L  +      F    +  +D  D+                F D++  + ++P
Sbjct: 940  DDEGE-VFLDDIEKATEYFENGGDLGEDEGDNFDDQNDDDDQDSEEDLFEDEDTPDFETP 998

Query: 982  IDEVDPFVFFVDTIKVMQASDPLRFQNLTQ 1011
            IDEVD F F +++I+     +P   Q +++
Sbjct: 999  IDEVDGFEFMINSIQNFFQINPTCIQQISE 1028
May function in nuclear protein import.
Dictyostelium discoideum (taxid: 44689)
>sp|O95373|IPO7_HUMAN Importin-7 OS=Homo sapiens GN=IPO7 PE=1 SV=1 Back     alignment and function description
>sp|Q9EPL8|IPO7_MOUSE Importin-7 OS=Mus musculus GN=Ipo7 PE=1 SV=2 Back     alignment and function description
>sp|O15397|IPO8_HUMAN Importin-8 OS=Homo sapiens GN=IPO8 PE=1 SV=2 Back     alignment and function description
>sp|Q7TMY7|IPO8_MOUSE Importin-8 OS=Mus musculus GN=Ipo8 PE=2 SV=3 Back     alignment and function description
>sp|O59809|IMA3_SCHPO Probable importin c550.11 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC550.11 PE=3 SV=1 Back     alignment and function description
>sp|P46970|NMD5_YEAST Nonsense-mediated mRNA decay protein 5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NMD5 PE=1 SV=2 Back     alignment and function description
>sp|Q04175|SXM1_YEAST Importin beta SMX1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SXM1 PE=1 SV=1 Back     alignment and function description
>sp|Q8SR54|IMPO_ENCCU Probable importin ECU10_0620 OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU10_0620 PE=1 SV=1 Back     alignment and function description
>sp|Q9ERK4|XPO2_MOUSE Exportin-2 OS=Mus musculus GN=Cse1l PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1049
2254337071034 PREDICTED: probable importin-7 homolog [ 0.983 0.998 0.891 0.0
2555736711032 Importin-7, putative [Ricinus communis] 0.982 0.999 0.897 0.0
2960896301080 unnamed protein product [Vitis vinifera] 0.999 0.970 0.869 0.0
3565689051032 PREDICTED: probable importin-7 homolog [ 0.982 0.999 0.875 0.0
2241288921045 predicted protein [Populus trichocarpa] 0.983 0.987 0.877 0.0
3565266251032 PREDICTED: probable importin-7 homolog [ 0.982 0.999 0.872 0.0
2240690641058 predicted protein [Populus trichocarpa] 0.983 0.975 0.855 0.0
3575027571035 Importin-7 [Medicago truncatula] gi|3554 0.982 0.996 0.860 0.0
4494666971029 PREDICTED: probable importin-7 homolog [ 0.980 1.0 0.835 0.0
4495084661029 PREDICTED: probable importin-7 homolog [ 0.980 1.0 0.841 0.0
>gi|225433707|ref|XP_002268048.1| PREDICTED: probable importin-7 homolog [Vitis vinifera] Back     alignment and taxonomy information
 Score = 1863 bits (4825), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 935/1049 (89%), Positives = 985/1049 (93%), Gaps = 17/1049 (1%)

Query: 1    MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASI 60
            MDLPSLA+ILQ ALSPNP++ KAAE SLNQFQYTPQHLVRLLQIIVD NCD++VRQVASI
Sbjct: 1    MDLPSLAVILQAALSPNPDQLKAAEESLNQFQYTPQHLVRLLQIIVDGNCDMAVRQVASI 60

Query: 61   HFKNFIAKNWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADY 120
            HFKNFIAKNW+PHEP+EQQKISQ DK+MVRD+ILV+VAQVPPLLR QLGECLKTI+HADY
Sbjct: 61   HFKNFIAKNWSPHEPDEQQKISQSDKEMVRDNILVYVAQVPPLLRAQLGECLKTIVHADY 120

Query: 121  PEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTP 180
            PEQWP LLDWVKHNLQDQQVYGALFVLRILSRKYE                FKSDEERTP
Sbjct: 121  PEQWPRLLDWVKHNLQDQQVYGALFVLRILSRKYE----------------FKSDEERTP 164

Query: 181  VYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNA 240
            V+RIVEETF HLL IFNRLVQIVNP LEVA+LIKLICKIFWSSIYLEIPKQL DPNVFN+
Sbjct: 165  VHRIVEETFPHLLGIFNRLVQIVNPPLEVAELIKLICKIFWSSIYLEIPKQLFDPNVFNS 224

Query: 241  WMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRA 300
            WMILFLNVLERPVP EG+PADPE RKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRA
Sbjct: 225  WMILFLNVLERPVPLEGQPADPELRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRA 284

Query: 301  FAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLD 360
            FAQMFQKN+AGKILECHLNLLN IR+GGYLPDRV NLILQYLSNSISK SMY LLQPRLD
Sbjct: 285  FAQMFQKNFAGKILECHLNLLNVIRMGGYLPDRVINLILQYLSNSISKMSMYQLLQPRLD 344

Query: 361  VLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKE 420
            VLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTA+MDFVSELVRKR KE
Sbjct: 345  VLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTAAMDFVSELVRKRAKE 404

Query: 421  NLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQH 480
            NL KFIQFIV IFKRYDE  +EYK YRQKDGALLAIGALCDKLKQTEPYKSELE MLVQH
Sbjct: 405  NLHKFIQFIVEIFKRYDEASLEYKAYRQKDGALLAIGALCDKLKQTEPYKSELEHMLVQH 464

Query: 481  VFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFAL 540
            VFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFAL
Sbjct: 465  VFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFAL 524

Query: 541  RSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQ 600
            RSFVEAC+DLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQ
Sbjct: 525  RSFVEACKDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQ 584

Query: 601  NLAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMR 660
            NLAAAFWRCMNTAEAD++ADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMR
Sbjct: 585  NLAAAFWRCMNTAEADDEADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMR 644

Query: 661  RMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDN 720
            RMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDN
Sbjct: 645  RMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDN 704

Query: 721  YISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHW 780
            YISR TAHFLTCK+P+YQQSLW M+S+IM D+N+ED DIEPAPKLIEVVFQNC+GQVD W
Sbjct: 705  YISRSTAHFLTCKDPNYQQSLWDMISTIMPDRNMEDSDIEPAPKLIEVVFQNCRGQVDQW 764

Query: 781  VEPYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQML 840
            VEPYLRITVERLRRAEK YLKCLL+QVIADALYYN++LTLSILHKLGVATE+F LWFQML
Sbjct: 765  VEPYLRITVERLRRAEKPYLKCLLIQVIADALYYNAALTLSILHKLGVATEIFGLWFQML 824

Query: 841  QQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQV- 899
            QQVKK+G+R NFKREHDKKVCCLGLTSLLAL ADQLPGEALGR+FRATLDLLVAYK+QV 
Sbjct: 825  QQVKKSGVRANFKREHDKKVCCLGLTSLLALPADQLPGEALGRIFRATLDLLVAYKDQVA 884

Query: 900  AEAAKDEEAEDDDDMDGFQTDDEDDDGDGSDKEMGVDAEDGDEADSIRLQKLAAQARAFR 959
              A ++E  +DDDDMDGFQTDDED+DGDGSDKEMG DAEDGDEADSIRLQKLAAQA+  R
Sbjct: 885  EAAKEEEAEDDDDDMDGFQTDDEDEDGDGSDKEMGFDAEDGDEADSIRLQKLAAQAKDLR 944

Query: 960  PHDEDDDDSDDDFSDDEELQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQA 1019
            P+DEDDDDSD+D+SDDEELQSPIDEVDPF+FFVDT+K MQASDPLR QNLTQTL+F YQA
Sbjct: 945  PNDEDDDDSDNDYSDDEELQSPIDEVDPFIFFVDTVKAMQASDPLRLQNLTQTLDFHYQA 1004

Query: 1020 LANGVAQHADQRRVEIEKEKVEKASAAAT 1048
            LANGVAQHA+QRRVEIEKEK+EKASA   
Sbjct: 1005 LANGVAQHAEQRRVEIEKEKMEKASAGGA 1033

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|255573671|ref|XP_002527757.1| Importin-7, putative [Ricinus communis] gi|223532844|gb|EEF34618.1| Importin-7, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|296089630|emb|CBI39449.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356568905|ref|XP_003552648.1| PREDICTED: probable importin-7 homolog [Glycine max] Back     alignment and taxonomy information
>gi|224128892|ref|XP_002320447.1| predicted protein [Populus trichocarpa] gi|222861220|gb|EEE98762.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|356526625|ref|XP_003531917.1| PREDICTED: probable importin-7 homolog [Glycine max] Back     alignment and taxonomy information
>gi|224069064|ref|XP_002302891.1| predicted protein [Populus trichocarpa] gi|222844617|gb|EEE82164.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|357502757|ref|XP_003621667.1| Importin-7 [Medicago truncatula] gi|355496682|gb|AES77885.1| Importin-7 [Medicago truncatula] Back     alignment and taxonomy information
>gi|449466697|ref|XP_004151062.1| PREDICTED: probable importin-7 homolog [Cucumis sativus] Back     alignment and taxonomy information
>gi|449508466|ref|XP_004163320.1| PREDICTED: probable importin-7 homolog [Cucumis sativus] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1049
TAIR|locus:20659391040 SAD2 "AT2G31660" [Arabidopsis 0.968 0.976 0.736 0.0
TAIR|locus:20777151030 AT3G59020 "AT3G59020" [Arabido 0.960 0.978 0.679 0.0
DICTYBASE|DDB_G02698601065 DDB_G0269860 "putative importi 0.793 0.781 0.310 9.4e-122
FB|FBgn00262521049 msk "moleskin" [Drosophila mel 0.817 0.817 0.298 2.9e-114
UNIPROTKB|E2R7031036 IPO8 "Uncharacterized protein" 0.822 0.833 0.302 2.1e-111
ZFIN|ZDB-GENE-030131-4581039 ipo7 "importin 7" [Danio rerio 0.803 0.811 0.311 2.7e-111
UNIPROTKB|E1BGE51038 IPO7 "Uncharacterized protein" 0.947 0.957 0.287 6.8e-111
UNIPROTKB|F6X4J21038 IPO7 "Uncharacterized protein" 0.947 0.957 0.287 6.8e-111
UNIPROTKB|O953731038 IPO7 "Importin-7" [Homo sapien 0.947 0.957 0.287 6.8e-111
MGI|MGI:21524141038 Ipo7 "importin 7" [Mus musculu 0.947 0.957 0.287 6.8e-111
TAIR|locus:2065939 SAD2 "AT2G31660" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3968 (1401.9 bits), Expect = 0., P = 0.
 Identities = 764/1037 (73%), Positives = 862/1037 (83%)

Query:     1 MDLPSLALILQ-GALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVAS 59
             MDL SLALIL+  ALSP P+ERK +E  LNQ ++TPQHLVRLLQI VD NCD++VRQ+AS
Sbjct:     1 MDLHSLALILRTAALSPIPDERKVSEQQLNQLEHTPQHLVRLLQIAVDGNCDMAVRQIAS 60

Query:    60 IHFKNFIAKNWAPHE--PN-EQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTII 116
             I FKN IAKNW+P +  P   QQ+I + DK++VRD+ILV+V QVP LLR QLGE LKTII
Sbjct:    61 IQFKNLIAKNWSPEDCGPAVRQQQIFESDKELVRDNILVYVTQVPTLLRSQLGESLKTII 120

Query:   117 HADYPEQWPHLLDWVKHNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDE 176
             +ADYPEQWP LLDWVK+NLQ+QQ+YGALFVLRILSRKYE                FKSDE
Sbjct:   121 YADYPEQWPRLLDWVKYNLQNQQIYGALFVLRILSRKYE----------------FKSDE 164

Query:   177 ERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPN 236
             ERTPV RIVEETF  LL IFN L+QI NPSLE+A+L+KLICKIFWSSIYLE+P+QL D N
Sbjct:   165 ERTPVSRIVEETFPQLLTIFNGLIQIPNPSLEIAELMKLICKIFWSSIYLELPRQLFDLN 224

Query:   237 VFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNP 296
             VFNAWM+LFL+V ERPVP EG+P DPE RKSWGWWKVKKWTVHILNRLY+RFGD KLQ+P
Sbjct:   225 VFNAWMVLFLSVSERPVPVEGQPMDPELRKSWGWWKVKKWTVHILNRLYSRFGDPKLQSP 284

Query:   297 ENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQ 356
             EN+ FAQMFQKNYAG+ILE HLN LN IRVGGYLPDRV NL+LQYLSNSISKNSMY LL 
Sbjct:   285 ENKPFAQMFQKNYAGRILEGHLNFLNTIRVGGYLPDRVINLLLQYLSNSISKNSMYKLLL 344

