Citrus Sinensis ID: 001592

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------740-------750-------760-------770-------780-------790-------800-------810-------820-------830-------840-------850-------860-------870-------880-------890-------900-------910-------920-------930-------940-------950-------960-------970-------980-------990------1000------1010------1020------1030------1040------105
MIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAAARKSLASDNTPGEPGRLDASTSPHLYDSEDTMSMGSRTPGGSTPMKFLNIVPDAGSGRESNGSLTAVNHLTKEFEQRRQNFDDDAKALIEIKTTQPASTVHPDVELRKLKMRFETWKKDYKTRLREAKVRLNKLGQSEVEKTRRKWWEKISSRVQ
ccccccccEEEEEEccccEEEEEccccccccccccccHHHHHHcccccHHHHHHHHHHHHcccccccccccEEEEEccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHccccHHHHHHHHHHcHHHHHHccccccccccccccccEEEEEcccccccccccccccccccccccccccccccHHHHHHHHccccHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccEEEEEEcccccccccccHHHHHHHHHccccHHHHHHHHHccEEEEcccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEccccccccccHHHHHHHHHcHHHHHHHHHHHHHHHHcccccccccccEEcccccHHHHHHHHcccccccccHHccccccccccHHHHHHHHHHHccccccccccccccEEEEEccEEEcccccHHccccccccHHHHHHHHHccHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHccccccEEEEcccccccccccccHHHHHHHHHcccHHHHHHHccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccc
cEEEEcccEEEEEEccccEEEEcccccccccccccccHHHHHHHHHcccHHHHHHHHHHHHHccEEEccccEEEEEccccccccccHHHHHHHcccccccccHHHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHHHcccccHHHHHHHHcHHHHHHccccEccccccccccEEEEEEEccccEEEcccEEHHHHHHccEEEEccccccHHHHHHHHccccHHHHHHHccccccHccEEccccEEEEcccccHHHHHHHHHHHHHEcccHHHHHHHHHHHHHHHHHccEEEEEccccccccccccHHHHHHHHHHcccHHHHHHHHcccEEEEcccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEcccHEcccccHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHccccEEEEEEcccHHHHHHHHcccccHHHHHHHHHccccccHHHHHHHHHHHHcccccccccccccEEEEEEccEEEEEccHHHHcccccccHHHHHHHHHcccHHHHHHcccccHcccccccccccccccccccHHHHHHHHHHHHHHHHHccccccEEEEEcccccccccccccHHHHHHHcccccEEEEEEccccccccHHHHHHHHHHHHccHcccccccHHHHHHHHHHHccccccccEEcccEEEEHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccEccccccccccccccccHHHHHHHHHHHHHHHcccccccHHEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHEHHHccccccccccccEccccccccc
MIQSTSGDEAFVLLSNGnvvkvstgellpanpdileGVDDLIQlsylnepsvlnniqyrysrdmiyskagpvliavnpfkavpiygnKFITAYRQkvmdsphvyaIADTAYnemmgdgvnQSIIIsgesgagktETAKFAMQYLAAlgggsegieYEILQTNHILEAfgnaktsrndnssrFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNlkvandynylnqsecltidgvddaQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNIsfqvidnenhvEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEvgkqctgrsinildiygfesfkknSFEQFCINYANERLQQHFNRHLFKLEQEeyeldgvdwtrvefedNEECLNliekkplgvlslldeesnfpkatdLTFANKLKqhlgsnscfkgergrAFSIRhyagevpydtngfleknrdplQTDIIQLLSSCTCQVLQLFAskmlkpspkpaassqpgaldtqkqsvgtkfKGQLFKLMHQLEntrphfircikpnskqlpgiyeeDLVLQQFRCCGVLEIVRIsrsgyptrmrhqefaGRYGVLLsekqlsqdplSISVAVLQQFnvlpemyqvgYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGvitlqsfargenTRRRHASlgkscsavvpeIRDEQLREIICLQSAIRGWLVRKQLKMHklkqsnpvnakvkrrsgrkssdmkdvpqEQVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAAARKSlasdntpgepgrldastsphlydsedtmsmgsrtpggstpmkflnivpdagsgresngslTAVNHLTKEFEQRRQNFDDDAKALIEIkttqpastvhpdvELRKLKMRFETWKKDYKTRLREAKVRLNKLGQSEVEKTRRKWWEKISSRVQ
MIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLevgkqctgrSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQhlgsnscfkgeRGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRisrsgyptrMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITlqsfargentrrrhaslgkscsavvPEIRDEQLREIICLQSAIRGWLVRKQLKmhklkqsnpvnakvkrrsgrkssdmkdvpqeqVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAAARKSLAsdntpgepgrldastsphLYDSEDTMSMGSRTPGGSTPMKFLNIVPDAGSGRESNGSLTAVNHLTKEFEQRRQNFDDDAKALIeikttqpastvhpdvelrklkmrfetwkkdyktrlreakvrlnklgqsevektrrkWWEKISSRVQ
MIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFaskmlkpspkpaassqpgaLDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAAARKSLASDNTPGEPGRLDASTSPHLYDSEDTMSMGSRTPGGSTPMKFLNIVPDAGSGRESNGSLTAVNHLTKEFEQRRQNFDDDAKALIEIKTTQPASTVHPDVELRKLKMRFETWKKDYKTRLREAKVRLNKLGQSEVEKTRRKWWEKISSRVQ
*********AFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNA*********RFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFAS****************************FKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGE********LGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLK**********************************************************************YDAKWLEY****************************************************************************************************************I*************DVELRKLKMRFETWKKDYKTRLREAKVR*************************
MI****GDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISF***************AVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFA*****************************FKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQL*QDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQE**QAL**********************************************************************************************************************************************************************************************************************KI*****
MIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKML********************SVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARG*************CSAVVPEIRDEQLREIICLQSAIRGWLVRKQLK*******************************QVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQK*****************************ASTSPHLYDSEDTMSMGSRTPGGSTPMKFLNIVPDAGSGRESNGSLTAVNHLTKEFEQRRQNFDDDAKALIEIKTTQPASTVHPDVELRKLKMRFETWKKDYKTRLREAKVRLNKLGQSEVEKTRRKWWEKISSRVQ
MIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASK*********************QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRRVLKAEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAA*************************************************************GSLTAVNHLTKEFEQRRQNFDDDAKALIEIKTTQPASTVHPDVELRKLKMRFETWKKDYKTRLREAKVRLNKLG********************
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
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MIQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTAxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxMKSMEEMWQKQMASLQMSLAAARKSLASDNTPGEPGRLDASTSPHLYDSEDTMSMGSRTPGGSTPMKFLNIVPDAGSGRESNGSLTAVNHLTKEFEQRRQNFDDDAKALIEIKTTQPASTVHPDVELRKLKMRFETWxxxxxxxxxxxxxxxxxxxxxEVEKTRRKWWEKISSRVQ
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query1048 2.2.26 [Sep-21-2011]
P54697 2245 Myosin-J heavy chain OS=D yes no 0.822 0.383 0.391 0.0
Q02440 1829 Unconventional myosin-Va yes no 0.729 0.417 0.428 1e-173
P08799 2116 Myosin-2 heavy chain OS=D no no 0.652 0.323 0.452 1e-172
Q9Y4I1 1855 Unconventional myosin-Va yes no 0.724 0.409 0.427 1e-172
Q99104 1853 Unconventional myosin-Va yes no 0.727 0.411 0.427 1e-171
Q9QYF3 1828 Unconventional myosin-Va yes no 0.724 0.415 0.427 1e-170
P70569 1846 Unconventional myosin-Vb no no 0.823 0.467 0.381 1e-169
P21271 1818 Unconventional myosin-Vb no no 0.722 0.416 0.416 1e-168
P05659 1509 Myosin-2 heavy chain, non N/A no 0.807 0.560 0.390 1e-168
Q9ULV0 1848 Unconventional myosin-Vb no no 0.825 0.468 0.382 1e-166
>sp|P54697|MYOJ_DICDI Myosin-J heavy chain OS=Dictyostelium discoideum GN=myoJ PE=4 SV=2 Back     alignment and function desciption
 Score =  654 bits (1688), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 376/960 (39%), Positives = 578/960 (60%), Gaps = 98/960 (10%)

Query: 5    TSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDM 64
            TS D+  V   +   VK+   ++   NPDILEGVDDL  LS+L+EP++L+N+ +RY+ + 
Sbjct: 50   TSADQVLVRTEDDREVKIPLSKVFQKNPDILEGVDDLSFLSHLHEPAILHNLHHRYNLNQ 109

Query: 65   IYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS--PHVYAIADTAYNEMMGDGVNQS 122
            IY+  G +LIA+NP+ ++P+YG + I+AY  K + +  PHVYA+A+ A+ +M  DG +QS
Sbjct: 110  IYTYIGKILIAINPYTSLPLYGKEMISAYYGKQLGTLAPHVYAVAEDAFKDMRYDGTSQS 169

Query: 123  IIISGESGAGKTETAKFAMQYLAALGG----------------GSEGI------------ 154
            I++SGESGAGKTET KF +QY AA+G                  S+GI            
Sbjct: 170  ILVSGESGAGKTETTKFLLQYFAAMGNMIKESTSSSSINGINTSSDGIPVTPPPSPMKKS 229

Query: 155  ------EYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEK 208
                  E  +L++  +LEAFGNAKT RNDNSSRFGK IEIHF+  G I GAKI T+LLEK
Sbjct: 230  PVDKSVEERVLESTPLLEAFGNAKTLRNDNSSRFGKFIEIHFNEMGSIIGAKILTYLLEK 289

Query: 209  SRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 268
            SR+V+    ER+YHIFYQL +GA   LKE+LNLK   +Y+YLN+S C  I+GV D ++F+
Sbjct: 290  SRIVRQVYNERNYHIFYQLLSGASEELKEKLNLKTIEEYSYLNKSGCFEIEGVSDEEHFN 349

Query: 269  NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVI--DNENHVEVIADEAVTTAAMLM 326
                A+ +  I   ++E  F +L+A+L +GN  F+ I   N++  ++I  + +   ++L+
Sbjct: 350  KTCHAMQVAGITLVEQENVFRILSAILLIGNFEFENIAGSNDDSCQLIDRDPLEKVSVLL 409

Query: 327  GCSS-DELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSL 385
            GC+  DEL+ ++ T K+  GK+S     T ++A ++RD+L+ F+YG +FDW+V +IN S+
Sbjct: 410  GCAQPDELLNSMLTRKVVTGKESYISHNTKERAENARDSLSMFLYGMMFDWLVVKINSSM 469

Query: 386  EVGKQCTGRS-INILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDG 444
             +  Q   +S I +LDIYGFESF+ N FEQFCINYANE+LQQ FN+H+FK EQ+EY  + 
Sbjct: 470  SISTQQKSKSFIGVLDIYGFESFEVNGFEQFCINYANEKLQQLFNQHVFKEEQQEYIKEK 529

Query: 445  VDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGE 504
            +DW+ ++F DN++ L+LIEKKP+ +L+LLDEE+ FPKAT  T A KL   + S+S F+  
Sbjct: 530  IDWSYIDFNDNQDTLDLIEKKPICILTLLDEETMFPKATPQTLATKLYSKMTSHSKFEKP 589

Query: 505  R--GRAFSIRHYAGEVPYDTNGFLEKNRD---PLQTDIIQLLSSCTCQVLQLFASKMLK- 558
            R    AF+I HYAG+V Y+T+ FL+KN+D   P Q  I+Q  +    +VL   + K  + 
Sbjct: 590  RFSSTAFTINHYAGKVTYETDQFLDKNKDFIIPEQISILQRSNFSFIKVLMSHSDKFTQS 649

Query: 559  PSPKPAASSQPGALDTQKQ---------SVGTKFKGQLFKLMHQLENTRPHFIRCIKPNS 609
            P   P  +  P + +T+           SVG++F   L  LM  +  T PH++RCIKPN 
Sbjct: 650  PGGHPQGNGGPTSSNTKGTSGSSSMKFLSVGSQFSTSLATLMKTISTTTPHYVRCIKPNP 709

Query: 610  KQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLL----------- 658
            ++LP  + +  V+ Q RC GV+E VRI  +G+PTR    EF  RY +L            
Sbjct: 710  EKLPQTFNKQDVIHQLRCGGVMESVRICCAGFPTRRLLSEFYQRYKILYVKDINTGSGGG 769

Query: 659  ---SEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRR-KQVLQAII 714
               S     +DP  +   +L    +  + Y++G TK++LR+GQLA+LED R +Q+ ++  
Sbjct: 770  KKGSNNNKIKDPKILVQNLLTGIELSDDKYKIGLTKVFLRAGQLASLEDMRLEQLDRSAT 829

Query: 715  RLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVV----------- 763
             +QK ++GY  R R+++L +  + +Q+  R  + +++ ++L ++ SA++           
Sbjct: 830  VIQKRWKGYLYRKRYKQLRDASLIIQTKLRSVHAKQQLSALQRTHSAILIQKVWRAHRDR 889

Query: 764  ---PEIRDEQLREIICLQSAIRGWLVRKQLKMHKLKQSNPV-NAKVKRRSGRKSSDMKDV 819
                +IRD  L+    LQ+ +R  L  +Q+   + + +  +   K+++   ++  D K  
Sbjct: 890  VQYQKIRDASLQ----LQTVMRRHLFSEQVHRERCENAAIILQTKIRQILSKREVDKKLR 945

Query: 820  PQEQVQALPTALAELQRRV---LKAEA-TLGQKEEENAALREQLQQYDAKW-LEYEAKMK 874
                +QA      +L +RV   L+AEA +L   +E+   L+E+L+  + +W L  EAK K
Sbjct: 946  GIILIQA--RWRMKLAKRVYIQLRAEARSLRTVQEQKNKLQEKLE--ELQWRLTSEAKRK 1001
Processive motor protein that can move over long distances along F-actin without disassociating; processiveness depends on high physiological Mg(2+) concentrations. Presents a high actin affinity in the presence of ADP, fast ATP hydrolysis, and a high steady-state ATPase activity in the presence of actin that is rate limited by ADP release. Physiological decrease of free Mg(2+) ions leads to an increased rate of ADP release and shortening of the fraction of time it spends in the strong acting binding states.
Dictyostelium discoideum (taxid: 44689)
>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1 Back     alignment and function description
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3 Back     alignment and function description
>sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2 Back     alignment and function description
>sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2 Back     alignment and function description
>sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1 Back     alignment and function description
>sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1 Back     alignment and function description
>sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2 Back     alignment and function description
>sp|P05659|MYSN_ACACA Myosin-2 heavy chain, non muscle OS=Acanthamoeba castellanii PE=3 SV=1 Back     alignment and function description
>sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1048
356546900 1196 PREDICTED: myosin-J heavy chain-like [Gl 0.990 0.867 0.724 0.0
356542250 1196 PREDICTED: myosin-J heavy chain-like [Gl 0.988 0.866 0.712 0.0
255569583 1223 myosin vIII, putative [Ricinus communis] 0.993 0.851 0.724 0.0
2241230281016 predicted protein [Populus trichocarpa] 0.964 0.995 0.722 0.0
225461317 1229 PREDICTED: myosin-J heavy chain-like [Vi 0.982 0.838 0.717 0.0
302143081 1197 unnamed protein product [Vitis vinifera] 0.986 0.863 0.715 0.0
2241150741055 predicted protein [Populus trichocarpa] 0.975 0.968 0.699 0.0
110738812 1220 myosin heavy chain [Arabidopsis thaliana 0.983 0.845 0.692 0.0
145334819 1220 myosin 2 [Arabidopsis thaliana] gi|33200 0.983 0.845 0.692 0.0
4990451101 myosin [Arabidopsis thaliana] 0.982 0.935 0.692 0.0
>gi|356546900|ref|XP_003541859.1| PREDICTED: myosin-J heavy chain-like [Glycine max] Back     alignment and taxonomy information
 Score = 1561 bits (4041), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 761/1050 (72%), Positives = 889/1050 (84%), Gaps = 12/1050 (1%)

Query: 2    IQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYS 61
            IQSTSG+EA V LSNGNV+KVS  ELLPANPDILEGV+DLIQLSYLNEPSVL+N+Q RYS
Sbjct: 154  IQSTSGEEASVSLSNGNVMKVSRSELLPANPDILEGVEDLIQLSYLNEPSVLHNLQSRYS 213

Query: 62   RDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQ 121
            +DMIYSK+GP+LIA+NPFK V IYG+ +I+AYRQK+MD PHVYA+AD AYNEMM D VNQ
Sbjct: 214  QDMIYSKSGPILIALNPFKDVQIYGDDYISAYRQKLMDKPHVYAMADAAYNEMMRDEVNQ 273

Query: 122  SIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSR 181
            SIIISGESG+GKTETAK AMQYLAALGGG  GIE E+LQTN ILEAFGNAKTSRNDNSSR
Sbjct: 274  SIIISGESGSGKTETAKIAMQYLAALGGGCSGIENEVLQTNFILEAFGNAKTSRNDNSSR 333

Query: 182  FGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNL 241
            FGKLIEIHFSA GKICGA +QTFLLEKSRVVQLA GERSYHIFYQLCAG+ S LKERLNL
Sbjct: 334  FGKLIEIHFSAMGKICGAIVQTFLLEKSRVVQLALGERSYHIFYQLCAGSSSDLKERLNL 393

Query: 242  KVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNIS 301
            + A++Y YLNQS+C+TIDGVDDA+ FH LM+ALD++ + KE++E  F MLAA+LWLGNIS
Sbjct: 394  RAASEYKYLNQSDCMTIDGVDDAKKFHRLMKALDVIRMCKEEQELVFKMLAAILWLGNIS 453

Query: 302  FQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDS 361
            FQ  DNENH+EV+ DEAVT AA+LMGCSS ELM ALST KIQAGKD+I K LTL+QAID+
Sbjct: 454  FQDTDNENHIEVVNDEAVTNAALLMGCSSHELMEALSTRKIQAGKDTITKTLTLRQAIDA 513

Query: 362  RDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYAN 421
            RDALAKFIY SLFDW+VEQ+NKSLEVGK+ TGRSI+ILDIYGFESF+ NSFEQFCINYAN
Sbjct: 514  RDALAKFIYASLFDWLVEQVNKSLEVGKRRTGRSISILDIYGFESFQNNSFEQFCINYAN 573

Query: 422  ERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPK 481
            ERLQQHFNRHLFKLEQE+YELDG+DWT+V+FEDN+ CL+L EK+PLG+LSLLDEESNFP+
Sbjct: 574  ERLQQHFNRHLFKLEQEDYELDGIDWTKVDFEDNQACLDLFEKRPLGLLSLLDEESNFPR 633

Query: 482  ATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL 541
            A+DLT ANKLKQHL +N CFKGERGRAFS+ HYAGEV YDT+GFLEKNRDPL +D IQLL
Sbjct: 634  ASDLTLANKLKQHLHANPCFKGERGRAFSVCHYAGEVLYDTSGFLEKNRDPLPSDSIQLL 693

Query: 542  SSCTCQVLQLFASKMLKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHF 601
            SSC+C++LQLF SK L  S K + S   GALD+QKQSVGTKFKGQLFKLMHQLE+T PHF
Sbjct: 694  SSCSCELLQLF-SKTLNQSQKQSNSLYGGALDSQKQSVGTKFKGQLFKLMHQLESTTPHF 752

Query: 602  IRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEK 661
            IRCIKPN+KQ PGIY+EDLVLQQ +CCGVLE+VRISR+GYPTRM HQEF+ RYG LLSE 
Sbjct: 753  IRCIKPNTKQHPGIYDEDLVLQQLKCCGVLEVVRISRAGYPTRMTHQEFSQRYGFLLSEA 812

Query: 662  QLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFR 721
              SQDPLSISVA+LQQFN+ PEMYQVG+TKLYLR+GQ+ ALEDRR+ +LQ I+ +QK FR
Sbjct: 813  NTSQDPLSISVAILQQFNIPPEMYQVGFTKLYLRTGQIGALEDRRQHLLQGILGIQKSFR 872

Query: 722  GYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAI 781
            GYQAR  + EL NGV  LQSF RGE  RR++  + KS   +  E   E+++    LQS I
Sbjct: 873  GYQARCHYHELKNGVTILQSFVRGEIARRKYGVMVKSSMTITFE-NIEEIQAATTLQSVI 931

Query: 782  RGWLVRKQLK-MHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRRVLK 840
            RGWLVR+    +HK K+S P NA+ +RRS  K  ++KDV  E+ Q LP+ALAELQRRV+K
Sbjct: 932  RGWLVRRHASGLHKSKKS-PENARSRRRSRVKMPEVKDVSSERGQNLPSALAELQRRVIK 990

Query: 841  AEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAAARKSLAS 900
            AEAT+ QKEEENA L+EQL+Q++ +W+EYE +MKSMEEMWQKQM+SLQMSLAAARKSLAS
Sbjct: 991  AEATIEQKEEENAELKEQLKQFERRWIEYEKRMKSMEEMWQKQMSSLQMSLAAARKSLAS 1050

Query: 901  DNTPGEPGRLDASTSPHLYDSEDTMSMGS---RTPGGSTPMKFLNIVPDAGSGRESNGSL 957
            +N  G+  R D + SP  YDSED  SMGS   RTP  STP+K+ + + +AG+GR+ NG+L
Sbjct: 1051 ENVSGQIARRDVA-SPLGYDSEDAASMGSRTPRTPHASTPLKYSSSLTEAGAGRDVNGTL 1109

Query: 958  TAVNHLTKEFEQRRQNFDDDAKALIEIKTTQPASTVHPDVELRKLKMRFETWKKDYKTRL 1017
            T+V++L KEFEQRR  FDDDA+AL+EIKT Q A+T   + ELRKLK RFE WKK+YK RL
Sbjct: 1110 TSVSNLMKEFEQRRHTFDDDARALVEIKTGQSANTNSVE-ELRKLKHRFEGWKKEYKARL 1168

Query: 1018 REAKVRLNKLGQSEVEKTRRKWWEKISSRV 1047
            RE K RL+K   SE+EK+RR+WW K+SSR 
Sbjct: 1169 RETKARLHK---SEMEKSRRRWWGKLSSRA 1195

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|356542250|ref|XP_003539582.1| PREDICTED: myosin-J heavy chain-like [Glycine max] Back     alignment and taxonomy information
>gi|255569583|ref|XP_002525757.1| myosin vIII, putative [Ricinus communis] gi|223534907|gb|EEF36593.1| myosin vIII, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|224123028|ref|XP_002330423.1| predicted protein [Populus trichocarpa] gi|222871808|gb|EEF08939.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|225461317|ref|XP_002281748.1| PREDICTED: myosin-J heavy chain-like [Vitis vinifera] Back     alignment and taxonomy information
>gi|302143081|emb|CBI20376.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|224115074|ref|XP_002316933.1| predicted protein [Populus trichocarpa] gi|222859998|gb|EEE97545.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|110738812|dbj|BAF01329.1| myosin heavy chain [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|145334819|ref|NP_001078755.1| myosin 2 [Arabidopsis thaliana] gi|332009096|gb|AED96479.1| myosin 2 [Arabidopsis thaliana] Back     alignment and taxonomy information
>gi|499045|emb|CAA84065.1| myosin [Arabidopsis thaliana] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query1048
TAIR|locus:21625501220 ATM2 "myosin 2" [Arabidopsis t 0.982 0.844 0.686 0.0
TAIR|locus:20119221153 VIIIA [Arabidopsis thaliana (t 0.874 0.794 0.624 1.3e-304
UNIPROTKB|F1LUM1 1818 Myo5b "Unconventional myosin-V 0.600 0.345 0.442 2.2e-174
UNIPROTKB|F1M3R4 1844 Myo5b "Unconventional myosin-V 0.600 0.341 0.442 2.7e-174
MGI|MGI:106598 1818 Myo5b "myosin VB" [Mus musculu 0.600 0.345 0.442 4.6e-174
RGD|621347 1846 Myo5b "myosin Vb" [Rattus norv 0.600 0.340 0.442 1.3e-173
UNIPROTKB|P70569 1846 Myo5b "Unconventional myosin-V 0.600 0.340 0.442 1.3e-173
UNIPROTKB|F1PX71 1823 MYO5B "Uncharacterized protein 0.600 0.345 0.443 2e-173
TAIR|locus:2007938 1520 MYA1 "myosin 1" [Arabidopsis t 0.805 0.555 0.414 3.6e-163
RGD|1309994 1741 Myo5c "myosin VC" [Rattus norv 0.732 0.441 0.416 2.3e-162
TAIR|locus:2162550 ATM2 "myosin 2" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 3661 (1293.8 bits), Expect = 0., P = 0.
 Identities = 722/1051 (68%), Positives = 849/1051 (80%)

Query:     2 IQSTSGDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYS 61
             IQSTS D + V+LS  NVVKVST EL PANPDILEGV+DLIQLSYLNEPSVL N++ RY 
Sbjct:   179 IQSTSADTSLVMLSTANVVKVSTEELFPANPDILEGVEDLIQLSYLNEPSVLYNLRVRYL 238

Query:    62 RDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQ 121
             +D+IYSKAGPVLIAVNPFK V IYGN  I+AY++KVMD+PHVYA+AD AY+EMM +  NQ
Sbjct:   239 QDVIYSKAGPVLIAVNPFKNVEIYGNDVISAYQKKVMDAPHVYAVADAAYDEMMREEKNQ 298

Query:   122 SIIISGESGAGKTETAKFAMQYLAALGGGSEGIEYEILQTNHILEAFGNAKTSRNDNSSR 181
             S+IISGESGAGKTETAKFAMQYLAALGGGS G+EYEIL+T  ILEAFGNAKTSRN NSSR
Sbjct:   299 SLIISGESGAGKTETAKFAMQYLAALGGGSCGVEYEILKTTCILEAFGNAKTSRNANSSR 358

Query:   182 FGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNL 241
             FGKLIEIHFSA GKICGAK++TFLLEKSRVVQL  GERSYHIFY+LCAGA   LKERL L
Sbjct:   359 FGKLIEIHFSAMGKICGAKLETFLLEKSRVVQLFNGERSYHIFYELCAGASPILKERLKL 418

Query:   242 KVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNIS 301
             K A++Y YL+QS+CLTI GVDDAQ FH L+EA DIV I KE +E+ FA+LAAVLWLGN+S
Sbjct:   419 KTASEYTYLSQSDCLTIAGVDDAQKFHKLLEAFDIVQIPKEHQERAFALLAAVLWLGNVS 478

Query:   302 FQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDS 361
             F+V DNENHVEV+ADEAV  AAMLMGC+++ELM+ LST K+QAG D IAKKLTL+QA D 
Sbjct:   479 FRVTDNENHVEVVADEAVANAAMLMGCNTEELMVVLSTRKLQAGTDCIAKKLTLRQATDM 538

Query:   362 RDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSFEQFCINYAN 421
             RD +AKFIY +LFDW+VEQIN +LEVGK  TGRSI+ILDIYGFESFK NSFEQFCINYAN
Sbjct:   539 RDGIAKFIYANLFDWLVEQINIALEVGKSRTGRSISILDIYGFESFKNNSFEQFCINYAN 598

Query:   422 ERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPK 481
             ERLQQHFNRHLFKLEQEEYE DG+DWT+VEF DN+ECL+LIEKKP+G+LSLLDEESNFPK
Sbjct:   599 ERLQQHFNRHLFKLEQEEYEEDGIDWTKVEFVDNQECLDLIEKKPIGLLSLLDEESNFPK 658

Query:   482 ATDLTFANKLKQHLGSNSCFKGERGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL 541
             ATDLTFANKLKQHL +NSCFKGERGRAF + HYAGEV YDTNGFLEKNRDPL  D+I LL
Sbjct:   659 ATDLTFANKLKQHLKTNSCFKGERGRAFRVNHYAGEVLYDTNGFLEKNRDPLPADLINLL 718

Query:   542 SSCTCQVLQLFXXXXXXXXXXXXXXXXXXXLDTQKQSVGTKFKGQLFKLMHQLENTRPHF 601
             SSC CQ+L+LF                    D+  Q+VGTKFKGQLFKLM++LENT PHF
Sbjct:   719 SSCDCQLLKLFSTKMRGKSQKPLMLS-----DSTNQTVGTKFKGQLFKLMNKLENTSPHF 773

Query:   602 IRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEK 661
             IRCIKPNSKQLP +YEEDLVLQQ RCCGVLE+VRISRSGYPTR+ HQEFAGRYG LLS+K
Sbjct:   774 IRCIKPNSKQLPRVYEEDLVLQQLRCCGVLEVVRISRSGYPTRLTHQEFAGRYGFLLSDK 833

Query:   662 QLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQAIIRLQKCFR 721
             +++QDPLS+S+AVL+Q++V PEMYQVGYTKLYLR+GQ+   EDRRK+VLQ I+ LQK FR
Sbjct:   834 KVAQDPLSVSIAVLKQYDVHPEMYQVGYTKLYLRTGQIGIFEDRRKKVLQGIVGLQKHFR 893

Query:   722 GYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPEIRDEQLREIICLQSAI 781
             G+ +R+ F+ +    + LQS+ RGEN RR   +  K  +  V E   ++L  +I LQSA+
Sbjct:   894 GHLSRAYFQNMRKVTLVLQSYIRGENARRLFDTEAKFHADSVSEASTDELSAVIHLQSAV 953

Query:   782 RGWLVRKQLK-MHKLKQSNPVNAKVKRRSGRKSSDMKDVPQEQVQALPTALAELQRRVLK 840
             RGWL RK    M + K+   V  K KR++GR+ S+ KD+P EQ Q  PT++++LQ+R+LK
Sbjct:   954 RGWLARKHFNSMQRQKELRNVATKSKRKAGRRISEDKDIPLEQPQVQPTSMSDLQKRILK 1013

Query:   841 AEATLGQKEEENAALREQLQQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAAARKSLAS 900
             +EA L QKEEEN ALREQL+Q++ +W EY+ KMKSMEE WQKQM+SLQMSLAAARKSLA+
Sbjct:  1014 SEAALSQKEEENTALREQLRQFEERWSEYDIKMKSMEETWQKQMSSLQMSLAAARKSLAA 1073

Query:   901 DNTPGEPG-RLDASTSPHLYDSEDTMSMGSRTPGGSTPM-KFLN-IVPDAGSGRESNGSL 957
             ++  G+ G R D S SP  YDSEDTMS G  TPG  TP  KF N   P+    RE NGSL
Sbjct:  1074 ESITGQAGGRQDTSISPFGYDSEDTMSTG--TPGVRTPTNKFTNGNTPELRI-RELNGSL 1130

Query:   958 TAVNHLTKEFEQRRQNFDDDAKALIEIK-----TTQPASTVHPDVELRKLKMRFETWKKD 1012
              AVNHL +EF+QRR NFD+DA+A++E+K     T       HP+ E R+LK+RFETWKKD
Sbjct:  1131 NAVNHLAREFDQRRLNFDEDARAIVEVKLGPQATPNGQQQQHPEDEFRRLKLRFETWKKD 1190

Query:  1013 YKTRLREAKVRLNKLGQSEVEKTR-RKWWEK 1042
             YK RLR+ K RL+++   + +K R RKWW K
Sbjct:  1191 YKARLRDTKARLHRV---DGDKGRHRKWWGK 1218
GO:0003774 "motor activity" evidence=IEA;ISS
GO:0005524 "ATP binding" evidence=IEA
GO:0005737 "cytoplasm" evidence=ISM
GO:0016459 "myosin complex" evidence=IEA;ISS
GO:0030048 "actin filament-based movement" evidence=TAS
GO:0005886 "plasma membrane" evidence=IDA
TAIR|locus:2011922 VIIIA [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
UNIPROTKB|F1LUM1 Myo5b "Unconventional myosin-Vb" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1M3R4 Myo5b "Unconventional myosin-Vb" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
MGI|MGI:106598 Myo5b "myosin VB" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|621347 Myo5b "myosin Vb" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|P70569 Myo5b "Unconventional myosin-Vb" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
UNIPROTKB|F1PX71 MYO5B "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
TAIR|locus:2007938 MYA1 "myosin 1" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
RGD|1309994 Myo5c "myosin VC" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Fail to connect to STRING server

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1048
cd01383677 cd01383, MYSc_type_VIII, Myosin motor domain, plan 0.0
smart00242677 smart00242, MYSc, Myosin 0.0
cd00124679 cd00124, MYSc, Myosin motor domain 0.0
cd01377693 cd01377, MYSc_type_II, Myosin motor domain, type I 0.0
pfam00063679 pfam00063, Myosin_head, Myosin head (motor domain) 0.0
cd01384674 cd01384, MYSc_type_XI, Myosin motor domain, plant- 0.0
cd01380691 cd01380, MYSc_type_V, Myosin motor domain, type V 0.0
COG5022 1463 COG5022, COG5022, Myosin heavy chain [Cytoskeleton 0.0
cd01378674 cd01378, MYSc_type_I, Myosin motor domain, type I 0.0
cd01381671 cd01381, MYSc_type_VII, Myosin motor domain, type 0.0
cd01387677 cd01387, MYSc_type_XV, Myosin motor domain, type X 0.0
cd01385692 cd01385, MYSc_type_IX, Myosin motor domain, type I 0.0
cd01382717 cd01382, MYSc_type_VI, Myosin motor domain, type V 1e-174
cd01379653 cd01379, MYSc_type_III, Myosin motor domain, type 1e-163
PTZ00014821 PTZ00014, PTZ00014, myosin-A; Provisional 1e-147
cd01386767 cd01386, MYSc_type_XVIII, Myosin motor domain, typ 8e-75
cd01363186 cd01363, Motor_domain, Myosin and Kinesin motor do 6e-14
smart0001523 smart00015, IQ, Calmodulin-binding motif 0.002
>gnl|CDD|238679 cd01383, MYSc_type_VIII, Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information 
 Score = 1295 bits (3352), Expect = 0.0
 Identities = 540/678 (79%), Positives = 594/678 (87%), Gaps = 1/678 (0%)

Query: 29  PANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNK 88
           PANPDIL+GVDDL+QLSYLNEPSVL N+QYRYS+D+IY+KAGPVL+AVNPFK VP+YGN 
Sbjct: 1   PANPDILDGVDDLMQLSYLNEPSVLYNLQYRYSQDLIYTKAGPVLVAVNPFKEVPLYGND 60

Query: 89  FITAYRQKVMDSPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALG 148
           +I AYR+K  DSPHVYAIADTAYNEMM D VNQSIIISGESGAGKTETAK AMQYLA+LG
Sbjct: 61  YIEAYRKKSNDSPHVYAIADTAYNEMMRDEVNQSIIISGESGAGKTETAKIAMQYLASLG 120

Query: 149 GGSEGIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEK 208
           GGS GIEYEILQTN ILEAFGNAKTSRNDNSSRFGKLIEIHFS  GKI GAKIQTFLLEK
Sbjct: 121 GGS-GIEYEILQTNPILEAFGNAKTSRNDNSSRFGKLIEIHFSETGKISGAKIQTFLLEK 179

Query: 209 SRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFH 268
           SRVVQ A GERSYHIFYQLCAGAP  LKE+LNLK A++Y YL QS C +I+GVDDAQ FH
Sbjct: 180 SRVVQCARGERSYHIFYQLCAGAPPALKEKLNLKSASEYKYLKQSCCYSINGVDDAQRFH 239

Query: 269 NLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGC 328
            L+EALDIV I KED+E  FAMLAAVLWLGN+SF VIDNENHVE +ADEA++TAA L+GC
Sbjct: 240 TLVEALDIVHISKEDQENVFAMLAAVLWLGNVSFTVIDNENHVEPVADEALSTAAKLIGC 299

Query: 329 SSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVG 388
           + ++LMLALST K+    D+I +KLTLQQAID+RDALAK IY SLFDW+VEQINKSLEVG
Sbjct: 300 NIEDLMLALSTRKMHVNNDNIVQKLTLQQAIDARDALAKSIYASLFDWLVEQINKSLEVG 359

Query: 389 KQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWT 448
           K+ TGRSI+ILDIYGFESF KNSFEQFCINYANERLQQHFNRHLFKLEQEEYE DG+DWT
Sbjct: 360 KRRTGRSISILDIYGFESFDKNSFEQFCINYANERLQQHFNRHLFKLEQEEYEEDGIDWT 419

Query: 449 RVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGRA 508
           +VEFEDN+ECL+L EKKPLG+LSLLDEES FP ATDLTFANKLKQHL +NSCF+GERG A
Sbjct: 420 KVEFEDNQECLDLFEKKPLGLLSLLDEESTFPNATDLTFANKLKQHLKTNSCFRGERGGA 479

Query: 509 FSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVLQLFASKMLKPSPKPAASSQ 568
           F++RHYAGEV YDT GFLEKNRD L +D IQLLSSC CQ+ QLFAS ML  SP       
Sbjct: 480 FTVRHYAGEVTYDTTGFLEKNRDLLHSDSIQLLSSCKCQLPQLFASSMLIQSPVVGPLYV 539

Query: 569 PGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCC 628
             A D+QK SVGTKFKGQLFKLM QLENT PHFIRCIKPN+KQLPGIYE+ LVLQQ RCC
Sbjct: 540 ASAADSQKLSVGTKFKGQLFKLMQQLENTTPHFIRCIKPNNKQLPGIYEQGLVLQQLRCC 599

Query: 629 GVLEIVRISRSGYPTRMRHQEFAGRYGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVG 688
           GVLE+VRISRSGYPTRM HQEFA RYG LL E   SQDPLS+SVA+LQQFN+LPEMYQVG
Sbjct: 600 GVLEVVRISRSGYPTRMTHQEFARRYGFLLLENIASQDPLSVSVAILQQFNILPEMYQVG 659