Query:   357 PRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRK 416
             PRLDVLLFEIVFPLMCFNDNDQKLW+EDPHEYVRKGY+IIEDLYSPRTASMDFV+ELVRK
Sbjct:   345 PRLDVLLFEIVFPLMCFNDNDQKLWEEDPHEYVRKGYNIIEDLYSPRTASMDFVNELVRK 404

Query:   417 RGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERM 476
             RGKENL KF++F+V IF  Y++  VE KPYRQKDGA+LA+GALCDKLKQT+PYKS+LE M
Sbjct:   405 RGKENLPKFVKFVVEIFLSYEKATVEEKPYRQKDGAMLAVGALCDKLKQTDPYKSQLELM 464

Query:   477 LVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDS 536
             LVQH+FP+F+SPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDP+LPVRVDS
Sbjct:   465 LVQHIFPDFNSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPDLPVRVDS 524

Query:   537 VFALRSFVEACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYAL 596
             VFALRSFVEAC+DLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAP+A 
Sbjct:   525 VFALRSFVEACKDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPFAF 584

Query:   597 GLCQNLAAAFWRCMNTXXXXXXXXXXXXXXXVGCLRAISTILESVSRLPHLFVQIEPTLL 656
             GLCQNLAAAFWRC+NT               VGCLRAISTILESVS LP LFV+IEPT+L
Sbjct:   585 GLCQNLAAAFWRCLNTSEANDDSDDMGALAAVGCLRAISTILESVSSLPQLFVEIEPTIL 644

Query:   657 PIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNILV 716
             PIM++MLTTDGQEVFEEVLEI SYMTF+SP+ISL++WSLWPLM+EAL DW IDFFPNILV
Sbjct:   645 PIMQKMLTTDGQEVFEEVLEIASYMTFYSPSISLDIWSLWPLMVEALVDWGIDFFPNILV 704

Query:   717 PLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQ 776
             P+DN+ISRGTAHFLTCKEPDYQQSL++++S++M D+N+ED +IE APKLIEVVFQNCKGQ
Sbjct:   705 PMDNFISRGTAHFLTCKEPDYQQSLYNVLSTLMTDRNIEDSEIESAPKLIEVVFQNCKGQ 764

Query:   777 VDHWVEPYLRITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLW 836
             VD WVEPYLR+TV+RL+RAE SY+K LL+QV+A+ LYYN  LTL +LH  G+A++VF+LW
Sbjct:   765 VDQWVEPYLRLTVDRLQRAETSYVKSLLIQVVANMLYYNPGLTLGVLHNTGLASKVFDLW 824

Query:   837 FQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYK 896
             FQMLQQ +K+GL  NFKREHDKKVCCLGLTSLLAL   Q P EAL RVFRATLDLLVAYK
Sbjct:   825 FQMLQQKRKSGLPANFKREHDKKVCCLGLTSLLALPGGQFPDEALQRVFRATLDLLVAYK 884

Query:   897 EQVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEMGVDAEDGDEADSIRLQKLAAQAR 956
              Q+                                EM  D E+GDEA S++LQKLAAQA+
Sbjct:   885 NQLAEAAKETEVDYEEEMNGLQSSDDDYDDDGSDGEMD-DTEEGDEAQSVKLQKLAAQAK 943

Query:   957 AFRPHXXXXXXXXXXXXXXXXLQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQ 1016
             AF                    QSPIDEVD FVFFVD I+VMQASD  RFQNL Q+L+F 
Sbjct:   944 AFHYDDDDDDDSDDDFSDEDEFQSPIDEVDAFVFFVDAIRVMQASDAQRFQNLNQSLDFT 1003

Query:  1017 YQALANGVAQHADQRRV 1033
             YQA+ANG+AQHA+ RRV
Sbjct:  1004 YQAIANGIAQHAELRRV 1020
GO:0000059 "protein import into nucleus, docking" evidence=ISS
GO:0005634 "nucleus" evidence=ISS;IDA
GO:0005643 "nuclear pore" evidence=ISS
GO:0005737 "cytoplasm" evidence=ISS;IDA
GO:0008565 "protein transporter activity" evidence=IEA;ISS
GO:0006606 "protein import into nucleus" evidence=RCA;IDA
GO:0005829 "cytosol" evidence=IDA
GO:0035280 "miRNA loading onto RISC involved in gene silencing by miRNA" evidence=IMP
GO:0006406 "mRNA export from nucleus" evidence=RCA
GO:0009165 "nucleotide biosynthetic process" evidence=RCA
TAIR|locus:2077715 AT3G59020 "AT3G59020" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0269860 DDB_G0269860 "putative importin 7" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
FB|FBgn0026252 msk "moleskin" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
UNIPROTKB|E2R703 IPO8 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-458 ipo7 "importin 7" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BGE5 IPO7 "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
UNIPROTKB|F6X4J2 IPO7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O95373 IPO7 "Importin-7" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:2152414 Ipo7 "importin 7" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q9EPL8IPO7_MOUSENo assigned EC number0.30160.95040.9605yesno
O95373IPO7_HUMANNo assigned EC number0.30260.95040.9605yesno

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1049
COG5656970 COG5656, SXM1, Importin, protein involved in nucle 1e-113
COG5657947 COG5657, CSE1, CAS/CSE protein involved in chromos 2e-15
pfam0381071 pfam03810, IBN_N, Importin-beta N-terminal domain 3e-13
smart0091367 smart00913, IBN_N, Importin-beta N-terminal domain 3e-10
pfam04147 809 pfam04147, Nop14, Nop14-like family 2e-05
pfam09073424 pfam09073, BUD22, BUD22 3e-05
TIGR01651 600 TIGR01651, CobT, cobaltochelatase, CobT subunit 2e-04
pfam10446 449 pfam10446, DUF2457, Protein of unknown function (D 3e-04
pfam05285317 pfam05285, SDA1, SDA1 6e-04
pfam04147 809 pfam04147, Nop14, Nop14-like family 8e-04
PTZ00482 844 PTZ00482, PTZ00482, membrane-attack complex/perfor 0.001
pfam10446 449 pfam10446, DUF2457, Protein of unknown function (D 0.002
PRK14891131 PRK14891, PRK14891, 50S ribosomal protein L24e/unk 0.002
pfam09538104 pfam09538, FYDLN_acid, Protein of unknown function 0.003
pfam09538104 pfam09538, FYDLN_acid, Protein of unknown function 0.004
>gnl|CDD|227943 COG5656, SXM1, Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information 
 Score =  372 bits (956), Expect = e-113
 Identities = 232/1023 (22%), Positives = 423/1023 (41%), Gaps = 100/1023 (9%)

Query: 14   LSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNW--- 70
            L  +  +R  AE  L   +  P  ++ LL I   +  DL+V+  A+I+FKN I ++W   
Sbjct: 13   LDADAGKRTIAEAMLKDLEKQPGFVMALLHICSKDEGDLNVKLSAAIYFKNKIIRSWSSK 72

Query: 71   --APHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLL 128
                 + +E+ +     K  + ++IL      P + R  L   L  I   D P     L 
Sbjct: 73   RDDGIKADEKSEA----KKYLIENILDVFLYSPEVTRTALNAILVNIFSEDKPSDLWGLF 128

Query: 129  DWVK---HNLQDQQVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEERTPVYRIV 185
                    + +   VY  L  L  L                ++ Y +K ++E+  +  ++
Sbjct: 129  PKAANLLRSSEANHVYTGLLCLEEL----------------FKAYRWKYNDEQVDILMLI 172

Query: 186  EETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILF 245
               F  L  +   L    N      + + LI K F S  Y  +P  L     F++W  L 
Sbjct: 173  TALFPILEKVGGNLESQGN--YGSVETLMLILKSFKSVCYYSLPDFLSAIETFSSWFQLS 230

Query: 246  LNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMF 305
            L +L++P+P+E    DPE R    W K KKW  + L R + R+     +     +F   F
Sbjct: 231  LRILQKPLPNEVLSLDPEVRSLSKWVKCKKWAAYNLYRSFQRYIKKSYKKSY-LSFYITF 289

Query: 306  QKNYAGKILECHLNLLNRIRVGG-YLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLF 364
                   IL      +     G  +L D     I  ++   +  +  + L++P L  ++ 
Sbjct: 290  M-TRVPMILATFFKQIEEWGQGQLWLSDIELYFIDFFVELCVDADQTWRLMEPHLQYIIS 348

Query: 365  EIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQK 424
             ++FPL+C ++ +++L++ DP EY+R+ YD  ++  SP  A++ F+     KR +E  Q 
Sbjct: 349  GVIFPLLCLSEEEEELFENDPDEYIRRYYDFFDNGLSPDLAALFFLIISKSKRKEETFQG 408

Query: 425  FIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERMLVQHVFPE 484
             + F++ I  +   TP      RQ +GAL  + ++   + +  P  + +E  +V HV P 
Sbjct: 409  ILSFLLSILGQSAATPSNIDNARQAEGALRLLASIKSFITKMSPAANVMEYFIVNHVIPA 468

Query: 485  FSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVFALRSFV 544
            F S  G L+++A          +F D     +A  +  + L++  LPV +++  AL+ F+
Sbjct: 469  FRSNYGFLKSRACEFISTIE-EDFKDNGILLEAYENTHNCLKNNHLPVMIEAALALQFFI 527

Query: 545  EACRDLNEIRPILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAA 604
               +   +    +P+ +++   L N  E + L   +E+ V+ F EE++P+A  L  +L  
Sbjct: 528  FNEQSHEKFSAHVPETMEKLLSLSNTFEIDPLSMVMESFVEYFSEELSPFAPELAGSLVR 587

Query: 605  AFWRC-----MNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIM 659
             F +       N+++     DD   +AA G LR I +++ S+   P +   +E +L P++
Sbjct: 588  QFLKIAQSLLENSSDTSSVVDDK-QMAASGILRTIESMILSLENRPLVLKYLEVSLYPVI 646

Query: 660  RRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADW-AIDFFPNILVPL 718
              +L  +  + ++E L+I+   TF S  I   MW ++ L++  L D     +   +   L
Sbjct: 647  SFILKNEISDFYQEALDILDGYTFMSKEIEPIMWGIFELLLNLLIDEITAVYSEEVADAL 706

Query: 719  DNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVD 778
            DN+I+ G   F+      Y      +    +  +     D     ++IE +  N + ++ 
Sbjct: 707  DNFITYGKTEFM--DAGIYGSICSEISKLCLCSEENFLEDFIGVCRIIESLILNIRDELL 764

Query: 779  HWVEPYLR---ITVERLRRAEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNL 835
                P       +  ++           L ++I + L      TL IL + G     F  
Sbjct: 765  SQYLPLFISVAGSGLKMIDELGPASVYAL-ELIINNLILRPKETLQILEEQGYLQSFFEK 823

Query: 836  WFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGE----ALGRVFRATLDL 891
            WF  +           FKR HDKK+  L + +++ L       E     LG V  A +  
Sbjct: 824  WFSQIP---------KFKRVHDKKLSVLAILTIIRLQEVGALPELLVHNLGEVLVALVTS 874

Query: 892  LVAYKEQVAEAAKDEEAEDDDDMDGFQTDDEDDDGDGSDKEMGVDAEDGDEADSIRLQKL 951
            L       A+   DE+  + D      T+ ++           VDA D  E         
Sbjct: 875  LPEAIRLRAKEKDDEDFPEPD----LTTEYDE----------CVDASDISETF------- 913

Query: 952  AAQARAFRPHDEDDDDSDDDFSDDEELQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQ 1011
                        ++D            ++ +D+VDPF +F + +  +Q +    ++ +  
Sbjct: 914  ----------ILEEDPL---------FETELDQVDPFGYFSEFLSNLQPASGTYYEKIIS 954

Query: 1012 TLE 1014
            TL 
Sbjct: 955  TLT 957

Length = 970
>gnl|CDD|227944 COG5657, CSE1, CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning] Back     alignment and domain information
>gnl|CDD|217743 pfam03810, IBN_N, Importin-beta N-terminal domain Back     alignment and domain information
>gnl|CDD|197981 smart00913, IBN_N, Importin-beta N-terminal domain Back     alignment and domain information
>gnl|CDD|217927 pfam04147, Nop14, Nop14-like family Back     alignment and domain information
>gnl|CDD|220102 pfam09073, BUD22, BUD22 Back     alignment and domain information
>gnl|CDD|130712 TIGR01651, CobT, cobaltochelatase, CobT subunit Back     alignment and domain information
>gnl|CDD|220759 pfam10446, DUF2457, Protein of unknown function (DUF2457) Back     alignment and domain information
>gnl|CDD|218538 pfam05285, SDA1, SDA1 Back     alignment and domain information
>gnl|CDD|217927 pfam04147, Nop14, Nop14-like family Back     alignment and domain information
>gnl|CDD|240433 PTZ00482, PTZ00482, membrane-attack complex/perforin (MACPF) Superfamily; Provisional Back     alignment and domain information
>gnl|CDD|220759 pfam10446, DUF2457, Protein of unknown function (DUF2457) Back     alignment and domain information
>gnl|CDD|184885 PRK14891, PRK14891, 50S ribosomal protein L24e/unknown domain fusion protein; Provisional Back     alignment and domain information
>gnl|CDD|220284 pfam09538, FYDLN_acid, Protein of unknown function (FYDLN_acid) Back     alignment and domain information
>gnl|CDD|220284 pfam09538, FYDLN_acid, Protein of unknown function (FYDLN_acid) Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1049
KOG19911010 consensus Nuclear transport receptor RANBP7/RANBP8 100.0
COG5656970 SXM1 Importin, protein involved in nuclear import 100.0
KOG1992960 consensus Nuclear export receptor CSE1/CAS (import 100.0
KOG1993978 consensus Nuclear transport receptor KAP120 (impor 100.0
KOG22741005 consensus Predicted importin 9 [Intracellular traf 100.0
COG5657947 CSE1 CAS/CSE protein involved in chromosome segreg 100.0
KOG2023885 consensus Nuclear transport receptor Karyopherin-b 100.0
KOG2171 1075 consensus Karyopherin (importin) beta 3 [Nuclear s 100.0
PF08506370 Cse1: Cse1; InterPro: IPR013713 The exchange of ma 100.0
PF03378435 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I 100.0
KOG1241859 consensus Karyopherin (importin) beta 1 [Nuclear s 100.0
COG5215858 KAP95 Karyopherin (importin) beta [Intracellular t 100.0
KOG2022982 consensus Nuclear transport receptor LGL2 (importi 99.9
COG51011053 CRM1 Importin beta-related nuclear transport recep 99.79
KOG21711075 consensus Karyopherin (importin) beta 3 [Nuclear s 99.76
KOG2021980 consensus Nuclear mRNA export factor receptor LOS1 99.65
KOG2081559 consensus Nuclear transport regulator [Intracellul 99.59
KOG19911010 consensus Nuclear transport receptor RANBP7/RANBP8 99.47
KOG2023885 consensus Nuclear transport receptor Karyopherin-b 99.43
KOG1241859 consensus Karyopherin (importin) beta 1 [Nuclear s 99.42
PF0381077 IBN_N: Importin-beta N-terminal domain; InterPro: 99.33
KOG20201041 consensus Nuclear transport receptor CRM1/MSN5 (im 99.17
COG5215858 KAP95 Karyopherin (importin) beta [Intracellular t 99.15
KOG1824 1233 consensus TATA-binding protein-interacting protein 99.0
KOG1824 1233 consensus TATA-binding protein-interacting protein 98.97
PF08389148 Xpo1: Exportin 1-like protein; InterPro: IPR013598 98.66
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 98.14
KOG0915 1702 consensus Uncharacterized conserved protein [Funct 97.98
KOG02131172 consensus Splicing factor 3b, subunit 1 [RNA proce 97.98
PTZ00429746 beta-adaptin; Provisional 97.9
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 97.8
PF01602526 Adaptin_N: Adaptin N terminal region; InterPro: IP 97.79
KOG1020 1692 consensus Sister chromatid cohesion protein SCC2/N 97.69
KOG0212675 consensus Uncharacterized conserved protein [Funct 97.69
PLN03200 2102 cellulose synthase-interactive protein; Provisiona 97.69
KOG1242569 consensus Protein containing adaptin N-terminal re 97.66
KOG19431133 consensus Beta-tubulin folding cofactor D [Posttra 97.57
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 97.49
KOG14101082 consensus Nuclear transport receptor RanBP16 (impo 97.44
KOG1060 968 consensus Vesicle coat complex AP-3, beta subunit 97.38
PF1275597 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region 97.33
PF10508503 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; 97.3
KOG1059 877 consensus Vesicle coat complex AP-3, delta subunit 97.29
PTZ00429746 beta-adaptin; Provisional 97.26
KOG0166514 consensus Karyopherin (importin) alpha [Intracellu 97.24
KOG0212675 consensus Uncharacterized conserved protein [Funct 97.2
KOG22741005 consensus Predicted importin 9 [Intracellular traf 97.18
KOG09151702 consensus Uncharacterized conserved protein [Funct 97.08
KOG1248 1176 consensus Uncharacterized conserved protein [Funct 96.98
KOG1242569 consensus Protein containing adaptin N-terminal re 96.92
PF03378435 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: I 96.92
KOG02131172 consensus Splicing factor 3b, subunit 1 [RNA proce 96.83
PF1351355 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O 96.82
KOG0166514 consensus Karyopherin (importin) alpha [Intracellu 96.74
PF12719298 Cnd3: Nuclear condensing complex subunits, C-term 96.7
PF1275597 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region 96.68
KOG1993978 consensus Nuclear transport receptor KAP120 (impor 96.64
COG5096 757 Vesicle coat complex, various subunits [Intracellu 96.44
KOG1061734 consensus Vesicle coat complex AP-1/AP-2/AP-4, bet 96.39
PF12717178 Cnd1: non-SMC mitotic condensation complex subunit 96.3
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 96.29
COG5181975 HSH155 U2 snRNP spliceosome subunit [RNA processin 96.23
KOG1062 866 consensus Vesicle coat complex AP-1, gamma subunit 96.1
KOG0211759 consensus Protein phosphatase 2A regulatory subuni 96.09
PF08167165 RIX1: rRNA processing/ribosome biogenesis 96.08
PF05918556 API5: Apoptosis inhibitory protein 5 (API5); Inter 96.0
KOG1058 948 consensus Vesicle coat complex COPI, beta subunit 95.92
PF12348228 CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi 95.92
PF12348228 CLASP_N: CLASP N terminal; InterPro: IPR024395 Thi 95.88
KOG2022982 consensus Nuclear transport receptor LGL2 (importi 95.86
KOG1992960 consensus Nuclear export receptor CSE1/CAS (import 95.72
COG5181975 HSH155 U2 snRNP spliceosome subunit [RNA processin 95.67
PF14500262 MMS19_N: Dos2-interacting transcription regulator 95.65
KOG1240 1431 consensus Protein kinase containing WD40 repeats [ 95.57
KOG1240 1431 consensus Protein kinase containing WD40 repeats [ 95.41
PF1351355 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O 95.06
KOG1062 866 consensus Vesicle coat complex AP-1, gamma subunit 94.91
KOG1058 948 consensus Vesicle coat complex COPI, beta subunit 94.9
PF0298531 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT re 94.51
PF12460415 MMS19_C: RNAPII transcription regulator C-terminal 94.49
KOG10201692 consensus Sister chromatid cohesion protein SCC2/N 94.32
PRK09687280 putative lyase; Provisional 94.21
PRK09687280 putative lyase; Provisional 93.99
COG5096757 Vesicle coat complex, various subunits [Intracellu 93.77
PF12717178 Cnd1: non-SMC mitotic condensation complex subunit 93.5
cd00020120 ARM Armadillo/beta-catenin-like repeats. An approx 93.49
COG5064526 SRP1 Karyopherin (importin) alpha [Intracellular t 93.37
PF05004309 IFRD: Interferon-related developmental regulator ( 93.36
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 93.24
PF10521282 DUF2454: Protein of unknown function (DUF2454); In 93.17
KOG1060 968 consensus Vesicle coat complex AP-3, beta subunit 92.82
PF04826254 Arm_2: Armadillo-like; InterPro: IPR006911 This en 92.56
PF08167165 RIX1: rRNA processing/ribosome biogenesis 92.37
KOG1077938 consensus Vesicle coat complex AP-2, alpha subunit 92.24
PF1364688 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2I 92.2
PF04931784 DNA_pol_phi: DNA polymerase phi; InterPro: IPR0070 92.18
KOG12481176 consensus Uncharacterized conserved protein [Funct 92.17
KOG0414 1251 consensus Chromosome condensation complex Condensi 92.17
PF08767319 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 92.17
KOG0168 1051 consensus Putative ubiquitin fusion degradation pr 92.02
PF04931784 DNA_pol_phi: DNA polymerase phi; InterPro: IPR0070 91.68
KOG1059 877 consensus Vesicle coat complex AP-3, delta subunit 91.51
PF05804708 KAP: Kinesin-associated protein (KAP) 91.03
COG5240898 SEC21 Vesicle coat complex COPI, gamma subunit [In 90.87
PF12460415 MMS19_C: RNAPII transcription regulator C-terminal 90.14
KOG2956516 consensus CLIP-associating protein [General functi 89.84
PF10274183 ParcG: Parkin co-regulated protein; InterPro: IPR0 88.8
KOG1832 1516 consensus HIV-1 Vpr-binding protein [Cell cycle co 88.36
PF14500262 MMS19_N: Dos2-interacting transcription regulator 87.81
KOG0946 970 consensus ER-Golgi vesicle-tethering protein p115 87.6
PF1036392 DUF2435: Protein of unknown function (DUF2435) 87.46
KOG1943 1133 consensus Beta-tubulin folding cofactor D [Posttra 86.93
COG5064526 SRP1 Karyopherin (importin) alpha [Intracellular t 86.66
PRK13800897 putative oxidoreductase/HEAT repeat-containing pro 86.23
KOG20511128 consensus Nonsense-mediated mRNA decay 2 protein [ 85.82
PF01603409 B56: Protein phosphatase 2A regulatory B subunit ( 85.29
KOG4653982 consensus Uncharacterized conserved protein [Funct 85.11
KOG0943 3015 consensus Predicted ubiquitin-protein ligase/hyper 84.88
KOG1832 1516 consensus HIV-1 Vpr-binding protein [Cell cycle co 84.42
KOG1525 1266 consensus Sister chromatid cohesion complex Cohesi 83.65
PF08506370 Cse1: Cse1; InterPro: IPR013713 The exchange of ma 83.45
KOG4224550 consensus Armadillo repeat protein VAC8 required f 83.1
PF1036392 DUF2435: Protein of unknown function (DUF2435) 82.99
COG5656 970 SXM1 Importin, protein involved in nuclear import 82.85
KOG4653982 consensus Uncharacterized conserved protein [Funct 82.69
KOG0211759 consensus Protein phosphatase 2A regulatory subuni 80.72
PF05004309 IFRD: Interferon-related developmental regulator ( 80.25
>KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information 
Probab=100.00  E-value=7.3e-166  Score=1406.35  Aligned_cols=998  Identities=46%  Similarity=0.783  Sum_probs=915.8

Q ss_pred             CChHHHHHHHHHhcCCCHHHHHHHHHHHHHhccCCChHHHHHHHHHhcCcChhhHHHHHHHHHHhhhhcCCCCCC-CcCC
Q 001585            1 MDLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEP-NEQQ   79 (1049)
Q Consensus         1 Md~~~l~~~L~~tls~d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~~~~~~~iRq~Aai~lKn~i~~~W~~~~~-~~~~   79 (1049)
                      ||.+.+.++|.+|++||++.|+.||++|++++++|||..+|++|+.+.+.+.+|||+|||||||.|.++|+..+. ..+.
T Consensus         1 md~~~l~~~~~~T~d~d~~~R~~AE~~L~q~~K~pgFv~~lLqIi~~d~~~l~vrqaaaIYlKN~I~~~W~~~~~~g~~~   80 (1010)
T KOG1991|consen    1 MDLQSLLQIFRATIDSDAKERKAAEQQLNQLEKQPGFVSSLLQIIMDDGVPLPVRQAAAIYLKNKITKSWSSHEAPGRPF   80 (1010)
T ss_pred             CChHHHHHHHHHhcCCChHHHHHHHHHHHHhhcCCcHHHHHHHHHHccCCchhHHHHHHHHHHHHHHhcCCccCCCCCcC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999998642 2466


Q ss_pred             CCChHHHHHHHHHHHHHhhcCChHHHHHHHHHHHHHHHhhCCCCchhHHHHHHHHhhhh---hHHHHHHHHHHHHHhccc
Q 001585           80 KISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQ---QVYGALFVLRILSRKYEY  156 (1049)
Q Consensus        80 ~i~~~~k~~ir~~ll~~L~~~~~~ir~~l~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s~---~~~~~L~~L~~i~k~~~~  156 (1049)
                      .+++++|+.||++|+.++..+|..||.|++.|+..|...|||++||++++.+..+++++   .++|||.||++++|.|  
T Consensus        81 ~I~e~dk~~irenIl~~iv~~p~~iRvql~~~l~~Ii~~D~p~~Wp~l~d~i~~~Lqs~~~~~vy~aLl~l~qL~k~y--  158 (1010)
T KOG1991|consen   81 GIPEEDKAVIRENILETIVQVPELIRVQLTACLNTIIKADYPEQWPGLLDKIKNLLQSQDANHVYGALLCLYQLFKTY--  158 (1010)
T ss_pred             CCChHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHhcCCcccchhHHHHHHHHhcCcchhhHHHHHHHHHHHHHHH--
Confidence            79999999999999999999999999999999999999999999999999999999998   5899999999999999  