Query: 689 YTKLYLRSGQLAALEDRR 706
           YTKL+ R+GQ+ ALED R
Sbjct: 660 YTKLFFRTGQIGALEDTR 677

This catalytic (head) domain has ATPase activity and belongs to the larger group of P-loop NTPases. Myosins are actin-dependent molecular motors that play important roles in muscle contraction, cell motility, and organelle transport. The head domain is a molecular motor, which utilizes ATP hydrolysis to generate directed movement toward the plus end along actin filaments. A cyclical interaction between myosin and actin provides the driving force. Rates of ATP hydrolysis and consequently the speed of movement along actin filaments vary widely, from about 0.04 micrometer per second for myosin I to 4.5 micrometer per second for myosin II in skeletal muscle. Myosin II moves in discrete steps about 5-10 nm long and generates 1-5 piconewtons of force. Upon ATP binding, the myosin head dissociates from an actin filament. ATP hydrolysis causes the head to pivot and associate with a new actin subunit. The release of Pi causes the head to pivot and move the filament (power stroke). Release of ADP completes the cycle. Length = 677
>gnl|CDD|214580 smart00242, MYSc, Myosin Back     alignment and domain information
>gnl|CDD|238071 cd00124, MYSc, Myosin motor domain Back     alignment and domain information
>gnl|CDD|238673 cd01377, MYSc_type_II, Myosin motor domain, type II myosins Back     alignment and domain information
>gnl|CDD|215687 pfam00063, Myosin_head, Myosin head (motor domain) Back     alignment and domain information
>gnl|CDD|238680 cd01384, MYSc_type_XI, Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>gnl|CDD|238676 cd01380, MYSc_type_V, Myosin motor domain, type V myosins Back     alignment and domain information
>gnl|CDD|227355 COG5022, COG5022, Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>gnl|CDD|238674 cd01378, MYSc_type_I, Myosin motor domain, type I myosins Back     alignment and domain information
>gnl|CDD|238677 cd01381, MYSc_type_VII, Myosin motor domain, type VII myosins Back     alignment and domain information
>gnl|CDD|238683 cd01387, MYSc_type_XV, Myosin motor domain, type XV myosins Back     alignment and domain information
>gnl|CDD|238681 cd01385, MYSc_type_IX, Myosin motor domain, type IX myosins Back     alignment and domain information
>gnl|CDD|238678 cd01382, MYSc_type_VI, Myosin motor domain, type VI myosins Back     alignment and domain information
>gnl|CDD|238675 cd01379, MYSc_type_III, Myosin motor domain, type III myosins Back     alignment and domain information
>gnl|CDD|240229 PTZ00014, PTZ00014, myosin-A; Provisional Back     alignment and domain information
>gnl|CDD|238682 cd01386, MYSc_type_XVIII, Myosin motor domain, type XVIII myosins Back     alignment and domain information
>gnl|CDD|238659 cd01363, Motor_domain, Myosin and Kinesin motor domain Back     alignment and domain information
>gnl|CDD|197470 smart00015, IQ, Calmodulin-binding motif Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 1048
COG5022 1463 Myosin heavy chain [Cytoskeleton] 100.0
PTZ00014821 myosin-A; Provisional 100.0
cd01383677 MYSc_type_VIII Myosin motor domain, plant-specific 100.0
cd01381671 MYSc_type_VII Myosin motor domain, type VII myosin 100.0
cd01377693 MYSc_type_II Myosin motor domain, type II myosins. 100.0
cd01380691 MYSc_type_V Myosin motor domain, type V myosins. M 100.0
cd01384674 MYSc_type_XI Myosin motor domain, plant-specific t 100.0
cd01378674 MYSc_type_I Myosin motor domain, type I myosins. M 100.0
cd01387677 MYSc_type_XV Myosin motor domain, type XV myosins. 100.0
cd01385692 MYSc_type_IX Myosin motor domain, type IX myosins. 100.0
KOG01641001 consensus Myosin class I heavy chain [Cytoskeleton 100.0
cd01382717 MYSc_type_VI Myosin motor domain, type VI myosins. 100.0
smart00242677 MYSc Myosin. Large ATPases. ATPase; molecular moto 100.0
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 100.0
cd01379653 MYSc_type_III Myosin motor domain, type III myosin 100.0
cd00124679 MYSc Myosin motor domain. This catalytic (head) do 100.0
KOG01621106 consensus Myosin class I heavy chain [Cytoskeleton 100.0
cd01386767 MYSc_type_XVIII Myosin motor domain, type XVIII my 100.0
KOG0160862 consensus Myosin class V heavy chain [Cytoskeleton 100.0
PF00063689 Myosin_head: Myosin head (motor domain); InterPro: 100.0
KOG0163 1259 consensus Myosin class VI heavy chain [Cytoskeleto 100.0
KOG42291062 consensus Myosin VII, myosin IXB and related myosi 100.0
cd01363186 Motor_domain Myosin and Kinesin motor domain. Thes 98.74
KOG0160862 consensus Myosin class V heavy chain [Cytoskeleton 97.95
KOG0161 1930 consensus Myosin class II heavy chain [Cytoskeleto 97.79
KOG42291062 consensus Myosin VII, myosin IXB and related myosi 97.62
PF0061221 IQ: IQ calmodulin-binding motif; InterPro: IPR0000 96.91
KOG0520975 consensus Uncharacterized conserved protein, conta 96.84
KOG2128 1401 consensus Ras GTPase-activating protein family - I 96.77
PF0061221 IQ: IQ calmodulin-binding motif; InterPro: IPR0000 96.72
KOG0925699 consensus mRNA splicing factor ATP-dependent RNA h 96.48
smart0001526 IQ Short calmodulin-binding motif containing conse 95.16
PF13207121 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6 95.09
smart0001526 IQ Short calmodulin-binding motif containing conse 95.01
PTZ00014821 myosin-A; Provisional 94.94
COG5022 1463 Myosin heavy chain [Cytoskeleton] 94.19
PF13238129 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB 93.81
PF13401131 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S 93.77
PF13191185 AAA_16: AAA ATPase domain; PDB: 2V1U_A. 93.68
KOG0163 1259 consensus Myosin class VI heavy chain [Cytoskeleto 93.66
TIGR03015269 pepcterm_ATPase putative secretion ATPase, PEP-CTE 93.52
TIGR02322179 phosphon_PhnN phosphonate metabolism protein/1,5-b 93.52
cd00009151 AAA The AAA+ (ATPases Associated with a wide varie 93.45
cd0201969 NK Nucleoside/nucleotide kinase (NK) is a protein 93.22
PF00004132 AAA: ATPase family associated with various cellula 92.55
PRK05480209 uridine/cytidine kinase; Provisional 92.48
PRK06696223 uridine kinase; Validated 92.46
cd01131198 PilT Pilus retraction ATPase PilT. PilT is a nucle 92.45
KOG0520975 consensus Uncharacterized conserved protein, conta 92.42
PF01583156 APS_kinase: Adenylylsulphate kinase; InterPro: IPR 92.27
PRK13833323 conjugal transfer protein TrbB; Provisional 92.24
cd00820107 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPC 92.23
cd01918149 HprK_C HprK/P, the bifunctional histidine-containi 92.12
PRK00300205 gmk guanylate kinase; Provisional 92.08
PF00485194 PRK: Phosphoribulokinase / Uridine kinase family; 92.02
PRK05541176 adenylylsulfate kinase; Provisional 92.0
cd01129264 PulE-GspE PulE/GspE The type II secretory pathway 91.99
smart00382148 AAA ATPases associated with a variety of cellular 91.98
TIGR00150133 HI0065_YjeE ATPase, YjeE family. Members of this f 91.96
cd02023198 UMPK Uridine monophosphate kinase (UMPK, EC 2.7.1. 91.89
TIGR00235207 udk uridine kinase. Model contains a number of lon 91.8
COG0444316 DppD ABC-type dipeptide/oligopeptide/nickel transp 91.75
PRK06762166 hypothetical protein; Provisional 91.69
COG0194191 Gmk Guanylate kinase [Nucleotide transport and met 91.64
PRK08233182 hypothetical protein; Provisional 91.62
TIGR02173171 cyt_kin_arch cytidylate kinase, putative. Proteins 91.44
PTZ00301210 uridine kinase; Provisional 91.26
cd02020147 CMPK Cytidine monophosphate kinase (CMPK) catalyze 91.25
PRK06547172 hypothetical protein; Provisional 91.2
PRK00131175 aroK shikimate kinase; Reviewed 91.15
PRK09270229 nucleoside triphosphate hydrolase domain-containin 91.1
cd02028179 UMPK_like Uridine monophosphate kinase_like (UMPK_ 91.03
cd00227175 CPT Chloramphenicol (Cm) phosphotransferase (CPT). 91.0
PF1324576 AAA_19: Part of AAA domain 90.99
PRK07261171 topology modulation protein; Provisional 90.96
cd02025220 PanK Pantothenate kinase (PanK) catalyzes the phos 90.89
PF07724171 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR 90.85
TIGR03420226 DnaA_homol_Hda DnaA regulatory inactivator Hda. Me 90.84
PRK08118167 topology modulation protein; Reviewed 90.7
cd01130186 VirB11-like_ATPase Type IV secretory pathway compo 90.68
COG0572218 Udk Uridine kinase [Nucleotide transport and metab 90.58
PF03668284 ATP_bind_2: P-loop ATPase protein family; InterPro 90.51
PRK08084235 DNA replication initiation factor; Provisional 90.45
KOG2128 1401 consensus Ras GTPase-activating protein family - I 90.33
TIGR01420343 pilT_fam pilus retraction protein PilT. This model 90.21
PF05729166 NACHT: NACHT domain 90.17
PRK10078186 ribose 1,5-bisphosphokinase; Provisional 90.15
PRK00889175 adenylylsulfate kinase; Provisional 90.1
TIGR02782299 TrbB_P P-type conjugative transfer ATPase TrbB. Th 90.1
PF12846304 AAA_10: AAA-like domain 90.1
PRK14737186 gmk guanylate kinase; Provisional 90.05
TIGR01313163 therm_gnt_kin carbohydrate kinase, thermoresistant 89.98
TIGR02928365 orc1/cdc6 family replication initiation protein. M 89.88
cd00071137 GMPK Guanosine monophosphate kinase (GMPK, EC 2.7. 89.85
cd02024187 NRK1 Nicotinamide riboside kinase (NRK) is an enzy 89.82
PF09755310 DUF2046: Uncharacterized conserved protein H4 (DUF 89.72
TIGR02524358 dot_icm_DotB Dot/Icm secretion system ATPase DotB. 89.67
PRK14738206 gmk guanylate kinase; Provisional 89.6
PF00437270 T2SE: Type II/IV secretion system protein; InterPr 89.48
PF00910107 RNA_helicase: RNA helicase; InterPro: IPR000605 He 89.46
PRK03846198 adenylylsulfate kinase; Provisional 89.46
cd02027149 APSK Adenosine 5'-phosphosulfate kinase (APSK) cat 89.44
TIGR00554290 panK_bact pantothenate kinase, bacterial type. Sho 89.42
PRK14961363 DNA polymerase III subunits gamma and tau; Provisi 89.33
TIGR02525372 plasmid_TraJ plasmid transfer ATPase TraJ. Members 89.24
PF03266168 NTPase_1: NTPase; InterPro: IPR004948 This entry r 89.23
PRK06217183 hypothetical protein; Validated 89.22
TIGR03263180 guanyl_kin guanylate kinase. Members of this famil 89.08
PF13671143 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1 89.02
COG1125309 OpuBA ABC-type proline/glycine betaine transport s 89.01
COG1660286 Predicted P-loop-containing kinase [General functi 88.9
PRK12377248 putative replication protein; Provisional 88.69
COG1102179 Cmk Cytidylate kinase [Nucleotide transport and me 88.65
cd01120165 RecA-like_NTPases RecA-like NTPases. This family i 88.57
PRK10751173 molybdopterin-guanine dinucleotide biosynthesis pr 88.54
PRK13851344 type IV secretion system protein VirB11; Provision 88.53
cd00464154 SK Shikimate kinase (SK) is the fifth enzyme in th 88.49
COG0529197 CysC Adenylylsulfate kinase and related kinases [I 88.45
PRK12608380 transcription termination factor Rho; Provisional 88.29
TIGR01360188 aden_kin_iso1 adenylate kinase, isozyme 1 subfamil 87.95
PRK08903227 DnaA regulatory inactivator Hda; Validated 87.91
cd02021150 GntK Gluconate kinase (GntK) catalyzes the phospho 87.86
PRK00411394 cdc6 cell division control protein 6; Reviewed 87.82
PRK13900332 type IV secretion system ATPase VirB11; Provisiona 87.79
PRK14730195 coaE dephospho-CoA kinase; Provisional 87.76
PF03205140 MobB: Molybdopterin guanine dinucleotide synthesis 87.73
PRK14527191 adenylate kinase; Provisional 87.72
PRK04182180 cytidylate kinase; Provisional 87.68
PRK13764602 ATPase; Provisional 87.66
PRK07667193 uridine kinase; Provisional 87.56
TIGR02533486 type_II_gspE general secretory pathway protein E. 87.36
PRK04040188 adenylate kinase; Provisional 87.3
PRK11637 428 AmiB activator; Provisional 87.27
PRK05057172 aroK shikimate kinase I; Reviewed 87.19
COG1579239 Zn-ribbon protein, possibly nucleic acid-binding [ 87.17
COG4608268 AppF ABC-type oligopeptide transport system, ATPas 87.07
PF03193161 DUF258: Protein of unknown function, DUF258; Inter 86.98
COG0563178 Adk Adenylate kinase and related kinases [Nucleoti 86.97
PRK12402337 replication factor C small subunit 2; Reviewed 86.85
PHA00729226 NTP-binding motif containing protein 86.74
PRK06893229 DNA replication initiation factor; Validated 86.73
PRK09825176 idnK D-gluconate kinase; Provisional 86.7
cd02029277 PRK_like Phosphoribulokinase-like (PRK-like) is a 86.63
PRK14732196 coaE dephospho-CoA kinase; Provisional 86.61
PRK14964491 DNA polymerase III subunits gamma and tau; Provisi 86.56
COG3883265 Uncharacterized protein conserved in bacteria [Fun 86.49
PRK08727233 hypothetical protein; Validated 86.47
PF1355562 AAA_29: P-loop containing region of AAA domain 86.46
PRK13894319 conjugal transfer ATPase TrbB; Provisional 86.45
cd03115173 SRP The signal recognition particle (SRP) mediates 86.44
PHA02544316 44 clamp loader, small subunit; Provisional 86.43
PRK11637 428 AmiB activator; Provisional 86.32
PF07475171 Hpr_kinase_C: HPr Serine kinase C-terminal domain; 86.0
TIGR01359183 UMP_CMP_kin_fam UMP-CMP kinase family. This subfam 85.96
PRK05416288 glmZ(sRNA)-inactivating NTPase; Provisional 85.93
COG2805353 PilT Tfp pilus assembly protein, pilus retraction 85.87
PRK06761282 hypothetical protein; Provisional 85.8
PRK14733204 coaE dephospho-CoA kinase; Provisional 85.8
PRK14956484 DNA polymerase III subunits gamma and tau; Provisi 85.77
PF02367123 UPF0079: Uncharacterised P-loop hydrolase UPF0079; 85.56
COG0802149 Predicted ATPase or kinase [General function predi 85.52
COG1124252 DppF ABC-type dipeptide/oligopeptide/nickel transp 85.52
PRK09111598 DNA polymerase III subunits gamma and tau; Validat 85.48
PRK00698205 tmk thymidylate kinase; Validated 85.44
TIGR00176155 mobB molybdopterin-guanine dinucleotide biosynthes 85.42
PRK06645507 DNA polymerase III subunits gamma and tau; Validat 85.38
KOG09241042 consensus mRNA splicing factor ATP-dependent RNA h 85.32
PRK15453290 phosphoribulokinase; Provisional 85.31
COG1618179 Predicted nucleotide kinase [Nucleotide transport 85.29
TIGR03499282 FlhF flagellar biosynthetic protein FlhF. 85.22
PF07728139 AAA_5: AAA domain (dynein-related subfamily); Inte 85.19
PF00625183 Guanylate_kin: Guanylate kinase; InterPro: IPR0081 85.12
PRK14528186 adenylate kinase; Provisional 85.12
PRK08356195 hypothetical protein; Provisional 85.11
PRK08116268 hypothetical protein; Validated 84.95
PRK14531183 adenylate kinase; Provisional 84.94
cd03293220 ABC_NrtD_SsuB_transporters NrtD and SsuB are the A 84.86
TIGR00152188 dephospho-CoA kinase. This model produces scores i 84.83
PRK03839180 putative kinase; Provisional 84.81
PRK00440319 rfc replication factor C small subunit; Reviewed 84.77
COG4172534 ABC-type uncharacterized transport system, duplica 84.72
COG2884223 FtsE Predicted ATPase involved in cell division [C 84.7
PRK10436462 hypothetical protein; Provisional 84.63
PF12325120 TMF_TATA_bd: TATA element modulatory factor 1 TATA 84.62
TIGR01166190 cbiO cobalt transport protein ATP-binding subunit. 84.62
KOG0744423 consensus AAA+-type ATPase [Posttranslational modi 84.6
TIGR02673214 FtsE cell division ATP-binding protein FtsE. This 84.6
TIGR00455184 apsK adenylylsulfate kinase (apsK). Important resi 84.6
COG1123539 ATPase components of various ABC-type transport sy 84.6
COG1123539 ATPase components of various ABC-type transport sy 84.5
TIGR02788308 VirB11 P-type DNA transfer ATPase VirB11. The VirB 84.49
PRK15093330 antimicrobial peptide ABC transporter ATP-binding 84.48
PF00308219 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013 84.4
PRK14974336 cell division protein FtsY; Provisional 84.38
TIGR00960216 3a0501s02 Type II (General) Secretory Pathway (IIS 84.38
KOG0804493 consensus Cytoplasmic Zn-finger protein BRAP2 (BRC 84.38
PRK15177213 Vi polysaccharide export ATP-binding protein VexC; 84.34
TIGR03574249 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal. Mem 84.31
PF00005137 ABC_tran: ABC transporter This structure is on hol 84.3
PRK14957546 DNA polymerase III subunits gamma and tau; Provisi 84.26
cd0198399 Fer4_NifH The Fer4_NifH superfamily contains a var 84.17
PF0600572 DUF904: Protein of unknown function (DUF904); Inte 84.15
PRK11308327 dppF dipeptide transporter ATP-binding subunit; Pr 84.12
TIGR02881261 spore_V_K stage V sporulation protein K. Members o 84.11
PHA02530300 pseT polynucleotide kinase; Provisional 84.1
cd03259213 ABC_Carb_Solutes_like ABC Carbohydrate and Solute 84.02
cd03225211 ABC_cobalt_CbiO_domain1 Domain I of the ABC compon 83.97
PF04665241 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 83.89
cd01672200 TMPK Thymidine monophosphate kinase (TMPK), also k 83.84
PF00158168 Sigma54_activat: Sigma-54 interaction domain; Inte 83.84
PRK13342413 recombination factor protein RarA; Reviewed 83.83
PF10481307 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR0 83.76
cd03116159 MobB Molybdenum is an essential trace element in t 83.69
PRK14962472 DNA polymerase III subunits gamma and tau; Provisi 83.68
COG1493308 HprK Serine kinase of the HPr protein, regulates c 83.65
PRK09473330 oppD oligopeptide transporter ATP-binding componen 83.64
cd03255218 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of 83.59
cd03260227 ABC_PstB_phosphate_transporter Phosphate uptake is 83.57
PRK15079331 oligopeptide ABC transporter ATP-binding protein O 83.49
COG2804500 PulE Type II secretory pathway, ATPase PulE/Tfp pi 83.46
PRK04220301 2-phosphoglycerate kinase; Provisional 83.46
TIGR0244965 conserved hypothetical protein TIGR02449. Members 83.44
PRK13768253 GTPase; Provisional 83.42
COG4619223 ABC-type uncharacterized transport system, ATPase 83.4
PF0273642 Myosin_N: Myosin N-terminal SH3-like domain; Inter 83.4
TIGR00678188 holB DNA polymerase III, delta' subunit. At positi 83.37
TIGR03608206 L_ocin_972_ABC putative bacteriocin export ABC tra 83.32
cd03292214 ABC_FtsE_transporter FtsE is a hydrophilic nucleot 83.31
cd02034116 CooC The accessory protein CooC, which contains a 83.31
PTZ001121164 origin recognition complex 1 protein; Provisional 83.27
cd02022179 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2.7.1.2 83.21
PRK10416318 signal recognition particle-docking protein FtsY; 83.21
cd03296239 ABC_CysA_sulfate_importer Part of the ABC transpor 83.21
cd03229178 ABC_Class3 This class is comprised of all BPD (Bin 83.2
TIGR02880284 cbbX_cfxQ probable Rubsico expression protein CbbX 83.16
COG4172534 ABC-type uncharacterized transport system, duplica 83.16
TIGR02868529 CydC thiol reductant ABC exporter, CydC subunit. T 83.11
smart00072184 GuKc Guanylate kinase homologues. Active enzymes c 83.08
PF13604196 AAA_30: AAA domain; PDB: 1W36_G 3K70_G 3UPU_B 3GPL 83.08
cd03258233 ABC_MetN_methionine_transporter MetN (also known a 83.06
PRK11022326 dppD dipeptide transporter ATP-binding subunit; Pr 83.01
PRK07003830 DNA polymerase III subunits gamma and tau; Validat 83.0
PRK14963504 DNA polymerase III subunits gamma and tau; Provisi 82.95
PRK02496184 adk adenylate kinase; Provisional 82.95
PRK14734200 coaE dephospho-CoA kinase; Provisional 82.89
TIGR00064272 ftsY signal recognition particle-docking protein F 82.86
PRK00023225 cmk cytidylate kinase; Provisional 82.86
PRK00081194 coaE dephospho-CoA kinase; Reviewed 82.8
cd03235213 ABC_Metallic_Cations ABC component of the metal-ty 82.77
PRK06620214 hypothetical protein; Validated 82.76
PF13173128 AAA_14: AAA domain 82.73
PRK09112351 DNA polymerase III subunit delta'; Validated 82.69
PF01695178 IstB_IS21: IstB-like ATP binding protein; InterPro 82.67
cd02026273 PRK Phosphoribulokinase (PRK) is an enzyme involve 82.66
cd03224222 ABC_TM1139_LivF_branched LivF (TM1139) is part of 82.6
PLN03025319 replication factor C subunit; Provisional 82.6
TIGR02902531 spore_lonB ATP-dependent protease LonB. Members of 82.52
PLN02796347 D-glycerate 3-kinase 82.48
TIGR02538564 type_IV_pilB type IV-A pilus assembly ATPase PilB. 82.45
PRK05342412 clpX ATP-dependent protease ATP-binding subunit Cl 82.4
cd03256241 ABC_PhnC_transporter ABC-type phosphate/phosphonat 82.38
PRK03731171 aroL shikimate kinase II; Reviewed 82.37
PRK09087226 hypothetical protein; Validated 82.37
PRK14969527 DNA polymerase III subunits gamma and tau; Provisi 82.31
COG2274709 SunT ABC-type bacteriocin/lantibiotic exporters, c 82.22
PRK10646153 ADP-binding protein; Provisional 82.2
COG2204464 AtoC Response regulator containing CheY-like recei 82.2
TIGR03864236 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, 82.19
COG1428216 Deoxynucleoside kinases [Nucleotide transport and 82.17
PF01637234 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 82.13
TIGR02315243 ABC_phnC phosphonate ABC transporter, ATP-binding 82.07
cd03268208 ABC_BcrA_bacitracin_resist The BcrA subfamily repr 82.05
cd03297214 ABC_ModC_molybdenum_transporter ModC is an ABC-typ 82.0
cd01124187 KaiC KaiC is a circadian clock protein primarily f 81.95
cd03223166 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cass 81.9
cd03265220 ABC_DrrA DrrA is the ATP-binding protein component 81.87
PRK05537568 bifunctional sulfate adenylyltransferase subunit 1 81.86
PRK11124242 artP arginine transporter ATP-binding subunit; Pro 81.83
cd03219236 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC trans 81.8
PRK13947171 shikimate kinase; Provisional 81.78
PRK14530215 adenylate kinase; Provisional 81.77
PRK05439311 pantothenate kinase; Provisional 81.77
cd03269210 ABC_putative_ATPase This subfamily is involved in 81.76
PF13479213 AAA_24: AAA domain 81.74
TIGR01184230 ntrCD nitrate transport ATP-binding subunits C and 81.72
cd03266218 ABC_NatA_sodium_exporter NatA is the ATPase compon 81.71
TIGR02640262 gas_vesic_GvpN gas vesicle protein GvpN. Members o 81.67
PF01580205 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR00 81.66
COG1136226 SalX ABC-type antimicrobial peptide transport syst 81.64
cd03262213 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP- 81.63
PLN02348395 phosphoribulokinase 81.61
cd03226205 ABC_cobalt_CbiO_domain2 Domain II of the ABC compo 81.61
PRK08154309 anaerobic benzoate catabolism transcriptional regu 81.55
PRK13539207 cytochrome c biogenesis protein CcmA; Provisional 81.52
TIGR00017217 cmk cytidylate kinase. This family consists of cyt 81.46
cd03238176 ABC_UvrA The excision repair protein UvrA; Nucleot 81.46
PF06414199 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This e 81.46
PRK05428308 HPr kinase/phosphorylase; Provisional 81.45
cd03230173 ABC_DR_subfamily_A This family of ATP-binding prot 81.37
TIGR03238504 dnd_assoc_3 dnd system-associated protein 3. cereu 81.34
PRK13695174 putative NTPase; Provisional 81.33
PRK11176582 lipid transporter ATP-binding/permease protein; Pr 81.31
TIGR00972247 3a0107s01c2 phosphate ABC transporter, ATP-binding 81.29
PRK10908222 cell division protein FtsE; Provisional 81.24
cd03245220 ABCC_bacteriocin_exporters ABC-type bacteriocin ex 81.18
PRK13729 475 conjugal transfer pilus assembly protein TraB; Pro 81.15
TIGR01978243 sufC FeS assembly ATPase SufC. SufC is part of the 81.09
TIGR03410230 urea_trans_UrtE urea ABC transporter, ATP-binding 81.06
PF00448196 SRP54: SRP54-type protein, GTPase domain; InterPro 80.98
TIGR00041195 DTMP_kinase thymidylate kinase. Function: phosphor 80.92
PRK10584228 putative ABC transporter ATP-binding protein YbbA; 80.92
PRK04195482 replication factor C large subunit; Provisional 80.85
TIGR02211221 LolD_lipo_ex lipoprotein releasing system, ATP-bin 80.82
cd03294269 ABC_Pro_Gly_Bertaine This family comprises the gly 80.73
PLN02318656 phosphoribulokinase/uridine kinase 80.73
PRK09435332 membrane ATPase/protein kinase; Provisional 80.73
cd03218232 ABC_YhbG The ABC transporters belonging to the Yhb 80.72
PRK14950585 DNA polymerase III subunits gamma and tau; Provisi 80.71
PF10168717 Nup88: Nuclear pore component; InterPro: IPR019321 80.7
PRK14959624 DNA polymerase III subunits gamma and tau; Provisi 80.67
PRK11248255 tauB taurine transporter ATP-binding subunit; Prov 80.67
TIGR02903615 spore_lon_C ATP-dependent protease, Lon family. Me 80.64
PF12774231 AAA_6: Hydrolytic ATP binding site of dynein motor 80.64
PRK11629233 lolD lipoprotein transporter ATP-binding subunit; 80.63
cd03270226 ABC_UvrA_I The excision repair protein UvrA domain 80.61
cd03301213 ABC_MalK_N The N-terminal ATPase domain of the mal 80.58
COG0237201 CoaE Dephospho-CoA kinase [Coenzyme metabolism] 80.55
TIGR02858270 spore_III_AA stage III sporulation protein AA. Mem 80.54
PF14532138 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 80.49
TIGR02770230 nickel_nikD nickel import ATP-binding protein NikD 80.44
PRK14242253 phosphate transporter ATP-binding protein; Provisi 80.44
PRK13541195 cytochrome c biogenesis protein CcmA; Provisional 80.35
PRK01184184 hypothetical protein; Provisional 80.32
cd03237246 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 o 80.32
PRK13946184 shikimate kinase; Provisional 80.31
PF12718143 Tropomyosin_1: Tropomyosin like; InterPro: IPR0005 80.29
PRK06526254 transposase; Provisional 80.29
cd03222177 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibi 80.22
COG1126240 GlnQ ABC-type polar amino acid transport system, A 80.2
TIGR03752 472 conj_TIGR03752 integrating conjugative element pro 80.1
PRK00625173 shikimate kinase; Provisional 80.09
PRK13645289 cbiO cobalt transporter ATP-binding subunit; Provi 80.06
cd03234226 ABCG_White The White subfamily represents ABC tran 80.01
>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information 
Probab=100.00  E-value=1.7e-204  Score=1841.38  Aligned_cols=768  Identities=45%  Similarity=0.742  Sum_probs=698.7

Q ss_pred             CCcEEEEeCCCCc--CCCCCccCCccccccCCCCCchhHHHHHHHHhhcCccccccCCceEecCCCCCCCCCCHHHHHHH
Q 001592           16 NGNVVKVSTGELL--PANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAY   93 (1048)
Q Consensus        16 ~g~~~~v~~~~~~--~~np~~~~~~~Dl~~L~~l~e~~il~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~ly~~~~~~~y   93 (1048)
                      +|....|+...+.  ..+||.++++|||+.|++||||+|||||++||.+++||||.|-||||||||+++|||++++++.|
T Consensus        44 ~~~~~~v~~~~~~~~~~~~P~~~~vdDLt~LSyLNEpsVl~nL~kRY~n~~IYTYSGlvLIAvNPy~~L~iYt~d~i~~Y  123 (1463)
T COG5022          44 DGESVSVKKKVLGNDRIKLPKFDGVDDLTELSYLNEPAVLHNLEKRYNNGQIYTYSGLVLIAVNPYRDLGIYTDDIIQSY  123 (1463)
T ss_pred             cCcccceeehhcccccccCccccCchhhhhhhccCcHHHHHHHHHHhhcCceeEEeeeEEEEecCcccCCCccHHHHHHh
Confidence            5666666665543  34577999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhcCCC--CCchhHHHHHHHHHhhhCCCceEEEEcCCCCCChhhHHHHHHHHHHHccCCCc----hHHHHHHhhhHHHHH
Q 001592           94 RQKVMD--SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGSE----GIEYEILQTNHILEA  167 (1048)
Q Consensus        94 ~~~~~~--~PHiyaiA~~Ay~~m~~~~~~QsIiisGESGaGKTet~k~il~yL~~~~~~~~----~i~~~il~sn~iLEA  167 (1048)
                      .++...  +|||||||+.||+.|...++||||||||||||||||+||.||+|||+++++++    .|+++|+++||||||
T Consensus       124 ~~K~r~el~PHvfAIAe~aY~~lls~~eNQtIiISGESGAGKTe~aK~ImqYlasv~~s~~~~~~~iE~~ILaTNPILEA  203 (1463)
T COG5022         124 SGKNRLELEPHVFAIAEEAYRNLLSEKENQTIIISGESGAGKTENAKRIMQYLASVTSSSTVEISSIEKQILATNPILEA  203 (1463)
T ss_pred             ccCccccCCchHHHHHHHHHHHHHhcCCCceEEEecCCCCCchHHHHHHHHHHHHhccCCcchHHHHHHHHHhcchHHHH
Confidence            988765  79999999999999999999999999999999999999999999999988765    899999999999999


Q ss_pred             hhcCcCCCCCCCCcccceEEEEECCCCceeeeEeeeeecCccccccccCCCccchhHHHHhhCCChhhHHhcCCCCCCCC
Q 001592          168 FGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKVANDY  247 (1048)
Q Consensus       168 FGNAkT~~N~NSSRfGk~i~l~f~~~g~i~Ga~i~~yLLEksRVv~~~~gErnfHIFYqLl~G~~~~~~~~l~L~~~~~y  247 (1048)
                      ||||||+||||||||||||+|.||.+|.|+||+|++|||||||||+|+.+|||||||||||+|+++..++.+++..|.+|
T Consensus       204 FGNAkTvRNdNSSRFGKyikI~Fd~~g~I~GA~I~~YLLEKSRVV~Q~~~ERNYHIFYQll~G~~~~~k~~~~~~~~~dY  283 (1463)
T COG5022         204 FGNAKTVRNDNSSRFGKYIKIEFDENGEICGAKIETYLLEKSRVVHQNKNERNYHIFYQLLAGDPEELKKLLLLQNPKDY  283 (1463)
T ss_pred             hccccccccCCcccccceEEEEECCCCceechhhhhhhhhhhhhccCCCCccchhhhhhHhcCChHHHHHHhhccChHhh
Confidence            99999999999999999999999999999999999999999999999999999999999999988888888888999999


Q ss_pred             ccccCCCCcccCCcchHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHhcCceeeeeCCCceeeecChHHHHHHHHhcC
Q 001592          248 NYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMG  327 (1048)
Q Consensus       248 ~yL~~~~~~~~~~~dD~~~f~~l~~al~~lg~~~~~~~~i~~ilaaILhLGni~F~~~~~~~~~~~~~~~~l~~~a~LLg  327 (1048)
                      .||++++|..++|+||+++|+.|++||++|||+.++|.+||+|||||||||||+|..+ .++.+.+.+.+.++.+|.|||
T Consensus       284 ~Yl~~~~~~~I~gIdD~kefk~t~~AlktiGi~~eeq~~IF~iLAaILhiGNIef~~~-r~g~a~~~~~~~~~~~c~LLg  362 (1463)
T COG5022         284 IYLSQGGCDKIDGIDDAKEFKITLDALKTIGIDEEEQDQIFKILAAILHIGNIEFKED-RNGAAIFSDNSVLDKACYLLG  362 (1463)
T ss_pred             HhHhhcCCCcCCCcccHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHhhcceeeeec-ccchhhcCCchHHHHHHHHhC
Confidence            9999999999999999999999999999999999999999999999999999999853 445667889999999999999


Q ss_pred             CCHHHHHHhHhcceeccCCceeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccCCccCcceeEEecccCCccC
Q 001592          328 CSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESF  407 (1048)
Q Consensus       328 v~~~~L~~~Lt~~~~~~~~e~i~~~l~~~~A~~~rdalak~LY~~LF~wlV~~iN~~l~~~~~~~~~~IgILDi~GFE~f  407 (1048)
                      ||+..|.++|+.|.|++++|.|.+++|..||..+||||||+||++||+|||.+||.+|..+.. ...|||||||||||+|
T Consensus       363 Id~~~f~k~lvk~~ikt~~E~i~~~~n~~QA~~irdslAK~lY~~lFdwiV~rIN~sL~~~~~-~~~fIGVLDIyGFEiF  441 (1463)
T COG5022         363 IDPSLFVKWLVKRQIKTGGEWIVVPLNLEQALAIRDSLAKALYSNLFDWIVDRINKSLDHSAA-ASNFIGVLDIYGFEIF  441 (1463)
T ss_pred             CCHHHHHHHHHHhHhhcCceEEEecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCccc-cccceeEEeecchhhh
Confidence            999999999999999999999999999999999999999999999999999999999997654 5689999999999999


Q ss_pred             CCCChHHHHHHHhhHHHHHHHHHhhhhHhHhhhhhcCCceecccccChHHHHHHHhc-CCCccccccccccCCCCCChHH
Q 001592          408 KKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEK-KPLGVLSLLDEESNFPKATDLT  486 (1048)
Q Consensus       408 ~~NsfEQlcINyaNE~Lq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~l~li~~-~p~Gil~lLdee~~~p~~td~~  486 (1048)
                      +.|||||||||||||||||+||+|||++||++|.+|||+|++|+|.||++|+||||+ .|.|||++|||||.+|.|||++
T Consensus       442 EkNSFEQlCINYtNEKLQQ~Fn~h~FklEQEeY~kE~IeW~~Idy~DnQ~~IDLIE~~~p~GIlslLDEE~~~p~atd~s  521 (1463)
T COG5022         442 EKNSFEQLCINYTNEKLQQFFNQHMFKLEQEEYVKEGIEWSFIDYFDNQPCIDLIEKKNPLGILSLLDEECVMPHATDES  521 (1463)
T ss_pred             ccCcHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCcccccccccCcchhHHHhccCCCchHhhhcHHhcCCCCCchH
Confidence            999999999999999999999999999999999999999999999999999999997 4789999999999999999999


Q ss_pred             HHHHHHHHhC--CCCccccCC--CCceEEEeccCcccccccchhhhccCcchHHHHHHHhhccHHHH-HHhhcccCCCCC
Q 001592          487 FANKLKQHLG--SNSCFKGER--GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVL-QLFASKMLKPSP  561 (1048)
Q Consensus       487 f~~kl~~~~~--~~~~f~~~~--~~~F~I~HyaG~V~Y~~~gflekNrD~l~~~~~~ll~~s~~~l~-~lf~~~~~~~~~  561 (1048)
                      |..||.+.+.  +++.|.+++  ...|+|.||||+|+|+|+||++||+|+++.++++||..|+++++ .+|.......+ 
T Consensus       522 ~~sKL~~~l~~~~~~~f~~~rf~~~~FvvkHYAgDVeY~veg~ldKNkD~l~~~ll~Ll~~StNe~vs~Lf~~~~~~~~-  600 (1463)
T COG5022         522 FTSKLAQRLNKNSNPKFKKSRFRDNKFVVKHYAGDVEYDVEGFLDKNKDPLNDDLLELLKASTNEFVSTLFDDEENIES-  600 (1463)
T ss_pred             HHHHHHHHhccccCccccccccCCCceEEEeecccceeeccchhhhCcchhhHHHHHHHhhccchHHHHhhhhhhhccc-
Confidence            9999999876  567788765  56899999999999999999999999999999999999999875 68873321111 


Q ss_pred             CCCCCCCCCCCccCcccHHHHHHHHHHHHHHHHhccCCeeEEeecCCCCCCCCCcchhhhhhhhcccChhHHHHHhhcCC
Q 001592          562 KPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGY  641 (1048)
Q Consensus       562 ~~~~~~~~~~~~~~~~tv~~~f~~~L~~L~~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gvle~vri~r~Gy  641 (1048)
                                 .+.++|+++.|+.||++||.+|++|+||||||||||..+.|+.||..+|++|||||||||+|||+|+||
T Consensus       601 -----------K~~~pT~gs~~K~sl~~Lm~tl~sTqphyIRCIkPN~~K~p~~fD~~mVL~QLr~~GVlE~IRIsraGF  669 (1463)
T COG5022         601 -----------KGRFPTLGSRFKESLNSLMSTLNSTQPHYIRCIKPNEEKSPWTFDNQMVLSQLRCCGVLETIRISRAGF  669 (1463)
T ss_pred             -----------cCCCCcHHHHHHHHHHHHHHHHHhcCCceeEeeCCCcccCccccchHHHHHHHHhcchhhheeeccccC
Confidence                       235799999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccchhhHHHhhhcccccccc------CCChHHHHHHHHHhcCCCccccccCceeeeeeccchhhhhhhhhhhHH-HHH
Q 001592          642 PTRMRHQEFAGRYGVLLSEKQL------SQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AII  714 (1048)
Q Consensus       642 p~r~~~~~F~~RY~~L~~~~~~------~~d~~~~~~~iL~~~~~~~~~~qvGkTKVFlr~~~~~~LE~~r~~~~~-aai  714 (1048)
                      |.|++|++|+.||++|.|...-      ..|.+.+|..||....+|...||+|+|||||+.++++.||.+|...+. .++
T Consensus       670 P~R~~f~EFv~RY~IL~p~~~~~~~~~~~~~~~~~~~~IL~~~~id~~~YqiG~TKvFfKagvL~~LE~~Rd~~~~~~~~  749 (1463)
T COG5022         670 PSRWTFDEFVQRYRILSPSKSWTGEYTWKEDTKNAVKSILEELVIDSSKYQIGNTKVFFKAGVLAALEDMRDAKLDNIAT  749 (1463)
T ss_pred             chhhhHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHhhcCChhheeccceeEEeeCchHHHHHHHHHHHHHHHHH
Confidence            9999999999999999986432      135788999999999999999999999999999999999999998886 678


Q ss_pred             HHHHhhhccchhhhhhhhhhHHHHHHHHHHHHHHHHHHHhhhhh-hHhHhhHHH--------------------------
Q 001592          715 RLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKS-CSAVVPEIR--------------------------  767 (1048)
Q Consensus       715 ~IQ~~~Rg~~aRr~y~~~r~aai~IQs~~Rg~~aRr~~~~~r~~-aa~~iQ~~~--------------------------  767 (1048)
                      .||+.|||+..|++|......+..+|...+|+..|+.+..-..- ++..+|..|                          
T Consensus       750 ~iq~aiR~~~~rrr~~~~~k~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~r~~~~~~~~~i~~lq~~i~~~  829 (1463)
T COG5022         750 RIQRAIRGRYLRRRYLQALKRIKKIQVIQHGFRLRRLVDYELKWRLFIKLQPLLSLLGSRKEYRSYLACIIKLQKTIKRE  829 (1463)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhhhcccchHHHhHHHhhHHhHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999998887777777776666666544322211 344444433                          


Q ss_pred             ---------HHHhhhhhhhhhhhhhHHHHHHhh-hhhhhh
Q 001592          768 ---------DEQLREIICLQSAIRGWLVRKQLK-MHKLKQ  797 (1048)
Q Consensus       768 ---------~~~~~aai~IQs~~Rg~laRr~~~-l~~~~~  797 (1048)
                               ....++.+.+|+.||...+++.+. +.+...
T Consensus       830 ~~~~~~~e~~~~~~~~~L~~~~~rs~~~~kr~~~L~k~~i  869 (1463)
T COG5022         830 KKLRETEEVEFSLKAEVLIQKFGRSLKAKKRFSLLKKETI  869 (1463)
T ss_pred             HHHhHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHhhhHHH
Confidence                     124557788888888888888888 554443