Q ss_pred             CCCCccccccccccccccccccchHHHHHHHHHHHHHHHHHHHhhccCCchhHHHHHHHHHHHHHHhhhccCCcccCChh
Q 001585          157 QPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVNPSLEVADLIKLICKIFWSSIYLEIPKQLLDPN  236 (1049)
Q Consensus       157 ~~t~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~Ll~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~~~~~lp~~~~~~~  236 (1049)
                                    +||+++.|.++..++..+||.+++++.+++..+  +.++.+++++|+|||++++++++|..+.+++
T Consensus       159 --------------e~k~~eeR~~l~~~v~~~fP~il~~~~~ll~~~--s~~s~el~klIlKifks~~~~~LP~~L~~~~  222 (1010)
T KOG1991|consen  159 --------------EWKKDEERQPLGEAVEELFPDILQIFNGLLSQE--SYQSVELQKLILKIFKSLIYYELPLELSAPE  222 (1010)
T ss_pred             --------------hhccccccccHHHHHHHHHHHHHHHHHhhcccc--chHHHHHHHHHHHHHHHHHHHhCCHHhhCch
Confidence                          899999999999999999999999999998865  4668999999999999999999999999999


Q ss_pred             hHHHHHHHHHHHhcCCCCCCCCCCChhhhhhcchHHHHHHHHHHHHHHHHHhCCCCCCChhhHHHHHHHHHhhHHHHHHH
Q 001585          237 VFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAGKILEC  316 (1049)
Q Consensus       237 ~l~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~k~kk~~~~~l~~l~~~~~~~~~~~~~~~~f~~~f~~~~~~~~~~~  316 (1049)
                      .|..||++|+.++++++|.++++.|+++|..|||||||||++++++|+|+|||+|+++.++|++|+.+|..++++.+++.
T Consensus       223 ~f~~W~~l~l~i~~rpvP~E~l~~d~e~R~~~~wwK~KKWa~~~L~Rlf~Ryg~~~~~~~~y~~Fa~~f~~n~~~~ile~  302 (1010)
T KOG1991|consen  223 TFTSWMELFLSILNRPVPVEVLSLDPEDRSSWPWWKCKKWALHILNRLFERYGSPSLVVPEYKEFAQMFLKNFAQGILEV  302 (1010)
T ss_pred             hHHHHHHHHHHHHcCCCChhcccCChhhcccccchhhHHHHHHHHHHHHHHhCCccccchhhHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999888999999999999999999999


Q ss_pred             HHHHHHHhhCCcccCHHHHHHHHHHHHhhcCCchhhhhchhhHHHHHHHHhhhccccChhhHhhhhcCHHHHHhHhcCcc
Q 001585          317 HLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLLQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDII  396 (1049)
Q Consensus       317 ~~~~l~~~~~~~~~~~~~~~~~l~fl~~~~~~~~~~~~~~~~l~~li~~~i~p~l~l~~~d~e~we~Dp~efi~~~~d~~  396 (1049)
                      +++++.+.+.+.|.+++++++++.|+..|++.+.+|++++||+..++..+|||.||++++|+|+|++||.||||+.+|.+
T Consensus       303 ~lk~l~~~~~~~yls~rvl~~~l~fl~~~Vs~~~twkll~PHl~~ii~~vIFPlmc~~d~deelwe~DP~EYiR~~~Di~  382 (1010)
T KOG1991|consen  303 FLKILEQWRQQLYLSDRVLYYLLNFLEQCVSHASTWKLLKPHLQVIIQDVIFPLMCFNDEDEELWEEDPYEYIRKKFDIF  382 (1010)
T ss_pred             HHHHHHHHHhcccCCHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHhhhhhcCCCcccHHHHhcCHHHHHHhcCchh
Confidence            99999997778899999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cccCCHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhcccCCCCcCCCCchhhhHHHHHHHHHHHhhhcCCCchhhHHHH
Q 001585          397 EDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLKQTEPYKSELERM  476 (1049)
Q Consensus       397 ~d~~s~R~aA~~ll~~L~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~w~~keaal~~lg~la~~l~~~~~~~~~~~~~  476 (1049)
                      +|.+||+.||..++.+++++||+++++.+++|+.++|++|..++....+.|+|||||+++|++++.+.++++|+.+++.|
T Consensus       383 ed~~sp~~Aa~~~l~~~~~KR~ke~l~k~l~F~~~Il~~~~~~~~~~~~~rqkdGAL~~vgsl~~~L~K~s~~~~~mE~f  462 (1010)
T KOG1991|consen  383 EDGYSPDTAALDFLTTLVSKRGKETLPKILSFIVDILTRYKEASPPNKNPRQKDGALRMVGSLASILLKKSPYKSQMEYF  462 (1010)
T ss_pred             cccCCCcHHHHHHHHHHHHhcchhhhhhHHHHHHHHHHhhcccCCCccChhhhhhHHHHHHHHHHHHccCCchHHHHHHH
Confidence            99999999999999999999999999999999999999998875555699999999999999999999999999999999


Q ss_pred             HHHhhccccCCCCcchhHHHHHHHHHhhccccCChhHHHHHHHHHHhcCC-CCCCchHHHHHHHHHHHHHhcc-cccccc
Q 001585          477 LVQHVFPEFSSPVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLR-DPELPVRVDSVFALRSFVEACR-DLNEIR  554 (1049)
Q Consensus       477 l~~~v~p~l~~~~~~lr~ra~~~l~~~~~~~f~~~~~~~~~~~~ll~~L~-d~~~~V~~~Aa~AL~~~~~~~~-~~~~l~  554 (1049)
                      +++||+|+|+++.++||+||||++|+|++..|+++..+.+++..+.+||. |+++|||+.||.||+.|+.+++ .++.++
T Consensus       463 lv~hVfP~f~s~~g~Lrarac~vl~~~~~~df~d~~~l~~ale~t~~~l~~d~~lPV~VeAalALq~fI~~~~~~~e~~~  542 (1010)
T KOG1991|consen  463 LVNHVFPEFQSPYGYLRARACWVLSQFSSIDFKDPNNLSEALELTHNCLLNDNELPVRVEAALALQSFISNQEQADEKVS  542 (1010)
T ss_pred             HHHHhhHhhcCchhHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHHhccCCcCchhhHHHHHHHHHHhcchhhhhhHh
Confidence            99999999999999999999999999999999999999999999999998 8999999999999999999986 557899


Q ss_pred             cchHHHHHHHHHHhhhhchhhHHHHHHHHHHHccCcccccHHHHHHHHHHHHHHHHhcccCCCCCCChhHHHHHHHHHHH
Q 001585          555 PILPQLLDEFFKLMNEVENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGALAAVGCLRAI  634 (1049)
Q Consensus       555 p~l~~il~~L~~ll~~~~~~~l~~~l~~iv~~~~~~i~p~~~~l~~~L~~~~~~~~~~~~~d~~~~~~~~~~~~~~le~i  634 (1049)
                      |+++++|+.|+++++++++|.+..+|+++|..|++++.|||.++|++|+.+|++++.+++++.+.++++.+.++|+|+||
T Consensus       543 ~hvp~~mq~lL~L~ne~End~Lt~vme~iV~~fseElsPfA~eL~q~La~~F~k~l~~~~~~~~~~ddk~iaA~GiL~Ti  622 (1010)
T KOG1991|consen  543 AHVPPIMQELLKLSNEVENDDLTNVMEKIVCKFSEELSPFAVELCQNLAETFLKVLQTSEDEDESDDDKAIAASGILRTI  622 (1010)
T ss_pred             hhhhHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHhccCCCCccchHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999875555556788999999999999


Q ss_pred             HHHHHhhcCChHHHHHHHhhHHHHHHHHcccchhhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhhhHhhhHhhh
Q 001585          635 STILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFSPTISLEMWSLWPLMMEALADWAIDFFPNI  714 (1049)
Q Consensus       635 ~~ll~~~~~~~~~~~~l~~~~~p~i~~~l~~~~~~~~~~~l~ll~~l~~~~~~isp~l~~l~~~l~~~~~~~~~~~l~~~  714 (1049)
                      ++++.+++++|+++.++++.++|++..+|+++..||+++++++...++...+.|||.||++||.+++++.+|+.+|++++
T Consensus       623 ~Til~s~e~~p~vl~~le~~~l~vi~~iL~~~i~dfyeE~~ei~~~~t~~~~~Isp~mW~ll~li~e~~~~~~~dyf~d~  702 (1010)
T KOG1991|consen  623 STILLSLENHPEVLKQLEPIVLPVIGFILKNDITDFYEELLEIVSSLTFLSKEISPIMWGLLELILEVFQDDGIDYFTDM  702 (1010)
T ss_pred             HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhhhhhcccCHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhhHhhcCcccccccCCcchHHHHHHHHHHHhcCCCCCCcccCchhhHHHHHHHhcccCchhchHHHHHHHHHHHHh
Q 001585          715 LVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQVDHWVEPYLRITVERLRR  794 (1049)
Q Consensus       715 ~~~L~~~i~~~~~~~l~~~~~~~~~~i~~i~~~~l~~~~~~~~~~~~a~~ll~~ii~~~~~~~~~~l~~il~~~l~~l~~  794 (1049)
                      ++.|+||+.+|...++  ++|.|++.++.||++++.++..+++|+..||+|++.++++|+|.+++++|.+++.++.|++.
T Consensus       703 ~~~l~N~vt~g~~~~~--s~~~y~~il~~i~~~~l~~e~~~D~d~~~a~kLle~iiL~~kg~~dq~iplf~~~a~~~l~~  780 (1010)
T KOG1991|consen  703 MPALHNYVTYGTPSLL--SNPDYLQILLEIIKKVLTSENGEDSDCESACKLLEVIILNCKGLLDQYIPLFLELALSRLTR  780 (1010)
T ss_pred             HHHHhhheeeCchhhh--ccchHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHHHHHhcCcHhhHhHHHHHHHHHHHhc
Confidence            9999999999999888  78999999999999999998888999999999999999999999999999999999999987


Q ss_pred             -hhhhHHHHHHHHHHHHHHhhCHHHHHHHHHhhCccHHHHHHHHHHHHHHHhhccccCcccchhhHHHHHHHHHHhcc-c
Q 001585          795 -AEKSYLKCLLVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLAL-T  872 (1049)
Q Consensus       795 -~~~~~~~~~~l~v~~~~~~~~p~~~l~~L~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~dkKl~~lal~~ll~~-~  872 (1049)
                       .+++.++..++.|++++++|||..++++|+..|++..||..|+....         .+.+.||||+|++||++|++. +
T Consensus       781 ~~e~s~~~~~~leVvinalyynP~ltL~iLe~~~~~~~ff~~wf~~~~---------~~~~~HDkKlcvL~l~tli~l~~  851 (1010)
T KOG1991|consen  781 EVETSELRVMLLEVVINALYYNPKLTLGILENQGFLNNFFTLWFQFIN---------QFKKVHDKKLCVLGLLTLISLGQ  851 (1010)
T ss_pred             cccchHHHHHHHHHHHHHHHcCcHHHHHHHHHcCCcccHHHHHHHHHH---------HHHhhhhHHHHHHHHHHHHhccc
Confidence             77999999999999999999999999999999999999999999999         888899999999999999999 5


Q ss_pred             cCCCChhhHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCCCcCCCCCCCCCCCCCCCCCCCCCCCCCCchhhHHHHHHHH
Q 001585          873 ADQLPGEALGRVFRATLDLLVAYKEQVAEAAKDEEAEDDDDMDGFQTDDEDDDGDGSDKEMGVDAEDGDEADSIRLQKLA  952 (1049)
Q Consensus       873 ~~~l~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~l~  952 (1049)
                      .+++|....++++..++.++.+||+++++|++.+++.++++   ++   ++++|+|+-.+   |++|+++++++|.+.+.
T Consensus       852 ~~~~~~e~l~~l~~~lv~L~~~Lp~ala~ra~~~ee~~~e~---~~---~~~~~~e~~~~---d~dD~d~~d~d~~~~~~  922 (1010)
T KOG1991|consen  852 DPQLPSEVLGQLGPALVELLLSLPEALAERAQVEEEDSEEG---EE---EDDDEEEDFID---DEDDIDEDDQDYLDEYG  922 (1010)
T ss_pred             cCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc---cC---CCCcchhhccC---ccccccccchhHHHhhc
Confidence            56676667789999999999999999999977654321111   11   11111111111   11111122223455444


Q ss_pred             HHHhhcCC-CCCCCCCCCC--CCCCCCCCCCCCCCCchHHHHHHHHHHHHhhChHHHHHHhcCCCHHHHHHHHHHHHHHH
Q 001585          953 AQARAFRP-HDEDDDDSDD--DFSDDEELQSPIDEVDPFVFFVDTIKVMQASDPLRFQNLTQTLEFQYQALANGVAQHAD 1029 (1049)
Q Consensus       953 ~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~pl~~vd~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~l~~~~~~~~ 1029 (1049)
                      .-+....+ .++|||.++|  +++||+.|+||||+||+|.+|+++++.++++++++|+.|+++|++++|+.||.++++++
T Consensus       923 ~~~~~~~~~~~~ddd~d~~~~~~~ed~~f~t~LD~VD~f~~f~~~i~~lq~~d~~~yq~l~~~L~~~q~~~lq~I~~~~~ 1002 (1010)
T KOG1991|consen  923 ELALEKEDSLDDDDDFDEDELDLEEDELFETPLDQVDPFQLFKEAITNLQSSDAVRYQKLISTLTPEQQDSLQTILTHAE 1002 (1010)
T ss_pred             cccccccccccccccccchhccccccccccCcccccchHHHHHHHHHhhhccChHHHHHHHhcCCHHHHHHHHHHHHhHH
Confidence            32211111 1222222222  45678999999999999999999999999999999999999999999999999999999


Q ss_pred             HhHHHHH
Q 001585         1030 QRRVEIE 1036 (1049)
Q Consensus      1030 ~~~~~~~ 1036 (1049)
                      +||.+++
T Consensus      1003 ~r~a~~~ 1009 (1010)
T KOG1991|consen 1003 QRRAVAE 1009 (1010)
T ss_pred             HHHHHhc
Confidence            9998764

>COG5656 SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1992 consensus Nuclear export receptor CSE1/CAS (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1993 consensus Nuclear transport receptor KAP120 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure] Back     alignment and domain information
>COG5657 CSE1 CAS/CSE protein involved in chromosome segregation [Cell division and chromosome partitioning] Back     alignment and domain information
>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF08506 Cse1: Cse1; InterPro: IPR013713 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane Back     alignment and domain information
>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous [] Back     alignment and domain information
>KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG2022 consensus Nuclear transport receptor LGL2 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5101 CRM1 Importin beta-related nuclear transport receptor [Nuclear structure / Intracellular trafficking and secretion] Back     alignment and domain information
>KOG2171 consensus Karyopherin (importin) beta 3 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2021 consensus Nuclear mRNA export factor receptor LOS1/Exportin-t (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport; Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG2081 consensus Nuclear transport regulator [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1991 consensus Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG2023 consensus Nuclear transport receptor Karyopherin-beta2/Transportin (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1241 consensus Karyopherin (importin) beta 1 [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF03810 IBN_N: Importin-beta N-terminal domain; InterPro: IPR001494 Karyopherins are a group of proteins involved in transporting molecules through the pores of the nuclear envelope Back     alignment and domain information
>KOG2020 consensus Nuclear transport receptor CRM1/MSN5 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5215 KAP95 Karyopherin (importin) beta [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] Back     alignment and domain information
>KOG1824 consensus TATA-binding protein-interacting protein [General function prediction only] Back     alignment and domain information
>PF08389 Xpo1: Exportin 1-like protein; InterPro: IPR013598 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>KOG0915 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>PF01602 Adaptin_N: Adaptin N terminal region; InterPro: IPR002553 Proteins synthesized on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment Back     alignment and domain information
>KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>KOG0212 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>PLN03200 cellulose synthase-interactive protein; Provisional Back     alignment and domain information
>KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>KOG1410 consensus Nuclear transport receptor RanBP16 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region Back     alignment and domain information
>PF10508 Proteasom_PSMB: Proteasome non-ATPase 26S subunit; InterPro: IPR019538 The 26S proteasome is an enzymatic complex that degrades ubiquitinated proteins in eukaryotic cells Back     alignment and domain information
>KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PTZ00429 beta-adaptin; Provisional Back     alignment and domain information
>KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0212 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG2274 consensus Predicted importin 9 [Intracellular trafficking, secretion, and vesicular transport; Nuclear structure] Back     alignment and domain information
>KOG0915 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1248 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG1242 consensus Protein containing adaptin N-terminal region [Translation, ribosomal structure and biogenesis] Back     alignment and domain information
>PF03378 CAS_CSE1: CAS/CSE protein, C-terminus; InterPro: IPR005043 Mammalian cellular apoptosis susceptibility (CAS) proteins and the yeast chromosome-segregation protein, CSE1 are homologous [] Back     alignment and domain information
>KOG0213 consensus Splicing factor 3b, subunit 1 [RNA processing and modification] Back     alignment and domain information
>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B Back     alignment and domain information
>KOG0166 consensus Karyopherin (importin) alpha [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF12719 Cnd3: Nuclear condensing complex subunits, C-term domain Back     alignment and domain information
>PF12755 Vac14_Fab1_bd: Vacuolar 14 Fab1-binding region Back     alignment and domain information
>KOG1993 consensus Nuclear transport receptor KAP120 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] Back     alignment and domain information
>KOG1061 consensus Vesicle coat complex AP-1/AP-2/AP-4, beta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] Back     alignment and domain information
>KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF08167 RIX1: rRNA processing/ribosome biogenesis Back     alignment and domain information
>PF05918 API5: Apoptosis inhibitory protein 5 (API5); InterPro: IPR008383 This family consists of apoptosis inhibitory protein 5 (API5) sequences from several organisms Back     alignment and domain information
>KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] Back     alignment and domain information
>PF12348 CLASP_N: CLASP N terminal; InterPro: IPR024395 This domain is found in the N-terminal region of CLIP-associated proteins (CLASPs), which are widely conserved microtubule plus-end-tracking proteins that regulate the stability of dynamic microtubules [, ] Back     alignment and domain information
>KOG2022 consensus Nuclear transport receptor LGL2 (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1992 consensus Nuclear export receptor CSE1/CAS (importin beta superfamily) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>COG5181 HSH155 U2 snRNP spliceosome subunit [RNA processing and modification] Back     alignment and domain information
>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II Back     alignment and domain information
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] Back     alignment and domain information
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms] Back     alignment and domain information
>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B Back     alignment and domain information
>KOG1062 consensus Vesicle coat complex AP-1, gamma subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>KOG1058 consensus Vesicle coat complex COPI, beta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 [] Back     alignment and domain information
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins Back     alignment and domain information
>KOG1020 consensus Sister chromatid cohesion protein SCC2/Nipped-B [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning; Replication, recombination and repair] Back     alignment and domain information
>PRK09687 putative lyase; Provisional Back     alignment and domain information
>PRK09687 putative lyase; Provisional Back     alignment and domain information
>COG5096 Vesicle coat complex, various subunits [Intracellular trafficking and secretion] Back     alignment and domain information
>PF12717 Cnd1: non-SMC mitotic condensation complex subunit 1 Back     alignment and domain information
>cd00020 ARM Armadillo/beta-catenin-like repeats Back     alignment and domain information
>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] Back     alignment and domain information
>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information
>PF10521 DUF2454: Protein of unknown function (DUF2454); InterPro: IPR018870 Putative protein of unknown function; subunit of the ASTRA complex which is part of the chromatin remodeling machinery; similar to Schizosaccharomyces pombe (Fission yeast) Tti2p; may interact with Rsm23p [] Back     alignment and domain information
>KOG1060 consensus Vesicle coat complex AP-3, beta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF04826 Arm_2: Armadillo-like; InterPro: IPR006911 This entry consists of mammalian proteins of unknown function Back     alignment and domain information
>PF08167 RIX1: rRNA processing/ribosome biogenesis Back     alignment and domain information
>KOG1077 consensus Vesicle coat complex AP-2, alpha subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A Back     alignment and domain information
>PF04931 DNA_pol_phi: DNA polymerase phi; InterPro: IPR007015 Proteins of this family are predominantly nucleolar Back     alignment and domain information
>KOG1248 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0414 consensus Chromosome condensation complex Condensin, subunit D2 [Chromatin structure and dynamics; Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF08767 CRM1_C: CRM1 C terminal; InterPro: IPR014877 CRM1 (also known as Exportin1) mediates the nuclear export of proteins bearing a leucine-rich nuclear export signal (NES) Back     alignment and domain information
>KOG0168 consensus Putative ubiquitin fusion degradation protein [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>PF04931 DNA_pol_phi: DNA polymerase phi; InterPro: IPR007015 Proteins of this family are predominantly nucleolar Back     alignment and domain information
>KOG1059 consensus Vesicle coat complex AP-3, delta subunit [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF05804 KAP: Kinesin-associated protein (KAP) Back     alignment and domain information
>COG5240 SEC21 Vesicle coat complex COPI, gamma subunit [Intracellular trafficking and secretion] Back     alignment and domain information
>PF12460 MMS19_C: RNAPII transcription regulator C-terminal; InterPro: IPR024687 This domain, approximately 60 amino acids in length, is found in the N-terminal region of MMS19 proteins Back     alignment and domain information
>KOG2956 consensus CLIP-associating protein [General function prediction only] Back     alignment and domain information
>PF10274 ParcG: Parkin co-regulated protein; InterPro: IPR019399 This family of proteins is transcribed anti-sense along the DNA to the Parkin gene product and the two appear to be transcribed under the same promoter Back     alignment and domain information
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF14500 MMS19_N: Dos2-interacting transcription regulator of RNA-Pol-II Back     alignment and domain information
>KOG0946 consensus ER-Golgi vesicle-tethering protein p115 [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10363 DUF2435: Protein of unknown function (DUF2435) Back     alignment and domain information
>KOG1943 consensus Beta-tubulin folding cofactor D [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>COG5064 SRP1 Karyopherin (importin) alpha [Intracellular trafficking and secretion] Back     alignment and domain information
>PRK13800 putative oxidoreductase/HEAT repeat-containing protein; Provisional Back     alignment and domain information
>KOG2051 consensus Nonsense-mediated mRNA decay 2 protein [RNA processing and modification] Back     alignment and domain information
>PF01603 B56: Protein phosphatase 2A regulatory B subunit (B56 family); InterPro: IPR002554 Protein phosphatase 2A (PP2A) is a major intracellular protein phosphatase that regulates multiple aspects of cell growth and metabolism Back     alignment and domain information
>KOG4653 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0943 consensus Predicted ubiquitin-protein ligase/hyperplastic discs protein, HECT superfamily [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>KOG1525 consensus Sister chromatid cohesion complex Cohesin, subunit PDS5 [Cell cycle control, cell division, chromosome partitioning] Back     alignment and domain information
>PF08506 Cse1: Cse1; InterPro: IPR013713 The exchange of macromolecules between the nucleus and cytoplasm takes place through nuclear pore complexes within the nuclear membrane Back     alignment and domain information
>KOG4224 consensus Armadillo repeat protein VAC8 required for vacuole fusion, inheritance and cytosol-to-vacuole protein targeting [Intracellular trafficking, secretion, and vesicular transport] Back     alignment and domain information
>PF10363 DUF2435: Protein of unknown function (DUF2435) Back     alignment and domain information
>COG5656 SXM1 Importin, protein involved in nuclear import [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>KOG4653 consensus Uncharacterized conserved protein [Function unknown] Back     alignment and domain information
>KOG0211 consensus Protein phosphatase 2A regulatory subunit A and related proteins [Signal transduction mechanisms] Back     alignment and domain information
>PF05004 IFRD: Interferon-related developmental regulator (IFRD); InterPro: IPR007701 Interferon-related developmental regulator (IFRD1) is the human homologue of the Rattus norvegicus early response protein PC4 and its murine homologue TIS7 [] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1049
1z3h_A968 The Exportin Cse1 In Its Cargo-free, Cytoplasmic St 1e-13
1wa5_C960 Crystal Structure Of The Exportin Cse1p Complexed W 1e-13
>pdb|1Z3H|A Chain A, The Exportin Cse1 In Its Cargo-free, Cytoplasmic State Length = 968 Back     alignment and structure 
Iteration: 1