>PTZ00014 myosin-A; Provisional Back     alignment and domain information
>cd01383 MYSc_type_VIII Myosin motor domain, plant-specific type VIII myosins, a subgroup which has been associated with endocytosis, cytokinesis, cell-to-cell coupling and gating at plasmodesmata Back     alignment and domain information
>cd01381 MYSc_type_VII Myosin motor domain, type VII myosins Back     alignment and domain information
>cd01377 MYSc_type_II Myosin motor domain, type II myosins Back     alignment and domain information
>cd01380 MYSc_type_V Myosin motor domain, type V myosins Back     alignment and domain information
>cd01384 MYSc_type_XI Myosin motor domain, plant-specific type XI myosin, involved in organelle transport Back     alignment and domain information
>cd01378 MYSc_type_I Myosin motor domain, type I myosins Back     alignment and domain information
>cd01387 MYSc_type_XV Myosin motor domain, type XV myosins Back     alignment and domain information
>cd01385 MYSc_type_IX Myosin motor domain, type IX myosins Back     alignment and domain information
>KOG0164 consensus Myosin class I heavy chain [Cytoskeleton] Back     alignment and domain information
>cd01382 MYSc_type_VI Myosin motor domain, type VI myosins Back     alignment and domain information
>smart00242 MYSc Myosin Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>cd01379 MYSc_type_III Myosin motor domain, type III myosins Back     alignment and domain information
>cd00124 MYSc Myosin motor domain Back     alignment and domain information
>KOG0162 consensus Myosin class I heavy chain [Cytoskeleton] Back     alignment and domain information
>cd01386 MYSc_type_XVIII Myosin motor domain, type XVIII myosins Back     alignment and domain information
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] Back     alignment and domain information
>PF00063 Myosin_head: Myosin head (motor domain); InterPro: IPR001609 Muscle contraction is caused by sliding between the thick and thin filaments of the myofibril Back     alignment and domain information
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] Back     alignment and domain information
>cd01363 Motor_domain Myosin and Kinesin motor domain Back     alignment and domain information
>KOG0160 consensus Myosin class V heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG0161 consensus Myosin class II heavy chain [Cytoskeleton] Back     alignment and domain information
>KOG4229 consensus Myosin VII, myosin IXB and related myosins [Cell motility] Back     alignment and domain information
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] Back     alignment and domain information
>PF00612 IQ: IQ calmodulin-binding motif; InterPro: IPR000048 The IQ motif is an extremely basic unit of about 23 amino acids, whose conserved core usually fits the consensus A-x(3)-I-Q-x(2)-F-R-x(4)-K-K Back     alignment and domain information
>KOG0925 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] Back     alignment and domain information
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues Back     alignment and domain information
>PF13207 AAA_17: AAA domain; PDB: 3AKC_A 3AKE_A 3AKD_A 2QL6_G 2QT1_A 2QSZ_A 2QSY_A 2QT0_A 2QG6_A 2P0E_A Back     alignment and domain information
>smart00015 IQ Short calmodulin-binding motif containing conserved Ile and Gln residues Back     alignment and domain information
>PTZ00014 myosin-A; Provisional Back     alignment and domain information
>COG5022 Myosin heavy chain [Cytoskeleton] Back     alignment and domain information
>PF13238 AAA_18: AAA domain; PDB: 3IIK_A 3IIJ_A 3IIL_A 1RKB_A 3IIM_A 2AXP_A 3KB2_A 1KHT_A 1NKS_A 3H86_C Back     alignment and domain information
>PF13401 AAA_22: AAA domain; PDB: 2QBY_B 1FNN_B 1W5T_A 1W5S_B Back     alignment and domain information
>PF13191 AAA_16: AAA ATPase domain; PDB: 2V1U_A Back     alignment and domain information
>KOG0163 consensus Myosin class VI heavy chain [Cytoskeleton] Back     alignment and domain information
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily Back     alignment and domain information
>TIGR02322 phosphon_PhnN phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN Back     alignment and domain information
>cd00009 AAA The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an ancient group of ATPases belonging to the ASCE (for additional strand, catalytic E) division of the P-loop NTPase fold Back     alignment and domain information
>cd02019 NK Nucleoside/nucleotide kinase (NK) is a protein superfamily consisting of multiple families of enzymes that share structural similarity and are functionally related to the catalysis of the reversible phosphate group transfer from nucleoside triphosphates to nucleosides/nucleotides, nucleoside monophosphates, or sugars Back     alignment and domain information
>PF00004 AAA: ATPase family associated with various cellular activities (AAA); InterPro: IPR003959 AAA ATPases (ATPases Associated with diverse cellular Activities) form a large protein family and play a number of roles in the cell including cell-cycle regulation, protein proteolysis and disaggregation, organelle biogenesis and intracellular transport Back     alignment and domain information
>PRK05480 uridine/cytidine kinase; Provisional Back     alignment and domain information
>PRK06696 uridine kinase; Validated Back     alignment and domain information
>cd01131 PilT Pilus retraction ATPase PilT Back     alignment and domain information
>KOG0520 consensus Uncharacterized conserved protein, contains IPT/TIG domain [Function unknown] Back     alignment and domain information
>PF01583 APS_kinase: Adenylylsulphate kinase; InterPro: IPR002891 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases Back     alignment and domain information
>PRK13833 conjugal transfer protein TrbB; Provisional Back     alignment and domain information
>cd00820 PEPCK_HprK Phosphoenolpyruvate carboxykinase (PEPCK), a critical gluconeogenic enzyme, catalyzes the first committed step in the diversion of tricarboxylic acid cycle intermediates toward gluconeogenesis Back     alignment and domain information
>cd01918 HprK_C HprK/P, the bifunctional histidine-containing protein kinase/phosphatase, controls the phosphorylation state of the phosphocarrier protein HPr and regulates the utilization of carbon sources by gram-positive bacteria Back     alignment and domain information
>PRK00300 gmk guanylate kinase; Provisional Back     alignment and domain information
>PF00485 PRK: Phosphoribulokinase / Uridine kinase family; InterPro: IPR006083 Phosphoribulokinase (PRK) 2 Back     alignment and domain information
>PRK05541 adenylylsulfate kinase; Provisional Back     alignment and domain information
>cd01129 PulE-GspE PulE/GspE The type II secretory pathway is the main terminal branch of the general secretory pathway (GSP) Back     alignment and domain information
>smart00382 AAA ATPases associated with a variety of cellular activities Back     alignment and domain information
>TIGR00150 HI0065_YjeE ATPase, YjeE family Back     alignment and domain information
>cd02023 UMPK Uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>TIGR00235 udk uridine kinase Back     alignment and domain information
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK06762 hypothetical protein; Provisional Back     alignment and domain information
>COG0194 Gmk Guanylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK08233 hypothetical protein; Provisional Back     alignment and domain information
>TIGR02173 cyt_kin_arch cytidylate kinase, putative Back     alignment and domain information
>PTZ00301 uridine kinase; Provisional Back     alignment and domain information
>cd02020 CMPK Cytidine monophosphate kinase (CMPK) catalyzes the reversible phosphorylation of cytidine monophosphate (CMP) to produce cytidine diphosphate (CDP), using ATP as the preferred phosphoryl donor Back     alignment and domain information
>PRK06547 hypothetical protein; Provisional Back     alignment and domain information
>PRK00131 aroK shikimate kinase; Reviewed Back     alignment and domain information
>PRK09270 nucleoside triphosphate hydrolase domain-containing protein; Reviewed Back     alignment and domain information
>cd02028 UMPK_like Uridine monophosphate kinase_like (UMPK_like) is a family of proteins highly similar to the uridine monophosphate kinase (UMPK, EC 2 Back     alignment and domain information
>cd00227 CPT Chloramphenicol (Cm) phosphotransferase (CPT) Back     alignment and domain information
>PF13245 AAA_19: Part of AAA domain Back     alignment and domain information
>PRK07261 topology modulation protein; Provisional Back     alignment and domain information
>cd02025 PanK Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4'-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway Back     alignment and domain information
>PF07724 AAA_2: AAA domain (Cdc48 subfamily); InterPro: IPR013093 ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>TIGR03420 DnaA_homol_Hda DnaA regulatory inactivator Hda Back     alignment and domain information
>PRK08118 topology modulation protein; Reviewed Back     alignment and domain information
>cd01130 VirB11-like_ATPase Type IV secretory pathway component VirB11, and related ATPases Back     alignment and domain information
>COG0572 Udk Uridine kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>PF03668 ATP_bind_2: P-loop ATPase protein family; InterPro: IPR005337 This entry represents UPF0042 nucleotide-binding proteins Back     alignment and domain information
>PRK08084 DNA replication initiation factor; Provisional Back     alignment and domain information
>KOG2128 consensus Ras GTPase-activating protein family - IQGAP [Signal transduction mechanisms] Back     alignment and domain information
>TIGR01420 pilT_fam pilus retraction protein PilT Back     alignment and domain information
>PF05729 NACHT: NACHT domain Back     alignment and domain information
>PRK10078 ribose 1,5-bisphosphokinase; Provisional Back     alignment and domain information
>PRK00889 adenylylsulfate kinase; Provisional Back     alignment and domain information
>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB Back     alignment and domain information
>PF12846 AAA_10: AAA-like domain Back     alignment and domain information
>PRK14737 gmk guanylate kinase; Provisional Back     alignment and domain information
>TIGR01313 therm_gnt_kin carbohydrate kinase, thermoresistant glucokinase family Back     alignment and domain information
>TIGR02928 orc1/cdc6 family replication initiation protein Back     alignment and domain information
>cd00071 GMPK Guanosine monophosphate kinase (GMPK, EC 2 Back     alignment and domain information
>cd02024 NRK1 Nicotinamide riboside kinase (NRK) is an enzyme involved in the metabolism of nicotinamide adenine dinucleotide (NAD+) Back     alignment and domain information
>PF09755 DUF2046: Uncharacterized conserved protein H4 (DUF2046); InterPro: IPR019152 This is the conserved N-terminal 350 residues of a family of proteins of unknown function possibly containing a coiled-coil domain Back     alignment and domain information
>TIGR02524 dot_icm_DotB Dot/Icm secretion system ATPase DotB Back     alignment and domain information
>PRK14738 gmk guanylate kinase; Provisional Back     alignment and domain information
>PF00437 T2SE: Type II/IV secretion system protein; InterPro: IPR001482 A number of bacterial proteins, some of which are involved in a general secretion pathway (GSP) for the export of proteins (also called the type II pathway) belong to this group [, ] Back     alignment and domain information
>PF00910 RNA_helicase: RNA helicase; InterPro: IPR000605 Helicases have been classified in 5 superfamilies (SF1-SF5) Back     alignment and domain information
>PRK03846 adenylylsulfate kinase; Provisional Back     alignment and domain information
>cd02027 APSK Adenosine 5'-phosphosulfate kinase (APSK) catalyzes the phosphorylation of adenosine 5'-phosphosulfate to form 3'-phosphoadenosine 5'-phosphosulfate (PAPS) Back     alignment and domain information
>TIGR00554 panK_bact pantothenate kinase, bacterial type Back     alignment and domain information
>PRK14961 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>TIGR02525 plasmid_TraJ plasmid transfer ATPase TraJ Back     alignment and domain information
>PF03266 NTPase_1: NTPase; InterPro: IPR004948 This entry represents a family of nucleoside-triphosphatases which have activity towards ATP, GTP, CTP, TTP and UTP and may hydrolyse nucleoside diphosphates with lower efficiency [] Back     alignment and domain information
>PRK06217 hypothetical protein; Validated Back     alignment and domain information
>TIGR03263 guanyl_kin guanylate kinase Back     alignment and domain information
>PF13671 AAA_33: AAA domain; PDB: 1LTQ_A 2IA5_K 1RC8_A 1LY1_A 1RRC_A 1RPZ_A 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B Back     alignment and domain information
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism] Back     alignment and domain information
>COG1660 Predicted P-loop-containing kinase [General function prediction only] Back     alignment and domain information
>PRK12377 putative replication protein; Provisional Back     alignment and domain information
>COG1102 Cmk Cytidylate kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>cd01120 RecA-like_NTPases RecA-like NTPases Back     alignment and domain information
>PRK10751 molybdopterin-guanine dinucleotide biosynthesis protein B; Provisional Back     alignment and domain information
>PRK13851 type IV secretion system protein VirB11; Provisional Back     alignment and domain information
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants Back     alignment and domain information
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK12608 transcription termination factor Rho; Provisional Back     alignment and domain information
>TIGR01360 aden_kin_iso1 adenylate kinase, isozyme 1 subfamily Back     alignment and domain information
>PRK08903 DnaA regulatory inactivator Hda; Validated Back     alignment and domain information
>cd02021 GntK Gluconate kinase (GntK) catalyzes the phosphoryl transfer from ATP to gluconate Back     alignment and domain information
>PRK00411 cdc6 cell division control protein 6; Reviewed Back     alignment and domain information
>PRK13900 type IV secretion system ATPase VirB11; Provisional Back     alignment and domain information
>PRK14730 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PF03205 MobB: Molybdopterin guanine dinucleotide synthesis protein B; PDB: 2F1R_B 1P9N_A 1NP6_B 2NPI_A 1XJC_A Back     alignment and domain information
>PRK14527 adenylate kinase; Provisional Back     alignment and domain information
>PRK04182 cytidylate kinase; Provisional Back     alignment and domain information
>PRK13764 ATPase; Provisional Back     alignment and domain information
>PRK07667 uridine kinase; Provisional Back     alignment and domain information
>TIGR02533 type_II_gspE general secretory pathway protein E Back     alignment and domain information
>PRK04040 adenylate kinase; Provisional Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PRK05057 aroK shikimate kinase I; Reviewed Back     alignment and domain information
>COG1579 Zn-ribbon protein, possibly nucleic acid-binding [General function prediction only] Back     alignment and domain information
>COG4608 AppF ABC-type oligopeptide transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>PF03193 DUF258: Protein of unknown function, DUF258; InterPro: IPR004881 This entry contains Escherichia coli (strain K12) RsgA, which may play a role in 30S ribosomal subunit biogenesis Back     alignment and domain information
>COG0563 Adk Adenylate kinase and related kinases [Nucleotide transport and metabolism] Back     alignment and domain information
>PRK12402 replication factor C small subunit 2; Reviewed Back     alignment and domain information
>PHA00729 NTP-binding motif containing protein Back     alignment and domain information
>PRK06893 DNA replication initiation factor; Validated Back     alignment and domain information
>PRK09825 idnK D-gluconate kinase; Provisional Back     alignment and domain information
>cd02029 PRK_like Phosphoribulokinase-like (PRK-like) is a family of proteins similar to phosphoribulokinase (PRK), the enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>PRK14732 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PRK14964 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG3883 Uncharacterized protein conserved in bacteria [Function unknown] Back     alignment and domain information
>PRK08727 hypothetical protein; Validated Back     alignment and domain information
>PF13555 AAA_29: P-loop containing region of AAA domain Back     alignment and domain information
>PRK13894 conjugal transfer ATPase TrbB; Provisional Back     alignment and domain information
>cd03115 SRP The signal recognition particle (SRP) mediates the transport to or across the plasma membrane in bacteria and the endoplasmic reticulum in eukaryotes Back     alignment and domain information
>PHA02544 44 clamp loader, small subunit; Provisional Back     alignment and domain information
>PRK11637 AmiB activator; Provisional Back     alignment and domain information
>PF07475 Hpr_kinase_C: HPr Serine kinase C-terminal domain; InterPro: IPR011104 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions [] Back     alignment and domain information
>TIGR01359 UMP_CMP_kin_fam UMP-CMP kinase family Back     alignment and domain information
>PRK05416 glmZ(sRNA)-inactivating NTPase; Provisional Back     alignment and domain information
>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK06761 hypothetical protein; Provisional Back     alignment and domain information
>PRK14733 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>PRK14956 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PF02367 UPF0079: Uncharacterised P-loop hydrolase UPF0079; InterPro: IPR003442 This group consists of bacterial proteins, which contain a P-loop Back     alignment and domain information
>COG0802 Predicted ATPase or kinase [General function prediction only] Back     alignment and domain information
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism] Back     alignment and domain information
>PRK09111 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK00698 tmk thymidylate kinase; Validated Back     alignment and domain information
>TIGR00176 mobB molybdopterin-guanine dinucleotide biosynthesis protein MobB Back     alignment and domain information
>PRK06645 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>KOG0924 consensus mRNA splicing factor ATP-dependent RNA helicase [RNA processing and modification] Back     alignment and domain information
>PRK15453 phosphoribulokinase; Provisional Back     alignment and domain information
>COG1618 Predicted nucleotide kinase [Nucleotide transport and metabolism] Back     alignment and domain information
>TIGR03499 FlhF flagellar biosynthetic protein FlhF Back     alignment and domain information
>PF07728 AAA_5: AAA domain (dynein-related subfamily); InterPro: IPR011704 The ATPases Associated to a variety of cellular Activities (AAA) are a family distinguished by a highly conserved module of 230 amino acids [] Back     alignment and domain information
>PF00625 Guanylate_kin: Guanylate kinase; InterPro: IPR008144 Guanylate kinase (2 Back     alignment and domain information
>PRK14528 adenylate kinase; Provisional Back     alignment and domain information
>PRK08356 hypothetical protein; Provisional Back     alignment and domain information
>PRK08116 hypothetical protein; Validated Back     alignment and domain information
>PRK14531 adenylate kinase; Provisional Back     alignment and domain information
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively Back     alignment and domain information
>TIGR00152 dephospho-CoA kinase Back     alignment and domain information
>PRK03839 putative kinase; Provisional Back     alignment and domain information
>PRK00440 rfc replication factor C small subunit; Reviewed Back     alignment and domain information
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] Back     alignment and domain information
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning] Back     alignment and domain information
>PRK10436 hypothetical protein; Provisional Back     alignment and domain information
>PF12325 TMF_TATA_bd: TATA element modulatory factor 1 TATA binding; InterPro: IPR022091 This is the C-terminal conserved coiled coil region of a family of TATA element modulatory factor 1 proteins conserved in eukaryotes [] Back     alignment and domain information
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit Back     alignment and domain information
>KOG0744 consensus AAA+-type ATPase [Posttranslational modification, protein turnover, chaperones] Back     alignment and domain information
>TIGR02673 FtsE cell division ATP-binding protein FtsE Back     alignment and domain information
>TIGR00455 apsK adenylylsulfate kinase (apsK) Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only] Back     alignment and domain information
>TIGR02788 VirB11 P-type DNA transfer ATPase VirB11 Back     alignment and domain information
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional Back     alignment and domain information
>PF00308 Bac_DnaA: Bacterial dnaA protein; InterPro: IPR013317 This entry represents the central domain of bacterial DnaA proteins [, , ] that play an important role in initiating and regulating chromosomal replication Back     alignment and domain information
>PRK14974 cell division protein FtsY; Provisional Back     alignment and domain information
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein Back     alignment and domain information
>KOG0804 consensus Cytoplasmic Zn-finger protein BRAP2 (BRCA1 associated protein) [General function prediction only] Back     alignment and domain information
>PRK15177 Vi polysaccharide export ATP-binding protein VexC; Provisional Back     alignment and domain information
>TIGR03574 selen_PSTK L-seryl-tRNA(Sec) kinase, archaeal Back     alignment and domain information
>PF00005 ABC_tran: ABC transporter This structure is on hold until Dec 1999; InterPro: IPR003439 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energise diverse biological systems Back     alignment and domain information
>PRK14957 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>cd01983 Fer4_NifH The Fer4_NifH superfamily contains a variety of proteins which share a common ATP-binding domain Back     alignment and domain information
>PF06005 DUF904: Protein of unknown function (DUF904); InterPro: IPR009252 Cell division protein ZapB is a non-essential, abundant cell division factor that is required for proper Z-ring formation Back     alignment and domain information
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR02881 spore_V_K stage V sporulation protein K Back     alignment and domain information
>PHA02530 pseT polynucleotide kinase; Provisional Back     alignment and domain information
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup Back     alignment and domain information
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>PF04665 Pox_A32: Poxvirus A32 protein; InterPro: IPR006758 This entry contains uncharacterised proteins belonging to the B354L family which include the pox virus A32 protein Back     alignment and domain information
>cd01672 TMPK Thymidine monophosphate kinase (TMPK), also known as thymidylate kinase, catalyzes the phosphorylation of thymidine monophosphate (TMP) to thymidine diphosphate (TDP) utilizing ATP as its preferred phophoryl donor Back     alignment and domain information
>PF00158 Sigma54_activat: Sigma-54 interaction domain; InterPro: IPR002078 Some bacterial regulatory proteins activate the expression of genes from promoters recognised by core RNA polymerase associated with the alternative sigma-54 factor Back     alignment and domain information
>PRK13342 recombination factor protein RarA; Reviewed Back     alignment and domain information
>PF10481 CENP-F_N: Cenp-F N-terminal domain; InterPro: IPR018463 Mitosin or centromere-associated protein-F (Cenp-F) is found bound across the centromere as one of the proteins of the outer layer of the kinetochore [] Back     alignment and domain information
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes Back     alignment and domain information
>PRK14962 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG1493 HprK Serine kinase of the HPr protein, regulates carbohydrate metabolism [Signal transduction mechanisms] Back     alignment and domain information
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional Back     alignment and domain information
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE) Back     alignment and domain information
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient Back     alignment and domain information
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional Back     alignment and domain information
>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion] Back     alignment and domain information
>PRK04220 2-phosphoglycerate kinase; Provisional Back     alignment and domain information
>TIGR02449 conserved hypothetical protein TIGR02449 Back     alignment and domain information
>PRK13768 GTPase; Provisional Back     alignment and domain information
>COG4619 ABC-type uncharacterized transport system, ATPase component [General function prediction only] Back     alignment and domain information
>PF02736 Myosin_N: Myosin N-terminal SH3-like domain; InterPro: IPR004009 This domain has an SH3-like fold Back     alignment and domain information
>TIGR00678 holB DNA polymerase III, delta' subunit Back     alignment and domain information
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group Back     alignment and domain information
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane Back     alignment and domain information
>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH) Back     alignment and domain information
>PTZ00112 origin recognition complex 1 protein; Provisional Back     alignment and domain information
>cd02022 DPCK Dephospho-coenzyme A kinase (DPCK, EC 2 Back     alignment and domain information
>PRK10416 signal recognition particle-docking protein FtsY; Provisional Back     alignment and domain information
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import Back     alignment and domain information
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment Back     alignment and domain information
>TIGR02880 cbbX_cfxQ probable Rubsico expression protein CbbX Back     alignment and domain information
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only] Back     alignment and domain information
>TIGR02868 CydC thiol reductant ABC exporter, CydC subunit Back     alignment and domain information
>smart00072 GuKc Guanylate kinase homologues Back     alignment and domain information
>PF13604 AAA_30: AAA domain; PDB: 1W36_G 3K70_G 3UPU_B 3GPL_A 3E1S_A 3GP8_A Back     alignment and domain information
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport Back     alignment and domain information
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional Back     alignment and domain information
>PRK07003 DNA polymerase III subunits gamma and tau; Validated Back     alignment and domain information
>PRK14963 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK02496 adk adenylate kinase; Provisional Back     alignment and domain information
>PRK14734 coaE dephospho-CoA kinase; Provisional Back     alignment and domain information
>TIGR00064 ftsY signal recognition particle-docking protein FtsY Back     alignment and domain information
>PRK00023 cmk cytidylate kinase; Provisional Back     alignment and domain information
>PRK00081 coaE dephospho-CoA kinase; Reviewed Back     alignment and domain information
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters Back     alignment and domain information
>PRK06620 hypothetical protein; Validated Back     alignment and domain information
>PF13173 AAA_14: AAA domain Back     alignment and domain information
>PRK09112 DNA polymerase III subunit delta'; Validated Back     alignment and domain information
>PF01695 IstB_IS21: IstB-like ATP binding protein; InterPro: IPR002611 Proteins in this entry contain an ATP/GTP binding P-loop motif Back     alignment and domain information
>cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes Back     alignment and domain information
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids Back     alignment and domain information
>PLN03025 replication factor C subunit; Provisional Back     alignment and domain information
>TIGR02902 spore_lonB ATP-dependent protease LonB Back     alignment and domain information
>PLN02796 D-glycerate 3-kinase Back     alignment and domain information
>TIGR02538 type_IV_pilB type IV-A pilus assembly ATPase PilB Back     alignment and domain information
>PRK05342 clpX ATP-dependent protease ATP-binding subunit ClpX; Provisional Back     alignment and domain information
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system Back     alignment and domain information
>PRK03731 aroL shikimate kinase II; Reviewed Back     alignment and domain information
>PRK09087 hypothetical protein; Validated Back     alignment and domain information
>PRK14969 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms] Back     alignment and domain information
>PRK10646 ADP-binding protein; Provisional Back     alignment and domain information
>COG2204 AtoC Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [Signal transduction mechanisms] Back     alignment and domain information
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system Back     alignment and domain information
>COG1428 Deoxynucleoside kinases [Nucleotide transport and metabolism] Back     alignment and domain information
>PF01637 Arch_ATPase: Archaeal ATPase; InterPro: IPR011579 This domain has been found in a number of bacterial and archaeal proteins, all of which contain a conserved P-loop motif that is involved in binding ATP Back     alignment and domain information
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein Back     alignment and domain information
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance Back     alignment and domain information
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB Back     alignment and domain information
>cd01124 KaiC KaiC is a circadian clock protein primarily found in cyanobacteria KaiC is a RecA-like ATPase, having both Walker A and Walker B motifs Back     alignment and domain information
>cd03223 ABCD_peroxisomal_ALDP Peroxisomal ATP-binding cassette transporter (Pat) is involved in the import of very long-chain fatty acids (VLCFA) into the peroxisome Back     alignment and domain information
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin Back     alignment and domain information
>PRK05537 bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Validated Back     alignment and domain information
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine Back     alignment and domain information
>PRK13947 shikimate kinase; Provisional Back     alignment and domain information
>PRK14530 adenylate kinase; Provisional Back     alignment and domain information
>PRK05439 pantothenate kinase; Provisional Back     alignment and domain information
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity Back     alignment and domain information
>PF13479 AAA_24: AAA domain Back     alignment and domain information
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D Back     alignment and domain information
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake Back     alignment and domain information
>TIGR02640 gas_vesic_GvpN gas vesicle protein GvpN Back     alignment and domain information
>PF01580 FtsK_SpoIIIE: FtsK/SpoIIIE family; InterPro: IPR002543 The FtsK/SpoIIIE domain is found extensively in a wide variety of proteins from prokaryotes and plasmids [] some of which contain up to three copies Back     alignment and domain information
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms] Back     alignment and domain information
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively Back     alignment and domain information
>PLN02348 phosphoribulokinase Back     alignment and domain information
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota Back     alignment and domain information
>PRK08154 anaerobic benzoate catabolism transcriptional regulator; Reviewed Back     alignment and domain information
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>TIGR00017 cmk cytidylate kinase Back     alignment and domain information
>cd03238 ABC_UvrA The excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion Back     alignment and domain information
>PF06414 Zeta_toxin: Zeta toxin; InterPro: IPR010488 This entry represents a domain originally identified in bacterial zeta toxin proteins, where it comprises the whole protein [] Back     alignment and domain information
>PRK05428 HPr kinase/phosphorylase; Provisional Back     alignment and domain information
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity Back     alignment and domain information
>TIGR03238 dnd_assoc_3 dnd system-associated protein 3 Back     alignment and domain information
>PRK13695 putative NTPase; Provisional Back     alignment and domain information
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional Back     alignment and domain information
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein Back     alignment and domain information
>PRK10908 cell division protein FtsE; Provisional Back     alignment and domain information
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters Back     alignment and domain information
>PRK13729 conjugal transfer pilus assembly protein TraB; Provisional Back     alignment and domain information
>TIGR01978 sufC FeS assembly ATPase SufC Back     alignment and domain information
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE Back     alignment and domain information
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ] Back     alignment and domain information
>TIGR00041 DTMP_kinase thymidylate kinase Back     alignment and domain information
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional Back     alignment and domain information
>PRK04195 replication factor C large subunit; Provisional Back     alignment and domain information
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein Back     alignment and domain information
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea Back     alignment and domain information
>PLN02318 phosphoribulokinase/uridine kinase Back     alignment and domain information
>PRK09435 membrane ATPase/protein kinase; Provisional Back     alignment and domain information
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids Back     alignment and domain information
>PRK14950 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs Back     alignment and domain information
>PRK14959 DNA polymerase III subunits gamma and tau; Provisional Back     alignment and domain information
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional Back     alignment and domain information
>TIGR02903 spore_lon_C ATP-dependent protease, Lon family Back     alignment and domain information
>PF12774 AAA_6: Hydrolytic ATP binding site of dynein motor region D1; PDB: 3VKH_A 3VKG_A 4AKI_A 4AI6_B 4AKH_A 4AKG_A 3QMZ_A Back     alignment and domain information
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03270 ABC_UvrA_I The excision repair protein UvrA domain I; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion Back     alignment and domain information
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK Back     alignment and domain information
>COG0237 CoaE Dephospho-CoA kinase [Coenzyme metabolism] Back     alignment and domain information
>TIGR02858 spore_III_AA stage III sporulation protein AA Back     alignment and domain information
>PF14532 Sigma54_activ_2: Sigma-54 interaction domain; PDB: 3CO5_B 3N70_H Back     alignment and domain information
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD Back     alignment and domain information
>PRK14242 phosphate transporter ATP-binding protein; Provisional Back     alignment and domain information
>PRK13541 cytochrome c biogenesis protein CcmA; Provisional Back     alignment and domain information
>PRK01184 hypothetical protein; Provisional Back     alignment and domain information
>cd03237 ABC_RNaseL_inhibitor_domain2 The ATPase domain 2 of RNase L inhibitor Back     alignment and domain information
>PRK13946 shikimate kinase; Provisional Back     alignment and domain information
>PF12718 Tropomyosin_1: Tropomyosin like; InterPro: IPR000533 Tropomyosins [], are a family of closely related proteins present in muscle and non-muscle cells Back     alignment and domain information
>PRK06526 transposase; Provisional Back     alignment and domain information
>cd03222 ABC_RNaseL_inhibitor The ABC ATPase RNase L inhibitor (RLI) is a key enzyme in ribosomal biogenesis, formation of translation preinitiation complexes, and assembly of HIV capsids Back     alignment and domain information
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism] Back     alignment and domain information
>TIGR03752 conj_TIGR03752 integrating conjugative element protein, PFL_4705 family Back     alignment and domain information
>PRK00625 shikimate kinase; Provisional Back     alignment and domain information
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional Back     alignment and domain information
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1048
2dfs_A1080 3-D Structure Of Myosin-V Inhibited State Length = 1e-171
3mnq_A788 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-164
2jhr_A788 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-164
1w9j_A770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-164
2aka_A776 Structure Of The Nucleotide-Free Myosin Ii Motor Do 1e-164
2xel_A776 Molecular Mechanism Of Pentachloropseudilin Mediate 1e-164
1jwy_A776 Crystal Structure Of The Dynamin A Gtpase Domain Co 1e-164
2xo8_A776 Crystal Structure Of Myosin-2 In Complex With Tribr 1e-164
1w9i_A770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-164
1yv3_A762 The Structural Basis Of Blebbistatin Inhibition And 1e-163
1oe9_A795 Crystal Structure Of Myosin V Motor With Essential 1e-163
1g8x_A1010 Structure Of A Genetically Engineered Molecular Mot 1e-163
1w9l_A770 Myosin Ii Dictyostelium Discoideum Motor Domain S45 1e-163
1d0x_A761 Dictyostelium Myosin S1dc (Motor Domain Fragment) C 1e-163
3myh_X762 Insights Into The Importance Of Hydrogen Bonding In 1e-163
1mma_A762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-163
1fmv_A761 Crystal Structure Of The Apo Motor Domain Of Dictyo 1e-163
1w9k_A770 Dictyostelium Discoideum Myosin Ii Motor Domain S45 1e-162
2y0r_X758 Structural Basis For The Allosteric Interference Of 1e-162
1mmn_A762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-162
1mmd_A762 Truncated Head Of Myosin From Dictyostelium Discoid 1e-162
1mmg_A762 X-Ray Structures Of The Mgadp, Mgatpgammas, And Mga 1e-162
2y9e_X758 Structural Basis For The Allosteric Interference Of 1e-162
1lvk_A762 X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N 1e-161
1w8j_A766 Crystal Structure Of Myosin V Motor Domain - Nucleo 1e-158
1dfk_A830 Nucleotide-Free Scallop Myosin S1-Near Rigor State 1e-155
1dfl_A831 Scallop Myosin S1 Complexed With Mgadp:vanadate-Tra 1e-155
1b7t_A835 Myosin Digested By Papain Length = 835 1e-155
1kk7_A837 Scallop Myosin In The Near Rigor Conformation Lengt 1e-155
1qvi_A840 Crystal Structure Of Scallop Myosin S1 In The Pre-P 1e-155
2ec6_A838 Placopecten Striated Muscle Myosin Ii Length = 838 1e-153
2w4g_M840 Isometrically Contracting Insect Asynchronous Fligh 1e-153
2os8_A840 Rigor-Like Structures Of Muscle Myosins Reveal Key 1e-152
3mkd_A692 Crystal Structure Of Myosin-2 Dictyostelium Discoid 1e-152
2x9h_A695 Crystal Structure Of Myosin-2 Motor Domain In Compl 1e-151
1i84_S1184 Cryo-Em Structure Of The Heavy Meromyosin Subfragme 1e-149
3dtp_B973 Tarantula Heavy Meromyosin Obtained By Flexible Doc 1e-148
3dtp_A971 Tarantula Heavy Meromyosin Obtained By Flexible Doc 1e-148
3j04_A909 Em Structure Of The Heavy Meromyosin Subfragment Of 1e-148
1br1_A820 Smooth Muscle Myosin Motor Domain-Essential Light C 1e-147
4db1_A783 Cardiac Human Myosin S1dc, Beta Isoform Complexed W 1e-146
1br2_A791 Smooth Muscle Myosin Motor Domain Complexed With Mg 1e-144
3i5g_A839 Crystal Structure Of Rigor-Like Squid Myosin S1 Len 1e-141
2mys_A843 Myosin Subfragment-1, Alpha Carbon Coordinates Only 1e-140
1m8q_A840 Molecular Models Of Averaged Rigor Crossbridges Fro 1e-140
2ycu_A995 Crystal Structure Of Human Non Muscle Myosin 2c In 1e-133
2x51_A789 M6 Delta Insert1 Length = 789 1e-127
2vas_A788 Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigo 1e-127
4dbq_A788 Myosin Vi D179y (md-insert2-cam, Delta-insert1) Pos 1e-126
3l9i_A814 Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant 1e-124
2bki_A858 Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal St 1e-123
4e7s_A798 Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke Stat 1e-123
2bkh_A814 Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc 1e-123
2v26_A784 Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) L 1e-123
4anj_A1052 Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke St 1e-123
4e7z_A798 Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal F 1e-122
4dbp_A814 Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal 1e-122
4dbr_A786 Myosin Vi D179y (md) Pre-powerstroke State Length = 1e-122
4a7f_C697 Structure Of The Actin-Tropomyosin-Myosin Complex ( 1e-121
1lkx_A697 Motor Domain Of Myoe, A Class-I Myosin Length = 697 1e-121
>pdb|2DFS|A Chain A, 3-D Structure Of Myosin-V Inhibited State Length = 1080 Back     alignment and structure 
Iteration: 1