 Score = 75.9 bits (185), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 102/451 (22%), Positives = 189/451 (41%), Gaps = 50/451 (11%)
Query: 22  KAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQKI 81
           K +E +L Q +      + LL +I   N  LS R   ++ FKNFI + W     N     
Sbjct: 21  KTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDENGNHLLPA 80
Query: 82  SQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQQVY 141
           + V+  +++  I+  +  +P  L+VQ+GE + +I  +D+P++WP LL  +   L +  + 
Sbjct: 81  NNVE--LIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMV 138
Query: 142 GALFVLRILSRKYE-YQPTDSTSMKGYRIYEFKSDE---ERTPVYRIVEETFHHLLNIFN 197
               VL +    ++ ++P             F+SDE   E   V  +    F +LL   +
Sbjct: 139 TNKGVLTVAHSIFKRWRPL------------FRSDELFLEIKLVLDVFTAPFLNLLKTVD 186
Query: 198 RLVQIV-----NPSLEVA-DLIKLICKIFWSSIYLEIPKQLLDPNVFNAWMILFLNVLER 251
              QI        SL +  D++ ++ K+++     +IP +  + N+    M +F   L  
Sbjct: 187 E--QITANENNKASLNILFDVLLVLIKLYYDFNCQDIP-EFFEDNI-QVGMGIFHKYLSY 242
Query: 252 PVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNYAG 311
             P   +P + E        KVK     ++    TR+ D+         F  M       
Sbjct: 243 SNPLLEDPDETEHASV--LIKVKSSIQELVQLYTTRYEDV---------FGPMI-----N 286
Query: 312 KILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLL--QPRLDVLLFEIVFP 369
           + ++   NLL  I       D + +  L +L+        + +   +  ++ +  +I+ P
Sbjct: 287 EFIQITWNLLTSISNQPKY-DILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILP 345
Query: 370 LMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFI 429
            +   + D +L+++DP EY+R+  +   D  + R A  DF+ EL  K        F+  +
Sbjct: 346 NVTLREEDVELFEDDPIEYIRRDLE-GSDTDTRRRACTDFLKELKEKNEVLVTNIFLAHM 404
Query: 430 VGIFKRYDETPVEYKPYRQKDGALLAIGALC 460
            G   +Y   P   K ++ KD  +    AL 
Sbjct: 405 KGFVDQYMSDP--SKNWKFKDLYIYLFTALA 433
>pdb|1WA5|C Chain C, Crystal Structure Of The Exportin Cse1p Complexed With Its Cargo (Kap60p) And Rangtp Length = 960 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1049
1wa5_C960 Importin alpha RE-exporter; nuclear transport/comp 1e-138
4fdd_A852 Transportin-1; heat repeats, karyopherin, nuclear 6e-44
2bpt_A861 Importin beta-1 subunit; nuclear transport, nucleo 2e-39
3m1i_C1049 Exportin-1; heat repeat, GTP-binding, nucleotide-b 2e-29
2x19_B963 Importin-13; nuclear transport, protein transport; 3e-28
1qgr_A876 Protein (importin beta subunit); transport recepto 5e-28
1ibr_B462 P95, importin beta-1 subunit, nuclear factor; smal 1e-23
2x1g_F971 Cadmus; transport protein, developmental protein, 3e-19
3gjx_A1073 Exportin-1; transport, cytoplasm, nucleus, RNA-bin 2e-18
3ibv_A980 Exportin-T; karyopherin, heat repeat, cytoplasm, n 4e-18
3a6p_A 1204 Exportin-5; exportin-5, RANGTP, nuclearexport, imp 4e-14
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 6e-13
1vt4_I1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-09
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 2e-06
1b3u_A588 Protein (protein phosphatase PP2A); scaffold prote 4e-04
>1wa5_C Importin alpha RE-exporter; nuclear transport/complex, nuclear transport, exportin, RAN GTPase, protein transport; HET: GTP; 2.0A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 1z3h_A Length = 960 Back     alignment and structure
 Score =  439 bits (1129), Expect = e-138
 Identities = 156/964 (16%), Positives = 346/964 (35%), Gaps = 119/964 (12%)

Query: 2   DLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIH 61
           DL ++A  L    S      K +E +L Q +      + LL +I   N  LS R   ++ 
Sbjct: 3   DLETVAKFLAE--SVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALF 60

Query: 62  FKNFIAKNWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYP 121
           FKNFI + W     N    +   + ++++  I+  +  +P  L+VQ+GE + +I  +D+P
Sbjct: 61  FKNFIKRKWVDENGN--HLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFP 118

Query: 122 EQWPHLLDWVKHNLQDQ---QVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEER 178
           ++WP LL  +   L +       G L V   + +++                 F+SDE  
Sbjct: 119 DRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWR--------------PLFRSDELF 164

Query: 179 TPVYRIVEETFHHLLNIFNRLVQIVNPS-------LEVADLIKLICKIFWSSIYLEIPKQ 231
             +  +++      LN+   + + +  +         + D++ ++ K+++     +IP+ 
Sbjct: 165 LEIKLVLDVFTAPFLNLLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEF 224

Query: 232 LLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDL 291
             D       M +F   L    P   +P + E   +    KVK     ++    TR+ D 
Sbjct: 225 FED--NIQVGMGIFHKYLSYSNPLLEDPDETE--HASVLIKVKSSIQELVQLYTTRYED- 279

Query: 292 KLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSM 351
                               + ++   NLL  I       D + +  L +L+        
Sbjct: 280 -------------VFGPMINEFIQITWNLLTSIS-NQPKYDILVSKSLSFLTAVTRIPKY 325

Query: 352 YNL--LQPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDF 409
           + +   +  ++ +  +I+ P +   + D +L+++DP EY+R+  +   D  + R A  DF
Sbjct: 326 FEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRRDLE-GSDTDTRRRACTDF 384

Query: 410 VSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALC------DKL 463
           + EL  K        F+  + G   +Y   P +   ++ KD  +    AL       +  
Sbjct: 385 LKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSK--NWKFKDLYIYLFTALAINGNITNAG 442

Query: 464 KQTEPYKSELERMLVQHVFPEFSS---PVGHLRAKAAWVAGQYAHINFSDQNNFRKALHS 520
             +      +     + + P+ +S   P   LR  A      +   N   +    + +  
Sbjct: 443 VSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFR--NQLTKAQLIELMPI 500

Query: 521 VVSGLRDPELPVRVDSVFALRSFVE---------ACRDLNEIRPILPQLLDEFFKLMNEV 571
           + + L+  E  V   +   +   +                +I      LL     L+ + 
Sbjct: 501 LATFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKH 560

Query: 572 --------ENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPG 623
                   ENE L+ ++  ++    + + P    L                  ++  +P 
Sbjct: 561 GSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVT------IMAKNPSNP- 613

Query: 624 ALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTF 683
                    +I  IL            +  +++P    + + D QE    V +I++++  
Sbjct: 614 -RFTHYTFESIGAILNYTQ--RQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVE 670

Query: 684 FSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWS 743
            S TI   +  L   ++           P +   L ++I   ++ F           +  
Sbjct: 671 QSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIF------PDLVPVLG 724

Query: 744 MVSSIMADKNLEDGDIEPAPKLIEVVFQNCKGQ-VDHWVEPYLRITVERLRRAEK-SYLK 801
           +   ++A K  E         L+E +        +  +++    + ++RL+ ++   Y+K
Sbjct: 725 IFQRLIASKAYEVH----GFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVK 780

Query: 802 CLLVQVIADALYYNSSLTLSILHKL--GVATEVF-NLWFQMLQQVKKNGLRVNFKREHDK 858
            L V     +    S   +  + ++  G+  +++ N     L                D+
Sbjct: 781 KLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFIITTLP---------TIGNLLDR 831

Query: 859 KVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVAEAAKDEE---AEDDDDMD 915
           K+  +G+ ++  +   Q        +  +T++ ++      + A    +    ++ +++ 
Sbjct: 832 KIALIGVLNM--VINGQFFQSKYPTLISSTMNSIIETASSQSIANLKNDYVDLDNLEEIS 889

Query: 916 GFQT 919
            F +
Sbjct: 890 TFGS 893
>4fdd_A Transportin-1; heat repeats, karyopherin, nuclear import, protein transport importin, transportin, transport protein; 2.30A {Homo sapiens} PDB: 2ot8_A 2h4m_A 2z5k_A 2z5j_A 2qmr_A 2z5m_A 2z5n_A 2z5o_A 1qbk_B* Length = 852 Back     alignment and structure
>2bpt_A Importin beta-1 subunit; nuclear transport, nucleocytoplasmic transport, nuclear trafficking, importin- beta, complex; 1.99A {Saccharomyces cerevisiae} SCOP: a.118.1.1 PDB: 2bku_B 3ea5_B* 3nd2_A Length = 861 Back     alignment and structure
>3m1i_C Exportin-1; heat repeat, GTP-binding, nucleotide-binding, NUCL protein transport, transport, cytoplasm, GTPase activation; HET: GTP; 2.00A {Saccharomyces cerevisiae} PDB: 2l1l_B Length = 1049 Back     alignment and structure
>2x19_B Importin-13; nuclear transport, protein transport; HET: GTP; 2.80A {Homo sapiens} PDB: 2xwu_B Length = 963 Back     alignment and structure
>1qgr_A Protein (importin beta subunit); transport receptor, nuclear import, heat motif, NLS-binding; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1qgk_A 2p8q_A 2q5d_A 3lww_A 1ukl_A 2qna_A Length = 876 Back     alignment and structure
>1ibr_B P95, importin beta-1 subunit, nuclear factor; small GTPase, nuclear transport receptor, cell cycle, translation; HET: GNP; 2.30A {Homo sapiens} SCOP: a.118.1.1 PDB: 1m5n_S 1gcj_A 1f59_A 1o6o_A 1o6p_A Length = 462 Back     alignment and structure
>2x1g_F Cadmus; transport protein, developmental protein, mRNA processing, nuclear transport, mRNA splicing, mRNA transport; 3.35A {Drosophila melanogaster} Length = 971 Back     alignment and structure
>3gjx_A Exportin-1; transport, cytoplasm, nucleus, RNA-binding, acetylation, GTP-binding, HOST-virus interaction, nucleotide-binding, phosphoprotein; HET: GTP; 2.50A {Mus musculus} PDB: 3nby_A* 3nbz_A* 3nc0_A* 3nc1_A* 3gb8_A Length = 1073 Back     alignment and structure
>3ibv_A Exportin-T; karyopherin, heat repeat, cytoplasm, nucleus, RNA- binding, transport, tRNA processing, tRNA-binding, RNA binding protein; 3.10A {Schizosaccharomyces pombe} PDB: 3icq_T* Length = 980 Back     alignment and structure
>3a6p_A Exportin-5; exportin-5, RANGTP, nuclearexport, importin-BE family, nucleus, phosphoprotein, protein transport; HET: GTP; 2.92A {Homo sapiens} Length = 1204 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1b3u_A Protein (protein phosphatase PP2A); scaffold protein, phosphorylation, heat repeat; 2.30A {Homo sapiens} SCOP: a.118.1.2 PDB: 2ie4_A* 2ie3_A* 2npp_A* 3k7v_A* 3k7w_A* 3fga_A* 2pf4_A 2iae_A 2nym_A* 2nyl_A* 3dw8_A* 2pkg_A 3c5w_A Length = 588 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1049
d1wa5c_959 a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Sacc 1e-132
d1qbkb_888 a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapi 2e-36
d1qgra_876 a.118.1.1 (A:) Importin beta {Human (Homo sapiens) 3e-35
d2bpta1861 a.118.1.1 (A:1-861) Importin beta {Baker's yeast ( 4e-34
d1ibrb_458 a.118.1.1 (B:) Importin beta {Human (Homo sapiens) 3e-31
d1u6gc_ 1207 a.118.1.2 (C:) Cullin-associated NEDD8-dissociated 3e-04
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 959 Back     information, alignment and structure

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Exportin Cse1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  423 bits (1087), Expect = e-132
 Identities = 155/1051 (14%), Positives = 348/1051 (33%), Gaps = 147/1051 (13%)

Query: 2    DLPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIH 61
            DL ++A  L    S      K +E +L Q +      + LL +I   N  LS R   ++ 
Sbjct: 3    DLETVAKFLAE--SVIASTAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALF 60

Query: 62   FKNFIAKNWAPHEPNEQQKISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYP 121
            FKNFI + W     N    +   + ++++  I+  +  +P  L+VQ+GE + +I  +D+P
Sbjct: 61   FKNFIKRKWVDENGN--HLLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFP 118

Query: 122  EQWPHLLDWVKHNLQDQ---QVYGALFVLRILSRKYEYQPTDSTSMKGYRIYEFKSDEER 178
            ++WP LL  +   L +       G L V   + +++                 F+SDE  
Sbjct: 119  DRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWR--------------PLFRSDELF 164

Query: 179  TPVYRIVEETFHHLLNIFNRLVQIVNPSL-------EVADLIKLICKIFWSSIYLEIPKQ 231
              +  +++      LN+   + + +  +         + D++ ++ K+++     +IP+ 
Sbjct: 165  LEIKLVLDVFTAPFLNLLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIPEF 224

Query: 232  LLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDL 291
              D       M +F   L    P   +P + E   +    KVK     ++    TR+ D 
Sbjct: 225  FED--NIQVGMGIFHKYLSYSNPLLEDPDETEH--ASVLIKVKSSIQELVQLYTTRYED- 279

Query: 292  KLQNPENRAFAQMFQKNYAGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSM 351
                                + ++   NLL  I       D + +  L +L+        
Sbjct: 280  -------------VFGPMINEFIQITWNLLTSIS-NQPKYDILVSKSLSFLTAVTRIPKY 325

Query: 352  YNLLQ--PRLDVLLFEIVFPLMCFNDNDQKLWDEDPHEYVRKGYDIIEDLYSPRTASMDF 409
            + +      ++ +  +I+ P +   + D +L+++DP EY+R+      D  + R A  DF
Sbjct: 326  FEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIEYIRR-DLEGSDTDTRRRACTDF 384

Query: 410  VSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYR----QKDGALLAIGALCDKLKQ 465
            + EL  K        F+  + G   +Y   P +   ++        AL   G + +    
Sbjct: 385  LKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSKNWKFKDLYIYLFTALAINGNITNAGVS 444

Query: 466  TEPYKSELERMLVQHVFPEFSS---PVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVV 522
            +      +     + + P+ +S   P   LR  A      + +          + +  + 
Sbjct: 445  STNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQLTKA--QLIELMPILA 502

Query: 523  SGLRDPELPVRVDSVFALRSFVEACRD---------LNEIRPILPQLLDEFFKLMNEV-- 571
            + L+  E  V   +   +   +                +I      LL     L+ +   
Sbjct: 503  TFLQTDEYVVYTYAAITIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKHGS 562

Query: 572  ------ENEDLVFTLETIVDKFGEEMAPYALGLCQNLAAAFWRCMNTAEADEDADDPGAL 625
                  ENE L+ ++  ++    + + P    L                  ++  +P   
Sbjct: 563  SPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQFIEIVT------IMAKNPSNP--R 614

Query: 626  AAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYMTFFS 685
                   +I  IL            +  +++P    + + D QE    V +I++++   S
Sbjct: 615  FTHYTFESIGAILNYTQ--RQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFVVEQS 672

Query: 686  PTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMV 745
             TI   +  L   ++           P +   L ++I   ++ F           +  + 
Sbjct: 673  ATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPD------LVPVLGIF 726

Query: 746  SSIMADKNLEDGDIEPAPKLIEVVFQNCKGQV-DHWVEPYLRITVERLRRAEK-SYLKCL 803
              ++A K  E         L+E +           +++    + ++RL+ ++   Y+K L
Sbjct: 727  QRLIASKAYEVH----GFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVKKL 782

Query: 804  LVQVIADALYYNSSLTLSILHKLGVATEVFNLWFQMLQQVKKNGLRVNFKREHDKKVCCL 863
             V     +    S   +  + ++        L+ Q+        L        D+K+  +
Sbjct: 783  TVFFGLISNKLGSDFLIHFIDEV-----QDGLFQQIWGNFIITTLP-TIGNLLDRKIALI 836

Query: 864  GLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVAEAAKDEEAEDDDDMDGFQTDDED 923
            G+ +++              +  +T++ +                     ++   +    
Sbjct: 837  GVLNMVINGQFFQS--KYPTLISSTMNSI---------------------IETASSQSIA 873

Query: 924  DDGDGSDKEMGVDAEDGDEADSIRLQKLAAQARAFRPHDEDDDDSDDDFSDDEELQSPID 983
            +  +       ++      +   +L  ++                       + L     
Sbjct: 874  NLKNDYVDLDNLEEISTFGSHFSKLVSISE-------------------KPFDPLPEIDV 914

Query: 984  EVDPFVFFVDTIKVMQASDPLR-FQNLTQTL 1013
                 ++  + +    A         +   L
Sbjct: 915  NNGVRLYVAEALNKYNAISGNTFLNTILPQL 945
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Length = 888 Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 876 Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 861 Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Length = 458 Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Length = 1207 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1049
d1wa5c_959 Exportin Cse1p {Baker's yeast (Saccharomyces cerev 100.0
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 100.0
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 100.0
d1qgra_876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 100.0
d1u6gc_ 1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 99.91
d2bpta1861 Importin beta {Baker's yeast (Saccharomyces cerevi 99.9
d1qbkb_888 Karyopherin beta2 {Human (Homo sapiens) [TaxId: 96 99.88
d1qgra_876 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 99.86
d1u6gc_ 1207 Cullin-associated NEDD8-dissociated protein 1 (Tip 99.84
d1b3ua_588 Constant regulatory domain of protein phosphatase 99.76
d1b3ua_588 Constant regulatory domain of protein phosphatase 99.72
d1ibrb_458 Importin beta {Human (Homo sapiens) [TaxId: 9606]} 99.56
d1wa5c_959 Exportin Cse1p {Baker's yeast (Saccharomyces cerev 99.34
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 99.1
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 98.69
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 98.61
d1wa5b_503 Karyopherin alpha {Baker's yeast (Saccharomyces ce 98.43
d2vglb_579 Adaptin beta subunit N-terminal fragment {Human (H 98.41
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 98.26
d1q1sc_434 Importin alpha {Mouse (Mus musculus) [TaxId: 10090 98.2
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 97.26
d1xqra1264 Hsp70-binding protein 1 (HspBP1) {Human (Homo sapi 96.92
d2vgla_584 Adaptin alpha C subunit N-terminal fragment {Mouse 96.79
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 95.32
d1te4a_111 MTH187 {Archaeon Methanobacterium thermoautotrophi 95.16
d1xm9a1457 Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} 94.88
d1jdha_529 beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} 94.68
d1te4a_111 MTH187 {Archaeon Methanobacterium thermoautotrophi 94.4
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: ARM repeat
family: Armadillo repeat
domain: Exportin Cse1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=0  Score=750.61  Aligned_cols=913  Identities=17%  Similarity=0.250  Sum_probs=720.6

Q ss_pred             CC-HHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             99-58999999971499988899999999971069871999999997148683467999999977563037888888689
Q 001585            1 MD-LPSLALILQGALSPNPEERKAAEHSLNQFQYTPQHLVRLLQIIVDNNCDLSVRQVASIHFKNFIAKNWAPHEPNEQQ   79 (1049)
Q Consensus         1 md-~~~l~~~L~~tls~d~~~r~~AE~~L~~~~~~p~f~~~Ll~i~~~~~~~~~iR~~Aai~lKn~I~~~W~~~~~~~~~   79 (1049)
                      |+ +++|.++|+++++|+  +||+||++|++++++|||..+|++|+.+.+.+.++|++|+|+|||.|+++|+...  .++
T Consensus         1 ~~d~~~l~~ll~~s~~~~--~~k~Ae~~L~~~~~~p~f~~~L~~i~~~~~~~~~iR~~A~i~lKn~i~~~W~~~~--~~~   76 (959)
T d1wa5c_           1 MSDLETVAKFLAESVIAS--TAKTSERNLRQLETQDGFGLTLLHVIASTNLPLSTRLAGALFFKNFIKRKWVDEN--GNH   76 (959)
T ss_dssp             CCHHHHHHHHHHHTTSGG--GHHHHHHHHHHHHTSTTHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHSBCSS--SCB
T ss_pred             CCCHHHHHHHHHHCCCHH--HHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCC--CCC
T ss_conf             971999999998789968--9999999999977099899999999835899999999999999999998556434--457


Q ss_pred             CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCC
Q ss_conf             99967899999999989611995889999999999997308998245799999971033---398899999999995016
Q 001585           80 KISQVDKDMVRDHILVFVAQVPPLLRVQLGECLKTIIHADYPEQWPHLLDWVKHNLQDQ---QVYGALFVLRILSRKYEY  156 (1049)
Q Consensus        80 ~i~~~~k~~Ir~~Ll~~l~~~~~~ir~ql~~~i~~Ia~~d~P~~Wp~Ll~~l~~~l~s~---~~~~~L~~L~~i~k~~~~  156 (1049)
                      .+|+++|+.||+.+++++.++++.||++++.+++.|+++|||++||++++.+.+.++++   .++++|.+++.++|.+++
T Consensus        77 ~i~~e~k~~Ik~~ll~~l~~~~~~ir~~l~~~i~~I~~~d~p~~Wp~ll~~l~~~l~s~~~~~~~~~L~~l~~i~k~~~~  156 (959)
T d1wa5c_          77 LLPANNVELIKKEIVPLMISLPNNLQVQIGEAISSIADSDFPDRWPTLLSDLASRLSNDDMVTNKGVLTVAHSIFKRWRP  156 (959)
T ss_dssp             SSCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHSTTTCTTHHHHHHTTCCSSCTTHHHHHHHHHHHHHGGGTT
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999999999999999837969999999999999998768402579999999985799999999999999999999876


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC---CC----HHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf             888765444322101356445405999999997999999999751029---96----46999999999998986540687
Q 001585          157 QPTDSTSMKGYRIYEFKSDEERTPVYRIVEETFHHLLNIFNRLVQIVN---PS----LEVADLIKLICKIFWSSIYLEIP  229 (1049)
Q Consensus       157 ~~~~~~~~~~~r~~~~~~~~~~~~l~~i~~~~~p~L~~~~~~~~~~~~---~~----~~~~~~~~~~lki~~~~~~~~lp  229 (1049)
                                    ..++++.+..+..+...++|.+..++........   .+    .......+.++|+|++++..+.|
T Consensus       157 --------------~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (959)
T d1wa5c_         157 --------------LFRSDELFLEIKLVLDVFTAPFLNLLKTVDEQITANENNKASLNILFDVLLVLIKLYYDFNCQDIP  222 (959)
T ss_dssp             --------------SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC--CHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred             --------------HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCH
T ss_conf             --------------513254776799999999999999999999997635241999999999999999999997752046


Q ss_pred             CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             11279234889999999970689999999999466521002789999999999999994898999833399999999963
Q 001585          230 KQLLDPNVFNAWMILFLNVLERPVPSEGEPADPEQRKSWGWWKVKKWTVHILNRLYTRFGDLKLQNPENRAFAQMFQKNY  309 (1049)
Q Consensus       230 ~~~~~~~~l~~w~~~~~~~l~~~~p~~~~~~d~~~~~~~~~~k~kk~~~~~l~~l~~~~~~~~~~~~~~~~f~~~f~~~~  309 (1049)
                      ..+.  +++..|+..|..+++...|...  .+.+......++++|+++++++..+..+|++              +..++
T Consensus       223 ~~~~--~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~--------------~~~~~  284 (959)
T d1wa5c_         223 EFFE--DNIQVGMGIFHKYLSYSNPLLE--DPDETEHASVLIKVKSSIQELVQLYTTRYED--------------VFGPM  284 (959)
T ss_dssp             HHHH--HTHHHHHHHHHHHHSCCSCCCC--------CCCHHHHHHHHHHHHHHHHHHHCHH--------------HHHHH
T ss_pred             HHHH--HHHHHHHHHHHHHHHCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------HHHHH
T ss_conf             9999--9999999999999800553135--8014555028999999999999999998589--------------89999


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHC--HHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHH
Q ss_conf             8999999999999752886359899999999999522780245540--43399999997641365693248644109789
Q 001585          310 AGKILECHLNLLNRIRVGGYLPDRVTNLILQYLSNSISKNSMYNLL--QPRLDVLLFEIVFPLMCFNDNDQKLWDEDPHE  387 (1049)
Q Consensus       310 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~fl~~~~~~~~~~~~~--~~~l~~li~~ii~p~l~l~~~d~e~we~Dp~e  387 (1049)
                      ++.++..+++.+..... .+..+.++..+++|+..+++.+.++..+  .+++..++..+++|+++++++|.+.|++||++
T Consensus       285 ~~~~~~~~~~~l~~~~~-~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~l~~i~~~li~~~~~~~~~d~e~~~~dp~~  363 (959)
T d1wa5c_         285 INEFIQITWNLLTSISN-QPKYDILVSKSLSFLTAVTRIPKYFEIFNNESAMNNITEQIILPNVTLREEDVELFEDDPIE  363 (959)
T ss_dssp             HHHHHHHHHHHHHHCCS-CTTSHHHHHHHHHHHHHHHTSHHHHGGGCSHHHHHHHHHHTHHHHHSCCGGGTTTTTTCHHH
T ss_pred             HHHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHH
T ss_conf             99999999999998833-55528999999999999985178998872046788899999998856787789877506387