 Score =  598 bits (1541), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 342/810 (42%), Positives = 488/810 (60%), Gaps = 46/810 (5%)
Query: 24  TGELLPA-NPDILEGVDDLIQLSYLNEPSVLNNIQYRY-SRDMIYSKAGPVLIAVNPFKA 81
           T EL P  NPDIL G +DL  LSYL+EP+VL+N++ R+    +IY+  G VL+A+NP++ 
Sbjct: 56  TKELPPLRNPDILVGENDLTALSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYEQ 115
Query: 82  VPIYGNKFITAYRQKVMDS--PHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKF 139
           +PIYG   I AY  + M    PH++A+A+ AY +M  D  NQSII+SGESGAGKT +AK+
Sbjct: 116 LPIYGEDIINAYSGQNMGDMDPHIFAVAEEAYKQMARDERNQSIIVSGESGAGKTVSAKY 175
Query: 140 AMQYLAALGGGSE--GIEYEILQTNHILEAFGNAKTSRNDNSSRFGKLIEIHFSAFGKIC 197
           AM+Y A + G +    +E ++L +N I+E+ GNAKT+RNDNSSRFGK IEI F    +I 
Sbjct: 176 AMRYFATVSGSASEANVEEKVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFDKRYRII 235
Query: 198 GAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGA--PSFLKERLNLKVANDYNYLNQSEC 255
           GA ++T+LLEKSRVV  A  ER+YHIFYQLCA A  P F  + L L  AN ++Y  Q   
Sbjct: 236 GANMRTYLLEKSRVVFQAEEERNYHIFYQLCASAALPEF--KTLRLGNANYFHYTKQGGS 293
Query: 256 LTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIA 315
             IDG+DDA+   N  +A  ++ I    +   F +LA +L LGN+ F   D+++      
Sbjct: 294 PVIDGIDDAKEMVNTRQACTLLGISDSYQMGIFRILAGILHLGNVEFASRDSDSCAIPPK 353
Query: 316 DEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFD 375
            + +T    LMG   +E+   L   K+    ++  K ++   AI++RDALAK IY +LF+
Sbjct: 354 HDPLTIFCDLMGVDYEEMAHWLCHRKLATATETYIKPISKLHAINARDALAKHIYANLFN 413
Query: 376 WIVEQINKSLE-VGKQCTGRSINILDIYGFESFKKNSFEQFCINYANERLQQHFNRHLFK 434
           WIV+ +NK+L    KQ +   I +LDIYGFE+F+ NSFEQFCINYANE+LQQ FN H+FK
Sbjct: 414 WIVDHVNKALHSTVKQHS--FIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNMHVFK 471
Query: 435 LEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLTFANKL-KQ 493
           LEQEEY  + + WT ++F DN+ C+NLIE K +GVL LLDEE   PK +D T+A KL   
Sbjct: 472 LEQEEYMKEQIPWTLIDFYDNQPCINLIEAK-MGVLDLLDEECKMPKGSDDTWAQKLYNT 530
Query: 494 HLGSNSCFKGER--GRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLL-SSCTCQVL- 549
           HL   + F+  R   +AF I+H+A +V Y   GFLEKN+D +  + I++L SS   ++L 
Sbjct: 531 HLNKCALFEKPRLSNKAFIIKHFADKVEYQCEGFLEKNKDTVYEEQIKVLKSSKKFKLLP 590
Query: 550 QLFXXXXXXXXXXXXXXXXXXXLD----------------TQKQSVGTKFKGQLFKLMHQ 593
           +LF                   L                   K++VG +F+  L  LM  
Sbjct: 591 ELFQDEEKAISPTSATPSGRVPLSRTPVKPAKARPGQTSKEHKKTVGHQFRNSLHLLMET 650
Query: 594 LENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYPTRMRHQEFAGR 653
           L  T PH++RCIKPN  + P  ++E   +QQ R CGVLE +RIS +G+P+R  +QEF  R
Sbjct: 651 LNATTPHYVRCIKPNDFKFPFTFDEKRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSR 710
Query: 654 YGVLLSEKQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-A 712
           Y VL+ +K +  D       VL++  +  + YQ G TK++ R+GQ+A LE  R   L+ A
Sbjct: 711 YRVLMKQKDVLSDRKQTCKNVLEKLILDKDKYQFGKTKIFFRAGQVAYLEKIRADKLRAA 770
Query: 713 IIRLQKCFRGYQARSRFRELCNGVITLQSFARGENTRRRHASLGKSCSAVVPE------- 765
            IR+QK  RG+  R ++  +    IT+Q + RG   R     L ++ +A++ +       
Sbjct: 771 CIRIQKTIRGWLMRKKYMRMRRAAITIQRYVRGHQARCYATFLRRTRAAIIIQKFQRMYV 830
Query: 766 --IRDEQLRE-IICLQSAIRGWLVRKQLKM 792
              R + +R+  I LQ+ +RG+LVR + +M
Sbjct: 831 VRKRYQCMRDATIALQALLRGYLVRNKYQM 860
>pdb|3MNQ|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp- Metavanadate And Resveratrol Length = 788 Back     alignment and structure
>pdb|2JHR|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentabromopseudilin Length = 788 Back     alignment and structure
>pdb|1W9J|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|2AKA|A Chain A, Structure Of The Nucleotide-Free Myosin Ii Motor Domain From Dictyostelium Discoideum Fused To The Gtpase Domain Of Dynamin 1 From Rattus Norvegicus Length = 776 Back     alignment and structure
>pdb|2XEL|A Chain A, Molecular Mechanism Of Pentachloropseudilin Mediated Inhibition Of Myosin Motor Activity Length = 776 Back     alignment and structure
>pdb|1JWY|A Chain A, Crystal Structure Of The Dynamin A Gtpase Domain Complexed With Gdp, Determined As Myosin Fusion Length = 776 Back     alignment and structure
>pdb|2XO8|A Chain A, Crystal Structure Of Myosin-2 In Complex With Tribromodichloropseudilin Length = 776 Back     alignment and structure
>pdb|1W9I|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456y Bound With Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|1YV3|A Chain A, The Structural Basis Of Blebbistatin Inhibition And Specificity For Myosin Ii Length = 762 Back     alignment and structure
>pdb|1OE9|A Chain A, Crystal Structure Of Myosin V Motor With Essential Light Chain - Nucleotide-Free Length = 795 Back     alignment and structure
>pdb|1G8X|A Chain A, Structure Of A Genetically Engineered Molecular Motor Length = 1010 Back     alignment and structure
>pdb|1W9L|A Chain A, Myosin Ii Dictyostelium Discoideum Motor Domain S456e Bound With Mgadp-Alf4 Length = 770 Back     alignment and structure
>pdb|1D0X|A Chain A, Dictyostelium Myosin S1dc (Motor Domain Fragment) Complexed With M-Nitrophenyl Aminoethyldiphosphate Beryllium Trifluoride. Length = 761 Back     alignment and structure
>pdb|3MYH|X Chain X, Insights Into The Importance Of Hydrogen Bonding In The Gamma- Phosphate Binding Pocket Of Myosin: Structural And Functional Studies Of Ser236 Length = 762 Back     alignment and structure
>pdb|1MMA|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1FMV|A Chain A, Crystal Structure Of The Apo Motor Domain Of Dictyostellium Myosin Ii Length = 761 Back     alignment and structure
>pdb|1W9K|A Chain A, Dictyostelium Discoideum Myosin Ii Motor Domain S456e With Bound Mgadp-Befx Length = 770 Back     alignment and structure
>pdb|2Y0R|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|1MMN|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1MMD|A Chain A, Truncated Head Of Myosin From Dictyostelium Discoideum Complexed With Mgadp-Bef3 Length = 762 Back     alignment and structure
>pdb|1MMG|A Chain A, X-Ray Structures Of The Mgadp, Mgatpgammas, And Mgamppnp Complexes Of The Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|2Y9E|X Chain X, Structural Basis For The Allosteric Interference Of Myosin Function By Mutants G680a And G680v Of Dictyostelium Myosin-2 Length = 758 Back     alignment and structure
>pdb|1LVK|A Chain A, X-Ray Crystal Structure Of The Mg (Dot) 2'(3')-O-(N- Methylanthraniloyl) Nucleotide Bound To Dictyostelium Discoideum Myosin Motor Domain Length = 762 Back     alignment and structure
>pdb|1W8J|A Chain A, Crystal Structure Of Myosin V Motor Domain - Nucleotide-Free Length = 766 Back     alignment and structure
>pdb|1DFK|A Chain A, Nucleotide-Free Scallop Myosin S1-Near Rigor State Length = 830 Back     alignment and structure
>pdb|1DFL|A Chain A, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition State Length = 831 Back     alignment and structure
>pdb|1B7T|A Chain A, Myosin Digested By Papain Length = 835 Back     alignment and structure
>pdb|1KK7|A Chain A, Scallop Myosin In The Near Rigor Conformation Length = 837 Back     alignment and structure
>pdb|1QVI|A Chain A, Crystal Structure Of Scallop Myosin S1 In The Pre-Power Stroke State To 2.6 Angstrom Resolution: Flexibility And Function In The Head Length = 840 Back     alignment and structure
>pdb|2EC6|A Chain A, Placopecten Striated Muscle Myosin Ii Length = 838 Back     alignment and structure
>pdb|2OS8|A Chain A, Rigor-Like Structures Of Muscle Myosins Reveal Key Mechanical Elements In The Transduction Pathways Of This Allosteric Motor Length = 840 Back     alignment and structure
>pdb|3MKD|A Chain A, Crystal Structure Of Myosin-2 Dictyostelium Discoideum Motor Domain S456y Mutant In Complex With Adp-Orthovanadate Length = 692 Back     alignment and structure
>pdb|2X9H|A Chain A, Crystal Structure Of Myosin-2 Motor Domain In Complex With Adp-Metavanadate And Pentachlorocarbazole Length = 695 Back     alignment and structure
>pdb|1I84|S Chain S, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of Chicken Gizzard Smooth Muscle Myosin With Regulatory Light Chain In The Dephosphorylated State. Only C Alphas Provided For Regulatory Light Chain. Only Backbone Atoms Provided For S2 Fragment. Length = 1184 Back     alignment and structure
>pdb|3DTP|B Chain B, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 973 Back     alignment and structure
>pdb|3DTP|A Chain A, Tarantula Heavy Meromyosin Obtained By Flexible Docking To Tarantula Muscle Thick Filament Cryo-Em 3d-Map Length = 971 Back     alignment and structure
>pdb|3J04|A Chain A, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 909 Back     alignment and structure
>pdb|1BR1|A Chain A, Smooth Muscle Myosin Motor Domain-Essential Light Chain Complex With Mgadp.Alf4 Bound At The Active Site Length = 820 Back     alignment and structure
>pdb|4DB1|A Chain A, Cardiac Human Myosin S1dc, Beta Isoform Complexed With Mn-Amppnp Length = 783 Back     alignment and structure
>pdb|1BR2|A Chain A, Smooth Muscle Myosin Motor Domain Complexed With Mgadp.Alf4 Length = 791 Back     alignment and structure
>pdb|3I5G|A Chain A, Crystal Structure Of Rigor-Like Squid Myosin S1 Length = 839 Back     alignment and structure
>pdb|2MYS|A Chain A, Myosin Subfragment-1, Alpha Carbon Coordinates Only For The Two Light Chains Length = 843 Back     alignment and structure
>pdb|1M8Q|A Chain A, Molecular Models Of Averaged Rigor Crossbridges From Tomograms Of Insect Flight Muscle Length = 840 Back     alignment and structure
>pdb|2YCU|A Chain A, Crystal Structure Of Human Non Muscle Myosin 2c In Pre-power Stroke State Length = 995 Back     alignment and structure
>pdb|2X51|A Chain A, M6 Delta Insert1 Length = 789 Back     alignment and structure
>pdb|2VAS|A Chain A, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State Length = 788 Back     alignment and structure
>pdb|4DBQ|A Chain A, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor State Length = 788 Back     alignment and structure
>pdb|3L9I|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal Structure Length = 814 Back     alignment and structure
>pdb|2BKI|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure Length = 858 Back     alignment and structure
>pdb|4E7S|A Chain A, Myosin Vi D23r I24r R569e (Md) Pre-Powerstroke State Length = 798 Back     alignment and structure
>pdb|2BKH|A Chain A, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 814 Back     alignment and structure
>pdb|2V26|A Chain A, Myosin Vi (Md) Pre-Powerstroke State (Mg.Adp.Vo4) Length = 784 Back     alignment and structure
>pdb|4ANJ|A Chain A, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State (Mg.Adp.Alf4) Length = 1052 Back     alignment and structure
>pdb|4E7Z|A Chain A, Myosin Vi (Md) Pre-Powerstroke State, P21 Crystal Form Length = 798 Back     alignment and structure
>pdb|4DBP|A Chain A, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal Structure Length = 814 Back     alignment and structure
>pdb|4DBR|A Chain A, Myosin Vi D179y (md) Pre-powerstroke State Length = 786 Back     alignment and structure
>pdb|4A7F|C Chain C, Structure Of The Actin-Tropomyosin-Myosin Complex (Rigor Atm 3) Length = 697 Back     alignment and structure
>pdb|1LKX|A Chain A, Motor Domain Of Myoe, A Class-I Myosin Length = 697 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query1048
2ycu_A995 Non muscle myosin 2C, alpha-actinin; motor protein 0.0
1g8x_A1010 Myosin II heavy chain fused to alpha-actinin 3; mo 0.0
1w7j_A795 Myosin VA; motor protein, unconventional myosin, m 0.0
2v26_A784 Myosin VI; calmodulin-binding, nucleotide-binding, 0.0
2dfs_A1080 Myosin-5A; myosin-V, inhibited state, cryoelectron 0.0
1w9i_A770 Myosin II heavy chain; molecular motor, ATPase, mo 0.0
1kk8_A837 Myosin heavy chain, striated muscle; actin-detache 0.0
4db1_A783 Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb 0.0
1lkx_A697 Myosin IE heavy chain; myosin motor domain, lever 0.0
1i84_S1184 Smooth muscle myosin heavy chain; muscle protein, 0.0
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 1e-22
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 5e-08
2ix7_C58 Myosin-5A; contractIle protein/metal binding, acti 7e-10
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A* Length = 995 Back     alignment and structure
 Score = 1111 bits (2875), Expect = 0.0
 Identities = 303/962 (31%), Positives = 474/962 (49%), Gaps = 65/962 (6%)

Query: 2   IQSTSGDEAFV-LLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRY 60
           ++    +EA V L  +G  +++   ++   NP      +D+ +L+ LNE SVL+N++ RY
Sbjct: 25  LRDEGEEEAEVELAESGRRLRLPRDQIQRMNPPKFSKAEDMAELTCLNEASVLHNLRERY 84

Query: 61  SRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--SPHVYAIADTAYNEMMGDG 118
              +IY+ +G   + +NP+K +PIY    +  YR K      PHVYA+ + AY  M+ D 
Sbjct: 85  YSGLIYTYSGLFCVVINPYKQLPIYTEAIVEMYRGKKRHEVPPHVYAVTEGAYRSMLQDR 144

Query: 119 VNQSIIISGESGAGKTETAKFAMQYLAALGGGSEG---------IEYEILQTNHILEAFG 169
            +QSI+ +GESGAGKTE  K  +QYLA +    +G         +E ++LQ N ILEAFG
Sbjct: 145 EDQSILCTGESGAGKTENTKKVIQYLAHVASSPKGRKEPGVPGELERQLLQANPILEAFG 204

Query: 170 NAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCA 229
           NAKT +NDNSSRFGK I I+F   G I GA I+T+LLEKSR ++ A  E S+HIFYQL  
Sbjct: 205 NAKTVKNDNSSRFGKFIRINFDVAGYIVGANIETYLLEKSRAIRQAKDECSFHIFYQLLG 264

Query: 230 GAPSFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFA 289
           GA   LK  L L+  + Y +L            + + F   +E+L ++    E+      
Sbjct: 265 GAGEQLKADLLLEPCSHYRFLTNGPS--SSPGQERELFQETLESLRVLGFSHEEIISMLR 322

Query: 290 MLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSI 349
           M++AVL  GNI+ +   N +   +  + A      L+G    +   AL T +I+ G+D +
Sbjct: 323 MVSAVLQFGNIALKRERNTDQATMPDNTAAQKLCRLLGLGVTDFSRALLTPRIKVGRDYV 382

Query: 350 AKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKK 409
            K  T +QA  + +ALAK  Y  LF W+V ++N++L+   +     + ILDI GFE F+ 
Sbjct: 383 QKAQTKEQADFALEALAKATYERLFRWLVLRLNRALDRSPRQGASFLGILDIAGFEIFQL 442

Query: 410 NSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFE-DNEECLNLIEK--KP 466
           NSFEQ CINY NE+LQQ FN  +F LEQEEY+ +G+ WT ++F  D + C++LIE+   P
Sbjct: 443 NSFEQLCINYTNEKLQQLFNHTMFVLEQEEYQREGIPWTFLDFGLDLQPCIDLIERPANP 502

Query: 467 LGVLSLLDEESNFPKATDLTFANKLKQHLGSNSCFKGERGR----AFSIRHYAGEVPYDT 522
            G+L+LLDEE  FPKATD +F  K+ Q  G +  F+  R       FS+ HYAG+V Y  
Sbjct: 503 PGLLALLDEECWFPKATDKSFVEKVAQEQGGHPKFQRPRHLRDQADFSVLHYAGKVDYKA 562

Query: 523 NGFLEKNRDPLQTDIIQLLSSCTCQVL-QLFASKMLKPSPKPAASSQPGALDTQ-----K 576
           N +L KN DPL  ++  LL   T ++  +++         +  +S   G    +      
Sbjct: 563 NEWLMKNMDPLNDNVAALLHQSTDRLTAEIWKDVEGIVGLEQVSSLGDGPPGGRPRRGMF 622

Query: 577 QSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRI 636
           ++VG  +K  L +LM  L NT P F+RCI PN ++  G  E  LVL Q RC GVLE +RI
Sbjct: 623 RTVGQLYKESLSRLMATLSNTNPSFVRCIVPNHEKRAGKLEPRLVLDQLRCNGVLEGIRI 682

Query: 637 SRSGYPTRMRHQEFAGRYGVLLSEK--QLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYL 694
            R G+P R+  QEF  RY +L      +   D       ++Q   + P +Y+VG +K++ 
Sbjct: 683 CRQGFPNRILFQEFRQRYEILTPNAIPKGFMDGKQACEKMIQALELDPNLYRVGQSKIFF 742

Query: 695 RSGQLAALEDRRKQVLQA---IIRLQKCFRGYQARS---RFRELCNGVITLQSFARGENT 748
           R+G LA LE+ R         + R  +  +    +      R+  + + ++QSF      
Sbjct: 743 RAGVLAQLEEERASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKE 802

Query: 749 RRRHASLGKSCSAVV--PEIRDEQLR----------------------EIICLQSAIRGW 784
            ++     K              Q +                          L+ A +  
Sbjct: 803 YKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEH 862

Query: 785 LVRKQLKMHKLKQSNPVNAKVKR-RSGRKSSDMKDVPQEQVQALPTALAELQRRVLKAEA 843
               ++++ + K+   +  K  R     ++                ++  +Q ++   EA
Sbjct: 863 AEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEA 922

Query: 844 TLGQKEEENAALREQL-----QQYDAKWLEYEAKMKSMEEMWQKQMASLQMSLAAARKSL 898
             G+ +         L     Q  +  +       +  +  + +Q   ++ S    + +L
Sbjct: 923 FDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTL 982

Query: 899 AS 900
            +
Sbjct: 983 LA 984
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 Back     alignment and structure
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A Length = 795 Back     alignment and structure
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A* Length = 784 Back     alignment and structure
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 Back     alignment and structure
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ... Length = 770 Back     alignment and structure
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ... Length = 837 Back     alignment and structure
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A* Length = 783 Back     alignment and structure
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9 Length = 697 Back     alignment and structure
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>2ix7_C Myosin-5A; contractIle protein/metal binding, actin-binding, UBL conjugation, Ca2+ regulation, myosin, calcium, IQ motif, acetylation; 2.5A {Mus musculus} Length = 58 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 1048
d1kk8a2789 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain 0.0
d2mysa2794 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain 0.0
d1w7ja2730 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chick 0.0
d1br2a2710 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chick 0.0
d1d0xa2712 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain 0.0
d1lkxa_684 c.37.1.9 (A:) Myosin S1, motor domain {Dictyosteli 0.0
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 789 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score =  742 bits (1917), Expect = 0.0
 Identities = 288/775 (37%), Positives = 433/775 (55%), Gaps = 35/775 (4%)

Query: 7   GDEAFVLLSNGNVVKVSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIY 66
            D  F  L+      +        NP   E ++D+  ++YLNE SVL N++ RY+  +IY
Sbjct: 6   SDPDFQYLAVDRKKLMKEQTAAFMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIY 65

Query: 67  SKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMDS--PHVYAIADTAYNEMMGDGVNQSII 124
           + +G   IAVNP++ +PIY +  I  YR K      PH++++AD AY  M+ D  NQS +
Sbjct: 66  TYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEIPPHLFSVADNAYQNMVTDRENQSCL 125

Query: 125 ISGESGAGKTETAKFAMQYLAALGGGSEG------------IEYEILQTNHILEAFGNAK 172
           I+GESGAGKTE  K  + YLA +    +             +E +I+Q N +LEA+GNAK
Sbjct: 126 ITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEAYGNAK 185

Query: 173 TSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAP 232
           T+RN+NSSRFGK I IHF   GKI GA I+T+LLEKSRV    + ER+YHIFYQ+C+ A 
Sbjct: 186 TTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAI 245

Query: 233 SFLKERLNLKVANDYNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLA 292
             L + + +   +         CLT+D +DD + F    EA DI+   KE+++  F   A
Sbjct: 246 PELNDVMLVTPDSGLYSFINQGCLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTA 305

Query: 293 AVLWLGNISFQVIDNENHVEVIADEAVTTAAMLMGCSSDELMLALSTHKIQAGKDSIAKK 352
           ++L +G + F+    E   E          A L G ++ +L+ AL   K++ G + + K 
Sbjct: 306 SILHMGEMKFKQRPREEQAESDGTAEAEKVAFLCGINAGDLLKALLKPKVKVGTEMVTKG 365

Query: 353 LTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFESFKKNSF 412
             + Q ++S  ALAK +Y  +F+W+V ++NK+L+   +     I +LDI GFE F  NSF
Sbjct: 366 QNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKAKRN-YYIGVLDIAGFEIFDFNSF 424

Query: 413 EQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSL 472
           EQ CINY NERLQQ FN H+F LEQEEY+ +G+ W  ++F  + +    + +KP+G+LS+
Sbjct: 425 EQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSI 484

Query: 473 LDEESNFPKATDLTFANKL-KQHLGSNSCF--------KGERGRAFSIRHYAGEVPYDTN 523
           L+EE  FPKA D +F +KL + H+G N  F          +    F + HYAG VPY   
Sbjct: 485 LEEECMFPKADDKSFQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSIT 544

Query: 524 GFLEKNRDPLQTDIIQLLSSCTCQVL-QLFASKMLKPSPKPAASSQPGALDTQKQSVGTK 582
           G+LEKN+DP+  +++ LL +    ++ +LF +    P        +     +  Q++   
Sbjct: 545 GWLEKNKDPINENVVALLGASKEPLVAELFKA----PEEPAGGGKKKKGKSSAFQTISAV 600

Query: 583 FKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRISRSGYP 642
            +  L KLM  L +T PHF+RCI PN  + PG+ + +LVL Q +C GVLE +RI R G+P
Sbjct: 601 HRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRICRKGFP 660

Query: 643 TRMRHQEFAGRYGVLLSE--KQLSQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLA 700
           +R+ + EF  RY +L      Q   D  ++S  +L    + P  Y++G TK++ ++G L 
Sbjct: 661 SRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLG 720

Query: 701 ALEDRRKQVL-QAIIRLQKCFRGYQARSRFRELCN---GVITLQSFARGENTRRR 751
            LE+ R + L + I   Q   RGY  R  +++L +   G+  +Q   R     R 
Sbjct: 721 NLEEMRDERLSKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 794 Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Length = 730 Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Length = 710 Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Length = 712 Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Length = 684 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query1048
d1kk8a2789 Myosin S1, motor domain {Bay scallop (Aequipecten 100.0
d2mysa2794 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1w7ja2730 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1d0xa2712 Myosin S1, motor domain {Dictyostelium discoideum 100.0
d1br2a2710 Myosin S1, motor domain {Chicken (Gallus gallus), 100.0
d1lkxa_684 Myosin S1, motor domain {Dictyostelium discoideum, 100.0
d2mysa2794 Myosin S1, motor domain {Chicken (Gallus gallus), 98.21
d1kk8a2789 Myosin S1, motor domain {Bay scallop (Aequipecten 98.19
d1m7ga_208 Adenosine-5'phosphosulfate kinase (APS kinase) {Fu 94.04
d1iqpa2231 Replication factor C {Archaeon Pyrococcus furiosus 93.92
d1w7ja2730 Myosin S1, motor domain {Chicken (Gallus gallus), 92.28
d1sxjd2237 Replication factor C2 {Baker's yeast (Saccharomyce 92.23
d1njfa_239 delta prime subunit of DNA polymerase III, N-domai 92.04
d1m8pa3183 ATP sulfurylase C-terminal domain {Fungus (Penicil 91.1
d1np6a_170 Molybdopterin-guanine dinucleotide biosynthesis pr 90.37
d1sxjc2227 Replication factor C3 {Baker's yeast (Saccharomyce 89.83
d1qhxa_178 Chloramphenicol phosphotransferase {Streptomyces v 89.41
d1g6oa_323 Hexameric traffic ATPase, HP0525 {Helicobacter pyl 89.37
d1khta_190 Adenylate kinase {Archaeon Methanococcus voltae [T 89.15
d1sxjb2224 Replication factor C4 {Baker's yeast (Saccharomyce 88.72
d1a5ta2207 delta prime subunit of DNA polymerase III, N-domai 88.69
d2i3ba1189 Cancer-related NTPase, C1orf57 {Human (Homo sapien 88.58
d1knqa_171 Gluconate kinase {Escherichia coli [TaxId: 562]} 88.49
d1rkba_173 Adenylate kinase {Human (Homo sapiens), isoenzyme 88.44
d1ry6a_330 Kinesin {Malaria parasite (Plasmodium falciparum) 88.38
d1qf9a_194 UMP/CMP kinase {Dictyostelium discoideum [TaxId: 4 88.01
d1ly1a_152 Polynucleotide kinase, kinase domain {Bacteriophag 87.75
d1ye8a1178 Hypothetical kinase-like protein Aq_1292 {Aquifex 87.62
d1x6va3195 Adenosine-5'phosphosulfate kinase (APS kinase) {Hu 87.46
d1fnna2276 CDC6, N-domain {Archaeon Pyrobaculum aerophilum [T 87.15
d1rz3a_198 Hypothetical protein rbstp0775 {Bacillus stearothe 87.15
d1w5sa2287 CDC6-like protein APE0152, N-terminal domain {Aero 87.1
d1kaga_169 Shikimate kinase (AroK) {Escherichia coli [TaxId: 86.83
d1nksa_194 Adenylate kinase {Archaeon Sulfolobus acidocaldari 86.26
d1bifa1213 6-phosphofructo-2-kinase/fructose-2,6-bisphosphata 86.14
d1xjca_165 Molybdopterin-guanine dinucleotide biosynthesis pr 85.84
d1p9ra_401 Extracellular secretion NTPase EpsE {Vibrio choler 85.62
d1br2a146 Myosin S1 fragment, N-terminal domain {Chicken (Ga 85.52
d1lvga_190 Guanylate kinase {Mouse (Mus musculus) [TaxId: 100 85.25
d1e6ca_170 Shikimate kinase (AroK) {Erwinia chrysanthemi [Tax 84.98
d1um8a_364 ClpX {Helicobacter pylori [TaxId: 210]} 84.89
d1bg2a_323 Kinesin {Human (Homo sapiens) [TaxId: 9606]} 84.34
d1y63a_174 Probable kinase LmjF30.1890 {Leishmania major [Tax 84.06
d1viaa_161 Shikimate kinase (AroK) {Campylobacter jejuni [Tax 83.74
d1sxja2253 Replication factor C1 {Baker's yeast (Saccharomyce 83.58
d2bdta1176 Hypothetical protein BH3686 {Bacillus halodurans [ 83.56
d2ncda_368 Kinesin motor Ncd (non-claret disjunctional) {Frui 83.3
d1gkya_186 Guanylate kinase {Baker's yeast (Saccharomyces cer 83.2
d1kkma_176 HPr kinase HprK C-terminal domain {Lactobacillus c 82.76
d1lw7a2192 Transcriptional regulator NadR, ribosylnicotinamid 82.45
d1goja_354 Kinesin {Neurospora crassa [TaxId: 5141]} 82.26
d2zfia1349 Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090 82.07
d1in4a2238 Holliday junction helicase RuvB {Thermotoga mariti 82.02
d2pmka1241 Haemolysin B ATP-binding protein {Escherichia coli 81.96
d1knxa2177 HPr kinase HprK C-terminal domain {Mycoplasma pneu 81.83
d1x88a1345 Kinesin {Human (Homo sapiens), mitotic kinesin eg5 81.78
d1znwa1182 Guanylate kinase {Mycobacterium tuberculosis [TaxI 81.75
d1ko7a2169 HPr kinase HprK C-terminal domain {Staphylococcus 81.74
d1uj2a_213 Uridine-cytidine kinase 2 {Human (Homo sapiens) [T 81.6
d1sq5a_308 Pantothenate kinase PanK {Escherichia coli [TaxId: 81.43
d1zp6a1176 Hypothetical protein Atu3015 {Agrobacterium tumefa 81.39
d2gnoa2198 gamma subunit of DNA polymerase III, N-domain {The 81.27
d1gsia_208 Thymidylate kinase {Mycobacterium tuberculosis [Ta 80.7
d1zaka1189 Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} 80.67
d3b60a1253 Multidrug resistance ABC transporter MsbA, C-termi 80.37
d1jj7a_251 Peptide transporter Tap1, C-terminal ABC domain {H 80.37
d1sdma_364 Kinesin heavy chain-like protein {Potato (Solanum 80.36
d1nn5a_209 Thymidylate kinase {Human (Homo sapiens) [TaxId: 9 80.04
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: P-loop containing nucleoside triphosphate hydrolases
superfamily: P-loop containing nucleoside triphosphate hydrolases
family: Motor proteins
domain: Myosin S1, motor domain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=100.00  E-value=0  Score=1600.79  Aligned_cols=729  Identities=39%  Similarity=0.673  Sum_probs=667.3