Q ss_pred             HHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH---
Q ss_conf             99670675344478888999999999974060209999999999741267997677773236499999999988612---
Q 001585          388 YVRKGYDIIEDLYSPRTASMDFVSELVRKRGKENLQKFIQFIVGIFKRYDETPVEYKPYRQKDGALLAIGALCDKLK---  464 (1049)
Q Consensus       388 fi~~~~d~~~d~~s~R~aa~~ll~~L~~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~~keaal~~lg~la~~l~---  464 (1049)
                      |++++.+. .+.+++|.+|.+++..+++++++.+.+.+++++.+.+++....+..  +|+.+|+++.++|+++....   
T Consensus       364 ~~~~~~~~-~~~~~~r~~a~~ll~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~~e~~~~~~~al~~~~~~~~  440 (959)
T d1wa5c_         364 YIRRDLEG-SDTDTRRRACTDFLKELKEKNEVLVTNIFLAHMKGFVDQYMSDPSK--NWKFKDLYIYLFTALAINGNITN  440 (959)
T ss_dssp             HHHHHHHC-----CHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHBSSCCBT
T ss_pred             HHHHHHHH-CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC--CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             77877400-0002177899999999997534112688999999999751468762--16778899999999986312666


Q ss_pred             ---CCCCCHHHHHHHHHHHHCCCCCC---CCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             ---17973356999999832203679---874105999999997010566893379999999984189999735897999
Q 001585          465 ---QTEPYKSELERMLVQHVFPEFSS---PVGHLRAKAAWVAGQYAHINFSDQNNFRKALHSVVSGLRDPELPVRVDSVF  538 (1049)
Q Consensus       465 ---~~~~~~~~~e~~l~~~v~p~l~~---~~~~lr~ra~~~l~~~~~~~f~~~~~~~~~~~~l~~~l~d~~~~V~~~Aa~  538 (1049)
                         .......++.+++.+++.|.+.+   +++++|+|+||++|+|+++.  .++.+..+++.++++|++++.+||.+||.
T Consensus       441 ~~~~~~~~~~~~~~~l~~~v~~~l~~~~~~~~~lr~~~~~~i~~~~~~~--~~~~~~~~~~~l~~~L~~~~~~V~~~a~~  518 (959)
T d1wa5c_         441 AGVSSTNNLLNVVDFFTKEIAPDLTSNNIPHIILRVDAIKYIYTFRNQL--TKAQLIELMPILATFLQTDEYVVYTYAAI  518 (959)
T ss_dssp             TBCCCBCTTCCHHHHHHHHTHHHHHCSSCSCHHHHHHHHHHHHHTGGGS--CHHHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred             HHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHCCCCHHHHHHHHH
T ss_conf             6552123043499999999999973688750999999999998777412--67889999999998727996158999999


Q ss_pred             HHHHHHHHCC---------CCCCCCCCHHHHHHHHHHHHHHHCH--------HHHHHHHHHHHHHCCCCCCCCHHHHHHH
Q ss_conf             9999997134---------4421002229999999998511111--------2599999999997067644428989999
Q 001585          539 ALRSFVEACR---------DLNEIRPILPQLLDEFFKLMNEVEN--------EDLVFTLETIVDKFGEEMAPYALGLCQN  601 (1049)
Q Consensus       539 aL~~~~~~~~---------~~~~l~p~l~~il~~Ll~ll~~~~~--------e~l~~~l~~iv~~~~~~i~p~~~~l~~~  601 (1049)
                      |+..+++...         ..+.+.|+++++++.++..+.+...        +.+..++..++..+++.+.||+..+++.
T Consensus       519 al~~~~~~~~~~~~~~~~~~~~~l~p~l~~ll~~L~~~l~~~~~~~~~~~~~~~ll~~l~~ii~~~~~~~~~~~~~i~~~  598 (959)
T d1wa5c_         519 TIEKILTIRESNTSPAFIFHKEDISNSTEILLKNLIALILKHGSSPEKLAENEFLMRSIFRVLQTSEDSIQPLFPQLLAQ  598 (959)
T ss_dssp             HHHHHTTCBSCSSSCCBSSCGGGTTTTHHHHHHHHHHHHHTTCCCHHHHTSCHHHHHHHHHHHHHHTTTTGGGHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             99999986600332001032887775699999999999986122025678899999999999998798888899999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
Q ss_conf             99999999830248999998458899999999999998404883779978764899999980136224899999999997
Q 001585          602 LAAAFWRCMNTAEADEDADDPGALAAVGCLRAISTILESVSRLPHLFVQIEPTLLPIMRRMLTTDGQEVFEEVLEIVSYM  681 (1049)
Q Consensus       602 L~~~~~~~~~~~~~d~~~~~~~~~~~~~~l~~i~~ii~~~~~~~~~~~~l~~~~~p~i~~il~~~~~~~~e~~l~ll~~l  681 (1049)
                      |.+.+.+..+    ++    .+....+.++++++.++...  .|+.+..+++.++|++..+++++..++.++++++|+.+
T Consensus       599 l~~~~~~~~~----~~----~~~~~~~~~~e~l~~l~~~~--~~~~~~~l~~~l~p~i~~~~~~~~~~~~~~~~~l~~~~  668 (959)
T d1wa5c_         599 FIEIVTIMAK----NP----SNPRFTHYTFESIGAILNYT--QRQNLPLLVDSMMPTFLTVFSEDIQEFIPYVFQIIAFV  668 (959)
T ss_dssp             HHHHHHHHTT----SC----CCHHHHHHHHHHHHHHHHTS--CGGGHHHHHHHHHHHHHHHHHTTCTTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHC----CC----CCHHHHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf             9999999856----84----23678999999999999842--81359999999999999998433164789999999999


Q ss_pred             HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf             60299899878898999999975558624853588655676147333336688605999999999986189999863472
Q 001585          682 TFFSPTISLEMWSLWPLMMEALADWAIDFFPNILVPLDNYISRGTAHFLTCKEPDYQQSLWSMVSSIMADKNLEDGDIEP  761 (1049)
Q Consensus       682 ~~~~~~isp~l~~l~~~l~~~~~~~~~~~l~~~~~~L~~~i~~~~~~~l~~~~~~~~~~i~~~~~~~l~~~~~~~~~~~~  761 (1049)
                      +++.+.+++.+|++++.++........++++.+..++++|+.++++.+..      ...+++++.+++.....+    ..
T Consensus       669 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~------~~~~l~~~~~~l~~~~~~----~~  738 (959)
T d1wa5c_         669 VEQSATIPESIKPLAQPLLAPNVWELKGNIPAVTRLLKSFIKTDSSIFPD------LVPVLGIFQRLIASKAYE----VH  738 (959)
T ss_dssp             HHHCSSCCTTTGGGHHHHTSGGGGCCTTTHHHHHHHHHHHHHHHGGGCSC------SHHHHHHHHHHHTCTTTH----HH
T ss_pred             HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHCC------HHHHHHHHHHHHCCCCCH----HH
T ss_conf             87477866889999999863788877611899999999999728786446------287999999987798306----89


Q ss_pred             HHHHHHHHHHHCCCC-CHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHCHHHHHHHHHHH--CCCHHHH-HHH
Q ss_conf             445999999854567-302028899999999972124489999999999-98701979999999960--8409999-999
Q 001585          762 APKLIEVVFQNCKGQ-VDHWVEPYLRITVERLRRAEKSYLKCLLVQVIA-DALYYNSSLTLSILHKL--GVATEVF-NLW  836 (1049)
Q Consensus       762 a~~ll~~li~~~~~~-~~~~l~~il~~~l~~L~~~~~~~~~~~~l~v~~-~~~~~~p~~~l~~L~~~--~~~~~~~-~~w  836 (1049)
                      ++.++..+++++++. +.++++.++..++++++..+.+.+...++..++ .+++++|+.+++++++.  +.+..++ ..|
T Consensus       739 ~~~ll~~ii~~~~~~~~~~~l~~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~  818 (959)
T d1wa5c_         739 GFDLLEHIMLLIDMNRLRPYIKQIAVLLLQRLQNSKTERYVKKLTVFFGLISNKLGSDFLIHFIDEVQDGLFQQIWGNFI  818 (959)
T ss_dssp             HHHHHHHHHHHSCHHHHGGGHHHHHHHHHHGGGSSCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTSTTHHHHHHHHTH
T ss_pred             HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCHHHHHHHHHHHH
T ss_conf             99999999997851446768999999999998704608999999999999998719999999999843215899999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf             99899988405455764202569889999987312658999136878999999999999999999972000168877689
Q 001585          837 FQMLQQVKKNGLRVNFKREHDKKVCCLGLTSLLALTADQLPGEALGRVFRATLDLLVAYKEQVAEAAKDEEAEDDDDMDG  916 (1049)
Q Consensus       837 ~~~~~~~~~~~~~~~~~~~~d~Kl~~lal~~Ll~~~~~~l~~~~~~~~~~~~~~ll~~l~~~~~~~~~~~~~~~~~~~~~  916 (1049)
                      +.+.+         ++.+.++||++++|+++|++.++..++  .+..++..++..+.+   . .+.   .+.  ++...+
T Consensus       819 ~~~~~---------~~~~~~~~k~~~l~l~~ll~~~~~~~~--~~~~~~~~~~~~l~~---~-~~~---~~~--~~~~~~  878 (959)
T d1wa5c_         819 ITTLP---------TIGNLLDRKIALIGVLNMVINGQFFQS--KYPTLISSTMNSIIE---T-ASS---QSI--ANLKND  878 (959)
T ss_dssp             HHHGG---------GCCSHHHHHHHHHHHHHHHHSCHHHHH--HCGGGHHHHHHHHHH---H-HHS---CST--TCSCCS
T ss_pred             HHCCC---------CCCCHHHHHHHHHHHHHHHCCCHHHHH--HHHHHHHHHHHHHHH---H-HHC---CCC--CCCCCC
T ss_conf             73141---------039999999999999998658861425--799999999999998---7-626---543--320132


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf             99999888999999787899877761468999999999842399999999988998887778898988845799999999
Q 001585          917 FQTDDEDDDGDGSDKEMGVDAEDGDEADSIRLQKLAAQARAFRPHDEDDDDSDDDFSDDEELQSPIDEVDPFVFFVDTIK  996 (1049)
Q Consensus       917 ~~~~~~~~d~~~~~~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~~vd~~~~~~~~l~  996 (1049)
                      ..    +.+++  ++        .++++.. +..+..               ..+.++| -+.+|.+++|+++||+++++
T Consensus       879 ~~----~~~~~--~~--------~~~~~~~-~~~~~~---------------~~~~~~d-~~~~~~~~~~l~~~~~~~l~  927 (959)
T d1wa5c_         879 YV----DLDNL--EE--------ISTFGSH-FSKLVS---------------ISEKPFD-PLPEIDVNNGVRLYVAEALN  927 (959)
T ss_dssp             CC-----------CC--------CCCTTCC-CCCCGG---------------GCCCCCC-SCTTSCTTTHHHHHHHHHHH
T ss_pred             CH----HCCCC--CC--------CCCCCHH-HHHHHH---------------HHHCCCC-CCCCCCCCHHHHHHHHHHHH
T ss_conf             01----11445--64--------2231202-567998---------------6634369-74457765229999999999


Q ss_pred             HHHHHCH-HHHHHHHCCCCHHHHHHHHHHHH
Q ss_conf             9974090-88999863799999999999999
Q 001585          997 VMQASDP-LRFQNLTQTLEFQYQALANGVAQ 1026 (1049)
Q Consensus       997 ~~~~~~~-~~~~~l~~~l~~~~~~~l~~~~~ 1026 (1049)
                      ++++.+| ..|+.+.++++++.++.|+++++
T Consensus       928 ~~~~~~~~~~~~~~~~~l~~~~~~~L~~~l~  958 (959)
T d1wa5c_         928 KYNAISGNTFLNTILPQLTQENQVKLNQLLV  958 (959)
T ss_dssp             HHHHHTTSCHHHHHGGGSCHHHHHHHHHHHC
T ss_pred             HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHC
T ss_conf             9987597789999997399999999999856
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d2bpta1 a.118.1.1 (A:1-861) Importin beta {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qbkb_ a.118.1.1 (B:) Karyopherin beta2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1qgra_ a.118.1.1 (A:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1u6gc_ a.118.1.2 (C:) Cullin-associated NEDD8-dissociated protein 1 (Tip120) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1b3ua_ a.118.1.2 (A:) Constant regulatory domain of protein phosphatase 2a, pr65alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1ibrb_ a.118.1.1 (B:) Importin beta {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1wa5c_ a.118.1.1 (C:) Exportin Cse1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1wa5b_ a.118.1.1 (B:) Karyopherin alpha {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1q1sc_ a.118.1.1 (C:) Importin alpha {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1xqra1 a.118.1.21 (A:87-350) Hsp70-binding protein 1 (HspBP1) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure
>d1xm9a1 a.118.1.24 (A:244-700) Plakophilin 1 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1jdha_ a.118.1.1 (A:) beta-Catenin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1te4a_ a.118.1.16 (A:) MTH187 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} Back     information, alignment and structure