Q ss_pred             EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHCCCC--
Q ss_conf             738987689999568944212478989635899999976119632246893374179977999998999998505899--
Q 001592           22 VSTGELLPANPDILEGVDDLIQLSYLNEPSVLNNIQYRYSRDMIYSKAGPVLIAVNPFKAVPIYGNKFITAYRQKVMD--   99 (1048)
Q Consensus        22 v~~~~~~~~n~~~~~~~~Dl~~L~~l~e~~vl~~L~~Ry~~~~iYT~~G~~LiavNP~k~~~~y~~~~~~~y~~~~~~--   99 (1048)
                      ++.+.+..+||+.++++|||+.|++|||++||++|+.||.+|.||||+||+|||||||+++|+|+++++..|+++...  
T Consensus        21 ~~~~~~~~~np~~~~~v~Dl~~L~~l~E~~vl~~L~~Ry~~~~iYT~~G~iLiavNP~k~l~iy~~~~~~~y~~~~~~~~  100 (789)
T d1kk8a2          21 MKEQTAAFMNPPKFEKLEDMANMTYLNEASVLYNLRSRYTSGLIYTYSGLFCIAVNPYRRLPIYTDSVIAKYRGKRKTEI  100 (789)
T ss_dssp             CC--CCCCCCCGGGTTCSBGGGSSCCSHHHHHHHHHHHHHTTCCEEEETTEEEEECCSSCCSTTSHHHHHHHTTCCGGGS
T ss_pred             CCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCHHHHHHHCCCCCCCC
T ss_conf             56022343698523586310068999989999999999868996371888899988998889999999999708987899


Q ss_pred             CCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCC------------CHHHHHHHHHHHHHHH
Q ss_conf             9806578999999766179862999719889972469999999998706999------------4289999852589998
Q 001592          100 SPHVYAIADTAYNEMMGDGVNQSIIISGESGAGKTETAKFAMQYLAALGGGS------------EGIEYEILQTNHILEA  167 (1048)
Q Consensus       100 ~PHiyaiA~~Ay~~m~~~~~~QsIiisGeSGsGKTe~~k~~l~yLa~~~~~~------------~~i~~~il~s~~iLEA  167 (1048)
                      |||||++|+.||+.|..+++||||||||||||||||++|++|+||+.++++.            ..|+++|+++||||||
T Consensus       101 ~PHiyavA~~Ay~~m~~~~~nQ~IiisGESGaGKTe~~K~il~yL~~~~~~~~~~~~~~~~~~~~~i~~~il~~npiLEA  180 (789)
T d1kk8a2         101 PPHLFSVADNAYQNMVTDRENQSCLITGESGAGKTENTKKVIMYLAKVACAVKKKDEEASDKKEGSLEDQIIQANPVLEA  180 (789)
T ss_dssp             CCCHHHHHHHHHHHHHHHTSEEEEEEECSTTSSHHHHHHHHHHHHHHHSCCCCCC--------CCCHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf             98389999999999997189947999708999879999999999998715666655434555556399999987689985


Q ss_pred             HHCCCCCCCCCCCCCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHCCCCC-CCC
Q ss_conf             5138678999988655368999779995100675210037621110268986424578985099956687439899-888
Q 001592          168 FGNAKTSRNDNSSRFGKLIEIHFSAFGKICGAKIQTFLLEKSRVVQLAAGERSYHIFYQLCAGAPSFLKERLNLKV-AND  246 (1048)
Q Consensus       168 FGnAkT~~N~NSSRfGk~i~l~f~~~g~i~Ga~i~~yLLEksRVv~~~~gErnfHIFYqLl~g~~~~~~~~l~L~~-~~~  246 (1048)
                      ||||||++|+||||||||++|+|+..|.|+||+|.+||||||||+.+++||||||||||||+|+++++++.+.|.+ +..
T Consensus       181 FGNAkT~~N~NSSRFGk~~~l~f~~~g~i~ga~i~~yLLEksRvv~~~~gErnfHIFY~ll~G~~~~~~~~~~l~~~~~~  260 (789)
T d1kk8a2         181 YGNAKTTRNNNSSRFGKFIRIHFGPTGKIAGADIETYLLEKSRVTYQQSAERNYHIFYQICSNAIPELNDVMLVTPDSGL  260 (789)
T ss_dssp             HHEECCSSCTTEESSEEEEEEEECTTSSEEEEEEEEECCCGGGGTCCCTTCCSBHHHHHHTSCSSGGGHHHHTCCSCGGG
T ss_pred             CCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHH
T ss_conf             53567889896477235679898899977454027864877504632654420699999982897999998379982544


Q ss_pred             CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEECCHHHHHHHHHHC
Q ss_conf             84445899754589232999999999985329997889999999999987328303540797505644748999999841
Q 001592          247 YNYLNQSECLTIDGVDDAQNFHNLMEALDIVLIRKEDREQTFAMLAAVLWLGNISFQVIDNENHVEVIADEAVTTAAMLM  326 (1048)
Q Consensus       247 y~yL~~~~~~~~~~~dd~~~f~~l~~Al~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~~~~~l~~~a~LL  326 (1048)
                      |.|++++ |..++++||+++|+.++.||+.|||+++++..||+|||||||||||+|...++++.+.+.+.+.++.||.||
T Consensus       261 ~~~l~~~-~~~~~~~~d~~~f~~~~~al~~lg~~~~e~~~i~~ilaaILhLGni~F~~~~~~~~~~~~~~~~~~~~a~LL  339 (789)
T d1kk8a2         261 YSFINQG-CLTVDNIDDVEEFKLCDEAFDILGFTKEEKQSMFKCTASILHMGEMKFKQRPREEQAESDGTAEAEKVAFLC  339 (789)
T ss_dssp             CTTTCSS-CSCBTTBCHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTTCCEEC----CCCEESCSHHHHHHHHHH
T ss_pred             HHHHCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCHHHHHHHHHHH
T ss_conf             5765399-836688656999999999987539989999999988898751044035415875422148868999999884


Q ss_pred             CCCHHHHHHHHHCCEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCC
Q ss_conf             99998899857002501388516623898899999999999999999999998310111358766751167721567766
Q 001592          327 GCSSDELMLALSTHKIQAGKDSIAKKLTLQQAIDSRDALAKFIYGSLFDWIVEQINKSLEVGKQCTGRSINILDIYGFES  406 (1048)
Q Consensus       327 gv~~~~L~~~Lt~~~~~~~~e~i~~~l~~~~A~~~rdalak~lY~~LF~wiV~~iN~~L~~~~~~~~~~I~iLDi~GFE~  406 (1048)
                      ||++++|..+|+++.+.+++|.+++++++++|.++||+|||+||++||+|||++||..|.+.. ....+||||||||||+
T Consensus       340 gi~~~~L~~~l~~~~~~~~~e~i~~~l~~~~a~~~rdalaK~lY~~LF~wIV~~IN~~L~~~~-~~~~~IgILDIfGFE~  418 (789)
T d1kk8a2         340 GINAGDLLKALLKPKVKVGTEMVTKGQNMNQVVNSVGALAKSLYDRMFNWLVRRVNKTLDTKA-KRNYYIGVLDIAGFEI  418 (789)
T ss_dssp             TSCHHHHHHHHHSCEEC----CEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCCEEEEEEECCCCCC
T ss_pred             CCCHHHHHCCEEEEEEECCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCEEEEEEECCCCEE
T ss_conf             999777420316777760667443379989999999999999999999999987664307777-7652788730254230


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHH
Q ss_conf             78798678998775689999999844457676653229730002336828799987309884430232235999997289
Q 001592          407 FKKNSFEQFCINYANERLQQHFNRHLFKLEQEEYELDGVDWTRVEFEDNEECLNLIEKKPLGVLSLLDEESNFPKATDLT  486 (1048)
Q Consensus       407 f~~NsfEQlciNyaNErLq~~f~~~~f~~eq~~y~~EgI~~~~i~~~dn~~~l~l~~~~p~Gll~lLdee~~~p~~td~~  486 (1048)
                      |+.|||||||||||||+||++|++++|+.||++|..|||+|..++|.||..++++++++|.|||++|||||.+|++||.+
T Consensus       419 f~~NsfEQLcINyaNEkLq~~f~~~~f~~eq~~Y~~EgI~~~~i~~~~n~~~~~~l~~~~~Gll~lLdee~~~~~~td~~  498 (789)
T d1kk8a2         419 FDFNSFEQLCINYTNERLQQFFNHHMFILEQEEYKKEGIAWEFIDFGMDLQMCIDLIEKPMGILSILEEECMFPKADDKS  498 (789)
T ss_dssp             CSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSCCCCHHHHHHHHHHHSTTSHHHHHHHHTTCTTCCHHH
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHH
T ss_conf             47686999999999999999998999999999998617785578757888999998708744788987651578887789


Q ss_pred             HHHHHHHHHCC-CCCCCCC--------CCCCEEEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHCCHHHH-HHHHCCC
Q ss_conf             99999987279-9865568--------899508872167530103102234169442999999942408899-9944133
Q 001592          487 FANKLKQHLGS-NSCFKGE--------RGRAFSIRHYAGEVPYDTNGFLEKNRDPLQTDIIQLLSSCTCQVL-QLFASKM  556 (1048)
Q Consensus       487 ~~~kl~~~~~~-~~~f~~~--------~~~~F~I~HyaG~V~Y~~~gflekN~d~l~~d~~~ll~~s~~~l~-~lf~~~~  556 (1048)
                      |++|+.+.+.+ ++.|..+        .+..|+|+||||+|.|+++||++||+|.++++++++|++|+++++ .+|.+..
T Consensus       499 ~l~kl~~~~~~~~~~~~~~~~~~~~~~~~~~F~I~HyaG~V~Y~v~gfleKN~D~l~~~l~~ll~~S~n~~i~~lf~~~~  578 (789)
T d1kk8a2         499 FQDKLYQNHMGKNRMFTKPGKPTRPNQGPAHFELHHYAGNVPYSITGWLEKNKDPINENVVALLGASKEPLVAELFKAPE  578 (789)
T ss_dssp             HHHHHHHHHTTTCSSEECCCSCSSTTCCCCSEEEEETTEEEEECCSSHHHHHSCCCCHHHHHHHHTCSSHHHHHHTCC--
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCC
T ss_conf             99999987447775535888655544688843675168854521457587603044599999999576599999852732


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHH
Q ss_conf             79999998889999876576527999999999999997025985677206999999887631146463101172388897
Q 001592          557 LKPSPKPAASSQPGALDTQKQSVGTKFKGQLFKLMHQLENTRPHFIRCIKPNSKQLPGIYEEDLVLQQFRCCGVLEIVRI  636 (1048)
Q Consensus       557 ~~~~~~~~~~~~~~~~~~~~~tv~~~fk~~L~~Lm~~L~~t~~hfIrCIkPN~~~~p~~fd~~~V~~QLr~~gile~iri  636 (1048)
                      ...+..    .+..+......||+++|+.||+.||++|++|+||||||||||+.+.|+.||..+|++||+|+||+|++++
T Consensus       579 ~~~~~~----~~~~~~~~~~~Tv~~~Fr~sL~~L~~~L~~t~~hFIRCIKPN~~k~p~~Fd~~~V~~QLr~~Gvle~vri  654 (789)
T d1kk8a2         579 EPAGGG----KKKKGKSSAFQTISAVHRESLNKLMKNLYSTHPHFVRCIIPNELKQPGLVDAELVLHQLQCNGVLEGIRI  654 (789)
T ss_dssp             --------------------CCHHHHHHHHHHHHHHHHTTEEEEEEEEECCCSSCCTTCCCHHHHHHHHTTSSSCC----
T ss_pred             CCCCCC----CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCHHHHHHH
T ss_conf             234456----7778877775308999999999999987547976999427755468756587999999986264999999


Q ss_pred             HHCCCCCCCCHHHHHHHHHCCCCCCCC--CCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH-HH
Q ss_conf             632886014446689854000232234--899589999999860889411003731136512411244655555678-89
Q 001592          637 SRSGYPTRMRHQEFAGRYGVLLSEKQL--SQDPLSISVAVLQQFNVLPEMYQVGYTKLYLRSGQLAALEDRRKQVLQ-AI  713 (1048)
Q Consensus       637 ~r~Gyp~r~~~~eF~~RY~~L~~~~~~--~~d~~~~~~~iL~~~~~~~~~y~iG~tkVflr~g~l~~LE~~r~~~~~-aa  713 (1048)
                      +++|||+|++|.+|+.||++|+|....  ..|++..|+.+|...++++.+|++|+|||||+.+.+..||..|...+. ++
T Consensus       655 rr~Gyp~R~~f~eF~~ry~~L~~~~~~~~~~~~k~~~~~il~~~~~~~~~~qiGkTkVFlr~~~~~~LE~~r~~~l~~~~  734 (789)
T d1kk8a2         655 CRKGFPSRLIYSEFKQRYSILAPNAIPQGFVDGKTVSEKILAGLQMDPAEYRLGTTKVFFKAGVLGNLEEMRDERLSKII  734 (789)
T ss_dssp             -CCCSCEEEEHHHHHHHHGGGSGGGCCC---CHHHHHHHHHHHHTCCGGGEEECSSEEEECTTHHHHHHHHHHHHHHHHH
T ss_pred             HHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHHEEECCCEEEECHHHHHHHHHHHHHHHHHHH
T ss_conf             97578740549999999987683400156788899999999966988120884388799776199999999999999999


Q ss_pred             HHHHHHHHCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999886400000021233466---9999999999899999998533
Q 001592          714 IRLQKCFRGYQARSRFRELCN---GVITLQSFARGENTRRRHASLG  756 (1048)
Q Consensus       714 i~IQ~~~Rg~~~R~~~~~~r~---a~i~iQs~~Rg~~aRk~~~~~~  756 (1048)
                      +.||++||||++|++|++++.   +++.||++||++++||+|.+++
T Consensus       735 ~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~~~~~  780 (789)
T d1kk8a2         735 SMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNWQWWK  780 (789)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
T ss_conf             9999999999999999999999999999999999999980369999
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]} Back     information, alignment and structure
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Back     information, alignment and structure
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS kinase) {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]} Back     information, alignment and structure
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]} Back     information, alignment and structure
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain {Fungus (Penicillium chrysogenum) [TaxId: 5076]} Back     information, alignment and structure
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase {Streptomyces venezuelae [TaxId: 54571]} Back     information, alignment and structure
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus voltae [TaxId: 2188]} Back     information, alignment and structure
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens), isoenzyme 6 [TaxId: 9606]} Back     information, alignment and structure
>d1ry6a_ c.37.1.9 (A:) Kinesin {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} Back     information, alignment and structure
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum [TaxId: 44689]} Back     information, alignment and structure
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain {Bacteriophage T4 [TaxId: 10665]} Back     information, alignment and structure
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292 {Aquifex aeolicus [TaxId: 63363]} Back     information, alignment and structure
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS kinase) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} Back     information, alignment and structure
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]} Back     information, alignment and structure
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Back     information, alignment and structure
>d1bifa1 c.37.1.7 (A:37-249) 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase, kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]} Back     information, alignment and structure
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide biosynthesis protein MobB {Bacillus stearothermophilus [TaxId: 1422]} Back     information, alignment and structure
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]} Back     information, alignment and structure
>d1br2a1 b.34.3.1 (A:34-79) Myosin S1 fragment, N-terminal domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]} Back     information, alignment and structure
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus) [TaxId: 10090]} Back     information, alignment and structure
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi [TaxId: 556]} Back     information, alignment and structure
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]} Back     information, alignment and structure
>d1bg2a_ c.37.1.9 (A:) Kinesin {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania major [TaxId: 5664]} Back     information, alignment and structure
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni [TaxId: 197]} Back     information, alignment and structure
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus halodurans [TaxId: 86665]} Back     information, alignment and structure
>d2ncda_ c.37.1.9 (A:) Kinesin motor Ncd (non-claret disjunctional) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Back     information, alignment and structure
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain {Lactobacillus casei [TaxId: 1582]} Back     information, alignment and structure
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR, ribosylnicotinamide kinase domain {Haemophilus influenzae [TaxId: 727]} Back     information, alignment and structure
>d1goja_ c.37.1.9 (A:) Kinesin {Neurospora crassa [TaxId: 5141]} Back     information, alignment and structure
>d2zfia1 c.37.1.9 (A:4-352) Kinesin {Mouse (Mus musculus), kif1a [TaxId: 10090]} Back     information, alignment and structure
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain {Mycoplasma pneumoniae [TaxId: 2104]} Back     information, alignment and structure
>d1x88a1 c.37.1.9 (A:18-362) Kinesin {Human (Homo sapiens), mitotic kinesin eg5 [TaxId: 9606]} Back     information, alignment and structure
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain {Staphylococcus xylosus [TaxId: 1288]} Back     information, alignment and structure
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015 {Agrobacterium tumefaciens [TaxId: 358]} Back     information, alignment and structure
>d2gnoa2 c.37.1.20 (A:11-208) gamma subunit of DNA polymerase III, N-domain {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea mays) [TaxId: 4577]} Back     information, alignment and structure
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]} Back     information, alignment and structure
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1sdma_ c.37.1.9 (A:) Kinesin heavy chain-like protein {Potato (Solanum tuberosum) [TaxId: 4113]} Back     information, alignment and structure
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure